BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046258
(900 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449439307|ref|XP_004137427.1| PREDICTED: chaperone protein ClpB1-like [Cucumis sativus]
gi|449486952|ref|XP_004157452.1| PREDICTED: chaperone protein ClpB1-like [Cucumis sativus]
Length = 908
Score = 1644 bits (4258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 806/899 (89%), Positives = 860/899 (95%), Gaps = 12/899 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNPDKFTHKTNEA+A AHELA ++GHAQ TPLHLAVAL+SDPSGI +QAI ++GGENA +
Sbjct: 1 MNPDKFTHKTNEALAGAHELALNSGHAQLTPLHLAVALVSDPSGILSQAIASSGGENAHK 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E VF +A+KKLPSQ+PAPDE+PASTTLIKVIRRAQAAQK+ GDTHLAVDQL+LGLLED
Sbjct: 61 EVETVFKRALKKLPSQSPAPDEVPASTTLIKVIRRAQAAQKSRGDTHLAVDQLVLGLLED 120
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDP 180
SQIGDL KEAGV A+VKSEVEKLRGKEG+KVESASGDTTFQALKTYGRDLVEQAGKLDP
Sbjct: 121 SQIGDLLKEAGVTTAKVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRDLVEQAGKLDP 180
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA
Sbjct: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LDMGALVAGAKYRGEFEERLKAVLKEVE+AEGKVILFIDEIHLVLGAGRTEGSMDAANLF
Sbjct: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEDAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDT+SILRGLKE+YEG
Sbjct: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKERYEG 360
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HHGVRIQDRALVVAAQLS+RYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
Sbjct: 361 HHGVRIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
MQLE+ELHALEKEKDKASKARLVEVR+ELDDLRDKLQPL+M+Y+KEKERIDEIRRLKQ+R
Sbjct: 421 MQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLLMKYRKEKERIDEIRRLKQRR 480
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAEV 540
EEL ALQEAERRYDLARAADLRYGAIQEVE+AI ++EGN +DENLMLTETVGP+Q+AEV
Sbjct: 481 EELQIALQEAERRYDLARAADLRYGAIQEVESAIARIEGN-TDENLMLTETVGPEQVAEV 539
Query: 541 VSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPTG 589
VSRWTGIPVTRLGQN+KERL+GLA +AV+AVAE+VLRSRAGLGRPQQPTG
Sbjct: 540 VSRWTGIPVTRLGQNDKERLVGLADRLHKRVVGQNQAVDAVAEAVLRSRAGLGRPQQPTG 599
Query: 590 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 649
SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG
Sbjct: 600 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 659
Query: 650 GQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 709
GQLTEAVRRRPYSV+LFDEVEKAHI+VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN
Sbjct: 660 GQLTEAVRRRPYSVILFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 719
Query: 710 LGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQ 769
LGAEHLL+G+MGK TMQVARD+V+QEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQ
Sbjct: 720 LGAEHLLAGLMGKCTMQVARDRVMQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQ 779
Query: 770 MKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEI 829
MKDVA RLAERGVALAVTDAALD VLAESYDP+YGARPIRRWLEK+VVTELSRML++EEI
Sbjct: 780 MKDVAARLAERGVALAVTDAALDYVLAESYDPVYGARPIRRWLEKRVVTELSRMLIKEEI 839
Query: 830 DENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRTDPSQAVKKMKI 888
DENSTVYIDA+ G++L YRV+KNGGFVDAATG+KSDVLIQI N PR+D +Q VKKMKI
Sbjct: 840 DENSTVYIDAAADGNSLAYRVEKNGGFVDAATGKKSDVLIQINNVPRSDAAQTVKKMKI 898
>gi|297842179|ref|XP_002888971.1| ATHSP101 [Arabidopsis lyrata subsp. lyrata]
gi|297334812|gb|EFH65230.1| ATHSP101 [Arabidopsis lyrata subsp. lyrata]
Length = 911
Score = 1636 bits (4237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 802/912 (87%), Positives = 864/912 (94%), Gaps = 13/912 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP+KFTHKTNE IA AHELA +AGHAQFTPLHLA AL+SDP+GIF QAI++AGGENAAQ
Sbjct: 1 MNPEKFTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQAISSAGGENAAQ 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
SAERV NQA+KKLPSQ+P PD+IPAS++LIKVIRRAQAAQK+ GD+HLAVDQLI+GLLED
Sbjct: 61 SAERVINQALKKLPSQSPPPDDIPASSSLIKVIRRAQAAQKSRGDSHLAVDQLIMGLLED 120
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDP 180
SQI DL E GVA ARVKSEVEKLRGKEG+KVESASGDT FQALKTYGRDLVEQAGKLDP
Sbjct: 121 SQIRDLLNEVGVATARVKSEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEQAGKLDP 180
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVP++L DVRLI+
Sbjct: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLTDVRLIS 240
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAG+TEGSMDAANLF
Sbjct: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGKTEGSMDAANLF 300
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDT+SILRGLKEKYEG
Sbjct: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEKYEG 360
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HHGVRIQDRAL+ AAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
Sbjct: 361 HHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
MQLEIELHALE+EKDKASKARL+EVRKELDDLRDKLQPL M+Y+KEKERIDEIRRLKQKR
Sbjct: 421 MQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRLKQKR 480
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAEV 540
EEL+F+LQEAERRYDLARAADLRYGAIQEVE+AI QLEG S+EN+MLTE VGP+ IAEV
Sbjct: 481 EELMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSSEENVMLTENVGPEHIAEV 540
Query: 541 VSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPTG 589
VSRWTGIPVTRLGQNEKERLIGLA +AVNAV+E++LRSRAGLGRPQQPTG
Sbjct: 541 VSRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRAGLGRPQQPTG 600
Query: 590 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 649
SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG
Sbjct: 601 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 660
Query: 650 GQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 709
GQLTEAVRRRPY V+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRN+VIIMTSN
Sbjct: 661 GQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNSVIIMTSN 720
Query: 710 LGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQ 769
LGAEHLLSG+ GKVTM+VAR+ V++EVRKHFRPELLNRLDEIVVFDPLSH+QLRKVARLQ
Sbjct: 721 LGAEHLLSGLTGKVTMEVARECVMREVRKHFRPELLNRLDEIVVFDPLSHDQLRKVARLQ 780
Query: 770 MKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEI 829
MKDVA+RLAERGVALAVTDAALD +LAESYDP+YGARPIRRW+EKKVVTELS+M+VREEI
Sbjct: 781 MKDVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRWMEKKVVTELSKMVVREEI 840
Query: 830 DENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP-RTDPSQAVKKMKI 888
DENSTVYIDA G +LVYRV+ +GG VDA+TG+KSDVLI I NGP R+D +QAVKKM+I
Sbjct: 841 DENSTVYIDAGAGGSDLVYRVE-SGGLVDASTGKKSDVLIHIANGPKRSDAAQAVKKMRI 899
Query: 889 EEIVDDDEMVDD 900
EEI DD+EMV+D
Sbjct: 900 EEIDDDEEMVED 911
>gi|225457237|ref|XP_002284179.1| PREDICTED: chaperone protein ClpB1 [Vitis vinifera]
Length = 911
Score = 1628 bits (4215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 800/899 (88%), Positives = 854/899 (94%), Gaps = 13/899 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG-ENAA 59
MNP+KFTHKTNE +A AHELA ++GHAQ TPLH+AVAL++DP+GI QAI AGG E AA
Sbjct: 1 MNPEKFTHKTNETLAGAHELAMNSGHAQLTPLHVAVALITDPNGILRQAIIGAGGNEEAA 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
S ERVFN+A+KKLPSQ+P PDEIP STTLIKV+RRAQ++QK+ GDTHLAVDQLILGLLE
Sbjct: 61 NSVERVFNKALKKLPSQSPPPDEIPVSTTLIKVVRRAQSSQKSRGDTHLAVDQLILGLLE 120
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLD 179
DSQIGDL KEAGV+ +RVKSEVEKLRGKEG+KVESASGDTTFQALKTYGRDLVEQAGKLD
Sbjct: 121 DSQIGDLLKEAGVSTSRVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRDLVEQAGKLD 180
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRDEEIRRV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA+VRLI
Sbjct: 181 PVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAEVRLI 240
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
ALDMGALVAGAKYRGEFEERLK+VLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL
Sbjct: 241 ALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 300
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDT+SILRGLKE+YE
Sbjct: 301 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKERYE 360
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
GHHGVRIQDRALVVAAQLS+RYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK
Sbjct: 361 GHHGVRIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 420
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
RMQLE+ELHALEKEKDKASKARLVEVR+ELDDLRDKLQPLMM+YKKEKERIDE+RRLKQK
Sbjct: 421 RMQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLMMKYKKEKERIDELRRLKQK 480
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAE 539
REELLFALQEAERRYDLARAADLRYGAIQEVEAAI LEG +DEN+MLTETVGP+QIAE
Sbjct: 481 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIANLEGT-TDENMMLTETVGPEQIAE 539
Query: 540 VVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGRPQQPT 588
VVSRWTGIPVTRLGQN+KERLIGLAE AV+AVAE+VLRSRAGLGRPQQPT
Sbjct: 540 VVSRWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPT 599
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH+E
Sbjct: 600 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHDE 659
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTEAVRRRPYSVVLFDEVEKAHI+VFNTLLQVLDDGRLTDGQGRTVDF NTVIIMTS
Sbjct: 660 GGQLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFTNTVIIMTS 719
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
NLGAEHLLSG++GK TMQ ARD+V+QEVR+HFRPELLNRLDEIVVFDPLSH+QLRKVARL
Sbjct: 720 NLGAEHLLSGLVGKCTMQDARDRVMQEVRRHFRPELLNRLDEIVVFDPLSHDQLRKVARL 779
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
QMKDVA RLAERG+ALAVTDAALD+VLAESYDP+YGARPIRRWLEKKVVTELS+ML+REE
Sbjct: 780 QMKDVASRLAERGIALAVTDAALDVVLAESYDPVYGARPIRRWLEKKVVTELSKMLIREE 839
Query: 829 IDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRTDPSQAVKKMK 887
IDENSTVYIDA G L YRV+ NGG V+A+TG+KSDVLI+IPNGPR+D +QAVKKMK
Sbjct: 840 IDENSTVYIDAGVSGKGLAYRVENNGGLVNASTGQKSDVLIRIPNGPRSDAAQAVKKMK 898
>gi|59805048|gb|AAX08108.1| heat shock protein 101 [Vitis vinifera]
Length = 911
Score = 1620 bits (4194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 797/899 (88%), Positives = 852/899 (94%), Gaps = 13/899 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG-ENAA 59
MNP+KFTHKTNE +A AHELA ++GHAQ TPLH+AVAL++D +GI QAI AGG E AA
Sbjct: 1 MNPEKFTHKTNETLAGAHELAMNSGHAQLTPLHVAVALITDHNGILRQAIIGAGGNEEAA 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
S ERVFN+A+KKLP+Q+P PDEIP STTLIKV+RRAQ++QK+ GDTHLAVDQLILGLLE
Sbjct: 61 NSVERVFNKALKKLPTQSPPPDEIPVSTTLIKVVRRAQSSQKSRGDTHLAVDQLILGLLE 120
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLD 179
DSQIGDL KEAGV+ +RVKSEVEKLRGKEG+KVESASGDTTFQALKTYGRDLVEQAGKLD
Sbjct: 121 DSQIGDLLKEAGVSTSRVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRDLVEQAGKLD 180
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRDEEIRRV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA+VRLI
Sbjct: 181 PVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAEVRLI 240
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
ALDMGALVAGAKYRGEFEERLK+VLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL
Sbjct: 241 ALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 300
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDT+SILRGLKE+YE
Sbjct: 301 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKERYE 360
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
GHHGVRIQDRALVVAAQLS+RYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK
Sbjct: 361 GHHGVRIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 420
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
RMQLE+ELHALEKEKDKASKARLVEVR+ELDDLRDKLQPLMM+YKKEKERIDE+RRLKQK
Sbjct: 421 RMQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLMMKYKKEKERIDELRRLKQK 480
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAE 539
REELLFALQEAERRYDLARAADLRYGAIQEVEAAI LEG +DEN+MLTETVGP+QIAE
Sbjct: 481 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIANLEGT-TDENMMLTETVGPEQIAE 539
Query: 540 VVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGRPQQPT 588
VVSRWTGIPVTRLGQN+KERLIGLAE AV+AVAE+VLRSRAGLGRPQQPT
Sbjct: 540 VVSRWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPT 599
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH+E
Sbjct: 600 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHDE 659
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTEAVRRRPYSVVLFDEVEKAHI+VFNTLLQVLDDGRLTDGQGRTVDF NTVIIMTS
Sbjct: 660 GGQLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFTNTVIIMTS 719
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
NLGAEHLLSG++GK TMQ ARD+V+QEVR+HFRPELLNRLDEIVVFDPLSH+QLRKVARL
Sbjct: 720 NLGAEHLLSGLVGKCTMQDARDRVMQEVRRHFRPELLNRLDEIVVFDPLSHDQLRKVARL 779
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
QMKDVA RLAERG+ALAVTDAALD+VLAESYDP+YGARPIRRWLEKKVVTELS+ML+REE
Sbjct: 780 QMKDVASRLAERGIALAVTDAALDVVLAESYDPVYGARPIRRWLEKKVVTELSKMLIREE 839
Query: 829 IDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRTDPSQAVKKMK 887
IDENSTVYIDA G L YRV+ NGG V+A+TG+KSDVLI+IPNG R+D +QAVKKMK
Sbjct: 840 IDENSTVYIDAGVSGKGLAYRVENNGGLVNASTGQKSDVLIRIPNGQRSDAAQAVKKMK 898
>gi|254952729|gb|ACT97165.1| heat shock protein [Vitis labrusca x Vitis vinifera]
Length = 911
Score = 1618 bits (4189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 796/899 (88%), Positives = 851/899 (94%), Gaps = 13/899 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG-ENAA 59
MNP+KFTHKTNE +A AHELA ++GHAQ TPLH+AVAL++D +GI QAI AGG E AA
Sbjct: 1 MNPEKFTHKTNETLAGAHELAMNSGHAQLTPLHVAVALITDHNGILRQAIIGAGGNEEAA 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
S ERVFN+A+KKLP+Q+P PDEIP STTLIKV+RRAQ++QK+ GDTHLAVDQLILGLLE
Sbjct: 61 NSVERVFNKALKKLPTQSPPPDEIPVSTTLIKVVRRAQSSQKSRGDTHLAVDQLILGLLE 120
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLD 179
DSQIGDL KEAGV+ +RVKSEVEKLRGKEG+KVESASGDTTFQALKTYGRDLVEQAGKLD
Sbjct: 121 DSQIGDLLKEAGVSTSRVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRDLVEQAGKLD 180
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRDEEIRRV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA+VRLI
Sbjct: 181 PVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAEVRLI 240
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
ALDMGALVAGAKYRGEFEERLK+VLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL
Sbjct: 241 ALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 300
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDT+SILRGLKE+YE
Sbjct: 301 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKERYE 360
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
GHHGVRIQDRALVVAAQLS+RYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK
Sbjct: 361 GHHGVRIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 420
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
RMQLE+ELHALEKEKDKASKARLVEVR+ELDDLRDKLQPLMM+YKKEKERIDE+RRLKQK
Sbjct: 421 RMQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLMMKYKKEKERIDELRRLKQK 480
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAE 539
REELLFALQEAERRYDLARAADLRYGAIQEVEAAI LEG +DEN+MLTETVGP+QIAE
Sbjct: 481 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIANLEGT-TDENMMLTETVGPEQIAE 539
Query: 540 VVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGRPQQPT 588
VVSRWTGIPVTRLGQN+KERLIGLAE AV+AVAE+VLRSR GLGRPQQPT
Sbjct: 540 VVSRWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRVGLGRPQQPT 599
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH+E
Sbjct: 600 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHDE 659
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTEAVRRRPYSVVLFDEVEKAHI+VFNTLLQVLDDGRLTDGQGRTVDF NTVIIMTS
Sbjct: 660 GGQLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFTNTVIIMTS 719
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
NLGAEHLLSG++GK TMQ ARD+V+QEVR+HFRPELLNRLDEIVVFDPLSH+QLRKVARL
Sbjct: 720 NLGAEHLLSGLVGKCTMQDARDRVMQEVRRHFRPELLNRLDEIVVFDPLSHDQLRKVARL 779
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
QMKDVA RLAERG+ALAVTDAALD+VLAESYDP+YGARPIRRWLEKKVVTELS+ML+REE
Sbjct: 780 QMKDVASRLAERGIALAVTDAALDVVLAESYDPVYGARPIRRWLEKKVVTELSKMLIREE 839
Query: 829 IDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRTDPSQAVKKMK 887
IDENSTVYIDA G L YRV+ NGG V+A+TG+KSDVLI+IPNG R+D +QAVKKMK
Sbjct: 840 IDENSTVYIDAGVSGKGLAYRVENNGGLVNASTGQKSDVLIRIPNGQRSDAAQAVKKMK 898
>gi|147811710|emb|CAN72669.1| hypothetical protein VITISV_012280 [Vitis vinifera]
Length = 906
Score = 1610 bits (4168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 795/899 (88%), Positives = 849/899 (94%), Gaps = 18/899 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG-ENAA 59
MNP+KFTHKTNE +A AHELA ++GHAQ TPLH+AVAL++DP+GI QAI AGG E AA
Sbjct: 1 MNPEKFTHKTNETLAGAHELAMNSGHAQLTPLHVAVALITDPNGILRQAIIGAGGNEEAA 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
S ERVFN+A+KKLPSQ+P PDEIP STTLIKV+RRAQ++QK+ GDTHLAVDQLILGLLE
Sbjct: 61 NSVERVFNKALKKLPSQSPPPDEIPVSTTLIKVVRRAQSSQKSRGDTHLAVDQLILGLLE 120
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLD 179
DSQIGDL KEAGV+ +RVKSEVEKLRGKEG+KVESASGDTTFQALKTYGRDLVEQAGKLD
Sbjct: 121 DSQIGDLLKEAGVSTSRVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRDLVEQAGKLD 180
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRDEEIRRV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA+VRLI
Sbjct: 181 PVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAEVRLI 240
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
ALDMGALVAGAKYRGEFEERLK+VLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL
Sbjct: 241 ALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 300
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDT+SILRGLKE+YE
Sbjct: 301 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKERYE 360
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
GHHGVRIQDRALVVAAQLS+RYIT DKAIDLVDEACANVRVQLDSQPEEIDNLERK
Sbjct: 361 GHHGVRIQDRALVVAAQLSSRYIT-----DKAIDLVDEACANVRVQLDSQPEEIDNLERK 415
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
RMQLE+ELHALEKEKDKASKARLVEVR+ELDDLRDKLQPLMM+YKKEKERIDE+RRLKQK
Sbjct: 416 RMQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLMMKYKKEKERIDELRRLKQK 475
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAE 539
REELLFALQEAERRYDLARAADLRYGAIQEVEAAI LEG +DEN+MLTETVGP+QIAE
Sbjct: 476 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIANLEGT-TDENMMLTETVGPEQIAE 534
Query: 540 VVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGRPQQPT 588
VVSRWTGIPVTRLGQN+KERLIGLAE AV+AVAE+VLRSRAGLGRPQQPT
Sbjct: 535 VVSRWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPT 594
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH+E
Sbjct: 595 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHDE 654
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTEAVRRRPYSVVLFDEVEKAHI+VFNTLLQVLDDGRLTDGQGRTVDF NTVIIMTS
Sbjct: 655 GGQLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFTNTVIIMTS 714
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
NLGAEHLLSG++GK TMQ ARD+V+QEVR+HFRPELLNRLDEIVVFDPLSH+QLRKVARL
Sbjct: 715 NLGAEHLLSGLVGKCTMQDARDRVMQEVRRHFRPELLNRLDEIVVFDPLSHDQLRKVARL 774
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
QMKDVA RLAERG+ALAVTDAALD+VLAESYDP+YGARPIRRWLEKKVVTELS+ML+REE
Sbjct: 775 QMKDVASRLAERGIALAVTDAALDVVLAESYDPVYGARPIRRWLEKKVVTELSKMLIREE 834
Query: 829 IDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRTDPSQAVKKMK 887
IDENSTVYIDA G L YRV+ NGG V+A+TG+KSDVLI+IPNGPR+D +QAVKKMK
Sbjct: 835 IDENSTVYIDAGVSGKGLAYRVENNGGLVNASTGQKSDVLIRIPNGPRSDAAQAVKKMK 893
>gi|18410584|ref|NP_565083.1| heat shock protein 101 [Arabidopsis thaliana]
gi|21264430|sp|P42730.2|CLPB1_ARATH RecName: Full=Chaperone protein ClpB1; AltName: Full=ATP-dependent
Clp protease ATP-binding subunit ClpB homolog 1;
AltName: Full=Casein lytic proteinase B1; AltName:
Full=Heat shock protein 101
gi|6715468|gb|AAF26423.1|AF218796_1 heat shock protein 101 [Arabidopsis thaliana]
gi|12324908|gb|AAG52410.1|AC020579_12 heat shock protein 101; 13093-16240 [Arabidopsis thaliana]
gi|332197455|gb|AEE35576.1| heat shock protein 101 [Arabidopsis thaliana]
Length = 911
Score = 1610 bits (4168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 792/899 (88%), Positives = 852/899 (94%), Gaps = 15/899 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP+KFTHKTNE IA AHELA +AGHAQFTPLHLA AL+SDP+GIF QAI++AGGENAAQ
Sbjct: 1 MNPEKFTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQAISSAGGENAAQ 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
SAERV NQA+KKLPSQ+P PD+IPAS++LIKVIRRAQAAQK+ GDTHLAVDQLI+GLLED
Sbjct: 61 SAERVINQALKKLPSQSPPPDDIPASSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGLLED 120
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDP 180
SQI DL E GVA ARVKSEVEKLRGKEG+KVESASGDT FQALKTYGRDLVEQAGKLDP
Sbjct: 121 SQIRDLLNEVGVATARVKSEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEQAGKLDP 180
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVP++L DVRLI+
Sbjct: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLTDVRLIS 240
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LDMGALVAGAKYRGEFEERLK+VLKEVE+AEGKVILFIDEIHLVLGAG+TEGSMDAANLF
Sbjct: 241 LDMGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTEGSMDAANLF 300
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDT+SILRGLKEKYEG
Sbjct: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEKYEG 360
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HHGVRIQDRAL+ AAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
Sbjct: 361 HHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
MQLEIELHALE+EKDKASKARL+EVRKELDDLRDKLQPL M+Y+KEKERIDEIRRLKQKR
Sbjct: 421 MQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRLKQKR 480
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAEV 540
EEL+F+LQEAERRYDLARAADLRYGAIQEVE+AI QLEG S+EN+MLTE VGP+ IAEV
Sbjct: 481 EELMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSSEENVMLTENVGPEHIAEV 540
Query: 541 VSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPTG 589
VSRWTGIPVTRLGQNEKERLIGLA +AVNAV+E++LRSRAGLGRPQQPTG
Sbjct: 541 VSRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRAGLGRPQQPTG 600
Query: 590 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 649
SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG
Sbjct: 601 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 660
Query: 650 GQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 709
GQLTEAVRRRPY V+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRN+VIIMTSN
Sbjct: 661 GQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNSVIIMTSN 720
Query: 710 LGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQ 769
LGAEHLL+G+ GKVTM+VARD V++EVRKHFRPELLNRLDEIVVFDPLSH+QLRKVARLQ
Sbjct: 721 LGAEHLLAGLTGKVTMEVARDCVMREVRKHFRPELLNRLDEIVVFDPLSHDQLRKVARLQ 780
Query: 770 MKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEI 829
MKDVA+RLAERGVALAVTDAALD +LAESYDP+YGARPIRRW+EKKVVTELS+M+VREEI
Sbjct: 781 MKDVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRWMEKKVVTELSKMVVREEI 840
Query: 830 DENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP-RTDPSQAVKKMK 887
DENSTVYIDA GD LVYRV+ +GG VDA+TG+KSDVLI I NGP R+D +QAVKKM+
Sbjct: 841 DENSTVYIDAGA-GD-LVYRVE-SGGLVDASTGKKSDVLIHIANGPKRSDAAQAVKKMR 896
>gi|351725607|ref|NP_001238122.1| heat shock protein [Glycine max]
gi|530207|gb|AAA66338.1| heat shock protein [Glycine max]
Length = 911
Score = 1607 bits (4162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 795/901 (88%), Positives = 848/901 (94%), Gaps = 15/901 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG-ENAA 59
MNP+KFTHKTNEA+A AHELA S+GHAQ TP+HLA AL+SDP+GIF AIN+AGG E +A
Sbjct: 1 MNPEKFTHKTNEALASAHELAMSSGHAQLTPIHLAHALISDPNGIFVLAINSAGGGEESA 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
++ ERV NQA+KKLP Q+P PDE+PAST L++ IRRAQAAQK+ GDT LAVDQLILG+LE
Sbjct: 61 RAVERVLNQALKKLPCQSPPPDEVPASTNLVRAIRRAQAAQKSRGDTRLAVDQLILGILE 120
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLD 179
DSQIGDL KEAGVAVA+V+SEV+KLRGKEG+KVESASGDT FQALKTYGRDLVEQAGKLD
Sbjct: 121 DSQIGDLLKEAGVAVAKVESEVDKLRGKEGKKVESASGDTNFQALKTYGRDLVEQAGKLD 180
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRDEEIRRVVRILSRRTKNNPVL+GEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI
Sbjct: 181 PVIGRDEEIRRVVRILSRRTKNNPVLVGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 240
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL
Sbjct: 241 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 300
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSV DT+SILRGLKE+YE
Sbjct: 301 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVVDTISILRGLKERYE 360
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
GHHGVRIQDRALV+AAQLS RYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK
Sbjct: 361 GHHGVRIQDRALVMAAQLSNRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 420
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
RMQLE+ELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMM+Y+KEKER+DEIRRLK+K
Sbjct: 421 RMQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMKYRKEKERVDEIRRLKKK 480
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAE 539
REELLFALQEAERRYDLARAADLRYGAIQEVE AI QLEG+ ++ENLMLTETVGP+QIAE
Sbjct: 481 REELLFALQEAERRYDLARAADLRYGAIQEVETAIQQLEGS-TEENLMLTETVGPEQIAE 539
Query: 540 VVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPT 588
VVSRWTGIPVTRLGQNEKERLIGL +AVNAVAE+VLRSRAGLGRPQQPT
Sbjct: 540 VVSRWTGIPVTRLGQNEKERLIGLGDRLHSRVVGQDQAVNAVAEAVLRSRAGLGRPQQPT 599
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
GSFLFLGPTGVGKTELAKALAEQLFD+EN LVRIDMSEYMEQHSVSRLIGAPPGYVGHEE
Sbjct: 600 GSFLFLGPTGVGKTELAKALAEQLFDNENQLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 659
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTEAVRRRPYSVVLFDEVEKAH SVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS
Sbjct: 660 GGQLTEAVRRRPYSVVLFDEVEKAHTSVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 719
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
NLGAEHLLSG+ GK TMQVARD+V+QEVR+ FRPELLNRLDEIVVFDPLSH+QLRKVARL
Sbjct: 720 NLGAEHLLSGLSGKCTMQVARDRVMQEVRRQFRPELLNRLDEIVVFDPLSHDQLRKVARL 779
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
QMKDVA RLAE+G+ALAVTDAALD +L+ESYDP+YGARPIRRWLEKKVVTELSRMLVREE
Sbjct: 780 QMKDVASRLAEKGIALAVTDAALDYILSESYDPVYGARPIRRWLEKKVVTELSRMLVREE 839
Query: 829 IDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNG--PRTDPSQAVKKM 886
IDENSTVYIDA P G LVYRV+KNGG V+ TG+KSD+LIQIPNG P+TD QAVKKM
Sbjct: 840 IDENSTVYIDAGPNGGELVYRVEKNGGVVNPTTGQKSDILIQIPNGHAPKTDAVQAVKKM 899
Query: 887 K 887
K
Sbjct: 900 K 900
>gi|537446|gb|AAA67927.1| AtHSP101 [Arabidopsis thaliana]
Length = 911
Score = 1606 bits (4159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 791/899 (87%), Positives = 851/899 (94%), Gaps = 15/899 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP+KFTHKTNE IA AHELA +AGHAQFTPLHLA AL+SDP+GIF QAI++AGGENAAQ
Sbjct: 1 MNPEKFTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQAISSAGGENAAQ 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
SAERV NQA+KKLPSQ+P PD+IPAS++LIKVIRRAQAAQK+ GDTHLAVDQLI+GLLED
Sbjct: 61 SAERVINQALKKLPSQSPPPDDIPASSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGLLED 120
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDP 180
SQI DL E GVA ARVKSEVEKLRGKEG+KVESASGDT FQALKTYGRDLVEQAGKLDP
Sbjct: 121 SQIRDLLNEVGVATARVKSEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEQAGKLDP 180
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVP++L DVRLI+
Sbjct: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLTDVRLIS 240
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LDMGALVAGAKYRGEFEERLK+VLKEVE+AEGKVILFIDEIHLVLGAG+TEGSMDAANLF
Sbjct: 241 LDMGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTEGSMDAANLF 300
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDT+SILRGLKEKYEG
Sbjct: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEKYEG 360
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HHGVRIQDRAL+ AAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
Sbjct: 361 HHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
MQLEIELHALE+EKDKASKARL+EVRKELDDLRDKLQPL M+Y+KEKERIDEIRRLKQKR
Sbjct: 421 MQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRLKQKR 480
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAEV 540
EEL+F+LQEAERRYDLARAADLRYGAIQEVE+AI QLEG S+EN+MLTE VGP+ IAEV
Sbjct: 481 EELMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSSEENVMLTENVGPEHIAEV 540
Query: 541 VSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPTG 589
VSRWTGIPVTRLGQNEKERLIGLA +AVNAV+E++LRSRAGLGR QQPTG
Sbjct: 541 VSRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRAGLGRAQQPTG 600
Query: 590 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 649
SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG
Sbjct: 601 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 660
Query: 650 GQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 709
GQLTEAVRRRPY V+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRN+VIIMTSN
Sbjct: 661 GQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNSVIIMTSN 720
Query: 710 LGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQ 769
LGAEHLL+G+ GKVTM+VARD V++EVRKHFRPELLNRLDEIVVFDPLSH+QLRKVARLQ
Sbjct: 721 LGAEHLLAGLTGKVTMEVARDCVMREVRKHFRPELLNRLDEIVVFDPLSHDQLRKVARLQ 780
Query: 770 MKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEI 829
MKDVA+RLAERGVALAVTDAALD +LAESYDP+YGARPIRRW+EKKVVTELS+M+VREEI
Sbjct: 781 MKDVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRWMEKKVVTELSKMVVREEI 840
Query: 830 DENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP-RTDPSQAVKKMK 887
DENSTVYIDA GD LVYRV+ +GG VDA+TG+KSDVLI I NGP R+D +QAVKKM+
Sbjct: 841 DENSTVYIDAGA-GD-LVYRVE-SGGLVDASTGKKSDVLIHIANGPKRSDAAQAVKKMR 896
>gi|224130056|ref|XP_002328643.1| predicted protein [Populus trichocarpa]
gi|222838819|gb|EEE77170.1| predicted protein [Populus trichocarpa]
Length = 914
Score = 1598 bits (4139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 798/914 (87%), Positives = 854/914 (93%), Gaps = 15/914 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG-GENAA 59
M+P KFTHKTNEA+A AHELA AGHAQ TPLHLAVAL+SDPSGI QA+ NAG GEN A
Sbjct: 1 MDPGKFTHKTNEALATAHELAVGAGHAQITPLHLAVALISDPSGILRQAVANAGDGENTA 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
Q+AERVFNQ +KKLPSQ+P P+E+P ST+LIKVIRR+QA QK+ GD++LAVDQ+ILGLLE
Sbjct: 61 QAAERVFNQVLKKLPSQSPPPEEVPPSTSLIKVIRRSQALQKSRGDSYLAVDQMILGLLE 120
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLD 179
DSQI DL KE GV+ + VKSEVEKLRGKEG+KVE+ASGDT FQALKTYGRDLVE AGKLD
Sbjct: 121 DSQIRDLLKEVGVSASTVKSEVEKLRGKEGKKVENASGDTNFQALKTYGRDLVEGAGKLD 180
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAV EGLAQRIVRGDVPSNLADVRLI
Sbjct: 181 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVAEGLAQRIVRGDVPSNLADVRLI 240
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL
Sbjct: 241 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 300
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDT+SILRGLKEKYE
Sbjct: 301 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEKYE 360
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
GHHGVRIQDRALVVAAQLS+RYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID+LERK
Sbjct: 361 GHHGVRIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDSLERK 420
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
RMQLE+ELHALEKEKDKASKARL EV KELDDLRDKLQPL+M+YKKEKERIDEIRRLKQK
Sbjct: 421 RMQLEVELHALEKEKDKASKARLAEVVKELDDLRDKLQPLLMKYKKEKERIDEIRRLKQK 480
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAE 539
REE+ F++QEAERRYDLAR ADLRYGA++EVEAAI +LEG+ +DENLMLTETVGP+ IAE
Sbjct: 481 REEIHFSIQEAERRYDLARVADLRYGALEEVEAAIARLEGSTTDENLMLTETVGPEHIAE 540
Query: 540 VVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPT 588
VVSRWTGIPVTRLGQNEKERLIGLA +AVNAVAE+VLRSRAGLGRPQQPT
Sbjct: 541 VVSRWTGIPVTRLGQNEKERLIGLADRLHHRVVGQDQAVNAVAEAVLRSRAGLGRPQQPT 600
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
GSFLFLGPTGVGKTELAK LAEQLFD+EN LVRIDMSEYMEQHSVSRLIGAPPGYVGHEE
Sbjct: 601 GSFLFLGPTGVGKTELAKTLAEQLFDNENQLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 660
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS
Sbjct: 661 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 720
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
NLGAEHLLSG++GK +MQVARD+V+QEVRK FRPELLNRLDEIVVFDPLSH+QLRKVARL
Sbjct: 721 NLGAEHLLSGLLGKCSMQVARDRVMQEVRKQFRPELLNRLDEIVVFDPLSHDQLRKVARL 780
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
QMKDVA RLAERG+ALAVTDAALD +LAESYDP+YGARPIRRWLE+KVVTELSRMLVREE
Sbjct: 781 QMKDVASRLAERGIALAVTDAALDYILAESYDPVYGARPIRRWLERKVVTELSRMLVREE 840
Query: 829 IDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRTDPSQAVKKMKI 888
IDENSTVYIDA P G +LVYRV+KNGG V+A TG+K+DVLIQIP PR D +Q VKKMKI
Sbjct: 841 IDENSTVYIDAGPDGQDLVYRVEKNGGLVNATTGQKTDVLIQIPKAPRDDAAQKVKKMKI 900
Query: 889 EEIV---DDDEMVD 899
+EIV DDDEM++
Sbjct: 901 QEIVDNDDDDEMIE 914
>gi|255547217|ref|XP_002514666.1| chaperone clpb, putative [Ricinus communis]
gi|223546270|gb|EEF47772.1| chaperone clpb, putative [Ricinus communis]
Length = 912
Score = 1596 bits (4133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 780/907 (85%), Positives = 854/907 (94%), Gaps = 11/907 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P KFTHKTNEA+A AHELA SAGHAQ TPLHLAVAL++DP+ IF+QAI+NAGGE+A+Q
Sbjct: 1 MDPGKFTHKTNEALASAHELAISAGHAQLTPLHLAVALITDPNAIFSQAISNAGGESASQ 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+A+RV N A+KKLPSQ+P PDEIP ST+LIKVIRRAQA QK+ GD+HLAVDQLILGLLED
Sbjct: 61 AAQRVLNNAIKKLPSQSPPPDEIPPSTSLIKVIRRAQALQKSRGDSHLAVDQLILGLLED 120
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDP 180
SQIGDL KE+G+A +VKSEVEKLRGKEG+KVESA+ DT FQALKTYGRDLVEQAGKLDP
Sbjct: 121 SQIGDLLKESGIAAGKVKSEVEKLRGKEGKKVESATADTNFQALKTYGRDLVEQAGKLDP 180
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP+NL DVRLIA
Sbjct: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPNNLNDVRLIA 240
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LDMGALVAGAKYRGEFEERLKAVLKEVEEA+GKVILFIDEIHLVLGAGRTEGSMDAANLF
Sbjct: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEADGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYV+EPSV DT++ILRGLKEKYEG
Sbjct: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVSEPSVVDTINILRGLKEKYEG 360
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HHGVRI DRALVVAAQLS+RYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK+
Sbjct: 361 HHGVRILDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKK 420
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
+QLE+E HALEKEKDKASKARL EV KELDDLRDKLQPL+M+YKKEKERIDEIRRLKQKR
Sbjct: 421 IQLEVEHHALEKEKDKASKARLSEVVKELDDLRDKLQPLIMKYKKEKERIDEIRRLKQKR 480
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAEV 540
EE+ FA+QEAERRYDLAR ADL+YGA++EV+AAI +LEG+ +DENLMLTETV P+ IAEV
Sbjct: 481 EEIQFAIQEAERRYDLARVADLKYGALEEVDAAIARLEGSSTDENLMLTETVKPEHIAEV 540
Query: 541 VSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGRPQQPTG 589
VSRWTGIPVTRLGQNEKERLIGLAE AV+AVAE+VLRSRAGLGRPQQPTG
Sbjct: 541 VSRWTGIPVTRLGQNEKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPTG 600
Query: 590 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 649
SFLFLGPTGVGKTELAKALAEQLFDDEN +VRIDMSEYMEQHSVSRLIGAPPGYVGHEEG
Sbjct: 601 SFLFLGPTGVGKTELAKALAEQLFDDENQMVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 660
Query: 650 GQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 709
GQLTEAVRRRPYSVVLFDEVEKAH+SVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN
Sbjct: 661 GQLTEAVRRRPYSVVLFDEVEKAHLSVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 720
Query: 710 LGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQ 769
LGAEHLLSG+ GK +++ ARD+V+ EVRKHFRPELLNRLDEIVVFDPLSH+QL+KVARLQ
Sbjct: 721 LGAEHLLSGLTGKTSIEAARDRVMLEVRKHFRPELLNRLDEIVVFDPLSHDQLKKVARLQ 780
Query: 770 MKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEI 829
MKDVA+RLAE G+ALAVTDAALD +LAESY+P+YGARPIRRWLEKKVVT+LSRML+REEI
Sbjct: 781 MKDVALRLAEMGIALAVTDAALDYILAESYNPVYGARPIRRWLEKKVVTQLSRMLLREEI 840
Query: 830 DENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRTDPSQAVKKMKIE 889
DEN+TVYIDA+ D+L YRV+KNGG V+AATGRK++VLIQIP+ P++D +QAVKKM+IE
Sbjct: 841 DENTTVYIDAASNQDDLDYRVEKNGGLVNAATGRKAEVLIQIPSVPKSDAAQAVKKMRIE 900
Query: 890 EIVDDDE 896
EIVD+DE
Sbjct: 901 EIVDNDE 907
>gi|11561806|gb|AAC83688.2| 101 kDa heat shock protein [Nicotiana tabacum]
Length = 909
Score = 1573 bits (4072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 780/899 (86%), Positives = 841/899 (93%), Gaps = 13/899 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG-ENAA 59
MNP+KFTHKTNEA+A A ELA SAGHAQFTPLH+AVAL+SD +GIF QAI NAGG E A
Sbjct: 1 MNPEKFTHKTNEALAGALELALSAGHAQFTPLHMAVALISDHNGIFRQAIVNAGGNEEVA 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
S ERV NQAMKKLPSQTPAPDEIP ST+LIKV+RRAQ++QK+ GD+HLAVDQLILGLLE
Sbjct: 61 NSVERVLNQAMKKLPSQTPAPDEIPPSTSLIKVLRRAQSSQKSRGDSHLAVDQLILGLLE 120
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLD 179
DSQIGDL KEAGV+ +RVKSEVEKLRGKEGRKVESASGDTTFQAL TYGRDLVEQAGKLD
Sbjct: 121 DSQIGDLLKEAGVSASRVKSEVEKLRGKEGRKVESASGDTTFQALNTYGRDLVEQAGKLD 180
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI
Sbjct: 181 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 240
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL
Sbjct: 241 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 300
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV DT+SILRGLKE+YE
Sbjct: 301 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTISILRGLKERYE 360
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
GHHGV+IQDRALVVAAQLS+RYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK
Sbjct: 361 GHHGVKIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 420
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
R+QLE+ELHALEKEKDKASKARL+EVRKELDDLRDKLQPLMMRYKKEKERIDE+RRLKQK
Sbjct: 421 RIQLEVELHALEKEKDKASKARLIEVRKELDDLRDKLQPLMMRYKKEKERIDELRRLKQK 480
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAE 539
R+EL++ALQEAERRYDLARAADLRYGAIQEVE AI LE + S E+ MLTETVGPDQIAE
Sbjct: 481 RDELIYALQEAERRYDLARAADLRYGAIQEVETAIANLE-STSAESTMLTETVGPDQIAE 539
Query: 540 VVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGRPQQPT 588
VVSRWTGIPV+RLGQNEKE+LIGL + AV AVAE+VLRSRAGLGRPQQPT
Sbjct: 540 VVSRWTGIPVSRLGQNEKEKLIGLGDRLHQRVVGQDHAVRAVAEAVLRSRAGLGRPQQPT 599
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
GSFLFLGPTGVGKTELAKALAEQLFDD+ L++RIDMSEYMEQHSVSRLIGAPPGYVGH+E
Sbjct: 600 GSFLFLGPTGVGKTELAKALAEQLFDDDKLMIRIDMSEYMEQHSVSRLIGAPPGYVGHDE 659
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTEAVRRRPYSVVLFDEVEKAH +VFNTLLQVLDDGRLTDGQGRTVDF N+VIIMTS
Sbjct: 660 GGQLTEAVRRRPYSVVLFDEVEKAHPAVFNTLLQVLDDGRLTDGQGRTVDFTNSVIIMTS 719
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
NLGAE+LLSG+MGK TM+ AR+ V+QEVRK F+PELLNRLDEIVVFDPLSH+QLR+V R
Sbjct: 720 NLGAEYLLSGLMGKCTMETAREMVMQEVRKQFKPELLNRLDEIVVFDPLSHKQLRQVCRY 779
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
QMKDVA+RLAERG+AL VT+AA D++L ESYDP+YGARPIRRWLE+KVVTELS+MLV+EE
Sbjct: 780 QMKDVALRLAERGIALGVTEAAPDVILTESYDPVYGARPIRRWLERKVVTELSKMLVKEE 839
Query: 829 IDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRTDPSQAVKKMK 887
IDENSTVYIDA G +L YRV+KNGG V+AATG+KSD+LIQ+PNGPR+D QAVKKM+
Sbjct: 840 IDENSTVYIDAGVSGKDLTYRVEKNGGLVNAATGQKSDILIQLPNGPRSDAVQAVKKMR 898
>gi|297733886|emb|CBI15133.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 1552 bits (4019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 774/899 (86%), Positives = 826/899 (91%), Gaps = 43/899 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG-ENAA 59
MNP+KFTHKTNE +A AHELA ++GHAQ TPLH+AVAL++DP+GI QAI AGG E AA
Sbjct: 1 MNPEKFTHKTNETLAGAHELAMNSGHAQLTPLHVAVALITDPNGILRQAIIGAGGNEEAA 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
S ERVFN+A+KKLPSQT Q++QK+ GDTHLAVDQLILGLLE
Sbjct: 61 NSVERVFNKALKKLPSQT-------------------QSSQKSRGDTHLAVDQLILGLLE 101
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLD 179
DSQIGDL KEAGV+ +RVKSEVEKLRGKEG+K ALKTYGRDLVEQAGKLD
Sbjct: 102 DSQIGDLLKEAGVSTSRVKSEVEKLRGKEGKK-----------ALKTYGRDLVEQAGKLD 150
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRDEEIRRV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA+VRLI
Sbjct: 151 PVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAEVRLI 210
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
ALDMGALVAGAKYRGEFEERLK+VLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL
Sbjct: 211 ALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 270
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDT+SILRGLKE+YE
Sbjct: 271 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKERYE 330
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
GHHGVRIQDRALVVAAQLS+RYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK
Sbjct: 331 GHHGVRIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 390
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
RMQLE+ELHALEKEKDKASKARLVEVR+ELDDLRDKLQPLMM+YKKEKERIDE+RRLKQK
Sbjct: 391 RMQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLMMKYKKEKERIDELRRLKQK 450
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAE 539
REELLFALQEAERRYDLARAADLRYGAIQEVEAAI LEG +DEN+MLTETVGP+QIAE
Sbjct: 451 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIANLEGT-TDENMMLTETVGPEQIAE 509
Query: 540 VVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGRPQQPT 588
VVSRWTGIPVTRLGQN+KERLIGLAE AV+AVAE+VLRSRAGLGRPQQPT
Sbjct: 510 VVSRWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPT 569
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH+E
Sbjct: 570 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHDE 629
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTEAVRRRPYSVVLFDEVEKAHI+VFNTLLQVLDDGRLTDGQGRTVDF NTVIIMTS
Sbjct: 630 GGQLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFTNTVIIMTS 689
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
NLGAEHLLSG++GK TMQ ARD+V+QEVR+HFRPELLNRLDEIVVFDPLSH+QLRKVARL
Sbjct: 690 NLGAEHLLSGLVGKCTMQDARDRVMQEVRRHFRPELLNRLDEIVVFDPLSHDQLRKVARL 749
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
QMKDVA RLAERG+ALAVTDAALD+VLAESYDP+YGARPIRRWLEKKVVTELS+ML+REE
Sbjct: 750 QMKDVASRLAERGIALAVTDAALDVVLAESYDPVYGARPIRRWLEKKVVTELSKMLIREE 809
Query: 829 IDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRTDPSQAVKKMK 887
IDENSTVYIDA G L YRV+ NGG V+A+TG+KSDVLI+IPNGPR+D +QAVKKMK
Sbjct: 810 IDENSTVYIDAGVSGKGLAYRVENNGGLVNASTGQKSDVLIRIPNGPRSDAAQAVKKMK 868
>gi|162458166|ref|NP_001104935.1| heat-shock protein 101 [Zea mays]
gi|4584957|gb|AAD25223.1|AF077337_1 heat shock protein 101 [Zea mays]
gi|4928488|gb|AAD33606.1|AF133840_1 heat shock protein HSP101 [Zea mays]
Length = 912
Score = 1543 bits (3995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 762/902 (84%), Positives = 829/902 (91%), Gaps = 15/902 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNPD FTHKTNEAI AHE+A AGHAQ TPLHLA L +D GI QAI A G + A
Sbjct: 1 MNPDNFTHKTNEAIVGAHEIAVEAGHAQLTPLHLAAVLAADKGGILRQAITGASGGDGAA 60
Query: 61 SA--ERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
ERV N ++KKLPSQ+P PD +PAST LIKVIRRAQ+AQK GD+HLAVDQL+LGLL
Sbjct: 61 GDSFERVLNNSLKKLPSQSPPPDSVPASTALIKVIRRAQSAQKKRGDSHLAVDQLLLGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
EDSQI D KEAGV+ ARV++E+EKLRG EGR+VESASGDT FQALKTYGRDLVEQAGKL
Sbjct: 121 EDSQISDCLKEAGVSAARVRAELEKLRGGEGRRVESASGDTNFQALKTYGRDLVEQAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSVPDTVSILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTVSILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALVVAAQLSARYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+ELHALEKEKDKASKARL+EVRKELDDLRDKLQPL M+Y+KEKERIDEIR+LKQ
Sbjct: 421 KRIQLEVELHALEKEKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADL+YGA+QE++AAI +LE +++ ENLMLTETVGP+QIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLKYGALQEIDAAISKLE-SETGENLMLTETVGPEQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQN+KERL+GLA EAV+AVAE+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQTEAVSAVAEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGAEHLL+GM+GK +M+VARD V+QEVR+HFRPELLNRLDEIV+FDPLSHEQLRKVAR
Sbjct: 720 SNLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVAR 779
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA+RLAERG+ALAVTDAALDI+L+ SYDP+YGARPIRRW+EK+VVT+LS+ML++E
Sbjct: 780 LQMKDVAVRLAERGIALAVTDAALDIILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQE 839
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP-RTDPSQAVKKM 886
EIDEN TVYIDA+P D LVYRV ++GG V+A TG KSD+LIQ+PN R+D +QAVKKM
Sbjct: 840 EIDENCTVYIDAAPGKDELVYRVDRSGGLVNAETGMKSDILIQVPNSSTRSDAAQAVKKM 899
Query: 887 KI 888
+I
Sbjct: 900 RI 901
>gi|223975969|gb|ACN32172.1| unknown [Zea mays]
gi|413946195|gb|AFW78844.1| heat-shock protein 101 [Zea mays]
Length = 912
Score = 1541 bits (3990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 761/902 (84%), Positives = 829/902 (91%), Gaps = 15/902 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNPD FTHKTNEAI AHE+A AGHAQ TPLHLA L +D GI QAI A G + A
Sbjct: 1 MNPDNFTHKTNEAIVGAHEIAVEAGHAQLTPLHLAAVLAADKGGILRQAITGASGGDGAA 60
Query: 61 SA--ERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
ERV N ++KKLPSQ+P PD +PAST LIKVIRRAQ+AQK GD+HLAVDQL+LGLL
Sbjct: 61 GDSFERVLNNSLKKLPSQSPPPDSVPASTALIKVIRRAQSAQKKRGDSHLAVDQLLLGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
EDSQI D KEAGV+ ARV++E+EKLRG EGR+VESASGDT FQALKTYGRDLVEQAGKL
Sbjct: 121 EDSQISDCLKEAGVSAARVRAELEKLRGGEGRRVESASGDTNFQALKTYGRDLVEQAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSVPDTVSILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTVSILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALVVAAQLSARYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+ELHALEKEKDKASKARL+EVRKELDDLRDKLQPL M+Y+KEKERIDEIR+LKQ
Sbjct: 421 KRIQLEVELHALEKEKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADL+YGA+QE++AAI +LE +++ ENLMLTETVGP+QIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLKYGALQEIDAAISKLE-SETGENLMLTETVGPEQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQN+KERL+GLA EAV+AVAE+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQTEAVSAVAEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGAEHLL+GM+GK +M+VARD V+QEVR+HFRPELLNRLDEIV+FDPLSHEQLRKVAR
Sbjct: 720 SNLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVAR 779
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA+RLAERG+ALAVTDAALDI+L+ SYDP+YGARPIRRW+EK+VVT+LS+ML++E
Sbjct: 780 LQMKDVAVRLAERGIALAVTDAALDIILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQE 839
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIP-NGPRTDPSQAVKKM 886
EIDEN TVYIDA+P D LVYRV ++GG V+A TG KSD+LIQ+P + R+D +QAVKKM
Sbjct: 840 EIDENCTVYIDAAPGKDELVYRVDRSGGLVNAETGMKSDILIQVPTSSTRSDAAQAVKKM 899
Query: 887 KI 888
+I
Sbjct: 900 RI 901
>gi|110623255|emb|CAI94866.2| heat shock protein 101 [Triticum durum]
Length = 913
Score = 1535 bits (3973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 762/902 (84%), Positives = 829/902 (91%), Gaps = 16/902 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGEN--A 58
MNPDKFTHKTNEA+A AHE+A+ AGH Q TPLHLA AL +D SGI QAI +A G N A
Sbjct: 1 MNPDKFTHKTNEALAAAHEMASEAGHPQLTPLHLAAALAADRSGILRQAIAHASGGNDAA 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A S ERV + A+K+LPSQ+P PD +PAST+L+K +RRAQ+AQK+ GD+HLAVDQL++GLL
Sbjct: 61 ADSFERVASAALKRLPSQSPPPDTVPASTSLVKAVRRAQSAQKSRGDSHLAVDQLLMGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
ED+QI D KEAG++ ARVK+EVEKLRG + R+VESASGDT FQALKTYGRDLVE AGKL
Sbjct: 121 EDAQISDALKEAGISAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQR+VRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
+ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 VALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSVPDTVSILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTVSILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALV+AAQLS+RYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVIAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+ELHALEKEKDKASKARLV+VRKELDDLRDKLQPL M+Y+KEKERIDEIR LKQ
Sbjct: 421 KRIQLEVELHALEKEKDKASKARLVDVRKELDDLRDKLQPLQMKYRKEKERIDEIRSLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADLRYGA+QEV+AAI +LEG ++ ENLMLTETVGPDQIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLRYGALQEVDAAIAKLEG-ETGENLMLTETVGPDQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQNEK RLIGLA EAVNAV E+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSVVLFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVVLFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGAEHLL+GM+G +M+VARD V+QEVR+HFRPELLNRLDEIV+FDPLSHEQLRKVAR
Sbjct: 720 SNLGAEHLLAGMVGS-SMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVAR 778
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA+RLAERGVALAVTDAALD++L+ SYDP+YGARPIRRW+EK++VTELS+ML+RE
Sbjct: 779 LQMKDVAVRLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRIVTELSKMLIRE 838
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP-RTDPSQAVKKM 886
EIDENSTVYIDA+P D L Y V K+GG V+A TG KSD+LIQ+PNG D + AVKKM
Sbjct: 839 EIDENSTVYIDAAPSKDELTYGVDKHGGLVNARTGHKSDILIQVPNGAVGGDAAHAVKKM 898
Query: 887 KI 888
KI
Sbjct: 899 KI 900
>gi|242091131|ref|XP_002441398.1| hypothetical protein SORBIDRAFT_09g025900 [Sorghum bicolor]
gi|241946683|gb|EES19828.1| hypothetical protein SORBIDRAFT_09g025900 [Sorghum bicolor]
Length = 913
Score = 1534 bits (3972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 760/902 (84%), Positives = 833/902 (92%), Gaps = 15/902 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MNPD FTHKTNEA+ AHE+A+ AGHAQ TPLHLA AL +D GI QAI A G + A
Sbjct: 1 MNPDNFTHKTNEALVAAHEMASEAGHAQLTPLHLAAALAADKGGILRQAITGASGGDGAA 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+S ERV + A+KKLPSQ+P PD +PAST LIKVIRRAQ+AQK GD+HLAVDQL+LGL+
Sbjct: 61 GESFERVLSNALKKLPSQSPPPDSVPASTALIKVIRRAQSAQKKRGDSHLAVDQLLLGLV 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
EDSQI D KEAGV+ ARV++E+EKLRG EGR+VESASGDT FQALKTYGRDLVEQAGKL
Sbjct: 121 EDSQISDCLKEAGVSAARVRAELEKLRGGEGRRVESASGDTNFQALKTYGRDLVEQAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGALVAGAKYRGEFEERLK+VLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 IALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSVPDT+SILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALVVAAQLSARYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+ELHALEKEKDKASKARLVEV+KELDDLRDKLQPL M+Y+KEKERIDEIR+LKQ
Sbjct: 421 KRIQLEVELHALEKEKDKASKARLVEVKKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F+LQEAERR DLAR ADL+YGA+QE++AAI +LE +++ ENLMLTETVGP+QIA
Sbjct: 481 RREELQFSLQEAERRMDLARVADLKYGALQEIDAAISKLE-SETGENLMLTETVGPEQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQN+KERL+GLA EAVNAVAE+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQTEAVNAVAEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGAEHLL+GM+GK +M+VARD V+QEVR+HFRPELLNRLDEIV+FDPLSHEQLRKVAR
Sbjct: 720 SNLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVAR 779
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA+RLAERG+ALAVTDAALDI+L+ SYDP+YGARPIRRW+EK+VVT+LS+ML++E
Sbjct: 780 LQMKDVAVRLAERGIALAVTDAALDIILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQE 839
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPN-GPRTDPSQAVKKM 886
EIDEN TVYIDA+P D L YRV ++GG V+A TG KSD+LIQ+PN R+D +QAVKKM
Sbjct: 840 EIDENCTVYIDAAPAKDELAYRVDRSGGLVNAETGLKSDILIQVPNDAVRSDAAQAVKKM 899
Query: 887 KI 888
+I
Sbjct: 900 RI 901
>gi|357132932|ref|XP_003568082.1| PREDICTED: chaperone protein ClpB1-like [Brachypodium distachyon]
Length = 912
Score = 1533 bits (3970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 757/912 (83%), Positives = 831/912 (91%), Gaps = 18/912 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGEN--A 58
MNPD FTHKTNEA+ AHE A+ AGHAQ TPLHLA +L D SGI QAI A G + A
Sbjct: 1 MNPDNFTHKTNEALVAAHEAASEAGHAQITPLHLAASLAGDKSGILRQAIAQASGGDPAA 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
S ERV + A+KKLPSQ+P PD +PAST LIK IRRAQ+AQK GD+HLAVDQL+LGLL
Sbjct: 61 GDSFERVLSGALKKLPSQSPPPDSVPASTALIKAIRRAQSAQKKRGDSHLAVDQLLLGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
EDSQI D KEAGV+ +RV++E+EKLRG + RKVESASGDT FQALKTYGRDLVEQAGKL
Sbjct: 121 EDSQISDCLKEAGVSASRVRAELEKLRGGDSRKVESASGDTNFQALKTYGRDLVEQAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV DT+SILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTISILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRA+VVAAQLS+RYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRAIVVAAQLSSRYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+ELHALEKEKDKASKARLVEVRKELDDLRDKLQPL M+Y+KEKERIDEIR+LKQ
Sbjct: 421 KRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADL+YGA+ E++AAI +LEG ++ ENLMLTETVGP+QIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLKYGALMEIDAAIAKLEG-ETGENLMLTETVGPEQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQN+KERL+G+A EAVNAVAE+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGAEHLL+GM+GK +M+VARD V+QEVR+HFRPELLNRLDEIVVFDPLSHEQLRKVAR
Sbjct: 720 SNLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVVFDPLSHEQLRKVAR 779
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA+RLAERG+ALAVTDAALD++L+ +YDP+YGARPIRRW+EK+VVT+LS+ML++E
Sbjct: 780 LQMKDVAVRLAERGIALAVTDAALDVILSLAYDPVYGARPIRRWIEKRVVTQLSKMLIQE 839
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP--RTDPSQAVKK 885
EIDEN TVYIDAS D L YRV ++GG V+A TG++SD+LIQ+PNG + +QAVKK
Sbjct: 840 EIDENCTVYIDASANKDELAYRVDRSGGLVNAETGQRSDILIQVPNGAVGGGEAAQAVKK 899
Query: 886 MKI--EEIVDDD 895
M+I E+ +D+D
Sbjct: 900 MRIMEEDGMDED 911
>gi|340812276|gb|AEK76075.1| Hsp101 [Saccharum hybrid cultivar SP80-3280]
Length = 912
Score = 1533 bits (3969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 755/902 (83%), Positives = 827/902 (91%), Gaps = 15/902 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNPD FTHKTNEA+ AHE A+ AGHAQ TPLHLA AL++D GI QAI A G + A
Sbjct: 1 MNPDNFTHKTNEALVAAHEAASEAGHAQLTPLHLAAALVADKGGILRQAITGASGGDGAA 60
Query: 61 SA--ERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
ERV ++A+KKLPSQ+P PD +PAST LIK IRRAQ+AQK GD+HLAVDQL+LGLL
Sbjct: 61 GDSFERVLSKALKKLPSQSPPPDSVPASTALIKAIRRAQSAQKKRGDSHLAVDQLLLGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
EDSQI D KEAGV+ ARV++E+EKLRG GR+VESASGDT FQALKTYGRDLVEQAGKL
Sbjct: 121 EDSQISDCLKEAGVSAARVRAELEKLRGGGGRRVESASGDTNFQALKTYGRDLVEQAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGALVAGAKYRGEFEERLK+VLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 IALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSVPDT+SILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALVVAAQLSARYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+ELHALEKEKDKASKARLVEV+KELDDLRDKLQPL M+Y+KEKERIDEIR+LKQ
Sbjct: 421 KRIQLEVELHALEKEKDKASKARLVEVKKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADL+YGA+QE++AAI +LE +++ ENLMLTETVGP+QIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLKYGALQEIDAAIAKLE-SETGENLMLTETVGPEQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQN+KERL+GLA EAVNAVAE+VLRS+AGLGRPQQ
Sbjct: 540 EVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQTEAVNAVAEAVLRSKAGLGRPQQS 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKA AEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKAFAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGAEHLL+GM+GK +M+VARD V+QEVR+HFRPELLNRLDEIV+FDPLSHEQLRKVAR
Sbjct: 720 SNLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVAR 779
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA+RLAERG+ALAVTDAALDI+L+ SYDP+YGARPIRRW+EK+VVT+LS+ML++E
Sbjct: 780 LQMKDVAVRLAERGIALAVTDAALDIILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQE 839
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPN-GPRTDPSQAVKKM 886
EIDEN TVYIDA+P D L YRV ++GG V+A TG KSD+LIQ+PN R+D +QAVKKM
Sbjct: 840 EIDENCTVYIDAAPAKDELAYRVDRSGGLVNAETGLKSDILIQVPNDAVRSDAAQAVKKM 899
Query: 887 KI 888
+I
Sbjct: 900 RI 901
>gi|6013196|gb|AAF01280.1|AF174433_1 heat shock protein 101 [Triticum aestivum]
Length = 913
Score = 1531 bits (3965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 764/914 (83%), Positives = 834/914 (91%), Gaps = 19/914 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGEN--A 58
MNPDKFTHKTNEA+A AHE+A+ AGHAQ TPLHLA AL +D SGI QAI +A G N A
Sbjct: 1 MNPDKFTHKTNEALAAAHEMASEAGHAQLTPLHLAAALAADRSGILRQAIAHASGGNDAA 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A+S ERV + A+K+LPSQ+P PD +PAST+L+K +RRAQ+AQK+ GD+HLAVDQL++GLL
Sbjct: 61 AESFERVASAALKRLPSQSPPPDTVPASTSLVKAVRRAQSAQKSRGDSHLAVDQLLMGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
ED QI D KEAG++ ARVK+EVEKLRG + R+VESASGDT FQALKTYGRDLVE AGKL
Sbjct: 121 EDPQISDALKEAGISAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQR+VRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
+ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 VALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSVPDTVSILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTVSILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALV+AAQLS+RYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVIAAQLSSRYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+ELHALEKEKDKASKARLV+VRKELDDLRDKLQPL M+Y+KEKERIDEIR LKQ
Sbjct: 421 KRIQLEVELHALEKEKDKASKARLVDVRKELDDLRDKLQPLQMKYRKEKERIDEIRSLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADLRYGA+QEV+AAI +LEG ++ ENLMLTETVGPDQIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLRYGALQEVDAAIAKLEG-ETGENLMLTETVGPDQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQNEK RLIGLA EAVNAV E+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGAEHLL+GM+G +M+VARD V+QEVR+HFRPELLNRLDEIV+FDPLSHEQLRKVAR
Sbjct: 720 SNLGAEHLLAGMVGN-SMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVAR 778
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA+RLAERGVALAVTDAALD++L+ SYDP+YGARPIRRW+EK++VTELS+ML+RE
Sbjct: 779 LQMKDVAVRLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRIVTELSKMLIRE 838
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP-RTDPSQAVKKM 886
EIDENSTVYIDA+P D L Y V K+GG V+A TG KSD+LIQ+P+G D + AVKKM
Sbjct: 839 EIDENSTVYIDAAPSKDELTYGVDKHGGLVNARTGHKSDILIQVPSGAVGGDAAHAVKKM 898
Query: 887 KIEEIVDDDEMVDD 900
K I+ D VDD
Sbjct: 899 K---IMQDSGEVDD 909
>gi|40060485|gb|AAR37417.1| heat shock protein HSP101 [Zea mays]
Length = 912
Score = 1530 bits (3961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 758/902 (84%), Positives = 825/902 (91%), Gaps = 15/902 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNPD FTHKTNEAI AHE+A AGHAQ TPLHLA L +D GI QAI A G + A
Sbjct: 1 MNPDNFTHKTNEAIVGAHEIAVEAGHAQLTPLHLAAVLAADKGGILRQAITGASGGDGAA 60
Query: 61 SA--ERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
ERV N ++KKLPSQ+P PD +PAST LIKVIRRAQ+AQK GD+HLAVDQL+LGLL
Sbjct: 61 GDSFERVLNNSLKKLPSQSPPPDSVPASTALIKVIRRAQSAQKKRGDSHLAVDQLLLGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
EDSQI D KEAGV+ ARV++E+EKLRG EGR+VESASGDT FQALKTYGRDLVEQAGKL
Sbjct: 121 EDSQISDCLKEAGVSAARVRAELEKLRGGEGRRVESASGDTNFQALKTYGRDLVEQAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIG PGVGKTAVVEGLAQRIVRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGGPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSVPDTVSILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTVSILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALVVAAQLSARYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+ELHALEKEKDKASKARL+EVRKELDDLR KLQPL M+Y+KEKERIDEIR+LKQ
Sbjct: 421 KRIQLEVELHALEKEKDKASKARLIEVRKELDDLRVKLQPLTMKYRKEKERIDEIRKLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADL+YGA+QE++AAI +LE +++ ENLMLTETVGP+QIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLKYGALQEIDAAISKLE-SETGENLMLTETVGPEQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQN+KERL+GLA EAV+AVAE+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQTEAVSAVAEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTV+FRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVNFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SN GAEHLL+GM+GK +M+VARD V+QEVR+HFRPELLNRLDEIV+FDPLSHEQLRKVAR
Sbjct: 720 SNPGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVAR 779
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA+RLAERG+ALAVTDAALDI+L+ SYDP+YGARPIRRW+EK+VVT+LS+ML++E
Sbjct: 780 LQMKDVAVRLAERGIALAVTDAALDIILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQE 839
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP-RTDPSQAVKKM 886
EIDEN TVYIDA+P D LVYRV ++GG V+A TG KSD+LIQ PN R+D +QAVKKM
Sbjct: 840 EIDENCTVYIDAAPGKDELVYRVDRSGGLVNAETGMKSDILIQAPNSSTRSDAAQAVKKM 899
Query: 887 KI 888
+I
Sbjct: 900 RI 901
>gi|357136407|ref|XP_003569796.1| PREDICTED: chaperone protein ClpB1-like isoform 1 [Brachypodium
distachyon]
Length = 913
Score = 1530 bits (3961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 760/902 (84%), Positives = 826/902 (91%), Gaps = 16/902 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGEN--A 58
MNPDKFTHKTNEA+A AHE+A AGHAQ TPLHLA AL +D SGI QAI +A G N A
Sbjct: 1 MNPDKFTHKTNEALAAAHEMALDAGHAQLTPLHLAAALAADRSGILRQAIAHASGGNDSA 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A+S ERV A+K+LPSQ P PD +P ST+L+K IRRAQ+AQK+ GD+HLAVDQL++GLL
Sbjct: 61 AESFERVAAAALKRLPSQAPPPDAVPPSTSLVKAIRRAQSAQKSRGDSHLAVDQLLIGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
EDSQI D KEAGV+ ARVK+EVEKLRG + R+VESASGDT FQALKTYGRDLVE AGKL
Sbjct: 121 EDSQISDALKEAGVSAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
+ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 VALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSV DTVSILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVTDTVSILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALVVAAQLS+RYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVVAAQLSSRYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+ELHALEKEKDKASKARL+EVRKELDDLRDKL PL M+Y+KEKERIDEIR LKQ
Sbjct: 421 KRIQLEVELHALEKEKDKASKARLIEVRKELDDLRDKLHPLQMKYRKEKERIDEIRNLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADLRYGA+QE++ AI +LEG ++ ENLMLTETVGPDQIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLRYGALQEIDVAIAKLEG-ETGENLMLTETVGPDQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGL-----------AEAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQNEKERL+GL EAV+AVAE+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNEKERLVGLDDRLHQRVVGQHEAVSAVAEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGAEHLL+GMMG +M+VARD V+QEVR+HFRPELLNRLDEIV+FDPLSHEQLRKVAR
Sbjct: 720 SNLGAEHLLAGMMGN-SMKVARDMVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVAR 778
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
QMKDVA+RLAERG+ALAVTDAALDI+L+ SYDP+YGARPIRRW+EK++VTELS+ML+RE
Sbjct: 779 FQMKDVAVRLAERGIALAVTDAALDIILSLSYDPVYGARPIRRWIEKRIVTELSKMLIRE 838
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP-RTDPSQAVKKM 886
EIDENSTVYIDA+P + L YRV KNGGFV+ TG+KSD+LIQ+P+G +D + AVKKM
Sbjct: 839 EIDENSTVYIDAAPGKEELTYRVDKNGGFVNVQTGQKSDILIQVPSGAIGSDAAHAVKKM 898
Query: 887 KI 888
KI
Sbjct: 899 KI 900
>gi|110623257|emb|CAI94867.2| heat shock protein 101 [Triticum durum]
Length = 913
Score = 1528 bits (3957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 763/914 (83%), Positives = 832/914 (91%), Gaps = 19/914 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGEN--A 58
MNPDKFTHKTNEA+A AHE+A+ AGHAQ TPLHLA AL +D SGI QAI +A G N A
Sbjct: 1 MNPDKFTHKTNEALAAAHEMASEAGHAQLTPLHLAAALAADRSGILRQAIAHASGGNDAA 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A+S ERV A+K+LPSQ+P PD +PAST+L+K +RRAQ+AQK+ GD+HLAVDQL++GLL
Sbjct: 61 AESFERVATAALKRLPSQSPPPDTVPASTSLVKAVRRAQSAQKSRGDSHLAVDQLLMGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
ED QI D KEAG++ ARVK+EVEKLRG + R+VESASGDT FQALKTYGRDLVE AGKL
Sbjct: 121 EDPQISDALKEAGISAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQR+VRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
+ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 VALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSVPDTVSILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTVSILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALV+AAQLS+RYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVIAAQLSSRYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+ELHALEKEKDKASKARLV+VRKELDDLRDKLQPL M+Y+KEKERIDEIRRLKQ
Sbjct: 421 KRIQLEVELHALEKEKDKASKARLVDVRKELDDLRDKLQPLQMKYRKEKERIDEIRRLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADLRYGA+QEV+AAI +LEG ++ ENLMLTETVGPDQIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLRYGALQEVDAAIAKLEG-ETGENLMLTETVGPDQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQNEK RLIGLA EAVNAV E+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFD ENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDHENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGAEHLL+GM+G +M+VARD V+QEVR+HFRPELLNRLDEIV+FDPLSHEQLRKVAR
Sbjct: 720 SNLGAEHLLAGMVGN-SMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVAR 778
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA+RLAERGVALAVTDAALD++L+ SYDP+YGARPIRRW+EK++V ELS+ML+RE
Sbjct: 779 LQMKDVAVRLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRIVAELSKMLIRE 838
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP-RTDPSQAVKKM 886
EIDENSTVYIDA+P D L Y V K+GG V+A TG KSD+LIQ+P+G D + AVKKM
Sbjct: 839 EIDENSTVYIDAAPSKDELTYGVDKHGGLVNARTGHKSDILIQVPSGAVEGDAAHAVKKM 898
Query: 887 KIEEIVDDDEMVDD 900
K I+ D VDD
Sbjct: 899 K---IMQDGGEVDD 909
>gi|357136409|ref|XP_003569797.1| PREDICTED: chaperone protein ClpB1-like isoform 2 [Brachypodium
distachyon]
Length = 920
Score = 1523 bits (3943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 760/909 (83%), Positives = 826/909 (90%), Gaps = 23/909 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGEN--A 58
MNPDKFTHKTNEA+A AHE+A AGHAQ TPLHLA AL +D SGI QAI +A G N A
Sbjct: 1 MNPDKFTHKTNEALAAAHEMALDAGHAQLTPLHLAAALAADRSGILRQAIAHASGGNDSA 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A+S ERV A+K+LPSQ P PD +P ST+L+K IRRAQ+AQK+ GD+HLAVDQL++GLL
Sbjct: 61 AESFERVAAAALKRLPSQAPPPDAVPPSTSLVKAIRRAQSAQKSRGDSHLAVDQLLIGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
EDSQI D KEAGV+ ARVK+EVEKLRG + R+VESASGDT FQALKTYGRDLVE AGKL
Sbjct: 121 EDSQISDALKEAGVSAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
+ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 VALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSV DTVSILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVTDTVSILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALVVAAQLS+RYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVVAAQLSSRYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+ELHALEKEKDKASKARL+EVRKELDDLRDKL PL M+Y+KEKERIDEIR LKQ
Sbjct: 421 KRIQLEVELHALEKEKDKASKARLIEVRKELDDLRDKLHPLQMKYRKEKERIDEIRNLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADLRYGA+QE++ AI +LEG ++ ENLMLTETVGPDQIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLRYGALQEIDVAIAKLEG-ETGENLMLTETVGPDQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGL-----------AEAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQNEKERL+GL EAV+AVAE+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNEKERLVGLDDRLHQRVVGQHEAVSAVAEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQE-------VRKHFRPELLNRLDEIVVFDPLSHE 760
SNLGAEHLL+GMMG +M+VARD V+QE VR+HFRPELLNRLDEIV+FDPLSHE
Sbjct: 720 SNLGAEHLLAGMMGN-SMKVARDMVMQEVCASITVVRRHFRPELLNRLDEIVIFDPLSHE 778
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
QLRKVAR QMKDVA+RLAERG+ALAVTDAALDI+L+ SYDP+YGARPIRRW+EK++VTEL
Sbjct: 779 QLRKVARFQMKDVAVRLAERGIALAVTDAALDIILSLSYDPVYGARPIRRWIEKRIVTEL 838
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP-RTDP 879
S+ML+REEIDENSTVYIDA+P + L YRV KNGGFV+ TG+KSD+LIQ+P+G +D
Sbjct: 839 SKMLIREEIDENSTVYIDAAPGKEELTYRVDKNGGFVNVQTGQKSDILIQVPSGAIGSDA 898
Query: 880 SQAVKKMKI 888
+ AVKKMKI
Sbjct: 899 AHAVKKMKI 907
>gi|326511825|dbj|BAJ92057.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 914
Score = 1522 bits (3941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 761/915 (83%), Positives = 832/915 (90%), Gaps = 20/915 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGEN--A 58
MNPDKFTHKTNEA+A AHE+A+ AGHAQ TPLHLA AL +D SGI QAI +A G N A
Sbjct: 1 MNPDKFTHKTNEALAAAHEMASEAGHAQLTPLHLAAALAADRSGILRQAIAHASGGNDAA 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+S ERV + A+K+LPSQ+P PD +PAST+L+K +RRAQ+AQK+ GD+HLAVDQLI+GLL
Sbjct: 61 VESFERVASTALKRLPSQSPPPDTVPASTSLVKAVRRAQSAQKSRGDSHLAVDQLIVGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
ED QI D KEAG + ARVK+EVEKLRG + R+VESASGDT FQALKTYGRDLVE AGKL
Sbjct: 121 EDPQISDALKEAGASAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQR+VRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
+ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 VALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV VAEPSVPDTVSILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVLVAEPSVPDTVSILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALVVAAQLSARYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+ELHALE+EKDKASKARLV+VRKEL+DLRDKLQPL M+Y+KEKERIDEIR LKQ
Sbjct: 421 KRIQLEVELHALEREKDKASKARLVDVRKELEDLRDKLQPLQMKYRKEKERIDEIRSLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADLRYGA+QEV+AAI +LEG ++ ENLMLTETVGPDQIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLRYGALQEVDAAIARLEG-ETGENLMLTETVGPDQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQNEK RLIGLA EAVNAV E+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGA+HLL+GM+G +M+VARD V+QEVR+HFRPELLNRLDE+V+FDPLSHEQLRKVAR
Sbjct: 720 SNLGAKHLLAGMVGN-SMKVARDLVMQEVRRHFRPELLNRLDEMVIFDPLSHEQLRKVAR 778
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA RLAERGVALAVTDAALD++L+ SYDP+YGARPIRRW+EK++VTELS+ML+RE
Sbjct: 779 LQMKDVAARLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRIVTELSKMLIRE 838
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP--RTDPSQAVKK 885
EIDENSTVY+DA+P D L Y V K+GG V+A+TGRKSD+LIQ+P+G D + AVKK
Sbjct: 839 EIDENSTVYVDAAPGKDELTYGVDKHGGLVNASTGRKSDILIQVPSGAVGGGDAAHAVKK 898
Query: 886 MKIEEIVDDDEMVDD 900
MK ++ D VDD
Sbjct: 899 MK---VMQDGGDVDD 910
>gi|115464933|ref|NP_001056066.1| Os05g0519700 [Oryza sativa Japonica Group]
gi|62510680|sp|Q6F2Y7.1|CLPB1_ORYSJ RecName: Full=Chaperone protein ClpB1; AltName: Full=ATP-dependent
Clp protease ATP-binding subunit ClpB homolog 1;
AltName: Full=Casein lytic proteinase B1; AltName:
Full=Heat shock protein 101
gi|18033450|gb|AAL57165.1|AF332981_1 heat shock protein [Oryza sativa Japonica Group]
gi|50080323|gb|AAT69657.1| putative heat shock protein HSP101 [Oryza sativa Japonica Group]
gi|52353699|gb|AAU44265.1| heat shock protein HSP101 [Oryza sativa Japonica Group]
gi|113579617|dbj|BAF17980.1| Os05g0519700 [Oryza sativa Japonica Group]
gi|215740589|dbj|BAG97245.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632258|gb|EEE64390.1| hypothetical protein OsJ_19232 [Oryza sativa Japonica Group]
Length = 912
Score = 1513 bits (3918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 760/912 (83%), Positives = 831/912 (91%), Gaps = 18/912 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MNPD FTHKTNEA+ AHE+A+ AGHAQ TPLHL AL +D GI QAI+ A G +A
Sbjct: 1 MNPDNFTHKTNEALVAAHEIASEAGHAQLTPLHLVAALAADKGGILRQAISQASGGDAGA 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
S ERV + A+KKLPSQ+P PD +PAST LIKVIRRAQ+AQK GD+HLAVDQL+LGLL
Sbjct: 61 PDSFERVVSGALKKLPSQSPPPDSVPASTALIKVIRRAQSAQKKRGDSHLAVDQLLLGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
EDS I D KEAGV+ ARV++E+EKLRG EGRKVESASGDT FQALKTYGRDLVEQAGKL
Sbjct: 121 EDSLISDCLKEAGVSAARVRAELEKLRGGEGRKVESASGDTNFQALKTYGRDLVEQAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSVPDT+SILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALVVAAQLSARYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+E HALEKEKDKASKARLVEV+KELDDLRDKLQPL M+Y+KEKERIDEIR+LKQ
Sbjct: 421 KRIQLEVEHHALEKEKDKASKARLVEVKKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADL+YGA+QE++ AI +LE +++ ENLMLTETVGP+QIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLKYGALQEIDVAIAKLE-SETGENLMLTETVGPEQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLAEAVN-----------AVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQN+KERL+GLA+ ++ AVAE+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQAEAVSAVAEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGAEHLL+GM+GK +M+VARD V+QEVR+HFRPELLNRLDEIV+FDPLSHEQLRKVAR
Sbjct: 720 SNLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVAR 779
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA+RLAERGVALAVTDAALD++L+ SYDP+YGARPIRRW+EK+VVT+LS+ML++E
Sbjct: 780 LQMKDVAVRLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQE 839
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRT--DPSQAVKK 885
EIDEN TVYIDA+P D L YRV GG V+A TG+KSD+LIQ+PNG T D +QAVKK
Sbjct: 840 EIDENCTVYIDAAPHKDELAYRVDNRGGLVNAETGQKSDILIQVPNGAATGSDAAQAVKK 899
Query: 886 MKIEEIVDDDEM 897
M+I E D+D M
Sbjct: 900 MRIME--DEDGM 909
>gi|218197115|gb|EEC79542.1| hypothetical protein OsI_20656 [Oryza sativa Indica Group]
Length = 913
Score = 1512 bits (3915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 756/903 (83%), Positives = 826/903 (91%), Gaps = 16/903 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MNPD FTHKTNEA+ AHE+A+ AGHAQ TPLHL AL +D GI QAI+ A G +A
Sbjct: 1 MNPDNFTHKTNEALVAAHEMASEAGHAQLTPLHLTAALAADKGGILRQAISQASGGDAGA 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
S ERV + A+KKLPSQ+P PD +PAST LIKVIRRAQ+AQK GD+HLAVDQL+LGLL
Sbjct: 61 PDSFERVVSGALKKLPSQSPPPDSVPASTALIKVIRRAQSAQKKRGDSHLAVDQLLLGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
EDS I D KEAGV+ ARV++E+EKLRG EGRKVESASGDT FQALKTYGRDLVEQAGKL
Sbjct: 121 EDSLISDCLKEAGVSAARVRAELEKLRGGEGRKVESASGDTNFQALKTYGRDLVEQAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSVPDT+SILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALVVAAQLSARYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+E HALEKEKDKASKARLVEV+KELDDLRDKLQPL M+Y+KEKERIDEIR+LKQ
Sbjct: 421 KRIQLEVEHHALEKEKDKASKARLVEVKKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADL+YGA+QE++ AI +LE +++ ENLMLTETVGP+QIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLKYGALQEIDVAIAKLE-SETGENLMLTETVGPEQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLAEAVN-----------AVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQN+KERL+GLA+ ++ AVAE+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQAEAVSAVAEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGAEHLL+GM+GK +M+VARD V+QEVR+HFRPELLNRLDEIV+FDPLSHEQLRKVAR
Sbjct: 720 SNLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVAR 779
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA+RLAERGVALAVTDAALD++L+ SYDP+YGARPIRRW+EK+VVT+LS+ML++E
Sbjct: 780 LQMKDVAVRLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQE 839
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRT--DPSQAVKK 885
EIDEN TVYIDA+P D L YRV GG V+A TG+KSD+LIQ+PNG T D +QAVKK
Sbjct: 840 EIDENCTVYIDAAPHKDELAYRVDNRGGLVNAETGQKSDILIQVPNGAATGSDAAQAVKK 899
Query: 886 MKI 888
M+I
Sbjct: 900 MRI 902
>gi|110623253|emb|CAI94865.2| heat shock protein 101 [Triticum durum]
Length = 917
Score = 1511 bits (3911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 754/918 (82%), Positives = 835/918 (90%), Gaps = 20/918 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MNPD FTHKTNEA+ AHE A+ AGHAQ TPLHLA AL +D SGI QA+ A G NA+
Sbjct: 1 MNPDNFTHKTNEALVAAHEAASEAGHAQITPLHLAAALAADRSGILRQAVAGASGGNASA 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
S ERV + A+KKLPSQ+P PD +PAST LIK IRRAQ+AQK GD+HLAVDQL++GLL
Sbjct: 61 GDSFERVLSAALKKLPSQSPPPDSVPASTALIKAIRRAQSAQKKRGDSHLAVDQLLMGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKE-GRKVESASGDTTFQALKTYGRDLVEQAGK 177
ED+QI D KEAGV+ +RV++E+EKLRG + RKVESASGDT FQALKTYGRDLVE AGK
Sbjct: 121 EDAQIADCLKEAGVSASRVRAELEKLRGGDNARKVESASGDTNFQALKTYGRDLVEVAGK 180
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQR+VRGDVPSNL DVR
Sbjct: 181 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLLDVR 240
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ALDMGALVAGAKYRGEFEERLKAVLKEVEEA+GKVILFIDEIHLVLGAGRTEGSMDAA
Sbjct: 241 LVALDMGALVAGAKYRGEFEERLKAVLKEVEEADGKVILFIDEIHLVLGAGRTEGSMDAA 300
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV DT+SILRGLKEK
Sbjct: 301 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTISILRGLKEK 360
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YEGHHGVRIQDRA+VVAAQLSARYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE
Sbjct: 361 YEGHHGVRIQDRAIVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 420
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RKR+QLE+ELHALEKEKDKASKARLVEVRKELDDLRDKLQPL M+Y+KEKERIDEIR+LK
Sbjct: 421 RKRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLTMKYRKEKERIDEIRKLK 480
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
Q+REEL F LQEAERR DLAR ADL+YGA+QE++AAI +LEG ++ ENLMLTETVGP+QI
Sbjct: 481 QRREELQFTLQEAERRMDLARVADLKYGALQEIDAAIAKLEG-ETGENLMLTETVGPEQI 539
Query: 538 AEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQ 586
AEVVSRWTGIPVTRLGQN+KERL+G+A EAVNAVAE+VLRSRAGLGRPQQ
Sbjct: 540 AEVVSRWTGIPVTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRAGLGRPQQ 599
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGH
Sbjct: 600 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGH 659
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM
Sbjct: 660 EEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 719
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLGAEHLL+GM+GK +M+VARD V+QEVR+HFRPELLNRLDEIVVFDPLSHEQLRKVA
Sbjct: 720 TSNLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVVFDPLSHEQLRKVA 779
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
RLQM+DVA+RLAERGVALAVTDAALD++L+ +YDP+YGARPIRRW+EK+VVT+LS+ML++
Sbjct: 780 RLQMRDVAVRLAERGVALAVTDAALDVILSLAYDPVYGARPIRRWIEKRVVTQLSKMLIQ 839
Query: 827 EEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPN----GPRTDPSQA 882
EEIDEN TVYIDA+ K D L YRV ++GG V+A TG++SD+LIQ+PN G + ++A
Sbjct: 840 EEIDENCTVYIDAANK-DELAYRVDRSGGLVNAETGQRSDILIQVPNGALGGGGGEAAKA 898
Query: 883 VKKMKIEEIVDDDEMVDD 900
VKKM++ E D+D M +D
Sbjct: 899 VKKMRVMEDGDEDSMDED 916
>gi|4558484|gb|AAD22629.1|AF097363_1 heat shock protein 101 [Triticum aestivum]
Length = 918
Score = 1507 bits (3902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 745/887 (83%), Positives = 817/887 (92%), Gaps = 16/887 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MNPD FTHKTNEA+ AHE A+ AGHAQ TPLHLA AL +D SGI QA+ A G NA+
Sbjct: 1 MNPDNFTHKTNEALVAAHEAASEAGHAQITPLHLAAALAADKSGILRQAVAGASGGNASA 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
S ERV + A+KKLPSQ+P PD +PAST LIK IRRAQ+AQK GD+HLAVDQL++GLL
Sbjct: 61 GDSFERVLSGALKKLPSQSPPPDSVPASTALIKAIRRAQSAQKKRGDSHLAVDQLLMGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEG-RKVESASGDTTFQALKTYGRDLVEQAGK 177
ED+QI D KEAGV+ +RV++E+EKLRG + RKVESASGDT FQALKTYGRDLVE AGK
Sbjct: 121 EDAQIADCLKEAGVSASRVRAELEKLRGGDNSRKVESASGDTNFQALKTYGRDLVEVAGK 180
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQR+VRGDVPSNL DVR
Sbjct: 181 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLLDVR 240
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA
Sbjct: 241 LVALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 300
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV DT+SILRGLKEK
Sbjct: 301 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTISILRGLKEK 360
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YEGHHGVRIQDRA+VVAAQLSARYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE
Sbjct: 361 YEGHHGVRIQDRAIVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 420
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RKR+QLE+ELHALEKEKDKASKARLVEVRKELDDLRDKLQPL M+Y+KEKERIDEIR+LK
Sbjct: 421 RKRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLTMKYRKEKERIDEIRKLK 480
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
Q+REEL F LQEAERR DLAR ADL+YGA+QE++AAI +LEG ++ ENLMLTETVGP+QI
Sbjct: 481 QRREELQFTLQEAERRMDLARVADLKYGALQEIDAAIAKLEG-ETGENLMLTETVGPEQI 539
Query: 538 AEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQ 586
AEVVSRWTGIPVTRLGQN+KERL+G+A EAVNAVAE+VLRSRAGLGRPQQ
Sbjct: 540 AEVVSRWTGIPVTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRAGLGRPQQ 599
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGH
Sbjct: 600 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGH 659
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM
Sbjct: 660 EEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 719
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLGAEHLL+GM+GK +M+VARD V+QEVR+HFRPELLNRLDEIVVFDPLSHEQLRKVA
Sbjct: 720 TSNLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVVFDPLSHEQLRKVA 779
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
RLQMKDVA+RLAERGVALAVTDAALD++L+ +YDP+YGARPIRRW+EK+VVT+LS+ML++
Sbjct: 780 RLQMKDVAVRLAERGVALAVTDAALDVILSLAYDPVYGARPIRRWIEKRVVTQLSKMLIQ 839
Query: 827 EEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPN 873
EEIDEN TVYIDA+ K D L YRV ++GG V+A TG++SD+LIQ+PN
Sbjct: 840 EEIDENCTVYIDAANK-DELAYRVDRSGGLVNAETGQRSDILIQVPN 885
>gi|242054405|ref|XP_002456348.1| hypothetical protein SORBIDRAFT_03g034390 [Sorghum bicolor]
gi|241928323|gb|EES01468.1| hypothetical protein SORBIDRAFT_03g034390 [Sorghum bicolor]
Length = 915
Score = 1506 bits (3899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 739/903 (81%), Positives = 820/903 (90%), Gaps = 16/903 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGEN--- 57
MNP+KFTHKTNEA+A+AH +A+ AGHAQ TPLHLA AL++D G+ QAI +A G N
Sbjct: 1 MNPNKFTHKTNEALALAHNIASEAGHAQITPLHLAAALIADRPGVLRQAIAHASGGNDVA 60
Query: 58 AAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
AA S ERV +K+LPSQ+P PD +PAST L+KVIRRAQ+AQK GD+HLAVDQL++GL
Sbjct: 61 AADSFERVLASTLKRLPSQSPPPDTVPASTALVKVIRRAQSAQKVRGDSHLAVDQLLVGL 120
Query: 118 LEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGK 177
LED Q+ D KEAGV ARVK+EV+KLRG + R+VESASGDT+FQA+KTYGRDLVE AGK
Sbjct: 121 LEDPQVWDALKEAGVVAARVKAEVDKLRGGDNRRVESASGDTSFQAVKTYGRDLVEVAGK 180
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL DVR
Sbjct: 181 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVR 240
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ALDMGALVAGAKYRGEFEERLKAVLKEVEE++GKVILFIDEIHLVLGAGRT+GSMDAA
Sbjct: 241 LVALDMGALVAGAKYRGEFEERLKAVLKEVEESDGKVILFIDEIHLVLGAGRTDGSMDAA 300
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV DTVSILRGLKEK
Sbjct: 301 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVSDTVSILRGLKEK 360
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YEGHHGVRIQDRALV+AAQLS+RYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE
Sbjct: 361 YEGHHGVRIQDRALVIAAQLSSRYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 420
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RKR+QLE+ELHALEKEKDKASKARLVEVRKELD+LRDKLQPL MRY+KEKERIDEIR+LK
Sbjct: 421 RKRIQLEVELHALEKEKDKASKARLVEVRKELDNLRDKLQPLQMRYRKEKERIDEIRKLK 480
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+REELLF+LQEAERR DLAR AD+RYGA+QE++AAI +LEG ++ ENLMLTETVGP+QI
Sbjct: 481 HRREELLFSLQEAERRMDLARVADIRYGALQEIDAAIAKLEG-ETGENLMLTETVGPEQI 539
Query: 538 AEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQ 586
AEVVSRWTGIPVTRLGQN+KERL+GLA EAVNA+AE+VLRSRAGLGR QQ
Sbjct: 540 AEVVSRWTGIPVTRLGQNDKERLVGLADRLHRRVIGQHEAVNAIAEAVLRSRAGLGRTQQ 599
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
PTGSFLFLGPTGVGKTELAKALAEQLFDDE LLVR+DMSEYME+HSVSRLIGAPPGYVGH
Sbjct: 600 PTGSFLFLGPTGVGKTELAKALAEQLFDDEKLLVRLDMSEYMEKHSVSRLIGAPPGYVGH 659
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM
Sbjct: 660 EEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 719
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSN+GA+HLL+GM+G +M+ ARD V+ EVRKHFRPELLNRLDEIV+FDPLSHEQLR VA
Sbjct: 720 TSNIGAKHLLAGMVGNNSMKAARDLVMLEVRKHFRPELLNRLDEIVIFDPLSHEQLRMVA 779
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
RLQ+K+VA RLAERGVALAVTDAALD++L+ SYDP+YGARPIRRW+EKKVVTELS+ML++
Sbjct: 780 RLQVKEVAYRLAERGVALAVTDAALDLILSLSYDPVYGARPIRRWIEKKVVTELSKMLIK 839
Query: 827 EEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP-RTDPSQAVKK 885
EEIDENSTV IDASP D L+Y+V NGG V+A TG KSD+LIQ+PNG + VKK
Sbjct: 840 EEIDENSTVSIDASPSKDELIYKVDMNGGLVNAQTGHKSDILIQVPNGGINGGAAHTVKK 899
Query: 886 MKI 888
M++
Sbjct: 900 MRL 902
>gi|110623251|emb|CAI94864.2| heat shock protein 101 [Triticum durum]
Length = 913
Score = 1504 bits (3895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 750/914 (82%), Positives = 832/914 (91%), Gaps = 21/914 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MNPD FTHKTNEA+ AHE A+ AGHAQ TPLHLA AL +D SGI QA+ A G NA+
Sbjct: 1 MNPDNFTHKTNEALVAAHEAASEAGHAQITPLHLAAALAADKSGILRQAVAGASGGNASA 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
S ERV A+KKLPSQ+P PD +PAST LIK IRRAQ+AQK GD+HLAVDQL++GLL
Sbjct: 61 GDSFERVLAGALKKLPSQSPPPDSVPASTALIKAIRRAQSAQKKRGDSHLAVDQLLMGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEG-RKVESASGDTTFQALKTYGRDLVEQAGK 177
ED+QI D KEAGV+ +RV++E++KLRG + RKVESASGDTTFQALKTYGRDLVE AGK
Sbjct: 121 EDAQIADCLKEAGVSASRVRAELDKLRGGDNSRKVESASGDTTFQALKTYGRDLVEVAGK 180
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQR+VRGDVPSNL DVR
Sbjct: 181 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLLDVR 240
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ALDMGALVAGAKYRGEFEERLKAVLKEVEEA+GKVILFIDEIHLVLGAGRTEGSMDAA
Sbjct: 241 LVALDMGALVAGAKYRGEFEERLKAVLKEVEEADGKVILFIDEIHLVLGAGRTEGSMDAA 300
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV DT+SILRGLKEK
Sbjct: 301 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTISILRGLKEK 360
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YEGHHGVRIQDRA+VVAAQLSARYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE
Sbjct: 361 YEGHHGVRIQDRAIVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 420
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RKR+QLE+ELHALEKEKDKASKARLVEVRKELDDLRDKLQPL M+Y+KEKERIDEIR+LK
Sbjct: 421 RKRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLTMKYRKEKERIDEIRKLK 480
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
Q+REEL F LQEAERR DLAR ADL+YGA+QE++AAI +LEG ++ ENLMLTETVGP+QI
Sbjct: 481 QRREELQFTLQEAERRMDLARVADLKYGALQEIDAAIAKLEG-ETGENLMLTETVGPEQI 539
Query: 538 AEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQ 586
AEVVSRWTGIPVTRLGQN+KERL+G+A EAVNAVAE+VLRSRAGLGRPQQ
Sbjct: 540 AEVVSRWTGIPVTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRAGLGRPQQ 599
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGH
Sbjct: 600 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGH 659
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM
Sbjct: 660 EEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 719
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLGAEHLL+GM+GK +M+VARD V+QEVR+HFRPELLNRLDE+V+FDPLSHEQLRKVA
Sbjct: 720 TSNLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEMVIFDPLSHEQLRKVA 779
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
RLQMKDVA+RLAERGVALAVTDAALD++L+ +YDP+YGARPIRRW+EK+VVT+LS+ML++
Sbjct: 780 RLQMKDVAVRLAERGVALAVTDAALDVILSLAYDPVYGARPIRRWIEKRVVTQLSKMLIQ 839
Query: 827 EEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPN-----GPRTDPSQ 881
EEI+EN TVYIDA+ K D L YRV ++GG V+A TG++SD+LIQ+PN G + ++
Sbjct: 840 EEINENCTVYIDAADK-DELAYRVDRSGGLVNAETGQRSDILIQVPNGALGGGGGGEAAK 898
Query: 882 AVKKMKIEEIVDDD 895
AVKKM++ E D+D
Sbjct: 899 AVKKMRVMEDGDED 912
>gi|326531902|dbj|BAK01327.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 916
Score = 1501 bits (3886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 747/886 (84%), Positives = 815/886 (91%), Gaps = 15/886 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNPD FTHKTNEA+ AHE A+ AGHAQ TPLHLA AL +D SGI QA+ A G NAA
Sbjct: 1 MNPDNFTHKTNEALVAAHEAASEAGHAQITPLHLAAALAADKSGILRQAVAGASGGNAAA 60
Query: 61 --SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
S ERV A+KKLPSQ+P PD +PAST LIK IRRAQ+AQK GD+HLAVDQL++GLL
Sbjct: 61 GDSFERVLTAALKKLPSQSPPPDSVPASTALIKAIRRAQSAQKKRGDSHLAVDQLLMGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
EDSQI D KEAGV+ +RV++E+EKLRG + RKVESASGDT FQALKTYGRDLVE AGKL
Sbjct: 121 EDSQIADCLKEAGVSASRVRAELEKLRGGDSRKVESASGDTNFQALKTYGRDLVEVAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQR+VRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
+ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 VALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV DT+SILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTISILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRA+VVAAQLSARYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRAIVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+ELHALEKEKDKASKARLVEVRKELDDLRDKLQPL M+Y+KEKERIDEIR+LKQ
Sbjct: 421 KRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADL+YGA+QE++AAI +LEG ++ ENLMLTETVGP+QIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLKYGALQEIDAAIAKLEG-ETGENLMLTETVGPEQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQN+KERL+G+A EAVNAVAE+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGAEHLL+GM+GK +M+VARD V+QEVR+HFRPELLNRLDEIVVFDPLSHEQLRKVAR
Sbjct: 720 SNLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVVFDPLSHEQLRKVAR 779
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA+RLAERGVALAVTDAALD++L+ +YDP+YGARPIRRW+EK+VVT+LS+ML++E
Sbjct: 780 LQMKDVAVRLAERGVALAVTDAALDVILSLAYDPVYGARPIRRWIEKRVVTQLSKMLIQE 839
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPN 873
EIDEN TVYIDA+ K D L YRV + GG V+A TG++SD+LIQ+PN
Sbjct: 840 EIDENCTVYIDAANK-DELAYRVDRTGGLVNAETGQRSDILIQVPN 884
>gi|11561808|gb|AAC83689.2| 101 kDa heat shock protein [Triticum aestivum]
Length = 918
Score = 1499 bits (3881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 740/887 (83%), Positives = 816/887 (91%), Gaps = 16/887 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MNPD FTHKTNEA+ AHE A+ AGHAQ TPLHLA AL +D SGI QA+ A G NA+
Sbjct: 1 MNPDNFTHKTNEALVAAHEAASEAGHAQITPLHLAAALAADKSGILRQAVAGASGGNASA 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
S ERV A++KLPSQ+P PD +PAST LIK IRRAQ+AQK GD+HLAVDQL++GLL
Sbjct: 61 GDSFERVLAGALRKLPSQSPPPDSVPASTALIKAIRRAQSAQKKRGDSHLAVDQLLMGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEG-RKVESASGDTTFQALKTYGRDLVEQAGK 177
ED+QI D KEAGV+ +RV++E++KLRG + RKVESA GDTTFQALKTYGRDLVE AGK
Sbjct: 121 EDAQIADCLKEAGVSASRVRAELDKLRGGDNSRKVESAFGDTTFQALKTYGRDLVEVAGK 180
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQR+VRGDVPSNL DVR
Sbjct: 181 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLLDVR 240
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ALDMGALVAGAKYRGEFEERLKAVLKEVEEA+GKVILFIDEIHLVLGAGRTEGSMDAA
Sbjct: 241 LVALDMGALVAGAKYRGEFEERLKAVLKEVEEADGKVILFIDEIHLVLGAGRTEGSMDAA 300
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV DT+SILRGLKEK
Sbjct: 301 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTISILRGLKEK 360
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YEGHHGVRIQDRA+VVAAQLSARYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE
Sbjct: 361 YEGHHGVRIQDRAIVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 420
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RKR+QLE+ELHALEKEKDKASKARLVEVRKELDDLRDKLQPL M+Y+KEKERIDEIR+LK
Sbjct: 421 RKRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLTMKYRKEKERIDEIRKLK 480
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
Q+REEL F LQEAERR DLAR ADL+YGA+QE++AAI +LEG ++ ENLMLTETVGP+QI
Sbjct: 481 QRREELQFTLQEAERRMDLARVADLKYGALQEIDAAIAKLEG-ETGENLMLTETVGPEQI 539
Query: 538 AEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQ 586
AEVVSRWTGIPVTRLGQN+KERL+G+A EAVNAVAE+VLRSRAGLGRPQQ
Sbjct: 540 AEVVSRWTGIPVTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRAGLGRPQQ 599
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGH
Sbjct: 600 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGH 659
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM
Sbjct: 660 EEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 719
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLGAEHLL+GM+GK +M+VARD V+QEVR+HFRPELLNRLDE+V+FDPLSHEQLRKVA
Sbjct: 720 TSNLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEMVIFDPLSHEQLRKVA 779
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
RLQMKDVA+RLAERGVALAVTDAALD++L+ +YDP+YGARPIRRW+EK+VVT+LS+ML++
Sbjct: 780 RLQMKDVAVRLAERGVALAVTDAALDVILSLAYDPVYGARPIRRWIEKRVVTQLSKMLIQ 839
Query: 827 EEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPN 873
EEIDEN TVYIDA+ K D L YRV ++GG V+A TG++SD+LIQ+PN
Sbjct: 840 EEIDENCTVYIDAADK-DELAYRVDRSGGLVNAETGQRSDILIQVPN 885
>gi|22535406|emb|CAC87117.1| heat shock protein 101 [Oryza sativa Japonica Group]
Length = 912
Score = 1498 bits (3879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 755/912 (82%), Positives = 828/912 (90%), Gaps = 18/912 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MNPD FTHKTNEA+ AHE+A+ AGHAQ TPLHL AL +D GI QAI+ A G +A
Sbjct: 1 MNPDNFTHKTNEALVAAHEIASEAGHAQLTPLHLVAALAADKGGILRQAISQASGGDAGA 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
S ERV + A+KKLPSQ+P PD +PAST LIKVIRRAQ+AQK GD+HLAVDQL+LGLL
Sbjct: 61 PDSFERVVSGALKKLPSQSPPPDSVPASTALIKVIRRAQSAQKKRGDSHLAVDQLLLGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
EDS I D KEAGV+ ARV++E+EKLRG EGRKVESASGDT FQALKTYGRDLVEQAGKL
Sbjct: 121 EDSLISDCLKEAGVSAARVRAELEKLRGGEGRKVESASGDTNFQALKTYGRDLVEQAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSVPDT+SILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALVVAAQLSARYI GRHLPDKAIDLV EA ANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVGEARANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+E HALEKEKDKASKARLVEV+KELDDLRDKLQPL M+Y+KEKERIDEIR+LKQ
Sbjct: 421 KRIQLEVEHHALEKEKDKASKARLVEVKKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADL+YGA+QE++ AI +LE +++ ENLMLTETVGP+QIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLKYGALQEIDVAIAKLE-SETGENLMLTETVGPEQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLAEAVN-----------AVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQN++ERL+GLA+ ++ AVAE+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNDEERLVGLADRLHQRVVGQAEAVSAVAEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+L+DEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILYDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGAEHLL+GM+GK +M+VARD V+QEVR+HFRPELLNRLDEIV+FDPLSHEQLRKVAR
Sbjct: 720 SNLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVAR 779
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA+RLA RGVALAVTDAALD++L+ SYDP+YGARPIRRW+EK+VVT+LS+ML++E
Sbjct: 780 LQMKDVAVRLAGRGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQE 839
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRT--DPSQAVKK 885
EIDEN TVYIDA+P D L YRV GG V+A TG+KSD+LIQ+PNG T D +QAVKK
Sbjct: 840 EIDENCTVYIDAAPHKDELAYRVDNRGGLVNAETGQKSDILIQVPNGAATGSDAAQAVKK 899
Query: 886 MKIEEIVDDDEM 897
M+I E D+D M
Sbjct: 900 MRIME--DEDGM 909
>gi|326515338|dbj|BAK03582.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 1472 bits (3811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 731/854 (85%), Positives = 792/854 (92%), Gaps = 15/854 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGEN--A 58
MNPDKFTHKTNEA+A AHE+A+ AGHAQ TPLHLA AL +D SGI QAI +A G N A
Sbjct: 1 MNPDKFTHKTNEALAAAHEMASEAGHAQLTPLHLAAALAADRSGILRQAIAHASGGNDAA 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+S ERV + A+K+LPSQ+P PD +PAST+L+K +RRAQ+AQK+ GD+HLAVDQLI+GLL
Sbjct: 61 VESFERVASTALKRLPSQSPPPDTVPASTSLVKAVRRAQSAQKSRGDSHLAVDQLIVGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
ED QI D KEAG + ARVK+EVEKLRG + R+VESASGDT FQALKTYGRDLVE AGKL
Sbjct: 121 EDPQISDALKEAGASAARVKAEVEKLRGGDNRRVESASGDTNFQALKTYGRDLVEVAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQR+VRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
+ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 VALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV VAEPSVPDTVSILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVLVAEPSVPDTVSILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALVVAAQLSARYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+ELHALE+EKDKASKARLV+VRKEL+DLRDKLQPL M+Y+KEKERIDEIR LKQ
Sbjct: 421 KRIQLEVELHALEREKDKASKARLVDVRKELEDLRDKLQPLQMKYRKEKERIDEIRSLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADLRYGA+QEV+AAI +LEG ++ ENLMLTETVGPDQIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLRYGALQEVDAAIARLEG-ETGENLMLTETVGPDQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQNEK RLIGLA EAVNAV E+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGAEHLL+GM+G +M+VARD V+QEVR+HFRPELLNRLDE+V+FDPLSHEQLRKVAR
Sbjct: 720 SNLGAEHLLAGMVGN-SMKVARDLVMQEVRRHFRPELLNRLDEMVIFDPLSHEQLRKVAR 778
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA RLAERGVALAVTDAALD++L+ SYDP+YGARPIRRW+EK++VTELS+ML+RE
Sbjct: 779 LQMKDVAARLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRIVTELSKMLIRE 838
Query: 828 EIDENSTVYIDASP 841
EIDENSTVY+DA+P
Sbjct: 839 EIDENSTVYVDAAP 852
>gi|168058716|ref|XP_001781353.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667246|gb|EDQ53881.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 1406 bits (3640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 686/913 (75%), Positives = 799/913 (87%), Gaps = 19/913 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINN-AGGENAA 59
MNP+KFTHKTNEA+A ELAT AGHAQ+TP+HL +ALL+D G+ QAI +GG+
Sbjct: 1 MNPEKFTHKTNEALAAGQELATEAGHAQYTPVHLTLALLNDNEGLLRQAIATVSGGDQTI 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
S ERV +KK+PSQ+PAPD PA+ LIK +++AQ+ QK+ GD+HLAVDQLIL LLE
Sbjct: 61 NSVERVLKNTLKKIPSQSPAPDASPANNALIKCLKKAQSLQKSRGDSHLAVDQLILALLE 120
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLD 179
D+QI D FKEAGV+ RVK E+E +RG +KV++A+GD+ FQALK YGRDLVE AGKLD
Sbjct: 121 DTQIADCFKEAGVSATRVKRELEAVRGS-SKKVDNATGDSNFQALKKYGRDLVEDAGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL +VRL+
Sbjct: 180 PVIGRDDEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLEVRLV 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
ALDMGALVAGAKYRGEFEERLKAVLKEVE+++GKVILFIDEIHLVLGAGRTEGSMDAANL
Sbjct: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEDSDGKVILFIDEIHLVLGAGRTEGSMDAANL 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARGQLRCIGATTL+EYRKYVEKDAAFERRFQQV V+EPS+ DT+SILRGLKE+YE
Sbjct: 300 LKPMLARGQLRCIGATTLDEYRKYVEKDAAFERRFQQVMVSEPSIADTISILRGLKERYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
GHHGVR+ DRALVVAAQLS+RYIT R LPDKAIDL+DEACANVRVQLDSQPEEID LER+
Sbjct: 360 GHHGVRLLDRALVVAAQLSSRYITSRFLPDKAIDLIDEACANVRVQLDSQPEEIDVLERR 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
R+QLE+E HA+EKEKDKASKARLVE+R+EL +L D+L+PL M+Y++EKER+DE+R+LKQK
Sbjct: 420 RIQLEVEAHAMEKEKDKASKARLVEIRQELQNLEDQLRPLKMKYQREKERVDELRKLKQK 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAE 539
RE+L +L +AERRYDLARAADL+YGA+ EV+ AI ++E +S EN MLTE+VGP+ IAE
Sbjct: 480 REDLQASLLDAERRYDLARAADLKYGALVEVDKAIQKMEQQESGENTMLTESVGPEHIAE 539
Query: 540 VVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPT 588
VVSRWTGIPVTRLGQNEK RL+GLA EAV AVAE++LRSRAGLGR QQPT
Sbjct: 540 VVSRWTGIPVTRLGQNEKARLLGLADRLHQRVVGQDEAVQAVAEAILRSRAGLGRQQQPT 599
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
GSFLFLGPTGVGKTELAKALAEQLFD EN LVR+DMSEYMEQHSV+RLIG+PPGYVGHEE
Sbjct: 600 GSFLFLGPTGVGKTELAKALAEQLFDKENQLVRMDMSEYMEQHSVARLIGSPPGYVGHEE 659
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTEAVRRRPYSVVLFDEVEKAH +VFNTLLQ+LDDGRLTDGQGRTVDF NTVIIMTS
Sbjct: 660 GGQLTEAVRRRPYSVVLFDEVEKAHPAVFNTLLQLLDDGRLTDGQGRTVDFTNTVIIMTS 719
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
NLGAEHLL G+ G ++M +A+++VL++VR HFRPELLNRLDEIVVF+PL H+QLRKVAR+
Sbjct: 720 NLGAEHLLMGLSGMMSMDIAKEKVLEQVRVHFRPELLNRLDEIVVFEPLKHDQLRKVARM 779
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
QMKDVA+RLAERGVALAVTDAALD+VL ESYDP+YGARP+RRWLE+KVVT LSRML+ +E
Sbjct: 780 QMKDVAVRLAERGVALAVTDAALDLVLTESYDPVYGARPLRRWLERKVVTNLSRMLINDE 839
Query: 829 IDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRTDPSQAVKKMKI 888
+D+NSTV+ID P + L Y V++NGG V++ TG+K+D+LI++P + D +K+M++
Sbjct: 840 VDDNSTVFIDVKPGENLLTYTVERNGGLVNSVTGKKADILIEVPRAEQHD----LKRMRV 895
Query: 889 EEIVD--DDEMVD 899
EE DDEM D
Sbjct: 896 EEPDSDLDDEMED 908
>gi|82408817|gb|ABB73202.1| heat shock protein 101 [Funaria hygrometrica]
Length = 908
Score = 1396 bits (3614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 685/913 (75%), Positives = 794/913 (86%), Gaps = 19/913 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNA-GGENAA 59
MNP+KFTHKTNEA+A ELAT AGHAQ+TP+HLA+ALL+D G+ QAI +A GG+
Sbjct: 1 MNPEKFTHKTNEALAAGQELATEAGHAQYTPVHLALALLNDSEGLLRQAIASASGGDQTL 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
S ERV +KK+PSQ PAPD PA+ LIK I++AQ+ QK+ D+HLAVDQLIL LLE
Sbjct: 61 NSVERVLKNTLKKIPSQNPAPDASPANNALIKCIKKAQSLQKSRSDSHLAVDQLILALLE 120
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLD 179
DSQI D FKEAGV+ RVK E+E +R + +KV++A+ D+ FQALK YGRDLVE A KLD
Sbjct: 121 DSQIADCFKEAGVSATRVKRELEAVR-RSSKKVDNANADSNFQALKKYGRDLVEDAAKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD PSNL +VRL+
Sbjct: 180 PVIGRDDEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDAPSNLLEVRLV 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
ALDMGALVAGAKYRGEFEERLKAVLKEVE+++GKVILFIDEIHLVLGAGRTEGSMDAANL
Sbjct: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEDSDGKVILFIDEIHLVLGAGRTEGSMDAANL 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARGQLRCIGATTL+EYRKYVEKDAAFERRFQQV V+EPSV DT+SILRGLKE+YE
Sbjct: 300 LKPMLARGQLRCIGATTLDEYRKYVEKDAAFERRFQQVMVSEPSVADTISILRGLKERYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
GHHGVR+ DRALVVAAQLS+RYIT R LPDKAIDL+DEACANVRVQLDSQPEEID LER+
Sbjct: 360 GHHGVRLLDRALVVAAQLSSRYITSRFLPDKAIDLIDEACANVRVQLDSQPEEIDVLERR 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
R+QLE+E HA+EKEKDKASKARL+EVR+EL +L D+L+ L M+Y++EKER+DE+R+LKQK
Sbjct: 420 RIQLEVEAHAMEKEKDKASKARLLEVRQELQNLEDQLRLLKMKYQREKERVDELRKLKQK 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAE 539
RE+L +L +AERRYDLARAAD +YGA+ EVE AI ++E +S EN MLTE+VGP+QIAE
Sbjct: 480 REDLQASLVDAERRYDLARAADFKYGALVEVEKAIQKMEQQESGENTMLTESVGPEQIAE 539
Query: 540 VVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPT 588
VVSRWTGIPVTRLGQNEK RL+ A EAV AVAE++LRSRAGLGR QQPT
Sbjct: 540 VVSRWTGIPVTRLGQNEKARLLAFADRLHERVVGQDEAVQAVAEAILRSRAGLGRQQQPT 599
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
GSFLFLGPTGVGKTELAKALAEQLFD EN LVR+DMSEYMEQHSVSRLIG+PPGYVGHEE
Sbjct: 600 GSFLFLGPTGVGKTELAKALAEQLFDKENQLVRMDMSEYMEQHSVSRLIGSPPGYVGHEE 659
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTEAVRRRPYSVVLFDEVEKAH +VFNTLLQ+LDDGRLTDGQGRTVDF NTV+IMTS
Sbjct: 660 GGQLTEAVRRRPYSVVLFDEVEKAHPAVFNTLLQLLDDGRLTDGQGRTVDFTNTVVIMTS 719
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
NLGAEHLL+G+ G ++M VA+++VL++VR HFRPELLNRLDEIVVF+PL H+QLRKVAR+
Sbjct: 720 NLGAEHLLAGLSGMMSMTVAKEKVLEQVRVHFRPELLNRLDEIVVFEPLKHDQLRKVARM 779
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
QMKDVA+RLAERGVALAVTDAALD+VL ESYDP+YGARP+RRWLE+KVVT LSRML+ +E
Sbjct: 780 QMKDVALRLAERGVALAVTDAALDLVLKESYDPVYGARPLRRWLERKVVTNLSRMLINDE 839
Query: 829 IDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRTDPSQAVKKMKI 888
+D+NSTV+ID P + L Y V++NGG V++ TG+K+D+LI++P + D VK++++
Sbjct: 840 VDDNSTVFIDVKPGENQLSYAVERNGGLVNSITGKKADILIEVPRVEQHD----VKRIRV 895
Query: 889 EEIVD--DDEMVD 899
EE DDEM D
Sbjct: 896 EEPDSDLDDEMED 908
>gi|302772230|ref|XP_002969533.1| hypothetical protein SELMODRAFT_170696 [Selaginella moellendorffii]
gi|300163009|gb|EFJ29621.1| hypothetical protein SELMODRAFT_170696 [Selaginella moellendorffii]
Length = 900
Score = 1381 bits (3575), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/899 (75%), Positives = 786/899 (87%), Gaps = 23/899 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNPD+FTHKT EA+A E+A S GHAQFTPLHLA+ LL+DP G+ QA+ G+ +A
Sbjct: 1 MNPDRFTHKTREALAAGQEMAQSMGHAQFTPLHLALVLLTDPEGLLKQAV----GDESAA 56
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
S ERV + + K+P Q P P+E+P ++ L K++R+A +AQK+ GDT+LAVDQLIL LLED
Sbjct: 57 SLERVLRRYLSKIPCQNPPPEEVPVNSALSKIVRKAHSAQKSKGDTYLAVDQLILALLED 116
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDP 180
SQ+ D EAG++ ++VKSE+EKLRG G+KVESA GDT F ALK YG+DLVE+AGKLDP
Sbjct: 117 SQLSDCLTEAGISPSKVKSELEKLRGS-GKKVESAGGDTNFDALKKYGKDLVEEAGKLDP 175
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD+PSNL+DVR+IA
Sbjct: 176 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDIPSNLSDVRVIA 235
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LDMGAL+AGAKYRGEFEERLKAVLKEVE+A+GKVILFIDE+HLVLGAGRTEGSMDAANLF
Sbjct: 236 LDMGALIAGAKYRGEFEERLKAVLKEVEDAQGKVILFIDEVHLVLGAGRTEGSMDAANLF 295
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARG LRCIGATTL EYRKYVEKDAAFERRFQQV V EPSVP+T+SILRGLKE+YEG
Sbjct: 296 KPMLARGTLRCIGATTLAEYRKYVEKDAAFERRFQQVLVKEPSVPETISILRGLKERYEG 355
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HHGVRI DRALVVAAQLS+RYI GRHLPDKAIDLVDEACANVRVQLDSQPEEID LER+R
Sbjct: 356 HHGVRIMDRALVVAAQLSSRYIAGRHLPDKAIDLVDEACANVRVQLDSQPEEIDKLERQR 415
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
+QLEIE+HALEKEKDKASK RLVEV +ELD+L++KLQPL MRY+KEKER+D++RRLK+KR
Sbjct: 416 IQLEIEMHALEKEKDKASKDRLVEVHQELDNLKEKLQPLKMRYQKEKERVDQLRRLKKKR 475
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAEV 540
EEL +LQEAERR DLARAAD+RYG +QE++AAI ++E +++EN MLTE VGP+QIAEV
Sbjct: 476 EELQISLQEAERRMDLARAADIRYGGLQEIDAAIARIE-KEAEENNMLTEAVGPEQIAEV 534
Query: 541 VSRWTGIPVTRLGQNEKERLIGLAEAVN-----------AVAESVLRSRAGLGRPQQPTG 589
VSRWTG+PV RLGQ++KERL+GL + ++ AVAE+VLRSRAGLGRP+QPTG
Sbjct: 535 VSRWTGVPVKRLGQDDKERLVGLGKRLHERVVGQDEAVEAVAEAVLRSRAGLGRPRQPTG 594
Query: 590 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 649
SF+FLGPTGVGKTELAKALAEQLFDDEN L+R+DMSEYMEQH+V+RLIGAPPGYVG+EEG
Sbjct: 595 SFMFLGPTGVGKTELAKALAEQLFDDENQLIRLDMSEYMEQHAVARLIGAPPGYVGYEEG 654
Query: 650 GQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 709
GQLTEAVRRRPYSV+LFDEVEKAH S+FNTLLQ+LDDGRLTDGQGRTV+F VIIMTSN
Sbjct: 655 GQLTEAVRRRPYSVILFDEVEKAHSSIFNTLLQLLDDGRLTDGQGRTVNFAECVIIMTSN 714
Query: 710 LGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQ 769
LGAEHLLSGM+G+ TM+ A+++V+ EVR+HFRPELLNRLD+IVVF PLSHEQLRKVAR+Q
Sbjct: 715 LGAEHLLSGMIGQTTMKAAKEKVMMEVRRHFRPELLNRLDDIVVFHPLSHEQLRKVARIQ 774
Query: 770 MKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEI 829
MK+VA+RLA+RGVAL V+DAALD VL+E+YDP+YGARPIRRWLEKKVVT+LSRML+ EI
Sbjct: 775 MKEVAMRLAQRGVALGVSDAALDHVLSEAYDPVYGARPIRRWLEKKVVTQLSRMLINGEI 834
Query: 830 DENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRTDPSQAVKKMKI 888
DENSTVYID P G LV RV KNG G DVLI +P+ + VKKM+I
Sbjct: 835 DENSTVYIDIRPGGTELVCRVDKNG------RGTDKDVLISVPSSTASSTDARVKKMRI 887
>gi|302810123|ref|XP_002986753.1| hypothetical protein SELMODRAFT_124842 [Selaginella moellendorffii]
gi|300145407|gb|EFJ12083.1| hypothetical protein SELMODRAFT_124842 [Selaginella moellendorffii]
Length = 900
Score = 1376 bits (3562), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 675/899 (75%), Positives = 786/899 (87%), Gaps = 23/899 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNPD+FTHKT EA+A E+A S GHAQFTPLHLA+ LL+DP G+ QA+ G+ +A
Sbjct: 1 MNPDRFTHKTREALAAGQEMAQSMGHAQFTPLHLALVLLTDPEGLLKQAV----GDESAA 56
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
S ERV + + K+P Q P P+E+P ++ L K++R+A +AQK+ GDT+LAVD+LIL LLED
Sbjct: 57 SLERVLRRYLSKIPCQNPPPEEVPVNSALSKIVRKAHSAQKSKGDTYLAVDRLILALLED 116
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDP 180
SQ+ D EAG++ ++VKSE+EKLRG G+KVESA GD+ F ALK YG+DLVE+AGKLDP
Sbjct: 117 SQLSDCLTEAGISPSKVKSELEKLRGS-GKKVESAGGDSNFDALKKYGKDLVEEAGKLDP 175
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD+PSNL+DVR+IA
Sbjct: 176 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDIPSNLSDVRVIA 235
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LDMGAL+AGAKYRGEFEERLKAVLKEVE+A+GKVILFIDE+HLVLGAGRTEGSMDAANLF
Sbjct: 236 LDMGALIAGAKYRGEFEERLKAVLKEVEDAQGKVILFIDEVHLVLGAGRTEGSMDAANLF 295
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARG LRCIGATTL EYRKYVEKDAAFERRFQQV V EPSVP+T+SILRGLKE+YEG
Sbjct: 296 KPMLARGTLRCIGATTLAEYRKYVEKDAAFERRFQQVLVKEPSVPETISILRGLKERYEG 355
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HHGVRI DRALVVAAQLS+RYI GRHLPDKAIDLVDEACANVRVQLDSQPEEID LER+R
Sbjct: 356 HHGVRIMDRALVVAAQLSSRYIAGRHLPDKAIDLVDEACANVRVQLDSQPEEIDKLERQR 415
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
+QLEIE+HALEKEKDKASK RLVEV +ELD+L++KLQPL MRY+KEKER+D++RRLK+KR
Sbjct: 416 IQLEIEMHALEKEKDKASKDRLVEVHQELDNLKEKLQPLKMRYQKEKERVDQLRRLKKKR 475
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAEV 540
EEL +LQEAERR DLARAAD+RYG +QE++AAI ++E +++EN MLTE VGP+QIAEV
Sbjct: 476 EELQISLQEAERRMDLARAADIRYGGLQEIDAAIARIE-KEAEENNMLTEAVGPEQIAEV 534
Query: 541 VSRWTGIPVTRLGQNEKERLIGLAEAVN-----------AVAESVLRSRAGLGRPQQPTG 589
VSRWTG+PV RLGQ++KERL+GL + ++ AVAE+VLRSRAGLGRP+QPTG
Sbjct: 535 VSRWTGVPVKRLGQDDKERLVGLGKRLHERVVGQDEAVEAVAEAVLRSRAGLGRPRQPTG 594
Query: 590 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 649
SF+FLGPTGVGKTELAKALAEQLFDDEN L+R+DMSEYMEQH+V+RLIGAPPGYVG+EEG
Sbjct: 595 SFMFLGPTGVGKTELAKALAEQLFDDENQLIRLDMSEYMEQHAVARLIGAPPGYVGYEEG 654
Query: 650 GQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 709
GQLTEAVRRRPYSV+LFDEVEKAH S+FNTLLQ+LDDGRLTDGQGRTV+F VIIMTSN
Sbjct: 655 GQLTEAVRRRPYSVILFDEVEKAHSSIFNTLLQLLDDGRLTDGQGRTVNFAECVIIMTSN 714
Query: 710 LGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQ 769
LGAEHLLSGM+G+ TM+ A+++V+ EVR+HFRPELLNRLD+IV+F PLSH+QLRKVAR+Q
Sbjct: 715 LGAEHLLSGMIGQTTMKAAKEKVMMEVRRHFRPELLNRLDDIVIFHPLSHDQLRKVARIQ 774
Query: 770 MKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEI 829
MK+VA+RLA+RGVAL V+DAALD VL+E+YDP+YGARPIRRWLEKKVVT+LSRML+ EI
Sbjct: 775 MKEVAMRLAQRGVALGVSDAALDHVLSEAYDPVYGARPIRRWLEKKVVTQLSRMLINGEI 834
Query: 830 DENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRTDPSQAVKKMKI 888
DENSTVYID P G LV RV KNG G DVLI +P+ + VKKM+I
Sbjct: 835 DENSTVYIDIRPGGTELVCRVDKNG------RGTDKDVLISVPSSTASSTDARVKKMRI 887
>gi|356519114|ref|XP_003528219.1| PREDICTED: chaperone protein ClpB1-like [Glycine max]
Length = 764
Score = 1327 bits (3433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 653/747 (87%), Positives = 700/747 (93%), Gaps = 12/747 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNPDKFTHKTNEA+ AHE+ATS GHAQFTPLHLA +L+SD GIF+QA++NA GE +A+
Sbjct: 1 MNPDKFTHKTNEALVSAHEIATSNGHAQFTPLHLASSLISDKDGIFSQALSNAAGEESAR 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+AERV N A+KKLPSQ+P PDE+PAS L+K IRRAQ QK GDTHLAVDQLILGLLED
Sbjct: 61 AAERVINNALKKLPSQSPLPDEVPASNALVKAIRRAQTLQKKRGDTHLAVDQLILGLLED 120
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDP 180
SQI +L EAGVA ++VKSEVE+LRGKEG+KVESA+GD+TFQALKTYGRDLVEQAGKLDP
Sbjct: 121 SQIAELLNEAGVAASKVKSEVERLRGKEGKKVESATGDSTFQALKTYGRDLVEQAGKLDP 180
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVPSNL+DV+LIA
Sbjct: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNLSDVKLIA 240
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LDMGALVAGAKYRGEFEERLKAVLKEVE+AEGKVILFIDEIHLVLGAG+ EGSMDAANLF
Sbjct: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEDAEGKVILFIDEIHLVLGAGKGEGSMDAANLF 300
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV DT+SILRGLKE+YEG
Sbjct: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVVDTISILRGLKERYEG 360
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HHGVRI DRALVVAAQLS+RYITGRHLPDKAIDLVDEACANVRVQLDS PEEIDNLERKR
Sbjct: 361 HHGVRILDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSHPEEIDNLERKR 420
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
MQLE+ELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMM+YKKEKERID IRRLKQKR
Sbjct: 421 MQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMKYKKEKERIDNIRRLKQKR 480
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAEV 540
EEL FALQEAERRYDLARAADLRYGAIQEVE+AI +LEGN ++ N+MLTETVGP+ IAEV
Sbjct: 481 EELNFALQEAERRYDLARAADLRYGAIQEVESAIQELEGN-NEGNVMLTETVGPEHIAEV 539
Query: 541 VSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPTG 589
VSRWTGIPVTRLGQN+KERLIGLA +AVNAVAE+VLRSRAGLGRPQQPTG
Sbjct: 540 VSRWTGIPVTRLGQNDKERLIGLADRLHQRVVGQDQAVNAVAEAVLRSRAGLGRPQQPTG 599
Query: 590 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 649
SFLFLGPTGVGKTEL+KALAEQLFDDEN LVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG
Sbjct: 600 SFLFLGPTGVGKTELSKALAEQLFDDENQLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 659
Query: 650 GQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 709
GQLTEA+RRRPYSVVLFDEVEKAH SVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN
Sbjct: 660 GQLTEAIRRRPYSVVLFDEVEKAHTSVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 719
Query: 710 LGAEHLLSGMMGKVTMQVARDQVLQEV 736
LGAEHLL+G+ GK +MQVARD+V+QEV
Sbjct: 720 LGAEHLLTGLSGKSSMQVARDRVMQEV 746
>gi|297804822|ref|XP_002870295.1| hypothetical protein ARALYDRAFT_915385 [Arabidopsis lyrata subsp.
lyrata]
gi|297316131|gb|EFH46554.1| hypothetical protein ARALYDRAFT_915385 [Arabidopsis lyrata subsp.
lyrata]
Length = 920
Score = 1162 bits (3006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/951 (64%), Positives = 720/951 (75%), Gaps = 88/951 (9%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG-ENAA 59
MN +F K +A A LA + H Q TPLHL V L+SD +G+F +AI AGG E A
Sbjct: 1 MNYTRFDPKVQLILAKARTLAIVSSHVQVTPLHLGVGLISDKTGVFYRAITTAGGSELLA 60
Query: 60 QSAERVFNQAMKKLPSQTPAP-----------------------------------DEIP 84
QSA +V QA+KKLP Q P P + IP
Sbjct: 61 QSAVKVIKQALKKLPKQVPPPTGAIPRYPSRKNLPKQTPPISNGAIPQYPGLNIPQNPIP 120
Query: 85 AST--------TLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGDLFKEAGVAVAR 136
T +L+ V+ RAQ G+T + V+ L++ LL+DSQI DL KEAG +
Sbjct: 121 FLTRTIPQNNASLVMVLNRAQTKP---GETSVGVEALVISLLDDSQIRDLLKEAGSVPEK 177
Query: 137 VKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDPVIGRDEEIRRVVRILS 196
VKSEVEKL G+ QALKTYG DLVEQ GKLDPVIGRD+EIRRVV ILS
Sbjct: 178 VKSEVEKL-----------GGEVNLQALKTYGIDLVEQVGKLDPVIGRDKEIRRVVGILS 226
Query: 197 RRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEF 256
RRTKNNPVLIGEPGVGKTAVVEGLAQRI++GDVP NL DV+L +LD+GA+VAG RG+F
Sbjct: 227 RRTKNNPVLIGEPGVGKTAVVEGLAQRILKGDVPINLTDVKLFSLDLGAMVAGTTLRGQF 286
Query: 257 EERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATT 316
EERLK+VLKEVE A+GKV+LFIDEIH+ LGAG+ GS DAANL KPMLARGQLRCIGATT
Sbjct: 287 EERLKSVLKEVENAQGKVVLFIDEIHMALGAGKASGSTDAANLLKPMLARGQLRCIGATT 346
Query: 317 LEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQ 376
LEEYR ++EKDAAFERRFQQVYVAEPSVPDT+SILRGLKEKYEGHHGVRIQD ALVV+AQ
Sbjct: 347 LEEYRTHIEKDAAFERRFQQVYVAEPSVPDTISILRGLKEKYEGHHGVRIQDSALVVSAQ 406
Query: 377 LSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIELHALEKEK-D 435
LSARYIT R LPDKAIDLVDE+CA+VRVQLDSQPEEID LERK MQL+IE+HALEKEK D
Sbjct: 407 LSARYITARRLPDKAIDLVDESCAHVRVQLDSQPEEIDYLERKTMQLKIEIHALEKEKDD 466
Query: 436 KASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREELLFALQEAERRYD 495
KAS+ARLVEVRKELDDLRDKL+PL ++YK EK I+E R LKQKR+EL+ ALQEAER+YD
Sbjct: 467 KASEARLVEVRKELDDLRDKLEPLTIKYKNEKRIINETRSLKQKRDELMIALQEAERQYD 526
Query: 496 LARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQN 555
L +AADLRYGAIQEVE+AI +LE + D N+MLTETVGP+ IAEVVSRWTGIPVT L QN
Sbjct: 527 LPKAADLRYGAIQEVESAIAKLEKSVKD-NVMLTETVGPENIAEVVSRWTGIPVTALDQN 585
Query: 556 EKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTEL 604
EK+RLI LA EAV AVA ++LRSR GLGRPQQP+GSFLFLGPTGVGKTEL
Sbjct: 586 EKKRLISLADRLHERVVGQDEAVKAVAAAILRSRVGLGRPQQPSGSFLFLGPTGVGKTEL 645
Query: 605 AKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVV 664
AKALAEQLF DENLLVR+DMSEYM++ +V++LIGAPPGY+GHEEGGQLTE VRRRPY VV
Sbjct: 646 AKALAEQLFYDENLLVRLDMSEYMDRSTVNKLIGAPPGYIGHEEGGQLTEPVRRRPYCVV 705
Query: 665 LFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVT 724
LFDEVEKA+++VFNTLLQVL+DGRLTD GRTVDF+NTVIIMTSNLGA+HL+SG+ G+VT
Sbjct: 706 LFDEVEKANVTVFNTLLQVLEDGRLTDSHGRTVDFKNTVIIMTSNLGADHLISGLTGEVT 765
Query: 725 MQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVAL 784
MQVARD ++EV+KHFRPELLNRLDEIV+F PLSHE L K+ +LQ+ +VA RLAE+GV++
Sbjct: 766 MQVARDNTMKEVKKHFRPELLNRLDEIVMFHPLSHEHLTKIVQLQVNNVANRLAEKGVSM 825
Query: 785 AVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYIDASPKGD 844
V ++ + +R LE+ VVT++S M+VREEID++S V ID +
Sbjct: 826 TVCIG------------LHFSSELR--LERNVVTDISMMIVREEIDDDSIVCIDVNVDKT 871
Query: 845 NLVYRVQKNGGFVDAATGRKSDVLIQIPNG-PRTDPSQAVKKMKIEEIVDD 894
+LVY++ +N V T + SDV+I N R++ KK+K E IV D
Sbjct: 872 DLVYQIDEN--VVAKKTEQTSDVVIHSRNKRGRSNEETLTKKIKSEVIVID 920
>gi|7435720|pir||D71409 probable endopeptidase Clp ATP-binding chain - Arabidopsis thaliana
Length = 831
Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/913 (62%), Positives = 676/913 (74%), Gaps = 101/913 (11%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG-GENAA 59
MN KF +A A A S H Q TPLHL V L+SD + +F +AI +AG G+ +A
Sbjct: 1 MNDLKFDPNVKLILASARSHAMSLSHGQVTPLHLGVTLISDLTSVFYRAITSAGDGDISA 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
QS V NQ++ KL ++ GDT + V L++ LLE
Sbjct: 61 QSVVNVINQSLYKL-------------------------TKRNLGDTKVGVAVLVISLLE 95
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLD 179
DSQI D+ KEAGV +VKSEVEKLRG + +ALKTYG DLVEQAGKLD
Sbjct: 96 DSQISDVLKEAGVVPEKVKSEVEKLRG-----------EVILRALKTYGTDLVEQAGKLD 144
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGR EIRRV+ +LSRRTKNNPVLIGEPGVGKTAVVEGLAQRI++GDVP NL V+LI
Sbjct: 145 PVIGRHREIRRVIEVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKGDVPINLTGVKLI 204
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+L+ GA+VAG RG+FEERLK+VLK VEEA+GKV+LFIDEIH+ LGA + GS DAA L
Sbjct: 205 SLEFGAMVAGTTLRGQFEERLKSVLKAVEEAQGKVVLFIDEIHMALGACKASGSTDAAKL 264
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARGQLR IGATTLEEYR +VEKDAAFERRFQQV+VAEPSVPDT+SILRGLKEKYE
Sbjct: 265 LKPMLARGQLRFIGATTLEEYRTHVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKYE 324
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
GHHGVRIQDRALV++AQLS RYITGR LPDKAIDLVDE+CA+V+ QLD QPEEID+LERK
Sbjct: 325 GHHGVRIQDRALVLSAQLSERYITGRRLPDKAIDLVDESCAHVKAQLDIQPEEIDSLERK 384
Query: 420 RMQLEIELHALEKEK-DKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
MQLEIE+HALEKEK DKAS+ARL EVRKELDDLRDKL+PL ++YKKEK+ I+E RRLKQ
Sbjct: 385 VMQLEIEIHALEKEKDDKASEARLSEVRKELDDLRDKLEPLTIKYKKEKKIINETRRLKQ 444
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
R++L+ ALQEAER++D+ +AA L+YGAIQEVE+AI +LE + D N+MLTETVGP+ IA
Sbjct: 445 NRDDLMIALQEAERQHDVPKAAVLKYGAIQEVESAIAKLEKSAKD-NVMLTETVGPENIA 503
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRL QNEK+RLI LA EAV AVA ++LRSR GLGRPQQP
Sbjct: 504 EVVSRWTGIPVTRLDQNEKKRLISLADKLHERVVGQDEAVKAVAAAILRSRVGLGRPQQP 563
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG-YVGH 646
+GSFLFLGPTGVGKTELAKALAEQLFD ENLLVR+DMSEY ++ SV++LIGAPPG Y+GH
Sbjct: 564 SGSFLFLGPTGVGKTELAKALAEQLFDSENLLVRLDMSEYNDKFSVNKLIGAPPGYYIGH 623
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTE VRRRPY VVLFDEVEK H++VFNTLLQ GRTVDF+NTVIIM
Sbjct: 624 EEGGQLTEPVRRRPYCVVLFDEVEKTHVTVFNTLLQ----------HGRTVDFKNTVIIM 673
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLGA+HL+SG+ G++TMQVARD +++ +KHFRPELLNRLDEIV+F PLSHE L K+
Sbjct: 674 TSNLGADHLVSGLTGEMTMQVARDNAMKDAKKHFRPELLNRLDEIVMFHPLSHEHLAKIV 733
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+LQ+K+V PIRRWLE+KVVT++S M+VR
Sbjct: 734 QLQVKNVV--------------------------------PIRRWLERKVVTDISMMIVR 761
Query: 827 EEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPN--GPRTDPSQAV- 883
EEI ++S V ID + +LVYR+ KN V + DV+I N G D V
Sbjct: 762 EEIGDDSIVCIDVNEAKTDLVYRIDKN---VFVKIEQTLDVVIHSGNKRGRSNDEDHIVT 818
Query: 884 --KKMKIEEIVDD 894
KK+K E +V D
Sbjct: 819 LTKKIKNEVVVID 831
>gi|330795076|ref|XP_003285601.1| hypothetical protein DICPUDRAFT_46211 [Dictyostelium purpureum]
gi|325084423|gb|EGC37851.1| hypothetical protein DICPUDRAFT_46211 [Dictyostelium purpureum]
Length = 882
Score = 1052 bits (2720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/869 (60%), Positives = 668/869 (76%), Gaps = 26/869 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+NP++FT KTN + A ELA ++Q P+HLAV+L++D + AGG+
Sbjct: 3 LNPEEFTEKTNSILIKAQELAREKSNSQLAPIHLAVSLMNDEDSLAKSIYEKAGGDIPKI 62
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
A F + + K+P Q P P +I ++ ++++R A QK +GD+HLA+D LIL LL+D
Sbjct: 63 DAG--FKRLLNKVPVQQPVPADISPNSLFVQILRSASRYQKNNGDSHLALDHLILALLDD 120
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
I + +AG +V V+++RG +K+ S S ++T+ AL YG DLV+QA GKL
Sbjct: 121 RDILSVLGDAGATKEQVMQAVKEIRG--NKKITSKSAESTYDALSKYGYDLVQQAQEGKL 178
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRRV+R+LSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD+P NL + R+
Sbjct: 179 DPVIGRDDEIRRVIRVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDIPDNL-NARV 237
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRG+FEERLKAVLKEV+++ G +ILFIDEIHLVLGAG+T+G+MDAAN
Sbjct: 238 IALDMGALIAGAKYRGDFEERLKAVLKEVKDSNGGIILFIDEIHLVLGAGKTDGAMDAAN 297
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYR+YVEKD AFERRFQQV+V EPSV DT+SILRGLKE+Y
Sbjct: 298 LLKPMLARGELRCIGATTLDEYRQYVEKDPAFERRFQQVFVNEPSVNDTISILRGLKERY 357
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALVVAAQLS RYIT R LPDKAIDLVDEACAN RVQL+SQPE IDNLER
Sbjct: 358 ENHHGVRITDTALVVAAQLSHRYITNRFLPDKAIDLVDEACANTRVQLNSQPEAIDNLER 417
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+++QLE+E ALEKE+D SK RL VR EL+++ D+LQPL +Y+KE+ R+D+IR L++
Sbjct: 418 RKLQLEVEATALEKEEDDGSKQRLAAVRDELNNITDELQPLQAKYQKERTRVDKIRELRR 477
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQ--LEGNQSDENLMLTETVGPDQ 536
K E++ L +AERRYD +AAD RY I ++E I Q +E QS ++ +++E V P+Q
Sbjct: 478 KLEDIKVKLLDAERRYDTQQAADYRYYVIPDLEKQIQQCEVERKQSKKDALVSEVVTPEQ 537
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA+VVSRWTGIPV++L Q EK+RL +G EAV+AVA++VLRS++GL R
Sbjct: 538 IADVVSRWTGIPVSKLSQTEKQRLLHLGEHLHKRVVGQDEAVDAVADAVLRSKSGLAREN 597
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
QP GSFLFLGPTGVGKTELAKALA +LFDDE ++RIDMSEYMEQHSVSRLIGAPPGYVG
Sbjct: 598 QPLGSFLFLGPTGVGKTELAKALAFELFDDEKHMIRIDMSEYMEQHSVSRLIGAPPGYVG 657
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+++GGQLTEAVRRRPYSVVLFDEVEKAH V+N LLQVLDDGRLTDGQGRTVDF N VII
Sbjct: 658 YDQGGQLTEAVRRRPYSVVLFDEVEKAHQQVWNVLLQVLDDGRLTDGQGRTVDFSNVVII 717
Query: 706 MTSNLGAEHLLSGMMGKVTM----QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
MTSNLG++++L + Q +D+V EVRKHFRPE LNRLD+I+VF PLS
Sbjct: 718 MTSNLGSQYILQEQSNQDNFSTLSQSCKDKVTNEVRKHFRPEFLNRLDDIIVFSPLSKNN 777
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L + LQ++ V RL + +++ V ALD ++A+SYD I+GARP+RR+LEK +VTELS
Sbjct: 778 LHGIINLQLQSVEKRLEAQNMSMTVEKDALDSIIAKSYDAIFGARPLRRYLEKNIVTELS 837
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRV 850
++++ ++ E+ ++D K ++L +++
Sbjct: 838 KLILSGQLKEHQ--HVDIIEKDNHLDFKI 864
>gi|66802530|ref|XP_635137.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
gi|60463456|gb|EAL61641.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
Length = 886
Score = 1050 bits (2715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/858 (61%), Positives = 662/858 (77%), Gaps = 25/858 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP++FT KTN + ELA + Q P+HLAV LL+D + AGG+
Sbjct: 3 FNPEEFTDKTNTILLRTQELAREKSNVQLAPIHLAVTLLNDEDNLAKSIFEKAGGDVPKI 62
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
A F + + K P Q P P EI ++ ++V+R A QK +GD+HLAVD LILGLL+D
Sbjct: 63 DAG--FKRLLAKQPVQNPVPPEISPNSLFLQVLRSAARHQKNNGDSHLAVDHLILGLLDD 120
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
I + +AG +V V+++RG +K+ S + ++T++AL YG DLV QA GKL
Sbjct: 121 RDILSVLGDAGATKEQVIQAVKEIRG--NKKITSKTAESTYEALSKYGYDLVSQAQEGKL 178
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRV+R+LSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD+P NL + R+
Sbjct: 179 DPVIGRDEEIRRVIRVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDIPDNL-NARV 237
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRG+FEERLKAVLKEV+++ G +ILFIDEIHLVLGAG+T+G+MDAAN
Sbjct: 238 IALDMGALIAGAKYRGDFEERLKAVLKEVKDSNGGIILFIDEIHLVLGAGKTDGAMDAAN 297
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYR+YVEKD AFERRFQQV+V EP+V DT+SILRGLKE+Y
Sbjct: 298 LLKPMLARGELRCIGATTLDEYRQYVEKDPAFERRFQQVFVNEPTVNDTISILRGLKERY 357
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALVVAAQLS RYIT R LPDKAIDLVDEACAN RVQL+SQPE IDNLER
Sbjct: 358 ETHHGVRITDNALVVAAQLSHRYITNRFLPDKAIDLVDEACANTRVQLNSQPEAIDNLER 417
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+R+QLE+E ALEKE+D ASK RL V++EL+ ++D+LQPL +Y+KE+ R+D+IR L++
Sbjct: 418 RRLQLEVESAALEKEEDDASKQRLKAVQEELNQIKDELQPLEAKYQKERSRVDKIRELRK 477
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAI--GQLEGNQSDENLMLTETVGPDQ 536
K E++ L +AERRYD + AAD RY I ++E I E ++ ++ M++E V P+Q
Sbjct: 478 KLEDIKVKLSDAERRYDTSAAADYRYFVIPDLEKQIEVCDKERKENKKDAMVSEVVTPEQ 537
Query: 537 IAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQ 585
IA+VVSRWTGIPV++L Q EK+RL+ LA EAV+AVA++VLRS++GL R
Sbjct: 538 IADVVSRWTGIPVSKLSQTEKQRLLSLADHLHNRVVGQDEAVDAVADAVLRSKSGLAREN 597
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
QP GSFLFLGPTGVGKTELAKALA +LFDDE+ +VRIDMSEYMEQHSVSRLIGAPPGYVG
Sbjct: 598 QPLGSFLFLGPTGVGKTELAKALALELFDDESHMVRIDMSEYMEQHSVSRLIGAPPGYVG 657
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+++GGQLTEAVRRRPYSVVLFDEVEKAH V+N LLQVLD+GRLTDGQGRTVDF N VII
Sbjct: 658 YDQGGQLTEAVRRRPYSVVLFDEVEKAHQQVWNVLLQVLDEGRLTDGQGRTVDFSNVVII 717
Query: 706 MTSNLGAEHLLSGMMGK-----VTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
MTSNLG++++L K Q +D+V+ EVRKHFRPE LNRLD+I+VF PLS E
Sbjct: 718 MTSNLGSQYILGEQANKEGGNNSLSQACKDKVIDEVRKHFRPEFLNRLDDIIVFTPLSKE 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
L + LQ++ V RL ++ ++L +++ ALD ++ +YDPI+G RP++R++EK +VTEL
Sbjct: 778 NLHSIITLQLRSVEKRLEDQNMSLKISNDALDSIINAAYDPIFGGRPLKRYIEKNIVTEL 837
Query: 821 SRMLVREEIDENSTVYID 838
S++++ ++ EN V ++
Sbjct: 838 SKLILGGKLKENQGVVVN 855
>gi|281205439|gb|EFA79630.1| AAA ATPase domain-containing protein [Polysphondylium pallidum
PN500]
Length = 880
Score = 1037 bits (2681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/857 (60%), Positives = 658/857 (76%), Gaps = 24/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+NP+ FT KTN + + ELA + Q TP HL ALLSD + AGG+
Sbjct: 3 LNPETFTEKTNSILLASQELAREKCNTQLTPAHLLQALLSDEDHLATTIFEKAGGD--IN 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E + ++ LP Q P P +I ++++I V+R A QK +GD+HLAVD LILGLLED
Sbjct: 61 KIENGTKRLLQTLPVQRPPPQDISPNSSMINVLRTAAKNQKNNGDSHLAVDHLILGLLED 120
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ + + G +V++ V+++RG +K+ SA+ ++T++AL YG DLV A GKL
Sbjct: 121 PSVLSVLGDGGARKDQVQAAVKEVRG--NKKITSATAESTYEALSKYGHDLVADAATGKL 178
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRRV+R+LSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GD+P NL + ++
Sbjct: 179 DPVIGRDDEIRRVIRVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVHGDIPDNL-NCKV 237
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFEERLKAVLK+V+E+ G +ILFIDEIHLVLGAG+T+G+MDAAN
Sbjct: 238 IALDMGALIAGAKYRGEFEERLKAVLKDVKESNGGIILFIDEIHLVLGAGKTDGAMDAAN 297
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKYVEKD AFERRFQQV V+EPSV DT+SILRGLKE+Y
Sbjct: 298 LLKPMLARGELRCIGATTLDEYRKYVEKDPAFERRFQQVMVSEPSVSDTISILRGLKERY 357
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D +LVVAAQLS RYIT R LPDKAIDL+DEACAN+RVQL+SQPE ID LER
Sbjct: 358 EAHHGVRITDNSLVVAAQLSHRYITNRFLPDKAIDLLDEACANIRVQLNSQPEAIDQLER 417
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+++QLE+E ALEKE+D SK RL +V++EL ++D+L PL Y+KE+ R+D+IR L++
Sbjct: 418 RKLQLEVEKTALEKEEDDQSKHRLEDVKEELAKIQDELTPLQAIYQKERSRVDKIRDLRK 477
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAI--GQLEGNQSDENLMLTETVGPDQ 536
K E++ L +AERRYDL ADL+Y I ++E I +E + ++ +++ETV +Q
Sbjct: 478 KLEDVKVKLADAERRYDLQLVADLKYYVIPDLEKQIENCNIERKDAKKDSLVSETVTSEQ 537
Query: 537 IAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRPQ 585
IAEVVSRWTGIPVT+L Q EK ER++G EAV+AVA++VLRSRAGL R
Sbjct: 538 IAEVVSRWTGIPVTKLSQTEKQRTLSLGKHLHERVVGQDEAVDAVADAVLRSRAGLARLN 597
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
QP GSFLFLGPTGVGKTELAKALA +LFDDE ++RIDMSEYMEQH+V+RLIGAPPGYVG
Sbjct: 598 QPLGSFLFLGPTGVGKTELAKALAVELFDDEKHMIRIDMSEYMEQHAVARLIGAPPGYVG 657
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+++GGQLTEAVRR+PYSVVLFDEVEKAH V+N LLQVLDDGRLTDGQGRT+DF N VII
Sbjct: 658 YDQGGQLTEAVRRKPYSVVLFDEVEKAHPQVWNVLLQVLDDGRLTDGQGRTIDFSNVVII 717
Query: 706 MTSNLGAEHLLSGMMGKV----TMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+TSNLG+++LL+ ++ Q +DQV+ EVRKHFRPE LNRLD+IVVF PL+
Sbjct: 718 LTSNLGSQYLLAESNAEIFNTGLSQHVKDQVINEVRKHFRPEFLNRLDDIVVFSPLTKAN 777
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L + LQ++ V RL + +++ V+ A+D +L +YDP YGARP++R+LEK +VTELS
Sbjct: 778 LESIITLQLRSVTKRLESQNISVNVSKPAMDSILKSAYDPSYGARPLKRYLEKHIVTELS 837
Query: 822 RMLVREEIDENSTVYID 838
++++ ++ ENS V ID
Sbjct: 838 KLILAGDLKENSHVDID 854
>gi|328871453|gb|EGG19823.1| AAA ATPase domain-containing protein [Dictyostelium fasciculatum]
Length = 892
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/852 (59%), Positives = 658/852 (77%), Gaps = 20/852 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP+ FT KTN + A ELA + Q TP+HL VAL+ D + AGG+
Sbjct: 1 MNPETFTQKTNSILLKAQELAREKENTQLTPIHLFVALIQDEDALAKTIFEKAGGD--FN 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
ER +A+ + P+Q P P++I + +L ++R A QK +GD+HLA+D L++ LLED
Sbjct: 59 KIERAALRALSQFPTQHPPPNDISPNNSLANILRTAVKLQKNNGDSHLALDHLLVALLED 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAGKL 178
S + + +AG +VK+ V+++RG +K+ S S ++T++AL YG DLV Q+GKL
Sbjct: 119 STVLSILGDAGAGKEQVKAAVKEVRG--NKKITSESAESTYEALSKYGHDLVADAQSGKL 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRRV+R+LSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD+P NL + R+
Sbjct: 177 DPVIGRDDEIRRVIRVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDIPDNL-NARV 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAKYRGEFEERLKAVLKEV+++ G +ILFIDEIHLVLGAG+T+G+MDAAN
Sbjct: 236 ISLDMGALIAGAKYRGEFEERLKAVLKEVKDSNGGIILFIDEIHLVLGAGKTDGAMDAAN 295
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKYVEKD AFERRFQQV V EP+V DT+SILRGLKE+Y
Sbjct: 296 LLKPMLARGELRCIGATTLDEYRKYVEKDPAFERRFQQVQVDEPTVNDTISILRGLKERY 355
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALVV+AQL+ RYIT R LPDKAIDL+DEACAN+RVQL+SQPE ID LER
Sbjct: 356 ETHHGVRITDTALVVSAQLANRYITNRFLPDKAIDLLDEACANIRVQLNSQPEAIDQLER 415
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+++QL++E ALEKE+D SK RL V++EL + D+LQPLM RY+ E+ R+D+ R L++
Sbjct: 416 RKLQLQVEQTALEKEEDDGSKHRLETVKEELAKIEDELQPLMARYQSERSRVDKSRDLRK 475
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL--EGNQSDENLMLTETVGPDQ 536
K E++ LQ+AERR+DL ADLRY I ++E I E ++ ++ +++E V P+
Sbjct: 476 KLEDVRVKLQDAERRHDLQLVADLRYYVIPDLEKQIESTNKERKEAKKDDLVSEIVTPEN 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQ 585
IAEVV+RWTGIPV++L Q E++R + LA EAV+AVA++V+RS+AGL R
Sbjct: 536 IAEVVARWTGIPVSKLSQTERQRTLHLADHLHQRVVGQYEAVDAVADAVMRSKAGLARLN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
QP GSFLFLGPTGVGKTELAKALA +LFDDE +VRIDMSE+MEQHSV+RLIGAPPGYVG
Sbjct: 596 QPLGSFLFLGPTGVGKTELAKALAYELFDDEKHMVRIDMSEFMEQHSVARLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGGQL+EAVRR+PYSVVLFDEVEKAH V+N LLQVLDDGRLTDG+G+TVDF N VII
Sbjct: 656 YDEGGQLSEAVRRKPYSVVLFDEVEKAHPQVWNVLLQVLDDGRLTDGKGKTVDFSNVVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLG+++LL+ + Q +D V+ EVRKHFRPE LNRLD++V+F PLS + L +
Sbjct: 716 MTSNLGSQYLLAEAQLETISQHVKDSVMGEVRKHFRPEFLNRLDDMVIFSPLSKKNLESI 775
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
LQ+ V RL ++ +++ V A+D +L ++YDP+YGARP++R+LEK +VTELS++++
Sbjct: 776 VTLQLGSVTKRLEQQNISIKVDLKAIDYILQQAYDPVYGARPLKRFLEKNIVTELSKLIL 835
Query: 826 REEIDENSTVYI 837
E+ EN V +
Sbjct: 836 AGELHENCLVTV 847
>gi|452825606|gb|EME32602.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Galdieria
sulphuraria]
Length = 922
Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/897 (59%), Positives = 664/897 (74%), Gaps = 52/897 (5%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN D T K EAI +HELA GH+Q TPLHLA AL ++ G+ + A +
Sbjct: 1 MNLDNLTDKAQEAIQASHELALENGHSQLTPLHLAAALFTEDHGLASSVATKAKADPV-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ R +A+ +LPSQ P P +P S + +KVIR AQ+ +K GDTHLAVD L++ L +D
Sbjct: 59 NVRRELQKAVIRLPSQDPPPTTVPPSQSFLKVIRDAQSLRKKQGDTHLAVDHLLIALCDD 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ F A + ++ V+ +RG RKV+S + D+T+ AL Y +D V A GKL
Sbjct: 119 KDVIACFSSADLTKHALEEAVKSVRG--NRKVDSKAADSTYDALNQYAQDFVALAEEGKL 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRRV+R+L RR KNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP NL + RL
Sbjct: 177 DPVIGRDDEIRRVIRVLCRRRKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPENL-NCRL 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
ALDMGALVAGAKYRGEFEERLKAVL+EV+E EGK+ILFIDE+HLVLGAG+++G+MDAAN
Sbjct: 236 YALDMGALVAGAKYRGEFEERLKAVLREVKEGEGKIILFIDELHLVLGAGKSDGAMDAAN 295
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTLEEYRKYVEKDAAFERRFQQV+V+EPSVPDTVSILRGLKE+Y
Sbjct: 296 LLKPMLARGELRCIGATTLEEYRKYVEKDAAFERRFQQVFVSEPSVPDTVSILRGLKERY 355
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA+LSARYIT R LPDKAIDLVDEACANVR+QLDSQPE ID LE
Sbjct: 356 EVHHGVRILDSALVAAAKLSARYITNRFLPDKAIDLVDEACANVRMQLDSQPEVIDTLEH 415
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+++QLEIE+ ALEKEKD+AS+ARL V++ELD++ +KL+PL R++ E+ +++E++ +
Sbjct: 416 RKLQLEIEIAALEKEKDEASRARLAAVKEELDNVNEKLRPLKARFESERGKMNELKDMMT 475
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----------QSDENL-- 526
K + L L +AERR D +AADLRY AI E+E I L+ ++DE
Sbjct: 476 KLDALKIKLADAERRRDTVQAADLRYYAIPEIEERIRSLKNEIDKEKETDAMETDEESGK 535
Query: 527 MLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVL 575
+L++ VG +QIA+VVSRWTGIP T+L Q++ ERL+ L+ EAV+AVA +VL
Sbjct: 536 LLSDVVGYEQIADVVSRWTGIPTTKLSQSDAERLLSLSASLHQRIIGQDEAVDAVAAAVL 595
Query: 576 RSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSR 635
RSRAG+ RP QP GSFLFLGPTGVGKTELAKALA +LFDDE +VRID SEYMEQHSVSR
Sbjct: 596 RSRAGVSRPTQPLGSFLFLGPTGVGKTELAKALAAELFDDEKHVVRIDCSEYMEQHSVSR 655
Query: 636 LIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGR 695
LIGAPPGYVG+EEGGQLTEAV RRPY+VVLFDEVEKAH +V N LLQVLDDGRLTD QGR
Sbjct: 656 LIGAPPGYVGYEEGGQLTEAVLRRPYNVVLFDEVEKAHRNVMNVLLQVLDDGRLTDNQGR 715
Query: 696 TVDFRNTVIIMTSNLGAEHLLS-GMMGKVTMQVARDQ---------------------VL 733
T+DF NTVII+TSNLGA+ L++ G G + D V+
Sbjct: 716 TIDFTNTVIILTSNLGAQFLMNIGSKGPAELSEGSDHEGTPVVSIPKEATIDNRTREAVM 775
Query: 734 QEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDI 793
+EV+ HFRPE LNRLD+IV+F PL+ ++LR++ RLQ+ VA RL ER + +++ + A D
Sbjct: 776 REVKLHFRPEFLNRLDDIVIFKPLALDELRQIVRLQLDQVAKRLEERDITVSMDNRAADY 835
Query: 794 VLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRV 850
+L E+YDP +GARPIRR+LEK V TELS L++ + +S V + + +G L ++V
Sbjct: 836 ILREAYDPSFGARPIRRYLEKHVATELSIRLIKGLLTNHSHVQVTRATEGSGLAFQV 892
>gi|297850252|ref|XP_002893007.1| hypothetical protein ARALYDRAFT_889286 [Arabidopsis lyrata subsp.
lyrata]
gi|297338849|gb|EFH69266.1| hypothetical protein ARALYDRAFT_889286 [Arabidopsis lyrata subsp.
lyrata]
Length = 695
Score = 1013 bits (2620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/707 (71%), Positives = 588/707 (83%), Gaps = 53/707 (7%)
Query: 163 ALKTYGRDLVEQAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQ 222
LKTYGRDL++QA KL+ NNP+LIGE GVGKTAVVEGLAQ
Sbjct: 9 GLKTYGRDLIKQAEKLE---------------------NNPILIGEAGVGKTAVVEGLAQ 47
Query: 223 RIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIH 282
RI GDVP+ L DV L+ALDM AL AGA Y G+FEERLK VL+EV+EA+GK++LFIDEIH
Sbjct: 48 RIFNGDVPNFLTDVTLVALDMCALAAGASYPGQFEERLKDVLEEVKEAQGKIVLFIDEIH 107
Query: 283 LVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEP 342
+VLGAG G+++AAN FKPMLARGQLRCIGATT +EY Y+EKDAAFERRFQ
Sbjct: 108 MVLGAG---GAIEAANFFKPMLARGQLRCIGATTRDEYSTYLEKDAAFERRFQ------- 157
Query: 343 SVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANV 402
GLKEKYE HHGV IQD ALVV+AQLSARYITGR LPDKAIDLVDEACA V
Sbjct: 158 ----------GLKEKYELHHGVSIQDTALVVSAQLSARYITGRKLPDKAIDLVDEACAYV 207
Query: 403 RVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMR 462
RVQLDSQPEEID+ ERKRMQL+IELHALEK+KDKAS ARLV+V+KELDDLRDKLQPL +R
Sbjct: 208 RVQLDSQPEEIDDFERKRMQLKIELHALEKDKDKASVARLVKVQKELDDLRDKLQPLTLR 267
Query: 463 YKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS 522
Y+ EK+ IDEIR+LKQKREEL+ AL+EAER++ L RAADLRYG IQ+VE+ + +LE S
Sbjct: 268 YQNEKKIIDEIRKLKQKREELMSALKEAERQHKLPRAADLRYGEIQQVESGLAKLE-ESS 326
Query: 523 DENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVA 571
ENLMLTETVGPD IAE+VS+WTGIPVT+L QN+KE+L LA +AV+AVA
Sbjct: 327 KENLMLTETVGPDNIAEIVSQWTGIPVTKLDQNDKEKLNSLADRLHQRVVGQDQAVDAVA 386
Query: 572 ESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQH 631
+++LRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVR+DMSEYME++
Sbjct: 387 DAILRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRLDMSEYMEKY 446
Query: 632 SVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTD 691
S++RLIGA PGY+G+EEGGQLTEAVR RPY VVLFDEVEKAH+S+FN LLQVLD+GRLTD
Sbjct: 447 SITRLIGASPGYIGYEEGGQLTEAVRNRPYCVVLFDEVEKAHVSIFNILLQVLDEGRLTD 506
Query: 692 GQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEI 751
QGRTVDF+N++IIMT+N+GA+HL+SG+ G+VTMQVA+D+V++ VRKHFRPELLNRLDEI
Sbjct: 507 SQGRTVDFKNSMIIMTANIGADHLISGLTGEVTMQVAQDRVMKAVRKHFRPELLNRLDEI 566
Query: 752 VVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRW 811
VVFDPLSHE LRKVA+LQMK+V IRLAE+G+AL VT+ ALD +L SY+P+YGARPIRRW
Sbjct: 567 VVFDPLSHENLRKVAQLQMKNVVIRLAEKGIALDVTNDALDYILEASYNPVYGARPIRRW 626
Query: 812 LEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVD 858
LEK VVT LS+M+VREEI ENS VYID S LVYR+ K GGFV+
Sbjct: 627 LEKNVVTVLSKMIVREEIAENSIVYIDVSAVKAGLVYRIGKTGGFVN 673
>gi|384253238|gb|EIE26713.1| heat shock protein [Coccomyxa subellipsoidea C-169]
Length = 886
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/863 (60%), Positives = 651/863 (75%), Gaps = 20/863 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P KFT KT E + A ELA H Q TP+H A+ L DP GI QAI E +
Sbjct: 1 MDPSKFTQKTIETLNNAQELAQENAHQQVTPVHAAIKLFEDPEGIAKQAILRNSNEETLR 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
S RV N+ + +LPS P PD+ S + KV++ A K + D+ + VD L+ LL++
Sbjct: 61 SILRVLNKKLVRLPSVDPPPDQAEFSNEMRKVLQSAVKRAKQNNDSFMGVDALLKALLDN 120
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDP 180
+ EAG + A+++S + +RG G V++ +GD F+AL YG DL +A +LDP
Sbjct: 121 KDVAAALSEAGTSKAQLESALSDVRGSGG-TVDTDTGDQKFEALLKYGTDLTAKAAQLDP 179
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGRDEEIRR+VRIL RRTKNNPVLIG+PGVGKTA+VEGLAQRIV+GDVP L +R+I+
Sbjct: 180 VIGRDEEIRRIVRILCRRTKNNPVLIGDPGVGKTAIVEGLAQRIVKGDVPEVLKGMRVIS 239
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LDMGALVAGAKYRGEFEERLKAVL EV++A+ VILFIDEIHLVLGAG+T+G+MDAANL
Sbjct: 240 LDMGALVAGAKYRGEFEERLKAVLAEVQQAQN-VILFIDEIHLVLGAGKTDGAMDAANLL 298
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARG+LRCIGATT+ EYR+++EKDAAFERRFQQV V EPSV DT+ ILRG+ +KY
Sbjct: 299 KPMLARGELRCIGATTVGEYRQHMEKDAAFERRFQQVQVEEPSVQDTIQILRGIADKYAS 358
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HGVRIQDRALV AA+LSARYI GR LPDKAIDLVDEACAN RVQLDS PE+ID ++R++
Sbjct: 359 FHGVRIQDRALVAAAELSARYIQGRFLPDKAIDLVDEACANSRVQLDSVPEDIDAMQRQK 418
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
+L++E AL KEKDKASK RL EVR+EL ++ +KL+PL+MRY EK +DE+R L++KR
Sbjct: 419 YRLQVEEKALSKEKDKASKERLEEVRRELGEIEEKLKPLVMRYAAEKRALDELRALQKKR 478
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAEV 540
+EL L EAE R DLA ADL+YGA+QEVE I + + Q ++ MLTE VGP+ IA+V
Sbjct: 479 DELKVKLAEAEHRMDLAMVADLKYGALQEVEDGI-RAKIAQLPKDPMLTEEVGPEDIAQV 537
Query: 541 VSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGRPQQPTG 589
VSRWTGIPV+RL +++ERL+ LAE AV+ VA +V+RSRAGL +
Sbjct: 538 VSRWTGIPVSRLQTSDRERLLHLAEQLHKRVVGQDQAVDVVASAVMRSRAGLSS-RSRGS 596
Query: 590 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 649
SFLFLGPTGVGKTELAKALAE LFDDE +++R+DMSEYME+H+V+RLIGAPPGY+GH+EG
Sbjct: 597 SFLFLGPTGVGKTELAKALAELLFDDEKMMIRLDMSEYMEKHTVARLIGAPPGYIGHDEG 656
Query: 650 GQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 709
GQLTEAVRR PYSVVL DEVEKAH V N LL VLDDGRLTD +GRTV F NTVII+TSN
Sbjct: 657 GQLTEAVRRHPYSVVLLDEVEKAHREVMNILLGVLDDGRLTDAKGRTVSFANTVIILTSN 716
Query: 710 LGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQ 769
LG++ LL G +A+D V+ VR+HFRPE LNRLD++V+FDPL H+QLRK+A +Q
Sbjct: 717 LGSDLLLEHGNGA----LAKDLVMGVVRQHFRPEFLNRLDDVVLFDPLGHDQLRKIAAIQ 772
Query: 770 MKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEI 829
+K++ RL + + L +TDAALD + +SYD +YGARP+RRWLE ++T+LSRM+V E+
Sbjct: 773 VKELNQRLIHKSITLELTDAALDYAVEQSYDHLYGARPLRRWLEHNILTDLSRMIVTGEL 832
Query: 830 DENSTVYIDASPKGDNLVYRVQK 852
E STV DA PK L Y V K
Sbjct: 833 TEGSTVIADADPKT-GLRYTVHK 854
>gi|4590326|gb|AAD26530.1|AF083327_1 101 kDa heat shock protein [Zea mays]
Length = 582
Score = 993 bits (2568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/572 (84%), Positives = 536/572 (93%), Gaps = 13/572 (2%)
Query: 329 AFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLP 388
AFERRFQQV+VAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYI GRHLP
Sbjct: 1 AFERRFQQVFVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYIMGRHLP 60
Query: 389 DKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKE 448
DKAIDLVDEACANVRVQLDSQPEEIDNLERKR+QLE+ELHALEKEKDKASKARL+EVRKE
Sbjct: 61 DKAIDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASKARLIEVRKE 120
Query: 449 LDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQ 508
LDDLRDKLQPL M+Y+KEKERIDEIR+LKQ+REEL F LQEAERR DLAR ADL+YGA+Q
Sbjct: 121 LDDLRDKLQPLTMKYRKEKERIDEIRKLKQRREELQFTLQEAERRMDLARVADLKYGALQ 180
Query: 509 EVEAAIGQLEGNQSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA---- 564
E++AAI +LE +++ ENLMLTETVGP+QIAEVVSRWTGIPVTRLGQN+KERL+GLA
Sbjct: 181 EIDAAISKLE-SETGENLMLTETVGPEQIAEVVSRWTGIPVTRLGQNDKERLVGLADRLH 239
Query: 565 -------EAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDEN 617
EAV+AVAE+VLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDEN
Sbjct: 240 QRVVGQTEAVSAVAEAVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDEN 299
Query: 618 LLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVF 677
LLVRIDMSEYMEQHSV+RLIGAPPGYVGHEEGGQLTE VRRRPYSV+LFDEVEKAH++VF
Sbjct: 300 LLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVF 359
Query: 678 NTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVR 737
NTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLL+GM+GK +M+VARD V+QEVR
Sbjct: 360 NTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLAGMVGKNSMKVARDLVMQEVR 419
Query: 738 KHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAE 797
+HFRPELLNRLDEIV+FDPLSHEQLRKVARLQMKDVA+RLAERG+ALAVTDAALDI+L+
Sbjct: 420 RHFRPELLNRLDEIVIFDPLSHEQLRKVARLQMKDVAVRLAERGIALAVTDAALDIILSL 479
Query: 798 SYDPIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFV 857
SYDP+YGARPIRRW+EK+VVT+LS+ML++EEIDEN TVYIDA+P D LVYRV ++GG V
Sbjct: 480 SYDPVYGARPIRRWIEKRVVTQLSKMLIQEEIDENCTVYIDAAPGKDELVYRVDRSGGLV 539
Query: 858 DAATGRKSDVLIQIP-NGPRTDPSQAVKKMKI 888
+A TG KSD+LIQ+P + R+D +QAVKKM+I
Sbjct: 540 NAETGMKSDILIQVPTSSTRSDAAQAVKKMRI 571
>gi|325179668|emb|CCA14066.1| heat shock protein 101 putative [Albugo laibachii Nc14]
Length = 888
Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/873 (57%), Positives = 646/873 (73%), Gaps = 41/873 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP FT KT E + A LA AGHAQ TP+HL AL D G+ + +
Sbjct: 1 MNPQDFTDKTQEYLQAAKSLAEDAGHAQLTPIHLVQALFDDADGLAKRLADRVDANKTGI 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E + +K +PSQTPAPD++ + + KV++ A +K DTHLAVD LIL L
Sbjct: 61 LQETA--RQLKLIPSQTPAPDQVSVDSGMTKVLKYADKRRKEMKDTHLAVDHLILALFTH 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAGKL 178
+Q +FK G +VK +EK+RG GR V S S + + AL YG++LV ++GK+
Sbjct: 119 TQCATVFKSNGFDERKVKEAIEKVRG--GRPVTSTSAEDMYDALTKYGQNLVSLAESGKI 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRV+RIL RRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP +L + +L
Sbjct: 177 DPVIGRDEEIRRVIRILCRRTKNNPVLIGEPGVGKTAVVEGLAQRIVFGDVPESL-NCQL 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
+LDMGAL+AGAKYRGEFEERLKAVLKEV++++G++ILFIDE+HL+LGAG+T G+MDAAN
Sbjct: 236 FSLDMGALIAGAKYRGEFEERLKAVLKEVKDSDGRIILFIDEMHLILGAGQTSGAMDAAN 295
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYR++VEKD AFERRFQQV V EP+V DTVSILRGLKE+Y
Sbjct: 296 LLKPMLARGELRCIGATTLDEYRQHVEKDKAFERRFQQVMVKEPTVTDTVSILRGLKERY 355
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA+L+ RYIT R +PDKAID++DEACA+VRVQLDSQPE ID LER
Sbjct: 356 ESHHGVQITDSALVTAAKLADRYITERFMPDKAIDIIDEACASVRVQLDSQPEAIDELER 415
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+++QL++E AL EKD+ SK RL +V+ EL+ + D+L PL+++++ EKER++E+RRLK
Sbjct: 416 RQLQLQVEATALANEKDEVSKERLKKVQAELNTISDQLHPLIVQHQAEKERVNEVRRLKD 475
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN----LMLTETVGP 534
K ++L +Q+AER DLA ADL+Y AI +++ I Q + N+ +E+ +++E V
Sbjct: 476 KLQQLQLKIQKAERNQDLATVADLKYYAIPDIQKRIAQAKINKKNEDENHPKLVSEVVRD 535
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
+QI ++VSRWTGIPV+RL + +RL +G EAVNAV E+V+RSRAGL R
Sbjct: 536 EQICQIVSRWTGIPVSRLTSSTSDRLLHLEERIHNRVVGQEEAVNAVCEAVVRSRAGLSR 595
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
+QPTGSFLFLGPTGVGKTELAKALA +LFD++ +VRIDMSEYME+HSV+RLIGAPPGY
Sbjct: 596 REQPTGSFLFLGPTGVGKTELAKALAFELFDNDKHMVRIDMSEYMEEHSVARLIGAPPGY 655
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VGHEEGGQLTE++RR+PY+VVL DE+EKAH V N LLQ+LDDGRLTD GRTVDF N V
Sbjct: 656 VGHEEGGQLTESIRRKPYNVVLLDEIEKAHPKVLNILLQLLDDGRLTDSHGRTVDFTNVV 715
Query: 704 IIMTSNLGAEHLLS----------------GMMG-KVTMQVARDQ--VLQEVRKHFRPEL 744
+IMTSN+GAEHL++ G G +VT R + VLQ++R RPEL
Sbjct: 716 VIMTSNIGAEHLMALGSIDVSPRHSKKARIGSEGDEVTPAFVRQRELVLQQLRATIRPEL 775
Query: 745 LNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYG 804
LNRLD+IVVF PL QLRK+ LQ + VA RL E +++ V+ +ALD++L E+YDP YG
Sbjct: 776 LNRLDDIVVFSPLGRAQLRKIVSLQFESVAKRLKESHISMRVSVSALDVILEEAYDPQYG 835
Query: 805 ARPIRRWLEKKVVTELSRMLVREEIDENSTVYI 837
ARP++R++EK VVT LS++++ + S V +
Sbjct: 836 ARPLKRYIEKHVVTGLSKLILMGRLPAKSHVEV 868
>gi|348680558|gb|EGZ20374.1| hypothetical protein PHYSODRAFT_558773 [Phytophthora sojae]
Length = 894
Score = 984 bits (2543), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/890 (58%), Positives = 657/890 (73%), Gaps = 47/890 (5%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP +FT KTNE + A ++A GH+Q TPLH+A AL D +G + + G N A
Sbjct: 1 MNPAEFTDKTNEYLRNAQDMAEELGHSQLTPLHVAHALFEDRNGTAKRVADLVHG-NVAG 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ V Q +KKLPSQTPAPD I A + L+K+++ A +K DTHLA D L++ L +
Sbjct: 60 FQQDVMLQ-IKKLPSQTPAPDTIGADSALVKMLKYAHKMRKDMKDTHLAADHLLVALYHN 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAGKL 178
SQ+ L K + +VK V K+RG GR V SAS + + AL YG++L+E +AGK+
Sbjct: 119 SQVASLLKANQMDENQVKDAVAKMRG--GRPVTSASAEENYDALNKYGQNLIELAEAGKI 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIV GDVP +L + +L
Sbjct: 177 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLARRIVVGDVPDSL-NCKL 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAKYRGEFEERLKAVLKEV++++GKVILFIDE+HL+LGAG+T G+MDAAN
Sbjct: 236 ISLDMGALIAGAKYRGEFEERLKAVLKEVKDSDGKVILFIDEMHLILGAGQTSGAMDAAN 295
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYR++VEKD AFERRFQQV V EPSVPDTVSILRGLKE+Y
Sbjct: 296 LLKPMLARGELRCIGATTLDEYRQHVEKDKAFERRFQQVMVKEPSVPDTVSILRGLKERY 355
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+IQD ALV AA+L+ RYI R +PDKAID++DEACANVRVQLDSQPE ID LER
Sbjct: 356 ESHHGVQIQDAALVAAAKLADRYIKERFMPDKAIDIIDEACANVRVQLDSQPEVIDELER 415
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+ +QL++E AL KEKD SK RL +V++EL+ ++D+L PL +R++ EK R++EIR+L++
Sbjct: 416 RHLQLQVEATALGKEKDAMSKQRLKKVQEELNKIQDELGPLKLRHESEKARVNEIRQLRE 475
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL------MLTETV 532
K + L ++AER DL A+DL+Y AI +V I + E + E+ M+ E V
Sbjct: 476 KLQHLQLKAEQAERNQDLQTASDLQYYAIPDVRRRIAEAEEAKKREDADETQHKMVEEVV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
DQI EVV+RWTGIPV+RL + +RL +G EAV AV ++VLRSRAGL
Sbjct: 536 REDQICEVVARWTGIPVSRLTSSMGDRLMHLEERIHQRVVGQEEAVKAVCDAVLRSRAGL 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
R QPTGSFLFLGPTGVGKTELAKALA +LFDD+ +VRIDMSEYME+H+VSRLIG+PP
Sbjct: 596 ARSGQPTGSFLFLGPTGVGKTELAKALAYELFDDDKHMVRIDMSEYMEEHTVSRLIGSPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GY+GHEEGGQLTEAVRR PY+V+L DE+EKAH V N LLQVLDDGRLTD GRTVDF N
Sbjct: 656 GYIGHEEGGQLTEAVRRNPYNVILMDEIEKAHPKVLNILLQVLDDGRLTDSHGRTVDFAN 715
Query: 702 TVIIMTSNLGAEHLL---------------------SGMMGKVTMQVARDQVLQEVRKHF 740
TV+IMTSN+GAEHLL S K R+ VLQ++R
Sbjct: 716 TVVIMTSNIGAEHLLFENDPLMRASKKIKTESDFVKSENDTKKEFAKQRELVLQQLRHTV 775
Query: 741 RPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYD 800
RPELLNRLD+IVVF+PL ++LR++ LQ + V RL E +++ VT AALD++L ESY+
Sbjct: 776 RPELLNRLDDIVVFEPLGRKELRQIVMLQFESVINRLKESQISVNVTTAALDVILDESYE 835
Query: 801 PIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRV 850
P YGARPI+R++EK +VT+LS++++ ++ ++ +++ + G L + V
Sbjct: 836 PQYGARPIKRYIEKHIVTDLSKLIISGQL--HAKTHVEITETGGKLSFNV 883
>gi|326436955|gb|EGD82525.1| heat shock protein [Salpingoeca sp. ATCC 50818]
Length = 892
Score = 978 bits (2527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/881 (56%), Positives = 643/881 (72%), Gaps = 36/881 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE-NAA 59
+NP+++T K E A +A + +A P+H AVAL D G+ + + +G +A
Sbjct: 3 LNPNEWTEKVQEMYLEAKNVAINNKNAYMDPIHFAVALFEDEGGLPQRVVQKSGASLDAV 62
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ A R +K +P Q PAP ++ S ++ ++ AQ QK + + HLA+D L+L L++
Sbjct: 63 EGAMRSL---LKAIPQQDPAPVDVSTSHKALRFLQNAQKKQKKNDEAHLAIDHLLLALVQ 119
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ I G+A R + V+K++G + + + ++T+ AL YG DLV++A GK
Sbjct: 120 EKDILQALAGCGLAKDRFEEIVKKIKGTT--RANTKTAESTYDALGKYGVDLVQRAADGK 177
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRV++IL+RRTKNNPVL+G PG GKTA+VEGLAQRI+ GDVP L R
Sbjct: 178 LDPVIGRDEEIRRVIQILARRTKNNPVLVGPPGTGKTAIVEGLAQRILNGDVPETLK-AR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L++LDMGAL+AGAKYRGEFEERLK+VL EV++AEG +ILF+DEIH VLGAG+TEGSMDAA
Sbjct: 237 LVSLDMGALIAGAKYRGEFEERLKSVLDEVKQAEGSIILFVDEIHTVLGAGKTEGSMDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KPMLARG+LR IGATTL+EYRK+VEKDAAFERRFQ V+V+EPSVPDTVSILRGLKE+
Sbjct: 297 NLLKPMLARGELRMIGATTLDEYRKHVEKDAAFERRFQMVHVSEPSVPDTVSILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRIQD ALV AAQL+ RYIT R LPDKAIDLVDEACA RVQLDS+PEEID LE
Sbjct: 357 YEAHHGVRIQDAALVTAAQLADRYITQRFLPDKAIDLVDEACAKTRVQLDSRPEEIDALE 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+++QLE+E AL KEKDK SK RL EV+K+L D+ ++L PL M+++ E+ R+DE+R L+
Sbjct: 417 RRKLQLEVEATALGKEKDKMSKQRLKEVKKQLADIEEQLGPLKMKFEMERGRVDEMRELQ 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL------------EGNQSDEN 525
+K + L +Q AER DL+ AADL+Y AI + E + QL + SDE+
Sbjct: 477 EKLDNLRNKVQRAERAGDLSTAADLKYYAIPDCEKRLKQLIEEQEKRQQEQQSMDVSDED 536
Query: 526 L-MLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAES 573
ML+E VGPDQ+ E+V+RWTGIPV +L Q+++ERL+ L E AV AV E+
Sbjct: 537 KPMLSEEVGPDQVTEIVARWTGIPVNKLSQSQRERLLTLEEKIEQRVVGQTAAVKAVCEA 596
Query: 574 VLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV 633
VLRSRAGL RP QP GSFLFLGPTGVGKTELAKALA +LFDD+ +VR+DMSEYME HSV
Sbjct: 597 VLRSRAGLSRPNQPVGSFLFLGPTGVGKTELAKALAMELFDDDKHIVRVDMSEYMESHSV 656
Query: 634 SRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQ 693
+RLIG+PPGYVG+EEGGQLTEAVRRRPY+++L DEVEKAH V N LLQ+LDDG LTDG
Sbjct: 657 ARLIGSPPGYVGYEEGGQLTEAVRRRPYNLILLDEVEKAHKDVLNVLLQLLDDGILTDGM 716
Query: 694 GRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQV---ARDQVLQEVRKHFRPELLNRLDE 750
GRTVDF NTV+++TSN+GA LLSG + T + R QV+ EV+ +FRPE LNRLD+
Sbjct: 717 GRTVDFTNTVVVLTSNIGAPILLSGKVDPETGDLDENTRTQVMHEVQSYFRPEFLNRLDD 776
Query: 751 IVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRR 810
+++F PL LR + R ++ + RLA+R + L TDAA D++L S+ P YGARP+RR
Sbjct: 777 VIMFKPLQKHALRTICRNMVEQINERLADRDITLDCTDAACDVILLNSFHPQYGARPVRR 836
Query: 811 WLEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
++EK+VVT +S+ ++ ++ S V ID + L Y VQ
Sbjct: 837 YIEKQVVTAMSKKMLSNQVPNGSRVTIDGDKQRQELTYSVQ 877
>gi|167534332|ref|XP_001748844.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772806|gb|EDQ86454.1| predicted protein [Monosiga brevicollis MX1]
Length = 889
Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/883 (57%), Positives = 658/883 (74%), Gaps = 36/883 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+NP++FT K N+ + A A GH+Q P H+AV L DP G+ + + AG A Q
Sbjct: 3 INPNEFTDKVNKTLFEAQNFAIQEGHSQVEPAHVAVILFEDPEGMAKRVVQRAGA--ALQ 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ ++++P Q PAP E S+ ++++ A QK + + HLAVD L+ L++D
Sbjct: 61 PVQAALRSLLQRMPRQEPAPLEASLSSDTRRLLQSAAKLQKKNNEAHLAVDHLLGALVQD 120
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
QI E+G+A + +++++G +S S + + AL YG DLV+QA GKL
Sbjct: 121 KQILAKLAESGLAKNHFEETLKRVKGTT--TADSKSAEENYDALSKYGVDLVQQAADGKL 178
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPV+GRDEEIRRV++IL+RR K+NP L+G PGVGK+A+VEGLAQRI+ GDVP L +L
Sbjct: 179 DPVLGRDEEIRRVIQILARRIKSNPCLVGPPGVGKSAIVEGLAQRIMLGDVPETLKG-KL 237
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAKYRGEFEERLKAVL+E++++EG++ILF+DE+H VLGAG+TEGSMDAAN
Sbjct: 238 ISLDMGALIAGAKYRGEFEERLKAVLEEIKQSEGRIILFVDEVHNVLGAGKTEGSMDAAN 297
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KP+LARG+LR IGATT +EYRKYVEKD+AFERRFQ V V EPSVPDTVSILRGLKE+Y
Sbjct: 298 LLKPLLARGELRMIGATTEDEYRKYVEKDSAFERRFQVVQVREPSVPDTVSILRGLKERY 357
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AAQLS RYI GR LPDKAIDL+DEACAN RVQLDS+PEEID LER
Sbjct: 358 EAHHGVRIADAALVAAAQLSHRYIQGRFLPDKAIDLIDEACANARVQLDSRPEEIDQLER 417
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+R+QL++E ALEKEKD+ASK RL +VRKEL ++ ++LQPL+M+++ E+ R+DE+R L++
Sbjct: 418 RRLQLQVEATALEKEKDQASKLRLKDVRKELANIEEQLQPLLMKFEMERGRVDELRDLQE 477
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE------------GNQSDENL 526
K + L Q AER+ DLA AADL+Y AI + E I QL ++ ++
Sbjct: 478 KLDSLRSKAQRAERQGDLATAADLKYYAIPDCERRIQQLTLEDEERSAQRSGMDEQEDAP 537
Query: 527 MLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVL 575
ML+E VGP+QI ++++RWTGIPVT+L Q+++ERL+ LAE AV+AVAE+VL
Sbjct: 538 MLSEEVGPEQITDIIARWTGIPVTKLNQSQRERLLALAERIKSRVIGQDHAVDAVAEAVL 597
Query: 576 RSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSR 635
RSRAGL RP QPTGSFLFLG TGVGKTELAKALA +LFDD+ +VRIDMSEYME H+VSR
Sbjct: 598 RSRAGLSRPSQPTGSFLFLGTTGVGKTELAKALAAELFDDDKHIVRIDMSEYMESHAVSR 657
Query: 636 LIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGR 695
LIG+PPGYVG+E+GGQLTEAVRRRPY+VVLFDEVEKAH V N LLQVLDDG LTDGQGR
Sbjct: 658 LIGSPPGYVGYEQGGQLTEAVRRRPYNVVLFDEVEKAHPQVLNVLLQVLDDGVLTDGQGR 717
Query: 696 TVDFRNTVIIMTSNLGAEHLLSG--MMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVV 753
VDF NTVI++TSN+GA LL+ + G + + +V ++V++HFRPE LNRLDE+V+
Sbjct: 718 HVDFTNTVIVLTSNIGAHDLLNADVVNGAIDPET-EAKVRRQVQQHFRPEFLNRLDEVVM 776
Query: 754 FDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLE 813
F PL LRK+ R + + RL +R +AL V+D A D+VL E+Y+P YGARP+RR++E
Sbjct: 777 FKPLGQRDLRKICRNMVDLINQRLVDRDIALLVSDDACDLVLDEAYNPAYGARPVRRYVE 836
Query: 814 KKVVTELSRMLVREEIDENSTVYIDASPKGD---NLVYRVQKN 853
K +VTE+SR+++ E+ +STV+ID + + D +L Y+V +
Sbjct: 837 KHMVTEISRLVLSGELVNHSTVHIDTTKRPDGGRDLSYQVHHS 879
>gi|301097499|ref|XP_002897844.1| heat shock protein 101 [Phytophthora infestans T30-4]
gi|262106592|gb|EEY64644.1| heat shock protein 101 [Phytophthora infestans T30-4]
Length = 895
Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/880 (57%), Positives = 656/880 (74%), Gaps = 45/880 (5%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP +FT KTNE + A ++A GH+Q TPLH+A AL D +G + G N A
Sbjct: 1 MNPAEFTDKTNEYLRNAQDMAEELGHSQLTPLHVAYALFDDHNGTAKRVAELVHG-NVAG 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ V Q +KKLP QTPAP+ + A + L+K+++ A +K DTHLA D L++ L +
Sbjct: 60 FKQDVMLQ-LKKLPKQTPAPESVGADSALMKMLKYAHKMRKDMKDTHLAADHLVVALYNN 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAGKL 178
SQ+ L K + +VK V+K+RG GR V SA+ + + AL YG++L+E +AGK+
Sbjct: 119 SQVAGLLKSNQMDENQVKDAVQKIRG--GRPVTSAAAEENYDALNKYGQNLIELAEAGKI 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRV+RILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIV GDVP +L + +L
Sbjct: 177 DPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAIVEGLARRIVVGDVPDSL-NCKL 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
++LDMGAL+AGAKYRGEFEERLKAVLKEV++++GK+ILFIDE+HL+LGAG+T G+MDAAN
Sbjct: 236 VSLDMGALIAGAKYRGEFEERLKAVLKEVKDSDGKIILFIDEMHLILGAGQTSGAMDAAN 295
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYR++VEKD AFERRFQQV V EPSVPDTVSILRGLKE+Y
Sbjct: 296 LLKPMLARGELRCIGATTLDEYREHVEKDKAFERRFQQVMVKEPSVPDTVSILRGLKERY 355
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA+L+ RYI R +PDKAID+VDEACANVRVQLDSQPE ID LER
Sbjct: 356 ESHHGVQIMDAALVAAAKLADRYIKERFMPDKAIDIVDEACANVRVQLDSQPEVIDELER 415
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+++QL++E AL KEKD SK RL +V++EL++++D+L PL++R++ EK R++EIR+L++
Sbjct: 416 RQLQLQVEATALAKEKDAMSKQRLKKVQEELNEIQDELSPLILRHEAEKARVNEIRQLRE 475
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDEN----LMLTETV 532
K + L ++AER DL A+DL+Y AI +V+ I E + DE+ M+ E V
Sbjct: 476 KLQHLQLKAEQAERNQDLQTASDLQYYAIPDVKRRIAAAEEVKKREDEDEMQHKMVEEVV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
DQI EVV+RWTGIPV+RL + +RL +G EAV AV ++VLRSRAGL
Sbjct: 536 REDQICEVVARWTGIPVSRLTSSMGDRLMHLDERLHKRVVGQDEAVKAVCDAVLRSRAGL 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
R QPTGSFLFLGPTGVGKTELAKALA +LFDD+ +VRIDMSEYME+H+VSRLIGAPP
Sbjct: 596 ARSGQPTGSFLFLGPTGVGKTELAKALAYELFDDDKHMVRIDMSEYMEEHTVSRLIGAPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
G+VG++E GQLTEAVRR PY+VVL DE+EKAH V N LLQVLDDGRLTD GRTVDF N
Sbjct: 656 GFVGYQESGQLTEAVRRNPYNVVLLDEIEKAHPKVLNILLQVLDDGRLTDSHGRTVDFAN 715
Query: 702 TVIIMTSNLGAEHLL--SGMMGKVTMQVA-------------------RDQVLQEVRKHF 740
TVIIMTSN+GAEHLL + + + + ++ R+ VLQ++R+
Sbjct: 716 TVIIMTSNIGAEHLLFENSLSPRASKKIKTENDFVNTENEAKRVFANQRELVLQQLRRTV 775
Query: 741 RPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYD 800
RPELLNRLD+IVVF+PL +LR++ LQ + V RL E +++ VT ALD++L ESY+
Sbjct: 776 RPELLNRLDDIVVFEPLGRNELRQIVMLQFESVINRLKESQISVNVTTPALDVILDESYE 835
Query: 801 PIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYIDAS 840
P YGARPI+R++EK +VT+LS++++ ++ S V I A+
Sbjct: 836 PQYGARPIKRYIEKHIVTDLSKLIISGQLHAKSHVKIAAN 875
>gi|302840379|ref|XP_002951745.1| hypothetical protein VOLCADRAFT_61636 [Volvox carteri f.
nagariensis]
gi|300262993|gb|EFJ47196.1| hypothetical protein VOLCADRAFT_61636 [Volvox carteri f.
nagariensis]
Length = 928
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/871 (59%), Positives = 641/871 (73%), Gaps = 32/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+P K T K NE ++ + LA HA TPLHLAV L +P GI A + GG+ A +
Sbjct: 3 FDPKKATEKVNEIVSSSIHLAQEEQHATLTPLHLAVVLFEEPQGIARSAASRVGGDEAWR 62
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
S RV + + KLP PAPD + L K++ A AQK D +L VD L+ ++
Sbjct: 63 SCIRVLRRRLAKLPKVQPAPDSVSPGRDLTKMLSTAAKAQKDRNDAYLGVDTLLSAVIAA 122
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGR-KVESASGDTTFQALKTYGRDLVEQAGKLD 179
+ + EAGV+ A++++ + ++R G V+S + D F AL YG DL A + D
Sbjct: 123 QDVSEALSEAGVSKAQLETALAEVRQASGNGPVDSQTADANFDALSKYGTDLTANAARAD 182
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRVVR+L RRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L VRLI
Sbjct: 183 PVIGRDDEIRRVVRVLCRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPETLRGVRLI 242
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAAN 298
+LDMG+LVAGAKYRGEFEERLKAVL EV++ +GKV+LFIDE+HLVLGAG+ + +MDAAN
Sbjct: 243 SLDMGSLVAGAKYRGEFEERLKAVLTEVQQQQGKVVLFIDELHLVLGAGKAGDSAMDAAN 302
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL EYR+++EKDAAFERRFQQV V EPSV DTV+ILRG+KE+Y
Sbjct: 303 LLKPMLARGELRCIGATTLAEYREHIEKDAAFERRFQQVLVKEPSVADTVAILRGIKERY 362
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV I DRALVVAA+LS RYIT R LPDKAIDLVDEACAN+RVQLDS+PE++D LER
Sbjct: 363 ESHHGVHITDRALVVAAELSDRYITARFLPDKAIDLVDEACANMRVQLDSKPEQLDALER 422
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+R++L++E AL KEKD+ SK R EV KEL L DKL+PL++RY++E+ R++E+RRL Q
Sbjct: 423 QRIRLQVEAAALAKEKDELSKVRAAEVAKELAALEDKLRPLLLRYQQERSRLEELRRLVQ 482
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
KR+E+L +Q AE+ +LAR ADLRYGA+ EVE I L Q + ML+E VGP++IA
Sbjct: 483 KRDEILVNIQLAEQHNNLARIADLRYGALPEVEERIKALRVAQP-ADAMLSEEVGPEEIA 541
Query: 539 EVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQP 587
VVSRWTGIPV+RL Q+E+E R++G +AV AVA++VLRSRAGL +
Sbjct: 542 TVVSRWTGIPVSRLKQSEREKLLELRSELQKRVVGQDDAVAAVADAVLRSRAGLASRNRG 601
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
+ SFLFLGPTGVGKTELAKALA+ LFDDE +++RIDM EYME+HSVSRL+GAPPGYVGHE
Sbjct: 602 S-SFLFLGPTGVGKTELAKALAQLLFDDEKMMIRIDMGEYMERHSVSRLVGAPPGYVGHE 660
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTEAVRRRPYSVVLFDEVEKAH VFN LL +LDDGR+TD +GRTV+F NTVII+T
Sbjct: 661 EGGQLTEAVRRRPYSVVLFDEVEKAHAEVFNILLSILDDGRVTDSKGRTVNFANTVIILT 720
Query: 708 SNLGAEHLL-----------------SGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDE 750
SNLG+E LL G+ + A+ V+ VR+ FRPE LNRLD+
Sbjct: 721 SNLGSEALLQAAQKAQHQVQQPRPQGGGLPANEPYREAKQMVMAAVRRLFRPEFLNRLDD 780
Query: 751 IVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRR 810
IVVF+PL EQ+ +A L K++A RL+ + L TDAAL + ++Y+P YGARP+RR
Sbjct: 781 IVVFEPLRPEQMVHIAGLLGKELAGRLSPHNIGLTFTDAALSYAVQQAYNPEYGARPLRR 840
Query: 811 WLEKKVVTELSRMLVREEIDENSTVYIDASP 841
W+E VVTELSRM+V + +NS V +D +P
Sbjct: 841 WMEHTVVTELSRMIVSGRLLDNSDVVVDTAP 871
>gi|300123183|emb|CBK24456.2| unnamed protein product [Blastocystis hominis]
Length = 889
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/892 (55%), Positives = 648/892 (72%), Gaps = 45/892 (5%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT+ E + A +LA + + + + +HLAV++L DP G AG + + ++
Sbjct: 7 KFTNYVTENLIAAQDLAKANKNPEISNVHLAVSMLKDPKGFPYLVCQKAGVD--VEVLKK 64
Query: 65 VFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG 124
++ +KK+P+Q P PDEI S +L K++R AQ + D+ +A D ++ + DS +
Sbjct: 65 KLDEQLKKIPTQDPLPDEIYFSASLSKILRLAQENATSQKDSRVAQDHVLAAMFNDSTMK 124
Query: 125 DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVI 182
LF+ G+ ++ +++ RG + +S + + + AL YG DLV+QA GK+DPVI
Sbjct: 125 SLFESVGLTKKKLDDAIKEKRG--SAQADSDAPEGAYDALNQYGVDLVKQAEEGKIDPVI 182
Query: 183 GRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALD 242
GRDEEIRRV+RIL RRTKNNPVLIGEPGVGKTA+VEGLA RIV+GDVP L VRLI+LD
Sbjct: 183 GRDEEIRRVIRILCRRTKNNPVLIGEPGVGKTAIVEGLANRIVQGDVPETLR-VRLISLD 241
Query: 243 MGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKP 302
+GAL+AGAKYRGEFEERLKAV+ EV+++EGK+ILFIDE+HL+LGAG+T+G+MDAANL KP
Sbjct: 242 LGALIAGAKYRGEFEERLKAVMNEVKQSEGKIILFIDEMHLLLGAGKTDGAMDAANLLKP 301
Query: 303 MLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHH 362
ML+RG+LR IGATTLEEY+KYVEKDAAFERRFQQVYV EPSV DTVSILRGLK++YE +H
Sbjct: 302 MLSRGELRVIGATTLEEYKKYVEKDAAFERRFQQVYVGEPSVEDTVSILRGLKDRYERYH 361
Query: 363 GVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQ 422
GVRI D ALV+AA+LS RYI R LPDKAIDLVDEACAN+RVQLDSQPEEID LERK++Q
Sbjct: 362 GVRIDDSALVLAAKLSHRYIQDRFLPDKAIDLVDEACANIRVQLDSQPEEIDRLERKQLQ 421
Query: 423 LEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREE 482
LEIE A+E EKD+ASKARL +V++EL ++R++L+PLMMR++KEKE +DE+RRLK K E
Sbjct: 422 LEIEQTAMENEKDEASKARLEKVKEELQEVREQLKPLMMRHEKEKEGMDELRRLKNKVAE 481
Query: 483 LLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG--NQSDENLMLTETVGPDQIAEV 540
++ A+R +D ARA+DL+Y + ++E AI + E + ++ ML E V + I V
Sbjct: 482 TQNKIEAAKRVHDTARASDLQYYVLPDLEEAIKRQEEEIEKQKDSRMLKEEVTANDICHV 541
Query: 541 VSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSRAGLGRPQQPTG 589
VS WTGIP+ RL ++++RLI G + A+ AV+ ++LRSRAGL R +PTG
Sbjct: 542 VSNWTGIPMDRLSTSDRDRLIQLPQRLSEKVVGQSAAIEAVSNAILRSRAGLSREGKPTG 601
Query: 590 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 649
FLFLGPTGVGKTELAK LA +LF+DE +VRIDMSEYME+HSVSRL+GAPPGYVG+EEG
Sbjct: 602 CFLFLGPTGVGKTELAKKLALELFNDEKHIVRIDMSEYMEKHSVSRLVGAPPGYVGYEEG 661
Query: 650 GQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 709
G+LTEAVRRRPY+V+L DEVEKAH V+N LQV DDGRLTD QGRTVDF NTVIIMTSN
Sbjct: 662 GELTEAVRRRPYNVILLDEVEKAHPDVWNLFLQVFDDGRLTDKQGRTVDFSNTVIIMTSN 721
Query: 710 LGAEHLLSGMMGKVTMQVA---------------------RDQVLQEVRKHFRPELLNRL 748
LGA+ LL + + + +V+Q +R HFRPE LNRL
Sbjct: 722 LGADILLQDRENTMNAENGGRKRGSSSDSDSDLKRMCGNQKQRVMQVIRSHFRPEFLNRL 781
Query: 749 DEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPI 808
DEI++F+PL +EQ++KV +LQ+ ++ RL E+ +AL D+AL+ ++ ++YDP+YGARP+
Sbjct: 782 DEIIMFNPLGYEQMKKVMKLQIDELNNRLKEQNIALEADDSALEKIMKDAYDPLYGARPL 841
Query: 809 RRWLEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAA 860
+R++E+ +VT+LS+ L+ I + A N V+ QK + A
Sbjct: 842 KRYIERAIVTDLSKRLIAGTIMPGFVYSLSAK----NGVFEYQKKRAYATTA 889
>gi|328771926|gb|EGF81965.1| hypothetical protein BATDEDRAFT_31536 [Batrachochytrium
dendrobatidis JAM81]
Length = 898
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/868 (57%), Positives = 637/868 (73%), Gaps = 36/868 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
++P+ FT KT I+ A+ELA H + +P+H+AVAL D SG+F + AG + A
Sbjct: 2 LSPENFTDKTTSVISKANELAAEYSHIEISPVHIAVALFDDESGLFRSILQKAGADPAM- 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
ER + + SQTPAP +I T +IR A +K D+HL++D LIL L E+
Sbjct: 61 -CERKLKSILVRQSSQTPAPTQISFHHTTAALIRTADEIRKKQKDSHLSIDHLILALCEN 119
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+I E G + + + ++RG R ++S S D+T++AL Y DLV A GKL
Sbjct: 120 KEIMAALAEGGATKKAIDAAITQIRG--SRHIDSKSADSTYEALSKYAIDLVSLAEQGKL 177
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DP IGRD+EIRRV+R+L+RRTKNNP+L+GEPGVGKTA+VEGLAQRIVR DVP +L RL
Sbjct: 178 DPCIGRDDEIRRVIRVLARRTKNNPILVGEPGVGKTAIVEGLAQRIVRKDVPMSL-QARL 236
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
+LDMGAL+AGAKYRGEFEERLKAVLKEV+++ +ILF+DEIH VLGAG+++G+MDAAN
Sbjct: 237 YSLDMGALIAGAKYRGEFEERLKAVLKEVKDSNSNIILFVDEIHTVLGAGKSDGAMDAAN 296
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LR IGATTL EY+K+VEKDAAFERRFQQV V EPSV TVSILRG++EK+
Sbjct: 297 LMKPMLARGELRLIGATTLGEYQKHVEKDAAFERRFQQVSVGEPSVEATVSILRGIREKW 356
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E +HGVRI D ALV AA L+ RYIT R LPDKAIDLVDEACA++RVQLDSQPE ID L+R
Sbjct: 357 EVYHGVRIADAALVTAATLADRYITTRFLPDKAIDLVDEACASIRVQLDSQPEAIDILDR 416
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+ +QLEIE ALEKEKD AS RL +VR+E+ ++++L+PL MRY EK RIDE+R L Q
Sbjct: 417 RLLQLEIEATALEKEKDGASAQRLAKVRQEISHIQEQLKPLKMRYDSEKGRIDELRHLNQ 476
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG-----------QLEGNQSDENLM 527
K +EL + +AERRYDLA AADL+YGA+ +++ I Q+E + + E+ +
Sbjct: 477 KLDELKNKIADAERRYDLALAADLKYGAVPDLQKRIATIEEQMKAERTQIESSGAVESKL 536
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLR 576
++E VGPD I EVVSRWTGIPVTRL +++ +RLI LA+ AV AVA++VLR
Sbjct: 537 VSEHVGPDNIMEVVSRWTGIPVTRLNKSQVDRLIHLADALHKRVVGQDKAVKAVADAVLR 596
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENL-LVRIDMSEYMEQHSVSR 635
SRAGL GSFLFLGPTGVGKTELAK LA +LFDD+ L+RIDMSEYMEQHSV+R
Sbjct: 597 SRAGLS-GSGTIGSFLFLGPTGVGKTELAKTLAHELFDDDKKGLLRIDMSEYMEQHSVAR 655
Query: 636 LIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGR 695
LIGAPPGYVG +EGGQLTE+VRR PY V+LFDE+EKAH V N LLQVLDDGRLTDG+GR
Sbjct: 656 LIGAPPGYVGFDEGGQLTESVRRHPYCVILFDEIEKAHTQVLNILLQVLDDGRLTDGKGR 715
Query: 696 TVDFRNTVIIMTSNLGAEHL----LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEI 751
TVDF NTVIIMTSNLG+++L + T R+ V+ EVR F+PELLNR+ +I
Sbjct: 716 TVDFTNTVIIMTSNLGSQYLANTDTNNKSNPSTNPAVREMVMTEVRSKFKPELLNRITDI 775
Query: 752 VVFDPLSHEQLRKVARLQMKDVAIRL-AERGVALAVTDAALDIVLAESYDPIYGARPIRR 810
V+FDPL+ +LRK+ R+ + D+ RL + + L V+D A D+VL +YDP+YGARP+RR
Sbjct: 776 VLFDPLAKVELRKIVRILLADIDKRLFSSHQIRLHVSDEAADVVLDRAYDPVYGARPLRR 835
Query: 811 WLEKKVVTELSRMLVREEIDENSTVYID 838
+ E+ +VTE+S++L+ ++ + S+V ID
Sbjct: 836 YFERSLVTEISKLLISGKLPDGSSVSID 863
>gi|159481478|ref|XP_001698806.1| ClpB chaperone, Hsp100 family [Chlamydomonas reinhardtii]
gi|158273517|gb|EDO99306.1| ClpB chaperone, Hsp100 family [Chlamydomonas reinhardtii]
Length = 925
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/870 (58%), Positives = 633/870 (72%), Gaps = 26/870 (2%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
K T K N + A LA HA TP HLAV L +P G+ A GE +SA R
Sbjct: 7 KATEKVNNVLGEAINLAKEDKHAALTPTHLAVVLFEEPHGLAKVAATKVAGEEVWRSAIR 66
Query: 65 VFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG 124
V + + KLP PAP+ + L KV+ A QK GD L D L+ ++ +++
Sbjct: 67 VLRKRLTKLPKVDPAPESVSPGRELSKVLTAAAKLQKDRGDAFLGTDTLLTAVINAAEVS 126
Query: 125 DLFKEAGVAVARVKSEVEKLR-GKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDPVIG 183
+ EAG++ A++++ + ++R G + S + D F AL YG DL A + DPVIG
Sbjct: 127 EALGEAGISKAQLETALSEVRQAAGGGPINSETADANFDALAKYGTDLTANAARADPVIG 186
Query: 184 RDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDM 243
RD+EIRRVVR+L RRTKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP L VRLI+LDM
Sbjct: 187 RDDEIRRVVRVLCRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKNDVPETLQGVRLISLDM 246
Query: 244 GALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFKP 302
G+LVAGAKYRGEFEERLKAVL EV + +GKV+LFIDE+HLVLGAG++ +G+MDAANL KP
Sbjct: 247 GSLVAGAKYRGEFEERLKAVLNEVAQQQGKVVLFIDELHLVLGAGKSGDGAMDAANLLKP 306
Query: 303 MLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHH 362
MLARG+LRCIGATTL EYR+++EKDAAFERRFQQV V EPSVPDT++ILRG+K++YE HH
Sbjct: 307 MLARGELRCIGATTLGEYREHIEKDAAFERRFQQVLVKEPSVPDTIAILRGIKDRYETHH 366
Query: 363 GVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQ 422
GV I DRALVVAA+LS RYIT R LPDKAIDLVDEACAN+RVQLDS+PE++D LER+R +
Sbjct: 367 GVHITDRALVVAAELSDRYITTRFLPDKAIDLVDEACANMRVQLDSKPEQLDALERQRQR 426
Query: 423 LEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREE 482
L++E AL KEKD SKAR EV KEL L + L+PL M+Y +EK R++E+RRL QKR+E
Sbjct: 427 LQVEAAALAKEKDALSKARAKEVGKELAALEEALRPLQMKYAQEKARLEELRRLGQKRDE 486
Query: 483 LLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAEVVS 542
+L +Q AE+ +LAR ADLRYGA+ +VE I Q+ + + ML+E VG ++IA VVS
Sbjct: 487 ILVNIQIAEQHGNLARIADLRYGALPDVEDRIKQVRA-AAPSDAMLSEEVGTEEIAVVVS 545
Query: 543 RWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRPQQPTGSF 591
RWTGIPV RL Q E+ +R++G AV AVA++VLRSRAGL + + SF
Sbjct: 546 RWTGIPVNRLKQTERDKLLSLRSELQQRVVGQDAAVAAVADAVLRSRAGLAARGRGS-SF 604
Query: 592 LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQ 651
LFLGPTGVGKTELAKALA+ LFDDE +++RIDM EYME+HSVSRLIGAPPGYVGHE+GGQ
Sbjct: 605 LFLGPTGVGKTELAKALAQLLFDDEKMMIRIDMGEYMEKHSVSRLIGAPPGYVGHEQGGQ 664
Query: 652 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLG 711
LTEAVRRRPYSVVLFDEVEKAH VFN LL +LDDGR+TD +GRTV+F NTVII+TSNLG
Sbjct: 665 LTEAVRRRPYSVVLFDEVEKAHAEVFNVLLSILDDGRVTDSKGRTVNFANTVIILTSNLG 724
Query: 712 AEHLL-----------SGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
AE LL G+ + AR+ VL VR+ FRPE LNRLD+IVVF+PL E
Sbjct: 725 AEALLHAAHDVLAHPGKAAAGQDPYKAARESVLAAVRRFFRPEFLNRLDDIVVFEPLRPE 784
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
QL +ARL ++A RL R + L T+ AL ++ +YDP YGARP+RRW+E+KVVT+L
Sbjct: 785 QLVDIARLMGNELAARLTPRNITLTFTEPALQFAVSHAYDPAYGARPLRRWMEQKVVTQL 844
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYRV 850
SRM+V ++ +NS V + + G + YRV
Sbjct: 845 SRMVVGGDLPDNSNVEVGLAEGGRDFDYRV 874
>gi|440291339|gb|ELP84608.1| heat shock protein, putative [Entamoeba invadens IP1]
Length = 864
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/875 (56%), Positives = 633/875 (72%), Gaps = 35/875 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+ +T T + A ++A P+H+ A+L D I + + GG+
Sbjct: 1 MDPNTWTDATVKMFKDAQQIAFQRKAPYIVPMHMMQAILDDEQNIVVRVVQMCGGD--VM 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ N+ + K+P Q PAP E+ + +V+RRA QK GDT+LA+D +IL L+E+
Sbjct: 59 RMKNAVNEEIGKVPVQDPAPVEVGLHPSSQQVLRRAMEKQKVMGDTYLALDTVILSLVEE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
++ +G+ V +V ++R +G+KV+S +T ++ALK YG DL QA GK+
Sbjct: 119 KEVLSAVGASGINVKEFTKKVTEMR--KGQKVDSKDSETQYEALKKYGNDLTAQAESGKM 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEI+RV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVPSNL R+
Sbjct: 177 DPVIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNL-QCRV 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAA 297
IALDMGAL+AGA+YRG+FEERLKAVLKEV+E++ +ILFIDEIH VLGAG T EG+MDAA
Sbjct: 236 IALDMGALIAGAQYRGQFEERLKAVLKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAA 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPML+RG+LRCIGATTLEEYRKYVEKD AFERRFQQVYVAEPS DT+ ILRG++EK
Sbjct: 296 NILKPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVAEPSEEDTLYILRGIREK 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE H+G+ I D ALV AA LS RYI R LPDKAIDLVDEACA + Q +SQPEEIDNLE
Sbjct: 356 YESHYGLTIMDSALVAAASLSKRYINARFLPDKAIDLVDEACATLFTQKNSQPEEIDNLE 415
Query: 418 RKRMQLEIELHALEKEKDKAS-------KARLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
RK QL +E ALE+E + + K RL E+ KEL + DKL L Y+KEK
Sbjct: 416 RKDTQLTVEKIALERELKQTTEDQKGNIKKRLEEIAKELSNNTDKLTKLRANYEKEKGGS 475
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTE 530
+E++ L QK E++ +AE DL AADL+Y AI E E + +L+ NQ+ E ML+
Sbjct: 476 EELKTLAQKIEDMK---HKAETTRDLEVAADLKYYAIPEAEKRLTELK-NQTKETSMLSL 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V P I +VVS+WTGIPV+R+ Q+EK RL+ L EAV AV+E++LRSR+
Sbjct: 532 QVTPQLIEDVVSKWTGIPVSRMTQSEKTRLLKLGDELHKRVVGQDEAVTAVSEAILRSRS 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GLG ++PTGSF+FLGP+GVGKTELAKALAEQLFDDEN +VRIDMSEYME HSVSRLIGA
Sbjct: 592 GLGSDKRPTGSFMFLGPSGVGKTELAKALAEQLFDDENNIVRIDMSEYMESHSVSRLIGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVGH+EGGQLTEAVRRRPYSVVLFDEVEKAH VFN LLQVLDDGRLTDG+GRTVDF
Sbjct: 652 PPGYVGHDEGGQLTEAVRRRPYSVVLFDEVEKAHQQVFNVLLQVLDDGRLTDGRGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVA-RDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSNLG++ LL+G ++ ++ VL V+K F+PE +NRLD+IVVF PL
Sbjct: 712 KNTVIIMTSNLGSDILLNGTTKDGNLKSGVKEAVLDNVKKFFKPEFINRLDDIVVFTPLR 771
Query: 759 HEQLRKVARLQMKDVAIRLAER--GVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
E+LRK+ ++QMKD+ R+ + + +T+ A+D ++ + P YGARP+RR+LEKK+
Sbjct: 772 QEELRKIVKMQMKDIVARIKKSYPTCDVELTEKAVDQIITVGFSPQYGARPMRRYLEKKI 831
Query: 817 VTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
VT++S +++ ++ EN + + A K D + +Q
Sbjct: 832 VTDISVAIIKGDLKENKKIVVGA--KDDEITVTIQ 864
>gi|157310135|emb|CAJ31809.1| 101 kDa heat shock protein [Aegilops umbellulata]
Length = 563
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/552 (84%), Positives = 508/552 (92%), Gaps = 14/552 (2%)
Query: 349 SILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDS 408
SILRGLKEKYEGHHGVRIQDRALV+AAQLS+RYI GRHLPDKAIDLVDEACANVRVQLD
Sbjct: 1 SILRGLKEKYEGHHGVRIQDRALVIAAQLSSRYIMGRHLPDKAIDLVDEACANVRVQLDG 60
Query: 409 QPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKE 468
QPEEIDNLERKR+QLE+ELHALEKEKDKASKARLV+VRKELDDLRDKLQPL M+Y+KEKE
Sbjct: 61 QPEEIDNLERKRIQLEVELHALEKEKDKASKARLVDVRKELDDLRDKLQPLQMKYRKEKE 120
Query: 469 RIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLML 528
RIDEIR LKQ+REEL F LQEAERR DLAR ADLRYGA+QEV+AAI +LEG ++ ENLML
Sbjct: 121 RIDEIRSLKQRREELQFTLQEAERRMDLARVADLRYGALQEVDAAIAKLEG-ETGENLML 179
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRS 577
TETVGPDQIAEVVSRWTGIPVTRLGQNEK RLIGLA EAVNAV E+VLRS
Sbjct: 180 TETVGPDQIAEVVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRS 239
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLI
Sbjct: 240 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLI 299
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVGHEEGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTV
Sbjct: 300 GAPPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTV 359
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DFRNTVIIMTSNLGAEHLL+GM+G +M+VARD V+QEVR+HFRPELLNRLDEIV+FDPL
Sbjct: 360 DFRNTVIIMTSNLGAEHLLAGMVGN-SMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPL 418
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
SHEQLRKVARLQMKDVA+RLAERGVALAVTDAALD++L+ SYDP+YGARPIRRW+EK++V
Sbjct: 419 SHEQLRKVARLQMKDVAVRLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRIV 478
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP-R 876
TELS+ML+REEIDENSTVYIDA+P D L Y V K+GG V+A TG KSD+LIQ+PNG
Sbjct: 479 TELSKMLIREEIDENSTVYIDAAPSKDELTYGVDKHGGLVNARTGHKSDILIQVPNGAVG 538
Query: 877 TDPSQAVKKMKI 888
D + AVKKMKI
Sbjct: 539 GDAAHAVKKMKI 550
>gi|157310137|emb|CAJ31810.1| 101 kDa heat shock protein [Aegilops umbellulata]
Length = 563
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/552 (84%), Positives = 507/552 (91%), Gaps = 14/552 (2%)
Query: 349 SILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDS 408
SILRGLKEKYEGHHGVRIQDRALV+AAQLS+RYI GRHLPDKAIDLVDEACANVRVQLDS
Sbjct: 1 SILRGLKEKYEGHHGVRIQDRALVIAAQLSSRYIMGRHLPDKAIDLVDEACANVRVQLDS 60
Query: 409 QPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKE 468
QPEEIDNLERKR+QLE+ELHALEKEKDKASKARLV+VRKELDDLRDKLQPL M+Y+KEKE
Sbjct: 61 QPEEIDNLERKRIQLEVELHALEKEKDKASKARLVDVRKELDDLRDKLQPLQMKYRKEKE 120
Query: 469 RIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLML 528
RIDEIR LKQ+REEL F LQ ERR DLAR ADLRYGA+QEV+AAI +LEG ++ ENLML
Sbjct: 121 RIDEIRSLKQRREELQFTLQRPERRMDLARVADLRYGALQEVDAAIAKLEG-ETGENLML 179
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRS 577
TETVGPDQIAEVVSRWTGIPVTRLGQNEK RLIGLA EAVNAV E+VLRS
Sbjct: 180 TETVGPDQIAEVVSRWTGIPVTRLGQNEKARLIGLADRLHQRVVGQYEAVNAVGEAVLRS 239
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLI
Sbjct: 240 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLI 299
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVGHEEGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTV
Sbjct: 300 GAPPGYVGHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTV 359
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DFRNTVIIMTSNLGAEHLL+GM+G +M+VARD V+QEVR+HFRPELLNRLDEIV+FDPL
Sbjct: 360 DFRNTVIIMTSNLGAEHLLAGMVGN-SMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPL 418
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
SHEQLRKVARLQMKDVA+RLAERGVALAVTDAALD++L+ SYDP+YGARPIRRW+EK++V
Sbjct: 419 SHEQLRKVARLQMKDVAVRLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRIV 478
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP-R 876
TELS+ML+REEIDENSTVYIDA+P D L Y V K+GG V+A TG KSD+LIQ+PNG
Sbjct: 479 TELSKMLIREEIDENSTVYIDAAPSKDELTYGVDKHGGLVNARTGHKSDILIQVPNGAVG 538
Query: 877 TDPSQAVKKMKI 888
D + AVKKMKI
Sbjct: 539 GDAAHAVKKMKI 550
>gi|302832301|ref|XP_002947715.1| hypothetical protein VOLCADRAFT_57497 [Volvox carteri f.
nagariensis]
gi|300267063|gb|EFJ51248.1| hypothetical protein VOLCADRAFT_57497 [Volvox carteri f.
nagariensis]
Length = 937
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/875 (58%), Positives = 634/875 (72%), Gaps = 34/875 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+P K T K NE + A LAT HA TP+HLA+ L +P G+ A AGGE A +
Sbjct: 3 FDPKKATQKVNEVLDSAINLATEQQHATLTPIHLAIVLFEEPQGLARSAAVRAGGEEAWR 62
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
S RV + + KLP P+P + L K++ A QK GD +L D L+ ++
Sbjct: 63 SCTRVLRRRLNKLPRVEPSPSTVVPGRELFKLLAAATKTQKDRGDAYLGADTLLGAVIAT 122
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGR-KVESASGDTTFQALKTYGRDLVEQAGKLD 179
++ + EAGV+ A+++S ++++R G + S + D F AL YG D+ A + D
Sbjct: 123 PEVSESLAEAGVSRAQLESALQEVRKTGGNGPLNSPTADANFDALCKYGTDMTANAARAD 182
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRVVR+L RRTKNNPVLIG+PGVGKTA+VEGLAQRIV+GDVP L VRLI
Sbjct: 183 PVIGRDDEIRRVVRVLCRRTKNNPVLIGDPGVGKTAIVEGLAQRIVKGDVPETLQGVRLI 242
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAAN 298
ALDMG+LVAGAK+RGEFEERL+AVL EV++ G+V+LFIDE+HLVLGAG+ + +MDAAN
Sbjct: 243 ALDMGSLVAGAKFRGEFEERLRAVLTEVQQQAGRVVLFIDELHLVLGAGKAGDSAMDAAN 302
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL EYR+++EKDAAFERRFQQV V EPSV DTV+ILRG+KE+Y
Sbjct: 303 LLKPMLARGELRCIGATTLAEYRQHIEKDAAFERRFQQVLVKEPSVADTVAILRGIKERY 362
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV I DRALV AA+LS RYIT R LPDKAIDLVDEACAN+RVQLDS+PE++D LER
Sbjct: 363 EAHHGVHITDRALVTAAELSDRYITTRFLPDKAIDLVDEACANMRVQLDSKPEQLDALER 422
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+R++L++E AL KE+D SK R EV +EL L D+L+PLM+RY +E+ER++ +RRL Q
Sbjct: 423 QRIRLQVEAAALAKERDALSKKRAAEVARELAALEDELRPLMLRYTQERERLERLRRLAQ 482
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
KR+++L +Q AE+ +LAR ADLRYGA+ EV+ I L Q + ML+E VGPD+IA
Sbjct: 483 KRDDILVNIQLAEQHNNLARIADLRYGALPEVDDEIKALRAAQP-ADAMLSEEVGPDEIA 541
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLAEAVN-----------AVAESVLRSRAGLGRPQQP 587
VVSRWTGIPV+RL Q E ++L+ L A+ AVA++VLR+RAGL +
Sbjct: 542 GVVSRWTGIPVSRLRQAECDKLMELRAALQRRVVGQEAAVGAVADAVLRARAGLAARNRG 601
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
+ SFLFLGPTGVGKTELAKALAE LFDDE +L+RIDM EYME+HSVSRLIGAPPGYVGHE
Sbjct: 602 S-SFLFLGPTGVGKTELAKALAELLFDDERMLIRIDMGEYMERHSVSRLIGAPPGYVGHE 660
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQL EAVRRRPYSVVLFDEVEKAH VFN LL +LDDGR+TD +GRTV+F NTVII+T
Sbjct: 661 EGGQLAEAVRRRPYSVVLFDEVEKAHAEVFNVLLSILDDGRVTDSKGRTVNFANTVIILT 720
Query: 708 SNLGAEHLLSGM-------------------MGKVTMQVARDQVLQEVRKHFRPELLNRL 748
SNLG+E LL G + AR VL EVR+ FRPE LNRL
Sbjct: 721 SNLGSEALLQAAAHNHNINNINDKAPADHIKTGIDPYREARQSVLSEVRRFFRPEFLNRL 780
Query: 749 DEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPI 808
D+IVVF+PL +QL +A L K++A RLA R + L TDAAL + ++YDPIYGARP+
Sbjct: 781 DDIVVFEPLQQQQLIGIAALLGKELASRLAPRNIGLRFTDAALSYAVQQAYDPIYGARPL 840
Query: 809 RRWLEKKVVTELSRMLVREEIDENSTVYIDASPKG 843
RRW+E V+TELSRML+ I +NS V +D + G
Sbjct: 841 RRWMEHVVITELSRMLISGRIGDNSDVVVDVAAGG 875
>gi|300175197|emb|CBK20508.2| unnamed protein product [Blastocystis hominis]
Length = 880
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/901 (54%), Positives = 638/901 (70%), Gaps = 66/901 (7%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+NP FT T + I+ A +A S + + T +HLA+A+L DP G A E +
Sbjct: 3 INPKLFTAYTQDNISEAFNVARSNSNPEVTNVHLAIAMLKDPKGFPYLVCQKA--EIDVE 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
++ N+ +KKLP Q P P+E+ S L K + AQ + D+ +A D ++ + D
Sbjct: 61 LLKKKLNEQLKKLPKQDPLPEELYVSGALGKTLSIAQENAASQKDSRVAQDHVLAAMFND 120
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
S + LF+ G+ ++ + +++ RG ++ G + AL YG DLV+QA GK+
Sbjct: 121 STMKSLFESVGLTKKKLDNAIKEKRGSAQANSDAPEG--AYDALNQYGIDLVKQAEEGKI 178
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRV+RIL RRTKNNPVLIGEPGVGKTA+VEGLA RIV+GDVP L VRL
Sbjct: 179 DPVIGRDEEIRRVIRILCRRTKNNPVLIGEPGVGKTAIVEGLANRIVQGDVPETLR-VRL 237
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LD+GAL+AGAKYRGEFEERLKAV+ EV+++EGK+ILFIDE+HL+LGAG+T+G+MDAAN
Sbjct: 238 ISLDLGALIAGAKYRGEFEERLKAVMNEVKQSEGKIILFIDEMHLLLGAGKTDGAMDAAN 297
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML+RG+LR IGATTLEEY+KYVEKDAAFERRFQQVYV EPSV DTVSILRGLK++Y
Sbjct: 298 LLKPMLSRGELRVIGATTLEEYKKYVEKDAAFERRFQQVYVGEPSVEDTVSILRGLKDRY 357
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E +HGVRI D ALV+AA+LS RYI R LPDKAIDLVDEACAN+RVQLDSQPEEID LER
Sbjct: 358 ERYHGVRIDDSALVLAAKLSHRYIQDRFLPDKAIDLVDEACANIRVQLDSQPEEIDRLER 417
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K++QLEIE A+E EKD+ASKARL +KL+PLMMR++KEKE +DE+RRLK
Sbjct: 418 KQLQLEIEQTAMENEKDEASKARL-----------EKLKPLMMRHEKEKEGMDELRRLKN 466
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG--NQSDENLMLTETVGPDQ 536
K E ++ A+R +D ARA+DL+Y + ++E AI + E + ++ ML E V +
Sbjct: 467 KVAETQNKIEAAKRVHDTARASDLQYYVLPDLEEAIKRQEEEIEKQKDSRMLKEEVTAND 526
Query: 537 IAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSRAGLGRPQ 585
I VVS WTGIP+ RL ++++RLI G + A+ AV+ ++LRSRAGL R
Sbjct: 527 ICHVVSNWTGIPMDRLSTSDRDRLIQLPQRLSEKVVGQSAAIEAVSNAILRSRAGLSREG 586
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+PTG FLFLGPTGVGKTELAK LA +LF+DE +VRIDMSEYME+HSVSRL+GAPPGYVG
Sbjct: 587 KPTGCFLFLGPTGVGKTELAKKLALELFNDEKHIVRIDMSEYMEKHSVSRLVGAPPGYVG 646
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG+LTEAVRRRPY+V+L DEVEKAH V+N LQV DDGRLTD QGRTVDF NTVII
Sbjct: 647 YEEGGELTEAVRRRPYNVILLDEVEKAHPDVWNLFLQVFDDGRLTDKQGRTVDFSNTVII 706
Query: 706 MTSNLGAEHLL--------------------SGMMGKVTMQV---ARDQVLQEVRKHFRP 742
MTSNLGA+ LL S VT + A +V+Q +R HFRP
Sbjct: 707 MTSNLGADILLEDVERQRRTRSNEGLCEEYPSARRVAVTPGISEEAEKRVMQVIRSHFRP 766
Query: 743 ELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPI 802
E LNRLDEI++F+PL +EQ++KV +LQ+ ++ RL E+ +AL D+AL+ ++ ++YDP+
Sbjct: 767 EFLNRLDEIIMFNPLGYEQMKKVMKLQIDELNDRLKEQNMALEADDSALEKIMEDAYDPL 826
Query: 803 YGARPIRRWLEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATG 862
YGARP++R++E+ +VT+LS+ L+ I + A KNG F +TG
Sbjct: 827 YGARPLKRYIERAIVTDLSKRLIAGTIIPGFIYTLSA------------KNGVFEYTSTG 874
Query: 863 R 863
+
Sbjct: 875 K 875
>gi|307110652|gb|EFN58888.1| hypothetical protein CHLNCDRAFT_56016 [Chlorella variabilis]
Length = 881
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/863 (58%), Positives = 640/863 (74%), Gaps = 35/863 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P KFT K E + A ELA + H Q TPLH+AV + DP G+ A G +
Sbjct: 1 MDPSKFTQKVTEILNAAQELAQESSHQQITPLHVAVVMFEDPEGV---AKAALGKQAGGG 57
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+A N ++ L Q +K ++ A QK GD+ L D L L +L+
Sbjct: 58 AAAEALNSVLRVLRKQ-------------LKALQAAGKLQKKKGDSFLGADVLFLAILDA 104
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDP 180
++ EAG+ A++ + VE+ RG V+SA+ DT F+AL YG DL +A +LDP
Sbjct: 105 REVAAALGEAGLNKAQLAAAVEEGRG--AAHVDSATADTQFEALTKYGIDLTAKAAELDP 162
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGRDEEIRRVVR+L RRTKNNPVLIGEPGVGKTA+VEGLAQR+V+GDVP+ L VR+I+
Sbjct: 163 VIGRDEEIRRVVRVLCRRTKNNPVLIGEPGVGKTAIVEGLAQRVVKGDVPATLNGVRIIS 222
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LDMG+LVAGAKYRGEFEER+KAVLKEV +A+G+VILFIDEIHLVLGAG+TEG+MDAANL
Sbjct: 223 LDMGSLVAGAKYRGEFEERIKAVLKEVADAKGQVILFIDEIHLVLGAGKTEGAMDAANLL 282
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARG+LR +GATTL EYR++VE+DAAFERRFQQV V EPSVPDTV ILRGLKE+Y
Sbjct: 283 KPMLARGELRLVGATTLAEYREHVERDAAFERRFQQVLVGEPSVPDTVQILRGLKERYAS 342
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HHGV+I DRALVVAA+L+ RYIT R LPDKAIDLVDEAC+N++VQL+S+PE ID LER+
Sbjct: 343 HHGVQISDRALVVAAELADRYITSRFLPDKAIDLVDEACSNLQVQLESKPEAIDVLERQL 402
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
++L++E ALEKEKDK S+ RL EV++EL +L D+L+PL MRY+ EK +DEI++L +K+
Sbjct: 403 IRLQVEEKALEKEKDKQSRERLAEVQRELGELGDQLKPLQMRYRAEKAALDEIKKLAKKK 462
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAEV 540
EEL L++AE DLA AD++YGA+ EVE + + + + ML++TVGP +IA V
Sbjct: 463 EELQIRLEQAENCMDLAMVADIKYGALAEVEDLLRRKQAEARKADRMLSDTVGPGEIATV 522
Query: 541 VSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQPTG 589
VS+WTGIPVT+L +++ERL +G AV AVA++VLRSRAGLG + +
Sbjct: 523 VSKWTGIPVTKLQASDRERLQNLEGYLHERVVGQDAAVKAVADAVLRSRAGLGARNRGS- 581
Query: 590 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 649
SFLFLGPTGVGKTELAKALA LFD E +++RIDMSEYME+H+VSRLIGAPPGY+GHEEG
Sbjct: 582 SFLFLGPTGVGKTELAKALAAMLFDSEKMMIRIDMSEYMEKHTVSRLIGAPPGYIGHEEG 641
Query: 650 GQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 709
GQLTEAVRRRPYSVVLFDEVEKAH V N LL VLDDGRLTD +GRTV F NT+IIMTSN
Sbjct: 642 GQLTEAVRRRPYSVVLFDEVEKAHADVMNLLLGVLDDGRLTDSKGRTVSFSNTLIIMTSN 701
Query: 710 LGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQ 769
LGA LL + A+ V++ VR+HFRPE LNR+DE+V F+PLS QLR+VARLQ
Sbjct: 702 LGATILLE----QGNSPQAKAAVMEAVRRHFRPEFLNRIDEVVQFEPLSPAQLRQVARLQ 757
Query: 770 MKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEI 829
++ RL +R + + +TDAALD +A+SYD +YGARP+RRWLE ++T LSRM++ E+
Sbjct: 758 AAELNTRLRDRAITMQLTDAALDYAVAQSYDHMYGARPLRRWLEHSIITPLSRMIISGEL 817
Query: 830 DENSTVYIDASPKG-DNLVYRVQ 851
++S V +DA G L + VQ
Sbjct: 818 PDDSKVVVDAPASGAGGLTFAVQ 840
>gi|401407262|ref|XP_003883080.1| hypothetical protein NCLIV_028370 [Neospora caninum Liverpool]
gi|325117496|emb|CBZ53048.1| hypothetical protein NCLIV_028370 [Neospora caninum Liverpool]
Length = 928
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/871 (56%), Positives = 627/871 (71%), Gaps = 28/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ D +T +A E+ + Q PLHL A+L D +Q ++ G + AQ
Sbjct: 1 MDADAWTTLVKKAFLAGQEVCRERRNPQLDPLHLFEAMLRDKQSFASQVLSQCPG-DFAQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E V ++A+ K P Q P PD + L+ V+R + Q+ D+ ++ D L L L+++
Sbjct: 60 LKEDV-HRAVLKFPQQNPPPDFPSPNHALMAVLRHGKEIQRQLNDSLMSADSLFLALVQE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
I L EAG + +++ + + +RG RK+ S+ D F+ALK YG D + A GKL
Sbjct: 119 KSIRGLLTEAGFMMKQIEEKAKSVRGL--RKISSSDDDANFEALKKYGTDFTDLAEKGKL 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGR++EIRRV+RIL RRTKNNPVLIGEPGVGK+A+VEGLA+RIV DVPSNL RL
Sbjct: 177 DPVIGREDEIRRVIRILCRRTKNNPVLIGEPGVGKSAIVEGLARRIVENDVPSNLR-CRL 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
++LD+GAL++GAKYRGEFEERL AVLKEV++A GKVILFIDEIH++LGAG+TEG++DAAN
Sbjct: 236 VSLDVGALISGAKYRGEFEERLTAVLKEVKDAAGKVILFIDEIHVILGAGKTEGALDAAN 295
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRK+VEKDAAFERRFQQV+V EPSV T+SILRGLK++Y
Sbjct: 296 LLKPMLARGELRCIGATTLDEYRKHVEKDAAFERRFQQVHVREPSVQATISILRGLKDRY 355
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
HHGVRI D ALV AAQL+ RYIT R LPDKAIDL+DEACA RVQ+DS+PE +D LER
Sbjct: 356 ASHHGVRILDSALVEAAQLADRYITARFLPDKAIDLMDEACAIARVQVDSKPEAVDVLER 415
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+++QLE+E+ ALEKEKD AS+ RL EVR+ L ++ D L+PL ++Y++EK RIDE+ +L Q
Sbjct: 416 QKVQLEVEVLALEKEKDPASQKRLAEVRQHLGEIADALRPLYLQYQQEKGRIDELGKLAQ 475
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLTETVGP 534
K++EL + A+R DL A+LR+ A+ VEA +L+ Q + +LTE VGP
Sbjct: 476 KQDELKAKIDRAQRVGDLDLVAELRFDALPGVEARFKKLQAEQEEYERTHKPLLTEVVGP 535
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
+QIA+VV RWT IPV +L Q E ERL IG +AV AV++++LRS AGL +
Sbjct: 536 EQIADVVQRWTNIPVHKLTQTETERLLAFGKTLAEQVIGQPQAVEAVSQAILRSAAGLSK 595
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
+P GSFLFLGPTGVGKTEL K +AE LFD + LVR DMSEYMEQHSVSRLIGAPPGY
Sbjct: 596 RNKPIGSFLFLGPTGVGKTELCKRVAESLFDTKERLVRFDMSEYMEQHSVSRLIGAPPGY 655
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VGH+EGGQLTE +RR PYSVVLFDEVEKAH V+N LLQVLDDGRLTD QGRTVDF NT+
Sbjct: 656 VGHDEGGQLTEEIRRNPYSVVLFDEVEKAHSQVWNVLLQVLDDGRLTDSQGRTVDFSNTI 715
Query: 704 IIMTSNLGAEHLLSG------MMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
II+TSNLGA LL A++ V+ EVRK F+PE+LNRLD+IV+F L
Sbjct: 716 IILTSNLGAAFLLEAAQRVGTEEQLAAEAAAKEMVMMEVRKFFKPEMLNRLDDIVIFKAL 775
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
++ LR+V LQM++V RLAE+ + L +TD A D V+ E++DP YGARP++R++E+ +V
Sbjct: 776 TNVNLRQVMNLQMEEVRERLAEKRIELTLTDRATDHVVHEAFDPAYGARPLKRFVERHIV 835
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVY 848
++LS L++ EI +S V D K V+
Sbjct: 836 SDLSLKLLKGEIVPDSRVLCDWDEKRRAWVW 866
>gi|221487126|gb|EEE25372.1| heat shock protein, putative [Toxoplasma gondii GT1]
Length = 921
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/865 (55%), Positives = 622/865 (71%), Gaps = 22/865 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ D +T +A E+ + Q PLHL A+L D Q ++ G + Q
Sbjct: 1 MDADSWTTLVKKAFLAGQEVCRERKNPQLDPLHLLEAMLQDKQSFATQVLSQCPG-DFEQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E V + A+ K P Q P PD + +L+ V+R A+ QK D+ ++ D L L+++
Sbjct: 60 LKEDV-HLAVLKFPQQHPPPDFPSPNHSLMAVLRHAKDIQKKMNDSLMSADSLFSALIQE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
I AG + +++ + + +RG +K+ S+ D F+ALK YG D + A GKL
Sbjct: 119 KGIRSHLTAAGFMMKQIEEKAKSVRG--SKKIASSDDDANFEALKKYGTDFTDLAEKGKL 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGR++EIRRV+RIL RRTKNNPVLIGEPGVGK+AVVEGLA+RIV DVPSNL RL
Sbjct: 177 DPVIGREDEIRRVIRILCRRTKNNPVLIGEPGVGKSAVVEGLARRIVEHDVPSNLR-CRL 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
++LD+G+L+AGAK+RGEFEERL AVL+EV++A GK+ILFIDEIH++LGAG+TEG++DAAN
Sbjct: 236 VSLDVGSLIAGAKFRGEFEERLTAVLQEVKDAAGKIILFIDEIHVILGAGKTEGALDAAN 295
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKYVEKDAAFERRFQQV+V EPSV T+SILRGLK++Y
Sbjct: 296 LLKPMLARGELRCIGATTLDEYRKYVEKDAAFERRFQQVHVREPSVQATISILRGLKDRY 355
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
HHGVRI D ALV AAQL+ RYIT R LPDKAIDL+DEACA RVQ+DS+PE +D LER
Sbjct: 356 ASHHGVRILDSALVEAAQLADRYITSRFLPDKAIDLMDEACAIARVQVDSKPEAVDVLER 415
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+++QLE+EL ALEKEKD AS+ RL EV++ L ++ D L+PL ++Y++EK RIDE+ +L Q
Sbjct: 416 QKVQLEVELLALEKEKDPASQKRLAEVKEHLGEVADALRPLYLQYQQEKARIDELGKLAQ 475
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLTETVGP 534
K++EL ++ A+R DL A+LR+ A+ VEA +L+ Q + +LTE VGP
Sbjct: 476 KQDELKAKIERAQRVGDLDLVAELRFDALPGVEARFKKLQEEQEEYERTHKPLLTEVVGP 535
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
+QIA+VV RWT IPV +L Q E ER IG +AV AV +++LRS AGL R
Sbjct: 536 EQIADVVHRWTNIPVQKLTQTETERFLTLGKSLAEQVIGQPQAVEAVTQAILRSAAGLSR 595
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
+P GSFLFLGPTGVGKTEL K +AE LFD + LVR DMSEYMEQHSVSRLIGAPPGY
Sbjct: 596 RNRPIGSFLFLGPTGVGKTELCKRVAESLFDSKERLVRFDMSEYMEQHSVSRLIGAPPGY 655
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VGH+EGGQLTE +RR PYSVVLFDEVEKAH V+N LLQVLDDGRLTD QGRTVDF NT+
Sbjct: 656 VGHDEGGQLTEEIRRNPYSVVLFDEVEKAHSQVWNVLLQVLDDGRLTDSQGRTVDFSNTI 715
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
II+TSNLGA L+ + A + V+ EVRK FRPELLNRLD+IV+F L+ LR
Sbjct: 716 IILTSNLGAGFLIEAAQRVDPVAAATEMVMMEVRKFFRPELLNRLDDIVIFKALTDVNLR 775
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+V +LQM++V RLAE+ + L +T+ A D ++ E++DP YGARP++R++E+ VV++LS
Sbjct: 776 QVMKLQMQEVRERLAEKRIELTMTNRAADHIVKEAFDPAYGARPLKRFIERHVVSDLSLK 835
Query: 824 LVREEIDENSTVYIDASPKGDNLVY 848
L++ EI +S V D K V+
Sbjct: 836 LLKGEIFADSHVVCDWDEKRRGWVW 860
>gi|237831451|ref|XP_002365023.1| heat shock protein, putative [Toxoplasma gondii ME49]
gi|211962687|gb|EEA97882.1| heat shock protein, putative [Toxoplasma gondii ME49]
gi|221506811|gb|EEE32428.1| heat shock protein, putative [Toxoplasma gondii VEG]
Length = 921
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/865 (55%), Positives = 622/865 (71%), Gaps = 22/865 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ D +T +A E+ + Q PLHL A+L D Q ++ G + Q
Sbjct: 1 MDADSWTTLVKKAFLAGQEVCRERKNPQLDPLHLLEAMLQDKQSFATQVLSQCPG-DFEQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E V + A+ K P Q P PD + +L+ V+R A+ QK D+ ++ D L L+++
Sbjct: 60 LKEDV-HLAVLKFPQQHPPPDFPSPNHSLMAVLRHAKDIQKKMNDSLMSADSLFSALVQE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
I AG + +++ + + +RG +K+ S+ D F+ALK YG D + A GKL
Sbjct: 119 KGIRSHLTAAGFMMKQIEEKAKSVRG--SKKIASSDDDANFEALKKYGTDFTDLAEKGKL 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGR++EIRRV+RIL RRTKNNPVLIGEPGVGK+AVVEGLA+RIV DVPSNL RL
Sbjct: 177 DPVIGREDEIRRVIRILCRRTKNNPVLIGEPGVGKSAVVEGLARRIVEHDVPSNLR-CRL 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
++LD+G+L+AGAK+RGEFEERL AVL+EV++A GK+ILFIDEIH++LGAG+TEG++DAAN
Sbjct: 236 VSLDVGSLIAGAKFRGEFEERLTAVLQEVKDAAGKIILFIDEIHVILGAGKTEGALDAAN 295
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKYVEKDAAFERRFQQV+V EPSV T+SILRGLK++Y
Sbjct: 296 LLKPMLARGELRCIGATTLDEYRKYVEKDAAFERRFQQVHVREPSVQATISILRGLKDRY 355
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
HHGVRI D ALV AAQL+ RYIT R LPDKAIDL+DEACA RVQ+DS+PE +D LER
Sbjct: 356 ASHHGVRILDSALVEAAQLADRYITSRFLPDKAIDLMDEACAIARVQVDSKPEAVDVLER 415
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+++QLE+EL ALEKEKD AS+ RL EV++ L ++ D L+PL ++Y++EK RIDE+ +L Q
Sbjct: 416 QKVQLEVELLALEKEKDPASQKRLAEVKEHLGEVADALRPLYLQYQQEKARIDELGKLAQ 475
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLTETVGP 534
K++EL ++ A+R DL A+LR+ A+ VEA +L+ Q + +LTE VGP
Sbjct: 476 KQDELKAKIERAQRVGDLDLVAELRFDALPGVEARFKKLQEEQEEYERTHKPLLTEVVGP 535
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
+QIA+VV RWT IPV +L Q E ER IG +AV AV +++LRS AGL R
Sbjct: 536 EQIADVVHRWTNIPVQKLTQTETERFLTLGKSLAEQVIGQPQAVEAVTQAILRSAAGLSR 595
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
+P GSFLFLGPTGVGKTEL K +AE LFD + LVR DMSEYMEQHSVSRLIGAPPGY
Sbjct: 596 RNRPIGSFLFLGPTGVGKTELCKRVAESLFDSKERLVRFDMSEYMEQHSVSRLIGAPPGY 655
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VGH+EGGQLTE +RR PYSVVLFDEVEKAH V+N LLQVLDDGRLTD QGRTVDF NT+
Sbjct: 656 VGHDEGGQLTEEIRRNPYSVVLFDEVEKAHSQVWNVLLQVLDDGRLTDSQGRTVDFSNTI 715
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
II+TSNLGA L+ + A + V+ EVRK FRPELLNRLD+IV+F L+ LR
Sbjct: 716 IILTSNLGAGFLIEAAQRVDPVAAATEMVMMEVRKFFRPELLNRLDDIVIFKALTDVNLR 775
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+V +LQM++V RLAE+ + L +T+ A D ++ E++DP YGARP++R++E+ VV++LS
Sbjct: 776 QVMKLQMQEVRERLAEKRIELTMTNRAADHIVKEAFDPAYGARPLKRFIERHVVSDLSLK 835
Query: 824 LVREEIDENSTVYIDASPKGDNLVY 848
L++ EI +S V D K V+
Sbjct: 836 LLKGEIFADSHVVCDWDEKRRGWVW 860
>gi|5302773|emb|CAB46061.1| heat shock protein like [Arabidopsis thaliana]
gi|7268173|emb|CAB78509.1| heat shock protein like [Arabidopsis thaliana]
Length = 668
Score = 917 bits (2371), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/705 (68%), Positives = 558/705 (79%), Gaps = 51/705 (7%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG-GENAA 59
MN KF +A A A S H Q TPLHL V L+SD + +F +AI +AG G+ +A
Sbjct: 1 MNDLKFDPNVKLILASARSHAMSLSHGQVTPLHLGVTLISDLTSVFYRAITSAGDGDISA 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
QS V NQ++ KL ++ GDT + V L++ LLE
Sbjct: 61 QSVVNVINQSLYKL-------------------------TKRNLGDTKVGVAVLVISLLE 95
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLD 179
DSQI D+ KEAGV +VKSEVEKLRG + +ALKTYG DLVEQAGKLD
Sbjct: 96 DSQISDVLKEAGVVPEKVKSEVEKLRG-----------EVILRALKTYGTDLVEQAGKLD 144
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGR EIRRV+ +LSRRTKNNPVLIGEPGVGKTAVVEGLAQRI++GDVP NL V+LI
Sbjct: 145 PVIGRHREIRRVIEVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKGDVPINLTGVKLI 204
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+L+ GA+VAG RG+FEERLK+VLK VEEA+GKV+LFIDEIH+ LGA + GS DAA L
Sbjct: 205 SLEFGAMVAGTTLRGQFEERLKSVLKAVEEAQGKVVLFIDEIHMALGACKASGSTDAAKL 264
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARGQLR IGATTLEEYR +VEKDAAFERRFQQV+VAEPSVPDT+SILRGLKEKYE
Sbjct: 265 LKPMLARGQLRFIGATTLEEYRTHVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKYE 324
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
GHHGVRIQDRALV++AQLS RYITGR LPDKAIDLVDE+CA+V+ QLD QPEEID+LERK
Sbjct: 325 GHHGVRIQDRALVLSAQLSERYITGRRLPDKAIDLVDESCAHVKAQLDIQPEEIDSLERK 384
Query: 420 RMQLEIELHALEKEK-DKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
MQLEIE+HALEKEK DKAS+ARL EVRKELDDLRDKL+PL ++YKKEK+ I+E RRLKQ
Sbjct: 385 VMQLEIEIHALEKEKDDKASEARLSEVRKELDDLRDKLEPLTIKYKKEKKIINETRRLKQ 444
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
R++L+ ALQEAER++D+ +AA L+YGAIQEVE+AI +LE + D N+MLTETVGP+ IA
Sbjct: 445 NRDDLMIALQEAERQHDVPKAAVLKYGAIQEVESAIAKLEKSAKD-NVMLTETVGPENIA 503
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRL QNEK+RLI LA EAV AVA ++LRSR GLGRPQQP
Sbjct: 504 EVVSRWTGIPVTRLDQNEKKRLISLADKLHERVVGQDEAVKAVAAAILRSRVGLGRPQQP 563
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG-YVGH 646
+GSFLFLGPTGVGKTELAKALAEQLFD ENLLVR+DMSEY ++ SV++LIGAPPG Y+GH
Sbjct: 564 SGSFLFLGPTGVGKTELAKALAEQLFDSENLLVRLDMSEYNDKFSVNKLIGAPPGYYIGH 623
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTD 691
EEGGQLTE VRRRPY VVLFDEVEK H++VFNTLLQVL+DGRLTD
Sbjct: 624 EEGGQLTEPVRRRPYCVVLFDEVEKTHVTVFNTLLQVLEDGRLTD 668
>gi|183235400|ref|XP_001914216.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169800573|gb|EDS89008.1| hypothetical protein EHI_005657 [Entamoeba histolytica HM-1:IMSS]
Length = 866
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/862 (55%), Positives = 628/862 (72%), Gaps = 35/862 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+K+T T + + E A +A P+H+ A++ + S I + + GG+ +
Sbjct: 1 MDPNKWTDATVQMFKESQEKAFERKNAYIMPIHMMNAIVEEESNIIIRIVEMMGGDVSKM 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E + M K+P Q P P EI T +VIRRA QK GDT+LAVD +++ L+E+
Sbjct: 61 KKE--IQEGMNKIPVQNPPPVEIGLHPTTQQVIRRAIEKQKTMGDTYLAVDVIVMSLMEE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+I + ++G+ V ++ ++R +G+ VE+ ++ ++ALK YG DL QA GK+
Sbjct: 119 KEISTIVGKSGINVLEFNKKIMEMR--KGQSVETKEAESQYEALKKYGNDLTAQAESGKM 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DP+IGRDEEI+RV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVPSNL R+
Sbjct: 177 DPIIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNL-QCRV 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAA 297
I LDMGAL+AGA+YRG+FEERLKAV+KEV+E++ +ILFIDEIH VLGAG T EG+MDAA
Sbjct: 236 IGLDMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAA 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPML+RG+LRCIGATTLEEYRKYVEKD AFERRFQQVYV+EPSV DT+ ILRG++EK
Sbjct: 296 NILKPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVSEPSVEDTLYILRGIREK 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE H+G+ I D ALV AA LS RYI GR LPDKAIDLVDEACA + Q +SQPEEID LE
Sbjct: 356 YENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDRLE 415
Query: 418 RKRMQLEIELHALE---KEKDKASKA----RLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
R+ Q+ +E ALE KE D+ K RL E+ KE+ + ++KL L + Y+KEK
Sbjct: 416 RRETQINVEKIALEREVKETDEEHKKVIEERLKEIEKEMSENKEKLTKLRINYEKEKGGS 475
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTE 530
+E++ L K E + +AE DL AADL+Y AI E E + +L+ Q+ E M++
Sbjct: 476 EEMKELATKIESMK---HKAESTKDLEVAADLKYYAIPEAEKRMAELK-KQNKETTMISL 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V QI EVVSRWTGIPVT++ Q+EK RL IG EAV AV+++++RSR
Sbjct: 532 QVTATQIEEVVSRWTGIPVTKMNQSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRG 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GLG ++P GSF+FLGP+GVGKTELAKALA +LFD E +VRIDMSEYME HSVSRLIGA
Sbjct: 592 GLGNEKRPIGSFMFLGPSGVGKTELAKALAAELFDSEENIVRIDMSEYMESHSVSRLIGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN LLQ+LD+GRLTDG+GRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NTV+IMTSNLG+E ++ G+ G+V +V ++QV++ V+K F+PE LNR+D+I+VF PL
Sbjct: 712 KNTVVIMTSNLGSEIIMKGVETTGQVKEEV-KEQVMEIVKKSFKPEFLNRMDDIIVFSPL 770
Query: 758 SHEQLRKVARLQMKDVAIRLAER--GVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
S ++L+++ +LQM +V + +R G + +T+AA++ ++ Y YGARP+RR++EK
Sbjct: 771 SEKELKEIVKLQMGEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIEKT 830
Query: 816 VVTELSRMLVREEIDENSTVYI 837
VVTE+++ ++ + E S + I
Sbjct: 831 VVTEITKSIIGGVMKEKSKIKI 852
>gi|67473761|ref|XP_652630.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
gi|183233638|ref|XP_001913888.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
gi|183235644|ref|XP_001914274.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
gi|56469501|gb|EAL47244.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|169800435|gb|EDS88950.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|169801477|gb|EDS89337.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 866
Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/862 (55%), Positives = 627/862 (72%), Gaps = 35/862 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+K+T T + + E A +A P+H+ A++ + S I + + GG+ +
Sbjct: 1 MDPNKWTDATVQMFKESQEKAFERKNAYIMPIHMMNAIVEEESNIIIRIVEMMGGDVSKM 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E + M K+P Q P P EI T +VIRRA QK GDT+LAVD +++ L+E+
Sbjct: 61 KKE--IQEGMNKIPVQNPPPVEIGLHPTTQQVIRRAIEKQKTMGDTYLAVDVIVMSLMEE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+I + +G+ V ++ ++R +G+ VE+ ++ ++ALK YG DL QA GK+
Sbjct: 119 KEISTIVGNSGINVLEFNKKIMEMR--KGQSVETKEAESQYEALKKYGNDLTAQAESGKM 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DP+IGRDEEI+RV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVPSNL R+
Sbjct: 177 DPIIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNL-QCRV 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAA 297
I LDMGAL+AGA+YRG+FEERLKAV+KEV+E++ +ILFIDEIH VLGAG T EG+MDAA
Sbjct: 236 IGLDMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAA 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPML+RG+LRCIGATTLEEYRKYVEKD AFERRFQQVYV+EPSV DT+ ILRG++EK
Sbjct: 296 NILKPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVSEPSVEDTLYILRGIREK 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE H+G+ I D ALV AA LS RYI GR LPDKAIDLVDEACA + Q +SQPEEID LE
Sbjct: 356 YENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDRLE 415
Query: 418 RKRMQLEIELHALE---KEKDKASKA----RLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
R+ Q+ +E ALE KE D+ K RL E+ KE+ + ++KL L + Y+KEK
Sbjct: 416 RRETQINVEKIALEREVKETDEEHKKVIEERLKEIEKEMSENKEKLTKLRINYEKEKGGS 475
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTE 530
+E++ L K E + +AE DL AADL+Y AI E E + +L+ Q+ E M++
Sbjct: 476 EEMKELATKIESMK---HKAESTKDLEVAADLKYYAIPEAEKRLAELK-KQNKETTMISL 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V QI EVVSRWTGIPVT++ Q+EK RL IG EAV AV+++++RSR
Sbjct: 532 QVTATQIEEVVSRWTGIPVTKMNQSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRG 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GLG ++P GSF+FLGP+GVGKTELAKALA +LFD E +VRIDMSEYME HSVSRLIGA
Sbjct: 592 GLGNEKRPIGSFMFLGPSGVGKTELAKALAAELFDSEENIVRIDMSEYMESHSVSRLIGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN LLQ+LD+GRLTDG+GRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NTV+IMTSNLG+E ++ G+ G+V QV ++QV++ V+K F+PE LNR+D+I+VF PL
Sbjct: 712 KNTVVIMTSNLGSEIIMKGVETTGQVDEQV-KEQVMEIVKKSFKPEFLNRMDDIIVFSPL 770
Query: 758 SHEQLRKVARLQMKDVAIRLAER--GVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
S ++L+++ +LQM +V + +R G + +T+AA++ ++ Y YGARP+RR++EK
Sbjct: 771 SEKELKEIVKLQMGEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIEKT 830
Query: 816 VVTELSRMLVREEIDENSTVYI 837
VVTE+++ ++ + E S + I
Sbjct: 831 VVTEITKSIIGGVMKEKSKIKI 852
>gi|67465519|ref|XP_648944.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
gi|56465258|gb|EAL43558.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 866
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/862 (55%), Positives = 627/862 (72%), Gaps = 35/862 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+K+T T + + E A +A P+H+ A++ + S I + + GG+ +
Sbjct: 1 MDPNKWTDATVQMFKESQEKAFERKNAYIMPIHMMNAIVEEESNIIIRIVEMMGGDVSKM 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E + M K+P Q P P EI T +VIRRA QK GDT+LAVD +++ L+E+
Sbjct: 61 KKE--IQEGMNKIPVQNPPPVEIGLHPTTQQVIRRAIEKQKTMGDTYLAVDVIVMSLMEE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+I + +G+ V ++ ++R +G+ VE+ ++ ++ALK YG DL QA GK+
Sbjct: 119 KEISTIVGNSGINVLEFNKKIMEMR--KGQSVETKEAESQYEALKKYGNDLTAQAESGKM 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DP+IGRDEEI+RV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVPSNL R+
Sbjct: 177 DPIIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNL-QCRV 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAA 297
I LDMGAL+AGA+YRG+FEERLKAV+KEV+E++ +ILFIDEIH VLGAG T EG+MDAA
Sbjct: 236 IGLDMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAA 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPML+RG+LRCIGATTLEEYRKYVEKD AFERRFQQVYV+EPSV DT+ ILRG++EK
Sbjct: 296 NILKPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVSEPSVEDTLYILRGIREK 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE H+G+ I D ALV AA LS RYI GR LPDKAIDLVDEACA + Q +SQPEEID LE
Sbjct: 356 YENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDRLE 415
Query: 418 RKRMQLEIELHALE---KEKDKASKA----RLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
R+ Q+ +E ALE KE D+ K RL E+ KE+ + ++KL L + Y+KEK
Sbjct: 416 RRETQINVEKIALEREVKETDEEHKKVIEERLKEIEKEMSENKEKLTKLRINYEKEKGGS 475
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTE 530
+E++ L K E + +AE DL AADL+Y AI E E + +L+ Q+ E M++
Sbjct: 476 EEMKELATKIESMK---HKAESTKDLEVAADLKYYAIPEAEKRMAELK-KQNKETTMISL 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V QI EVVSRWTGIPVT++ Q+EK RL IG EAV AV+++++RSR
Sbjct: 532 QVTATQIEEVVSRWTGIPVTKMNQSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRG 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GLG ++P GSF+FLGP+G+GKTELAKALA +LFD E +VRIDMSEYME HSVSRLIGA
Sbjct: 592 GLGNEKRPIGSFMFLGPSGIGKTELAKALAAELFDSEENIVRIDMSEYMESHSVSRLIGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN LLQ+LD+GRLTDG+GRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NTV+IMTSNLG+E ++ G+ G+V QV ++QV++ V+K F+PE LNR+D+I+VF PL
Sbjct: 712 KNTVVIMTSNLGSEIIMKGVETTGQVDEQV-KEQVMEIVKKSFKPEFLNRMDDIIVFSPL 770
Query: 758 SHEQLRKVARLQMKDVAIRLAER--GVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
S ++L+++ +LQM +V + +R G + +T+AA++ ++ Y YGARP+RR++EK
Sbjct: 771 SEKELKEIVKLQMGEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIEKT 830
Query: 816 VVTELSRMLVREEIDENSTVYI 837
VVTE+++ ++ + E S + I
Sbjct: 831 VVTEITKSIIGGVMKEKSKIKI 852
>gi|183230397|ref|XP_001913434.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
gi|169802915|gb|EDS89785.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 866
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/862 (55%), Positives = 627/862 (72%), Gaps = 35/862 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+K+T T + + E A +A P+H+ A++ + S I + + GG+ +
Sbjct: 1 MDPNKWTDATVQMFKESQEKAFERKNAYIMPIHMMNAIVEEESNIIIRIVEMMGGDVSKM 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E + M K+P Q P P EI T +VIRRA QK GDT+LAVD +++ L+E+
Sbjct: 61 KKE--IQEGMNKIPVQNPPPVEIGLHPTTQQVIRRAIEKQKTMGDTYLAVDVIVMSLMEE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+I + +G+ V ++ ++R +G+ VE+ ++ ++ALK YG DL QA GK+
Sbjct: 119 KEISTIVGNSGINVLEFNKKIMEMR--KGQSVETKEAESQYEALKKYGNDLTAQAESGKM 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DP+IGRDEEI+RV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVPSNL R+
Sbjct: 177 DPIIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNL-QCRV 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAA 297
I LDMGAL+AGA+YRG+FEERLKAV+KEV+E++ +ILFIDEIH VLGAG T EG+MDAA
Sbjct: 236 IGLDMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAA 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPML+RG+LRCIGATTLEEYRKYVEKD AFERRFQQVYV+EPSV DT+ ILRG++EK
Sbjct: 296 NILKPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVSEPSVEDTLYILRGIREK 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE H+G+ I D ALV AA LS RYI GR LPDKAIDLVDEACA + Q +SQPEEID LE
Sbjct: 356 YENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDRLE 415
Query: 418 RKRMQLEIELHALE---KEKDKASKA----RLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
R+ Q+ +E ALE KE D+ K RL E+ KE+ + ++KL L + Y+KEK
Sbjct: 416 RRETQINVEKIALEREVKETDEEHKKVIEERLKEIEKEMSENKEKLTKLRINYEKEKGGS 475
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTE 530
+E++ L K E + +AE DL AADL+Y AI E E + +L+ Q+ E M++
Sbjct: 476 EEMKELATKIESMK---HKAESTKDLEVAADLKYYAIPEAEKRLAELK-KQNKETTMISL 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V QI EVVSRWTGIPVT++ Q+EK RL IG EAV AV+++++RSR
Sbjct: 532 QVTATQIEEVVSRWTGIPVTKMNQSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRG 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GLG ++P GSF+FLGP+G+GKTELAKALA +LFD E +VRIDMSEYME HSVSRLIGA
Sbjct: 592 GLGNEKRPIGSFMFLGPSGIGKTELAKALAAELFDSEENIVRIDMSEYMESHSVSRLIGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN LLQ+LD+GRLTDG+GRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NTV+IMTSNLG+E ++ G+ G+V QV ++QV++ V+K F+PE LNR+D+I+VF PL
Sbjct: 712 KNTVVIMTSNLGSEIIMKGVETTGQVDEQV-KEQVMEIVKKSFKPEFLNRMDDIIVFSPL 770
Query: 758 SHEQLRKVARLQMKDVAIRLAER--GVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
S ++L+++ +LQM +V + +R G + +T+AA++ ++ Y YGARP+RR++EK
Sbjct: 771 SEKELKEIVKLQMGEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIEKT 830
Query: 816 VVTELSRMLVREEIDENSTVYI 837
VVTE+++ ++ + E S + I
Sbjct: 831 VVTEITKSIIGGVMKEKSKIKI 852
>gi|301097509|ref|XP_002897849.1| heat shock protein 101 [Phytophthora infestans T30-4]
gi|262106597|gb|EEY64649.1| heat shock protein 101 [Phytophthora infestans T30-4]
Length = 859
Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/878 (55%), Positives = 633/878 (72%), Gaps = 83/878 (9%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP +FT KTNE + A ++A GH+Q TPLH+A AL D +G + G N A
Sbjct: 1 MNPAEFTDKTNEYLRNAQDMAEELGHSQLTPLHVAYALFDDHNGTAKRVAELVHG-NVAG 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ V Q +KKLP QTPAP+ + A + L+K+++ +
Sbjct: 60 FKQDVMLQ-LKKLPKQTPAPESVGADSALMKMLKWTRN---------------------- 96
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQ-ALKTYGRDLVE--QAGK 177
+VK V+K+RG GR V SA+ + ++ L + R+L+E +AGK
Sbjct: 97 ---------------QVKDAVQKIRG--GRPVISAAAEENYRRTLSSTARNLIELAEAGK 139
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DPVIGRDEEIRRV+RILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIV GDVP +L + +
Sbjct: 140 IDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAIVEGLARRIVVGDVPDSL-NCK 198
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L++LDMGAL+AGAKYRGEFEERLKAVLKEV++++GK+ILFIDE+HL+LGAG+T G+MDAA
Sbjct: 199 LVSLDMGALIAGAKYRGEFEERLKAVLKEVKDSDGKIILFIDEMHLILGAGQTSGAMDAA 258
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KPMLARG+LRCIGATTL+EYR++VEKD AFERRFQQV V EPSVPDTVSILRGLKE+
Sbjct: 259 NLLKPMLARGELRCIGATTLDEYREHVEKDKAFERRFQQVMVKEPSVPDTVSILRGLKER 318
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGV+I D ALV AA+L+ RYI R +PDKAID+VDEACANVRVQLDSQPE ID LE
Sbjct: 319 YESHHGVQIMDAALVAAAKLADRYIKERFMPDKAIDIVDEACANVRVQLDSQPEVIDELE 378
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+++QL++E AL KEKD SK RL +V++EL++++D+L PL++ ++ EK R++EIR+L+
Sbjct: 379 RRQLQLQVEATALAKEKDAMSKQRLKKVQEELNEIQDELSPLILHHEAEKARVNEIRQLR 438
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDEN----LMLTET 531
+K + L ++AER DL A+DL+Y AI +V+ I E + DE+ M+ E
Sbjct: 439 EKLQHLQLKAEQAERNQDLQTASDLQYYAIPDVKRRIAAAEEVKKREDEDEMQHKMVEEV 498
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V DQI EVV+RWTGIPV+RL + +RL +G EAV AV ++VLRSRAG
Sbjct: 499 VREDQICEVVARWTGIPVSRLTSSMGDRLMHLDERLHKRVVGQDEAVKAVCDAVLRSRAG 558
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L R QPTGSFLFLGPTGVGKTELAKALA +LFDD+ +VRIDMSEYME+H+VSRLIGAP
Sbjct: 559 LARSGQPTGSFLFLGPTGVGKTELAKALAYELFDDDKHMVRIDMSEYMEEHTVSRLIGAP 618
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PG+VG++E GQLTEAVRR PY+VVL DE+EKAH V N LLQVLDDGRLTD GRTVDF
Sbjct: 619 PGFVGYQESGQLTEAVRRNPYNVVLLDEIEKAHPKVLNILLQVLDDGRLTDSHGRTVDFA 678
Query: 701 NTVIIMTSNLGAEHLL--SGMMGKVTMQVA-------------------RDQVLQEVRKH 739
NTVIIMTSN+GAEHLL + + + + ++ R+ VLQ++R+
Sbjct: 679 NTVIIMTSNIGAEHLLFENSLSPRASKKIKTENDFVDTESEAKRVFANQRELVLQQLRRT 738
Query: 740 FRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESY 799
RPELLNRLD+IVVF+PL +LR++ LQ + V RL E +++ V+ ALD++L ESY
Sbjct: 739 VRPELLNRLDDIVVFEPLGRNELRQIVMLQFESVINRLKESQISVNVSTPALDVILDESY 798
Query: 800 DPIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYI 837
+P YGARPI+R++EK +VT+LS++++ ++ S V I
Sbjct: 799 EPQYGARPIKRYIEKHIVTDLSKLIISGQMHAKSHVEI 836
>gi|167389932|ref|XP_001739140.1| heat shock protein [Entamoeba dispar SAW760]
gi|165897287|gb|EDR24500.1| heat shock protein, putative [Entamoeba dispar SAW760]
Length = 866
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/864 (54%), Positives = 630/864 (72%), Gaps = 37/864 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+K+T T + + E+A +A P+H+ A++ + S I + + GG+
Sbjct: 1 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGD--VN 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
++ + M K+P Q P P +I T +V+RRA QK GD++LA+D +++ L+E+
Sbjct: 59 KLKKEIKETMNKIPVQNPPPVDIGLHPTTQQVLRRAIEKQKIMGDSYLAIDVIVMSLMEE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+I + +G+ V ++ ++R +G+ VE+ ++ ++ALK YG DL QA GK+
Sbjct: 119 KEISTIVGNSGINVKEFNKKITEMR--KGQSVETKEAESQYEALKKYGNDLTAQAESGKM 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DP+IGRDEEI+RV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVPSNL R+
Sbjct: 177 DPIIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNL-QCRV 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAA 297
I LDMGAL+AGA+YRG+FEERLKAV+KEV+E++ +ILFIDEIH VLGAG T EG+MDAA
Sbjct: 236 IGLDMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAA 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPML+RG+LRCIGATTLEEYRKYVEKD AFERRFQQVYV EPS DT+ ILRG++EK
Sbjct: 296 NILKPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVNEPSEEDTLYILRGIREK 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE H+G+ I D ALV AA LS RYI GR LPDKAIDLVDEACA + Q +SQPEEID LE
Sbjct: 356 YENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDKLE 415
Query: 418 RKRMQLEIELHALE---KEKD----KASKARLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
R+ QL +E ALE KE D K K RL E+ KEL + ++KL L + Y+KEK
Sbjct: 416 RRETQLNVEKIALERDIKESDEDHNKMIKERLQEIEKELSENKEKLTKLRINYEKEKGGS 475
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTE 530
+E++ L K E + +AE DL AADL+Y AI E E + +L+ Q+ E M++
Sbjct: 476 EEMKELATKIEAMK---HKAESTKDLEVAADLKYYAIPEAEKRMKELK-EQNKETTMISL 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V P QI EVVSRWTGIPVT++ Q EK RL IG EAV AV+++++RSR
Sbjct: 532 QVTPTQIEEVVSRWTGIPVTKMNQTEKTRLMNLEEELHKRVIGQNEAVTAVSDAIIRSRG 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GLG ++PTGSF+FLGP+GVGKTELAKALA +LFDDE +VRIDMSEYME HSVSRLIGA
Sbjct: 592 GLGNEKRPTGSFMFLGPSGVGKTELAKALAVELFDDEQNIVRIDMSEYMESHSVSRLIGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEA+RR+PYSV+LFDE+EKAH VFN LLQ+LD+GRLTDG+GRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NT++IMTSNLG+E ++ G+ G+V+ +V ++ V++ V+K F+PE LNRLD+I+VF PL
Sbjct: 712 KNTIVIMTSNLGSEIIMKGVETEGQVSKKV-KETVMEIVKKTFKPEFLNRLDDIIVFSPL 770
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALA---VTDAALDIVLAESYDPIYGARPIRRWLEK 814
S ++L+++ +LQM +V I++ ++ L+ +T+AA++ ++ Y YGARP+RR++EK
Sbjct: 771 SEKELKEIVKLQMGEV-IKMIKKRYPLSEVEMTEAAIEGIIKSGYSIAYGARPMRRYIEK 829
Query: 815 KVVTELSRMLVREEIDENSTVYID 838
VVT +++ ++ + E + + ID
Sbjct: 830 TVVTSITKSIISGMMKEKNKIQID 853
>gi|183233250|ref|XP_001913827.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
gi|169801663|gb|EDS89397.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 866
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/862 (55%), Positives = 626/862 (72%), Gaps = 35/862 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+K+T T + + E A +A P+H+ A++ + S I + + GG+ +
Sbjct: 1 MDPNKWTDATVQMFKESQEKAFERKNAYIMPIHMMNAIVEEESNIIIRIVEMMGGDVSKM 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E + M K+ Q P P EI T +VIRRA QK GDT+LAVD +++ L+E+
Sbjct: 61 KKE--IQEGMNKIAVQNPPPVEIGLHPTTQQVIRRAIEKQKTMGDTYLAVDVIVMSLMEE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+I + +G+ V ++ ++R +G+ VE+ ++ ++ALK YG DL QA GK+
Sbjct: 119 KEISTIVGNSGINVLEFNKKIMEMR--KGQSVETKEAESQYEALKKYGNDLTAQAESGKM 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DP+IGRDEEI+RV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVPSNL R+
Sbjct: 177 DPIIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNL-QCRV 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAA 297
I LDMGAL+AGA+YRG+FEERLKAV+KEV+E++ +ILFIDEIH VLGAG T EG+MDAA
Sbjct: 236 IGLDMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAA 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPML+RG+LRCIGATTLEEYRKYVEKD AFERRFQQVYV+EPSV DT+ ILRG++EK
Sbjct: 296 NILKPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVSEPSVEDTLYILRGIREK 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE H+G+ I D ALV AA LS RYI GR LPDKAIDLVDEACA + Q +SQPEEID LE
Sbjct: 356 YENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDRLE 415
Query: 418 RKRMQLEIELHALE---KEKDKASKA----RLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
R+ Q+ +E ALE KE D+ K RL E+ KE+ + ++KL L + Y+KEK
Sbjct: 416 RRETQINVEKIALEREVKETDEEHKKVIEERLKEIEKEMSENKEKLTKLRINYEKEKGGS 475
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTE 530
+E++ L K E + +AE DL AADL+Y AI E E + +L+ Q+ E M++
Sbjct: 476 EEMKELATKIESMK---HKAESTKDLEVAADLKYYAIPEAEKRLAELK-KQNKETTMISL 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V QI EVVSRWTGIPVT++ Q+EK RL IG EAV AV+++++RSR
Sbjct: 532 QVTATQIEEVVSRWTGIPVTKMNQSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRG 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GLG ++P GSF+FLGP+GVGKTELAKALA +LFD E +VRIDMSEYME HSVSRLIGA
Sbjct: 592 GLGNEKRPIGSFMFLGPSGVGKTELAKALAAELFDSEENIVRIDMSEYMESHSVSRLIGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN LLQ+LD+GRLTDG+GRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NTV+IMTSNLG+E ++ G+ G+V QV ++QV++ V+K F+PE LNR+D+I+VF PL
Sbjct: 712 KNTVVIMTSNLGSEIIMKGVETTGQVDEQV-KEQVMEIVKKSFKPEFLNRMDDIIVFSPL 770
Query: 758 SHEQLRKVARLQMKDVAIRLAER--GVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
S ++L+++ +LQM +V + +R G + +T+AA++ ++ Y YGARP+RR++EK
Sbjct: 771 SEKELKEIVKLQMGEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIEKT 830
Query: 816 VVTELSRMLVREEIDENSTVYI 837
VVTE+++ ++ + E S + I
Sbjct: 831 VVTEITKSIIGGMMKEKSKIKI 852
>gi|183235698|ref|XP_001914289.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
gi|169800404|gb|EDS88935.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 866
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/862 (55%), Positives = 626/862 (72%), Gaps = 35/862 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+K+T T + + E A +A P+H+ A++ + S I + + GG+ +
Sbjct: 1 MDPNKWTDATVQMFKESQEKAFERKNAYIMPIHMMNAIVEEESNIIIRIVEMMGGDVSKM 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E + M K+ Q P P EI T +VIRRA QK GDT+LAVD +++ L+E+
Sbjct: 61 KKE--IQEGMNKIAVQNPPPVEIGLHPTTQQVIRRAIEKQKTMGDTYLAVDVIVMSLMEE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+I + +G+ V ++ ++R +G+ VE+ ++ ++ALK YG DL QA GK+
Sbjct: 119 KEISTIVGNSGINVLEFNKKIMEMR--KGQSVETKEAESQYEALKKYGNDLTAQAESGKM 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DP+IGRDEEI+RV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVPSNL R+
Sbjct: 177 DPIIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNL-QCRV 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAA 297
I LDMGAL+AGA+YRG+FEERLKAV+KEV+E++ +ILFIDEIH VLGAG T EG+MDAA
Sbjct: 236 IGLDMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAA 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPML+RG+LRCIGATTLEEYRKYVEKD AFERRFQQVYV+EPSV DT+ ILRG++EK
Sbjct: 296 NILKPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVSEPSVEDTLYILRGIREK 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE H+G+ I D ALV AA LS RYI GR LPDKAIDLVDEACA + Q +SQPEEID LE
Sbjct: 356 YENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDRLE 415
Query: 418 RKRMQLEIELHALE---KEKDKASKA----RLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
R+ Q+ +E ALE KE D+ K RL E+ KE+ + ++KL L + Y+KEK
Sbjct: 416 RRETQINVEKIALEREVKETDEEHKKVIEERLKEIEKEMSENKEKLTKLRINYEKEKGGS 475
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTE 530
+E++ L K E + +AE DL AADL+Y AI E E + +L+ Q+ E M++
Sbjct: 476 EEMKELATKIESMK---HKAESTKDLEVAADLKYYAIPEAEKRLAELK-KQNKETTMISL 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V QI EVVSRWTGIPVT++ Q+EK RL IG EAV AV+++++RSR
Sbjct: 532 QVTATQIEEVVSRWTGIPVTKMNQSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRG 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GLG ++P GSF+FLGP+GVGKTELAKALA +LFD E +VRIDMSEYME HSVSRLIGA
Sbjct: 592 GLGNEKRPIGSFMFLGPSGVGKTELAKALAAELFDSEENIVRIDMSEYMESHSVSRLIGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN LLQ+LD+GRLTDG+GRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NTV+IMTSNLG+E ++ G+ G+V QV ++QV++ V+K F+PE LNR+D+I+VF PL
Sbjct: 712 KNTVVIMTSNLGSEIIMKGVETTGQVDEQV-KEQVMEIVKKSFKPEFLNRMDDIIVFSPL 770
Query: 758 SHEQLRKVARLQMKDVAIRLAER--GVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
S ++L+++ +LQM +V + +R G + +T+AA++ ++ Y YGARP+RR++EK
Sbjct: 771 SEKELKEIVKLQMGEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIEKT 830
Query: 816 VVTELSRMLVREEIDENSTVYI 837
VVTE+++ ++ + E S + I
Sbjct: 831 VVTEITKSIIGGVMKEKSKIKI 852
>gi|167383345|ref|XP_001736499.1| heat shock protein [Entamoeba dispar SAW760]
gi|165901109|gb|EDR27269.1| heat shock protein, putative [Entamoeba dispar SAW760]
Length = 866
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/864 (54%), Positives = 630/864 (72%), Gaps = 37/864 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+K+T T + + E+A +A P+H+ A++ + S I + + GG+
Sbjct: 1 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGD--VN 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
++ + M K+P Q P P +I T +V+RRA QK GD++LA+D +++ L+E+
Sbjct: 59 KLKKEIKETMNKIPVQNPPPVDIGLHPTTQQVLRRAIEKQKRMGDSYLAIDVIVMSLMEE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+I + +G+ V ++ ++R +G+ VE+ ++ ++ALK YG DL QA GK+
Sbjct: 119 KEISTIVGNSGINVKEFNKKITEMR--KGQSVETKEAESQYEALKKYGNDLTAQAESGKM 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DP+IGRDEEI+RV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVPSNL R+
Sbjct: 177 DPIIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNL-QCRV 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAA 297
I LDMGAL+AGA+YRG+FEERLKAV+KEV+E++ +ILFIDEIH VLGAG T EG+MDAA
Sbjct: 236 IGLDMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAA 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPML+RG+LRCIGATTLEEYRKYVEKD AFERRFQQVYV EPS DT+ ILRG++EK
Sbjct: 296 NILKPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVKEPSEEDTLYILRGIREK 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE H+G+ I D ALV AA LS RYI GR LPDKAIDLVDEACA + Q +SQPEEID LE
Sbjct: 356 YENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDKLE 415
Query: 418 RKRMQLEIELHALE---KEKD----KASKARLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
R+ QL +E ALE KE D K K RL E+ KEL + ++KL L + Y+KEK
Sbjct: 416 RRETQLNVEKIALERDIKESDEDHNKMIKERLQEIEKELSENKEKLTKLRINYEKEKGGS 475
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTE 530
+E++ L K E + +AE DL AADL+Y AI E E + +L+ Q+ E M++
Sbjct: 476 EEMKELATKIEAMK---HKAESTKDLEVAADLKYYAIPEAEKRMKELK-EQNKETTMISL 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V P QI EVVSRWTGIPVT++ Q EK RL IG EAV AV+++++RSR
Sbjct: 532 QVTPTQIEEVVSRWTGIPVTKMNQTEKTRLMNLEEELHKRVIGQNEAVTAVSDAIIRSRG 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GLG ++PTGSF+FLGP+GVGKTELAKALA +LFDDE +VRIDMSEYME HSVSRLIGA
Sbjct: 592 GLGNEKRPTGSFMFLGPSGVGKTELAKALAVELFDDEQNIVRIDMSEYMESHSVSRLIGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEA+RR+PYSV+LFDE+EKAH VFN LLQ+LD+GRLTDG+GRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NT++IMTSNLG+E ++ G+ G+V+ +V ++ V++ V+K F+PE LNRLD+I+VF PL
Sbjct: 712 KNTIVIMTSNLGSEIIMKGVETEGQVSRKV-KETVMEIVKKTFKPEFLNRLDDIIVFSPL 770
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALA---VTDAALDIVLAESYDPIYGARPIRRWLEK 814
S ++L+++ +LQM +V I++ ++ L+ +T+AA++ ++ Y YGARP+RR++EK
Sbjct: 771 SEKELKEIVKLQMGEV-IKMIKKRYPLSEVEMTEAAIEGIIKSGYSIAYGARPMRRYIEK 829
Query: 815 KVVTELSRMLVREEIDENSTVYID 838
VVT +++ ++ + E + + ID
Sbjct: 830 TVVTSITKSIISGIMKEKNKIQID 853
>gi|167386790|ref|XP_001737903.1| heat shock protein [Entamoeba dispar SAW760]
gi|165899112|gb|EDR25793.1| heat shock protein, putative [Entamoeba dispar SAW760]
Length = 866
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/864 (54%), Positives = 630/864 (72%), Gaps = 37/864 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+K+T T + + E+A +A P+H+ A++ + S I + + GG+
Sbjct: 1 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMIGGD--VN 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
++ + M K+P Q P P +I T +V+RRA QK GD++LA+D +++ L+E+
Sbjct: 59 KLKKEIKETMNKIPVQNPPPVDIGLHPTTQQVLRRAIEKQKIMGDSYLAIDVIVMSLMEE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+I + +G+ V ++ ++R +G+ VE+ ++ ++ALK YG DL QA GK+
Sbjct: 119 KEISTIVGNSGINVKEFNKKITEMR--KGQSVETKEAESQYEALKKYGNDLTAQAESGKM 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DP+IGRDEEI+RV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVPSNL R+
Sbjct: 177 DPIIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNL-QCRV 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAA 297
I LDMGAL+AGA+YRG+FEERLKAV+KEV+E++ +ILFIDEIH VLGAG T EG+MDAA
Sbjct: 236 IGLDMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAA 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPML+RG+LRCIGATTLEEYRKYVEKD AFERRFQQVYV EPS DT+ ILRG++EK
Sbjct: 296 NILKPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVKEPSEEDTLYILRGIREK 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE H+G+ I D ALV AA LS RYI GR LPDKAIDLVDEACA + Q +SQPEEID LE
Sbjct: 356 YENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDKLE 415
Query: 418 RKRMQLEIELHALE---KEKD----KASKARLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
R+ QL +E ALE KE D K K RL E+ KEL + ++KL L + Y+KEK
Sbjct: 416 RRETQLNVEKIALERDIKESDEDHNKMIKERLQEIEKELSENKEKLTKLRINYEKEKGGS 475
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTE 530
+E++ L K E + +AE DL AADL+Y AI E E + +L+ Q+ E M++
Sbjct: 476 EEMKELATKIEAMK---HKAESTKDLEVAADLKYYAIPEAEKRMKELK-EQNKETTMISL 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V P QI EVVSRWTGIPVT++ Q EK RL IG EAV AV+++++RSR
Sbjct: 532 QVTPTQIEEVVSRWTGIPVTKMNQTEKTRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRG 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GLG ++PTGSF+FLGP+GVGKTELAKALA +LFDDE +VRIDMSEYME HSVSRLIGA
Sbjct: 592 GLGNEKRPTGSFMFLGPSGVGKTELAKALAVELFDDEQNIVRIDMSEYMESHSVSRLIGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEA+RR+PYSV+LFDE+EKAH VFN LLQ+LD+GRLTDG+GRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NT++IMTSNLG+E ++ G+ G+V+ +V ++ V++ V+K F+PE LNRLD+I++F PL
Sbjct: 712 KNTIVIMTSNLGSEIIMKGVETEGQVSRKV-KETVMEIVKKTFKPEFLNRLDDIIIFSPL 770
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALA---VTDAALDIVLAESYDPIYGARPIRRWLEK 814
S ++L+++ +LQM +V I++ ++ L+ +T++A++ ++ Y YGARP+RR++EK
Sbjct: 771 SEKELKEIVKLQMGEV-IKMIKKRYPLSEVEMTESAIEGIIKSGYSIAYGARPMRRYIEK 829
Query: 815 KVVTELSRMLVREEIDENSTVYID 838
VVT +++ ++ + E + + ID
Sbjct: 830 TVVTSITKSIISGMMKEKNKIQID 853
>gi|345893543|ref|ZP_08844339.1| chaperone ClpB [Desulfovibrio sp. 6_1_46AFAA]
gi|345046102|gb|EGW49996.1| chaperone ClpB [Desulfovibrio sp. 6_1_46AFAA]
Length = 867
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/860 (54%), Positives = 625/860 (72%), Gaps = 26/860 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K EAI A +A GH + HLA+AL+ GI + + + G + A
Sbjct: 1 MDINKFTEKAREAIGEAQTIAAGMGHQETDAEHLALALVQQEKGIVPRILEHMGIQPKAL 60
Query: 61 SAERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ +++K PS + P +I + L K++ AQ + D +++VD L L
Sbjct: 61 AV--ALETSLRKRPSVSGGGMDPTKIMITPRLAKILGEAQNEARRMKDEYVSVDHLFAAL 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E S +G +FKE + A +E+LRG G +V SA+ + TF+AL Y RDLV+
Sbjct: 119 TEVEPSSPLGQVFKEYNITRAGFVKAMEELRG--GARVTSANPEDTFEALSKYARDLVDA 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GK+DPVIGRD EIRRV+RILSRRTKNNPVLIGE GVGKTA+VEGLA RIV+GDVP
Sbjct: 177 ARQGKMDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIVEGLAFRIVKGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L +L ALDMGAL+AGAKYRGEFEERLKAVL EVE++EG++ILFIDE+H ++GAG+TEG
Sbjct: 237 LKGRKLFALDMGALIAGAKYRGEFEERLKAVLNEVEKSEGRIILFIDELHTIVGAGKTEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA NL KPMLARG+L CIGATT++EYRKY+EKD A ERRFQ V V EP+V D +SILR
Sbjct: 297 SMDAGNLLKPMLARGELHCIGATTVDEYRKYIEKDPALERRFQPVLVEEPTVEDAISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHGVRI D A+V A LS RYIT R LPDKAIDL+DEA A +R ++DS P +
Sbjct: 357 GLKERFEVHHGVRISDSAIVEAVVLSHRYITDRQLPDKAIDLIDEAAAMIRTEIDSLPAD 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK MQLEIE AL +E D+AS+ RL + EL +LR++ + +++ EK ID
Sbjct: 417 LDEVNRKVMQLEIEREALRRETDEASRERLERLENELSELRNQQAAMRKQWESEKGSIDN 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTE 530
+R +K++ E+ A+++AER YDL RAA+L+Y + E+E + G+ + D +L E
Sbjct: 477 VREIKEQIEQTKLAIEQAERAYDLNRAAELKYSKLLELEKKLADASGDTQEGDAPRLLRE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V PD +AE+V++WTGIPVTRL ++E+E+L+ L+ EAVNAV+++VLR+RA
Sbjct: 537 EVRPDDVAEIVAKWTGIPVTRLLESEREKLLRLSEQLHERVVGQDEAVNAVSDAVLRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +PTGSF+FLGPTGVGKTEL+KALAE LFD E+ +VR+DMSEYME+HSVSRLIGA
Sbjct: 597 GLSDPSRPTGSFIFLGPTGVGKTELSKALAEALFDTEDNMVRLDMSEYMEKHSVSRLIGA 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG++EGGQLTEAVRR+PYSV+LFDE+EKAH VFNTLLQ+LDDGRLTD QGRTVDF
Sbjct: 657 PPGYVGYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNTLLQLLDDGRLTDSQGRTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
RN ++IMTSN+G+ HLL G+ T+ + AR+QV++E+R HFRPE LNR+DE VVF PL
Sbjct: 717 RNCIVIMTSNIGSMHLLDGIAPDGTLKEGAREQVMEELRGHFRPEFLNRVDETVVFLPLR 776
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
+Q+ ++ LQ+K + RL ER + L++++ A D V +YDP+YGARP++R+L++ V T
Sbjct: 777 RDQIGRIVELQLKRLRERLEERKIKLSMSEEARDFVAEAAYDPVYGARPLKRYLQQAVET 836
Query: 819 ELSRMLVREEIDENSTVYID 838
L+R LV +I + V+++
Sbjct: 837 PLARELVSGKIRDGQHVHVE 856
>gi|303327880|ref|ZP_07358320.1| ATP-dependent chaperone protein ClpB [Desulfovibrio sp. 3_1_syn3]
gi|302862241|gb|EFL85175.1| ATP-dependent chaperone protein ClpB [Desulfovibrio sp. 3_1_syn3]
Length = 867
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/860 (54%), Positives = 626/860 (72%), Gaps = 26/860 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K EAI A +A GH + HLA+AL+ GI + + + G + A
Sbjct: 1 MDINKFTEKAREAIGEAQTIAAGMGHQETDAEHLALALVQQEKGIVPRILEHMGIQPKAL 60
Query: 61 SAERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ +++K PS + P +I + L K++ AQ + D +++VD L L
Sbjct: 61 AV--ALETSLRKRPSVSGGGMDPTKIMITPRLAKILGEAQNEARRMKDEYVSVDHLFAAL 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E S +G +FKE + A +E+LRG G +V SA+ + TF+AL Y RDLV+
Sbjct: 119 TEVEPSSPLGQVFKEYNITRAGFVKAMEELRG--GARVTSANPEDTFEALSKYARDLVDA 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GK+DPVIGRD EIRRV+RILSRRTKNNPVLIGE GVGKTA+VEGLA RIV+GDVP
Sbjct: 177 ARQGKMDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIVEGLAFRIVKGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L +L ALDMGAL+AGAKYRGEFEERLKAVL EVE++EG++ILFIDE+H ++GAG+TEG
Sbjct: 237 LKGRKLFALDMGALIAGAKYRGEFEERLKAVLNEVEKSEGRIILFIDELHTIVGAGKTEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA NL KPMLARG+L CIGATT++EYRKY+EKD A ERRFQ V V EP+V D +SILR
Sbjct: 297 SMDAGNLLKPMLARGELHCIGATTVDEYRKYIEKDPALERRFQPVLVEEPTVEDAISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHGVRI D A+V A LS RYIT R LPDKAIDL+DEA A +R ++DS P +
Sbjct: 357 GLKERFEVHHGVRISDSAIVEAVVLSHRYITDRQLPDKAIDLIDEAAAMIRTEIDSLPAD 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK MQLEIE AL +E D+AS+ RL + EL +LR++ + +++ EK ID
Sbjct: 417 LDEVNRKVMQLEIEREALRRETDEASRERLERLENELSELRNQQAAMRKQWESEKGSIDN 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL--MLTE 530
+R +K++ E+ A+++AER YDL RAA+L+Y + E+E + G+ + ++ +L E
Sbjct: 477 VREIKEQIEQTKLAIEQAERAYDLNRAAELKYSKLLELEKKLADASGDTQEGDVPRLLRE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V PD +AE+V++WTGIPVTRL ++E+E+L+ L+ EAVNAV+++VLR+RA
Sbjct: 537 EVRPDDVAEIVAKWTGIPVTRLLESEREKLLRLSEQLHERVVGQDEAVNAVSDAVLRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +PTGSF+FLGPTGVGKTEL+KALAE LFD E+ +VR+DMSEYME+HSVSRLIGA
Sbjct: 597 GLSDPSRPTGSFIFLGPTGVGKTELSKALAEALFDTEDNMVRLDMSEYMEKHSVSRLIGA 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG++EGGQLTEAVRR+PYSV+LFDE+EKAH VFNTLLQ+LDDGRLTD QGRTVDF
Sbjct: 657 PPGYVGYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNTLLQLLDDGRLTDSQGRTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
RN ++IMTSN+G+ HLL G+ T+ + AR+QV++E+R HFRPE LNR+DE VVF PL
Sbjct: 717 RNCIVIMTSNIGSMHLLDGIAPDGTLKEGAREQVMEELRGHFRPEFLNRVDETVVFLPLR 776
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
+Q+ ++ LQ+K + RL ER + L++++ A D V +YDP+YGARP++R+L++ V T
Sbjct: 777 RDQIGRIVELQLKRLRERLEERKIKLSMSEEARDFVAEAAYDPVYGARPLKRYLQQAVET 836
Query: 819 ELSRMLVREEIDENSTVYID 838
L+R LV +I + V+++
Sbjct: 837 PLARELVSGKIRDGQHVHVE 856
>gi|167383993|ref|XP_001736770.1| heat shock protein [Entamoeba dispar SAW760]
gi|165900729|gb|EDR26975.1| heat shock protein, putative [Entamoeba dispar SAW760]
Length = 866
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/864 (54%), Positives = 630/864 (72%), Gaps = 37/864 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+K+T T + + E+A +A P+H+ A++ + S I + + GG+
Sbjct: 1 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGD--VN 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
++ + M K+ Q P P +I T +V+RRA QK GD++LA+D +++ L+E+
Sbjct: 59 KLKKEIKETMNKIAVQNPPPVDIGLHPTTQQVLRRAIEKQKRMGDSYLAIDVIVMSLMEE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+I + +G+ V ++ ++R +G+ VE+ ++ ++ALK YG DL QA GK+
Sbjct: 119 KEISTIVGNSGINVKEFNKKITEMR--KGQSVETKEAESQYEALKKYGNDLTAQAESGKM 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DP+IGRDEEI+RV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVPSNL R+
Sbjct: 177 DPIIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNL-QCRV 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAA 297
I LDMGAL+AGA+YRG+FEERLKAV+KEV+E++ +ILFIDEIH VLGAG T EG+MDAA
Sbjct: 236 IGLDMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAA 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPML+RG+LRCIGATTLEEYRKYVEKD AFERRFQQVYV EPS DT+ ILRG++EK
Sbjct: 296 NILKPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVKEPSEEDTLYILRGIREK 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE H+G+ I D ALV AA LS RYI GR LPDKAIDLVDEACA + Q +SQPEEID LE
Sbjct: 356 YENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDKLE 415
Query: 418 RKRMQLEIELHALE---KEKD----KASKARLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
R+ QL +E ALE KE D K K RL E+ KEL + ++KL L + Y+KEK
Sbjct: 416 RRETQLNVEKIALERDIKESDEDHNKMIKERLQEIEKELSENKEKLTKLRINYEKEKGGS 475
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTE 530
+E++ L K E + +AE DL AADL+Y AI E E + +L+ Q+ E M++
Sbjct: 476 EEMKELATKIEAMK---HKAESTKDLEVAADLKYYAIPEAEKRMKELK-EQNKETTMISL 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRA 579
V P QI EVVSRWTGIPVT++ Q EK +R+IG EAV AV+++++RSR
Sbjct: 532 QVTPTQIEEVVSRWTGIPVTKMNQTEKIRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRG 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GLG ++PTGSF+FLGP+GVGKTELAKALA +LFDDE +VRIDMSEYME HSVSRLIGA
Sbjct: 592 GLGNEKRPTGSFMFLGPSGVGKTELAKALAVELFDDEQNIVRIDMSEYMESHSVSRLIGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEA+RR+PYSV+LFDE+EKAH VFN LLQ+LD+GRLTDG+GRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NT++IMTSNLG+E ++ G+ G+V+ +V ++ V++ V+K F+PE LNRLD+I+VF PL
Sbjct: 712 KNTIVIMTSNLGSEIIMKGVEREGQVSRKV-KETVMEIVKKTFKPEFLNRLDDIIVFSPL 770
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALA---VTDAALDIVLAESYDPIYGARPIRRWLEK 814
S ++L+++ +LQM +V I++ ++ L+ +T+AA++ ++ Y YGARP+RR++EK
Sbjct: 771 SEKELKEIVKLQMGEV-IKMIKKRYPLSEVEMTEAAIEGIIKSGYSIAYGARPMRRYIEK 829
Query: 815 KVVTELSRMLVREEIDENSTVYID 838
VVT +++ ++ + E + + ID
Sbjct: 830 TVVTSITKSIISGMMKEKNKIQID 853
>gi|225174179|ref|ZP_03728178.1| ATP-dependent chaperone ClpB [Dethiobacter alkaliphilus AHT 1]
gi|225169964|gb|EEG78759.1| ATP-dependent chaperone ClpB [Dethiobacter alkaliphilus AHT 1]
Length = 858
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/866 (53%), Positives = 637/866 (73%), Gaps = 24/866 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT K A+ A +++ H HL +LL +G+ + ++ AGG
Sbjct: 1 MDISKFTEKAQVALKEAQDISVRKSHQTVDAEHLLQSLLEQENGLVPKLLSKAGGNIETL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
S+ NQ++ K+P+ + A + + +++ RAQ K D +++V+ L+L + ED
Sbjct: 61 SSR--LNQSLDKIPAVSGAGSTY-MTQRMNQILVRAQDEAKNLTDEYVSVEHLVLAMFED 117
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ I L E+GV A + ++RG + ++ SA+ + T++AL+ YGRDL E A KL
Sbjct: 118 TTISKLLSESGVTRASFMEAMTQVRGNQ--RITSANPEDTYEALEKYGRDLTEMAEQNKL 175
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD EIRRV+++LSRRTKNNPVLIGEPGVGKTA+ EGLA+RIV GDVP +L D R+
Sbjct: 176 DPVIGRDTEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLARRIVAGDVPDSLKDRRI 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
++LDMGALVAGAKYRGEFEERLKAVL+EV ++ G++ILFIDE+H V+GAG+TEGSMDA N
Sbjct: 236 VSLDMGALVAGAKYRGEFEERLKAVLQEVTQSAGRIILFIDELHTVVGAGKTEGSMDAGN 295
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
+ KPMLARG+L CIGATT++EYR+++EKDAA ERRFQ V VAEP+V +T+SILRGL+E+Y
Sbjct: 296 MLKPMLARGELHCIGATTMDEYRQHIEKDAALERRFQPVIVAEPTVENTISILRGLRERY 355
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRIQD ALV AA LS RYI+ R LPDKAIDL+DEA A +R +++S PEE++NLER
Sbjct: 356 ELHHGVRIQDAALVSAATLSHRYISDRFLPDKAIDLIDEAAAKLRTEMESMPEELENLER 415
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+ MQLEIE AL KEKD+AS+ RL + KE+ +LR + + ++++EK I + +++
Sbjct: 416 RLMQLEIEREALRKEKDQASQERLNALEKEVAELRSERDTMRAQWEEEKSTIGGLGSIRE 475
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVGPDQI 537
+ E+ +++A+R YDL + A+ +YG I +E + + E SDE ++ E V P+++
Sbjct: 476 ELEKARHEMEQAQREYDLNKVAEYQYGRIPALEKKLKEAEERLGSDEAKLIKEDVTPEEV 535
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEVVSRWTGIP++RL + EKE+L IG EAVNAV ++V+R+R+GL P++
Sbjct: 536 AEVVSRWTGIPLSRLLEGEKEKLLRLDDILHERVIGQDEAVNAVTDAVIRARSGLKDPKR 595
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSF+FLGPTGVGKTELA+ALAE LFD E ++RIDMSEYME+H+V+RLIGAPPGYVG+
Sbjct: 596 PIGSFIFLGPTGVGKTELARALAESLFDSEENMIRIDMSEYMEKHTVARLIGAPPGYVGY 655
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
+EGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGRLTD GRTVDF+NT+IIM
Sbjct: 656 DEGGQLTEAVRRKPYSVLLFDEIEKAHYDVFNVLLQILDDGRLTDSHGRTVDFKNTIIIM 715
Query: 707 TSNLGAEHLL--SGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
TSNLG+ HLL +G G + V +D+V+ E+R HFRPE LNR+DEIV+F PL+ E+ ++
Sbjct: 716 TSNLGSMHLLENAGESGDIAESV-KDKVMAELRSHFRPEFLNRVDEIVLFKPLTLEETKQ 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ LQ++ + RLAER + L +T+AA + V YDP+YGARP++R+L+++V T L+R L
Sbjct: 775 IIDLQLELLYKRLAERYITLEMTEAAKEHVARAGYDPVYGARPLKRYLQRQVETVLARKL 834
Query: 825 VREEIDENSTVYIDASPKGDNLVYRV 850
+ EI ++S + +DA + L++R+
Sbjct: 835 IAGEIADHSHITVDADE--NQLIFRI 858
>gi|219125089|ref|XP_002182821.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405615|gb|EEC45557.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 887
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/893 (53%), Positives = 635/893 (71%), Gaps = 28/893 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ T T + I + +A G++Q PLHLAVAL + + A+ +N
Sbjct: 1 MSERTITDATAKVIEQSLSIARDNGNSQADPLHLAVALFTGDDSMGARVCTKVVADNVDV 60
Query: 61 SAERV-FNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ R + + + PSQTPAP E S++ +++RA A KA+GD +A+D LIL L E
Sbjct: 61 NVVRKNLQRRLLQKPSQTPAPHEASLSSSYSSLLQRATKASKANGDALVALDHLILALYE 120
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
D + D+ ++ + + V+ LRG KV SAS + T++AL+ YG DLV+QA GK
Sbjct: 121 DREAADVLTQSMLTKKLAQGAVKDLRG--SHKVTSASAEETYEALEKYGIDLVQQAEDGK 178
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPV+GRDEEIRR+++ILSRRTKNNPVL+GEPG GKT++VEGLA+RIV GDVP ++ V
Sbjct: 179 LDPVVGRDEEIRRLIQILSRRTKNNPVLVGEPGTGKTSIVEGLARRIVEGDVPESIKGVA 238
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L LDMGALVAGAKYRGEFEERL+AVL EV+ A+GK++LF+DEIHLVLGAG+++G+MDAA
Sbjct: 239 LRTLDMGALVAGAKYRGEFEERLRAVLDEVKRAQGKMLLFVDEIHLVLGAGKSDGAMDAA 298
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KPMLARG+LR IGATTLEEYRK++EKDAAFERRFQQV V EPSV DT+S+LRGL ++
Sbjct: 299 NLLKPMLARGELRMIGATTLEEYRKHIEKDAAFERRFQQVIVNEPSVLDTISMLRGLSDR 358
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AAQLS RYIT R PDK+IDL+DEA A R LDS+PE ID LE
Sbjct: 359 YETHHGVRIMDSALVTAAQLSDRYITHRFNPDKSIDLIDEAAARKRTTLDSRPERIDQLE 418
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QLEIE AL +EKDK SK R +++E+ +L+++L PL +++ ++ R +E++ +K
Sbjct: 419 RQILQLEIESTALGREKDKESKRRRTAIQEEIANLKEELAPLNAKWQADRGRAEELKEIK 478
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE-------GNQSDENLMLTE 530
+K L AER D +AADL+YGAI ++++ + ++E + SDE+ +++E
Sbjct: 479 EKLTTLEAKAASAERTGDYEKAADLKYGAIPDLKSHLKRIEESEMIRKADASDEDSLVSE 538
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRA 579
TV P IAEV+SRWTGIPVTRL Q + KER+IG +A+ V + +LRS+A
Sbjct: 539 TVTPQDIAEVISRWTGIPVTRLSQTDRDRLLKLDDRLKERVIGQDQAIKEVTDCILRSKA 598
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFD-DENLLVRIDMSEYMEQHSVSRLIG 638
GL RP QP GSFLFLGPTGVGKTELAK+L LFD DE L+RIDMSEY EQHSV+RLIG
Sbjct: 599 GLSRPSQPIGSFLFLGPTGVGKTELAKSLYSSLFDADERHLIRIDMSEYTEQHSVARLIG 658
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGY+GH+EGGQLTEAVRRRPYSVVLFDE+EKAH V +LQ+LD+GRLTD +GRTVD
Sbjct: 659 APPGYIGHDEGGQLTEAVRRRPYSVVLFDEMEKAHPRVLTLMLQILDEGRLTDSKGRTVD 718
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F NTVII+TSN+GA++LL+ ++A QV+ EV+ F PE LNRL I++F+ L
Sbjct: 719 FTNTVIILTSNVGAKYLLNLTEESKRRELAHKQVMSEVQSRFAPEFLNRLSGIIMFNSLG 778
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
+QL + + M+ V+ RLA +GV + + + +LA SYDP YGARP+ R+LE VVT
Sbjct: 779 TQQLEMIVQKSMRGVSKRLASQGVRVVLESSGAKAILAASYDPNYGARPVERYLESTVVT 838
Query: 819 ELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQI 871
LSRML+ +I S V I+A+ +GD+ K+ +V++ +S VL+++
Sbjct: 839 TLSRMLISGDISSGSIVRIEAA-EGDD---ESHKSSRWVESPIPERSPVLLRL 887
>gi|397571754|gb|EJK47942.1| chaperone CLPB [Thalassiosira oceanica]
Length = 924
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/874 (54%), Positives = 623/874 (71%), Gaps = 38/874 (4%)
Query: 1 MNPDK-FTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAI--NNAGGEN 57
M+ D+ T T +A+ A +A GH+Q P+HLA AL ++ GI ++ + ++AG
Sbjct: 1 MSADRTMTDATTKALQEALVIARDNGHSQAEPIHLASALFAEDDGIGSRVVARSDAGCGP 60
Query: 58 AAQSAERVFNQ----AMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQL 113
++ R+ Q AM P+Q P P E S++L KVI+RA A K++ D+ +A+D L
Sbjct: 61 SSIIDVRLVRQGLSRAMLTRPAQNPPPHEASMSSSLQKVIQRAMALAKSNADSLVALDHL 120
Query: 114 ILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE 173
++ + +D D+ + AG+ V+ V+ +RGK RK+ S S + TF+AL+ YG DLV+
Sbjct: 121 LVAIYDDRSTKDVLESAGLTKKVVEKTVQSIRGK--RKITSTSAEETFEALEKYGIDLVK 178
Query: 174 QA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPS 231
+A GKLDPVIGRD+EIRRV++IL RRTKNNP L+GEPGVGKTA+VEGLA+RI+ GDVP
Sbjct: 179 EAEDGKLDPVIGRDDEIRRVIQILCRRTKNNPCLVGEPGVGKTAIVEGLARRILDGDVPV 238
Query: 232 NLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTE 291
L V L LDMGALVAGAKYRGEFEERL+AVL EV++AEG +ILF+DE+HLVLGAG+ +
Sbjct: 239 TLQGVSLRTLDMGALVAGAKYRGEFEERLRAVLDEVKQAEGNIILFVDEVHLVLGAGKAD 298
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
G+MDAANL KPMLARG+LR IGATTLEEYR+++EKD+AFERRFQ+V EPSV TVSIL
Sbjct: 299 GAMDAANLLKPMLARGELRMIGATTLEEYRQHIEKDSAFERRFQKVLANEPSVESTVSIL 358
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RGL ++YE HHGVRI D A+ AAQLS RYIT R LPDKAIDLVDEA A VRVQLDS+PE
Sbjct: 359 RGLVDRYEAHHGVRISDAAICAAAQLSDRYITNRFLPDKAIDLVDEAAAQVRVQLDSRPE 418
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
+ID LERK +QLEIE AL +EKDKASK R EV E+ +LR++L+PL ++++++ R +
Sbjct: 419 KIDVLERKVVQLEIESTALSREKDKASKKRRKEVHDEIANLREELEPLNQKWEEDRGRAE 478
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI--------------GQL 517
E++ K+K L + AER D +AADL+YGAI +++A I +
Sbjct: 479 ELKNAKEKLTRLEAKVASAERVGDYEKAADLKYGAIPDLKAHIETIVREEEKRKADQAEK 538
Query: 518 EGNQSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEA 566
G DE+ + E V P IA+++SRWTGIP +L Q E KER++G EA
Sbjct: 539 MGGCEDEDSLALEVVLPKHIADIISRWTGIPANKLTQTERERILKLGDRLKERVVGQEEA 598
Query: 567 VNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFD-DENLLVRIDMS 625
V AV +S++RS+AGL R QP SFLFLGPTG GKTELAKAL +L+D DE LVRIDMS
Sbjct: 599 VGAVVDSIMRSKAGLARASQPDSSFLFLGPTGTGKTELAKALFSELYDGDERSLVRIDMS 658
Query: 626 EYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLD 685
EY E+HSVSRLIG+PPGY+GHEEGGQLTEAVRR+PY+VVLFDEVEKAH + LLQVLD
Sbjct: 659 EYTEEHSVSRLIGSPPGYIGHEEGGQLTEAVRRKPYTVVLFDEVEKAHKKILTVLLQVLD 718
Query: 686 DGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLS-GMMGKVTMQVARDQVLQEVRKHFRPEL 744
+GRLTD +GRTVDF NTVII+TSNLGA+ LL +++ +AR V+ V+ HF PE
Sbjct: 719 EGRLTDSRGRTVDFTNTVIILTSNLGAQFLLDYDKTSEISRDLARKSVMSAVKSHFSPEF 778
Query: 745 LNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYG 804
LNRL +V+F+ L +QL K+ + + V RL E+G+ + + + + ++ S+DP YG
Sbjct: 779 LNRLSSVVMFNSLGADQLGKICQKSLCSVKRRLVEQGIRVVLEKSGAEAIIDNSFDPSYG 838
Query: 805 ARPIRRWLEKKVVTELSRMLVREEIDENSTVYID 838
ARP+ R+LE+ +VT+LS+ML+ E++ TV+I+
Sbjct: 839 ARPVERYLEQTIVTKLSKMLISGELESGYTVFIE 872
>gi|167539748|ref|XP_001741332.1| heat shock protein [Entamoeba dispar SAW760]
gi|165894033|gb|EDR22117.1| heat shock protein, putative [Entamoeba dispar SAW760]
Length = 866
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/864 (54%), Positives = 629/864 (72%), Gaps = 37/864 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+K+T T + + E+A +A P+H+ A++ + S I + + GG+
Sbjct: 1 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGD--VN 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ + M K+ Q P P +I T +V+RRA QK GD++LA+D +++ L+E+
Sbjct: 59 KLRKEIKETMNKIAVQNPPPVDIGLHPTTQQVLRRAIEKQKIMGDSYLAIDVIVMSLMEE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+I + +G+ V ++ ++R +G+ VE+ ++ ++ALK YG DL QA GK+
Sbjct: 119 KEISTIVGNSGINVKEFNKKITEMR--KGQSVETKEAESQYEALKKYGNDLTAQAESGKM 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DP+IGRDEEI+RV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVPSNL R+
Sbjct: 177 DPIIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNL-QCRV 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAA 297
I LDMGAL+AGA+YRG+FEERLKAV+KEV+E++ +ILFIDEIH VLGAG T EG+MDAA
Sbjct: 236 IGLDMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAA 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPML+RG+LRCIGATT+EEYRKYVEKD AFERRFQQVYV EPS DT+ ILRG++EK
Sbjct: 296 NILKPMLSRGELRCIGATTIEEYRKYVEKDPAFERRFQQVYVNEPSEEDTLYILRGIREK 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE H+G+ I D ALV AA LS RYI GR LPDKAIDLVDEACA + Q +SQPEEID LE
Sbjct: 356 YENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDKLE 415
Query: 418 RKRMQLEIELHALE---KEKD----KASKARLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
R+ QL +E ALE KE D K K RL ++ KEL + ++KL L + Y+KEK
Sbjct: 416 RRETQLNVEKIALERDIKESDEDHNKMIKERLQDIEKELSENKEKLTKLRINYEKEKGGS 475
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTE 530
+E++ L K E + +AE DL AADL+Y AI E E + +L+ Q+ E M++
Sbjct: 476 EEMKELATKIEAMK---HKAESTKDLEVAADLKYYAIPEAEKRMKELK-EQNKETTMISL 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRA 579
V P QI EVVSRWTGIPVT++ Q EK +R+IG EAV AV+++++RSR
Sbjct: 532 QVTPTQIEEVVSRWTGIPVTKMNQTEKIRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRG 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GLG ++PTGSF+FLGP+GVGKTELAKALA +LFDDE +VRIDMSEYME HSVSRLIGA
Sbjct: 592 GLGNEKRPTGSFMFLGPSGVGKTELAKALAVELFDDEQNIVRIDMSEYMESHSVSRLIGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEA+RR+PYSV+LFDE+EKAH VFN LLQ+LD+GRLTDG+GRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NT++IMTSNLG+E ++ G+ G+V+ +V ++ V++ V+K F+PE LNRLD+I+VF PL
Sbjct: 712 KNTIVIMTSNLGSEIIMKGVETEGQVSRKV-KETVMEIVKKTFKPEFLNRLDDIIVFSPL 770
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALA---VTDAALDIVLAESYDPIYGARPIRRWLEK 814
S ++L+++ +LQM +V I++ ++ L+ +T++A++ ++ Y YGARP+RR++EK
Sbjct: 771 SEKELKEIVKLQMGEV-IKMIKKRYPLSEVEMTESAIEGIIKSGYSIAYGARPMRRYIEK 829
Query: 815 KVVTELSRMLVREEIDENSTVYID 838
VVT +++ ++ + E + + ID
Sbjct: 830 TVVTSITKSIISGMMKEKNKIQID 853
>gi|389593915|ref|XP_003722206.1| putative serine peptidase [Leishmania major strain Friedlin]
gi|321438704|emb|CBZ12464.1| putative serine peptidase [Leishmania major strain Friedlin]
Length = 867
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/865 (53%), Positives = 617/865 (71%), Gaps = 20/865 (2%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
++T ++ +A LA + P+HLA + D + + ++ + G A S +
Sbjct: 7 EWTQAASDLMARMAALARKKANGYLDPVHLAYVMFEDENSLASRVVRKLG----AASVKD 62
Query: 65 VFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG 124
+ +P+Q PAP + ++ +++V+ A+ + A GDT +A D +L L E ++G
Sbjct: 63 GLEARVDAIPTQMPAPTQPRPNSDMMRVMNTAEQERAALGDTLMAADHFLLALHESKEVG 122
Query: 125 DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVI 182
+ AG +++ + ++R +G+K+ S D +++L Y DL +QA GKLDPVI
Sbjct: 123 RILDAAGAGKKAIRATLLEMR--KGKKITSDFQDDNYESLNKYAVDLCKQAEDGKLDPVI 180
Query: 183 GRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALD 242
GR +EI R +R+LSRRTKNNPVLIGEPGVGKTA+VEG+AQ++VRGDVP L+ +R+ +LD
Sbjct: 181 GRADEILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLD 240
Query: 243 MGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKP 302
MGAL+AGAKYRGEFEERLKAVL EV+E++ K+ILFIDEIHLVLGAG+++G+MDAANL KP
Sbjct: 241 MGALIAGAKYRGEFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKSDGAMDAANLLKP 300
Query: 303 MLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHH 362
+LARG+LR IGATTLEEYR+YVEKDAAFERRF V V EPSV + SILRGLK++YE HH
Sbjct: 301 LLARGELRTIGATTLEEYRQYVEKDAAFERRFMPVQVHEPSVEECTSILRGLKDRYEQHH 360
Query: 363 GVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQ 422
GV+I D+A+VVAAQL+ RYIT R LPDKAIDL+DEACANVRV L S+P EID LERK+ Q
Sbjct: 361 GVQITDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQ 420
Query: 423 LEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREE 482
LEIE AL+++KD ++K RL V+ E+ + +KL PL+ +Y++E+ RIDE++ + K +E
Sbjct: 421 LEIEERALQRDKDASAKERLKAVKAEIQKVEEKLGPLLAKYEQERGRIDELQATQAKLDE 480
Query: 483 LLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL-EGNQSDENLMLTETVGPDQIAEVV 541
L+ AER D+ AADL+Y I ++ I L E + + ML TV IA VV
Sbjct: 481 KKVKLERAERMRDMETAADLKYNVIPILQDRIRSLKEAIEKQKATMLQGTVTETDIATVV 540
Query: 542 SRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPTGS 590
SRWT IPVT+L Q E+ERL+ LA EAV+ VAE++LRSRAGL R +PTGS
Sbjct: 541 SRWTNIPVTKLSQTERERLLHLADQLHLRVKGQDEAVSRVAEAILRSRAGLARSDRPTGS 600
Query: 591 FLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGG 650
FLFLGPTGVGKTEL+KA+A +LFDD +VR+DMSEYMEQHSV+RLIGAPPGYVGHEEGG
Sbjct: 601 FLFLGPTGVGKTELSKAVASELFDDAKYMVRLDMSEYMEQHSVARLIGAPPGYVGHEEGG 660
Query: 651 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL 710
QLTE VRRRPY+VVL DEVEKAH +VFN LLQVLDDGRLTD GRTVDF NT+IIMTSNL
Sbjct: 661 QLTEPVRRRPYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVDFCNTIIIMTSNL 720
Query: 711 GAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQM 770
GA++L + +VA+ QV+ EVRK FRPE +NRLD+I++F L +++ + L
Sbjct: 721 GAQYLQNMDTSPKAYEVAQAQVMGEVRKFFRPEFINRLDDIILFRSLGLKEMTGIIDLIT 780
Query: 771 KDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEID 830
+++ RL ++ + +++T+ A VL ++D GARP+RRW+EK + TELSRM++ +E+
Sbjct: 781 EELNGRLKDQSIRVSLTEEAKQYVLESAFDADMGARPLRRWVEKNITTELSRMIISQELS 840
Query: 831 ENSTVYIDASPKGDNLVYRVQKNGG 855
NSTV + S L + V++
Sbjct: 841 PNSTVKVTLSSNHKKLSFSVKRTAA 865
>gi|146093083|ref|XP_001466653.1| ATP-dependent Clp protease subunit, heat shock protein 100 (HSP100)
[Leishmania infantum JPCM5]
gi|398018777|ref|XP_003862553.1| ATP-dependent Clp protease subunit, heat shock protein 100
(HSP100), putative [Leishmania donovani]
gi|134071016|emb|CAM69695.1| ATP-dependent Clp protease subunit, heat shock protein 100 (HSP100)
[Leishmania infantum JPCM5]
gi|322500783|emb|CBZ35860.1| ATP-dependent Clp protease subunit, heat shock protein 100
(HSP100), putative [Leishmania donovani]
Length = 867
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/865 (53%), Positives = 618/865 (71%), Gaps = 20/865 (2%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
++T ++ +A LA + P+HLA + D + + ++ + G A S +
Sbjct: 7 EWTQAASDLMARTAALARKKANGYLDPVHLAYVMFEDENSLASRVVRKLG----AASVKD 62
Query: 65 VFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG 124
+ +P+Q PAP + ++ +++V+ A+ + A GDT +A D +L L E ++G
Sbjct: 63 GLEARVDAIPTQMPAPTQPRPNSDMMRVMNTAEQERVALGDTLMAADHFLLALHESKEVG 122
Query: 125 DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVI 182
+ AG +++ + ++R +G+K+ S D +++L Y DL +QA GKLDPVI
Sbjct: 123 RILDAAGAGKKAIRATLLEMR--KGKKINSDFQDDNYESLNKYAVDLCKQAEDGKLDPVI 180
Query: 183 GRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALD 242
GR +EI R +R+LSRRTKNNPVLIGEPGVGKTA+VEG+AQ++VRGDVP L+ +R+ +LD
Sbjct: 181 GRADEILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLD 240
Query: 243 MGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKP 302
MGAL+AGAKYRGEFEERLKAVL EV+E++ K+ILFIDEIHLVLGAG+++G+MDAANL KP
Sbjct: 241 MGALIAGAKYRGEFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKSDGAMDAANLLKP 300
Query: 303 MLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHH 362
+LARG+LR IGATTLEEYR+YVEKDAAFERRF V V EPSV + SILRGLK++YE HH
Sbjct: 301 LLARGELRTIGATTLEEYRQYVEKDAAFERRFMPVQVNEPSVEECTSILRGLKDRYEQHH 360
Query: 363 GVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQ 422
GV+I D+A+VVAAQL+ RYIT R LPDKAIDL+DEACANVRV L S+P EID LERK+ Q
Sbjct: 361 GVQITDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQ 420
Query: 423 LEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREE 482
LEIE AL+++KD ++K RL V+ E+ + +KL PL+ +Y++E+ RIDE++ + K +E
Sbjct: 421 LEIEEKALQRDKDASAKERLKAVKAEIQKVEEKLGPLLAKYEQERGRIDELQATQAKLDE 480
Query: 483 LLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL-EGNQSDENLMLTETVGPDQIAEVV 541
L+ AER D+ AADL+Y I ++ I L E + + ML TV IA VV
Sbjct: 481 KKVKLERAERMRDMETAADLKYNVIPILQDRIRSLKEEIEKQKATMLQGTVTETDIATVV 540
Query: 542 SRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPTGS 590
SRWT IPVT+L Q E+ERL+ LA EAV+ VAE++LRSRAGL R +PTGS
Sbjct: 541 SRWTNIPVTKLSQTERERLLHLADQLHLRVKGQDEAVSRVAEAILRSRAGLARSDRPTGS 600
Query: 591 FLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGG 650
FLFLGPTGVGKTEL+KA+A +LFDD +VR+DMSEYMEQHSV+RLIGAPPGYVGHEEGG
Sbjct: 601 FLFLGPTGVGKTELSKAVASELFDDAKYMVRLDMSEYMEQHSVARLIGAPPGYVGHEEGG 660
Query: 651 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL 710
QLTE VRRRPY+VVL DEVEKAH +VFN LLQVLDDGRLTD GRTV+F NT+IIMTSNL
Sbjct: 661 QLTEPVRRRPYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVNFCNTIIIMTSNL 720
Query: 711 GAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQM 770
GA++L + +VA+ QV+ EVRK FRPE +NRLD+I++F L +++ + L
Sbjct: 721 GAQYLQNMDTSPKAYEVAQTQVMGEVRKFFRPEFINRLDDIILFRSLGLKEMTGIIDLIT 780
Query: 771 KDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEID 830
+++ RL ++ + +++T+ A + VL ++D GARP+RRW+EK + TELSRM++ +E+
Sbjct: 781 EELNGRLKDQSIRVSLTEEAKNYVLESAFDADMGARPLRRWVEKNITTELSRMIISQELS 840
Query: 831 ENSTVYIDASPKGDNLVYRVQKNGG 855
NSTV + S L + V++
Sbjct: 841 PNSTVKVTLSSNHKKLSFSVKRTAA 865
>gi|212702504|ref|ZP_03310632.1| hypothetical protein DESPIG_00521 [Desulfovibrio piger ATCC 29098]
gi|212674165|gb|EEB34648.1| ATP-dependent chaperone protein ClpB [Desulfovibrio piger ATCC
29098]
Length = 866
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/859 (55%), Positives = 615/859 (71%), Gaps = 25/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K EA+ A +A GH HLA+AL+ GI + + G + AA
Sbjct: 1 MDINKFTEKAREAVTQAQSIAVGMGHQDIDSEHLALALIRQEQGIVPRILEQMGVQTAAL 60
Query: 61 SAERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ + ++K PS + P+ I + L KV+ A+ + D +++VD L L
Sbjct: 61 AV--AVEEKLRKRPSVSGGGMDPNRISITQRLAKVLGDAENESRRMKDEYVSVDHLFAAL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ + +G++FKE ++ A +E LRG G +V S + + T +AL Y RDLVE
Sbjct: 119 AENAPGTPLGEVFKEYNISRASFGQAMESLRG--GARVTSPTPEDTVEALSKYARDLVEA 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GK+DPVIGRD EIRRVVRILSRRTKNNPVLIGE GVGKTA+VEGLA RIV+GDVP
Sbjct: 177 ARQGKMDPVIGRDAEIRRVVRILSRRTKNNPVLIGEAGVGKTAIVEGLAFRIVKGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L +L ALDMGAL+AGAKYRGEFEERLKAVL EVE++EGK+ILFIDE+H ++GAG+TEG
Sbjct: 237 LRGHKLYALDMGALIAGAKYRGEFEERLKAVLNEVEKSEGKIILFIDELHTIVGAGKTEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA NL KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EP+V D +SILR
Sbjct: 297 SMDAGNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVDEPTVEDAISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHGVRI D A+V A LS RYIT R LPDKAIDL+DEA A +R ++DS P +
Sbjct: 357 GLKERFEVHHGVRISDSAIVEAVTLSHRYITDRQLPDKAIDLIDEAAALIRTEIDSLPSD 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK MQLEIE AL +E D AS+ RL ++ EL +LR + L +++KEK ID
Sbjct: 417 LDEVNRKVMQLEIEREALRRETDAASRDRLEKLESELGELRVQQGELRQQWEKEKNAIDS 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN-LMLTET 531
+R +K+K E+ A+++AER YDL +AA+L+Y + +E + + +L E
Sbjct: 477 VRGIKEKIEQTKLAIEQAERAYDLNKAAELKYSTLLALEKQLADASAAAGADGPRLLKEE 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAG 580
V PD +AE+V++WTGIPVTRL ++E+E+L+ LA EAV AVA++VLR+RAG
Sbjct: 537 VRPDDVAEIVAKWTGIPVTRLMESEREKLLHLADQLHKRVVGQDEAVQAVADAVLRARAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +PTGSF+FLGPTGVGKTEL K LAE LFD E+ +VR+DMSEYME+HSVSRLIGAP
Sbjct: 597 LSDPSRPTGSFIFLGPTGVGKTELCKTLAEALFDTEDNMVRLDMSEYMEKHSVSRLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQ+LDDGRLTD QGRTVDFR
Sbjct: 657 PGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNTLLQLLDDGRLTDSQGRTVDFR 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
N ++IMTSN+G+ HLL G+ ++ + ARD V++E+R+HFRPE LNR+DE V+F PL
Sbjct: 717 NCIVIMTSNIGSPHLLDGIGEDGSLKEGARDAVMEELRRHFRPEFLNRVDETVLFLPLRR 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
+Q+ ++ LQM + RL ER + L +TDAA + + E+YDP+YGARP++R++++ V T
Sbjct: 777 DQVTRIVDLQMDRLRKRLEERKITLDITDAAREFIAGEAYDPVYGARPLKRYVQQYVETP 836
Query: 820 LSRMLVREEIDENSTVYID 838
L+R LV I + V ID
Sbjct: 837 LARELVSGRILDGQAVRID 855
>gi|2058336|emb|CAB08073.1| heat shock protein 100 [Leishmania donovani]
Length = 867
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/865 (53%), Positives = 617/865 (71%), Gaps = 20/865 (2%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
++T ++ +A LA + P+HLA + D + + ++ + G A S +
Sbjct: 7 EWTQAASDLMARTAALARKKANGYLDPVHLAYVMFEDENSLASRVVRKLG----AASVKD 62
Query: 65 VFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG 124
+ +P+Q PAP + ++ +++V+ A+ + A GDT +A D +L L E ++G
Sbjct: 63 GLEARVDAIPTQMPAPTQPRPNSDMMRVMNTAEQERVALGDTLMAADHFLLALHESKEVG 122
Query: 125 DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVI 182
+ AG +++ + ++R +G+K+ S D +++L Y DL +QA GKLDPVI
Sbjct: 123 RILDAAGAGKKAIRATLLEMR--KGKKINSDFQDDNYESLNKYAVDLCKQAEDGKLDPVI 180
Query: 183 GRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALD 242
GR +EI R +R+LSRRTKNNPVLIGEPGVGKTA+VEG+AQ++VRGDVP L+ +R+ +LD
Sbjct: 181 GRADEILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLD 240
Query: 243 MGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKP 302
MGAL+AGAKYRGEFEERLKAVL EV+E++ K+ILFIDEIHLVLGAG+++G+MDAANL KP
Sbjct: 241 MGALIAGAKYRGEFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKSDGAMDAANLLKP 300
Query: 303 MLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHH 362
+LARG+LR IGATTLEEYR+YVEKDAAFERRF V V EPSV + SILRGLK++YE HH
Sbjct: 301 LLARGELRTIGATTLEEYRQYVEKDAAFERRFMPVQVNEPSVEECTSILRGLKDRYEQHH 360
Query: 363 GVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQ 422
GV+I D+A+VVAAQL+ RYIT R LPDKAIDL+DEACANVRV L S+P EID LERK+ Q
Sbjct: 361 GVQITDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQ 420
Query: 423 LEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREE 482
LEIE AL+++KD ++K RL V+ E+ + +KL PL+ +Y++E+ RIDE++ + K +E
Sbjct: 421 LEIEEKALQRDKDASAKERLKAVKAEIQKVEEKLGPLLAKYEQERGRIDELQATQAKLDE 480
Query: 483 LLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL-EGNQSDENLMLTETVGPDQIAEVV 541
L+ AER D+ AADL+Y I ++ I L E + + ML TV IA VV
Sbjct: 481 KKVKLERAERMRDMETAADLKYNVIPILQDRIRSLKEEIEKQKATMLHGTVTETDIATVV 540
Query: 542 SRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPTGS 590
SRWT IPVT+L Q E+ERL+ LA EAV+ VAE++LRSRAGL R +PTGS
Sbjct: 541 SRWTNIPVTKLSQTERERLLHLADQLHLRVKGQDEAVSRVAEAILRSRAGLARSDRPTGS 600
Query: 591 FLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGG 650
FLFLGPTGVGKTEL+KA+A +LFDD +VR+DMSEYMEQHSV+RLIGAPPGYVGHEEGG
Sbjct: 601 FLFLGPTGVGKTELSKAVASKLFDDAKYMVRLDMSEYMEQHSVARLIGAPPGYVGHEEGG 660
Query: 651 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL 710
QLTE VRRRPY+VVL DEVEKAH +VFN LLQVLDDGRLTD GRTV+F T+IIMTSNL
Sbjct: 661 QLTEPVRRRPYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVNFCYTIIIMTSNL 720
Query: 711 GAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQM 770
GA++L + +VA+ QV+ EVRK FRPE +NRLD+I++F L +++ + L
Sbjct: 721 GAQYLQNMDTSPKAYEVAQTQVMGEVRKFFRPEFINRLDDIILFRSLGLKEMTGIIDLIT 780
Query: 771 KDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEID 830
+++ RL ++ + +++T+ A + VL ++D GARP+RRW+EK + TELSRM++ +E+
Sbjct: 781 EELYGRLKDQSIRVSLTEEAKNYVLESAFDADMGARPLRRWVEKNITTELSRMIISQELS 840
Query: 831 ENSTVYIDASPKGDNLVYRVQKNGG 855
NSTV + S L + V++
Sbjct: 841 PNSTVKVTLSSNHKKLSFSVKRTAA 865
>gi|401415870|ref|XP_003872430.1| putative ATP-dependent Clp protease subunit, heat shock protein 100
(HSP100) [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488654|emb|CBZ23901.1| putative ATP-dependent Clp protease subunit, heat shock protein 100
(HSP100) [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 865
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/865 (53%), Positives = 615/865 (71%), Gaps = 20/865 (2%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
++T ++ +A LA + P+HLA + D + + ++ + G A S +
Sbjct: 7 EWTQAASDLMARTAALARKKANGYLDPVHLAYVMFEDENSLASRVVRKLG----AASVKD 62
Query: 65 VFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG 124
+ +P+Q PAP + ++ +++V+ A+ + A GDT +A D +L L E ++G
Sbjct: 63 GLEARVDAIPTQMPAPTQPRPNSDMMRVMNTAEQERVALGDTLMAADHFLLALHESKEVG 122
Query: 125 DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVI 182
+ AG +++ + ++R +G+K+ S D +++L Y DL +QA GKLDPVI
Sbjct: 123 RILDAAGAGKKAIRTTLLEMR--KGKKITSDFQDDNYESLNKYAVDLCKQAEDGKLDPVI 180
Query: 183 GRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALD 242
GR +EI R +R+LSRRTKNNPVLIGEPGVGKTA+VEG+AQ++VRGDVP L+ +R+ +LD
Sbjct: 181 GRADEILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLD 240
Query: 243 MGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKP 302
MGAL+AGAKYRGEFEERLKAVL EV+E+ +ILFIDEIHLVLGAG+++G+MDAANL KP
Sbjct: 241 MGALIAGAKYRGEFEERLKAVLNEVKESNNTIILFIDEIHLVLGAGKSDGAMDAANLLKP 300
Query: 303 MLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHH 362
+LARG+LR IGATTLEEYR+YVEKDAAFERRF V V EPSV + +SILRGLK++YE HH
Sbjct: 301 LLARGELRTIGATTLEEYRQYVEKDAAFERRFMPVQVNEPSVEECMSILRGLKDRYEQHH 360
Query: 363 GVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQ 422
GV+I D+A+VVAAQL+ RYIT R LPDKAIDL+DEACANVRV L S+P EID LERK+ Q
Sbjct: 361 GVQITDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQ 420
Query: 423 LEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREE 482
LEIE AL+++KD + K RL V+ E+ +KL PL+ +Y++E+ RIDE++ + K +E
Sbjct: 421 LEIEEKALQRDKDPSVKERLKAVKAEIQKAEEKLGPLLAKYEQERGRIDELQATQAKLDE 480
Query: 483 LLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL-EGNQSDENLMLTETVGPDQIAEVV 541
L+ AER D+ AADL+Y I ++ I L E + + ML TV IA VV
Sbjct: 481 KKVKLERAERMRDMETAADLKYNVIPIIQDRIRSLKEEIEKQKTTMLQGTVTETDIATVV 540
Query: 542 SRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPTGS 590
SRWT IPVT+L Q E+ERL+ LA EAVN VAE++LRSRAGL R +PTGS
Sbjct: 541 SRWTNIPVTKLSQTERERLLHLADQLHLRVKGQDEAVNRVAEAILRSRAGLSRSDRPTGS 600
Query: 591 FLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGG 650
FLFLGPTGVGKTEL+KA+A +LFDD +VR+DMSEYMEQHSV+RLIGAPPGYVGHEEGG
Sbjct: 601 FLFLGPTGVGKTELSKAVATELFDDAKYMVRLDMSEYMEQHSVARLIGAPPGYVGHEEGG 660
Query: 651 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL 710
QLTE VRRR Y+VVL DEVEKAH +VFN LLQVLDDGRLTD GRTV+F NT+IIMTSNL
Sbjct: 661 QLTEPVRRRAYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVNFCNTIIIMTSNL 720
Query: 711 GAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQM 770
GA++L + +VA+ QV+ EVRK FRPE +NRLD+I++F L +++ + L +
Sbjct: 721 GAQYLQNMDTSPKAYEVAQAQVMGEVRKFFRPEFINRLDDIILFRSLGSKEMMGIIDLIV 780
Query: 771 KDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEID 830
+++ RL ++ + +++T+ A VL ++D GARP+RRW+EK + TELSRM++ +E+
Sbjct: 781 EELNGRLKDQSIRVSLTEEAKHYVLESAFDADMGARPLRRWVEKNITTELSRMIISQELS 840
Query: 831 ENSTVYIDASPKGDNLVYRVQKNGG 855
NSTV + S L + V++ G
Sbjct: 841 PNSTVKVTLSSNHKKLSFSVKRTAG 865
>gi|332707255|ref|ZP_08427308.1| ATP-dependent chaperone ClpB [Moorea producens 3L]
gi|332353989|gb|EGJ33476.1| ATP-dependent chaperone ClpB [Moorea producens 3L]
Length = 875
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/857 (52%), Positives = 625/857 (72%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA ++A +A Q HL A+L D G+ +N A E + Q
Sbjct: 5 NPNQFTEKAWEAIAQTQDVAKAARQQQIETEHLMKAML-DQDGLATSILNKA--EVSVQR 61
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+KK P + D + ++ ++ RA++ +K + D +++++ LILG L+D
Sbjct: 62 VREATESFIKKQPKVSGNSDSVYLGRSMNSLLDRAESYRKEYQDDYISIEHLILGYLKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E + R+K + +RG + KV + + +QAL+ YGRDL E A GKL
Sbjct: 122 RFGKSLFQEFKLDENRLKLTIADIRGNQ--KVTDQNPEGKYQALEKYGRDLTEAAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVL+GEPGVGKTA+ EGLAQRI+ GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLMGEPGVGKTAIAEGLAQRIIAGDVPQSLKDRQL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKEV +++GK+ILFIDEIH V+GAG ++G+MDA N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEVTDSQGKIILFIDEIHTVVGAGASQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML+RG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLKE+Y
Sbjct: 300 LLKPMLSRGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVADTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDL+DEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADSALVAAATLSTRYISDRFLPDKAIDLMDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS RL + KEL DL+++ + L +++ EK+ ID I+ +K+
Sbjct: 420 KIIQLEMERLSLQKETDLASIERLERLEKELADLKEEQRTLNAQWQSEKDVIDRIQGIKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA L+YG + E++ ++ QL NQ+ +L E V
Sbjct: 480 EIDRVNVEIQQAERDYDLNRAAKLKYGKLAELQKSLAAVEQQLAENQTSSKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L +++ +R+IG EAV AVA+++ RSRAGL
Sbjct: 540 ADIAEIISKWTGIPISKLVESQKEKLLHLEEELHKRVIGQEEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDMSEYMEKHTVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QG TVDF+N+V
Sbjct: 660 VGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDAQGHTVDFKNSV 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + R +V++ +R FRPE LNR+DE+++F L QLR
Sbjct: 720 IIMTSNIGSQYILDVAGDDSKYEEMRSRVMEAMRSSFRPEFLNRIDEVIIFHTLQKHQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ + RLAER ++L ++DAALD + YDP++GARP++R +++++ T L++
Sbjct: 780 NIVQLQTLRLEQRLAERKMSLKLSDAALDFLADLGYDPVFGARPLKRAIQRELETPLAKG 839
Query: 824 LVREEIDENSTVYIDAS 840
++R E ++ T+++D +
Sbjct: 840 ILRSEFNDGDTIFVDVN 856
>gi|154341052|ref|XP_001566479.1| putative serine peptidase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063802|emb|CAM39991.1| putative serine peptidase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 867
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/865 (53%), Positives = 613/865 (70%), Gaps = 20/865 (2%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
++T +E +A LA + P HLA + D + + ++ + +A S +
Sbjct: 7 EWTQAASELMARTVALARKKANGYLHPAHLAYTMFEDENSLASRVLRKL----SAASVKE 62
Query: 65 VFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG 124
+ +P+QTPAP + ++ +++V+ A+ + A GDT +A D +L L E ++G
Sbjct: 63 ALEARVDAIPTQTPAPAQPRPNSDMMRVLNTAEQERVALGDTLMAADHFLLSLHESKEVG 122
Query: 125 DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVI 182
+ AG +++ + ++R +G+KV S D +++L Y DL +QA GKLDPVI
Sbjct: 123 KILDAAGAGKKAIRATLLEMR--KGKKVTSDFQDENYESLNKYAIDLCKQAEDGKLDPVI 180
Query: 183 GRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALD 242
GR +EI R +R+LSRRTKNNPVLIGEPGVGKTA+VEG+AQ++VRGDVP L +R+ +LD
Sbjct: 181 GRADEILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLDGIRIFSLD 240
Query: 243 MGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKP 302
MGALVAGAKYRGEFEERLK+VL EV+E++ K+ILFIDEIHLVLGAG+++G+MDAANL KP
Sbjct: 241 MGALVAGAKYRGEFEERLKSVLSEVKESDRKIILFIDEIHLVLGAGKSDGAMDAANLLKP 300
Query: 303 MLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHH 362
+LARG+LR IGATTLEEYRKYVEKDAAFERRF V+V EPSV + SILRGLK++YE HH
Sbjct: 301 LLARGELRTIGATTLEEYRKYVEKDAAFERRFMPVHVNEPSVEECTSILRGLKDRYEQHH 360
Query: 363 GVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQ 422
GV+I D+A+VVAAQL+ RYIT R LPDKAIDL+DEACANVRV L S+P EID LERK+ Q
Sbjct: 361 GVQITDKAVVVAAQLADRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDVLERKKRQ 420
Query: 423 LEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREE 482
LEIE AL+++KD ++K RL V+ E+ + +KL PL+ +Y++E+ RIDE++ + K +E
Sbjct: 421 LEIEEKALQRDKDASAKERLSAVKAEIQKVVEKLSPLLHKYEQERARIDELQATQAKLDE 480
Query: 483 LLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL-EGNQSDENLMLTETVGPDQIAEVV 541
L+ AER D+ AADL+Y I ++ I L E + + ML TV IA VV
Sbjct: 481 KKVKLERAERMSDMETAADLKYNVIPILQDRIRSLKEAIEKQKATMLQGTVTETDIAGVV 540
Query: 542 SRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPTGS 590
SRWT IPVT+L Q ++ERL+ LA EAVN VAE++LRSRAGL R +PTGS
Sbjct: 541 SRWTNIPVTKLSQTDRERLLHLADQLHLRVKGQDEAVNRVAEAILRSRAGLARSDRPTGS 600
Query: 591 FLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGG 650
FLFLGPTGVGKTEL+KA+A +LFDD +VR+DMSEYMEQHSV+RLIGAPPGYVGHEEGG
Sbjct: 601 FLFLGPTGVGKTELSKAVAAELFDDAKYMVRLDMSEYMEQHSVARLIGAPPGYVGHEEGG 660
Query: 651 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL 710
QLTE VRRRPY+VVL DEVEKAH +VFN LLQVLDDGRLTD GRTVDF N +IIMTSNL
Sbjct: 661 QLTEPVRRRPYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVDFCNAIIIMTSNL 720
Query: 711 GAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQM 770
G++ L S + + QV+ EVRK FRPE +NRLD+I++F L ++L + + +
Sbjct: 721 GSQFLHSMGSSPKAYEATQAQVMGEVRKFFRPEFINRLDDIILFRSLGFDELTGIVDIII 780
Query: 771 KDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEID 830
+++ RL ++ + +++TD A VL ++D GARP+RRW+EK + TELSRM++ +E+
Sbjct: 781 EELNGRLKDQLIRVSLTDEAKHYVLESAFDAEMGARPLRRWVEKNITTELSRMIISQELS 840
Query: 831 ENSTVYIDASPKGDNLVYRVQKNGG 855
NSTV + L + V++
Sbjct: 841 PNSTVKVILGSHHKKLSFSVKRTAA 865
>gi|347731266|ref|ZP_08864365.1| ATP-dependent chaperone ClpB [Desulfovibrio sp. A2]
gi|347519973|gb|EGY27119.1| ATP-dependent chaperone ClpB [Desulfovibrio sp. A2]
Length = 862
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/857 (54%), Positives = 617/857 (71%), Gaps = 25/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ +AIA A A GH Q H A+AL+ G+ + + AG + A
Sbjct: 1 MDINKFTEKSQQAIAEAQSTAVRFGHQQVDVEHAALALVRQEQGLVPRLLERAGYKPDAF 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+A ++K P+ + A +I + L + + RAQ + D +++V+ LI
Sbjct: 61 AA--ALEATLQKRPAVSGPGAAQGQIYVTQRLNQALVRAQDFARRLKDEYVSVEHLICAF 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
LE+ + +G + +E G+ ++ + +E +RG ++V S + + T++AL+ YGRDLVE+
Sbjct: 119 LEEPPATDMGKVAREFGLTQDKLLAVLEDVRG--AQRVTSQNPEDTYEALQKYGRDLVEE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRRVVRILSRRTKNNPVLIGE GVGKTA+VEGLA RI++GDVP
Sbjct: 177 ARKGKLDPVIGRDAEIRRVVRILSRRTKNNPVLIGEAGVGKTAIVEGLAHRILKGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L + L ALDMGAL+AGAKYRGEFEERLKAVLKEVE+AEG++++FIDE+H ++GAG+++G
Sbjct: 237 LKNRSLFALDMGALIAGAKYRGEFEERLKAVLKEVEKAEGRIVMFIDELHTIVGAGKSDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EP+V DT+SILR
Sbjct: 297 AMDAGNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVVVDEPTVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGVRI D A+V A LS RYIT R LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLRERFEVHHGVRISDSAIVEAVTLSHRYITDRQLPDKAIDLIDEAAALIRTEIDSLPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK MQLEIE AL +E D AS+ RL + EL DLR L+ ++++EK ID
Sbjct: 417 LDEVNRKVMQLEIEREALRRETDAASRERLERLENELADLRASQATLLAQWEREKGSIDA 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETV 532
+R +K++ E A+ EAER YDL RAA+L+Y + E+E + E DEN +L E V
Sbjct: 477 VRHVKEEIERTRLAIDEAERNYDLNRAAELKYSKLLELERKLADAE-RGDDENRLLKEEV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
PD +AE+V+RWTGIPVTRL ++E+ ER+IG EAV AVAE+VLR+RAGL
Sbjct: 536 RPDDVAEIVARWTGIPVTRLLESEREKLLRLGDVLHERVIGQDEAVQAVAEAVLRARAGL 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTEL K LAE LFD E+ +VRIDMSEYME+H+V+RLIGAPP
Sbjct: 596 SDPGRPIGSFIFLGPTGVGKTELCKTLAESLFDSEDNIVRIDMSEYMEKHAVARLIGAPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQ+LDDGRLTD GRTVDF+N
Sbjct: 656 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNVLLQILDDGRLTDSHGRTVDFKN 715
Query: 702 TVIIMTSNLGAEHLLSGMM-GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
T+IIMTSN+G+ HLL G+ G RD+V+ E+R+HFRPE LNR+DEIV+F PL E
Sbjct: 716 TIIIMTSNIGSAHLLEGITEGGEFRPGVRDRVMDEMRRHFRPEFLNRVDEIVMFRPLLPE 775
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q+ ++ L + + RLA+R + + ++DAA D + +YDP+YGARP+RR+L+ V T L
Sbjct: 776 QIARIVELLLGKLRARLADRKITVDLSDAARDFIAESAYDPVYGARPLRRYLQTNVETPL 835
Query: 821 SRMLVREEIDENSTVYI 837
+R L+ ++ + V I
Sbjct: 836 ARRLISGDLKDGQHVVI 852
>gi|354566494|ref|ZP_08985666.1| ATP-dependent chaperone ClpB [Fischerella sp. JSC-11]
gi|353545510|gb|EHC14961.1| ATP-dependent chaperone ClpB [Fischerella sp. JSC-11]
Length = 874
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/854 (53%), Positives = 621/854 (72%), Gaps = 22/854 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAI E+A H Q HL +LL A +I N G N
Sbjct: 5 NPNQFTEKAWEAIVRTPEIAKQFQHQQIESEHLMRSLLEQEG--LASSIFNKAGVNVQIL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + ++ + + +L ++ RA+ +K GD +++++ L+L +D
Sbjct: 63 RDRTHDFINRQPKVSGGSSGSVYLGRSLDTLLDRAEQYRKNFGDEYISIEHLVLAFAKDD 122
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E G+ ++++ +E++RG + KV + + +++L+ YGRDL + A GKL
Sbjct: 123 RFGKTLFQELGLNEQKLRTTIEQIRGSQ--KVTDQNPEGKYESLEKYGRDLTKLAREGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D L
Sbjct: 181 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSGDVPESLRDRTL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I LDMGAL+AGAKYRGEFEERLKAVLKEV+EA+G +ILFIDEIH V+GAG T+G+MDA N
Sbjct: 241 IGLDMGALIAGAKYRGEFEERLKAVLKEVQEAQGHIILFIDEIHTVVGAGATQGAMDAGN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KP+LARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PS+ DT+SILRGLKE+Y
Sbjct: 301 LLKPLLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSIEDTISILRGLKERY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 361 ELHHGVKISDNALVAAAVLSTRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D ASK RL + KEL DL+++ L +++ EKE ID+I++LK+
Sbjct: 421 KILQLEMERLSLQKETDSASKERLERLEKELSDLKEQQSALNAQWQAEKEIIDQIQKLKE 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG + +++E A +L Q+ ML E V
Sbjct: 481 EIDRVNIEIQQAERDYDLNRAAELKYGKLTDLQRQLETAETRLSETQTSGKSMLREEVTE 540
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIPV++L ++E ++L +G EAV AVA+++ RSRAGL
Sbjct: 541 ADIAEIISKWTGIPVSKLVESEMQKLLHLEEELHKRVVGQDEAVTAVADAIQRSRAGLAD 600
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 601 PNRPIASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDMSEYMEKHTVSRLIGAPPGY 660
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPY+V+LFDE+EKAH VFN +LQ+LDDGRLTD QG TVDF+NTV
Sbjct: 661 VGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRLTDAQGHTVDFKNTV 720
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSN+G++++L + RD+V++ +R +FRPE LNR+DEI++F L +QLR
Sbjct: 721 VIMTSNIGSQYILDVAGDDSKYEEMRDRVMEAMRANFRPEFLNRIDEIIIFHSLQSQQLR 780
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ++ + RL ER +AL +++ ALD + YDP+YGARP++R ++ ++ T +++
Sbjct: 781 EIVKLQVQRLEQRLVERKLALKLSEEALDWLAQVGYDPVYGARPLKRAIQTELETPIAKA 840
Query: 824 LVREEIDENSTVYI 837
++R E E T+Y+
Sbjct: 841 ILRGEFHEGDTIYV 854
>gi|407393543|gb|EKF26650.1| ATP-dependent Clp protease subunit, heat shock protein 100
(HSP100), putative [Trypanosoma cruzi marinkellei]
Length = 868
Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/868 (54%), Positives = 619/868 (71%), Gaps = 27/868 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
++T+ A+ A LA G+ P+HLA AL D +G+ ++ + G A
Sbjct: 7 EWTNAAATALQDAVALARKHGNGFLDPVHLACALFKDENGLPSRVLKKVG-------AGI 59
Query: 65 VFNQAMKK---LPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
V + M + +P+Q+PAP + ++ + +V+ A+ + A GDT LAVD L+L L E
Sbjct: 60 VMDALMARVEAIPTQSPAPTQPHPNSDMTRVLNTAEQKRVAFGDTLLAVDHLLLALYESK 119
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ K AG V+ +++LR +G+K+ S D + AL Y D+ QA GKLD
Sbjct: 120 DTNSILKAAGADSKTVEKALKELR--KGKKITSEFQDQNYDALSKYAIDMCRQAEDGKLD 177
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
P+IGR +E+ R +R+LSRRTKNNPVLIGEPGVGKT++VEG+AQ+IVRGDVP LA R+
Sbjct: 178 PLIGRADEVLRTIRVLSRRTKNNPVLIGEPGVGKTSIVEGIAQQIVRGDVPDTLASSRIF 237
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+GAL+AGAKYRGEFEERLK+VL EV E+ +ILFIDE+H+VLGAG++EG+MDAANL
Sbjct: 238 SLDLGALIAGAKYRGEFEERLKSVLNEVRESPTPIILFIDEMHVVLGAGKSEGAMDAANL 297
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTLEEYRKYVEKDAAFERRF VYV EPSV + +SILRGLKE+YE
Sbjct: 298 LKPMLARGELRTIGATTLEEYRKYVEKDAAFERRFMPVYVTEPSVDECISILRGLKERYE 357
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HHGV+I D A+VVA QL+ RYITGR +PDKAIDL+DEACANVRVQL S+PEEID LERK
Sbjct: 358 THHGVQITDNAVVVAVQLADRYITGRFMPDKAIDLIDEACANVRVQLSSRPEEIDQLERK 417
Query: 420 RMQLEIELHALEKE-KDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+ QLEIE ALE++ K+K+S+ RL V+ ++ + + LQPL+ RY +E++R+DE++ ++
Sbjct: 418 KRQLEIEAKALERDKKEKSSQERLKVVKGDIQRVEELLQPLLARYNEERQRVDELQEMQT 477
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL-EGNQSDENLMLTETVGPDQI 537
+ +E L+ AER D+ AADL+Y AI ++ I L E + + M+ E V ++
Sbjct: 478 RLDEKKTKLERAERMRDMELAADLKYNAIPAIQDRIRSLKEKIEQQKASMVQEKVTEVEV 537
Query: 538 AEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQ 586
A VV+RWTGIPV +L Q ++ERL+ L+ EAV V+E++LRSRAGL RP
Sbjct: 538 AAVVARWTGIPVKKLSQTDRERLLQLSSHLHRRVKGQDEAVERVSEAILRSRAGLSRPHA 597
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
PTGSFLFLGPTGVGKTELAKA+AE+LFDDE +VRIDMSEYMEQH+V+RLIGAPPGYVGH
Sbjct: 598 PTGSFLFLGPTGVGKTELAKAVAEELFDDEKHMVRIDMSEYMEQHAVARLIGAPPGYVGH 657
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTE VRRRP++VVL DEVEKAH SVFN LLQVLDDGRLTD GRTVDF N +++M
Sbjct: 658 EEGGQLTEPVRRRPHTVVLLDEVEKAHPSVFNVLLQVLDDGRLTDSHGRTVDFSNAIVVM 717
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG+EHL+ + R++V Q +R +FRPE LNRLD+IV+F L +L +
Sbjct: 718 TSNLGSEHLVHVGNSPKGWEAMREKVWQVLRSYFRPEFLNRLDDIVLFRRLGFGELHDII 777
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
L + +V RL + + L VTD A + VL ++D GARP+RRW+EK + TE+SRM+V
Sbjct: 778 DLIVAEVNGRLKSQDILLEVTDEAKNFVLENAFDAEMGARPLRRWVEKYITTEVSRMIVA 837
Query: 827 EEIDENSTVYIDASPKGDNLVYRVQKNG 854
+++ NSTV + + L + V+++
Sbjct: 838 QQLPPNSTVRVLVNSSQGKLAFSVKRSS 865
>gi|428209571|ref|YP_007093924.1| ATP-dependent chaperone ClpB [Chroococcidiopsis thermalis PCC 7203]
gi|428011492|gb|AFY90055.1| ATP-dependent chaperone ClpB [Chroococcidiopsis thermalis PCC 7203]
Length = 875
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/855 (53%), Positives = 631/855 (73%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA ++A + Q HL ALL D G+ A +I N G N +
Sbjct: 5 NPNQFTEKAWEAIAHTPDIAKAVPQQQIESEHLMKALL-DQEGL-ASSIFNKAGVNVTKL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R Q +K+ P + + + +L ++ RA A ++ D +++++ L+L +D
Sbjct: 63 RDRT-EQFIKRQPKLSGSVSSVYLGRSLDTLLDRADAYRQEFADEYISIEHLLLAYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E G+ ++K+ ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGRSLFQEFGLDENKLKNTIKQVRGNQ--KVTDQNPEGKYEALEKYGRDLTDAARQGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR V+ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKEV E++G ++LFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEVTESKGNIVLFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D A+V AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVRISDSAVVAAATLSNRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +LEKE D AS+ RL + KE+ DL+++ L +++ EK+ I++I+ +K+
Sbjct: 420 KILQLEMERLSLEKESDPASRERLGRLEKEVADLKEEQAALNAQWQSEKDVINKIQSVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL +AA+L+YG + +++EAA QL Q+ +L E V
Sbjct: 480 EIDRVNVEIQQAERDYDLNKAAELKYGKLTDLHRQLEAAESQLTQTQTTGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAEV+S+WTGIP+++L + EKE+L IG EAV AVA+++ RSRAGL
Sbjct: 540 ADIAEVISKWTGIPISKLVETEKEKLLNLEDELHHRVIGQNEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFIFLGPTGVGKTELAKALAAYLFDTEEALVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSVVLFDE+EKAH VFN +LQ+LDDGR+TD QG TVDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVVLFDEIEKAHPDVFNVMLQILDDGRVTDAQGHTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSN+G++++L + R +V++ +R FRPE LNR+DEI++F L ++LR
Sbjct: 720 VIMTSNIGSQYILDIAGDDSRYEEMRGRVMEAMRNSFRPEFLNRIDEIIIFHALQIQELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ++ + RL +R ++L ++DAALD + YDP++GARP++R +++++ T++++
Sbjct: 780 QIVKLQIQRLEQRLGDRKMSLRLSDAALDFLAEVGYDPVFGARPLKRAIQRELETQIAKS 839
Query: 824 LVREEIDENSTVYID 838
++R E ++ T+++D
Sbjct: 840 ILRNEFNDGDTIFVD 854
>gi|298527689|ref|ZP_07015093.1| ATP-dependent chaperone ClpB [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511341|gb|EFI35243.1| ATP-dependent chaperone ClpB [Desulfonatronospira thiodismutans
ASO3-1]
Length = 868
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/874 (52%), Positives = 627/874 (71%), Gaps = 29/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ EAI+ A E+A GH Q HL +LL G+ + + AG ++
Sbjct: 1 MDINKFTQKSQEAISAAQEVAMRLGHQQVEVEHLFKSLLEQEQGLVPRILQQAGYNPSSI 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S ++ ++KLP + P +I + L ++ +AQ K D +++V+ ++L +
Sbjct: 61 STS--LDKQLEKLPRVSGPGSQPGQIYVTQRLNSLLLKAQDLAKNMQDEYVSVEHILLSI 118
Query: 118 LEDSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
L++S G + E + +V S + +RG + +V S+S + T+ ALK YGRDLVE+
Sbjct: 119 LDESPSTGAGKVIAEYKIDKNKVLSALTSVRGSQ--RVTSSSPEETYDALKKYGRDLVEE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRR +RILSRRTKNNPVLIGE GVGKTA+ EGLAQRI+ DVP
Sbjct: 177 AQEGKLDPVIGRDSEIRRCIRILSRRTKNNPVLIGEAGVGKTAIAEGLAQRILNRDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMGAL+AGAKYRGEFEERLKAVLKEV+++EG+++LFIDEIH ++GAG+ EG
Sbjct: 237 LKDKTIFALDMGALIAGAKYRGEFEERLKAVLKEVQQSEGRILLFIDEIHTIVGAGKGEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA NL KPMLARG+L CIGATT+ EYRK +EKD A ERRFQ V V EPSV DT+SILR
Sbjct: 297 SMDAGNLLKPMLARGELHCIGATTINEYRKNIEKDPALERRFQPVMVDEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGVRI D +LV AA LS RYI+ R LPDKAIDL+DE+ A +R ++DS P E
Sbjct: 357 GLRERFEVHHGVRISDGSLVSAATLSHRYISDRFLPDKAIDLIDESAAKIRSEIDSLPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK MQLEIE AL++EKD+AS+ RL ++ +EL DL+++ L R+++EKE I+
Sbjct: 417 LDEINRKIMQLEIEQEALKREKDEASRERLEKLGQELADLKEEQARLRSRWEREKESINS 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R LK+ E ++ AER YDL +AA+LRYG + ++E + + E SDE ++L
Sbjct: 477 LRSLKEDIERTKLEIENAERAYDLNKAAELRYGKLHQLEKELAEKESAISGDSDEEMLLK 536
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSR 578
E VGPD +AE++S+WTGIPVT+L + E+E+L+ LA EAV+AVA++VLR+R
Sbjct: 537 EEVGPDDVAEIISKWTGIPVTKLLEGEREKLLKLADILHERVIGQDEAVDAVADAVLRAR 596
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
+GL P +P GSFLFLGPTGVGKTEL K LA LFD +VR+DMSEYME+H+V+R+IG
Sbjct: 597 SGLKDPNRPIGSFLFLGPTGVGKTELTKTLALNLFDTVENMVRLDMSEYMEKHTVARMIG 656
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG++EGGQLTEA+RR+PYSV+LFDEVEKAH VFN LLQ++DDGRLTD GRTVD
Sbjct: 657 APPGYVGYDEGGQLTEAIRRKPYSVILFDEVEKAHADVFNVLLQIMDDGRLTDSHGRTVD 716
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSNLG+++LL G+ + + + ARDQV+ V+ HFRPE LNRLDEIV+F PL
Sbjct: 717 FKNTVIIMTSNLGSQYLLEGISPEGHLREDARDQVMSTVKSHFRPEFLNRLDEIVLFKPL 776
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
E++ ++ L ++ + RL +R +++ ++D A + E+YDP+YGARP+RR+L++ V
Sbjct: 777 LLEEIEQIIELLLQQIRNRLQDRKISVELSDTARHFIAKEAYDPVYGARPLRRYLQQHVE 836
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T L++ ++ + + V ID + D L + Q
Sbjct: 837 TPLAKEIISGRLMDGQQVTIDL--ENDQLSIKAQ 868
>gi|218885671|ref|YP_002434992.1| ATP-dependent chaperone ClpB [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218756625|gb|ACL07524.1| ATP-dependent chaperone ClpB [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 862
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/857 (54%), Positives = 619/857 (72%), Gaps = 25/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ +AIA A A GH Q H A+AL+ G+ + + AG + A
Sbjct: 1 MDINKFTEKSQQAIAEAQSTAVRLGHQQVDVEHAALALVRQEQGLVPRLLERAGYKPDAF 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ A++K P+ + A +I + L + + RAQ K D +++V+ LI
Sbjct: 61 AG--ALEAALQKRPAVSGPGAAQGQIYVTQRLNQALVRAQDFAKRLKDEYVSVEHLICAF 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
LE+ + +G + +E G+ ++ + +E +RG ++V S + + T++AL+ YGRDLVE+
Sbjct: 119 LEEPPSTDMGRVAREFGLTQDKLLAVLEDVRG--AQRVTSQNPEDTYEALQKYGRDLVEE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRRVVRILSRRTKNNPVLIGE GVGKTA+VEGLA RI++GDVP
Sbjct: 177 ARKGKLDPVIGRDAEIRRVVRILSRRTKNNPVLIGEAGVGKTAIVEGLAHRILKGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L + L ALDMGAL+AGAKYRGEFEERLKAVLKEVE+AEG++++FIDE+H ++GAG+T+G
Sbjct: 237 LKNRSLFALDMGALIAGAKYRGEFEERLKAVLKEVEKAEGRIVMFIDELHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EP+V DT+SILR
Sbjct: 297 AMDAGNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVVVDEPTVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGVRI D A+V A LS RYIT R LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLRERFEVHHGVRISDSAIVEAVTLSHRYITDRQLPDKAIDLIDEAAALIRTEIDSLPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK MQLEIE AL +E D AS+ RL ++ EL DLR L+ ++++EK ID
Sbjct: 417 LDEVNRKVMQLEIEREALRRETDAASRERLEKLENELADLRASQATLLAQWEREKGSIDA 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETV 532
+R +K++ E A+ EAER YDL RAA+L+Y + E+E + E DEN +L E V
Sbjct: 477 VRTIKEEIERTRLAIDEAERNYDLNRAAELKYSKLLELERKLAAAE-RGDDENRLLKEEV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
PD +AE+V+RWTGIPVTRL ++E+ ER++G EAV AVAE+VLR+RAGL
Sbjct: 536 RPDDVAEIVARWTGIPVTRLLESEREKLLRLGDVLHERVVGQDEAVQAVAEAVLRARAGL 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTEL K LAE LFD E+ +VRIDMSEYME+H+V+RLIGAPP
Sbjct: 596 SDPGRPIGSFIFLGPTGVGKTELCKTLAESLFDSEDNIVRIDMSEYMEKHAVARLIGAPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQ+LDDGRLTD GRTVDF+N
Sbjct: 656 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNVLLQILDDGRLTDSHGRTVDFKN 715
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVA-RDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
T+IIMTSN+G+ HLL G+ + + RD+V+ E+R+HFRPE LNR+DEIV+F PL E
Sbjct: 716 TIIIMTSNIGSSHLLDGITDEGEFRPGVRDRVMDEMRRHFRPEFLNRVDEIVMFRPLLPE 775
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q+ ++ L + + RLAER + + ++DAA D + +YDP+YGARP+RR+L+ V T L
Sbjct: 776 QIGRIVELLLGKLRGRLAERKITVDLSDAARDFIAESAYDPVYGARPLRRYLQTNVETPL 835
Query: 821 SRMLVREEIDENSTVYI 837
+R L+ ++ + V I
Sbjct: 836 ARRLIAGDLKDGQHVTI 852
>gi|1946209|emb|CAA86116.1| 100 kDa heat shock protein (Hsp100) [Leishmania major]
Length = 867
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/865 (53%), Positives = 614/865 (70%), Gaps = 20/865 (2%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
++ ++ +A LA + P+HLA + D + + ++A+ G A S +
Sbjct: 7 EWKQAASDLMARMAALARKKANGYLDPVHLAYVMFEDENSLASRAVRKLG----AASVKD 62
Query: 65 VFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG 124
+ +P+Q PAP + ++ +++V+ A+ + A GDT +A D +L L E ++G
Sbjct: 63 GLEARVDAIPNQMPAPTQPRPNSDMMRVMNTAEQERAALGDTLMAADHFLLALHESKEVG 122
Query: 125 DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVI 182
+ AG +++ + ++R +G+K+ S D +++L Y DL +QA GKLDPVI
Sbjct: 123 RILDAAGAGKKAIRATLLEMR--KGKKITSDFQDDNYESLNKYAVDLCKQAEDGKLDPVI 180
Query: 183 GRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALD 242
GR +EI R +R+LSRRTKNNPVLIGEPGVGKTA+VEG+AQ++VRGDVP L+ +R+ +LD
Sbjct: 181 GRADEILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLD 240
Query: 243 MGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKP 302
MGAL+AGAKYRGEFEERLKAVL EV+E++ K+ILFI EIHLVLGAG+++G+MDAANL KP
Sbjct: 241 MGALIAGAKYRGEFEERLKAVLNEVKESDNKIILFIVEIHLVLGAGKSDGAMDAANLLKP 300
Query: 303 MLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHH 362
+LARG +R IGATTLEEYR+YVEKDAAFERRF V V EPSV + SILRGLK++YE HH
Sbjct: 301 LLARGDVRTIGATTLEEYRQYVEKDAAFERRFMPVQVHEPSVEECTSILRGLKDRYEQHH 360
Query: 363 GVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQ 422
GV+I D+A+VVAAQL+ RYIT R LPDKAIDL+DEACANVRV L S+P EID LERK+ Q
Sbjct: 361 GVQITDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQ 420
Query: 423 LEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREE 482
LEIE AL+++KD ++K RL V+ E+ + +KL PL+ +Y++E+ RIDE++ + K +E
Sbjct: 421 LEIEERALQRDKDASAKERLKAVKAEIQKVEEKLGPLLAKYEQERGRIDELQATQAKLDE 480
Query: 483 LLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL-EGNQSDENLMLTETVGPDQIAEVV 541
L+ AER D+ AADL+Y I ++ I L E + + ML TV IA VV
Sbjct: 481 KKVKLERAERMRDMETAADLKYRVIPILQDRIRSLKEAIEKQKATMLQGTVTGTDIATVV 540
Query: 542 SRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPTGS 590
SRWT IPVT+L Q E+ERL+ LA EAV+ VAE++LRSRAGL R +PTGS
Sbjct: 541 SRWTNIPVTKLSQTERERLLHLADQLHLRVKGQDEAVSRVAEAILRSRAGLARSDRPTGS 600
Query: 591 FLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGG 650
FLFLGPTGVGKTEL+KA+A +LFDD +VR+DMSEYMEQHSV+RLIG PPGYVGHEEGG
Sbjct: 601 FLFLGPTGVGKTELSKAVASELFDDAKYMVRLDMSEYMEQHSVARLIGTPPGYVGHEEGG 660
Query: 651 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL 710
QLTE VRRRPY+VVL DEVEKAH +VFN LLQVLDDGRLTD GRTVDF NT+IIMTSNL
Sbjct: 661 QLTEPVRRRPYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVDFCNTIIIMTSNL 720
Query: 711 GAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQM 770
GA++L + +VA+ QV+ EVRK FRPE +NRLD+I++F L +++ + L
Sbjct: 721 GAQYLQNMDTSPKPYEVAQAQVMGEVRKFFRPEFINRLDDIILFRSLGLKEMTGIIDLIT 780
Query: 771 KDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEID 830
+++ RL ++ + +++T+ A VL ++D GARP+RRW+EK + TELSRM++ +E+
Sbjct: 781 EELNGRLKDQSIRVSLTEEAKQYVLESAFDADMGARPLRRWVEKNITTELSRMIISQELS 840
Query: 831 ENSTVYIDASPKGDNLVYRVQKNGG 855
NSTV + S L + V++
Sbjct: 841 PNSTVKVTLSSNHKKLSFSVKRTAA 865
>gi|282881960|ref|ZP_06290605.1| ATP-dependent chaperone protein ClpB [Peptoniphilus lacrimalis
315-B]
gi|281298235|gb|EFA90686.1| ATP-dependent chaperone protein ClpB [Peptoniphilus lacrimalis
315-B]
Length = 859
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/855 (53%), Positives = 621/855 (72%), Gaps = 25/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T K+ +AI A ++A G+ Q +HL ALL+D G+ + ++ A
Sbjct: 1 MNFEKYTQKSLQAIKDATDIAREYGNPQVKEIHLNYALLNDNDGLIPRVLDYMDVNKEAL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
+E + + +++LP Q+ + A + KV+ +A+ GD +L+V+ + + LL
Sbjct: 61 KSELL--RVIQRLPRQSGGS--LSADESYTKVLDQAEKNMTKFGDDYLSVEHIYMALLNL 116
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ + +FK+ G+ S ++K+RG + V + + + T+ ALK YGRDL ++A
Sbjct: 117 KGTDSSSVFKKYGINSDNFLSALQKIRGNQN--VRTDNPEDTYDALKKYGRDLTKEAKEA 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DPVIGRDEE+R V+RILSRRTKNNP LIG PGVGKTA+VEGLAQRI+ DVP L
Sbjct: 175 KMDPVIGRDEEVRNVIRILSRRTKNNPCLIGPPGVGKTAIVEGLAQRIINEDVPEGLKGK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMGALVAGAKYRGEFEERLKAVL EVE++EG +ILFIDEIH ++GAG+TEG+MDA
Sbjct: 235 TVFSLDMGALVAGAKYRGEFEERLKAVLSEVEKSEGNIILFIDEIHNIVGAGKTEGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KPMLARG+L IGATTL+EYRKY+EKD A ERRFQ+V V EPSV DT+SILRGLK
Sbjct: 295 SNLLKPMLARGELHAIGATTLDEYRKYIEKDPALERRFQKVIVNEPSVEDTISILRGLKS 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HG+RI D A++ AA LS RYIT R LPDKAIDL+DE+CA +R ++DS P EID++
Sbjct: 355 KYEIFHGIRISDSAVIAAATLSNRYITDRFLPDKAIDLMDESCAMLRTEIDSMPTEIDDV 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK +QLEIE AL+KEKD ASK RL + KEL + + L R++ EK+ ID+ + +
Sbjct: 415 RRKILQLEIEREALKKEKDDASKKRLENLEKELSEEKSDFDRLKSRWESEKKEIDKEKVV 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K+K E + ++EA+R Y+L + ++LRYG + ++E + +L+ N+ D+ M+ E V D+
Sbjct: 475 KEKIENVNHQIEEAQRSYNLEKLSELRYGTLPKLEEELKELQTNKKDDT-MVKEEVTEDE 533
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA VVSRWTGIPV +L Q+++++L IG EAV V ++V+R+RAGL
Sbjct: 534 IAYVVSRWTGIPVEKLNQSQRDKLLDLGNILHKRVIGQDEAVQVVTDAVIRARAGLKAEN 593
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTE AKAL E LFDDE ++RIDMSEYME+ SVSRL+G+PPGYVG
Sbjct: 594 RPIGSFIFLGPTGVGKTETAKALTEALFDDEKNMIRIDMSEYMEKFSVSRLVGSPPGYVG 653
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQVLDDGRLTD QGRTVDF+NTVII
Sbjct: 654 YEEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDNQGRTVDFKNTVII 713
Query: 706 MTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
MTSN+G+++L+ G+ G+++ Q AR++V +E+R FRPE LNR+DEIV+F PL +Q+
Sbjct: 714 MTSNIGSQYLIDGIEENGQIS-QSARNEVDKELRSSFRPEFLNRVDEIVLFKPLVKDQIY 772
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
K+ + +KD+ +L++R + + VT AL+ +L S+D YGARP++R++ + V T+LS +
Sbjct: 773 KIIKQTIKDIEEKLSDRQIKIEVTQEALEFILKASFDINYGARPVKRYINQSVETKLSLL 832
Query: 824 LVREEIDENSTVYID 838
L++ E+ ENSTV +D
Sbjct: 833 LIKGEVTENSTVIVD 847
>gi|354564799|ref|ZP_08983975.1| ATP-dependent chaperone ClpB [Fischerella sp. JSC-11]
gi|353549925|gb|EHC19364.1| ATP-dependent chaperone ClpB [Fischerella sp. JSC-11]
Length = 872
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/855 (53%), Positives = 628/855 (73%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA E+A H Q HL ALL A + G N +
Sbjct: 5 NPNQFTEKAWEAIAHTPEIAKQNHHQQIESEHLMKALLEQEG--LAAPVFTKLGVNLQKL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R +Q +++ P + + + + +L ++ RA+ +K GD +++++ L+L +D
Sbjct: 63 RDRT-DQFIQRQPRVSGSINSVYLGRSLDSLLDRAEGYRKEFGDEYISIEHLLLAYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E G+ ++K ++++RG + KV + + +QAL+ YGRDL E A GKL
Sbjct: 122 RFGKSLFQEFGLDERKLKDTIKQIRGSQ--KVTDQNPEGKYQALEKYGRDLTEAARQGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKEV E+ G +ILFIDEIH V+GAG T+G+MDA+N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEVTESGGNIILFIDEIHTVVGAGATQGAMDASN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS+RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 ELHHGVKISDNALVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE + AS+ RL + KEL DL+++ + L +++ EK+ I +I+ +K+
Sbjct: 420 KILQLEMEKLSLQKESNTASRERLERLEKELADLKEEQRALNAQWQSEKDIITKIQSVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG + +++EAA +L Q +L E V
Sbjct: 480 EIDRVNLEIQQAERDYDLNRAAELKYGKLTDLHRKLEAAESELAQTQHTGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAEV+S+WTGIP+++L ++EKE+L +G EAV AVA+++ RSRAGL
Sbjct: 540 SDIAEVISKWTGIPISKLVESEKEKLLHLEDELHRRVVGQQEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFIFLGPTGVGKTELAKALAAYLFDTEEALVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTE++RRRPY+V+LFDE+EKAH VFN LLQ+LDDGR+TD QG TVDF+NT+
Sbjct: 660 VGYEEGGQLTESIRRRPYAVILFDEIEKAHPDVFNILLQILDDGRVTDAQGHTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++ +L + R +V++ +R FRPE LNR+DEI++F L E+LR
Sbjct: 720 IIMTSNIGSQFILDVAGDESRYDEMRHRVMEAMRNSFRPEFLNRIDEIIIFHGLQKEELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ++ + RL +R ++L ++DAALD + YDP++GARP++R +++++ T +++
Sbjct: 780 EIVQLQIERLRQRLGDRKISLKLSDAALDFLAEVGYDPVFGARPLKRAIQRELETPIAKA 839
Query: 824 LVREEIDENSTVYID 838
++R E ++ T+++D
Sbjct: 840 ILRGEFNDGDTIFVD 854
>gi|389696003|ref|ZP_10183645.1| ATP-dependent chaperone ClpB [Microvirga sp. WSM3557]
gi|388584809|gb|EIM25104.1| ATP-dependent chaperone ClpB [Microvirga sp. WSM3557]
Length = 873
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/858 (54%), Positives = 611/858 (71%), Gaps = 21/858 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + + A LA GH Q P H+ LL DP G+ A I+ AGG + +
Sbjct: 1 MNFEKYTERARGFVQAAQNLAVREGHPQLAPGHILKVLLDDPEGLCAGLIDRAGGRS--R 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A Q + K P + + + A+ L++ A+ A + GD+ + V++++L L
Sbjct: 59 DAHATVEQWLAKQPKVSGSASQPQATRELMRFFDTAEKAAEKAGDSFVTVERMLLALAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+D++ G + +AGV + + + LR +GR ++A+ + + ALK Y RDL E A G
Sbjct: 119 KDTEAGKILAQAGVTAQGLNAAINALR--KGRTADNATAENAYDALKKYARDLTEAARDG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL+EV AEG +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 QLLALDMGALIAGAKYRGEFEERLKAVLQEVTSAEGGIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+DN+
Sbjct: 357 KYEQHHGVRITDSALVAAATLSNRYITDRFLPDKAIDLVDEASSRLRMQVDSKPEELDNI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ ++L+IE AL+KE D ASK RL + KEL DL ++ + R+K EK+++ L
Sbjct: 417 DREIVRLKIEQEALKKETDTASKDRLERLSKELADLEEQSDAITTRWKAEKDKLGTAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K+K EE L A+R D A+A +L YG I +E + ++E ++D ++ E V PD
Sbjct: 477 KKKLEEARNQLAAAQRGGDWAKAGELSYGVIPGLEKQLSEVEA-RADGGGLMEEAVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+VVSRWTG+PV ++ + E+E R++G AEAV AV+ +V R+RAGL P
Sbjct: 536 VAQVVSRWTGVPVDKMLEGEREKLLHMEQDLAKRVVGQAEAVTAVSTAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDDE LVRIDMSEYME+HSV+RLIGAPPGYVG
Sbjct: 596 RPIGSFMFLGPTGVGKTELTKALASFLFDDETALVRIDMSEYMEKHSVARLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 656 YEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ G+ T V RD+V+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 MTSNLGAEYLVNQPEGQDTDAV-RDEVMSVVRSHFRPEFLNRVDEIILFHRLKRSEMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L +R + L + + A + + + YDP YGARP++R ++K V L+ +++
Sbjct: 775 VDIQMRRLQKLLEDRKITLQLDEEARNWLADKGYDPAYGARPLKRVIQKNVQDPLAELIL 834
Query: 826 REEIDENSTVYIDASPKG 843
EI + TV + A P G
Sbjct: 835 SGEIHDGETVPVHAGPMG 852
>gi|434392140|ref|YP_007127087.1| ATP-dependent chaperone ClpB [Gloeocapsa sp. PCC 7428]
gi|428263981|gb|AFZ29927.1| ATP-dependent chaperone ClpB [Gloeocapsa sp. PCC 7428]
Length = 872
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/855 (52%), Positives = 630/855 (73%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA ++ +A Q HL ALL A +I G N +
Sbjct: 5 NPNQFTEKAWEAIAHTPDIVKAAQQQQIESEHLMKALLEQDG--LASSILTKAGVNVQKV 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
ER Q +++ P + + + +L ++ RA+ +K D +++++ L+L + D
Sbjct: 63 RERA-EQFIQRQPKVSGSGSSVYLGRSLDTLLDRAENYRKELADEYISIEHLLLAYVNDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E G+ A+++ ++++RG + +V + + +++L+ YGRDL E A GKL
Sbjct: 122 RFGKSLFQEFGLDEAKLRGIIKQVRGSQ--RVTDQNPEGKYESLEKYGRDLTEAARQGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKEV E++GK+ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEVTESQGKIILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D A+V AA LS+RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKISDSAVVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + KEL DL+++ + L +++ EK+ I++I+ +K+
Sbjct: 420 KILQLEMEKLSLQKESDPASRERLERLEKELADLKEQQRALNAQWQSEKDVINQIQAIKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL +AA+L+YG + +++E A +L Q+ +L E V
Sbjct: 480 EIDRVNVEIQQAERDYDLNKAAELKYGKLTDLHRQLEEAETKLAQTQTTGQSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L IG EAV AVA+++ RSRAGL
Sbjct: 540 ADIAEIISKWTGIPISKLVESEKEKLLHLEDELHRRVIGQNEAVTAVADAIARSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPY+VVLFDE+EKAH VFN +LQ+LDDGR+TD QG TVDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVMLQILDDGRVTDAQGHTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + R +V+ +R FRPE LNR+DEI++F L ++LR
Sbjct: 720 IIMTSNIGSQYILDIAGDDSRYEEMRSRVMDAMRNSFRPEFLNRIDEIIIFHALQKQELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ++ + RLAER ++L +++AALD + YDP++GARP++R +++++ T++++
Sbjct: 780 HIVQLQVQRLEKRLAERKMSLKLSNAALDFLAEVGYDPVFGARPLKRAIQRELETQIAKS 839
Query: 824 LVREEIDENSTVYID 838
++R E ++ T+Y+D
Sbjct: 840 ILRGEFNDGDTIYVD 854
>gi|300813362|ref|ZP_07093713.1| ATP-dependent chaperone protein ClpB [Peptoniphilus sp. oral taxon
836 str. F0141]
gi|300512505|gb|EFK39654.1| ATP-dependent chaperone protein ClpB [Peptoniphilus sp. oral taxon
836 str. F0141]
Length = 859
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/855 (52%), Positives = 621/855 (72%), Gaps = 25/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T K+ +AI A ++A G+ Q +HL ALL+D G+ + ++ A
Sbjct: 1 MNFEKYTQKSLQAIKDATDIAREYGNPQVKEIHLNYALLNDNDGLIPRVLDYMDVNKEAV 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
+E + + +++LP Q+ + A + +V+ +A+ GD +L+V+ + + LL
Sbjct: 61 KSELL--RVIQRLPRQSGGS--LSADESYTRVLDQAEKNMTKFGDDYLSVEHIYMALLNL 116
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ + +FK+ G+ S ++K+RG + V + + + T+ ALK YGRDL ++A
Sbjct: 117 KGTDSSSVFKKYGINSDNFLSALQKIRGNQN--VRTDNPEDTYDALKKYGRDLTKEAKEA 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DPVIGRDEE+R V+RILSRRTKNNP LIG PGVGKTA+VEGLAQRI+ DVP L
Sbjct: 175 KMDPVIGRDEEVRNVIRILSRRTKNNPCLIGPPGVGKTAIVEGLAQRIINEDVPEGLKGK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMGALVAGAKYRGEFEERLKAVL EVE++EG +ILFIDEIH ++GAG+TEG+MDA
Sbjct: 235 IVFSLDMGALVAGAKYRGEFEERLKAVLSEVEKSEGNIILFIDEIHNIVGAGKTEGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KPMLARG+L IGATTL+EYRKY+EKD A ERRFQ+V V EPSV DT+SILRGLK
Sbjct: 295 SNLLKPMLARGELHAIGATTLDEYRKYIEKDPALERRFQKVIVNEPSVEDTISILRGLKS 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HG+RI D A++ AA LS RYIT R LPDKAIDL+DE+CA +R ++DS P EID++
Sbjct: 355 KYEIFHGIRISDSAVIAAATLSNRYITDRFLPDKAIDLMDESCAMLRTEIDSMPTEIDDV 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK +QLEIE AL+KEKD ASK RL + KEL + + L R++ EK+ ID+ + +
Sbjct: 415 RRKILQLEIEREALKKEKDDASKKRLENLEKELSEEKSDFDRLKSRWESEKKEIDKEKVV 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K+K E + ++EA+R Y+L + ++LRYG + ++E + +L+ N+ D+ M+ E V D+
Sbjct: 475 KEKIENVNHKIEEAQRSYNLEKLSELRYGTLPKLEEELKELQTNKKDDT-MVKEEVTEDE 533
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA VVSRWTGIPV +L Q+++++L IG EAV V ++V+R+RAGL
Sbjct: 534 IAYVVSRWTGIPVEKLNQSQRDKLLDLGNILHKRVIGQDEAVQVVTDAVIRARAGLKAEN 593
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTE AKAL E LFDDE ++RIDMSEYME+ SVSRL+G+PPGYVG
Sbjct: 594 RPIGSFIFLGPTGVGKTETAKALTEALFDDEKNMIRIDMSEYMEKFSVSRLVGSPPGYVG 653
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQVLDDGRLTD QGRTVDF+NTVII
Sbjct: 654 YEEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDNQGRTVDFKNTVII 713
Query: 706 MTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
MTSN+G+++L+ G+ G+++ Q AR++V +E+R FRPE LNR+DEIV+F PL +Q+
Sbjct: 714 MTSNIGSQYLIDGIEENGQIS-QSARNEVDKELRSSFRPEFLNRVDEIVLFKPLVKDQIY 772
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
K+ + +KD+ +L++R + + VT AL+ +L S+D YGARP++R++ + V T+LS +
Sbjct: 773 KIIKQTIKDIEEKLSDRQIKIEVTQEALEFILKASFDINYGARPVKRYINQSVETKLSLL 832
Query: 824 LVREEIDENSTVYID 838
L++ E+ ENSTV +D
Sbjct: 833 LIKGEVTENSTVIVD 847
>gi|407866895|gb|EKG08443.1| ATP-dependent Clp protease subunit, putative [Trypanosoma cruzi]
Length = 868
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/868 (53%), Positives = 619/868 (71%), Gaps = 27/868 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
++T+ A+ A LA + P+HLA AL D +G+ ++ + G A
Sbjct: 7 EWTNAAATALQDAVALARKHSNGFLDPVHLACALFKDENGLPSRVLKKVG-------AGI 59
Query: 65 VFNQAMKK---LPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
V + M + +P+Q+PAP + ++ + +V+ A+ + A GDT LAVD L+L L E
Sbjct: 60 VMDALMARVEAIPTQSPAPTQPHPNSDMTRVLNTAEQKRVAFGDTLLAVDHLLLALYESK 119
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ K AG V+ +++LR +G+K+ S D + AL Y D+ QA GKLD
Sbjct: 120 DTNSILKAAGADSKTVEKALKELR--KGKKITSEFQDQNYDALSKYAIDMCRQAEDGKLD 177
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
P+IGR +E+ R +R+LSRRTKNNPVLIGEPGVGKT++VEG+AQ+IVRGDVP L+ R+
Sbjct: 178 PLIGRADEVLRTIRVLSRRTKNNPVLIGEPGVGKTSIVEGIAQQIVRGDVPDTLSSSRIF 237
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+GAL+AGAKYRGEFEERLK+VL EV E+ +ILFIDE+H+VLGAG++EG+MDAANL
Sbjct: 238 SLDLGALIAGAKYRGEFEERLKSVLNEVRESPTPIILFIDEMHVVLGAGKSEGAMDAANL 297
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTLEEYRKYVEKDAAFERRF VYV EPSV + +SILRGLKE+YE
Sbjct: 298 LKPMLARGELRTIGATTLEEYRKYVEKDAAFERRFMPVYVTEPSVDECISILRGLKERYE 357
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HHGV+I D A+VVA QL+ RYITGR +PDKAIDL+DEACANVRVQL S+PEEID LERK
Sbjct: 358 THHGVQITDNAVVVAVQLADRYITGRFMPDKAIDLIDEACANVRVQLSSRPEEIDQLERK 417
Query: 420 RMQLEIELHALEKE-KDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+ QLEIE ALE++ K+K+S+ RL V+ ++ + + LQPL+ RY +E++R+DE+ ++
Sbjct: 418 KRQLEIEAKALERDKKEKSSQERLRIVKGDIQRVEELLQPLLARYNEERQRVDELHEMQT 477
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL-EGNQSDENLMLTETVGPDQI 537
+ +E L+ AER D+ AADL+Y AI ++ I L E + + M+ E V ++
Sbjct: 478 RLDEKKTKLERAERMRDMELAADLKYNAIPVIQDRIRSLKEKIEQQKASMVQEKVTEVEV 537
Query: 538 AEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQ 586
A VV+RWTGIPV +L Q ++ERL+ L+ EAV V+E++LRSRAGL RP
Sbjct: 538 AAVVARWTGIPVKKLSQTDRERLLQLSSHLHRRVKGQDEAVERVSEAILRSRAGLSRPHA 597
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
PTGSFLFLGPTGVGKTELAKA+A +LFDDE +VRIDMSEYMEQH+V+RLIGAPPGYVGH
Sbjct: 598 PTGSFLFLGPTGVGKTELAKAVAAELFDDEKHMVRIDMSEYMEQHAVARLIGAPPGYVGH 657
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTE VRRRP++VVL DEVEKAH SVFN LLQVLDDGRLTD GRTVDF N +++M
Sbjct: 658 EEGGQLTEPVRRRPHTVVLLDEVEKAHPSVFNVLLQVLDDGRLTDSHGRTVDFSNAIVVM 717
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG+EHL+ ++ R++V Q VR +FRPE LNRLD+IV+F L +L ++
Sbjct: 718 TSNLGSEHLVHVGNSPKGLEATREKVWQVVRSYFRPEFLNRLDDIVLFRRLGFGELHEII 777
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
L + +V RL + ++L VTD A + VL ++D GARP+RRW+EK + TE+SRM++
Sbjct: 778 DLIVAEVNGRLRSQDISLEVTDEAKNFVLENAFDAEMGARPLRRWVEKYITTEVSRMILA 837
Query: 827 EEIDENSTVYIDASPKGDNLVYRVQKNG 854
+++ NSTV + + L + V+++
Sbjct: 838 QQLPPNSTVRVLVNGSQGKLAFSVKRSS 865
>gi|37523146|ref|NP_926523.1| endopeptidase Clp ATP-binding chain B [Gloeobacter violaceus PCC
7421]
gi|54035799|sp|Q7NFE9.1|CLPB_GLOVI RecName: Full=Chaperone protein ClpB
gi|35214149|dbj|BAC91518.1| clpB [Gloeobacter violaceus PCC 7421]
Length = 872
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/855 (53%), Positives = 624/855 (72%), Gaps = 22/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K +AI E+A Q HL ALL D G A +I G N +
Sbjct: 5 NPNQFTEKAWDAIVRTTEVAKEYRQQQLESEHLFKALL-DQDGGLAGSIFTKAGVNLTKL 63
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
ERV Q + + P T + +L ++ RA+ +K +GD ++++ L+L +D
Sbjct: 64 GERV-EQFINRQPKLTNPGQSVYLGRSLDALLDRAEGFRKEYGDDFISIEHLVLAFAKDV 122
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G + +E + A++K+ V ++RG + KV S + ++T+++L YGRDL + A GKL
Sbjct: 123 RFGQQILREFSLDEAKLKAVVAQVRGNQ--KVTSQNPESTYESLDKYGRDLTQLAREGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L +L
Sbjct: 181 DPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVSGDVPESLQGRKL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AG+KYRGEFEERLKAVL EV ++EG+++LFIDEIH V+GAG T+G+MDA N
Sbjct: 241 IALDMGALIAGSKYRGEFEERLKAVLNEVTKSEGQIVLFIDEIHTVVGAGATQGAMDAGN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P+V DT+SILRGLKE+Y
Sbjct: 301 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPTVEDTISILRGLKERY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+ R LPDKAIDL+DEA A +++++ S+PE +D ++R
Sbjct: 361 EVHHGVRISDSALVAAAVLSHRYISDRFLPDKAIDLMDEAAAKLKMEITSKPEALDEVDR 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L KE D AS+ RL + KEL DL+++ + L +++ EK+ ID+++ +K+
Sbjct: 421 KILQLEMERLSLAKESDAASRDRLERLEKELADLKEEQRSLNAQWQAEKDIIDQVQAVKE 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVE----AAIGQLEGNQSDENLMLTETVGP 534
+ +++ +Q+AER YDL RAA+L+YG + E++ AA QL Q+ +L E V
Sbjct: 481 EIDQVNVQIQQAERDYDLNRAAELKYGKLSELQKRLDAADKQLSETQTSGRSLLREEVTE 540
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
+ IAE++S+WTGIPV++L +E+E R++G EAV V+E++ RSRAGL
Sbjct: 541 EDIAEIISKWTGIPVSKLVASEREKLLHLEDELHKRVVGQEEAVRIVSEAIQRSRAGLAD 600
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFDDEN +VRIDMSEYME+HSVSRLIGAPPGY
Sbjct: 601 PNRPIASFIFLGPTGVGKTELAKALASFLFDDENAMVRIDMSEYMEKHSVSRLIGAPPGY 660
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRRRPY+VVLFDE+EKAH VFN LLQVLDDGR+TD QGRT+DF+N V
Sbjct: 661 VGYDEGGQLTEAVRRRPYAVVLFDEIEKAHNDVFNVLLQVLDDGRITDSQGRTIDFKNAV 720
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++ +L + R++V++ ++ HFRPE LNR+D+I++F L +QL
Sbjct: 721 IIMTSNIGSDAILRLGGNDAYYEQMREEVMRAMQVHFRPEFLNRVDDIIIFRNLRRDQLA 780
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ+ + RLA+R + L +++AA+D ++ YDP+YGARP++R ++ ++V L+R
Sbjct: 781 AIVKLQIARLEKRLADRKITLKLSEAAIDYIVEAGYDPVYGARPLKRAIQNELVNPLARG 840
Query: 824 LVREEIDENSTVYID 838
L++ + ++ T+++D
Sbjct: 841 LLKGDFNDGDTIFVD 855
>gi|295881966|gb|ADG56698.1| ClpB chaperone [Trypanosoma cruzi]
Length = 868
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/868 (53%), Positives = 618/868 (71%), Gaps = 27/868 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
++T+ A+ A LA + P+HLA AL D +G+ ++ + G A
Sbjct: 7 EWTNAAATALQDAVALARKHSNGFLDPVHLACALFKDENGLPSRVLKKVG-------AGI 59
Query: 65 VFNQAMKK---LPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
V + M + +P+Q+PAP + ++ + +V+ A+ + A GDT LAVD L+L L E
Sbjct: 60 VMDALMARVEAIPTQSPAPTQPHPNSDMTRVLNTAEQKRVAFGDTLLAVDHLLLALYESK 119
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ K AG V+ +++LR +G+K+ S D + AL Y D+ QA GKLD
Sbjct: 120 DTNSILKAAGADSKTVEKALKELR--KGKKITSEFQDQNYDALSKYAIDMCRQAEDGKLD 177
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
P+IGR +E+ R +R+LSRRTKNNPVLIGEPGVGKT++VEG+AQ+IVRGDVP L+ R+
Sbjct: 178 PLIGRADEVLRTIRVLSRRTKNNPVLIGEPGVGKTSIVEGIAQQIVRGDVPDTLSSSRIF 237
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+GAL+AGAKYRGEFEERLK+VL EV E+ +ILFIDE+H+VLGAG++EG+MDAANL
Sbjct: 238 SLDLGALIAGAKYRGEFEERLKSVLNEVRESPTPIILFIDEMHVVLGAGKSEGAMDAANL 297
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTLEEYRKYVEKDAAFERRF VYV EPSV + +SILRGLKE+YE
Sbjct: 298 LKPMLARGELRTIGATTLEEYRKYVEKDAAFERRFMPVYVTEPSVDECISILRGLKERYE 357
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HHGV+I D A+VVA QL+ RYITGR +PDKAIDL+DEACANVRVQL S+PEEID LERK
Sbjct: 358 THHGVQITDNAVVVAVQLADRYITGRFMPDKAIDLIDEACANVRVQLSSRPEEIDQLERK 417
Query: 420 RMQLEIELHALEKE-KDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+ QLEIE ALE++ K+K+S+ RL V+ ++ + + LQPL+ RY +E++R+DE+ ++
Sbjct: 418 KRQLEIEAKALERDKKEKSSQERLRIVKGDIQRVEELLQPLLARYNEERQRVDELHEMQT 477
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL-EGNQSDENLMLTETVGPDQI 537
+ +E L+ AER D+ AADL+Y AI ++ I L E + + M+ E V ++
Sbjct: 478 RLDEKKTKLERAERMRDMELAADLKYNAIPVIQDRIRSLKEKIEQQKASMVQEKVTEVEV 537
Query: 538 AEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQ 586
A VV+RWTGIPV +L Q ++ERL+ L+ EAV V+E++LRSRAGL RP
Sbjct: 538 AAVVARWTGIPVKKLSQTDRERLLQLSSHLHRRVKGQDEAVERVSEAILRSRAGLSRPHA 597
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
PTGSFLFLGPTGVGKTELAKA+A +LFDDE +VRIDMSEYMEQH+V+RLIGAPPGYVGH
Sbjct: 598 PTGSFLFLGPTGVGKTELAKAVAAELFDDEKHMVRIDMSEYMEQHAVARLIGAPPGYVGH 657
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTE VRRRP++VVL DEVEKAH SVFN LLQVLDDGRLTD GRTVDF N +++M
Sbjct: 658 EEGGQLTEPVRRRPHTVVLLDEVEKAHPSVFNVLLQVLDDGRLTDSHGRTVDFSNAIVVM 717
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG+EHL+ + R++V Q VR +FRPE LNRLD+IV+F L +L ++
Sbjct: 718 TSNLGSEHLVHVGNSPKGWEATREKVWQVVRSYFRPEFLNRLDDIVLFRRLGFGELHEII 777
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
L + +V RL + + L VTD A + VL +++D GARP+RRW+EK + TE+SRM++
Sbjct: 778 DLIVAEVNGRLKSQDILLEVTDEAKNFVLEKAFDAEMGARPLRRWVEKYITTEVSRMILA 837
Query: 827 EEIDENSTVYIDASPKGDNLVYRVQKNG 854
+++ NSTV + + L + V+++
Sbjct: 838 QQLPPNSTVRVLVNSSQGKLAFSVKRSS 865
>gi|220903854|ref|YP_002479166.1| ATP-dependent chaperone ClpB [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868153|gb|ACL48488.1| ATP-dependent chaperone ClpB [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 868
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/861 (54%), Positives = 620/861 (72%), Gaps = 27/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K EA++ A LA GH + HLA+AL +GI + + G + A
Sbjct: 1 MDINKFTEKAREAVSEAQSLAAGMGHQETDVEHLALALTQQENGIVPRILEQMGVQPRAL 60
Query: 61 SAERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S A++K PS + P +I + L V+ AQ K D +++VD L L
Sbjct: 61 SV--ALEGAVRKRPSVSGGGIDPTKIMITQRLATVLNDAQNEAKRMKDEYVSVDHLFAAL 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E + +G++FKE + A + +E +RG G +V SA+ + TF+AL Y RDLVE
Sbjct: 119 TEVPPSTPLGEVFKEYKITRASFVAAMEDMRG--GARVTSANPEDTFEALTKYARDLVEA 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GK+DPVIGRD EIRRV+RILSRRTKNNPVLIGE GVGKTA+VEGLA RIV+GDVP
Sbjct: 177 ARQGKMDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIVEGLAFRIVKGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L +L ALDMGAL+AGAKYRGEFEERLKAVL EVE++EG+ ILFIDE+H ++GAG+TEG
Sbjct: 237 LKGRKLFALDMGALIAGAKYRGEFEERLKAVLNEVEKSEGQTILFIDELHTIVGAGKTEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATT++EYRKY+EKD A ERRFQ V V EP+V DT+SILR
Sbjct: 297 AMDAGNLLKPMLARGELHCIGATTVDEYRKYIEKDPALERRFQPVMVEEPTVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHGVRI D A+V A LS RYIT R LPDKAIDL+DEA A +R ++DS P +
Sbjct: 357 GLKERFEVHHGVRISDSAIVEAVMLSHRYITDRQLPDKAIDLIDEAAALIRTEIDSLPAD 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D RK MQLEIE AL +E D AS+ RL ++ EL DLR + L +++ EK I++
Sbjct: 417 LDEANRKVMQLEIEREALRRETDAASRERLEKLENELADLRIEQADLRKQWESEKGSINQ 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R +K++ E+ A+++AER YDL +AA+L+Y + E+E + + E G+ ++ +L
Sbjct: 477 VREIKEQIEQTKLAIEQAERAYDLNKAAELKYSKLLELEKKLAEAENSDGSGAEGPRLLK 536
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSR 578
E V PD +AE+V +WTGIPVTRL ++E+E R++G EAVNAV+++VLR+R
Sbjct: 537 EEVRPDDVAEIVGKWTGIPVTRLLESEREKLLRLPEQLHQRVVGQDEAVNAVSDAVLRAR 596
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +PTGSF+FLGPTGVGKTEL+KALAE LFD E+ +VR+DMSEYME+HSVSRLIG
Sbjct: 597 AGLSDPDRPTGSFIFLGPTGVGKTELSKALAEALFDTEDNMVRLDMSEYMEKHSVSRLIG 656
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG++EGGQLTEAVRR+PYSV+LFDE+EKAH VFNTLLQ+LDDGRLTD QGRTVD
Sbjct: 657 APPGYVGYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNTLLQLLDDGRLTDSQGRTVD 716
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
FRN ++IMTSN+G+ HLL G+ + + AR++V++E+R HFRPE LNR+DE VVF PL
Sbjct: 717 FRNCIVIMTSNIGSMHLLDGIEADGALKEGARERVMEELRAHFRPEFLNRVDETVVFLPL 776
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+Q+ ++ LQ+ + RL +R + L +TDAA + + YDP+YGARP++R++++ V
Sbjct: 777 RRDQISRIVDLQLARLRRRLEDRKIRLDMTDAARNFIGEAGYDPVYGARPLKRYVQQAVE 836
Query: 818 TELSRMLVREEIDENSTVYID 838
T L+R +V +I + V +D
Sbjct: 837 TPLARQIVGGKIRDGQRVNVD 857
>gi|357420426|ref|YP_004933418.1| ATP-dependent chaperone ClpB [Thermovirga lienii DSM 17291]
gi|355397892|gb|AER67321.1| ATP-dependent chaperone ClpB [Thermovirga lienii DSM 17291]
Length = 870
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/873 (54%), Positives = 628/873 (71%), Gaps = 30/873 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K+ EA+A A + A GH + HL +ALL +G+ + + +
Sbjct: 1 MDMNKLTQKSQEALADAQKEAIQRGHREVDNEHLLLALLKQENGLIPRLMRKM--DVPLD 58
Query: 61 SAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ + + + PS A E I S L V+ A+ K D +++V+ L L
Sbjct: 59 AMINAVEKELARRPSIAGASLEAGKIYISGRLGAVLVAAEEKAKKLKDEYVSVEHLFSAL 118
Query: 118 LED----SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE 173
+E+ S + + GV R ++++RG + +V+SA ++T++AL+ YGRDLV
Sbjct: 119 MEEPDPSSPTRKILADFGVDEDRFFKTLQEVRGNQ--RVQSADPESTYEALEKYGRDLVA 176
Query: 174 --QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPS 231
+AGKLDPVIGRDEE+RRV+RILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP
Sbjct: 177 LARAGKLDPVIGRDEEVRRVIRILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPE 236
Query: 232 NLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTE 291
L D ++ALDMGALVAGAKYRGEFEERLKAVL EV+ +EG++ILFIDEIH ++GAGR E
Sbjct: 237 GLRDRSIVALDMGALVAGAKYRGEFEERLKAVLNEVKRSEGRIILFIDEIHTIVGAGRAE 296
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
GSMDA N+ KPMLARG+L CIGATTL+EYRKY+EKDAA ERRFQ VYV +PSV DT+SIL
Sbjct: 297 GSMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDAALERRFQPVYVDQPSVEDTISIL 356
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RGLKE++E HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEACA VR ++DS P
Sbjct: 357 RGLKERFEVHHGVRIQDNALVAAAVLSHRYITDRFLPDKAIDLVDEACAMVRTEIDSMPT 416
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
E+D + R+ MQLEIE AL+KE DKAS+ RL +RKEL + R+K L +Y+ EK+ I
Sbjct: 417 ELDTVMRRIMQLEIEEAALKKETDKASQQRLENLRKELQEAREKADALRAQYEVEKKLIS 476
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE-NLMLTE 530
E++ L+++ E++ +++AER YDL +AA+L++G + E+E + + + D +L E
Sbjct: 477 EVQSLREEIEKVKHEIEKAEREYDLNKAAELKHGKLPELEMKLQEAQKRLEDSGQRLLRE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRA 579
V ++IA+VVS WTGIPV+RL + E+E R++G EAV VA++VLR+R+
Sbjct: 537 EVTEEEIAKVVSMWTGIPVSRLMEGEREKLLRLEEVLHQRVVGQDEAVKLVADAVLRARS 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAK LAE LFD E+ L+RIDMSEYME+H+VSRLIGA
Sbjct: 597 GIKDPRRPIGSFIFLGPTGVGKTELAKTLAEALFDSEDNLIRIDMSEYMEKHAVSRLIGA 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTE VRR+PYSV+LFDE+EKAH VFN LLQVLDDGRLTD GRTVDF
Sbjct: 657 PPGYVGYEEGGQLTERVRRKPYSVILFDEIEKAHQDVFNILLQVLDDGRLTDSHGRTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
RNT+IIMTSN+GA L+ G+ G++T + AR++V +++R HFRPE LNR+D++V+F PL
Sbjct: 717 RNTIIIMTSNIGATALMEGITESGEITEE-ARNEVTRQLRLHFRPEFLNRVDDVVLFKPL 775
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
E+L K+ L D+ RL ER V L +T A + E DP+YGARP++R++ ++
Sbjct: 776 RQEELVKIVDLLTADLKERLQERSVTLELTQEAKTFIAREGSDPVYGARPLKRFIAHELE 835
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRV 850
T+++RM+++ E+ E S + +D+ G+ L + V
Sbjct: 836 TKIARMILKGELCEGSKLTVDSD--GEKLTFSV 866
>gi|258405978|ref|YP_003198720.1| ATP-dependent chaperone ClpB [Desulfohalobium retbaense DSM 5692]
gi|257798205|gb|ACV69142.1| ATP-dependent chaperone ClpB [Desulfohalobium retbaense DSM 5692]
Length = 866
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/863 (53%), Positives = 618/863 (71%), Gaps = 29/863 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ EAI+ A + H Q H+A+AL G+ + + G +
Sbjct: 1 MDLNKFTQKSQEAISEAQNIGVRHSHQQIDAEHVALALAEQEDGLIPRLLERLGKDPKNY 60
Query: 61 SAERVFNQAMKKLPSQTPAPD----EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILG 116
A +KK+P Q P +I + L +V+ ++Q K D +++V+ + L
Sbjct: 61 IA--ALEAELKKVP-QVSGPGAQQGQIYVTQRLNQVLVKSQDMAKKMQDDYVSVEHIFLA 117
Query: 117 LLEDSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE 173
LLE+S +G + K+ G+ V + +RG + +V S++ + T+ ALK YGRDLV+
Sbjct: 118 LLEESASSGVGRVHKQFGLDKDTVLQALTDVRGHQ--RVTSSNPEGTYDALKKYGRDLVD 175
Query: 174 QA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPS 231
A G+LDPVIGRD EIRRV+RILSRRTKNNPVLIGE GVGKTA+ EGLAQRI+ DVP
Sbjct: 176 DARKGRLDPVIGRDTEIRRVIRILSRRTKNNPVLIGEAGVGKTAIAEGLAQRILNQDVPE 235
Query: 232 NLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTE 291
L + ALDMGAL+AGAKYRGEFEERLKAVLKEV+E+EG++I+FIDE+H ++GAG+ E
Sbjct: 236 GLKHKTVFALDMGALLAGAKYRGEFEERLKAVLKEVQESEGQIIMFIDEMHTIVGAGKAE 295
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
G+MDA NL KPMLARG+L CIGATTL+EYRK +EKD A ERRFQ V V EP + DT+SIL
Sbjct: 296 GAMDAGNLLKPMLARGELHCIGATTLDEYRKNIEKDPALERRFQPVMVEEPDLEDTISIL 355
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RGL+E++E HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA A +R ++DS P
Sbjct: 356 RGLRERFEVHHGVRIADAALVTAATLSHRYITDRQLPDKAIDLVDEAAAMIRTEIDSLPT 415
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
++D + R+ MQLEIE AL++EKD+ASK RL + KEL D ++K L+ +++KEKE I+
Sbjct: 416 DLDEINRRIMQLEIEREALKREKDEASKERLERLEKELADQKEKQTTLLAQWEKEKEGIN 475
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN---LML 528
E+R LK++ E+ ++EAER YDL +AA+LRYG + E+E I + E +Q + +L
Sbjct: 476 ELRSLKEELEKTRRDIEEAERNYDLNKAAELRYGKLNELERKIAERERSQDEAGESPQLL 535
Query: 529 TETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRS 577
E VG D +AE++SRWT IP++RL G+ EK ER++G EAV AVA++VLR+
Sbjct: 536 KEEVGADDVAEIISRWTRIPLSRLLEGEREKLLRLGDVLHERVVGQDEAVEAVADAVLRA 595
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGL P++P GSF+FLGPTGVGKTEL K LAE LFD E ++R+DMSEYME+H+ +RLI
Sbjct: 596 RAGLKDPRRPIGSFIFLGPTGVGKTELCKTLAESLFDSEENMIRLDMSEYMEKHTTARLI 655
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFNTLLQ+LDDGRLTD GRTV
Sbjct: 656 GAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHADVFNTLLQILDDGRLTDSHGRTV 715
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
DF+NT+IIMTSNLG+E +L G+ G+ + AR QV+ +R FRPE LNR+DEIV+F P
Sbjct: 716 DFKNTIIIMTSNLGSEFMLEGISGEGELTDTARSQVMNTLRGSFRPEFLNRVDEIVMFTP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L+ EQ++++ LQM+ + RL +R + L +T+ A +++ E+YDP+YGARP+RR+L+ +
Sbjct: 776 LTREQIKEIIGLQMQQLHTRLEDRKITLELTENARELIAREAYDPVYGARPLRRFLQTHI 835
Query: 817 VTELSRMLVREEIDENSTVYIDA 839
T L++ L+ + E V +D
Sbjct: 836 ETPLAKQLIGGHLKEGQHVVVDG 858
>gi|317051424|ref|YP_004112540.1| ATP-dependent chaperone ClpB [Desulfurispirillum indicum S5]
gi|316946508|gb|ADU65984.1| ATP-dependent chaperone ClpB [Desulfurispirillum indicum S5]
Length = 862
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/873 (52%), Positives = 619/873 (70%), Gaps = 35/873 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFTHK EAI AH A +A H Q PLHL AL G I+ G A
Sbjct: 1 MDLNKFTHKAAEAIQDAHNRALTASHQQILPLHLLAALTQQSGGTIPALISKLGVNINAL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ Q + +LP + + ++ S L K++ A+ QK + D+ ++V+ L L L++
Sbjct: 61 YTD--IEQQLNRLPQVSGSGAQVYLSQELAKLLAFAEKIQKEYSDSFISVEHLFLSLIQH 118
Query: 121 --SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
S + ++ + + +V + LRGK+ V++ + TF AL+ YGRDLV A G
Sbjct: 119 GGSAVDEILRRFQLEQKKVTEAISALRGKQ--HVDTQDPEGTFNALEKYGRDLVRAARDG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR VRILSRRTKNNPVLIGEPGVGKTA+VEGLA RIV DVP L +
Sbjct: 177 KLDPVIGRDEEIRRAVRILSRRTKNNPVLIGEPGVGKTAIVEGLAHRIVNSDVPEGLKEK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMGAL+AGAKYRGEFEERLKAVLKEV E+ G++ILFIDE+H ++GAG++EG+MDA
Sbjct: 237 MIFSLDMGALIAGAKYRGEFEERLKAVLKEVSESSGRIILFIDELHTIVGAGKSEGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KPMLARG+LRCIGATTL+EYRK++EKD A ERRFQ + V EP+V DT+SILRGLKE
Sbjct: 297 GNLLKPMLARGELRCIGATTLDEYRKHIEKDPALERRFQPIQVQEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
K+E HHGV I D A+V AA LS RYIT R LPDKAIDLVDEA A VR ++DS P E+D L
Sbjct: 357 KFEIHHGVTIHDHAIVAAATLSDRYITDRFLPDKAIDLVDEAAAMVRTEIDSSPAEMDTL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
R+ MQLEIE AL++EKD+AS+ RL ++ +EL D+R+ + R++ EK+ I ++ +
Sbjct: 417 YRRIMQLEIEQEALKREKDRASQERLEKLSQELADVRESYNAMKTRWEMEKQAIGGLQHI 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE---NLMLTETVG 533
K++ E ++ +R Y+L + A+L+YG + E+E + + E Q + +L E V
Sbjct: 477 KEEIERTRHEIERYQREYNLEKVAELKYGRLTELEKKLQEAEEYQKTRDRGDSLLKEEVT 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
+IA +V+RWTGIPVT+L + EKE R+IG EAV++V ++V+R+R G+
Sbjct: 537 ESEIAAIVARWTGIPVTKLVEGEKEKVLRLGETLHQRVIGQDEAVDSVVDAVIRARGGIQ 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTELA++LAE LFD E ++RIDMSEYME+H+VSRLIGAPPG
Sbjct: 597 DPDRPLGSFIFLGPTGVGKTELARSLAEALFDSEENMIRIDMSEYMEKHAVSRLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGRLTD GRTV+FRNT
Sbjct: 657 YVGYDEGGQLTEAVRRKPYSVLLFDEIEKAHADVFNLLLQLLDDGRLTDSHGRTVNFRNT 716
Query: 703 VIIMTSNLGAEHLL------SGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
VIIMTSN+G+ LL SG+ G V R QV +E+R HFRPE LNR+DE ++F+P
Sbjct: 717 VIIMTSNIGSHLLLDAAISGSGITGDV-----RQQVTRELRHHFRPEFLNRVDETIIFEP 771
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
LS +Q++++ +LQ+ + RLAE+ + + +T++AL+ +SY+P YGARP++R+L++ +
Sbjct: 772 LSVDQVKQIVKLQVIRLNRRLAEQFIHVELTESALEFFARKSYEPQYGARPVKRYLQRNL 831
Query: 817 VTELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
T L+R ++ EI E V++D +GD L++R
Sbjct: 832 ETPLARKIIAGEIREEQEVHVDV--EGDQLIFR 862
>gi|443325328|ref|ZP_21054028.1| ATP-dependent chaperone ClpB [Xenococcus sp. PCC 7305]
gi|442795057|gb|ELS04444.1| ATP-dependent chaperone ClpB [Xenococcus sp. PCC 7305]
Length = 871
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/858 (52%), Positives = 622/858 (72%), Gaps = 29/858 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP +FT K +A+ ++A H Q HL ALL + G+ +N A S
Sbjct: 5 NPQQFTEKAWQAVVKTADIAKQNKHQQIESEHLLKALLEE-EGLTTSILNKAD-----IS 58
Query: 62 AERVFNQAMKKLPSQTPAP---DEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+V ++ + + SQ D I +L +++ R++ +K D +++++ LIL
Sbjct: 59 VSQVRDKVDRFIDSQAKVKNLGDSIYLGRSLDRLLDRSEKFRKEFEDEYISIEHLILSYA 118
Query: 119 EDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D +IG D+F+E + ++K V+++RG + KV + + +QAL+ YGR+L E A
Sbjct: 119 KDDRIGKDIFREFNLTEKKLKEIVKQVRGNQ--KVTDQNPEGKYQALEKYGRELTELAKK 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV DVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNRDVPESLRD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L+ALDMGAL+AGAKYRGEFEERLKAVLKEV E+EG +I+FIDEIH V+GAG T+GSMD
Sbjct: 237 RKLVALDMGALIAGAKYRGEFEERLKAVLKEVTESEGNIIMFIDEIHTVVGAGATQGSMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ V V EP+V DT+SILRGLK
Sbjct: 297 AGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQSVLVDEPNVVDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGV+I D A+V AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D
Sbjct: 357 ERYEVHHGVKISDTAVVAAATLSTRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +L+KE DK S+ RL + KEL +L+++ L +++ EK+ I ++
Sbjct: 417 IDRKILQLEMERLSLQKEADKLSQERLERLEKELANLKEEQSELNAQWQAEKDVIGKLNN 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI----GQLEGNQSDENLMLTET 531
K++ + + +Q+AER YDL +AA+LRYG + +++ I +LE QS +L E
Sbjct: 477 FKEEIDRVNLEIQQAERDYDLNKAAELRYGKLTDLQRQIKEIESKLEETQSTGRNLLREE 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAG 580
V IAE++S+WTGIP+ +L Q+EK ER+IG +EAV AVA+++ RSRAG
Sbjct: 537 VTESDIAEIISKWTGIPLNKLVQSEKDKILLLEDELHERVIGQSEAVTAVADAIQRSRAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +PT SF+FLGPTGVGKTELAKALA+ LFD E+ LVRIDMSEYME+H+VSRL+GAP
Sbjct: 597 LADPDRPTASFIFLGPTGVGKTELAKALAKNLFDSEDALVRIDMSEYMEKHNVSRLVGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QGRTVDF+
Sbjct: 657 PGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNIMLQILDDGRLTDSQGRTVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
N++IIMTSN+G++H+L + R +V+ ++ FRPE LNR+DEI++F L+ E
Sbjct: 717 NSIIIMTSNIGSQHILDVAGDDSKYEEMRSRVMGAMQDSFRPEFLNRIDEIIIFHSLTKE 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
QL+ + +LQ++ + RLAE+ +AL ++DAA+D + YDP+YGARP++R +++ + T +
Sbjct: 777 QLQPIVKLQVQALEKRLAEQKLALKLSDAAVDFLSELGYDPVYGARPLKRAIQRYLETAI 836
Query: 821 SRMLVREEIDENSTVYID 838
++ ++R E T+++D
Sbjct: 837 AKAILRGEFQGGDTIFVD 854
>gi|340052512|emb|CCC46793.1| ATP-dependent Clp protease subunit, heat shock protein 100 (HSP100)
[Trypanosoma vivax Y486]
Length = 867
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/860 (53%), Positives = 607/860 (70%), Gaps = 23/860 (2%)
Query: 10 TNEAIAMAHE---LATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAERVF 66
TN A A+ E LA+ + P HLA+AL + + + + + G A + F
Sbjct: 7 TNAAAAVLQEASALASRYRNGCIHPAHLALALFQEENDLPSLVLRKLG----AGVVKVGF 62
Query: 67 NQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGDL 126
+ +LP Q P P+ + + A+ + GDT LA+D L L L ++ ++
Sbjct: 63 MGLVDRLPKQEPPPNRPNPGVEMTGTLNMAEQHRVQLGDTLLALDHLFLALYSCKEVAEI 122
Query: 127 FKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGR 184
AG + RV+ E++ LR G+K+ S + D + L Y DL QA GKLDPVIGR
Sbjct: 123 LNAAGAPMKRVEKEIKDLR--RGKKITSETQDQNYDCLSKYAVDLCAQAESGKLDPVIGR 180
Query: 185 DEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMG 244
+EI R +R+LSRRTKNNPVLIGEPGVGKTA+VEG+AQRIV GDVP L DVR+ +LD+G
Sbjct: 181 TDEIMRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQRIVLGDVPDTLKDVRVFSLDLG 240
Query: 245 ALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPML 304
+L+AGAKYRGEFEERLK +L EV+E + +ILFIDEIHLVLGAG+T G+MDAANL KPML
Sbjct: 241 SLIAGAKYRGEFEERLKNLLNEVKENQEGIILFIDEIHLVLGAGQTSGAMDAANLLKPML 300
Query: 305 ARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGV 364
ARG+LR IGATTLEEYRKYVEKDAAFERRF V+V+EPSV D +SILRGLK++YE HHGV
Sbjct: 301 ARGELRTIGATTLEEYRKYVEKDAAFERRFMPVHVSEPSVEDCISILRGLKDRYETHHGV 360
Query: 365 RIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLE 424
+I D A+VVAAQL+ RYIT R +PDKAIDLVDEACAN+RVQL S+PE+ID LERK+ QLE
Sbjct: 361 QITDNAIVVAAQLADRYITSRFMPDKAIDLVDEACANIRVQLSSRPEQIDMLERKKQQLE 420
Query: 425 IELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREELL 484
IE ALE++ +KAS+ RL V+ EL ++++LQPL+ RY E+++++E+R L+ + +E
Sbjct: 421 IEAKALERDGEKASRERLKFVKAELQRVKEELQPLVNRYDTERQQLNELRELQTRLDEKK 480
Query: 485 FALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD-QIAEVVSR 543
L A+R D+ RAADL Y I +++ I + N + + +T D IA VV+R
Sbjct: 481 NKLSCAQRSGDMDRAADLMYIVIPDIQERIRSAKENIEKQKAAMVQTKVTDVDIATVVAR 540
Query: 544 WTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPTGSFL 592
WTGIPV++L Q ++ERL+ L EAV V+++++R+RAGL RP PT SFL
Sbjct: 541 WTGIPVSKLSQTDRERLLNLPAHLHRRIKGQDEAVKRVSDAIIRARAGLSRPNSPTASFL 600
Query: 593 FLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQL 652
FLGPTGVGKTELAKA+A +LFDDE +VRIDMSEYMEQHSVSRL+GAPPGYVGHE+GGQL
Sbjct: 601 FLGPTGVGKTELAKAVASELFDDEKHMVRIDMSEYMEQHSVSRLVGAPPGYVGHEDGGQL 660
Query: 653 TEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGA 712
TE VRRRP++V+LFDEVEKAH SV+N LLQVLDDGRLTD GRTVDF NT+IIMTSNLG
Sbjct: 661 TEPVRRRPHTVLLFDEVEKAHASVYNVLLQVLDDGRLTDSHGRTVDFSNTIIIMTSNLGW 720
Query: 713 EHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKD 772
E+ G+ T ++ R +VL+EV+K FRPE +NRLD+IV+F L+ +L V L + +
Sbjct: 721 EYFAELDGGQETYELVRAKVLREVQKFFRPEFINRLDDIVLFRRLNRVELHGVVELLLNE 780
Query: 773 VAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDEN 832
+ RL G+ L+ T+ + VL +YDP GARPIRRW++K + TE+SRM++ +++ N
Sbjct: 781 LNERLNSTGIGLSFTEEVRNFVLDAAYDPEMGARPIRRWIDKNITTEVSRMIIGDKLPPN 840
Query: 833 STVYIDASPKGDNLVYRVQK 852
S V I + L + V++
Sbjct: 841 SNVQISLNADSGKLTFGVKR 860
>gi|118588511|ref|ZP_01545920.1| endopeptidase Clp ATP-binding chain B, clpB [Stappia aggregata IAM
12614]
gi|118439217|gb|EAV45849.1| endopeptidase Clp ATP-binding chain B, clpB [Stappia aggregata IAM
12614]
Length = 865
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/866 (53%), Positives = 614/866 (70%), Gaps = 23/866 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + + A A GH QF P H+ LL D G+ + I+ AGG A
Sbjct: 1 MNFEKYTERARGFVQSAQTFALGRGHQQFAPEHILKVLLDDQEGMASGLIDRAGGNAKAL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ + K+P + ++ ++ +A+ GD+ + V++L+L L D
Sbjct: 61 KGD--LEGLLDKMPKVSGGSGQLYMGQATARLFEQAEKIADKAGDSFVTVERLLLALAMD 118
Query: 121 S--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ + G L K G+ + + +LR +GR ++A+ + + ALK + RDL + A G
Sbjct: 119 TDGETGKLMKRHGITPNALNEAINQLR--QGRTADTATAENQYDALKKFARDLTQVAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMG+L+AGAKYRGEFEERLK VL EV+ A GKVILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 QLLALDMGSLIAGAKYRGEFEERLKGVLSEVQAAAGKVILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D A+V AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D L
Sbjct: 357 KYELHHGVRITDSAIVSAASLSNRYITDRFLPDKAIDLVDEAASRLRIQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL+ E D ASK RL + KEL DL +K Q L R++ EKE++ +++
Sbjct: 417 DRRIIQLKIEREALKAESDDASKDRLSRLEKELSDLEEKSQALSNRWQGEKEKLHLEQKI 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ E+ L+ A+RR DLA+A +L YG + E+E + + E ++ D + M+ E V P
Sbjct: 477 KEQLEQARIDLEIAQRRGDLAKAGELAYGVVPELERKLAEAEASE-DADAMVDEAVTPAH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA+VVS+WTGIPV ++ + E+E+L IG AEA++AV+ +V R+RAGL P
Sbjct: 536 IAQVVSKWTGIPVDKMLEGEREKLLQMEDMLANRVIGQAEAIHAVSTAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDD++ +VRIDMSEYME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFMFLGPTGVGKTELTKALASFLFDDDSAMVRIDMSEYMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 656 YEEGGALTEAVRRRPYQVVLFDEIEKAHSDVFNVLLQVLDDGRLTDGQGRTVDFRNTLII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ G+ T V RD+V+ VR HFRPE LNRLDEIV+F L Q+ +
Sbjct: 716 MTSNLGAEYLVNQAEGQDTDAV-RDEVMSAVRGHFRPEFLNRLDEIVLFHRLQRSQMADI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
++Q++ + L++R + L + D AL + + YDP YGARP++R ++K+V L+ L+
Sbjct: 775 VKIQLERLRALLSDRKITLKLDDGALGWLAQKGYDPAYGARPLKRVIQKEVQDPLAEKLL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYRVQ 851
EI + T+ + A D L+++V+
Sbjct: 835 AGEILDGQTIEVSAGS--DRLMFQVE 858
>gi|119486634|ref|ZP_01620684.1| ATPase [Lyngbya sp. PCC 8106]
gi|119456251|gb|EAW37383.1| ATPase [Lyngbya sp. PCC 8106]
Length = 873
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/855 (52%), Positives = 628/855 (73%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
+P KFT K+ EA+A ELA A Q HL +LL + +G+ + AG + +A
Sbjct: 5 DPSKFTEKSWEALAQTPELAKQAQQQQLESEHLMKSLL-EQTGLASSLFTKAGVDISALR 63
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
ERV + + + P + I +L ++ A+A +K + D +++++ L+L +D
Sbjct: 64 -ERV-DTFINRQPQVKGSSTNIYLGRSLDLLLDNAEAYRKEYSDEYISIEHLLLAYTKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G L++E + A++K + ++RG + KV + + +Q+L+ YGRDL E A GKL
Sbjct: 122 RFGKSLYQEFKLDEAKLKKTITQVRGNQ--KVTDQNPEGKYQSLEKYGRDLTEAARQGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GD+P +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDIPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKEV E+EGK+ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEVTESEGKIILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVY+ +P+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYIDQPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D +LV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKISDSSLVAAATLSTRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS RL ++ K+L DL++ L ++ EK I I+ +K+
Sbjct: 420 KILQLEMERLSLQKESDPASIERLEKIEKDLADLKEDQHALNAQWDAEKSVITNIQSIKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG + E ++ A +LE Q+ +L E V
Sbjct: 480 EIDRVSIEVQQAERNYDLNRAAELKYGKLSELQKQLQVAETKLETTQTSGKTLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L +G EAV AVAE++ RSRAGLG
Sbjct: 540 ADIAEIISKWTGIPISKLVESEKEKLLNLDSELHQRVVGQEEAVTAVAEAIQRSRAGLGD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P++P SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PKRPVASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QG TVDF+N+V
Sbjct: 660 VGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDAQGHTVDFKNSV 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + + +V++ +R FRPE LNR+DEI++F L +QL+
Sbjct: 720 IIMTSNIGSQYILDIVGDDSRYEEMQGRVMETMRASFRPEFLNRIDEIIIFHALQRQQLQ 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
K+ +LQ++ + RLAER ++L +TDAA+ + +DP+YGARP++R +++++ T++++
Sbjct: 780 KIVQLQIQHLVERLAERKMSLKLTDAAVSFLADVGFDPVYGARPLKRAIQRELETQIAKG 839
Query: 824 LVREEIDENSTVYID 838
++R E ++ T+++D
Sbjct: 840 ILRGEFNDGDTIFVD 854
>gi|307942493|ref|ZP_07657842.1| ATP-dependent chaperone protein ClpB [Roseibium sp. TrichSKD4]
gi|307774314|gb|EFO33526.1| ATP-dependent chaperone protein ClpB [Roseibium sp. TrichSKD4]
Length = 865
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/865 (53%), Positives = 617/865 (71%), Gaps = 23/865 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A GH QFTP H+ LL D G+ A + AGG+ Q
Sbjct: 1 MNFEKYTERARGFIQSAQTFALGQGHQQFTPEHILKVLLDDAEGMSAGLVAKAGGD--VQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ A+ K+P + ++ S ++ +A+ + GD+++ V++ +L L+ D
Sbjct: 59 MLRQGIENALSKMPKVSGGAGQLYLSQATARLFEQAEKIAEKAGDSYVTVERFLLALVMD 118
Query: 121 --SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
S+ G L K+AG+ V + LR +GR +SA+ + + ALK Y RDL E A G
Sbjct: 119 AESEAGKLLKQAGLTPNSVNEAINALR--QGRTADSATAENQYDALKKYARDLTEVARDG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR V++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTVQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLK+VL EVE A G +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 QLLALDMGALIAGAKYRGEFEERLKSVLSEVEAAAGGIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRK+VEKDAA RRFQ V+V+EP+V DTVSILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D A+V AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D L
Sbjct: 357 KYELHHGVRITDTAIVSAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL+ E D A++ RL ++ KEL DL ++ L R++ EKE+++ +++
Sbjct: 417 DRRIIQLKIEREALKAEDDTATQDRLAKLEKELSDLEEQSDALTARWQSEKEKLNLEQKI 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ E+ LQ A+R+ DLARA +L YGAI ++E + E + + M+ E V
Sbjct: 477 KEQLEQARTDLQIAQRQGDLARAGELAYGAIPDLERKLKDAEETEQG-DAMVDEAVTSSH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+VVS+WTGIPV ++ + E+E+L +G AEA++AV+ +V R+RAGL P
Sbjct: 536 VAQVVSKWTGIPVDKMLEGEREKLLRMEDVLANRVVGQAEAISAVSTAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDD+ +VR+DMSEYME+HSV+RLIGAPPGYVG
Sbjct: 596 RPIGSFMFLGPTGVGKTELTKALASFLFDDDTAMVRVDMSEYMEKHSVARLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 656 YDEGGALTEAVRRRPYQVVLFDEIEKAHADVFNVLLQVLDDGRLTDGQGRTVDFRNTLII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ G+ + V RDQV+ VR HFRPE LNRLDEIV+F L Q+ +
Sbjct: 716 MTSNLGAEYLVNQPEGEDSDAV-RDQVMTSVRGHFRPEFLNRLDEIVLFHRLQRAQMGDI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
++Q++ + LA+R + L++ +AAL + + YDP YGARP++R ++K+V L+ L+
Sbjct: 775 VKIQLERLRGLLADRKIDLSLDEAALSWLAQKGYDPAYGARPLKRVIQKEVQDPLAEKLL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYRV 850
+I + +V + A D L++ V
Sbjct: 835 AGDILDGQSVSVTAGT--DRLLFSV 857
>gi|46580283|ref|YP_011091.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Desulfovibrio
vulgaris str. Hildenborough]
gi|387153291|ref|YP_005702227.1| ATP-dependent chaperone ClpB [Desulfovibrio vulgaris RCH1]
gi|54035770|sp|Q72AW6.1|CLPB_DESVH RecName: Full=Chaperone protein ClpB
gi|46449700|gb|AAS96350.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Desulfovibrio
vulgaris str. Hildenborough]
gi|311233735|gb|ADP86589.1| ATP-dependent chaperone ClpB [Desulfovibrio vulgaris RCH1]
Length = 865
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/875 (53%), Positives = 626/875 (71%), Gaps = 34/875 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT K+ +A+A A +A GH + HLA AL+ G+ + ++ G + A
Sbjct: 1 MDIGKFTEKSQQALAEAQNIAVRFGHQEVDAEHLADALVRQEQGLVPRLLDRMGQKPEA- 59
Query: 61 SAERVFNQAMKKLPSQTPA-------PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQL 113
F +A+++ + PA P +I S L V+ +AQ + D +++V+ +
Sbjct: 60 -----FAEALERELGKRPAVSGPGAAPGQIFVSKRLNAVLVKAQDFARQLKDEYVSVEHI 114
Query: 114 ILGLLED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRD 170
LLE+ + +G + +E ++ +V +E +RG + +V SA+ + T++AL+ YGRD
Sbjct: 115 FCVLLEEPASTIMGRIAREFSLSREKVLGVLEDVRGSQ--RVTSANPEDTYEALQKYGRD 172
Query: 171 LVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD 228
LVE+A GKLDPVIGRD EIRRV+RILSRRTKNNPVLIGE GVGKTA+VEGLA RI++GD
Sbjct: 173 LVEEARKGKLDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIVEGLAHRILKGD 232
Query: 229 VPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAG 288
VP L + L ALDMGAL+AGAKYRGEFEERLKAVLKEVE++EG++I+FIDE+H ++GAG
Sbjct: 233 VPEGLKERGLFALDMGALIAGAKYRGEFEERLKAVLKEVEKSEGRIIMFIDELHTIVGAG 292
Query: 289 RTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTV 348
+T+G+MDA+NL KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EP++ D +
Sbjct: 293 KTDGAMDASNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVDEPTIEDAI 352
Query: 349 SILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDS 408
SILRGLKE++E HHGVRI D A+V A LS RYIT R LPDKAIDL+DEA A +R ++DS
Sbjct: 353 SILRGLKERFEVHHGVRISDSAIVEAVTLSHRYITDRQLPDKAIDLIDEAAALIRTEIDS 412
Query: 409 QPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKE 468
P ++D RK MQLEIE AL +E D AS+ RL + EL DLR + L+ ++++EK
Sbjct: 413 LPADLDEANRKIMQLEIEREALRRETDVASRERLERLENELADLRAEQTALLSQWEREKG 472
Query: 469 RIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLML 528
ID +R +K+ E A++EAER YDL RAA+L+Y + E+E + E DE +L
Sbjct: 473 SIDHVRSIKEDIERTRHAIEEAERAYDLNRAAELKYSRLLELERQLESAEKGGHDETRLL 532
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRS 577
E V PD IAE+V+RWTGIPVTRL ++E+E+L+ LA EAV+AV+E+VLR+
Sbjct: 533 KEEVRPDDIAEIVARWTGIPVTRLLESEREKLLRLADVLHERVVGQEEAVDAVSEAVLRA 592
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGL P +P GSF+FLGPTGVGKTEL K LAE LFD E +VR+DMSEYME+H+V+RLI
Sbjct: 593 RAGLSDPSRPIGSFIFLGPTGVGKTELCKTLAEALFDTEENIVRLDMSEYMEKHAVARLI 652
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFNTLLQ+LDDGRLTD GRTV
Sbjct: 653 GAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTDSHGRTV 712
Query: 698 DFRNTVIIMTSNLGAEHLLSGMM-GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
DFRNT+IIMTSN+G+ ++L G+ G + R++V++E+R+HFRPE LNR+DE V+F P
Sbjct: 713 DFRNTIIIMTSNIGSPYMLDGISEGGEFLSGVREKVMEELRRHFRPEFLNRVDETVLFKP 772
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L Q+ ++ L + + RLAER + + + D A D + +YDP+YGARP+RR+L+ +
Sbjct: 773 LLPAQIARIVELLLGRLRGRLAERKIDIRLGDVARDFIAKAAYDPVYGARPLRRYLQHNI 832
Query: 817 VTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T L+R L+ E+ + +TV +D D L +R++
Sbjct: 833 ETPLARKLIAGELRDGTTVEVDVV--DDALSFRIE 865
>gi|75812792|ref|YP_320409.1| ATPase [Anabaena variabilis ATCC 29413]
gi|75705548|gb|ABA25220.1| ATPase [Anabaena variabilis ATCC 29413]
Length = 873
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/854 (53%), Positives = 626/854 (73%), Gaps = 22/854 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EA+ E+A H Q HL +ALL A +I N G N +
Sbjct: 5 NPEQFTEKAWEALVRTPEIAKQFQHQQIESEHLMLALLEQEG--LASSIFNKAGVNVQKL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
ER + ++ + + +L +++ RA+ +K GD +++++ LIL +D
Sbjct: 63 HERTIDFINRQPKVSGASSGSVYIGHSLERLLDRAEQYRKEFGDEYISIEHLILAFAKDD 122
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E G+ ++++ ++++RG + KV + + ++AL+ YGR+L + A G L
Sbjct: 123 RFGKGLFQEFGLDEKKLRNIIQQIRGSQ--KVTDQNPEVKYEALEKYGRNLTQLAREGIL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D +L
Sbjct: 181 DPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSGDVPESLRDRKL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFEERLKAVLKE++EA+G+++LFIDEIH V+GAG T+GSMDA+N
Sbjct: 241 IALDMGALIAGAKYRGEFEERLKAVLKEIQEAQGQIVLFIDEIHTVVGAGATQGSMDASN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLKE+Y
Sbjct: 301 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LSARYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 361 ELHHGVKISDSALVAAATLSARYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + +EL +L+++ L +++ EK+ ID IR+++Q
Sbjct: 421 KILQLEMERLSLQKETDSASRERLERLERELAELKERQDALNAQWQAEKQIIDRIRQIRQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTETVGP 534
+ E + +Q+AER YDL RAA+L+Y + E +E A +L Q+ +L E V
Sbjct: 481 EIERVNVEIQQAERDYDLNRAAELKYSKLTELQRQLEEAEARLAQIQTSGKSLLREEVTE 540
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
I E++S+WTGIPV+RL ++E + R+IG EAV AVA+++ RSRAGL
Sbjct: 541 ADIDEIISKWTGIPVSRLVESEMQKLLHLEEELHKRVIGQDEAVRAVADAIQRSRAGLAD 600
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E+ LVRIDMSEYME+H+V+RLIGAPPGY
Sbjct: 601 PNRPIASFIFLGPTGVGKTELAKALAVYLFDTEDALVRIDMSEYMEKHTVARLIGAPPGY 660
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTD QGRTVDF+NT+
Sbjct: 661 VGYEEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRLTDSQGRTVDFKNTI 720
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IMTSN+G+ ++L + RD+V++ VR+ FRPE LNR+DEI++F L ++LR
Sbjct: 721 AIMTSNIGSIYILDVAGDDSKYEQMRDRVMEAVRESFRPEFLNRIDEIIIFHSLRKDELR 780
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ++ + RL ER ++L ++D AL+ ++ YDP+YGARP++R +++++ T +++
Sbjct: 781 EIVKLQVQRLEERLRERKLSLKISDEALNWIVQVGYDPVYGARPLKRAIQRELETPIAKA 840
Query: 824 LVREEIDENSTVYI 837
++R E E T+Y+
Sbjct: 841 ILRGEFHEGDTIYV 854
>gi|428201915|ref|YP_007080504.1| ATP-dependent chaperone ClpB [Pleurocapsa sp. PCC 7327]
gi|427979347|gb|AFY76947.1| ATP-dependent chaperone ClpB [Pleurocapsa sp. PCC 7327]
Length = 871
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/855 (53%), Positives = 621/855 (72%), Gaps = 24/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAI ++A Q HL +LL A +I N N +
Sbjct: 5 NPNQFTEKAWEAIVRTIDIAKQNKQQQIETEHLMKSLLEQEG--LATSIFNKANVNVQRL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
ER ++ +++ P D + L ++ RA+A +K GD +++++ LIL +D+
Sbjct: 63 RERT-DEFIRRQPKVANIGD-VYLGRGLDSLMDRAEAFRKEFGDDYISIEHLILAYAKDA 120
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G L++E G+ ++K + ++RG + KV + + +++L+ YGRDL + A GKL
Sbjct: 121 RFGRALYQEFGLNENKLKEIINQVRGSQ--KVTDQNPENKYESLEKYGRDLTQLAREGKL 178
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D +L
Sbjct: 179 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLRDRKL 238
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFEERLKAVLKEV E+ G +ILFIDEIH V+GAG T+G+MDA N
Sbjct: 239 IALDMGALIAGAKYRGEFEERLKAVLKEVTESGGNIILFIDEIHTVVGAGATQGAMDAGN 298
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ VYV EPSV DT+SILRGLKE+Y
Sbjct: 299 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQSVYVDEPSVEDTISILRGLKERY 358
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D +LV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 359 EVHHGVKISDSSLVAAAVLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVDR 418
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D+AS+ARL ++ KEL DL+++ L +++ EKE ID+IR LK+
Sbjct: 419 KILQLEMERLSLQKEFDEASRARLEKLEKELADLKEEQANLNAQWQSEKEVIDKIRTLKE 478
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+++ +Q+AER YDL RAA+LRYG + ++++ A QL Q+ +L E V
Sbjct: 479 IIDQVNLEIQQAERDYDLNRAAELRYGKLTDLQRQIKEAESQLAQRQTTGKSLLREEVTE 538
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIPV++L ++EKE R+IG EAV AVAE++ RSRAGL
Sbjct: 539 SDIAEIISKWTGIPVSKLVESEKEKLLHLEDELHQRVIGQDEAVTAVAEAIQRSRAGLAD 598
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 599 PNRPTASFIFLGPTGVGKTELAKALAASLFDTEEAMVRIDMSEYMEKHSVSRLMGAPPGY 658
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 659 VGYEEGGQLTEAIRRRPYSVILFDEIEKAHADVFNVMLQILDDGRLTDSQGHVVDFKNTI 718
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + R +V+ +R FRPE LNR+DEI++F L +LR
Sbjct: 719 IIMTSNIGSQYILDLAGDESRYEEMRSRVMDAMRSSFRPEFLNRIDEIIIFHGLQKHELR 778
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ++ + RL E+ ++L +++AA+D + YDP++GARP++R +++ + T +++
Sbjct: 779 QIVKLQVERLEQRLTEQKLSLKLSEAAIDFLAEIGYDPVFGARPLKRAIQRYLETAIAKA 838
Query: 824 LVREEIDENSTVYID 838
++R E T+++D
Sbjct: 839 ILRGEFKPGDTIFVD 853
>gi|428306875|ref|YP_007143700.1| ATP-dependent chaperone ClpB [Crinalium epipsammum PCC 9333]
gi|428248410|gb|AFZ14190.1| ATP-dependent chaperone ClpB [Crinalium epipsammum PCC 9333]
Length = 875
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/855 (51%), Positives = 626/855 (73%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA ++ A Q HL ALL + G+ + AG + Q
Sbjct: 5 NPNQFTEKAWEAIARTPDVVKQASQQQIEAEHLMKALL-EQEGLASSIFTKAG--VSIQR 61
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
Q +++ P + + + +L ++ RA+A +K +GD ++++ L+L +D
Sbjct: 62 VRDFAEQFIQRNPKVSGSGSSVYLGRSLDALLDRAEAYRKEYGDDFISIEHLMLAYAKDD 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E + A++K+ + ++RG + KV + + +++L+ YGRDL + A GKL
Sbjct: 122 RFGKALFQEFKLDEAKLKNIITQIRGSQ--KVTDQNPEGKYESLEKYGRDLTQYAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIISGDVPQSLRDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKE+ +++GK++LFIDEIH V+GAG T+G+MDA+N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEITDSQGKIVLFIDEIHTVVGAGATQGAMDASN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQV+V +PSV DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVFVDQPSVEDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D +LV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVRISDNSLVAAATLSTRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE + ASK RL + KEL D +++ + L +++ EK+ I++I+ +K+
Sbjct: 420 KILQLEMERLSLQKESNPASKERLERLEKELADFKEEQRTLNGQWQSEKDVINKIQSIKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTETVGP 534
+ +++ +Q+AER YDL +AA+L+YG + E+ + E N Q+ +L E V
Sbjct: 480 EIDKVNIEIQQAERDYDLNKAAELKYGTLTELHRKLEDAERNLAEAQTSGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L +E ER++G EAV AVA+++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVASEIEKLLHLEDELHERVVGQHEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTEL KALA LFD E+ LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELGKALAAYLFDTEDALVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF+NT+
Sbjct: 660 VGYEEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSQGRTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++ +L + + R +V+ +R FRPE LNR+DEI++F LS +LR
Sbjct: 720 IIMTSNIGSQFILDIAGDETRYEEMRSRVMDAMRNSFRPEFLNRIDEIIIFHGLSKAELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ+K + RL +R ++L ++++ALD + YDP+YGARP++R +++++ T++++
Sbjct: 780 YIVQLQIKRLQERLRDRKMSLKLSESALDFLAEVGYDPVYGARPLKRAIQRELETQIAKS 839
Query: 824 LVREEIDENSTVYID 838
++R + ++ T+Y+D
Sbjct: 840 ILRGDFNDGDTIYVD 854
>gi|358061726|ref|ZP_09148380.1| chaperone ClpB [Clostridium hathewayi WAL-18680]
gi|356700485|gb|EHI61991.1| chaperone ClpB [Clostridium hathewayi WAL-18680]
Length = 865
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/871 (52%), Positives = 621/871 (71%), Gaps = 26/871 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
MN +KFT K+ EA+ +LA G+ Q HL +LL+ + + + N GE
Sbjct: 1 MNINKFTQKSIEAVQNCEKLAYEHGNQQMEQEHLLYSLLNLEDSLILKLVTKMNISGEQF 60
Query: 59 AQSAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
AER+ ++KLP ++ S L KV+ A+ KA GD +++V+ L L L
Sbjct: 61 RDEAERL----IEKLPKVGGSGSGQLYVSNDLNKVLISAEDEAKAMGDEYVSVEHLFLSL 116
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L+ D QI +LF+ G+ + +RG + +V S + + T+ L+ YG DLVE+A
Sbjct: 117 LKQPDRQIKELFRTYGINRETFLQALTTVRGNQ--RVVSDNPEATYDTLEKYGYDLVERA 174
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L
Sbjct: 175 RDQKLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGL 234
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D RL ALDMGALVAGAKYRGEFEERLKAVL+EV +++G++ILFIDE+H ++GAG+TEGS
Sbjct: 235 KDKRLFALDMGALVAGAKYRGEFEERLKAVLEEVRKSDGQIILFIDELHTIVGAGKTEGS 294
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA N+ KPMLARG+L CIGATTL+EYRKY+EKDAA ERRFQ V VAEPSV DT+SILRG
Sbjct: 295 MDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDAALERRFQPVTVAEPSVEDTISILRG 354
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+
Sbjct: 355 LKERYEVFHGVKITDSALVSAAVLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPSEL 414
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L RK MQ+EIE AL+KE D+ S+ RL +++KEL +L D+ +++ EK ++ +
Sbjct: 415 DELSRKIMQMEIEEAALKKETDRLSQDRLADLQKELAELHDQFASQKAQWENEKSSVERL 474
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETV 532
L+++ E + + +A++ YDL +AA+L+YG + E++ + E ++L L E+V
Sbjct: 475 SGLREEIENINREIAQAQQNYDLNKAAELQYGKLPELQKQLAAEEEKVKSQDLSLVHESV 534
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
++IA ++SRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+
Sbjct: 535 TDEEIARIISRWTGIPVAKLTESERSKTLHLDDVLHQRVIGQDEGVEKVTEAIIRSKAGI 594
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTELAKALAE LFDDE+ +VRIDMSEYME+HSV+RLIGAPP
Sbjct: 595 KDPTKPIGSFLFLGPTGVGKTELAKALAESLFDDESNMVRIDMSEYMEKHSVARLIGAPP 654
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PY VVLFDEVEKAH VFN LLQVLDDGR+TD G+TVDF+N
Sbjct: 655 GYVGYDEGGQLTEAVRRKPYCVVLFDEVEKAHPDVFNVLLQVLDDGRITDSTGKTVDFKN 714
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
T+IIMTSN+G+++LL G+ +++ A + ++R HFRPE LNRLDEI++F PL+ +
Sbjct: 715 TIIIMTSNIGSQYLLDGIDENGSIRPEAESMAMNDLRAHFRPEFLNRLDEIILFKPLTRD 774
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + L MK++ RLA+R +++ +T+ A V+ YDP+YGARP++R+L+K V T
Sbjct: 775 NIGNIVDLLMKELNKRLADRELSVELTETAKAFVVEHGYDPVYGARPLKRYLQKHVETLA 834
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+++++ +++ +T+ ID S L+ V+
Sbjct: 835 AKIILGDQVRAGNTIVIDVSEDDSRLIAYVE 865
>gi|428301253|ref|YP_007139559.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 6303]
gi|428237797|gb|AFZ03587.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 6303]
Length = 872
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/855 (52%), Positives = 618/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA E A Q HL +LL A AI G N +
Sbjct: 5 NPNQFTEKAWEAIAQTPETAKQHNQQQIESEHLMKSLLEQDG--LAGAIFTKAGVNLQKL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
++ +Q +++ P + + + +L ++ RA A +K GD +++V+ L+L +D
Sbjct: 63 RDKT-DQFIQRQPKVSGSSTSVYLGRSLDTLLDRADAGRKDFGDEYISVEHLLLAYSKDD 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E G+ ++K ++++RG + KV S + + AL+ YGRDL E A GKL
Sbjct: 122 RFGKGLFQEFGLNENKLKDIIKQIRGSQ--KVTDQSPEGKYDALEKYGRDLTEAARKGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR V+ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGDVPQSLKDRQL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAK+RGEFEERLKAVLKEV ++ G ++LFIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDMGALIAGAKFRGEFEERLKAVLKEVTDSNGNIVLFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D +LV AA LS+RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVRIADNSLVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + KEL DL+++ + L +++ EK I +I+ +K+
Sbjct: 420 KILQLEMEKLSLQKESDPASRDRLERLEKELADLKEEQRTLSTQWQSEKGVITKIQSVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG + +++E A G+L Q +L E V
Sbjct: 480 EIDRMNIEIQQAERNYDLNRAAELKYGKLTDLHRKLETAEGELAQAQRSGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
IAEV+S+WTGIP+++L ++EKE R+IG EAV AVA+++ RSRAGL
Sbjct: 540 ADIAEVISKWTGIPISKLVESEKEKLLHLEDELHQRVIGQNEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD + +VRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFIFLGPTGVGKTELAKALAAYLFDTDEAMVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPY+VVLFDE+EKAH VFN LQ+LDDGR+TD QGRT+DF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYTVVLFDEIEKAHPDVFNIFLQILDDGRVTDAQGRTIDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L R +V + +R FRPE LNR+DE ++F L +LR
Sbjct: 720 IIMTSNIGSQYILDVAGDDSNYDDMRFRVTEAMRNAFRPEFLNRVDEQIIFHTLQKSELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ+ + RL++R ++L V+D ALD + YDP+YGARP++R +++++ T++++
Sbjct: 780 NIVQLQINRLRNRLSDRKMSLKVSDTALDFLAEVGYDPVYGARPLKRAIQRELETQIAKR 839
Query: 824 LVREEIDENSTVYID 838
++R E + +T+++D
Sbjct: 840 ILRGEFSDGNTIFVD 854
>gi|218134287|ref|ZP_03463091.1| hypothetical protein BACPEC_02180 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991662|gb|EEC57668.1| ATP-dependent chaperone protein ClpB [[Bacteroides] pectinophilus
ATCC 43243]
Length = 864
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/861 (52%), Positives = 614/861 (71%), Gaps = 32/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ +LA G+ + H +LL+ + A I G + A
Sbjct: 1 MNINKFTQKSMEAVQGCEKLAYEYGNQEIDQEHFLYSLLNIEDSLIAGLIEKMGIDRNA- 59
Query: 61 SAERVFNQAMKKLPSQTP-----APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
F + ++ L + P ++ S L KV+ A+ K GD++++V+ L +
Sbjct: 60 -----FTRDVEALIQKKPKVSGSGAGQVYVSNALNKVLISAEDVAKQMGDSYVSVEHLFI 114
Query: 116 GLLEDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE 173
LL + + +LFK V + +RG + KV + + + T+ LK YG+DLVE
Sbjct: 115 ALLNEPNRDVKELFKRYNVTKDGFLKALSTVRGNQ--KVTTDNPEATYDTLKKYGQDLVE 172
Query: 174 QA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPS 231
+A GK+DPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP
Sbjct: 173 KARDGKMDPVIGRDNEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPE 232
Query: 232 NLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTE 291
L D +L ALDMGALVAGAKYRGEFEERLKAVL EV+++EG++ILFIDEIH ++GAG+TE
Sbjct: 233 GLKDKKLFALDMGALVAGAKYRGEFEERLKAVLDEVKKSEGQIILFIDEIHTIVGAGKTE 292
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
G+MDA N+ KPMLARG+L CIGATTL+E+R+Y+EKD A ERRFQ V V EPSV DT+SIL
Sbjct: 293 GAMDAGNMLKPMLARGELHCIGATTLDEHREYIEKDPALERRFQPVMVDEPSVEDTISIL 352
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RGLK++YE +HGV+I D ALV AA LS RYI+ R+LPDKAIDLVDEACA ++ +LDS P
Sbjct: 353 RGLKDRYEVYHGVKITDGALVSAATLSDRYISDRYLPDKAIDLVDEACAMIKTELDSMPA 412
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
E+D ++RK MQLEIE AL+KE+D S+ RL ++KEL LR++ ++ EK +D
Sbjct: 413 ELDEMQRKIMQLEIEEQALKKEEDNLSRERLDSLQKELAQLREEFSQQKQKWDSEKSSVD 472
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-E 530
+I +LK++ + + +Q A+ Y+L +AA+L+YG + E+ + + E +++ L E
Sbjct: 473 KISKLKEEIDHVNQEIQNAKSDYNLEKAAELQYGRLPELTKQLNEAEEKAHSKDMQLIHE 532
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRA 579
+V D+IA++VSRWTGIPV RL + E++ R++G E V V E+++RS+A
Sbjct: 533 SVTEDEIAKIVSRWTGIPVARLSETERQKTLKLDELLHRRVVGQDEGVTKVTEAIIRSKA 592
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P +P GSFLFLGPTGVGKTELAKALAE LFDDE+ +VR+DMSEYME++SVSRLIGA
Sbjct: 593 GIKDPTKPIGSFLFLGPTGVGKTELAKALAESLFDDESNIVRLDMSEYMEKYSVSRLIGA 652
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF
Sbjct: 653 PPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDF 712
Query: 700 RNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NT+IIMTSN+G+++LL G+ G ++ A + V+ ++R HFRPE LNRLDEI++F PL
Sbjct: 713 KNTIIIMTSNIGSQYLLDGIDADGNISSD-AENAVMGDLRNHFRPEFLNRLDEIIMFKPL 771
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ + + L +KDV RLA++ + + +TDAA D ++ +DP+YGARP++R+++K V
Sbjct: 772 TKSNISSIIDLLIKDVNKRLADKELTVKLTDAARDFIVDNGFDPMYGARPLKRYVQKTVE 831
Query: 818 TELSRMLVREEIDENSTVYID 838
T +++++ ID S + ID
Sbjct: 832 TLAAKLILAGNIDAQSVILID 852
>gi|266619401|ref|ZP_06112336.1| ATP-dependent chaperone protein ClpB [Clostridium hathewayi DSM
13479]
gi|288869078|gb|EFD01377.1| ATP-dependent chaperone protein ClpB [Clostridium hathewayi DSM
13479]
Length = 862
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/868 (52%), Positives = 623/868 (71%), Gaps = 31/868 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ +LA G+ Q HL +LL+ + + I +
Sbjct: 1 MNINKFTQKSLEAVQNCEKLAYEYGNQQIEQEHLLYSLLTVEDSLILKLITKMNVQK--- 57
Query: 61 SAERVFN---QAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
E+ N QA++KLP + ++ S L KV+ A+ KA GD +++V+ L L +
Sbjct: 58 --EQFINETAQAIEKLPKVSGG--QLYISNDLNKVLISAEDEAKAMGDEYVSVEHLFLAM 113
Query: 118 LEDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L+ + +LF+ V + +RG + +V S + + T+ L+ YG D+VE+A
Sbjct: 114 LKQPSRMVKELFRSYAVTRENFLQALSTVRGNQ--RVVSDNPEATYDTLEKYGYDMVERA 171
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L
Sbjct: 172 RDQKLDPVIGRDSEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGL 231
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +L ALDMGAL+AGAKYRGEFEERLKAVL EV++++G++ILFIDE+H ++GAG+TEGS
Sbjct: 232 KDKKLFALDMGALLAGAKYRGEFEERLKAVLDEVKKSDGQIILFIDELHTIVGAGKTEGS 291
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA N+ KPMLARG+L CIGATTL+EYR+Y+E D A ERRFQ V VAEP+V DT+SILRG
Sbjct: 292 MDAGNMLKPMLARGELHCIGATTLDEYRQYIEMDQALERRFQPVMVAEPTVEDTISILRG 351
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+
Sbjct: 352 LKERYEVYHGVKITDSALVSAATLSDRYISDRFLPDKAIDLVDEACAMIKTELDSMPAEL 411
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L RK MQ+EIE AL+KE D SK RL E+++EL +L D+ +++ EK ++ +
Sbjct: 412 DELSRKIMQMEIEEAALKKETDHLSKDRLAELQRELAELHDEFAVSKAQWENEKSSVEHL 471
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETV 532
L+++ E L +Q+A+++YDL RAA+L+YG + +++ + + E ++L L E V
Sbjct: 472 SALREEIENLNREIQDAKQKYDLNRAAELQYGKLPQLQKELEEEEARVMSQDLSLVHENV 531
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
D+IA++VS+WTGIPV +L ++E+ +R+IG EAV V E+++RS+AG+
Sbjct: 532 TEDEIAKIVSKWTGIPVAKLTESERNKTLHLDEELHKRVIGQNEAVEKVTEAIIRSKAGI 591
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTELAKALAE+LFDDEN +VRIDMSEYME+HSVSRLIGAPP
Sbjct: 592 KDPTKPIGSFLFLGPTGVGKTELAKALAERLFDDENNIVRIDMSEYMEKHSVSRLIGAPP 651
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD G+TVDF+N
Sbjct: 652 GYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSTGKTVDFKN 711
Query: 702 TVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
T+IIMTSN+G+++LL G+ G +T + A V+ ++R HFRPE LNRLDEI++F PL+
Sbjct: 712 TIIIMTSNIGSQYLLDGIDETGSITPE-AEAMVMNDLRGHFRPEFLNRLDEIILFKPLTK 770
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E + + L ++D+ R+ ++ + + +TD+A V+ YDP+YGARP++R+L+K V T
Sbjct: 771 ENIAGIIDLMIQDLNKRIGDKELKIELTDSAKQFVVDRGYDPVYGARPLKRYLQKHVETL 830
Query: 820 LSRMLVREEIDENSTVYIDASPKGDNLV 847
+++++ +E+ +T+ ID + G+ L+
Sbjct: 831 AAKIILGDEVRAGNTIVIDVAENGNQLI 858
>gi|186683260|ref|YP_001866456.1| ATPase [Nostoc punctiforme PCC 73102]
gi|186465712|gb|ACC81513.1| ATPase AAA-2 domain protein [Nostoc punctiforme PCC 73102]
Length = 880
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/861 (53%), Positives = 627/861 (72%), Gaps = 29/861 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EA+ E+A H Q HL +ALL A +I N G N +
Sbjct: 5 NPEQFTEKAWEALVRTPEIAKQFQHQQIESEHLMLALLEQEG--LASSIFNKAGVNVQKL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
ER + ++ + + +L +++ RA+ +K GD +++++ LIL +D
Sbjct: 63 HERTIDFINRQPKVSGASSGSVYIGHSLERLLDRAEQYRKEFGDEYISIEHLILAFAKDD 122
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E G+ ++++ ++++RG + KV + + ++AL+ YGRDL + A G L
Sbjct: 123 RFGKGLFQEFGLDEKKLRNIIQQIRGSQ--KVTDQNPEVKYEALEKYGRDLTQLAHEGIL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA---- 234
DPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L
Sbjct: 181 DPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSGDVPESLRVGIA 240
Query: 235 ---DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTE 291
+LIALDMGAL+AGAKYRGEFEERLKAVLKE++EA+G+++LFIDEIH V+GAG T+
Sbjct: 241 GRRHRKLIALDMGALIAGAKYRGEFEERLKAVLKEIQEAQGQIVLFIDEIHTVVGAGATQ 300
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
GSMDA+NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SIL
Sbjct: 301 GSMDASNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISIL 360
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RGLKE+YE HHGV+I D ALV AA LSARYI+ R LPDKAIDLVDEA A +++++ S+PE
Sbjct: 361 RGLKERYELHHGVKISDSALVAAATLSARYISDRFLPDKAIDLVDEAAAKLKMEITSKPE 420
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
E+D ++RK +QLE+E +L+KE D AS+ RL + +EL +L+++ L +++ EK+ ID
Sbjct: 421 ELDEIDRKILQLEMERLSLQKETDSASRERLERLERELAELKERQDALNAQWQAEKQIID 480
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLM 527
IR+++Q+ E + +Q+AER YDL RAA+L+Y + E++ + + E Q+ +
Sbjct: 481 RIRQIRQEIERVNVEIQQAERDYDLNRAAELKYSKLTELQRQLKEAEARLAQIQTSGKSL 540
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLR 576
L E V IAE++S+WTGIPV+RL ++E + R+IG EAV AVA+++ R
Sbjct: 541 LREEVTEADIAEIISKWTGIPVSRLVESEMQKLLHLEEELHKRVIGQDEAVRAVADAIQR 600
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
SRAGL P +P SF+FLGPTGVGKTELAKALAE LFD E+ LVRIDMSEYME+H+V+RL
Sbjct: 601 SRAGLADPNRPIASFIFLGPTGVGKTELAKALAEYLFDTEDALVRIDMSEYMEKHAVARL 660
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
IGAPPGYVG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTD QGRT
Sbjct: 661 IGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRLTDSQGRT 720
Query: 697 VDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
VDF+NT+ IMTSN+G+ ++L + RD+V++ VR+ FRPE LNR+DEI++F
Sbjct: 721 VDFKNTIAIMTSNIGSIYILDVAGDDSKYEQMRDRVMEAVRESFRPEFLNRIDEIIIFHS 780
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L ++LR++ +LQ++ + RL ER ++L ++D ALD ++ YDP+YGARP++R +++++
Sbjct: 781 LRKDELREIVKLQVQRLEERLRERKLSLKISDQALDWIVQVGYDPVYGARPLKRAIQREL 840
Query: 817 VTELSRMLVREEIDENSTVYI 837
T +++ ++R E E T+Y+
Sbjct: 841 ETPIAKAILRGEFHEGDTIYV 861
>gi|120602336|ref|YP_966736.1| ATP-dependent Clp protease ATPase ClpB [Desulfovibrio vulgaris DP4]
gi|120562565|gb|ABM28309.1| ATPase AAA-2 domain protein [Desulfovibrio vulgaris DP4]
Length = 865
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/875 (53%), Positives = 625/875 (71%), Gaps = 34/875 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT K+ +A+A A +A GH + HLA AL+ G+ + ++ G + A
Sbjct: 1 MDIGKFTEKSQQALAEAQNIAVRFGHQEVDAEHLADALVRQEQGLVPRLLDRMGQKPEA- 59
Query: 61 SAERVFNQAMKKLPSQTPA-------PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQL 113
F +A+++ + PA P +I S L V+ +AQ + D +++V+ +
Sbjct: 60 -----FAEALERELGKRPAVSGPGAAPGQIFVSKRLNAVLVKAQDFARQLKDEYVSVEHI 114
Query: 114 ILGLLED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRD 170
LLE+ + +G + +E ++ +V +E +RG + +V SA+ + T++AL+ YGRD
Sbjct: 115 FCVLLEEPASTIMGRIAREFSLSREKVLGVLEDVRGSQ--RVTSANPEDTYEALQKYGRD 172
Query: 171 LVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD 228
LVE+A GKLDPVIGRD EIRRV+RILSRRTKNNPVLIGE GVGKTA+VEGLA RI++GD
Sbjct: 173 LVEEARKGKLDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIVEGLAHRILKGD 232
Query: 229 VPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAG 288
VP L + L ALDMGAL+AGAKYRGEFEERLKAVLKEVE++EG++I+FIDE+H ++GAG
Sbjct: 233 VPEGLKERGLFALDMGALIAGAKYRGEFEERLKAVLKEVEKSEGRIIMFIDELHTIVGAG 292
Query: 289 RTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTV 348
+T+G+MDA+NL KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EP++ D +
Sbjct: 293 KTDGAMDASNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVDEPTIEDAI 352
Query: 349 SILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDS 408
SILRGLKE++E HHGVRI D A+V A LS RYIT R LPDKAIDL+DEA A +R ++DS
Sbjct: 353 SILRGLKERFEVHHGVRISDSAIVEAVTLSHRYITDRQLPDKAIDLIDEAAALIRTEIDS 412
Query: 409 QPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKE 468
P ++D RK MQLEIE AL +E D AS+ RL + EL DLR + L+ ++++EK
Sbjct: 413 LPADLDEANRKIMQLEIEREALRRETDVASRERLERLENELADLRAEQTALLSQWEREKG 472
Query: 469 RIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLML 528
ID +R +K+ E A++EAER YDL RAA+L+Y + E+E + E DE +L
Sbjct: 473 SIDHVRSIKEDIERTRHAIEEAERAYDLNRAAELKYSRLLELERQLESAEKGGHDETRLL 532
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRS 577
E V PD IAE+V+RWTGIPVTRL ++E+E+L+ LA EAV+AV+E+VLR+
Sbjct: 533 KEEVRPDDIAEIVARWTGIPVTRLLESEREKLLRLADVLHERVVGQEEAVDAVSEAVLRA 592
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGL P +P GSF+FLGPTGVGKTEL K LAE LFD E +VR+DMSEYME+H+V+RLI
Sbjct: 593 RAGLSDPSRPIGSFIFLGPTGVGKTELCKTLAEALFDTEENIVRLDMSEYMEKHAVARLI 652
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFNTLLQ+LDDGRLTD GRTV
Sbjct: 653 GAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTDSHGRTV 712
Query: 698 DFRNTVIIMTSNLGAEHLLSGMM-GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
DFRNT+IIMTSN+G+ ++L G+ G + R++V++E+R+HFRPE LNR+DE V+F P
Sbjct: 713 DFRNTIIIMTSNIGSPYMLDGISEGGEFLSGVREKVMEELRRHFRPEFLNRVDETVLFKP 772
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L Q+ ++ L + + RLAER + + + D A D + +YDP+YGARP+RR+L+ +
Sbjct: 773 LLPAQIARIVELLLGRLRGRLAERKIDIRLGDVARDFIAKAAYDPVYGARPLRRYLQHNI 832
Query: 817 VTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T L+R L+ E+ + + V +D D L +R++
Sbjct: 833 ETPLARKLIAGELRDGTAVEVDVV--DDALSFRIE 865
>gi|434398107|ref|YP_007132111.1| ATP-dependent chaperone ClpB [Stanieria cyanosphaera PCC 7437]
gi|428269204|gb|AFZ35145.1| ATP-dependent chaperone ClpB [Stanieria cyanosphaera PCC 7437]
Length = 871
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/858 (52%), Positives = 623/858 (72%), Gaps = 29/858 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP KFT K +AI ++A H Q HL AL+ + + + N+ A S
Sbjct: 5 NPQKFTEKAWQAIVRTPDIAKENKHQQIESEHLLKALIEE------EGLANSIFNKANIS 58
Query: 62 AERVFNQA---MKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+RV ++ + + P + + + +L ++ RA+ +K GD +++++ L+L
Sbjct: 59 VQRVRDKTDEFINRQPKVSNLGESVYLGRSLDTLLDRAENHRKEFGDEYISIEHLLLAYA 118
Query: 119 EDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D ++G LF+E G++ +++ ++ +RG + KV + + +Q+L+ YGR+L + A
Sbjct: 119 KDDRLGRKLFQEFGLSENKLREIIQDVRGSQ--KVTDQNPEGKYQSLEKYGRELTQLARQ 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV DVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNRDVPESLRD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LIALDMGAL+AGAKYRGEFEERLKAVLKEV E+EG +I+FIDEIH V+GAG T+G+MD
Sbjct: 237 RKLIALDMGALIAGAKYRGEFEERLKAVLKEVTESEGNIIMFIDEIHTVVGAGATQGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ V V EP+V DT+SILRGLK
Sbjct: 297 AGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQSVLVDEPNVIDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGV+I D +LV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D
Sbjct: 357 ERYEVHHGVKISDTSLVAAATLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +L+KE D S+ RL ++ KEL +L+++ L +++ EKE ID+IR
Sbjct: 417 IDRKILQLEMERLSLQKEDDILSRERLEKLEKELANLKEEQSELNAQWQSEKEVIDQIRT 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTET 531
LK++ + + +Q+AER YDL RAA+LRYG + +++ I ++E Q+ ML E
Sbjct: 477 LKEEIDRVNLEIQQAERDYDLNRAAELRYGKLTDLQRQIREIESKLAERQTTGRNMLREE 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V IAE++S+WTGIP+++L ++EKE+L IG EAV AVA+++ RSRAG
Sbjct: 537 VTEADIAEIISKWTGIPISKLVESEKEKLLHLEDELHQRVIGQDEAVIAVADAIQRSRAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++PT SF+FLGPTGVGKTELAKALA LFD E LVRIDMSEYME+H+VSRLIGAP
Sbjct: 597 LADPERPTASFIFLGPTGVGKTELAKALAVTLFDSEEALVRIDMSEYMEKHTVSRLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QGRTVDF+
Sbjct: 657 PGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHNDVFNIMLQILDDGRLTDSQGRTVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSN+G++++L + R +V+ +R +FRPE LNR+DEI++F L
Sbjct: 717 NTIIIMTSNIGSQYILDVAGDDNRYEEMRSRVMDAMRNNFRPEFLNRIDEIIIFHGLQKA 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
QLR + ++Q+K + RL E+ ++L +++AALD + YDP+YGARP++R +++ + T +
Sbjct: 777 QLRNIVKIQIKRLEDRLDEQKLSLKMSEAALDFLAELGYDPVYGARPLKRAIQRYLETAI 836
Query: 821 SRMLVREEIDENSTVYID 838
++ ++R E T+++D
Sbjct: 837 AKSILRGEFKGGDTIFVD 854
>gi|427736204|ref|YP_007055748.1| ATP-dependent chaperone ClpB [Rivularia sp. PCC 7116]
gi|427371245|gb|AFY55201.1| ATP-dependent chaperone ClpB [Rivularia sp. PCC 7116]
Length = 872
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/866 (51%), Positives = 623/866 (71%), Gaps = 25/866 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAI E A Q HL ALL + G+ A G N +
Sbjct: 5 NPNQFTEKAWEAITHTPETAKQYQQQQIESEHLMKALL-EQDGLAAPTFTKVGA-NPQKI 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
ER + +K P + + + +L ++ RA +K GD +++++ L+L D
Sbjct: 63 KERT-EEFIKSQPKVSGSSSSVYLGRSLDTLLDRADGYRKEFGDEYISIEHLLLAYARDD 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LFKE G+ ++K ++++RG + KV + + +Q+L+ YGRDL + A GKL
Sbjct: 122 RFGKGLFKEFGIDERKLKDTIKQIRGSQ--KVTDQNPEGKYQSLEKYGRDLTQAASEGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGDVPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKEV E++G ++LFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEVTESQGNIVLFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DTVSILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTVSILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D +LV AA LS RYIT R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADSSLVAAATLSNRYITDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + KEL D +++ + L +++ EK+ I +I+ +K+
Sbjct: 420 KILQLEMEKLSLQKESDAASRERLERLEKELADFKEEQRALSGQWQSEKDVITKIQSVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG + +++E A +L Q +L E V
Sbjct: 480 EIDRVNVEIQQAERDYDLNRAAELKYGKLTDLHRQLETAETELSQAQHSGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAEV+S+WTGIP+++L ++EKE+L +G EAV A+A+++ RSRAGL
Sbjct: 540 ADIAEVISKWTGIPISKLVESEKEKLLQLEDELHNRVVGQDEAVTAIADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTEL KALA +FD E +VRIDMSEYME+H+VSRL+GAPPGY
Sbjct: 600 PNRPIASFIFLGPTGVGKTELGKALASYMFDTEEAMVRIDMSEYMEKHAVSRLVGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF+NT+
Sbjct: 660 VGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGRTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++ +L + R +V++ +R FRPE LNR+DEI+ F L +LR
Sbjct: 720 IIMTSNIGSQFILDVAGDDSGYEEMRTRVMEAMRSSFRPEFLNRIDEIIFFHALQKSELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
K+ +LQ++ + RLA+R ++L + DAALD + YDP++GARP++R +++++ T++++
Sbjct: 780 KIVQLQVERLRHRLADRKMSLKLADAALDFLAEVGYDPVFGARPLKRAIQRELETQIAKS 839
Query: 824 LVREEIDENSTVYIDASPKGDNLVYR 849
++R E ++ T+++D + + LV++
Sbjct: 840 ILRGEFNDGDTIFVDV--ENERLVFK 863
>gi|416401055|ref|ZP_11687155.1| ClpB protein [Crocosphaera watsonii WH 0003]
gi|357262155|gb|EHJ11339.1| ClpB protein [Crocosphaera watsonii WH 0003]
Length = 872
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/856 (52%), Positives = 618/856 (72%), Gaps = 25/856 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAI ++A H Q HL AL S+ G+ N A N +
Sbjct: 5 NPNQFTEKAWEAIVRTPDIAKQNSHQQIESEHLMKAL-SEEEGLATSIFNKA---NLSVP 60
Query: 62 AERVFNQA-MKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
R +A +++ P + + + +L ++ R++ +K D +++V+ L+L L+D
Sbjct: 61 KLREQTEAFIRRQPKVSNPGESVYLGRSLDSLLDRSEGFRKEFEDDYISVEHLLLAYLKD 120
Query: 121 SQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ G +LFKE G+ K ++++RG + KV + + ++AL+ YGRDL + A GK
Sbjct: 121 DRFGKNLFKEFGLTERNFKDIIKQVRGNQ--KVTDQNPENKYEALEKYGRDLTQLAKEGK 178
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D
Sbjct: 179 LDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLRDRT 238
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
LIALDMG+L+AGAKYRGEFEERLKAVLKEV +++G +ILFIDEIH V+GAG T+G+MDA
Sbjct: 239 LIALDMGSLIAGAKYRGEFEERLKAVLKEVTDSQGNIILFIDEIHTVVGAGATQGAMDAG 298
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+
Sbjct: 299 NLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKER 358
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDE+ A +++++ S+PEE+D +
Sbjct: 359 YEVHHGVKIADTALVAAAMLSNRYISDRFLPDKAIDLVDESAAKLKMEITSKPEELDEAD 418
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK +QLE+E +L+KE D AS+ RL + KEL +L+++ L +++ EKE ID+IR+LK
Sbjct: 419 RKILQLEMERLSLQKEVDIASRERLQRLEKELANLKEEQSQLNAQWQAEKEVIDQIRQLK 478
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTETVG 533
+ +++ +Q+AER YDL +AA+LRYG + +++ + +LE Q+ +L E V
Sbjct: 479 ETMDQVNLEIQQAERDYDLNKAAELRYGKLTDLQGQVKELESKIEERQTTGKTLLREEVI 538
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
IAE++S+WTGIP+ +L ++EKE+L IG EAV AV+E++ RSRAGL
Sbjct: 539 ESDIAEIISKWTGIPILKLVESEKEKLLHLEDELHEKVIGQEEAVTAVSEAIQRSRAGLS 598
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +PT SF+FLGPTGVGKTELAKALA+ LFD E +VRIDMSEYME+HSVSRLIGAPPG
Sbjct: 599 DPDRPTASFIFLGPTGVGKTELAKALAKNLFDTEEAIVRIDMSEYMEKHSVSRLIGAPPG 658
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QGR VDF+NT
Sbjct: 659 YVGYDEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNIMLQILDDGRLTDSQGRVVDFKNT 718
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IIMTSN+G++++L R +V++ +R FRPE LNR+DEI++F L EQL
Sbjct: 719 IIIMTSNIGSQYILDVAGDDTRYDEMRSRVMEAMRNSFRPEFLNRIDEIIIFHSLQKEQL 778
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
R++ +LQ++ + RL ++ ++L + D ALD V YDP+YGARP++R +++ + T +++
Sbjct: 779 REIVKLQVQLLRSRLEDQKMSLKLADIALDFVADIGYDPVYGARPLKRAVQRYLETPIAK 838
Query: 823 MLVREEIDENSTVYID 838
++R E T+++D
Sbjct: 839 SILRGEFKAGDTIFVD 854
>gi|223997144|ref|XP_002288245.1| member of the HSP104/clp superfamily [Thalassiosira pseudonana
CCMP1335]
gi|220975353|gb|EED93681.1| member of the HSP104/clp superfamily [Thalassiosira pseudonana
CCMP1335]
Length = 926
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/907 (53%), Positives = 623/907 (68%), Gaps = 58/907 (6%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNA-GGENAA 59
M T T +AI +A GHA P+HLA AL +D I ++ + A G N
Sbjct: 1 MTDRTMTDATTKAIEQCLSIARDNGHALAEPIHLAAALFADDESIGSRVVAKADAGSNNT 60
Query: 60 QS--------------AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGD 105
S + +A+ K P+Q+P P E ST+L KVI+RA ++ KA+GD
Sbjct: 61 TSYQQQQQQDLIDVRQVRQAIQRAILKKPTQSPPPHEASISTSLQKVIQRAISSAKANGD 120
Query: 106 THLAVDQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALK 165
+ +A+D L++ + +D D + AG++ E++RG GRKV SAS + +++AL+
Sbjct: 121 SLVALDHLLVAIYDDKTTKDTLESAGLSKKIATKATEEIRG--GRKVTSASAEESYEALE 178
Query: 166 TYGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQR 223
YG DLV+ A GKLDPVIGRDEEIRR+++IL RRTKNNP L+GEPG GKTA+VEGLA+R
Sbjct: 179 KYGIDLVKAADEGKLDPVIGRDEEIRRIIQILCRRTKNNPCLVGEPGTGKTAIVEGLAKR 238
Query: 224 IVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHL 283
I+ GDVP L DV L LDMGALVAGAKYRGEFEERL+AVL E ++A G++ILF+DE+HL
Sbjct: 239 ILDGDVPLTLKDVALRTLDMGALVAGAKYRGEFEERLRAVLDECKKANGRIILFVDEVHL 298
Query: 284 VLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPS 343
VLGAG+++G+MDAANL KPMLARG+LR IGATTLEEYR+++EKDAAFERRFQ+V V EPS
Sbjct: 299 VLGAGKSDGAMDAANLLKPMLARGELRMIGATTLEEYRQHIEKDAAFERRFQKVQVNEPS 358
Query: 344 VPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVR 403
V T+SILRGL +KYE HHGVRI D AL+ AAQLS RYITGR PDK+IDL+DEA A R
Sbjct: 359 VEATISILRGLSDKYEAHHGVRISDAALITAAQLSDRYITGRFQPDKSIDLLDEAAATRR 418
Query: 404 VQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRY 463
VQLDS+PE+ID LERK MQLEIE AL +EKDKASK R EV+ E+ +LR++L+PL+ ++
Sbjct: 419 VQLDSRPEKIDVLERKIMQLEIEATALGREKDKASKKRRKEVQAEVANLREELEPLLEKW 478
Query: 464 KKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL------ 517
+ ++ R DE++ K+K L AER + +AADL+YGAI ++ + I ++
Sbjct: 479 EADRGRADELKDAKEKLAGLEAKAAAAERVGNYEKAADLKYGAIPDLRSHIAKIVKEEEE 538
Query: 518 ------EGNQSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE------ 565
E N D++L L E V P I E++SRWTGIP +L Q E+ERL+ L +
Sbjct: 539 RKEEQSEKNDDDDSLAL-EVVLPKHITEIISRWTGIPANKLSQTERERLLHLGDRLKERV 597
Query: 566 -----AVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFD-DENLL 619
AV+ V + +LRS+AGL RP QP GSFLFLGPTGVGKTELA+A+ +L+D DE L
Sbjct: 598 VGQDGAVDEVTDCILRSKAGLSRPSQPDGSFLFLGPTGVGKTELARAIFSELYDEDERHL 657
Query: 620 VRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNT 679
VRIDMSEY E HSV+RL+GAPPGY+GH+EGGQLTEAVRR+PY+VVLFDEVEKAH V
Sbjct: 658 VRIDMSEYTEPHSVARLVGAPPGYIGHDEGGQLTEAVRRKPYTVVLFDEVEKAHKQVLTV 717
Query: 680 LLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLS-GMMGKVTMQVARDQVLQEVRK 738
LLQVLD+GRLTD +GRTVDF NTVII+TSNLGA LL + +AR +V+ VR
Sbjct: 718 LLQVLDEGRLTDSKGRTVDFTNTVIILTSNLGASALLDYDESSDESRDLARAKVMSAVRS 777
Query: 739 HFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAES 798
HF PE LNRL +V+F+ L QL K+ + MK V RLA +G+ + + + + +L S
Sbjct: 778 HFSPEFLNRLSGVVMFNSLGASQLEKICQKAMKGVKKRLAGQGIRVVLEKSGTEAILDAS 837
Query: 799 YDPIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYID-------------ASPKGDN 845
YD YGARP+ R+LE+ VVT+LS+ML+ EI TV+I+ A +
Sbjct: 838 YDRSYGARPVERYLEQTVVTKLSKMLIAGEIANGYTVFIEGISDDDSFEIVEPAKKRAKT 897
Query: 846 LVYRVQK 852
L YRV+K
Sbjct: 898 LSYRVEK 904
>gi|282857950|ref|ZP_06267153.1| ATP-dependent chaperone protein ClpB [Pyramidobacter piscolens
W5455]
gi|282584209|gb|EFB89574.1| ATP-dependent chaperone protein ClpB [Pyramidobacter piscolens
W5455]
Length = 869
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/871 (53%), Positives = 621/871 (71%), Gaps = 26/871 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K T K+ EA++ A LA S GH + HL +ALLS G+ + G AA
Sbjct: 1 MNLNKLTQKSQEALSEAQNLAISHGHQEVDVEHLTLALLSQKDGLIPSILEKLGANAAAL 60
Query: 61 SAERVFNQAMKKLPSQTPA--PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A +Q +++ P T D I S L KV+ A+ +A GD +++V+ L +L
Sbjct: 61 GAR--LDQLLERKPRITGGYDKDRIYLSQNLSKVLTDAEKRAQALGDEYVSVEHLFAAIL 118
Query: 119 EDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ Q + L E+GV +E +RG G +V+SA+ + T++ALK YG DLVE A
Sbjct: 119 DLPQHPVAKLLAESGVGADAFLKALESVRG--GARVQSANPEETYEALKKYGVDLVEYAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
KLDPVIGRD+EI RV++ILSR+TKNNPVLIGEPGVGKTA+VEGLAQRI++GDVP +L
Sbjct: 177 SDKLDPVIGRDDEILRVIQILSRKTKNNPVLIGEPGVGKTAIVEGLAQRILKGDVPEDLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMG+L+AGAKYRGEFEERLKAV+ EV+ +EG+VILFIDEIH ++GAGRTEGSM
Sbjct: 237 NRTVFSLDMGSLIAGAKYRGEFEERLKAVINEVKRSEGRVILFIDEIHTIVGAGRTEGSM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT++EYRK +EKDAA ERRFQ V V PS D +SILRGL
Sbjct: 297 DAGNLLKPMLARGELHCIGATTIDEYRKNIEKDAALERRFQPVMVDPPSQEDAISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
K++++ +HGVRI D A+V A LS RYI+ R LPDKAIDL+DEACA VR +++S P E+D
Sbjct: 357 KDRFQVYHGVRITDGAIVAAVTLSDRYISDRFLPDKAIDLIDEACAMVRTEINSMPSELD 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK ++LEIE AL+KEKD AS ARL E++KEL DL+D+ + L RY EKE++ E++
Sbjct: 417 GVSRKVVRLEIEEAALKKEKDDASAARLAELQKELSDLKDRQKELTARYNSEKEKLTEVQ 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG---NQSDENLMLTET 531
+L+QK E ++ AER+YDL +AA+L++G + +++ + + E S + +L E+
Sbjct: 477 QLRQKIEATKHDVETAERQYDLNKAAELQHGVLPQLQKELKEKEAALRGASGDGSLLRES 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++I+ +VS WTGIPVT+L + E+E+L IG EAV+ VA++++R+RAG
Sbjct: 537 VTENEISRIVSDWTGIPVTKLMEGEREKLLHLDDELHKGVIGQDEAVSLVADAIMRARAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P++P GSF+FLGPTGVGKTELAK LA LFD E+ ++RIDMSEYME++SVSRL+GAP
Sbjct: 597 IKDPRRPIGSFIFLGPTGVGKTELAKTLARTLFDSEDNMIRIDMSEYMEKYSVSRLLGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG++EGGQLTEAVR +PYSV+LFDE+EKAH VFN +LQ+LDDGR+TD GRTVDF+
Sbjct: 657 PGYVGYDEGGQLTEAVRSKPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSHGRTVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NTVIIMTSNLG+E LL G+ RD V+ ++ FRPE LNR+D+IV+F PL
Sbjct: 717 NTVIIMTSNLGSELLLEGVRDGTIPPDVRDGVMDLLKSRFRPEFLNRVDDIVLFSPLDKA 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
QL K+ +L + D+A RL ER +AL V+DAALD + YDP++GARP++R++ V T +
Sbjct: 777 QLHKIVKLILNDLAKRLGERRIALNVSDAALDFITEHGYDPVFGARPLKRYISHNVETLV 836
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+R L+ + E +T+ ID +GD L Q
Sbjct: 837 ARYLIANSVVEGATLSIDV--QGDRLALSAQ 865
>gi|428310426|ref|YP_007121403.1| ATP-dependent chaperone ClpB [Microcoleus sp. PCC 7113]
gi|428252038|gb|AFZ17997.1| ATP-dependent chaperone ClpB [Microcoleus sp. PCC 7113]
Length = 875
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/855 (51%), Positives = 623/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA ++A +A Q HL ALL + G+ N E Q
Sbjct: 5 NPNQFTEKAWEAIARTPDIAKAAQQQQLESEHLLKALL-EQDGLANSIFNKL--EVPVQR 61
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
++ P + + + +L ++ RA++ +K + D ++++ LIL L+D
Sbjct: 62 VREATESFSQRQPKVSGSSGSVYLGRSLDALLDRAESYRKDYKDEFISIEHLILAYLKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E + ++K+ ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGKSLFQEFKLDEKKLKNAIDQIRGNQ--KVTDQNPEGKYEALEKYGRDLTQAAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPESLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKEV ++ G++ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEVTDSRGQLILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D +LV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D + R
Sbjct: 360 ELHHGVKISDSSLVAAATLSTRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEINR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D+AS RL + KEL +L+++ + L +++ EK+ ++ I+ +K+
Sbjct: 420 KILQLEMERLSLQKESDRASVERLERLEKELANLKEEQRTLNAQWQSEKDVLNHIQSIKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAI----GQLEGNQSDENLMLTETVGP 534
+ + + + +AER YDL +AA+L+YG + +++ ++ QL Q+ +L E V
Sbjct: 480 EIDRVNVEISQAERDYDLNKAAELKYGKLSQLQKSLQEAETQLAATQTSGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L +G EAV AVA+++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEKEKLLHLEDELHQRVVGQDEAVTAVADAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E+ LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALASYLFDTEDALVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTE++RRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QG TVDF+NTV
Sbjct: 660 VGYEEGGQLTESIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDAQGHTVDFKNTV 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L R +V++ +R FRPE LNR+DEI++F L QLR
Sbjct: 720 IIMTSNVGSQYILDLATEDSQYDEMRSRVMEAMRSSFRPEFLNRIDEIIIFHSLQKHQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ+K + RLA+R ++L ++++ALD + YDP++GARP++R +++++ T++++
Sbjct: 780 HIVQLQVKRLEQRLADRKMSLKLSESALDFLAEVGYDPVFGARPLKRAIQRELETQIAKA 839
Query: 824 LVREEIDENSTVYID 838
++R E ++ T+++D
Sbjct: 840 ILRGEFNDGDTIFVD 854
>gi|443317310|ref|ZP_21046724.1| ATP-dependent chaperone ClpB [Leptolyngbya sp. PCC 6406]
gi|442783071|gb|ELR92997.1| ATP-dependent chaperone ClpB [Leptolyngbya sp. PCC 6406]
Length = 872
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/855 (52%), Positives = 617/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K +AI E+A A H Q HL ALL + G+ N A E Q+
Sbjct: 5 NPNQFTEKAWQAIVRTPEIAKEAKHQQIESEHLMKALL-EQEGLATSVFNKA--EANVQN 61
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ K P + A + +L +++ RA +K GD +++++ L+L +D
Sbjct: 62 LRDRTTDFIGKQPQISNAGGSVYLGRSLDQLLDRADGHRKDFGDEYISIEHLLLAYAKDE 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LFKE G+ ++++ ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGRALFKEFGLDGNKLRAIIKEVRGNQ--KVTDQNPEGKYEALEKYGRDLTDLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR V+ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D R+
Sbjct: 180 DPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPESLRDRRI 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFEERLKAVLKEV+E+ G+++LFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKYRGEFEERLKAVLKEVQESAGQMVLFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQV++ +P++ DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVFIDQPTIEDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDE+ A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADNALVAAAVLSTRYISDRFLPDKAIDLVDESAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS RL + KEL DL++ L +++ EK+ ID I++LK+
Sbjct: 420 KVIQLEMEKLSLQKETDPASVDRLERIEKELADLKETQSSLNAQWQAEKDLIDNIQKLKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG + + +E A L Q+ + +L E V
Sbjct: 480 ELDHVNIEIQQAERNYDLNRAAELKYGKLTDLQRRLEGAEANLSNAQTSGHSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIPV++L +E E+L IG EAV AVA+++ RSRAGL
Sbjct: 540 TDIAEIISKWTGIPVSKLVASEMEKLLHLEDELHQRVIGQDEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA +FD E +VRIDMSEYME+H+V+RLIGAPPGY
Sbjct: 600 PNRPIASFIFLGPTGVGKTELAKALAAYMFDTEEAMVRIDMSEYMEKHAVARLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG EEGGQLTEA+RRRPY+V+LFDE+EKAH VFN +LQVLDDGRLTD QGRTVDFRN+V
Sbjct: 660 VGFEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIMLQVLDDGRLTDSQGRTVDFRNSV 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSN+G++++L + RD+V++ +R FRPE LNR+DE+++F L EQLR
Sbjct: 720 VIMTSNVGSQYILDLAGDDEKYDLMRDRVMEAMRSQFRPEFLNRVDEMIIFHSLRLEQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ++ + RL++R + L +++ ALD V +DP+YGARP++R ++K++ T L++
Sbjct: 780 QIVKLQIRRLEQRLSDRKMTLTLSEEALDWVAHVGFDPVYGARPLKRAVQKELETPLAKG 839
Query: 824 LVREEIDENSTVYID 838
++R E +Y D
Sbjct: 840 ILRGEFQNGDRIYAD 854
>gi|67923982|ref|ZP_00517435.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
gi|67854157|gb|EAM49463.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
Length = 872
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/856 (52%), Positives = 618/856 (72%), Gaps = 25/856 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAI ++A H Q HL AL S+ G+ N A N +
Sbjct: 5 NPNQFTEKAWEAIVRTPDIAKQNSHQQIESEHLMKAL-SEEEGLATSIFNKA---NLSVP 60
Query: 62 AERVFNQA-MKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
R +A +++ P + + + +L ++ R++ +K D +++V+ L+L L+D
Sbjct: 61 KLREQTEAFIRRQPKVSNPGESVYLGRSLDSLLDRSEGFRKEFEDDYISVEHLLLAYLKD 120
Query: 121 SQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ G +LFKE G+ K ++++RG + KV + + ++AL+ YGRDL + A GK
Sbjct: 121 DRFGKNLFKEFGLTERNFKDIIKQVRGNQ--KVTDQNPENKYEALEKYGRDLTQLAKEGK 178
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D
Sbjct: 179 LDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLRDRT 238
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
LIALDMG+L+AGAKYRGEFEERLKAVLKEV +++G +ILFIDEIH V+GAG T+G+MDA
Sbjct: 239 LIALDMGSLIAGAKYRGEFEERLKAVLKEVTDSQGNIILFIDEIHTVVGAGATQGAMDAG 298
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+
Sbjct: 299 NLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKER 358
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDE+ A +++++ S+PEE+D +
Sbjct: 359 YEVHHGVKIADTALVAAAMLSNRYISDRFLPDKAIDLVDESAAKLKMEITSKPEELDEAD 418
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK +QLE+E +L+KE D AS+ RL + KEL +L+++ L +++ EKE ID+IR+LK
Sbjct: 419 RKILQLEMERLSLQKEVDIASRERLQRLEKELANLKEEQSQLNAQWQAEKEVIDQIRQLK 478
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTETVG 533
+ +++ +Q+AER YDL +AA+LRYG + +++ + +LE Q+ +L E V
Sbjct: 479 ETMDQVNLEIQQAERDYDLNKAAELRYGKLTDLQGQVKELESKIEERQTTGKTLLREEVI 538
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
IAE++S+WTGIP+ +L ++EKE+L IG EAV AV+E++ RSRAGL
Sbjct: 539 ESDIAEIISKWTGIPILKLVESEKEKLLHLEDELHEKVIGQEEAVTAVSEAIQRSRAGLS 598
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +PT SF+FLGPTGVGKTELAKALA+ LFD E +VRIDMSEYME+HSVSRLIGAPPG
Sbjct: 599 DPDRPTASFIFLGPTGVGKTELAKALAKNLFDTEEAIVRIDMSEYMEKHSVSRLIGAPPG 658
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QGR VDF+NT
Sbjct: 659 YVGYDEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNIMLQILDDGRLTDSQGRVVDFKNT 718
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IIMTSN+G++++L R +V++ +R FRPE LNR+DEI++F L EQL
Sbjct: 719 IIIMTSNIGSQYILDVAGDDTRYDEMRSRVMEAMRNSFRPEFLNRIDEIIIFHSLQKEQL 778
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
R++ +LQ++ + RL ++ ++L + D +LD V YDP+YGARP++R +++ + T +++
Sbjct: 779 REIVKLQVQLLRSRLEDQKMSLKLADISLDFVADIGYDPVYGARPLKRAVQRYLETPIAK 838
Query: 823 MLVREEIDENSTVYID 838
++R E T+++D
Sbjct: 839 SILRGEFKAGDTIFVD 854
>gi|355673711|ref|ZP_09059186.1| ATP-dependent chaperone ClpB [Clostridium citroniae WAL-17108]
gi|354814424|gb|EHE99024.1| ATP-dependent chaperone ClpB [Clostridium citroniae WAL-17108]
Length = 874
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/869 (52%), Positives = 624/869 (71%), Gaps = 24/869 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ +LA G+ Q HL +LL+ + + I G +
Sbjct: 12 MNINKFTQKSMEAVQNCEKLAYEYGNQQIDQQHLLYSLLTLDDSLILKLITKMGIQGDMF 71
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ E QA+++L ++ ++ S L KV+ + KA GD +++V+ L L LL+
Sbjct: 72 TNEA--KQAVERL-TKVSGGGQLYISNDLNKVLINGEDEAKAMGDEYVSVEHLFLSLLKH 128
Query: 121 SQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
S I LFK + + +RG + +V + + + T+ L+ YG DLVE+A
Sbjct: 129 SNKDIKALFKLYNITRETFLQALSTVRGNQ--RVVTDNPEATYDTLQKYGYDLVERARDQ 186
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 187 KLDPVIGRDGEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPDGLKDK 246
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L ALDMGALVAGAKYRGEFEERLKAVL+EV++++G++ILFIDE+H ++GAG+TEGSMDA
Sbjct: 247 KLFALDMGALVAGAKYRGEFEERLKAVLEEVKKSDGQIILFIDELHTIVGAGKTEGSMDA 306
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V EPSV DT+SILRGLKE
Sbjct: 307 GNMLKPMLARGELHCIGATTLNEYRQYIEKDAALERRFQPVLVDEPSVEDTISILRGLKE 366
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LD+ P E+D +
Sbjct: 367 RYEVFHGVKITDSALVSAATLSDRYISDRFLPDKAIDLVDEACAMIKTELDTMPAELDEM 426
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK MQ+EIE AL+KE D+ S+ RL +++KEL +L D+ +++ EK +D + L
Sbjct: 427 SRKIMQMEIEEAALKKETDRLSRDRLADLQKELAELHDEFAAKKAQWENEKASVDRLSSL 486
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+++ E + +Q+A++RYDL +AA+L+YG + +++ + E E+L L E+V D
Sbjct: 487 REEIEAVNRDIQDAKQRYDLNKAAELQYGRLPQLQKELEAEEERVKKEDLSLVHESVTED 546
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA +VSRWTG+PV++L ++E+ +R++G E V V ES++RS+AG+ P
Sbjct: 547 EIARIVSRWTGVPVSKLTESERSKTLHLDEVLHKRVVGQDEGVQKVTESIIRSKAGIKDP 606
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALAE LFDDE+ +VRIDMSEYME+HSV+RLIGAPPGYV
Sbjct: 607 TKPIGSFLFLGPTGVGKTELAKALAEALFDDESNMVRIDMSEYMEKHSVARLIGAPPGYV 666
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT+I
Sbjct: 667 GYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTII 726
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
I+TSN+G+++LL G+ G++ + A V+ ++R HFRPE LNRLDE+++F PL+ E +
Sbjct: 727 ILTSNIGSQYLLEGIDSQGRIRPE-AEAAVMNDLRAHFRPEFLNRLDEMILFKPLTRENI 785
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++ L + D+ RL++R + + +TD+A + + YDP+YGARP++R+L+K V T ++
Sbjct: 786 SRIVDLCVADLNKRLSDRNLTIELTDSAKEFITERGYDPVYGARPLKRYLQKHVETLAAK 845
Query: 823 MLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+++ + + E +T+ +D + G L+ V+
Sbjct: 846 IILGDGVREGNTIVVDVAEDGSRLIAYVE 874
>gi|113474405|ref|YP_720466.1| ATPase [Trichodesmium erythraeum IMS101]
gi|110165453|gb|ABG49993.1| ATPase AAA-2 [Trichodesmium erythraeum IMS101]
Length = 870
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/855 (52%), Positives = 625/855 (73%), Gaps = 26/855 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAI+ ++A ++ + Q HL ALL + +G+ A + G +
Sbjct: 5 NPNQFTEKAWEAISRTPDIAKTSQNQQIEAEHLMKALL-EQNGLVASLFSKVGV--STTK 61
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ + +K+ P P+ I +L ++ A+ ++ + D +++++ LIL L+D
Sbjct: 62 IQEYTDSFIKRQPKVKNIPNNIYLGRSLDALLDNAEKYRQEYKDEYISIEHLILAYLKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
G +L+KE + ++K + ++RGK+ KV + + ++AL+ YGRDL E A GKL
Sbjct: 122 HFGKNLYKEFKLDEVKLKKTISQVRGKQ--KVTDKNPEGKYEALEKYGRDLTEFAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ DVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIITLDVPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKEV ++EGK+ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEVTDSEGKIILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV D +SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDAISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D +LV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKISDSSLVAAATLSTRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D ASK RL + K+L +L++ + L +++ EK I I+ +K+
Sbjct: 420 KILQLEMEKLSLQKESDTASKERLGRLEKDLANLKEGQRALNAQWESEKGIISTIQTVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ +++ +Q+AER YDL RAA+L+YG + ++VE A +L Q+ +L E V
Sbjct: 480 EIDKVNIEIQQAERNYDLNRAAELKYGRLINLQKQVEEAEAKLATTQTSGQTLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L IG EAV+AV++++ RSRAGL
Sbjct: 540 ADIAEIISKWTGIPISKLVESEKEKLLHLEGELHKRVIGQNEAVSAVSDAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTEL KALA LFD E+ +VRIDMSEYME+HSVSRLIGAPPGY
Sbjct: 600 PNRPVASFIFLGPTGVGKTELGKALAAYLFDTEDAMVRIDMSEYMEKHSVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QG VDF+N+V
Sbjct: 660 VGYDEGGQLTEAIRRRPYTVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGHKVDFKNSV 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L MQ +V++ +R FRPE LNR+DE ++F L EQLR
Sbjct: 720 IIMTSNIGSQYILDVTDDYEQMQ---GRVMEALRAAFRPEFLNRIDETIIFHGLQKEQLR 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ+ + RLAER ++L +TDAA++ + YDP+YGARP++R +++++ T++++
Sbjct: 777 EIVQLQVVRLEKRLAERKMSLKLTDAAINFLADVGYDPVYGARPLKRAIQRELETQIAKS 836
Query: 824 LVREEIDENSTVYID 838
++R E ++ T+++D
Sbjct: 837 ILRSEFNDGDTIFVD 851
>gi|428777318|ref|YP_007169105.1| ATP-dependent chaperone ClpB [Halothece sp. PCC 7418]
gi|428691597|gb|AFZ44891.1| ATP-dependent chaperone ClpB [Halothece sp. PCC 7418]
Length = 873
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/860 (52%), Positives = 617/860 (71%), Gaps = 29/860 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSD---PSGIFAQAINNAGGENA 58
NP++FT KT EAI +LA Q HL +LL S +F++A + +
Sbjct: 5 NPNQFTEKTWEAIVRLPDLAKQNQQQQIESEHLMKSLLEQDGLASSVFSKA------DVS 58
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q ++ + K P + I +L + RA+ +K D +++++ L+L
Sbjct: 59 VQRLRDRADEFINKQPKISNTGGSIYLGRSLDSLFDRAENYRKKFEDEYISIEHLLLAFA 118
Query: 119 EDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D + G L+KE G+ ++K+ ++ +RG + KV + + ++AL+ YGRDL + A
Sbjct: 119 QDDRFGKALYKEFGLTEEKLKAVIQDIRGSQ--KVTDQNPEGKYEALEKYGRDLTQWARE 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRR V+ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV DVP +L D
Sbjct: 177 GKLDPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSRDVPESLRD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LIALDMGALVAGAKYRGEFEERLKAVLKEV +AEG++I+FIDEIH V+GAG T+G+MD
Sbjct: 237 RKLIALDMGALVAGAKYRGEFEERLKAVLKEVTDAEGQIIMFIDEIHTVVGAGATQGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+LRCIGATTL+EYR+++EKDAA ERRFQ VYV EP+V DT+SILRGLK
Sbjct: 297 AGNLLKPMLARGELRCIGATTLDEYRQHIEKDAALERRFQAVYVDEPNVTDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGV+I DR LV AA LS RYI+ R LPDKAIDLVDE+ A +++++ S+PEE+D
Sbjct: 357 ERYEVHHGVKISDRCLVAAAMLSDRYISDRFLPDKAIDLVDESAAKLKMEITSKPEELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +L+KE D AS+ RL + KEL DL+++ L +++ EKE ID+IR
Sbjct: 417 IDRKILQLEMERLSLQKEDDTASQERLETLEKELADLKEEQDELNAQWQAEKEVIDQIRS 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLTET 531
+K+ +++ +Q+AER YDL RAA+LRYG + E+ + A +LE QS + +L E
Sbjct: 477 IKETIDQVNLEIQQAERDYDLNRAAELRYGRLTELQRQRQEAESKLEEMQSSGHTLLREE 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V +AE++S+WTGIP+++L +EKE+L +G EAV AV+E++ RSRAG
Sbjct: 537 VAEADVAEIISKWTGIPISKLMSSEKEKLLHLEDELHDRVVGQEEAVRAVSEAIQRSRAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +PT SF+FLGPTGVGKTELAKALA LFD E LVR+DMSEYME+H+VSRLIGAP
Sbjct: 597 LSDPNRPTASFIFLGPTGVGKTELAKALASNLFDTETALVRVDMSEYMEKHAVSRLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTE +RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QGR VDF+
Sbjct: 657 PGYVGYEEGGQLTEPIRRRPYSVILFDEIEKAHPDVFNIMLQILDDGRLTDSQGRVVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSN+G++ +L ++V+ +R++FRPE LNR+DEI++F L +
Sbjct: 717 NTIIIMTSNIGSDLILDVAGDDSRYDEMYNRVMGAMRENFRPEFLNRIDEIIIFHALQRD 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
QLR + +LQ + + RL+E+ ++L ++ ALD + YDP+YGARP++R +++ V T +
Sbjct: 777 QLRNIVKLQTQYLEDRLSEQKLSLKLSQEALDFLADIGYDPVYGARPLKRAVQRYVETPI 836
Query: 821 SRMLVREEIDENSTVYIDAS 840
++ L++ E E T++ D +
Sbjct: 837 AKSLLKGEFSEGDTLFADVA 856
>gi|436669980|ref|YP_007317719.1| ATP-dependent chaperone ClpB [Cylindrospermum stagnale PCC 7417]
gi|428262252|gb|AFZ28201.1| ATP-dependent chaperone ClpB [Cylindrospermum stagnale PCC 7417]
Length = 880
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/861 (53%), Positives = 625/861 (72%), Gaps = 29/861 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EA+ E+A H Q HL +ALL A +I N G N +
Sbjct: 5 NPEQFTEKAWEALVRTPEIAKQFQHQQIESEHLMLALLEQEG--LASSIFNKAGVNVQKL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
ER + ++ + + +L +++ RA+ +K GD +++++ LIL +D
Sbjct: 63 HERTIDFINRQPKVSGASSGSVYIGHSLERLLDRAEQYRKEFGDEYISIEHLILAFAKDD 122
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E G+ ++++ ++++RG + KV + + ++AL+ YGRDL + A G L
Sbjct: 123 RFGKGLFQEFGLDEKKLRNIIQQIRGSQ--KVTDQNPEVKYEALEKYGRDLTQLAHEGIL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA---- 234
DPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L
Sbjct: 181 DPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSGDVPESLRVGVA 240
Query: 235 ---DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTE 291
+LIALDMGAL+AGAKYRGEFEERLKAVLKE++EA+G+++LFIDEIH V+GAG T+
Sbjct: 241 GRRHRKLIALDMGALIAGAKYRGEFEERLKAVLKEIQEAQGQIVLFIDEIHTVVGAGATQ 300
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
GSMDA+NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SIL
Sbjct: 301 GSMDASNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVGDTISIL 360
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RGLKE+YE HHGV+I D ALV AA LSARYI+ R LPDKAIDLVDEA A +++++ S+PE
Sbjct: 361 RGLKERYELHHGVKISDSALVAAATLSARYISDRFLPDKAIDLVDEAAAKLKMEITSKPE 420
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
E+D ++RK +QLE+E +L+KE D AS+ RL + +EL +L+++ L +++ EK+ ID
Sbjct: 421 ELDEIDRKILQLEMERLSLQKETDSASRERLERLERELAELKERQVALNAQWQAEKQIID 480
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLM 527
IR+++Q+ E + +Q+AER YDL RAA+L+Y + E +E A +L Q+ +
Sbjct: 481 RIRQIRQEIERVNVEIQQAERDYDLNRAAELKYSKLTELQRQLEEAEARLTQIQTSGKFL 540
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLR 576
L E V IAE++S+WTGIPV+RL ++E + R+IG EAV AVA+++ R
Sbjct: 541 LREEVTEADIAEIISKWTGIPVSRLVESEMQKLLHLEEELHERVIGQEEAVRAVADAIQR 600
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
SRAGL P +P SF+FLGPTGVGKTELAKALAE LFD E+ LVRIDMSEYME+H+V+RL
Sbjct: 601 SRAGLADPNRPIASFIFLGPTGVGKTELAKALAEYLFDTEDALVRIDMSEYMEKHAVARL 660
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
IGAPPGYVG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTD QGRT
Sbjct: 661 IGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRLTDSQGRT 720
Query: 697 VDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
VDF+NT+ IMTSN+G+ ++L + RD+V++ VR+ FRPE LNR+DEI+ F
Sbjct: 721 VDFKNTIAIMTSNIGSIYILDVAGDDSKYEQMRDRVMEAVRESFRPEFLNRIDEIIFFHS 780
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L ++LR++ +LQ++ + RL ER + L ++D AL+ ++ YDP+YGARP++R +++++
Sbjct: 781 LRKDELREIVKLQVQRLEERLRERKLLLKISDEALNWIVQVGYDPVYGARPLKRAIQREL 840
Query: 817 VTELSRMLVREEIDENSTVYI 837
T +++ ++R E E T+Y+
Sbjct: 841 ETPIAKAILRGEFHEGDTIYV 861
>gi|294055770|ref|YP_003549428.1| ATP-dependent chaperone ClpB [Coraliomargarita akajimensis DSM
45221]
gi|293615103|gb|ADE55258.1| ATP-dependent chaperone ClpB [Coraliomargarita akajimensis DSM
45221]
Length = 870
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/854 (53%), Positives = 614/854 (71%), Gaps = 23/854 (2%)
Query: 1 MNPD--KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENA 58
MN D FT K+ AI A LA G + HL +AL+ GI ++ +
Sbjct: 1 MNIDLNSFTEKSAFAIQEAQTLARQHGQQEIDVWHLLLALVQQEGGIVPGLLSRM--QVT 58
Query: 59 AQSAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILG 116
+ E + ++ LP S T ++ S++L + + A+ A+ + D ++ + L LG
Sbjct: 59 PSAVELAGQRELRALPKVSGTVNASQVYISSSLQQALAAAEKARVSMQDEFVSTEHLFLG 118
Query: 117 LLE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
LLE S++ F++ G+ V + +E R G+KV S + +T F+AL+ YG DLVEQ
Sbjct: 119 LLEVKHSKLIAFFQQFGLERDAVLAALESARA--GQKVTSRTPETGFEALEKYGIDLVEQ 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GK+DPVIGRD+EIRRVVRILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP
Sbjct: 177 ARLGKMDPVIGRDDEIRRVVRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMG+LVAGAKYRGEFEERLKAVL EV+ ++G+++LFIDE+H ++GAG+TEG
Sbjct: 237 LKDKTIFALDMGSLVAGAKYRGEFEERLKAVLAEVKNSDGRILLFIDELHTIVGAGKTEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L C+GATTL+EYR+++EKDAA ERRFQ V V +P+V DT+SILR
Sbjct: 297 AMDAGNMLKPMLARGELHCVGATTLDEYRQHIEKDAALERRFQTVMVDQPTVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGVRIQD ALV AA LS RYI+ R LPDKAIDLVDEACA +R ++DS P+E
Sbjct: 357 GLRERFELHHGVRIQDNALVQAAVLSHRYISERFLPDKAIDLVDEACAMIRTEMDSMPQE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D L R+ +QLEIE AL+ EKD SK RL + +EL D+R+K L ++ EK IDE
Sbjct: 417 LDALTRRMLQLEIEEAALKNEKDAGSKERLNSLSRELADIREKASALRGQWDAEKAAIDE 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETV 532
IR +++ + +++AER YDL A LR+G + E+EA + LE +++E +L E V
Sbjct: 477 IRAIREALDATRIEMEQAERNYDLNAVAQLRHGKVPELEAKLQSLEAAEANEGALLKEEV 536
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
++IA +V++WTG+PVTRL + E+ ER+IG EAV V+E++LR+RAG+
Sbjct: 537 SQEEIASIVAKWTGVPVTRLVEGERDKLLRLEEVLHERVIGQDEAVTLVSEAILRARAGI 596
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P++P GSFLFLGPTGVGKTELA+ LAE LFD E+ +VRIDMSEYME+H+V+RLIGAPP
Sbjct: 597 KDPRRPIGSFLFLGPTGVGKTELARTLAESLFDTEDNIVRIDMSEYMEKHAVARLIGAPP 656
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QG TVDF+N
Sbjct: 657 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRVTDAQGHTVDFKN 716
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
TVIIMTSN+G+ L G+ G + R+ V+ E+R FRPE LNR+D++++F PLS E+
Sbjct: 717 TVIIMTSNVGSRFLTEGVAGAEIPESVRESVMAELRHGFRPEFLNRIDDVILFKPLSLEE 776
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L + D+ RL +R + + +A + + +YDP+YGARP++R+L+K++ T L+
Sbjct: 777 ISAIVDLLVADLNARLEDRRIRIEFDLSAREWIAERAYDPVYGARPLKRFLQKEIETRLA 836
Query: 822 RMLVREEIDENSTV 835
R+L+ E+ EN+TV
Sbjct: 837 RILISGELSENTTV 850
>gi|225376833|ref|ZP_03754054.1| hypothetical protein ROSEINA2194_02475 [Roseburia inulinivorans DSM
16841]
gi|225211329|gb|EEG93683.1| hypothetical protein ROSEINA2194_02475 [Roseburia inulinivorans DSM
16841]
Length = 860
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/869 (52%), Positives = 623/869 (71%), Gaps = 27/869 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EAI +LA G+ + HL VALL G+ + I E
Sbjct: 1 MNIQKFTQKSVEAINDCEKLAYEYGNQEIEQEHLLVALLRQEDGLIPKLI-----EKMEI 55
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
E + A + L ++ ++ L KV+ A+ KA GD +++V+ L L L++
Sbjct: 56 QKEHFVDNAERHLAARVKVSGGQVYVGQDLNKVLVHAEDEAKAMGDEYVSVEHLFLCLIK 115
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ + ++FKE G+ R + +RG + +V S + + T+ L+ YG D+VE+A
Sbjct: 116 YPNKAMKEIFKEYGITRERFLQALSTVRGNQ--RVVSDNPEATYDTLEKYGYDMVERARN 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 174 QKLDPVIGRDAEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLKD 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L ALDMGALVAGAKYRGEFEERLKAVL +++ ++G++ILFIDE+H ++GAG+T+G+MD
Sbjct: 234 KKLFALDMGALVAGAKYRGEFEERLKAVLDDIKNSDGQIILFIDELHTIVGAGKTDGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A L KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRGLK
Sbjct: 294 AGQLLKPMLARGELHCIGATTLDEYREYIEKDAALERRFQPVQVDEPTVEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 ERYEVFHGVKITDSALVSAAVLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L R+ MQ+EIE AL+KE D+ S+ RL +++KEL +LRD+ ++++ EK+ ++++++
Sbjct: 414 LNRRVMQMEIEETALKKETDRLSQERLADLQKELAELRDEFNTKKVQWENEKKSVEKVQK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
L+++ E++ ++ A++ YDL +AA+L+YG + +++ + E +++L L E V
Sbjct: 474 LREEIEQVKNEIKTAQQNYDLEKAAELQYGKLPQLQKQLEVEEEEVKNKDLSLVHENVSE 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA ++SRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+
Sbjct: 534 EEIARIISRWTGIPVAKLTESERNKTLHLDEELHKRVIGQDEGVTKVTEAIIRSKAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAKALA LFDDE+ +VR+DMSEYME++SVSRLIGAPPGY
Sbjct: 594 PSKPIGSFLFLGPTGVGKTELAKALAASLFDDESNMVRLDMSEYMEKYSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 654 VGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQ-VLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IIMTSNLG+ HLL G+ + A ++ V+ E+R HFRPE LNRLDEI++F PL+ + +
Sbjct: 714 IIMTSNLGSAHLLEGIDENGDINPACEEAVMNELRGHFRPEFLNRLDEIIMFKPLTKDNI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L M D+ RLA+R + + ++D+A ++ YDPIYGARP++R+L+K V T ++
Sbjct: 774 GNIINLLMNDLNKRLADREITVELSDSARQFIVDHGYDPIYGARPLKRFLQKHVETLSAK 833
Query: 823 MLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+++ +E+ E T+ ID +GD L RV+
Sbjct: 834 LILADEVREGDTILIDT--EGDKLTARVK 860
>gi|172036856|ref|YP_001803357.1| ATP-dependent Clp protease ATP-binding subunit [Cyanothece sp. ATCC
51142]
gi|354554660|ref|ZP_08973964.1| ATP-dependent chaperone ClpB [Cyanothece sp. ATCC 51472]
gi|171698310|gb|ACB51291.1| ATP-dependent Clp protease, ATP-binding subunit [Cyanothece sp.
ATCC 51142]
gi|353553469|gb|EHC22861.1| ATP-dependent chaperone ClpB [Cyanothece sp. ATCC 51472]
Length = 872
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/855 (52%), Positives = 623/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAI ++A Q HL +L ++ G+ A +I N + +
Sbjct: 5 NPNQFTEKAWEAIVRTPDIAKQNSQQQIESEHLMKSL-TEQEGL-ATSIFNKANISVPKL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + +++ P + + + +L ++ R++ +K D +++++ L+L +D
Sbjct: 63 RDRT-EEFIRRQPKVSNPGESVYLGRSLDSLLDRSETFRKEFEDDYISIEHLLLAYSKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G +LFKE G++ +K ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGKNLFKEFGLSENNLKEIIKQVRGNQ--KVTDQNPENKYEALEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLRDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMG+L+AGAKYRGEFEERLKAVLKEV +++G +ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGSLIAGAKYRGEFEERLKAVLKEVTDSQGNIILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVNEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDE+ A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADTALVAAAMLSNRYISDRFLPDKAIDLVDESAAKLKMEITSKPEELDEVDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE+D+ S+ RL ++ KEL DL+++ L +++ EKE ID+IR LK+
Sbjct: 420 KILQLEMERLSLQKEEDQVSRERLEKLEKELADLKEEQSQLNAQWQAEKEVIDQIRELKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTETVGP 534
+++ +Q+AER YDL +AA+LRYG + +++ + +LE Q+ +L E V
Sbjct: 480 TIDQVNLEIQQAERDYDLNKAAELRYGKLTDLQRQVKELESKIEERQTTGKTLLREEVIE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L IG EAV AV+E++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEKEKLLHLEDELHERVIGQEEAVTAVSEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA+ LFD E +VRIDMSEYME+HSVSRLIGAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEAIVRIDMSEYMEKHSVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QGR VDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNIMLQILDDGRLTDSQGRVVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L R +V+ +R +FRPE LNR+DEI++F L EQLR
Sbjct: 720 IIMTSNIGSQYILDVAGDDSHYDEMRSRVMDAMRNNFRPEFLNRIDEIIIFHSLEKEQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ++ + RL ++ ++L + D ALD V YDP+YGARP++R +++ + T +++
Sbjct: 780 EIVKLQIQLLRSRLEDQKMSLKLADVALDFVADIGYDPVYGARPLKRAVQRYLETPIAKS 839
Query: 824 LVREEIDENSTVYID 838
++R E T++ D
Sbjct: 840 ILRGEFKPGDTIFAD 854
>gi|449551144|gb|EMD42108.1| hypothetical protein CERSUDRAFT_110651 [Ceriporiopsis subvermispora
B]
Length = 905
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/868 (53%), Positives = 613/868 (70%), Gaps = 41/868 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSD---------------PSGIFAQA 49
FT + E++A A +LA HAQ P H+A ALL++ P+ +F+
Sbjct: 6 NFTDRAQESLAAAIQLAKDYAHAQVHPAHIAFALLNEGTAEGGIAASGGTHQPTSLFSSV 65
Query: 50 INNAGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLA 109
+ AGG+ A +R + + +LPSQ+P PDE+ S T KV+R AQ QK D+++A
Sbjct: 66 VQKAGGDPAV--FKRALQRIIVRLPSQSPPPDEVTLSGTASKVLREAQNLQKTMHDSYIA 123
Query: 110 VDQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGR 169
D LI L++D+ + + KEAGV + +K+ +++LRG R+V+S + + F AL+ Y
Sbjct: 124 QDHLIAALVKDASLAPVLKEAGVTESTLKTAIDQLRGN--RRVDSKNAEQGFDALQKYAV 181
Query: 170 DLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRG 227
DL A GKLDPVIGRD EIRRV+RIL RRTKNNPVLIGEPGVGK+A+ EGLAQR+V
Sbjct: 182 DLTSLAEEGKLDPVIGRDNEIRRVIRILCRRTKNNPVLIGEPGVGKSAIAEGLAQRMVNR 241
Query: 228 DVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAE---GKVILFIDEIHLV 284
DVP++L RL +LDMGAL+AGAKY+GE+EER+K+VL EVE+A +ILFIDE+HL+
Sbjct: 242 DVPASLFG-RLYSLDMGALMAGAKYKGEYEERIKSVLNEVEKAADDGNPIILFIDELHLI 300
Query: 285 L-GAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPS 343
+ G G G MDAANLFKP+LARG+LRCIGATTL EYRKY+E DAA ERRF QV V EPS
Sbjct: 301 MAGRGSEGGGMDAANLFKPLLARGKLRCIGATTLAEYRKYIETDAALERRFAQVLVNEPS 360
Query: 344 VPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVR 403
VP+ +SILRGL+EKYE HHGVRI D AL+ AA L+ RY+T R LPD AIDLVDEACA+VR
Sbjct: 361 VPEAISILRGLREKYEVHHGVRILDGALIQAATLANRYLTSRRLPDSAIDLVDEACASVR 420
Query: 404 VQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRY 463
V ++ PE ID L+R++++LE+E+HALE+EKD ASK RLV RK + D+ ++L+PL+ +Y
Sbjct: 421 VTRETAPEAIDKLQRRKLELEVEIHALEREKDDASKERLVTARKNIADVDEQLRPLLAQY 480
Query: 464 KKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD 523
+ EKER EI+ L++K +EL EAERRYDLA A+DLRY A+ ++++ + QLE +++
Sbjct: 481 EAEKERGGEIQNLRRKMDELKAKADEAERRYDLATASDLRYYALPDLQSRLQQLEAKKAE 540
Query: 524 ENLML---TETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNA 569
E+ T+TV P+QIAE+V+RWT IPVTRL EKE+L +G EAV A
Sbjct: 541 EDAATGGGTDTVTPEQIAEIVARWTNIPVTRLMSTEKEKLLRMERTLAEQVVGQPEAVKA 600
Query: 570 VAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYME 629
VA ++ SR+GL Q+P SFLF GP+G GKT L+K LA LFD + ++RID SEY E
Sbjct: 601 VANAIRLSRSGLRNAQRPIASFLFAGPSGTGKTLLSKTLATILFDSPDAMIRIDGSEYSE 660
Query: 630 QHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRL 689
+HS+SRLIGAPPGYVGH+ GGQLTE +RR+PYS+VL DE+EKA LQVLDDGRL
Sbjct: 661 KHSISRLIGAPPGYVGHDAGGQLTEYIRRKPYSIVLIDEIEKASREFVTLFLQVLDDGRL 720
Query: 690 TDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLD 749
TDGQGR VDFRNTVIIMTSNLGA +L G V +V R+ V+ +R HF PE +NR+D
Sbjct: 721 TDGQGRVVDFRNTVIIMTSNLGAAYLNDMGEGAVKPEV-REMVMGAIRAHFPPEFINRID 779
Query: 750 EIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIR 809
+IV+F LS + + K+ L++K+V RL ER +AL + +AA +++ Y PIYGARP+
Sbjct: 780 DIVIFRTLSRKNVLKIIDLRIKEVQERLTERKMALDLDEAAKQYLVSIGYSPIYGARPLN 839
Query: 810 RWLEKKVVTELSRMLVREEIDENSTVYI 837
R ++ +++ LS M++ + I + TV +
Sbjct: 840 RAIQNELLNPLSVMILSDRIRDGETVRV 867
>gi|423065707|ref|ZP_17054497.1| ATP-dependent chaperone ClpB [Arthrospira platensis C1]
gi|406712761|gb|EKD07940.1| ATP-dependent chaperone ClpB [Arthrospira platensis C1]
Length = 872
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/855 (51%), Positives = 622/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
+P KFT K +A+A ++ A Q HL ALL A ++ N G + A+
Sbjct: 5 DPSKFTEKAWQALAQTPDIVKQAQQQQIETEHLMKALLEQDG--LANSLFNKAGISVAKV 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
E N + + P + TL ++ A+A ++ +GD +++V+ L+L +D+
Sbjct: 63 RESTEN-FINRQPKIKGNSTNVYLGRTLDTLLDNAEAYRQQYGDEYISVEHLLLAYTKDA 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G L++E + A+++ + ++RG + V + + ++AL+ YGRDL E A GKL
Sbjct: 122 RFGKTLYQEFRLDEAKLQQIITQIRGNQ--TVTDQNPEGKYEALEKYGRDLTEAARMGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L + +L
Sbjct: 180 DPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGDVPQSLQERKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMG+L+AGAK+RGEFEERLKAVLKEV ++EGK+ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGSLIAGAKFRGEFEERLKAVLKEVTDSEGKIILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D +LV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKISDSSLVAAATLSTRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + K+L +L+++ + L +++ EK I I+ LK+
Sbjct: 420 KILQLEMEKLSLQKESDTASQERLERLEKDLANLKEEQRTLSAQWESEKNTITHIQSLKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQ----EVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG ++ ++ A QL+ Q+ +L E V
Sbjct: 480 EIDRVNIEIQQAERNYDLNRAAELKYGTLEALKKQLHQAESQLQDTQTGGKTLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L +G EAV AVA+S+ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEKEKLLHLEDELHQRVVGQDEAVTAVADSIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E +VR+DMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PNRPVASFIFLGPTGVGKTELAKALASYLFDTEEAIVRVDMSEYMEKHSVSRLLGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDAQGRTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + R +V+ +R FRPE LNR+DEI++F L QLR
Sbjct: 720 IIMTSNIGSQYILDIAGDDSRYEEMRHRVMDSMRSAFRPEFLNRIDEIIIFHSLKPHQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ RLQ+ +++ RL + ++L ++++ALD + +DP+YGARP++R +++++ T++++
Sbjct: 780 EIVRLQLVNLSRRLEQHKMSLKLSESALDYLADVGFDPVYGARPLKRAIQRELETQIAKG 839
Query: 824 LVREEIDENSTVYID 838
++R E ++ +T+Y+D
Sbjct: 840 ILRGEFNDGNTIYVD 854
>gi|160936829|ref|ZP_02084194.1| hypothetical protein CLOBOL_01718 [Clostridium bolteae ATCC
BAA-613]
gi|158440210|gb|EDP17956.1| hypothetical protein CLOBOL_01718 [Clostridium bolteae ATCC
BAA-613]
Length = 863
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/869 (52%), Positives = 619/869 (71%), Gaps = 24/869 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ +LA G+ Q HL +LL+ + + I G +
Sbjct: 1 MNINKFTQKSMEAVQNCEKLAYEYGNQQIDEQHLLYSLLTLEDSLILKLITKMGIQGDMF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
S E QA+++LP + ++ S+ L KV+ + KA GD +++V+ L L LL+
Sbjct: 61 SNEA--KQAVERLP-KVSGSGQLYISSDLNKVLISGEDEAKAMGDEYVSVEHLFLSLLKH 117
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ +I LFK + + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 118 PNKEIKALFKLYNITRETFLQALSTVRGNQ--RVVSDNPEATYDTLAKYGYDLVERARDQ 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 176 KLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPDGLKDK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L ALDMGALVAGAKYRGEFEERLKAVL+EV++++G++ILFIDE+H ++GAG+TEGSMDA
Sbjct: 236 KLFALDMGALVAGAKYRGEFEERLKAVLEEVKKSDGQIILFIDELHTIVGAGKTEGSMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRGLKE
Sbjct: 296 GNMLKPMLARGELHCIGATTLNEYRQYIEKDAALERRFQPVMVDEPTVEDTISILRGLKE 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ ++D+ P E+D +
Sbjct: 356 RYEVFHGVKITDSALVSAATLSDRYITDRFLPDKAIDLVDEACAMIKTEMDTMPAELDEM 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK MQ+EIE AL+KE D+ S+ RL +++KEL +L D+ +++ EK +D + L
Sbjct: 416 SRKIMQMEIEEAALKKETDRLSQDRLADLQKELAELHDEFASKKAQWENEKASVDRLSSL 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+++ E + +Q+A+++YDL +AA+L+YG + E++ + E +E+L L E+V D
Sbjct: 476 REEIESVNREIQDAQQKYDLNKAAELQYGRLPELQKELQAEEERIRNEDLSLVRESVSED 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA +VS+WTGIPV +L ++E+ +R++G E V V +S++RS+AG+ P
Sbjct: 536 EIARIVSKWTGIPVAKLTESERSKTLHLDEVLHKRVVGQDEGVQLVTQSIIRSKAGIKDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALAE LFDDE+ ++RIDMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 TKPIGSFLFLGPTGVGKTELAKALAEALFDDESNIIRIDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT+I
Sbjct: 656 GYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTII 715
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
I+TSN+G+++LL G+ G + QV + V+ E+R HFRPE LNRLDE ++F PL+ +
Sbjct: 716 ILTSNIGSQYLLEGIDENGNIRPQV-ENMVMDELRAHFRPEFLNRLDETILFKPLTRMDI 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++ L + D+ RLA+R + + +T A + V + YDP YGARP++R+L+K V T +R
Sbjct: 775 ARIVDLCVADLNKRLADRELTIELTMGAKEFVTDKGYDPAYGARPLKRYLQKNVETLAAR 834
Query: 823 MLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+++ + + E ST+ ID L+ V+
Sbjct: 835 IILGDGVREGSTIVIDVDEDKTRLIAYVE 863
>gi|357054596|ref|ZP_09115678.1| chaperone ClpB [Clostridium clostridioforme 2_1_49FAA]
gi|355384196|gb|EHG31265.1| chaperone ClpB [Clostridium clostridioforme 2_1_49FAA]
Length = 863
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/869 (52%), Positives = 619/869 (71%), Gaps = 24/869 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ +LA G+ Q HL +LL+ + + + G +
Sbjct: 1 MNINKFTQKSMEAVQNCEKLAYEYGNQQIDEQHLLYSLLTLEDSLILKLVTKMGIQGDMF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
S E QA+++LP + ++ S+ L KV+ + KA GD +++V+ L L LL+
Sbjct: 61 SNEA--KQAVERLP-KVSGGGQLYISSDLNKVLISGEDEAKAMGDEYVSVEHLFLSLLKH 117
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ I LFK + + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 118 PNKDIKALFKLYNITRETFLQALSTVRGNQ--RVVSDNPEATYDTLAKYGYDLVERARDQ 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 176 KLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPDGLKDK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L ALDMGALVAGAKYRGEFEERLKAVL+EV++++G++ILFIDE+H ++GAG+TEGSMDA
Sbjct: 236 KLFALDMGALVAGAKYRGEFEERLKAVLEEVKKSDGQIILFIDELHTIVGAGKTEGSMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRGLKE
Sbjct: 296 GNMLKPMLARGELHCIGATTLNEYRQYIEKDAALERRFQPVMVDEPTVEDTISILRGLKE 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ ++D+ P E+D +
Sbjct: 356 RYEVFHGVKITDSALVSAATLSDRYITDRFLPDKAIDLVDEACAMIKTEMDTMPAELDEM 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK MQ+EIE AL+KE D+ S+ RL +++KEL +L D+ +++ EK +D + L
Sbjct: 416 SRKIMQMEIEEAALKKETDRLSQDRLADLQKELAELHDEFASKKAQWENEKASVDRLSAL 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+++ E + +Q+A+++YDL +AA+L+YG + E++ + E +E+L L E+V D
Sbjct: 476 REEIESVNREIQDAQQKYDLNKAAELQYGRLPELQKELQSEEERIRNEDLSLVRESVSED 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA +VS+WTGIPV +L ++E+ +R++G E V V +S++RS+AG+ P
Sbjct: 536 EIARIVSKWTGIPVAKLTESERSKTLHLDEILHKRVVGQDEGVQLVTQSIIRSKAGIKDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALAE LFDDE+ +VRIDMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 TKPIGSFLFLGPTGVGKTELAKALAEALFDDESNMVRIDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT+I
Sbjct: 656 GYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTII 715
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
I+TSN+G+++LL G+ G + +V + V+ E+R HFRPE LNRLDE ++F PL+ E +
Sbjct: 716 ILTSNIGSQYLLEGIDENGNIRPEV-ENAVMNELRAHFRPEFLNRLDETILFKPLTREDI 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++ L + D+ RLA+R + + +T A + V + YDP YGARP++R+L+K V T +R
Sbjct: 775 GRIVDLCVADLNKRLADRELTMELTAGAKEFVTDKGYDPAYGARPLKRYLQKNVETLAAR 834
Query: 823 MLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+++ + + E ST+ ID L+ V+
Sbjct: 835 IILGDGVREGSTIVIDVDEDKTRLIAYVE 863
>gi|239624651|ref|ZP_04667682.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521037|gb|EEQ60903.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 863
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/868 (52%), Positives = 624/868 (71%), Gaps = 22/868 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ +LA G+ Q HL +LL+ + + I G +
Sbjct: 1 MNINKFTQKSMEAVQNCEKLAYEYGNQQIDQQHLLYSLLTLDDSLILKLITKMGIQGDMF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
+ E QA+++L ++ ++ S L KV+ + KA GD +++V+ L L LL+
Sbjct: 61 TNEA--KQAVERL-TKVSGGGQLYISNDLNKVLINGEDEAKAMGDEYVSVEHLFLALLKH 117
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ +I +L K + + +RG + +V S + + T+ L+ YG DLVE+A
Sbjct: 118 PNKEIKELMKLYNITRETFLQALSTVRGNQ--RVVSDNPEATYDTLQKYGYDLVERARDQ 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP L D
Sbjct: 176 KLDPVIGRDSEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVGGDVPDGLKDK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L ALDMGALVAGAKYRGEFEERLKAVL+EV++++G++ILFIDE+H ++GAG+TEGSMDA
Sbjct: 236 KLFALDMGALVAGAKYRGEFEERLKAVLEEVKKSDGQIILFIDELHTIVGAGKTEGSMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRGLKE
Sbjct: 296 GNMLKPMLARGELHCIGATTLNEYRQYIEKDAALERRFQPVLVDEPTVEDTISILRGLKE 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LD+ P E+D +
Sbjct: 356 RYEVFHGVKITDSALVSAATLSDRYISDRFLPDKAIDLVDEACAMIKTELDTMPAELDEM 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK MQ+EIE AL+KE D+ S+ RL +++KEL +L D +++ EK +D + L
Sbjct: 416 SRKIMQMEIEEAALKKETDRLSQDRLADLQKELAELHDDFAARKAQWENEKASVDRLSSL 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+++ E + +Q+A++RYDL +AA+L+YG + +++ + E +E+L L E+V D
Sbjct: 476 REEIEAVNRDIQDAKQRYDLNKAAELQYGRLPQLQKELEAEEERVKNEDLSLVHESVTED 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA++VSRWTG+PV++L ++E+ ER++G E V V ES++RS+AG+ P
Sbjct: 536 EIAKIVSRWTGVPVSKLTESERSKTLHMDEVLHERVVGQDEGVEKVTESIIRSKAGIKDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALAE LFDDE+ +VRIDMSEYME+HSV+RLIGAPPGYV
Sbjct: 596 SKPIGSFLFLGPTGVGKTELAKALAEALFDDESNMVRIDMSEYMEKHSVARLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT+I
Sbjct: 656 GYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTII 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
I+TSN+G+++LL G+ G ++ A V+ ++R HFRPE LNRLDE+++F PL+ + +
Sbjct: 716 ILTSNIGSQYLLEGIDGSGQIRPEAETAVMNDLRVHFRPEFLNRLDEVILFKPLTKDNIS 775
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ L + D+ RL++R +++ +TD+A + YDP+YGARP++R+L+K V T +++
Sbjct: 776 RIVDLCVADLNKRLSDRELSIELTDSAKSFITERGYDPVYGARPLKRYLQKHVETLAAKL 835
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRVQ 851
++ + + E +T+ ID + G L+ V+
Sbjct: 836 ILGDGVREGNTIVIDVAEDGSRLIAYVE 863
>gi|414171579|ref|ZP_11426490.1| chaperone ClpB [Afipia broomeae ATCC 49717]
gi|410893254|gb|EKS41044.1| chaperone ClpB [Afipia broomeae ATCC 49717]
Length = 877
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/859 (53%), Positives = 609/859 (70%), Gaps = 21/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A LA GH QFTPLH+ LL D G+ I+ +GG + +
Sbjct: 1 MNIEKYTDRVKGFIQSAQTLAMREGHQQFTPLHILKVLLDDSEGLAGGLIDRSGGNS--R 58
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ + A+ K+P + A ++ + + A+ A + GD+ + V++L+ L
Sbjct: 59 AILKATEDALAKMPKVSGAGAGQVYLAPATARAFDAAEQAAEKAGDSFVTVERLLQALAA 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+DS G L + GV + + LR +GR +SAS + + ALK Y RDL + A
Sbjct: 119 DKDSDAGALLAKGGVTPQNFNAAINALR--KGRTADSASAENAYDALKKYARDLTQAAHD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIINGDVPEGLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
++++LDMGAL+AGAKYRGEFEERLKAVL EV ++G++ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKVLSLDMGALIAGAKYRGEFEERLKAVLSEVTSSDGQIILFIDEMHTLVGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ V+V+EP+V D VSILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDAVSILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+DN
Sbjct: 357 EKYELHHGVRITDSAIVAAATLSNRYITDRFLPDKAIDLIDEAAARLKMQIDSKPEELDN 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L+IE AL+KE D ASK RL + KEL DL +K L +++ E++++ ++
Sbjct: 417 IDREIVRLKIEQEALKKETDSASKDRLQRLEKELADLEEKGAALTAKWQSERDKLSNAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
+K + E+ L +A+RR + +A +L YG I E+E + LE ++ N++L E V
Sbjct: 477 VKSELEQARQELADAQRRGEFQKAGELAYGRIPELEKKLKALEESEKAGNVVLEEAVTSS 536
Query: 536 QIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+A+VVSRWTGIPV ++ G+ EK ER+IG AEAV+AV+ +V RSRAGL P
Sbjct: 537 HVAQVVSRWTGIPVDKMLEGEREKLLKMELQLAERVIGQAEAVSAVSTAVRRSRAGLQDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LFDDE LVR+DMSEYME+HSV+RLIGAPPGYV
Sbjct: 597 NRPIGSFMFLGPTGVGKTELTKALAEYLFDDETALVRMDMSEYMEKHSVARLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 657 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L+S G+ T V RDQV+ VR FRPE LNR+DEI++F L ++ +
Sbjct: 717 IMTSNLGSEFLVSQGEGEDTSAV-RDQVMAVVRASFRPEFLNRIDEIILFHRLQRTEMGR 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +QM+ + LA+R + L + D A D + A+ +DP YGARP++R +++ + L+ M+
Sbjct: 776 IVDIQMRRLLKLLADRKITLTLDDKARDWLAAKGWDPAYGARPLKRAIQRALQDPLAEMI 835
Query: 825 VREEIDENSTVYIDASPKG 843
+ I + V + A+ G
Sbjct: 836 LSGRIHDGENVAVSATDAG 854
>gi|269926323|ref|YP_003322946.1| ATP-dependent chaperone ClpB [Thermobaculum terrenum ATCC BAA-798]
gi|269789983|gb|ACZ42124.1| ATP-dependent chaperone ClpB [Thermobaculum terrenum ATCC BAA-798]
Length = 867
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/854 (53%), Positives = 610/854 (71%), Gaps = 23/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN + +T K EA+ A A + H+Q P HL ALL+ +GI I +AG ++ +
Sbjct: 1 MNVEGWTEKAREALIQAQREAENRSHSQIQPEHLLYALLTQENGIVPAVIRSAG--SSPE 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
RV + +LP + ++ S L ++I A+ + D +L+ + L+L L ED
Sbjct: 59 DVVRVLEAELSRLPRVSGTGVQVYLSPVLSRIISNAEREAQQMQDEYLSTEHLLLALCED 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
G + + G+ V + K+RG + KV + + +QAL+ YGRDL A GK
Sbjct: 119 MGTAGRILRSRGLDRNTVLQALSKVRGSQ--KVTDPNPEEKYQALEKYGRDLTALAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP +L + R
Sbjct: 177 LDPVIGRDEEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPESLKNCR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+I LD+ +VAG K+RGEFEERLKAVLKEV +EGK+ILFIDE+H V+GAG EG++DA
Sbjct: 237 IIQLDLAGMVAGTKFRGEFEERLKAVLKEVTSSEGKIILFIDELHTVVGAGAAEGAIDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPMLARG++R IGATTL+EYRKY+EKDAA ERRFQ VYV EPSV DT+SILRGL+E+
Sbjct: 297 NILKPMLARGEIRVIGATTLDEYRKYIEKDAALERRFQPVYVDEPSVEDTISILRGLRER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI+D ALV AA LS RYI+ R LPDKAIDLVDEA + +R+++DS P E+D LE
Sbjct: 357 YEVHHGVRIRDSALVAAAVLSHRYISDRFLPDKAIDLVDEAASKIRMEIDSMPVELDELE 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QLEIE AL+KE D+ASK RL + KEL DL++K + L M++++EK + EI +K
Sbjct: 417 RRILQLEIEREALKKETDEASKERLANLEKELADLKEKREALRMQWEREKSLLQEINSVK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTETVGPD 535
+ + + +++AER YD RAA L+Y + +E + +LE ++ EN M+ E V +
Sbjct: 477 ESIDRVKHEIEQAERNYDYNRAAQLKYSDLTNLERRLKELEEQLARTSENRMVQEEVTEE 536
Query: 536 QIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
IAEVVSRWTGIPV++L G+ EK +R++G EA++AVA ++ +RAGL P
Sbjct: 537 DIAEVVSRWTGIPVSKLLSGEVEKLIHMEEYLRQRVVGQDEAISAVANAIRAARAGLQDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTE A+ALAE LFDDE +VRIDMSEY E+HSV+RLIGAPPGYV
Sbjct: 597 NRPIGSFLFLGPTGVGKTETARALAEFLFDDERAMVRIDMSEYGEKHSVARLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EE GQLTEAVRRRPYSV+LFDEVEKAH V N LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 657 GYEEAGQLTEAVRRRPYSVILFDEVEKAHPEVLNILLQVLDDGRLTDGQGRTVDFRNTII 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG++ + M ++ R +V+ VR HFRPEL+NR+DEIV+F PL EQ+ +
Sbjct: 717 IMTSNLGSQWI---MEPGLSWDEVRSRVMDAVRAHFRPELINRIDEIVIFKPLGVEQIEQ 773
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ LQ+ + RL +R +++ +T +A + + YDP+YGARP++R ++K+VV L+ +
Sbjct: 774 IVELQLNSLRERLRDRHMSIELTPSAKEHLALAGYDPVYGARPLKRVIQKEVVQPLAMRI 833
Query: 825 VREEIDENSTVYID 838
++ E + T+ +D
Sbjct: 834 LQGEFKDGDTIIVD 847
>gi|255528348|ref|ZP_05395154.1| ATP-dependent chaperone ClpB [Clostridium carboxidivorans P7]
gi|296185567|ref|ZP_06853976.1| ATP-dependent chaperone protein ClpB [Clostridium carboxidivorans
P7]
gi|255507958|gb|EET84392.1| ATP-dependent chaperone ClpB [Clostridium carboxidivorans P7]
gi|296049695|gb|EFG89120.1| ATP-dependent chaperone protein ClpB [Clostridium carboxidivorans
P7]
Length = 870
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/859 (51%), Positives = 615/859 (71%), Gaps = 24/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K +A+ A +A H Q +HL AL+S G+ + G + A
Sbjct: 1 MDVEKLTIKVQKALNEAQLVAVRYNHQQIDTIHLFSALVSQEDGLIPNIFSKMGVDIRAL 60
Query: 61 SAERVFNQAMKKLPS---QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
E ++ + K+P + + A+ V +A+ K D++++V+ ++LGL
Sbjct: 61 KEET--SKTLDKMPKVLGEGAQNASLYATRRFEDVFVKAEKEAKKFKDSYISVEHVMLGL 118
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
+E ++ D+ + + S + K+RG + +VE+ + T++AL YGR+LVE+A
Sbjct: 119 MEVNSKEVQDILTKFNITKNDFLSALSKVRGNQ--RVETQDPEGTYEALVKYGRNLVEEA 176
Query: 176 GK--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
K LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIV+GD+P L
Sbjct: 177 KKHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVKGDIPEGL 236
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ + +LDMGAL+AGAK+RGEFEERLKAVLKEVE +EG++ILFIDEIH ++GAG+TEGS
Sbjct: 237 KNKIIFSLDMGALIAGAKFRGEFEERLKAVLKEVENSEGRIILFIDEIHTIVGAGKTEGS 296
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATT +EYRKY+EKD A ERRFQ V VAEP+V D++SILRG
Sbjct: 297 MDAGNLIKPMLARGELHCIGATTFDEYRKYIEKDKALERRFQPVVVAEPTVEDSISILRG 356
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE++E +HG+RI D A+V +A+LS RYIT R+LPDKAIDL+DEACA +R ++DS P ++
Sbjct: 357 LKERFEIYHGIRIHDSAIVASAKLSDRYITDRYLPDKAIDLIDEACAMIRTEIDSMPADM 416
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D ++RK QLEIE AL KEKD AS+ RL + KEL +L+DK + +Y+KEK +I EI
Sbjct: 417 DMVKRKIFQLEIEKEALSKEKDNASRERLKFLEKELSNLKDKDNEMTAKYEKEKSKIIEI 476
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG--NQSDENLMLTET 531
R LK++ + +++AER YDL + A+LRYG I ++E AI + E +++E+ ML E
Sbjct: 477 RNLKEQLDNARGDIEKAEREYDLNKVAELRYGLIPKLETAIKEKEKLIKENNEDAMLKEE 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAG 580
V +I++++S WTGIPV +L + E+ +R+IG EA+ AV+ +V+R+RAG
Sbjct: 537 VTEQEISQIISNWTGIPVAKLVEGERKKLLRLESELSQRVIGQKEAITAVSNAVIRARAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P++P GSF+FLGPTGVGKTELAK LA LFD E +VRIDMSEYME++SVSRLIGAP
Sbjct: 597 MKDPKRPIGSFIFLGPTGVGKTELAKTLARTLFDSEENIVRIDMSEYMEKYSVSRLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR PYSV+LFDE+EKAH VFN LQ+LDDGRLTD QG+ +DF+
Sbjct: 657 PGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNQGKVIDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
N +IIMTSN+G+ +LL Q RD+V+ E++ F+PE LNRLD+I++F PLS E
Sbjct: 717 NCIIIMTSNIGSSYLLENKEISGVEQHIRDRVMSEMKSRFKPEFLNRLDDIILFKPLSTE 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+++ + + ++D+ RL E+ ++L +T+AA ++ E YDP+YGARP++R++E + T +
Sbjct: 777 EIKDIISIFIEDIRKRLKEKNISLKITEAAKKLMAEEGYDPVYGARPLKRYIENVLETSI 836
Query: 821 SRMLVREEIDENSTVYIDA 839
++ +++ ++ E T+ +D
Sbjct: 837 AKKIIKGDVYEGCTIGVDV 855
>gi|332654878|ref|ZP_08420620.1| ATP-dependent chaperone protein ClpB [Ruminococcaceae bacterium
D16]
gi|332516221|gb|EGJ45829.1| ATP-dependent chaperone protein ClpB [Ruminococcaceae bacterium
D16]
Length = 876
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/858 (52%), Positives = 618/858 (72%), Gaps = 23/858 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE-NAA 59
MN ++FT K+ AI A ++A + G+ Q HL +AL+SD G Q + G +
Sbjct: 1 MNMNQFTQKSLAAIQGAQDIAQAHGNQQIEQEHLLLALVSDEQGFIPQLLTAMGMTVPSF 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
Q+A + K+ + D++ + + + + AQ A D +++V+ L+LGL+E
Sbjct: 61 QAAAADLVNKLPKVSGGSREADKVYVAQDVDRALTAAQEQASAMKDEYISVEHLLLGLME 120
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+S + +LF+ V +V + +RG + +V S + + T+ ALK YG DLV++A
Sbjct: 121 RPNSNLKELFRTYNVTKEKVMQALASVRGNQ--RVTSDNPEETYDALKKYGTDLVDRARQ 178
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD+EIR V+RILSR++KNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP++L D
Sbjct: 179 NKLDPVIGRDDEIRNVIRILSRKSKNNPVLIGEPGVGKTAIAEGLAQRIVKGDVPASLKD 238
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ +LDMG+L+AGAKYRGEFEERLKAVL EV+++EG++ILFIDE+H ++GAG+TEGSMD
Sbjct: 239 KTIFSLDMGSLIAGAKYRGEFEERLKAVLNEVKKSEGRIILFIDELHTIVGAGKTEGSMD 298
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V EPSV D ++ILRGLK
Sbjct: 299 AGNLLKPMLARGELHCIGATTLNEYRQYIEKDAALERRFQPVMVNEPSVEDAIAILRGLK 358
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE +HGV+I D A++ AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E+D
Sbjct: 359 ERYEVYHGVKITDGAIIAAATLSNRYITDRFLPDKAIDLVDEACAMIRTEMDSMPTELDI 418
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +Q EIE AL+KE DK S+ L E++KEL D+R++ ++ EK I ++++
Sbjct: 419 IQRKIIQHEIEEAALKKETDKISQEHLAEIQKELSDMREEFNAKKAQWDNEKNAIGKVQK 478
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLMLTETVG 533
L+++ E L++A+R YDL +AA+L+YG I E++ A+ E N+ + +L + V
Sbjct: 479 LREELEAANAQLEKAQREYDLNKAAELQYGKIPELKKALEAEEQIANEGKQRSLLRDKVT 538
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
++IA ++ RWTGIPV RL + E+E+L +G EAV V+E++LRSRAG+
Sbjct: 539 EEEIARIIERWTGIPVARLMEGEREKLLHLEDILHQRVVGQDEAVRLVSEAILRSRAGIA 598
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAK LAE LFD E LVRIDMSEYME+ SVSRLIGAPPG
Sbjct: 599 DPNKPIGSFLFLGPTGVGKTELAKTLAEALFDSEKNLVRIDMSEYMEKFSVSRLIGAPPG 658
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRR+PYSV+LFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT
Sbjct: 659 YVGYEEGGQLTEAVRRKPYSVILFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNT 718
Query: 703 VIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
+II+TSNLG++ LL G+ G+++ Q ARDQV + +++ FRPE LNRLDEIV + PL+ +
Sbjct: 719 IIILTSNLGSQFLLDGIGADGEIS-QEARDQVNELLKRSFRPEFLNRLDEIVFYKPLTKD 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + L + D+ RL+++ + + +T AA D ++ +YDPIYGARP+RR+L+ V T +
Sbjct: 778 NVTHIIDLMVADINRRLSDKQLTVELTPAAKDFIIDSAYDPIYGARPLRRYLQHTVETLI 837
Query: 821 SRMLVREEIDENSTVYID 838
SR ++ ++++ + +D
Sbjct: 838 SRKIIADQVESGQRLTVD 855
>gi|434404939|ref|YP_007147824.1| ATP-dependent chaperone ClpB [Cylindrospermum stagnale PCC 7417]
gi|428259194|gb|AFZ25144.1| ATP-dependent chaperone ClpB [Cylindrospermum stagnale PCC 7417]
Length = 895
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/855 (51%), Positives = 622/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP+KFT K EAIA ++ Q HL ALL A AI G N +
Sbjct: 28 NPNKFTEKAWEAIAHTQDVVKQYHQQQIESEHLMKALLEQDG--LASAIFTKAGANEQKV 85
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R +Q +++ P + + + +L ++ RA A ++ D +++++ L+L +D
Sbjct: 86 RDRT-DQFLRRQPKVSGSSSSVYLGRSLDTLLDRADAYRQEFKDEYISIEHLVLAYAKDD 144
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E G+ ++K+ ++++RG + KV S + +Q+L+ YGRDL E A G+L
Sbjct: 145 RFGKGLFQEFGLDEGKLKNIIKQIRGSQ--KVTDQSPEGKYQSLEKYGRDLTEAARKGQL 202
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D L
Sbjct: 203 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRML 262
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAK+RGEFEERLKAVLKEV E+ G ++LFIDEIH V+GAG T+G+MDA N
Sbjct: 263 ISLDMGALIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGN 322
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRK++EKDAA ERRFQQVYV +P++ DT+SILRGLKE+Y
Sbjct: 323 LLKPMLARGELRCIGATTLDEYRKHIEKDAALERRFQQVYVDQPNIEDTISILRGLKERY 382
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D +LV AA LS+RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 383 EVHHGVKISDSSLVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 442
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL ++ KEL DL+++ + L +++ EK+ I++I+ +K+
Sbjct: 443 KILQLEMEKLSLQKESDVASRERLEKIEKELADLKEEQRTLSSQWQSEKDIINKIQSVKE 502
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG + +++EA +L Q +L E V
Sbjct: 503 EIDRVNLEIQQAERNYDLNRAAELKYGKLTSLHRQLEAVEAELTQAQGSGKSLLREEVTE 562
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L +G AEAV AVA+++ RSRAGL
Sbjct: 563 ADIAEIISKWTGIPISKLVESEKEKLLHLEDELHRRVVGQAEAVTAVADAIQRSRAGLAD 622
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA +FD E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 623 PNRPIASFVFLGPTGVGKTELAKALAAYMFDTEESLVRIDMSEYMEKHTVSRLIGAPPGY 682
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QG TVDF+N +
Sbjct: 683 VGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDFKNCI 742
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L +V++ +R FRPE LNR+DEI++F L +LR
Sbjct: 743 IIMTSNIGSQYILDIAGDDSRYDEMHRRVMEAMRNSFRPEFLNRIDEIIIFHSLQKSELR 802
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ LQ++ + RL++R ++L ++DAALD + YDP++GARP++R +++++ T++++
Sbjct: 803 RIVLLQVERLRQRLSDRKMSLRLSDAALDFLAEVGYDPVFGARPLKRAIQRELETQIAKA 862
Query: 824 LVREEIDENSTVYID 838
++R E ++ T+++D
Sbjct: 863 ILRGEFNDGDTIFVD 877
>gi|54035876|sp|Q8YM56.2|CLPB2_ANASP RecName: Full=Chaperone protein ClpB 2
Length = 872
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/858 (51%), Positives = 626/858 (72%), Gaps = 29/858 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSD---PSGIFAQAINNAGGENA 58
NP++FT K EAIA E+A Q HL ALL SGI +A G N
Sbjct: 5 NPNQFTEKAWEAIAHTPEIAKQHQQQQIESEHLMKALLEQDGLASGILTKA-----GVNL 59
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++R Q +++ P + + +L ++ RA+A +K D +++++ L+L
Sbjct: 60 QKISDRT-EQYIQRQPKVSGNSTSVYLGRSLDTLLDRAEAHRKDFQDEYISIEHLLLAYP 118
Query: 119 EDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D + G LF+E + +++K+ ++++RG + V + + +Q+L+ YGRDL E A
Sbjct: 119 KDDRFGKGLFQEFALDESKLKNIIKQVRGSQ--TVTDQNPEGKYQSLEKYGRDLTEAARK 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
G+LDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D
Sbjct: 177 GQLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LI+LDMGA++AGAK+RGEFEERLKAVLKEV E+ G ++LFIDEIH V+GAG T+G+MD
Sbjct: 237 RKLISLDMGAMIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLK
Sbjct: 297 AGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGV+I D +LV AA LS+RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D
Sbjct: 357 ERYEVHHGVKISDSSLVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +L+KE D AS+ RL + KEL DL+++ + L +++ EK+ I++++
Sbjct: 417 IDRKILQLEMEKLSLQKESDAASRERLERLEKELADLKEEQRTLNTQWQSEKDVINKLQS 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTET 531
+K++ +++ +Q+AER YDL RAA+L+YG + + +EA +L Q +L E
Sbjct: 477 VKEEIDKVNLEIQQAERNYDLNRAAELKYGNLTDLHRRLEATERELSQTQGTGKSLLREE 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V IAE++S+WTGIP+++L ++EKE+L IG EAV AVA+++ RSRAG
Sbjct: 537 VTEADIAEIISKWTGIPISKLVESEKEKLLHLEDELHHRVIGQDEAVTAVADAIQRSRAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +PT SF+FLGPTGVGKTELAKALA +FD E+ LVRIDMSEYME+H+VSRLIGAP
Sbjct: 597 LADPNRPTASFVFLGPTGVGKTELAKALASYMFDTEDALVRIDMSEYMEKHAVSRLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTE +RRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QG TVDF+
Sbjct: 657 PGYVGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSN+G++++L R +V++ +R FRPE LNR+DE+++F L +
Sbjct: 717 NTIIIMTSNIGSQYILDIAGDNSRYDEMRHRVMEAMRNSFRPEFLNRIDEVIIFHSLDKK 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+LR++ +LQ++ + RL +R ++L ++D ALD + YDP++GARP++R +++++ T++
Sbjct: 777 ELRQIVQLQVERLKARLDDRKISLRLSDVALDFLAEVGYDPVFGARPLKRAIQRELETQI 836
Query: 821 SRMLVREEIDENSTVYID 838
++ ++R E ++ T+++D
Sbjct: 837 AKAILRGEFNDGDTIFVD 854
>gi|423720917|ref|ZP_17695099.1| ATP-dependent chaperone clpB [Geobacillus thermoglucosidans
TNO-09.020]
gi|383366270|gb|EID43561.1| ATP-dependent chaperone clpB [Geobacillus thermoglucosidans
TNO-09.020]
Length = 865
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/879 (53%), Positives = 623/879 (70%), Gaps = 43/879 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSG----IFAQAINNAGGE 56
MN +KFT K EA A ++AT H Q HL ALL G IF N G
Sbjct: 1 MNANKFTEKVQEAFLEAQKIATRHHHQQLDLEHLLFALLQQEEGLAGRIFTLLHVNIGA- 59
Query: 57 NAAQSAERVFNQAMKKLPSQTP-----APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVD 111
F ++ L + P + + S L +++ +A+ K D +++V+
Sbjct: 60 ---------FIHELEALLKKKPEVLGAGAENLYMSQRLQRLLAKAEKEAKNMQDEYISVE 110
Query: 112 QLILGLLEDSQ-IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRD 170
L+L E++ IG LF+ + + + + ++RG + +V S + + T++ALK YGRD
Sbjct: 111 HLLLAFTEETDDIGRLFQRYNINRSSLLRVLTEIRGNQ--RVTSPNPEVTYEALKKYGRD 168
Query: 171 LVEQ--AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD 228
LV + AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR D
Sbjct: 169 LVAEVKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKD 228
Query: 229 VPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAG 288
VP L D + ALDM +LVAGAK+RGEFEERLKAVL E++++EG++ILFIDE+H ++GAG
Sbjct: 229 VPEGLKDKTIFALDMSSLVAGAKFRGEFEERLKAVLNEIKKSEGRIILFIDELHTIVGAG 288
Query: 289 RTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTV 348
R EG+MDA N+ KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQQV V EPSV DT+
Sbjct: 289 RAEGAMDAGNMLKPMLARGELHCIGATTLDEYRQYIEKDPALERRFQQVLVEEPSVEDTI 348
Query: 349 SILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDS 408
SILRGL+E++E HHGV+I DRALV AA L+ RYI+ R LPDKAIDLVDEACA +R ++DS
Sbjct: 349 SILRGLRERFEVHHGVKIHDRALVAAATLADRYISDRFLPDKAIDLVDEACATIRTEMDS 408
Query: 409 QPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKE 468
P E+D + R+ MQLEIE AL KE D+ASK RL + KEL DLR+K + M++++EKE
Sbjct: 409 MPSELDEVMRRVMQLEIEEAALRKETDEASKERLAALTKELADLREKADSMKMQWQQEKE 468
Query: 469 RIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN--- 525
I +R +++ E+ L+EAE YDL RAA+LR+G I ++E + QLE S+ N
Sbjct: 469 AIQRVRDVREALEKAKRELEEAENEYDLNRAAELRHGRIPQLEKQLKQLEQEMSENNKEG 528
Query: 526 LMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKER-----------LIGLAEAVNAVAESV 574
+L E V ++IAE+VSRWTGIP+TRL + E+E+ +IG EAV VA++V
Sbjct: 529 RLLREEVTEEEIAEIVSRWTGIPLTRLVEGEREKLLRLHELLHERVIGQDEAVELVADAV 588
Query: 575 LRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVS 634
LR+RAG+ P +P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME+H+VS
Sbjct: 589 LRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAHALFDSEEQMIRIDMSEYMEKHAVS 648
Query: 635 RLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQG 694
RLIGAPPGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGR+TD QG
Sbjct: 649 RLIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHPEVFNILLQLLDDGRITDSQG 708
Query: 695 RTVDFRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIV 752
RTVDF+NTV+IMTSN+G+ LL G+ GK+ + R+QVLQ++R HFRPE LNR+D+IV
Sbjct: 709 RTVDFKNTVVIMTSNIGSHLLLEGVTEDGKIKEE-TREQVLQQLRAHFRPEFLNRIDDIV 767
Query: 753 VFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWL 812
+F PLS +++ + ++++ RL +R + L +T+AA + +DP+YGARP++R++
Sbjct: 768 LFKPLSVNEVKGIVEKFARELSRRLTDRHIELVLTEAAKQYIAEAGFDPVYGARPLKRFM 827
Query: 813 EKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+K++ T L++ L+ + + STV +DA + LV R Q
Sbjct: 828 QKQIETPLAKELIAGRVKDYSTVIVDA--ENGRLVIRPQ 864
>gi|303249131|ref|ZP_07335371.1| ATP-dependent chaperone ClpB [Desulfovibrio fructosovorans JJ]
gi|302489456|gb|EFL49403.1| ATP-dependent chaperone ClpB [Desulfovibrio fructosovorans JJ]
Length = 866
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/862 (53%), Positives = 621/862 (72%), Gaps = 29/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ +AI+ A A G Q HL ALL+ GI + ++ AG
Sbjct: 1 MDLNKFTQKSQQAISEAQAAAVRMGQQQVDAEHLLYALLTQEQGIVPRILDKAGYNTDTY 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
AE + + +LP + P ++ + L +++ +AQ K D +++V+ L L
Sbjct: 61 LAE--LEKGLSRLPKVSGPGSQPGQVYVTPRLNEILVKAQDLAKHLKDEYVSVEHLFLAF 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
L++ + G + K GV RV + + ++RG G++V SA + T++AL YGRDLV+
Sbjct: 119 LDEPPSTLAGQVNKSLGVDKNRVLAALTEIRG--GQRVTSADPEGTYEALTKYGRDLVDA 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GK+DPVIGRDEEIRRV+RILSRRTKNNPV+IGE GVGKTA+VEGLA RIV DVP
Sbjct: 177 AKKGKIDPVIGRDEEIRRVIRILSRRTKNNPVVIGEAGVGKTAIVEGLAMRIVNKDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L + + ALDMG+L+AGAKYRGEFEERLKAVLKEV+ +EG++ILFIDE+H ++GAG+TEG
Sbjct: 237 LKEKTIFALDMGSLIAGAKYRGEFEERLKAVLKEVQTSEGRIILFIDELHTIVGAGKTEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA NL KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V+V EPSV DT+SILR
Sbjct: 297 SMDAGNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVFVDEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGVRI D A+V AA LS+RYI+ R LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLRERFEVHHGVRISDSAVVEAAVLSSRYISDRQLPDKAIDLIDEAAAMIRTEIDSLPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK MQLEIE AL++E DKAS+ RL ++ +EL +L+++ + +++KEK ++
Sbjct: 417 LDQINRKVMQLEIEREALKRETDKASRERLEKLEEELANLKEEQSGYLTQWEKEKGAVEG 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLEG--NQSDENLMLT 529
+RR+K+ E+ A++EAER YDL RAA+LRYG + +E + GQ E + ++
Sbjct: 477 LRRIKEDIEKTRLAIEEAERAYDLNRAAELRYGTLANLEKELTGQEEAITKAAGGTRLIR 536
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSR 578
E VGPD +A V+SRWTGIPVTRL ++E+E+L+ LA EAV AVA++VLR+R
Sbjct: 537 EEVGPDDVAMVISRWTGIPVTRLMESEREKLLRLADLLHARVVGQDEAVTAVADAVLRAR 596
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P GSF+FLGPTGVGKTEL K LA LFD E +VR+DMSEYME+H+V+RLIG
Sbjct: 597 AGLKDPHRPIGSFIFLGPTGVGKTELCKTLAAALFDTEENMVRLDMSEYMERHTVARLIG 656
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGY+G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQ+LDDGRLTD GRTVD
Sbjct: 657 APPGYIGYDEGGQLTEAVRRKPYSVVLFDEIEKAHSDVFNTLLQILDDGRLTDSHGRTVD 716
Query: 699 FRNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
F+NT+IIMTSNLGA+++L G+ G+ VA +QV+ +R FRPE LNR+DEIV+F P
Sbjct: 717 FKNTIIIMTSNLGAQYMLDGIDPSGEFRPGVA-EQVMNTLRGQFRPEFLNRVDEIVLFKP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L EQ+ + L + + RLA+R ++L +TD A + +YDP++GARP+RR+L+ V
Sbjct: 776 LLREQIAAIVELMLGGLRARLADRKISLELTDVAKAYIAETAYDPVFGARPLRRYLQAHV 835
Query: 817 VTELSRMLVREEIDENSTVYID 838
T L++ L+ ++ + +V +D
Sbjct: 836 ETPLAKALIGGQVSDGQSVTVD 857
>gi|218245816|ref|YP_002371187.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 8801]
gi|257058862|ref|YP_003136750.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 8802]
gi|218166294|gb|ACK65031.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 8801]
gi|256589028|gb|ACU99914.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 8802]
Length = 872
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/855 (52%), Positives = 619/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAI ++A H Q HL +LL G+ N A + + Q
Sbjct: 5 NPNQFTEKAWEAIVRTPDIAKQHSHQQIETEHLMNSLLQQ-EGLATSVFNKA--DISVQR 61
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ +++ P + + + +L +++ RA+ ++ GD +++++ L+L +D
Sbjct: 62 LRDKTEEFIRRQPKVSNPGESVYLGRSLDQLLDRAEQFRQEFGDDYISIEHLLLAYTKDD 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LFKE + ++K ++++RG + KV + + +++L+ YGRDL + A GKL
Sbjct: 122 RFGQGLFKEFSLNETKLKEIIKQVRGTQ--KVTDQNPEGKYESLEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLRDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFEERLKAVLKEV +++G +I+FIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKYRGEFEERLKAVLKEVTDSQGNIIMFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 ELHHGVKIADTALVAAAMLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE+DKAS+ RL ++ KEL DL+++ L +++ EK IDEIR++K
Sbjct: 420 KILQLEMERLSLQKEEDKASRERLEKLEKELADLKEQQSQLNAQWQAEKGVIDEIRQVKG 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLM----LTETVGP 534
+++ +Q+AER YDL +AA+LRYG + +++ I +LE + +M L E V
Sbjct: 480 AIDQINLEIQQAERDYDLNKAAELRYGKLTDLQRKIKELETKIEERQIMGKTLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L IG EAV AV+E++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPLSKLVESEKEKLLQLEDELHERVIGQEEAVTAVSEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA+ LFD E LVRIDMSEYME+H+VSRL+GAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEYMEKHAVSRLLGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHNDVFNVMLQILDDGRLTDAQGHVVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + R +V++ + FRPE LNR+DEI++F L QLR
Sbjct: 720 IIMTSNIGSQYILDVAGDDSRYEEMRSRVMEAMTNSFRPEFLNRIDEIIIFHGLQKSQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ+ + RL+E+ + L +++ ALD V YDP+YGARP++R ++K + T +++
Sbjct: 780 EIIKLQVALLETRLSEQKIYLKLSEEALDFVAEIGYDPVYGARPLKRAIQKYLETAIAKS 839
Query: 824 LVREEIDENSTVYID 838
++R E T+++D
Sbjct: 840 ILRGEFKAGDTIFVD 854
>gi|225420079|ref|ZP_03762382.1| hypothetical protein CLOSTASPAR_06422 [Clostridium asparagiforme
DSM 15981]
gi|225041335|gb|EEG51581.1| hypothetical protein CLOSTASPAR_06422 [Clostridium asparagiforme
DSM 15981]
Length = 863
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/869 (52%), Positives = 619/869 (71%), Gaps = 24/869 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ +LA G+ Q HL ALL+ + + + G +
Sbjct: 1 MNINKFTQKSMEAVQNCEKLAYEYGNQQIDQEHLLYALLTLEDSLILKLVTKMGIQGDML 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E QA++KLP + ++ S L KV+ A+ K+ GD +++V+ L L L++
Sbjct: 61 KNE--VKQALEKLP-KVSGGGQLYISNDLNKVLINAEDEAKSMGDEYVSVEHLFLALIKH 117
Query: 121 SQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ +L K + + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 118 PSRAVKNLLKMYNITRETFLQALSTVRGNQ--RVVSDNPEATYDTLTKYGYDLVERAREQ 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 176 KLDPVIGRDSEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPDGLKDK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L ALDMG+LVAGAKYRGEFEERLKAVL+EV++++G++ILFIDE+H ++GAG+TEGSMDA
Sbjct: 236 KLFALDMGSLVAGAKYRGEFEERLKAVLEEVKKSDGQIILFIDELHTIVGAGKTEGSMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL EYRKY+EKDAA ERRFQ V V EP+V DT+SILRGLKE
Sbjct: 296 GNMLKPMLARGELHCIGATTLNEYRKYIEKDAALERRFQPVLVDEPTVEDTISILRGLKE 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LD+ P E+D +
Sbjct: 356 RYEVFHGVKITDSALVSAATLSDRYITDRFLPDKAIDLVDEACAMIKTELDTLPAELDEM 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK MQ+EIE AL+KE D S+ RL +++KEL +L D+ +++ EK +D + L
Sbjct: 416 SRKIMQMEIEEAALKKETDHLSQDRLADLQKELAELHDEFAARKAQWENEKASVDRLSAL 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+++ E + +Q+A++RYDL +AA+L+YG + +++ + + E +E+L L E+V D
Sbjct: 476 REEIETVNRQIQDAQQRYDLNKAAELQYGKLPQLQKELAEEEERVRNEDLSLVRESVTED 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA ++SRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+ P
Sbjct: 536 EIARIISRWTGIPVAKLTESERSKTLHLDDLLHKRVIGQEEGVEKVTEAIIRSKAGIKDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALAE LFDDE +VRIDMSEYME+HSV+RLIGAPPGYV
Sbjct: 596 TKPIGSFLFLGPTGVGKTELAKALAEALFDDEGNMVRIDMSEYMEKHSVARLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT+I
Sbjct: 656 GYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTII 715
Query: 705 IMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
I+TSN+G+++LL G+ G++ + A V+ ++R HFRPE LNRLDE+++F PL+ E +
Sbjct: 716 ILTSNIGSQYLLEGIGEDGRIRPE-AETAVMNDLRAHFRPEFLNRLDEVILFKPLTRENI 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L + D+ RLA+R + + +T A + V+ YDP+YGARP++R+L+K V T ++
Sbjct: 775 GGIVDLCVADLNRRLADRELTIELTAQAKEFVIERGYDPVYGARPLKRYLQKHVETLAAK 834
Query: 823 MLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+++++ + +T+ ID S D L+ V+
Sbjct: 835 IILQDGVRAGNTIVIDVSEHQDRLIAYVE 863
>gi|357385913|ref|YP_004900637.1| ClpB protein [Pelagibacterium halotolerans B2]
gi|351594550|gb|AEQ52887.1| ClpB protein [Pelagibacterium halotolerans B2]
Length = 871
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/878 (53%), Positives = 619/878 (70%), Gaps = 23/878 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T +T I A ++A S GH QFTPLH+ L+ DP G+ I AGG AQ
Sbjct: 1 MNIEKYTERTRGFIQSAQQMALSRGHQQFTPLHILKVLVDDPEGMATGLIERAGGN--AQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
+ + +KKLPS + +I S L +V A+AA + GD+ +AV++++L L
Sbjct: 59 AVRAGVEEGLKKLPSVSGDSGQIYLSRELARVFETAEAAAQKAGDSFVAVERMLLALTIE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+D+ G + AGV + + +E +R +GR +SAS + T+ ALK Y RDL E A G
Sbjct: 119 KDTDAGKVLASAGVTANGLNAAIEAIR--KGRTADSASAENTYDALKKYARDLTEDAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L +
Sbjct: 177 KLDPVIGRDEEIRRAIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKNK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
L+ALDMGAL+AGAKYRGEFEERLK+VL EV+ AEG++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 SLLALDMGALIAGAKYRGEFEERLKSVLSEVQSAEGQIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EY+K+VEKDAA RRFQ V+V EPSV DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYKKHVEKDAALARRFQPVFVNEPSVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA A +R+ +DS+PE +D L
Sbjct: 357 KYELHHGVRISDSALVSAATLSNRYITDRFLPDKAIDLMDEASARLRMAVDSKPEALDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL+KE D ASK RL + EL L ++ + R+ EKER+ +L
Sbjct: 417 DRRIIQLKIEREALKKEDDDASKTRLARLEAELAGLEEESDAMTQRWLSEKERLAGGTKL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL-MLTETVGPD 535
K++ + L+ A+R+ DLARA +L YG I ++E + E +++ M+ E V P+
Sbjct: 477 KEQLDAARTELELAQRKGDLARAGELAYGVIPDLERRLADAEAHEAQPGSDMVEEVVTPN 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + E+++L IG +EAV AV+ +V R+RAGL P
Sbjct: 537 HIAQVVSRWTGVPVDKMLEGERDKLLRMEDELAKRVIGQSEAVEAVSRAVRRARAGLQDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALA+ LFDDE +VR+DMSE+ME+H+V+RLIGAPPGYV
Sbjct: 597 NRPIGSFMFLGPTGVGKTELTKALAQFLFDDETAMVRLDMSEFMEKHAVARLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQG TVDFRNT+I
Sbjct: 657 GYDEGGVLTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGHTVDFRNTLI 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E+L + G+ ++++ R +VL V+ FRPE LNR+DEI++F L Q+
Sbjct: 717 IMTSNLGSEYLAAQPDGE-SVELVRGKVLDTVKASFRPEFLNRVDEILLFHRLERSQMGA 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+K + L R +++ VT AA D + E YD YGARP++R +++ V EL+ +
Sbjct: 776 IVDIQLKRLQKLLDAREISIEVTPAARDWLANEGYDSAYGARPLKRVIQRSVQDELAEKM 835
Query: 825 VREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATG 862
+ ++ + TV +DA D LV G VD A G
Sbjct: 836 LAGDVADGGTVKVDAGE--DGLVILPVVEGEVVDTAAG 871
>gi|126656761|ref|ZP_01727975.1| ClpB protein [Cyanothece sp. CCY0110]
gi|126621981|gb|EAZ92689.1| ClpB protein [Cyanothece sp. CCY0110]
Length = 872
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/855 (51%), Positives = 622/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAI ++A Q HL +L ++ G+ A +I N + +
Sbjct: 5 NPNQFTEKAWEAIVRTPDIAKQNSQQQIESEHLMKSL-TEQEGL-ATSIFNKANISVPKL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + +++ P + + + +L ++ R++ +K D +++++ L+L +D
Sbjct: 63 RDRT-EEFIRRQPKVSNPGESVYLGRSLDSLLDRSEKFRKEFEDDYISIEHLLLAYSKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G +LFKE G++ +K ++++RG + KV + + +++L+ YGRDL + A GKL
Sbjct: 122 RFGKNLFKEFGLSENNLKEIIKQVRGNQ--KVTDQNPENKYESLEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLRDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMG+L+AGAKYRGEFEERLKAVLKEV +++G +ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGSLIAGAKYRGEFEERLKAVLKEVTDSQGNIILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVNEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDE+ A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADTALVAAAMLSNRYISDRFLPDKAIDLVDESAAKLKMEITSKPEELDEVDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE+D+ S+ RL ++ KEL DL+++ L +++ EKE ID+IR LK+
Sbjct: 420 KILQLEMERLSLQKEEDEVSRERLEKLEKELADLKEEQSQLNAQWQAEKEVIDQIRELKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTETVGP 534
+++ +Q+AER YDL +AA+LRYG + +++ + LE Q+ +L E V
Sbjct: 480 TIDQVNLEIQQAERDYDLNKAAELRYGKLTDLQRQVKDLESKIEERQTTGKTLLREEVVE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L IG EAV AV+E++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEKEKLLQLEDELHERVIGQEEAVTAVSEAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA+ LFD E +VRIDMSEYME+HSVSRLIGAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEAIVRIDMSEYMEKHSVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QGR VDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNIMLQILDDGRLTDSQGRVVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L R +V+ +R +FRPE LNR+DEI++F L EQLR
Sbjct: 720 IIMTSNIGSQYILDVAGDDTRYDEMRSRVMDAMRNNFRPEFLNRIDEIIIFHSLQKEQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ++ + RL ++ ++L + D ALD V YDP+YGARP++R +++ + T +++
Sbjct: 780 EIVKLQIQLLRNRLEDQKMSLKLADVALDFVADIGYDPVYGARPLKRAVQRYLETPIAKS 839
Query: 824 LVREEIDENSTVYID 838
++R E T++ D
Sbjct: 840 ILRGEFKAGDTIFAD 854
>gi|428224381|ref|YP_007108478.1| ATP-dependent chaperone ClpB [Geitlerinema sp. PCC 7407]
gi|427984282|gb|AFY65426.1| ATP-dependent chaperone ClpB [Geitlerinema sp. PCC 7407]
Length = 885
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/866 (52%), Positives = 620/866 (71%), Gaps = 34/866 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA +L Q HL ALL + G+ A +N AG + Q
Sbjct: 5 NPNQFTEKAWEAIARTPDLVKQGHQQQIESEHLMKALL-EQEGLVASVLNKAGIQ--VQR 61
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ + + P + + D + +L ++ RA+A +K GD +++V+ L+L +D
Sbjct: 62 WRDRTEEFIARQPKVSGSSDAVYLGRSLDTLLDRAEAHRKEFGDEYISVEHLLLSYPKDD 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G L +E + ++ V +RG + KV + + +Q+L+ YGRDL A GKL
Sbjct: 122 RFGKALCQEFKLDEPSLRKIVNDIRGNQ--KVTDQNPEGKYQSLEKYGRDLTAYAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D RL
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVSGDVPQSLRDRRL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFEERLKAVLKEV E+ G++ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKYRGEFEERLKAVLKEVTESGGQIILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPTVEDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDE+ A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKISDSALVAAATLSTRYISDRFLPDKAIDLVDESAAKLKMEITSKPEELDEVDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + +EL DL+++ + L +++ EK+ ID+I+ LK+
Sbjct: 420 KVLQLEMERLSLQKESDPASRDRLERLERELADLKEEQRTLNGQWQAEKDVIDQIQSLKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG + E++ I QL Q+ +L E V
Sbjct: 480 ESDRVNIEIQQAERDYDLNRAAELKYGKLTELQRQIKVAEEQLAHTQTSGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIPV++L ++E +R+IG EAV AVA+++ RSRAGL
Sbjct: 540 ADIAEIISKWTGIPVSKLVESEMQKLLNLEEELHQRVIGQDEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E+ +VRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALAAFLFDTEDAMVRIDMSEYMEKHTVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD QG TVDF NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDAQGHTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKV---------TMQV--ARDQVLQEVRKHFRPELLNRLDEIV 752
IIMTSN+G++++L V T+Q + +V+ +R FRPE LNR+DEI+
Sbjct: 720 IIMTSNIGSQYILDLPSSAVSATSGTEDDTLQYEEMKSRVMDALRSSFRPEFLNRIDEII 779
Query: 753 VFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWL 812
+F L Q+R++ RLQ ++ RLA+R + L ++DAALD + YDP+YGARP++R +
Sbjct: 780 IFHRLYKTQIRQIVRLQTLRLSERLADRKMTLKLSDAALDFLADVGYDPVYGARPLKRAI 839
Query: 813 EKKVVTELSRMLVREEIDENSTVYID 838
++++ T++++ ++R E T+++D
Sbjct: 840 QRELETQIAKRILRGEFLAGDTIFVD 865
>gi|334119144|ref|ZP_08493231.1| ATP-dependent chaperone ClpB [Microcoleus vaginatus FGP-2]
gi|333458615|gb|EGK87232.1| ATP-dependent chaperone ClpB [Microcoleus vaginatus FGP-2]
Length = 871
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/855 (52%), Positives = 628/855 (73%), Gaps = 25/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EA+A E+ +A Q HL ALL SG+ A ++ N G A+
Sbjct: 5 NPNQFTEKAWEALARTPEIVKAAQQQQLESEHLMKALLEQESGL-ASSLFNKAGVAVAKL 63
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R ++ + + P + + + +L ++ RA+ +K +GD ++++ LILG ++D
Sbjct: 64 RDRT-DEFISRQPKISGSGGNVYLGRSLDTLLDRAETYRKDYGDEFISIEHLILGYVKDD 122
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G +L +E + A++K + ++RGK KV + + ++AL+ YGRDL E A GKL
Sbjct: 123 RFGKNLLQEFKLDEAKLKDIITQVRGK--NKVTDQNPEGKYEALEKYGRDLTEAARQGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D +L
Sbjct: 181 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIITGDVPQSLKDRQL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAK+RGEFEERLKAVLKEV ++ GKVILFIDEIH V+GAG T+GSMDA N
Sbjct: 241 ISLDMGALIAGAKFRGEFEERLKAVLKEVTDSNGKVILFIDEIHTVVGAGATQGSMDAGN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P+V DTVSILRGLKE+Y
Sbjct: 301 LLKPMLARGELRCIGATTLDEYRKYLEKDAALERRFQQVYVDQPTVEDTVSILRGLKERY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 361 EVHHGVKISDSALVAAATLSTRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+ +QLE+E +L+KE + AS RL + K+L +L+++ L +++ EK I I+++K+
Sbjct: 421 RILQLEMERLSLQKESNLASIERLERLEKDLANLKEQQNALNAQWQSEKGVIGSIQKIKE 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ +++ +Q++E +YDL RAA+L+YG + ++++ A QL Q+ +L E V
Sbjct: 481 QIDKVNIEIQQSELKYDLNRAAELKYGTLTQLQKQLQEAETQLTATQTTGQTLLREEVTE 540
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++E ++L IG EAV AVA+++ RSRAGL
Sbjct: 541 SDIAEIISKWTGIPISKLVESEMQKLLHLEDELHKRVIGQDEAVTAVADAIQRSRAGLAD 600
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 601 PNRPVASFIFLGPTGVGKTELAKALASYLFDTEEAIVRIDMSEYMEKHAVSRLIGAPPGY 660
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD QG TVDF+N+V
Sbjct: 661 VGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNIMLQILDDGRVTDAQGHTVDFKNSV 720
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L M R +V++ +R FRPE LNR+DE+++F LS +LR
Sbjct: 721 IIMTSNVGSQYILDVAGDNEEM---RSRVMEAMRGTFRPEFLNRIDEMIIFHGLSKAELR 777
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ LQ+K + RLA+R ++L ++++A+D + YDP+YGARP++R +++++ T++++
Sbjct: 778 QIVLLQVKRLEKRLADRKMSLKLSESAIDFLAEIGYDPVYGARPLKRGIQRELETQMAKG 837
Query: 824 LVREEIDENSTVYID 838
++R + + T+++D
Sbjct: 838 ILRGDFADGDTIFVD 852
>gi|357635746|ref|ZP_09133624.1| ATP-dependent chaperone ClpB [Desulfovibrio sp. FW1012B]
gi|357584300|gb|EHJ49633.1| ATP-dependent chaperone ClpB [Desulfovibrio sp. FW1012B]
Length = 866
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/861 (53%), Positives = 619/861 (71%), Gaps = 27/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ +AI A +A G Q HL ALL+ G+ + + AG
Sbjct: 1 MDLNKFTQKSQQAIGEAQAVAVRMGQQQVDAEHLLYALLTQEQGLVPRILEKAGYAPDTY 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
AE +A+ KLP + +P ++ + L +++ +AQ K D +++V+ L L
Sbjct: 61 LAE--LERALGKLPRVSGPGSSPGQVYVTPRLNEMLVKAQDLAKHLKDEYVSVEHLFLAF 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
++ + G + K G+ RV + + ++RG G++V SA + T++AL YGRDLV+
Sbjct: 119 CDEPPSTMAGQINKALGIDKNRVLAALSEIRG--GQRVTSADPEGTYEALAKYGRDLVDA 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRDEEIRRV+RILSRRTKNNPV+IGE GVGKTA+VEGLA RIV DVP
Sbjct: 177 AKKGKLDPVIGRDEEIRRVIRILSRRTKNNPVIIGEAGVGKTAIVEGLAMRIVNRDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG+++LFIDE+H ++GAG+TEG
Sbjct: 237 LKDKTIFALDMGALIAGAKYRGEFEERLKAVLKEVQSSEGRILLFIDELHTIVGAGKTEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V+V EP+V DT+SILR
Sbjct: 297 SMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVFVDEPTVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGVRI D A+V AA LSARYI R LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLRERFEVHHGVRISDSAIVEAAVLSARYIADRQLPDKAIDLIDEAAALIRTEIDSLPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK MQLEIE AL++E DKAS+ RL ++ +EL +L+++ + ++++EK +D
Sbjct: 417 LDQINRKVMQLEIEREALKRETDKASRERLEKLEEELANLKEEQGGYLAQWEREKGAVDV 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLE--GNQSDENLMLT 529
+RR+K+ E+ A++EAER YDL RAA+LRYG + +E + GQ E G + M+
Sbjct: 477 LRRIKEDIEKTRQAIEEAERNYDLNRAAELRYGRLSALEKELAGQEEAIGKAAGGARMIR 536
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSR 578
E VGPD +A V+SRWTGIPVTRL ++E+E R++G EAV AVA++VLR+R
Sbjct: 537 EEVGPDDVAMVISRWTGIPVTRLLESEREKLLRLGDLLHGRVVGQDEAVTAVADAVLRAR 596
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P++P GSF+FLGPTGVGKTEL K LA LFD E+ ++R+DMSEYME+H+V+RLIG
Sbjct: 597 AGLKDPRRPIGSFIFLGPTGVGKTELCKTLAAALFDTEDNMIRLDMSEYMERHTVARLIG 656
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGY+G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQ+LDDGRLTD GRTVD
Sbjct: 657 APPGYIGYDEGGQLTEAVRRKPYSVVLFDEIEKAHSDVFNTLLQILDDGRLTDSHGRTVD 716
Query: 699 FRNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NT+IIMTSNLGA+HLL G+ + + V+ +R HFRPE LNR+DEIV+F PL
Sbjct: 717 FKNTIIIMTSNLGAQHLLEGIDPSGAFLPGVTEAVMNTLRGHFRPEFLNRVDEIVLFKPL 776
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
Q+ + L + + RLA+R ++L ++DAA + +YDP++GARP+RR+L+ V
Sbjct: 777 LRGQIAAIVELMLGGLRARLADRKISLVLSDAAKAFIAETAYDPVFGARPLRRYLQAHVE 836
Query: 818 TELSRMLVREEIDENSTVYID 838
T L++ L+ ++ + TV +D
Sbjct: 837 TPLAKALIGGQVADGQTVTVD 857
>gi|383768114|ref|YP_005447097.1| chaperone ClpB [Phycisphaera mikurensis NBRC 102666]
gi|381388384|dbj|BAM05200.1| chaperone ClpB [Phycisphaera mikurensis NBRC 102666]
Length = 874
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/880 (51%), Positives = 631/880 (71%), Gaps = 35/880 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P K T K+ A+ A LA S GH HLA+AL+ P G+ + + A
Sbjct: 1 MDPAKLTEKSRAAVQAAQSLAVSRGHQPADAEHLALALVEQPDGLVPRLLEKMNRPPATV 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA----STTLIKVIRRAQAAQKAHGDTHLAVDQLILG 116
+ E + + PS + P PA S + + +AQA+ A GD ++V+ L+LG
Sbjct: 61 AGE--LKRMLDAKPSVS-GPGSNPANAGVSQAFAQALEKAQASATAMGDEFVSVEHLVLG 117
Query: 117 LLE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE 173
LL+ + + ++ G+ +S V++LRG + KV + + + T++AL YG+DLVE
Sbjct: 118 LLDLPAGNPVRSALRDLGIDETAWRSVVKELRGNQ--KVTTDNPEATYEALAKYGQDLVE 175
Query: 174 QA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPS 231
A GKLDPVIGRDEEIRR +RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP
Sbjct: 176 LAKTGKLDPVIGRDEEIRRTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPD 235
Query: 232 NLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTE 291
+L D + +LDMGAL+AGAKYRGEFEERLKAVL EV+ AEG+++LFIDE+H ++GAG+++
Sbjct: 236 DLRDKTVFSLDMGALIAGAKYRGEFEERLKAVLNEVKGAEGRILLFIDELHTIVGAGKSD 295
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
G+MDA NL KPMLARG+L CIGATTL EYR+++EKDAA ERRFQ V V +P+V DT+SIL
Sbjct: 296 GAMDAGNLLKPMLARGELHCIGATTLNEYRQHIEKDAALERRFQPVLVDQPTVEDTISIL 355
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RG++E++E HGVRI D A+V AA LS RYI+ R LPDKAIDLVDEAC+ ++ +++S P
Sbjct: 356 RGIRERFEVFHGVRITDNAMVNAAVLSHRYISDRFLPDKAIDLVDEACSMIKTEMNSMPA 415
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
E+D L R+ MQLEIE AL+KE D S+ARL +R+EL +L+++ + +++ E+ +
Sbjct: 416 ELDGLTRRVMQLEIEEAALKKEDDDGSRARLDALREELANLKEQAGAMRGQWEAERGAVT 475
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD-------- 523
E+R L+++ E +++AE YDL +AA+L+YG + E+E + + + ++
Sbjct: 476 EVRGLREEIERAKLEIEQAENAYDLQKAAELKYGKLPELERKLAEQQTTEAQADDAARDG 535
Query: 524 ENLMLTETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAE 572
E + +TV ++IA++V++WTGIPV RL G+ EK ER+IG EAV VA+
Sbjct: 536 EPALFRDTVTDEEIAQIVAKWTGIPVARLVEGEREKLLKLDEVLHERVIGQDEAVTRVAD 595
Query: 573 SVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHS 632
+VLR+RAG+ P +P GSF+FLGPTGVGKTEL+KALAE LFD E+ LVRIDMSEYME+H+
Sbjct: 596 AVLRARAGIKDPDRPIGSFIFLGPTGVGKTELSKALAEALFDSEDNLVRIDMSEYMEKHA 655
Query: 633 VSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDG 692
VSRLIGAPPGY+G++EGGQLTEAVRR+PY V+LFDE+EKAH VFN LLQ+LDDGRLTD
Sbjct: 656 VSRLIGAPPGYIGYDEGGQLTEAVRRKPYCVILFDEIEKAHPDVFNVLLQLLDDGRLTDS 715
Query: 693 QGRTVDFRNTVIIMTSNLGAEHLL-SGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEI 751
QGRTV+F+NTV+IMTSN+G+ HLL + G + +R+ V+ ++R HFRPE LNR+D+I
Sbjct: 716 QGRTVNFKNTVVIMTSNIGSRHLLDDAVTGGGLGEGSRNAVMSDLRAHFRPEFLNRVDDI 775
Query: 752 VVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRW 811
V+F+PL+ +++ ++ RL + D+ RLA+R + L +TD A + V +DP+YGARP++R+
Sbjct: 776 VLFEPLATQEVAQIVRLLVADLQARLADRRIGLDLTDEAAEHVAVNGHDPVYGARPLKRY 835
Query: 812 LEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
L++++ T+L R L+ E++E TV +DA P D LV R +
Sbjct: 836 LQRELETKLGRKLIAGEVNEGDTVVVDADPD-DGLVIRAR 874
>gi|160881937|ref|YP_001560905.1| ATP-dependent chaperone ClpB [Clostridium phytofermentans ISDg]
gi|160430603|gb|ABX44166.1| ATP-dependent chaperone ClpB [Clostridium phytofermentans ISDg]
Length = 861
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/871 (52%), Positives = 618/871 (70%), Gaps = 31/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ +A+ +LA GH Q H LL D G+ +
Sbjct: 1 MNISKFTQKSLKAVQDCEKLAYEYGHQQIDEEHFLYCLLKDKEGLLPKLFQKMDINT--- 57
Query: 61 SAERVFNQAMKKLPSQTP--APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
VF ++ L ++ P + E+ S L KV+ A+ A GD +++V+ L L LL
Sbjct: 58 ---EVFLAQLQGLLNKRPKVSGGEVYISNDLNKVLIYAENEASAMGDQYVSVEHLFLSLL 114
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ + +I L K+ + R S + +RG + +V S + + T+ L+ YG DLVE+A
Sbjct: 115 KYPNIEIARLLKDFNINKDRFLSALASVRGNQ--QVRSDNPEATYDTLEKYGVDLVERAK 172
Query: 177 --KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
KLDPVIGRD EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L
Sbjct: 173 NQKLDPVIGRDSEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLK 232
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D RL ALDMGALVAGAKYRGEFEERLKAVL +V+ ++G++ILFIDE+H ++GAG+T+G+M
Sbjct: 233 DKRLFALDMGALVAGAKYRGEFEERLKAVLDDVKNSDGQIILFIDELHTIVGAGKTDGAM 292
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL EYR Y+EKDAA ERRFQ V V EP+V DT+SILRGL
Sbjct: 293 DAGNMLKPMLARGELHCIGATTLNEYRMYIEKDAALERRFQPVMVEEPTVEDTISILRGL 352
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 353 KERYEVFHGVKITDAALVSAAVLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELD 412
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
++ R+ MQ+EIE AL+KE D+ SK RL+ ++KEL +LR+ ++ EK +++++
Sbjct: 413 DISRRIMQMEIEEAALKKEDDRLSKERLLSLQKELAELREDFNERKAKWDNEKAAVEKVQ 472
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG-QLEGNQSDENLMLTETVG 533
+L+++ E + +Q AE YDL +AA+L+YG + + + + E + + + ++ E+V
Sbjct: 473 KLREELEAINNEIQNAELNYDLNKAAELKYGRLPSLRKQLELEEEKVKQEAHTLVHESVS 532
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
++IA VVSRWTGIPV +L ++E+ R+IG E V VA+++LRS+AG+
Sbjct: 533 EEEIARVVSRWTGIPVAKLTESERNKTLHLDEELHRRVIGQEEGVRRVADALLRSKAGIK 592
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAKALAE LFD+E +VRIDMSEYME++SVSRLIGAPPG
Sbjct: 593 DPSKPIGSFLFLGPTGVGKTELAKALAESLFDNEQNIVRIDMSEYMEKYSVSRLIGAPPG 652
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD GRTVDF+NT
Sbjct: 653 YVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRITDSTGRTVDFKNT 712
Query: 703 VIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
++IMTSN+G+ +LL G+ G+++ Q A V++++R HFRPE LNRLDEI++F PL+ E
Sbjct: 713 ILIMTSNIGSTYLLDGIDETGEISTQ-AESLVMEDLRAHFRPEFLNRLDEIILFKPLNKE 771
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+R + L + ++ RL +R + + +TD A +V+ ++YDP+YGARP++R+L+K V T
Sbjct: 772 DIRSIVDLLITNLNKRLEDRSIRVELTDTAKQLVIDKAYDPVYGARPLKRYLQKNVETLS 831
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+R+++ +++ E T+ ID +GD L RV+
Sbjct: 832 ARLILSDQVKEGDTILIDT--EGDKLTARVK 860
>gi|167389730|ref|XP_001739061.1| chaperone protein ClpB [Entamoeba dispar SAW760]
gi|165897378|gb|EDR24555.1| chaperone protein ClpB, putative [Entamoeba dispar SAW760]
Length = 844
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/853 (53%), Positives = 617/853 (72%), Gaps = 37/853 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+K+T T + + E+A +A P+H+ A++ + S I + + GG+
Sbjct: 1 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGD--VN 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
++ + M K+P Q P P +I T +V+RRA QK GD++LA+D +++ L+E+
Sbjct: 59 KLKKEIKETMNKIPVQNPPPVDIGLHPTTQQVLRRAIEKQKRMGDSYLAIDVIVMSLMEE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+I + +G+ V ++ ++R +G+ VE+ ++ ++ALK YG DL QA GK+
Sbjct: 119 KEISTIVGNSGINVKEFNKKITEMR--KGQSVETKEAESQYEALKKYGNDLTAQAESGKM 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DP+IGRDEEI+RV+RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVPSNL R+
Sbjct: 177 DPIIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNL-QCRV 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAA 297
I LDMGAL+AGA+YRG+FEERLKAV+KEV+E++ +ILFIDEIH VLGAG T EG+MDAA
Sbjct: 236 IGLDMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAA 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPML+RG+LRCIGATTLEEYRKYVEKD AFERRFQQVYV EPS +T+ ILRG++EK
Sbjct: 296 NILKPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVKEPSEENTLYILRGIREK 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE H+G+ I D ALV AA LS RYI GR LPDKAIDLVDEACA + Q +SQPEEID LE
Sbjct: 356 YENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDKLE 415
Query: 418 RKRMQLEIELHALE---KEKD----KASKARLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
R+ QL +E ALE KE D K K RL E+ KEL + ++KL L + Y+KEK
Sbjct: 416 RRETQLNVEKIALERDIKESDEDHNKMIKERLQEIEKELSENKEKLTKLRINYEKEKGGS 475
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTE 530
+E++ L K E + +AE DL AADL+Y I E E + +L+G + E M++
Sbjct: 476 EEMKELATKIEAMK---HKAESTKDLEVAADLKYYGIPEAEKRMKELKGT-NKETTMISL 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLAEAVNAVAESVLRSRAGLGRPQQPTGS 590
V P QI EVV + +R+IG EAV AV+++++RSR GLG ++PTGS
Sbjct: 532 QVTPTQIEEVVK-----------EELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKRPTGS 580
Query: 591 FLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGG 650
F+FLGP+GVGKTELAKALA +LFDDE +VRIDMSEYME HSVSRLIGAPPGYVG+EEGG
Sbjct: 581 FMFLGPSGVGKTELAKALAVELFDDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGG 640
Query: 651 QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL 710
QLTEA+RR+PYSV+LFDE+EKAH VFN LLQ+LD+GRLTDG+GRTVDF+NT++IMTSNL
Sbjct: 641 QLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNL 700
Query: 711 GAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
G+E ++ G+ G+V+ +V ++ V++ V+K F+PE LNRLD+I+VF PLS ++L+++ +L
Sbjct: 701 GSEIIMKGVEREGQVSRKV-KETVMEIVKKTFKPEFLNRLDDIIVFSPLSEKELKEIVKL 759
Query: 769 QMKDVAIRLAERGVALA---VTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
QM +V I++ ++ L+ +T++A++ ++ Y YGARP+RR++EK VVT +++ ++
Sbjct: 760 QMGEV-IKMIKKRYPLSEVEMTESAIEGIIKSGYSIAYGARPMRRYIEKTVVTSITKSII 818
Query: 826 REEIDENSTVYID 838
+ E + + ID
Sbjct: 819 SGIMKEKNKIQID 831
>gi|428221827|ref|YP_007105997.1| ATP-dependent chaperone ClpB [Synechococcus sp. PCC 7502]
gi|427995167|gb|AFY73862.1| ATP-dependent chaperone ClpB [Synechococcus sp. PCC 7502]
Length = 869
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/862 (51%), Positives = 624/862 (72%), Gaps = 31/862 (3%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSD---PSGIFAQAINNAGG 55
M P ++FT K EAI E++ +A Q HL +LL + + IF +A N
Sbjct: 1 MQPTQNQFTEKAWEAIVRTPEMSKAAQQQQIESEHLMKSLLEEEGLATSIFNKA--NVSV 58
Query: 56 ENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
E E N+ K S + + TL+ RA+ A+K+ D ++++ L+L
Sbjct: 59 EKLRDRTEEFINRQPKVTGSNAASGYLGRSMDTLLD---RAELARKSFNDDFISIEHLVL 115
Query: 116 GLLEDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
+D + G L +E + A+++ +E++RG + KV + + ++AL YGRDL E
Sbjct: 116 AFAKDDRFGKTLLQEFSLDEAKLRKIIEQIRGNQ--KVTDQTPENKYEALTKYGRDLTEW 173
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +
Sbjct: 174 ARQGKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRILSGDVPES 233
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D +LIALDMGAL+AGAKYRGEFEERLKAVLKEV E++G+++LFIDEIH V+GAG T+G
Sbjct: 234 LRDRKLIALDMGALIAGAKYRGEFEERLKAVLKEVMESQGRIVLFIDEIHTVVGAGATQG 293
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA+NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQV+V +PSV DTVSILR
Sbjct: 294 AMDASNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVFVDQPSVEDTVSILR 353
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE+YE HHGVRI D AL+ AA LS RYI+ R LPDKAIDL+DEA A +++++ S+PEE
Sbjct: 354 GLKERYELHHGVRIADNALIAAATLSTRYISDRFLPDKAIDLMDEAAAKLKMEITSKPEE 413
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D ++RK +QLE+E +L+KE D SK R+ ++ KEL +L+ + L +++ EK+ ID
Sbjct: 414 LDEIDRKILQLEMERLSLKKETDADSKERVEKLVKELAELKSEQVTLTAKWQSEKQIIDN 473
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL-----M 527
+RR K++ E + +Q+AER YDL +AA L+YG + +++ + + E ++ + M
Sbjct: 474 VRRCKEEIERVNLEIQQAERDYDLEKAAKLKYGKLTDLQRELQKAEERINETHTVSSRPM 533
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLR 576
L E V + IAE++S+WTGIPV +L ++EK ER+IG ++AV AV++++ R
Sbjct: 534 LREEVTEEDIAEIISKWTGIPVLKLVESEKAKLLYLEDELHERVIGQSQAVTAVSDAIQR 593
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
SRAGL P +P SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+HSVSRL
Sbjct: 594 SRAGLSDPNRPIASFIFLGPTGVGKTELAKALANYLFDTEEAMVRIDMSEYMEKHSVSRL 653
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
+GAPPGYVG++EGGQLTEA+RRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QGRT
Sbjct: 654 VGAPPGYVGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGRT 713
Query: 697 VDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
VDF+N +IIMTSN+G++++L ++ RD+V++ +R FRPE LNR+DEI++F
Sbjct: 714 VDFKNAIIIMTSNIGSQYILDIGGDDSKYEIMRDRVMESMRSSFRPEFLNRIDEIIIFHS 773
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L E+LR++ +LQ++ + RL+ER ++L ++++ALD V YDP+YGARP++R +++++
Sbjct: 774 LRREELRQIVKLQVQRLEQRLSERKMSLHLSESALDFVAEVGYDPVYGARPLKRVIQRQL 833
Query: 817 VTELSRMLVREEIDENSTVYID 838
T++++ ++R + + +++D
Sbjct: 834 ETQIAKSILRGDFIDGDHIFVD 855
>gi|29833783|ref|NP_828417.1| ATP-dependent Clp protease [Streptomyces avermitilis MA-4680]
gi|54035822|sp|Q826F2.1|CLPB2_STRAW RecName: Full=Chaperone protein ClpB 2
gi|29610907|dbj|BAC74952.1| putative ATP-dependent Clp protease [Streptomyces avermitilis
MA-4680]
Length = 879
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/863 (53%), Positives = 613/863 (71%), Gaps = 29/863 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T K+ EA+ A A GH + HL +ALL G+ + + AG E
Sbjct: 1 MDMNRLTQKSQEALQEAQTAAGRMGHTEVDGEHLLLALLDQEDGLIPRLLQQAGTEPKEL 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
A + + P T AP ++ + L +++ A+ K D +++V+ L+L L
Sbjct: 61 RA--AVREELSHRPKATGPGAAPGQVFVTQRLARLLDAAEREAKRLKDEYVSVEHLLLAL 118
Query: 118 LEDSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+S G L K+AG+ S + ++RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 119 AEESSSTAAGLLLKQAGITRDSFLSALTQVRGNQ--RVTSANPEVAYEALEKYGRDLVLE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A G+LDPVIGRD EIRRV +ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP
Sbjct: 177 ARSGRLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMG+LVAGAKYRGEFEERLKAVL EV+ AEG+++LF+DE+H V+GAG EG
Sbjct: 237 LRDKTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAEGRILLFVDELHTVVGAGAAEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L IGATTL+EYRK++EKDAA ERRFQQV V EPSV DT+SILR
Sbjct: 297 AMDAGNMLKPMLARGELHMIGATTLDEYRKHIEKDAALERRFQQVLVDEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E+ E HGV+IQD ALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 357 GLRERLEVFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ +LEIE AL KE D ASK RL E+R+EL DLR + +++ E++ I
Sbjct: 417 LDEITRRVTRLEIEEAALSKESDPASKTRLEELRRELADLRGEADAKHAQWEAERQAIRR 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLML 528
++ L+Q+ E++ +EAER YDL RAA+LRYG +Q++E + QL Q EN +L
Sbjct: 477 VQELRQELEQVRHEAEEAERAYDLNRAAELRYGRLQDLERRLAAEEEQLAAKQG-ENRLL 535
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRS 577
E V ++IAE+V+ WTGIPV RL + E +ER+IG EAV V ++++R+
Sbjct: 536 REVVTEEEIAEIVAAWTGIPVARLQEGEREKLLRLDEILRERVIGQDEAVKLVTDAIIRA 595
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E +VR+DMSEY E+H+VSRL+
Sbjct: 596 RSGIRDPRRPIGSFIFLGPTGVGKTELAKTLARTLFDSEENMVRLDMSEYQERHTVSRLM 655
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQ+LDDGR+TD QGRTV
Sbjct: 656 GAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRTV 715
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
DFRNTVIIMTSN+G+EHLL G + ++ AR V+ E+R HFRPE LNR+D+IV+F P
Sbjct: 716 DFRNTVIIMTSNIGSEHLLDGATAEGEIKPDARALVMGELRGHFRPEFLNRVDDIVLFKP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L Q+ ++ LQ ++ RLAER + + +TDA +++ + YDP+YGARP+RR++ +V
Sbjct: 776 LGERQIERIVELQFDELRQRLAERRITVELTDAGREVIAHQGYDPVYGARPLRRYISHEV 835
Query: 817 VTELSRMLVREEIDENSTVYIDA 839
T + R L+R ++ + +TV +DA
Sbjct: 836 ETLVGRALLRGDVQDGATVRVDA 858
>gi|376004657|ref|ZP_09782304.1| protein disaggregation chaperone [Arthrospira sp. PCC 8005]
gi|375327005|emb|CCE18057.1| protein disaggregation chaperone [Arthrospira sp. PCC 8005]
Length = 872
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/855 (51%), Positives = 621/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
+P KFT K +A+A ++ A Q HL ALL A ++ N G + A+
Sbjct: 5 DPSKFTEKAWQALAQTPDIVKQAQQQQIETEHLMKALLEQDG--LANSLFNKAGISVAKV 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
E N + + P + TL ++ A+A ++ +GD +++V+ L+L +D+
Sbjct: 63 RESTEN-FINRQPKIKGNSTNVYLGRTLDTLLDNAEAYRQQYGDEYISVEHLLLAYTKDA 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G L++E + A+++ + ++RG + ++ G ++AL+ YGRDL E A GKL
Sbjct: 122 RFGKTLYQEFRLDEAKLQQIITQIRGNQTVTDQNPEG--KYEALEKYGRDLTEAARMGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L + +L
Sbjct: 180 DPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGDVPQSLQERKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMG+L+AGAK+RGEFEERLKAVLKEV ++EGK+ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGSLIAGAKFRGEFEERLKAVLKEVTDSEGKIILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D +LV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKISDSSLVAAATLSTRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + K+L +L+++ + L +++ EK I I+ LK+
Sbjct: 420 KILQLEMEKLSLQKESDTASQERLERLEKDLANLKEEQRTLSAQWESEKNTITHIQSLKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQ----EVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG ++ ++ A QL+ Q+ +L E V
Sbjct: 480 EIDRVNIEIQQAERNYDLNRAAELKYGTLEALKKQLHQAESQLQDTQTGGKTLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L +G EAV AVA+S+ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEKEKLLHLEDELHQRVVGQDEAVTAVADSIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E +VR+DMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PNRPVASFIFLGPTGVGKTELAKALASYLFDTEEAIVRVDMSEYMEKHSVSRLLGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDAQGRTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + R +V+ +R FRPE LNR+DEI++F L QLR
Sbjct: 720 IIMTSNIGSQYILDIAGDDSRYEEMRHRVMDSMRSAFRPEFLNRIDEIIIFHSLKPHQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ LQ+ +++ RL + ++L ++++ALD + +DP+YGARP++R +++++ T++++
Sbjct: 780 EIVLLQLGNLSQRLEQHKMSLKLSESALDYLADVGFDPVYGARPLKRAIQQELETQIAKG 839
Query: 824 LVREEIDENSTVYID 838
++R E ++ +T+Y+D
Sbjct: 840 ILRGEFNDGNTIYVD 854
>gi|209525054|ref|ZP_03273598.1| ATP-dependent chaperone ClpB [Arthrospira maxima CS-328]
gi|209494463|gb|EDZ94774.1| ATP-dependent chaperone ClpB [Arthrospira maxima CS-328]
Length = 872
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/855 (51%), Positives = 621/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
+P KFT K +A+A ++ A Q HL ALL A ++ N G + A+
Sbjct: 5 DPSKFTEKAWQALAQTPDIVKQAQQQQIETEHLMKALLEQDG--LANSLFNKAGISVAKV 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
E N + + P + TL ++ A+A ++ +GD +++V+ L+L +D+
Sbjct: 63 RESTEN-FINRQPKIKGNSTNVYLGRTLDTLLDNAEAYRQQYGDEYISVEHLLLAYTKDA 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G L++E + A+++ + ++RG + V + + ++AL+ YGRDL E A GKL
Sbjct: 122 RFGKTLYQEFRLDEAKLQQIITQIRGNQ--TVTDQNPEGKYEALEKYGRDLTEAARMGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L + +L
Sbjct: 180 DPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGDVPQSLQERKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMG+L+AGAK+RGEFEERLKAVLKEV ++EGK+ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGSLIAGAKFRGEFEERLKAVLKEVTDSEGKIILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D +LV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKISDSSLVAAATLSTRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + K+L +L+++ + L +++ EK I I+ LK+
Sbjct: 420 KILQLEMEKLSLQKESDTASQERLERLEKDLANLKEEQRTLSAQWESEKNTITHIQSLKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQ----EVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG ++ ++ A QL+ Q+ +L E V
Sbjct: 480 EIDRVNIEIQQAERNYDLNRAAELKYGTLEALKKQLHQAESQLQDTQTGGKTLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L +G EAV AVA+S+ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEKEKLLHLEDELHQRVVGQDEAVTAVADSIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E +VR+DMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PNRPVASFIFLGPTGVGKTELAKALASYLFDTEEAIVRVDMSEYMEKHSVSRLLGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDAQGRTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + R +V+ +R FRPE LNR+DEI++F L QLR
Sbjct: 720 IIMTSNIGSQYILDIAGDDSRYEEMRHRVMDSMRSAFRPEFLNRIDEIIIFHSLKPHQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ LQ+ +++ RL + ++L ++++ALD + +DP+YGARP++R +++++ T++++
Sbjct: 780 EIVLLQLGNLSQRLEQHKMSLKLSESALDYLADVGFDPVYGARPLKRAIQRELETQIAKG 839
Query: 824 LVREEIDENSTVYID 838
++R E ++ +T+Y+D
Sbjct: 840 ILRGEFNDGNTIYVD 854
>gi|411120315|ref|ZP_11392691.1| ATP-dependent chaperone ClpB [Oscillatoriales cyanobacterium
JSC-12]
gi|410710471|gb|EKQ67982.1| ATP-dependent chaperone ClpB [Oscillatoriales cyanobacterium
JSC-12]
Length = 873
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/866 (51%), Positives = 628/866 (72%), Gaps = 24/866 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K +AIA A ++A A + Q HL ALL A ++ N Q
Sbjct: 5 NPNQFTEKAYQAIAQAADIAKQAQNQQIESEHLMKALLEQDG--LASSVFKKLNVNIQQL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R ++ ++K P + A + +L ++ RA++ +K +GD ++V+ ++LG +D
Sbjct: 63 RDRT-DEFIRKQPKVSGAGSNVYLGRSLDTLLDRAESYRKQYGDEFISVEHMLLGFAKDD 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF E + ++KS ++++RG + KV + + +++L+ YGRDL + A GKL
Sbjct: 122 RFGKALFNEFRLDENKLKSAIDQIRGSQ--KVTDQNPEGKYESLEKYGRDLTQFARDGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVTGDVPESLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFEERLKAVLKEV E++G +ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKYRGEFEERLKAVLKEVTESQGTIILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGL+E+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLRERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADSALVAAAMLSTRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL ++ KEL DL+++ L +++ EKE+I +I+ LK+
Sbjct: 420 KILQLEMEKLSLQKETDAASRDRLEKLEKELADLKEEQSTLNAQWQAEKEKITKIQSLKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ E + +Q+AER YDL RAA+L+YG + ++++ A L Q+ +L E V
Sbjct: 480 EIEAVNLEIQQAERDYDLNRAAELKYGKLTNLNRQLQEAEKLLAEAQTSGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++E ++L IG EAV AVA+++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEMQKLLHLEDELHKRVIGQNEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPVASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QG TVDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++ +L +V R +V+ +R FRPE LNR+DE ++F L +LR
Sbjct: 720 IIMTSNIGSQFILDVAGDDTQYEVMRSRVIDAMRAQFRPEFLNRVDEFIIFHGLQKSELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ + + RL +R ++L ++DAA+D + YDP+YGARP++R +++++ T++++
Sbjct: 780 NIVKLQTQRLEQRLGDRKMSLKLSDAAIDFLADVGYDPVYGARPLKRAIQRELETQIAKS 839
Query: 824 LVREEIDENSTVYIDASPKGDNLVYR 849
++R E + T+++D + + LV++
Sbjct: 840 ILRGEFQDGDTIFVDVG-ENERLVFK 864
>gi|16331048|ref|NP_441776.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|383322790|ref|YP_005383643.1| ClpB protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383325959|ref|YP_005386812.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383491843|ref|YP_005409519.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384437111|ref|YP_005651835.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|451815205|ref|YP_007451657.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|2493734|sp|P74361.1|CLPB2_SYNY3 RecName: Full=Chaperone protein ClpB 2
gi|1653543|dbj|BAA18456.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|339274143|dbj|BAK50630.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|359272109|dbj|BAL29628.1| ClpB protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275279|dbj|BAL32797.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278449|dbj|BAL35966.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407961585|dbj|BAM54825.1| ClpB protein [Bacillus subtilis BEST7613]
gi|451781174|gb|AGF52143.1| ClpB protein [Synechocystis sp. PCC 6803]
Length = 872
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/857 (52%), Positives = 623/857 (72%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
+P+KFT K EAIA E+A Q HL ALL + +G+ A +I N G + +
Sbjct: 5 DPNKFTEKAWEAIAKTPEIAKQHRQQQIETEHLLSALL-EQNGL-ATSIFNKAGASIPRV 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
++V N + + P + + I +L K++ A+ A+ +GD +++++ L+ +D
Sbjct: 63 NDQV-NSFIAQQPKLSNPSESIYLGRSLDKLLDNAEIAKSKYGDDYISIEHLMAAYGQDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
++G +L++E G+ ++ ++++RG + KV + + +++L+ YGRDL E A GKL
Sbjct: 122 RLGKNLYREIGLTENKLAEIIKQIRGTQ--KVTDQNPEGKYESLEKYGRDLTELAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEE+RR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ DVP +L D +L
Sbjct: 180 DPVIGRDEEVRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINHDVPESLRDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAKYRGEFEERLKAVLKEV +++G++ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDMGALIAGAKYRGEFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGALRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVLDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADSALVAAAMLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L++E D ASK RL ++ KEL D +++ L +++ EK ID+IR +K+
Sbjct: 420 KILQLEMERLSLQRENDSASKERLEKLEKELADFKEEQSKLNGQWQSEKTVIDQIRTVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+++ +Q+A+R YD +AA+L+YG + ++VEA QL Q+ +L E V
Sbjct: 480 TIDQVNLEIQQAQRDYDYNKAAELQYGKLTDLQRQVEALETQLAEQQTSGKSLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L IG EAV AVAE++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEKEKLLHLEDELHSRVIGQDEAVTAVAEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA+ LFD E LVRIDMSEYME+H+VSRL+GAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEYMEKHAVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNVMLQILDDGRLTDAQGHVVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSNLG++++L + R +V+ +R++FRPE LNR+DE ++F L +LR
Sbjct: 720 IIMTSNLGSQYILDVAGDDSRYEEMRSRVMDVMRENFRPEFLNRVDETIIFHGLQKSELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ ++Q++ +A RL E+ + L +TD ALD + A YDP+YGARP++R ++K + T +++
Sbjct: 780 SIVQIQIQSLATRLEEQKLTLKLTDKALDFLAAVGYDPVYGARPLKRAVQKYLETAIAKG 839
Query: 824 LVREEIDENSTVYIDAS 840
++R + T+ +D +
Sbjct: 840 ILRGDYKPGETIVVDET 856
>gi|409990893|ref|ZP_11274211.1| ATPase [Arthrospira platensis str. Paraca]
gi|291570318|dbj|BAI92590.1| ClpB protein [Arthrospira platensis NIES-39]
gi|409938252|gb|EKN79598.1| ATPase [Arthrospira platensis str. Paraca]
Length = 872
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/855 (51%), Positives = 621/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
+P KFT K +A+A ++ A Q HL ALL A ++ N G + A+
Sbjct: 5 DPSKFTEKAWQALAQTPDIVKQAQQQQIETEHLMKALLEQDG--LANSLFNKAGISVAKV 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
E N + + P + TL ++ A+A ++ +GD +++V+ L+L +D+
Sbjct: 63 RESTEN-FINRQPKIKGNSTNVYLGRTLDTLLDNAEAYRQQYGDEYISVEHLLLAYAKDA 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G L++E + A+++ + ++RG + ++ G ++AL+ YGRDL E A GKL
Sbjct: 122 RFGKTLYQEFRLDEAKLQQIITQIRGNQTVTDQNPEG--KYEALEKYGRDLTEAARMGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L + +L
Sbjct: 180 DPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGDVPQSLQERKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKEV ++EGK+ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEVTDSEGKIILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D +LV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKISDSSLVAAATLSTRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + K+L +L+++ + L +++ EK I I+ LK+
Sbjct: 420 KILQLEMERLSLQKESDTASQERLERLEKDLANLKEEQRTLSAQWESEKNTITHIQSLKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQ----EVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG ++ ++ A QL+ Q+ +L E V
Sbjct: 480 EIDRVNIEIQQAERNYDLNRAAELKYGTMEALKKQLHQAESQLQDTQTGGKTLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L +G EAV AVA+S+ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEKEKLLHLEDELHQRVVGQDEAVTAVADSIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PNRPVASFIFLGPTGVGKTELAKALASYLFDTEEAIVRIDMSEYMEKHSVSRLLGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+++GGQLTEA+RRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF+NT+
Sbjct: 660 VGYDDGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDSQGRTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + R +V+ +R FRPE LNR+DEI++F L QLR
Sbjct: 720 IIMTSNIGSQYILDIAGDDSRYEEMRHRVMDSMRSAFRPEFLNRIDEIIIFHSLKPHQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ LQ+ +++ RL + ++L ++++ALD + +DP+YGARP++R +++++ T++++
Sbjct: 780 EIVLLQLGNLSQRLEQHKMSLKLSESALDYLADVGFDPVYGARPLKRAIQQELETQIAKG 839
Query: 824 LVREEIDENSTVYID 838
++R E ++ +T+Y+D
Sbjct: 840 ILRGEFNDGNTIYVD 854
>gi|119509203|ref|ZP_01628353.1| ATPase [Nodularia spumigena CCY9414]
gi|119466045|gb|EAW46932.1| ATPase [Nodularia spumigena CCY9414]
Length = 872
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/855 (51%), Positives = 621/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA ++A Q HL ALL A +I G + +
Sbjct: 5 NPNQFTEKAWEAIAHTPDIAKQYQQQQLESEHLMKALLEQDG--LANSILTKAGVDLQKI 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R Q ++ P + + + +L ++ +A ++ D +++++ L+L +D
Sbjct: 63 RDRT-EQFFQRQPKVSGSSTSVFLGRSLDTLLDKADVYRQDFKDEYISIEHLLLAYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E G+ ++K ++++RG + KV + + ++AL+ YGRDL E A G+L
Sbjct: 122 RFGKSLFQEFGLDEGKLKKIIKQIRGSQ--KVTDQNPEGKYEALEKYGRDLTEAARKGQL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR V+ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGDVPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAK+RGEFEERLKAVLKEV E+ G ++LFIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDMGALIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVTDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS+RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVRISDSALVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + KEL DL+++ + L +++ EK+ I++I+ +K+
Sbjct: 420 KILQLEMEKLSLQKETDAASRERLERIEKELADLKEEQRTLTAQWQSEKDIINKIQSIKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG + +++E A G+L Q +L E V
Sbjct: 480 EIDRVSLEVQQAERNYDLNRAAELKYGKLTNLHRQLETAEGELANVQRTGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WT IP+++L ++EKE+L IG AEAV AVA+++ RSRAGL
Sbjct: 540 ADIAEIISKWTRIPISKLVESEKEKLLHLEDELHNRVIGQAEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA +FD E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFIFLGPTGVGKTELAKALAAYMFDTEESLVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTE +RRRPY+V+LFDE+EKAH VFN LLQ+LDDGR+TD QGRTVDF+N +
Sbjct: 660 VGYEEGGQLTEVIRRRPYAVILFDEIEKAHADVFNILLQILDDGRVTDSQGRTVDFKNAI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L R +V++ +R FRPE LNR+DEI++F L ++LR
Sbjct: 720 IIMTSNIGSQYILDVAGEAEHYDEMRRRVMEAMRNSFRPEFLNRIDEIIIFHGLDKKELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ LQ++ + RL++R ++L ++D++LD + YDP+YGARP++R +++++ T++++
Sbjct: 780 QIVLLQVERLRERLSDRKMSLKLSDSSLDFLAEVGYDPVYGARPLKRAIQRELETQIAKA 839
Query: 824 LVREEIDENSTVYID 838
++R E + T+++D
Sbjct: 840 ILRGEFHDGDTIFVD 854
>gi|226947643|ref|YP_002802734.1| clpB protein [Clostridium botulinum A2 str. Kyoto]
gi|226841508|gb|ACO84174.1| clpB protein [Clostridium botulinum A2 str. Kyoto]
Length = 866
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/867 (51%), Positives = 618/867 (71%), Gaps = 25/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K T K +AI + +A H Q +HL AL+S G+ + G
Sbjct: 1 MNIEKLTLKVQQAINDSQLVAVKYNHQQIDTIHLFSALISQDDGLIPNILGKMGVNIRDI 60
Query: 61 SAE--RVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+AE RV + M K+ + + + +V +A+ K D++++V+ ++L ++
Sbjct: 61 NAETNRVLDN-MPKVLGEGAQSSSVYPTRRFEEVFVKAEQIAKDFKDSYISVEHVLLAIM 119
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ + + + ++ GV + + +RG ++V+S + T++AL YGR+LVE+A
Sbjct: 120 DVDRNTVFPILEKFGVKKSEFLKALSAVRG--SQRVDSQDPEGTYEALVKYGRNLVEEAK 177
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP +L
Sbjct: 178 KHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPESLK 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG++ILFIDEIH ++GAG+TEGSM
Sbjct: 238 NKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGRIILFIDEIHTIVGAGKTEGSM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V EP+V DTVSILRGL
Sbjct: 298 DAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVITDEPTVEDTVSILRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E +HG+RI D A+V AA+LS+RYIT R+LPDKAIDL+DEACA +R +DS P E+D
Sbjct: 358 KERFEIYHGIRIHDSAIVAAAKLSSRYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+++RK QLEIE AL KEKD ASK RL + KEL +L++K + + +Y+ EK I +IR
Sbjct: 418 SMKRKIFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIR 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTET 531
LK+K +++ +++AER YDL + A+L+YG I ++ I + E S+ N ML E
Sbjct: 478 DLKEKLDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEE 537
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V +I+E++S+WTGIPVTRL + E+++L IG EAV AV +V+R+RAG
Sbjct: 538 VTEQEISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME++SVSRLIGAP
Sbjct: 598 LKDPRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEENIIRIDMSEYMEKYSVSRLIGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+ +DF+
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKVIDFK 717
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSNLG+ +LL + + R +V + ++ F+PE LNR+D+I++F PL+ E
Sbjct: 718 NTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEALKARFKPEFLNRVDDIIMFKPLTVE 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++++ + + D+ RL ++ + L +TD+A DI+ E YDPIYGARP++R++E + TE+
Sbjct: 778 DIKRIIDIFLDDIRKRLKDKNIQLKITDSAKDIMAKEGYDPIYGARPLKRYIEDTIETEI 837
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLV 847
++ ++ I E +TV +D KG+++V
Sbjct: 838 AKQIIAGNIYEGTTVGVDL--KGESIV 862
>gi|182677816|ref|YP_001831962.1| ATP-dependent chaperone ClpB [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633699|gb|ACB94473.1| ATP-dependent chaperone ClpB [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 865
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/859 (53%), Positives = 607/859 (70%), Gaps = 23/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T +T I A LA H QFTP HL LL DP G+ A I+ AGG + +
Sbjct: 1 MNFEKYTDRTRGFIQSAQSLAQRENHQQFTPEHLLKVLLDDPEGLAAGLIDRAGGRS--R 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
A A+ KLP Q ++ + T ++ A+ + GD+ + V++L+L L
Sbjct: 59 DALTQTELALAKLPKVQGSGAGQVYLAPTTARIFENAEKIAQKAGDSFVTVERLLLALAM 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ ++ G + ++AGV + + +E+LR +GR +SA+ + + ALK Y RDL E A
Sbjct: 119 EKSAEAGKILEKAGVTPQSLGAAIEQLR--KGRTADSATAENAYDALKKYARDLTEAARS 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
G LDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 GALDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLRD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
RL+ALDMG+L+AGAKYRGEFEERLKA+L EV+ AEG +ILFIDE+H ++GAG+TEG+MD
Sbjct: 237 KRLLALDMGSLIAGAKYRGEFEERLKAILNEVQAAEGGIILFIDEMHTLVGAGKTEGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVTEPTVADTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+D
Sbjct: 357 EKYELHHGVRITDAAIVAAATLSNRYITDRFLPDKAIDLIDEAGSRLRMQVDSKPEELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE AL+KE D ASK RL+ + EL +L+++ L R+ EK+++ ++
Sbjct: 417 LDRRIIQLKIEQEALKKESDPASKDRLIRLESELAELQERSDALNTRWHAEKDKLGSEQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK++ E L +A+RR + RA +L YG I +E + + EG + D +++ E V D
Sbjct: 477 LKEQLEAARNELVQAQRRGEFQRAGELTYGIIPGLEQQLTEFEGKRGD--VLVEEAVTAD 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRP 584
+A+VVSRWTG+PV ++ + E+E R++G AEAV AV+ +V R+RAGL
Sbjct: 535 HVAQVVSRWTGVPVDKMLEGEREKLLHMEEFLAKRVVGQAEAVKAVSTAVRRARAGLQDA 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALA LFDDE+ L+RIDMSEYME+HSV+RLIGAPPGYV
Sbjct: 595 NRPIGSFMFLGPTGVGKTELTKALAGFLFDDESALLRIDMSEYMEKHSVARLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRN +I
Sbjct: 655 GYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVLI 714
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
+MTSNLGAE L+ G+ + V + +V+Q VR HFRPE LNR+DEI++F L E + +
Sbjct: 715 VMTSNLGAEFLVLQKEGEDSSAV-QTEVMQVVRNHFRPEFLNRIDEIILFHRLRREDMDQ 773
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L ER + L +T A + + YDP YGARP++R ++K V L+ +
Sbjct: 774 IVDIQFSRLGRLLEERKIQLDLTPEARTWLAEKGYDPAYGARPLKRVIQKNVQDPLAEQI 833
Query: 825 VREEIDENSTVYIDASPKG 843
+ I + TV I ASP G
Sbjct: 834 LAGTIHDGETVTIGASPNG 852
>gi|295090717|emb|CBK76824.1| ATP-dependent chaperone ClpB [Clostridium cf. saccharolyticum K10]
Length = 863
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/857 (52%), Positives = 620/857 (72%), Gaps = 27/857 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG-GENAA 59
MN +KFT K+ EA+ +LA G+ Q HL +LL+ + + I G EN
Sbjct: 1 MNINKFTQKSLEAVQRTEKLAYEYGNQQIDQEHLLYSLLTIDDSLILKLITKMGIQENQF 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ ++ A++KLP + ++ S KV+ A+ KA GD +++V+ L L +L+
Sbjct: 61 LNEVQL---AIEKLPKVSGG--QVYFSQDANKVLVNAEDEAKAMGDEYVSVEHLFLSMLK 115
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ + +LF+ + + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 116 QPNRAMKELFRLYNITREGFLQALSTVRGNQ--RVVSDNPEATYDTLNKYGYDLVERARD 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 174 QKLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLKD 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L ALDMGALVAGAKYRGEFEERLKAVL+EV+++EG++ILFIDE+H ++GAG+TEGSMD
Sbjct: 234 KKLFALDMGALVAGAKYRGEFEERLKAVLEEVKKSEGQIILFIDELHTIVGAGKTEGSMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V+V EP+V DT+SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVHVDEPTVEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
++YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 DRYEVYHGVKITDSALVSAAVLSDRYISDRFLPDKAIDLVDEACAMIKTELDSLPTELDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
R+ MQLEIE AL+KE D+ S+ RL +++KEL +LRD+ +++ EK +D + +
Sbjct: 414 KSRRIMQLEIEEAALKKETDRLSQDRLEDLQKELAELRDEFAAQKAQWENEKASVDRLSK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
L+++ E L +Q A+++YDL RAA+L+YG + E++ + + E + +L L E+V
Sbjct: 474 LREEIEHLNSEIQAAQQKYDLNRAAELQYGKLPELKKQLAEEEEKVKNADLSLVHESVTE 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA ++S+WTGIPV +L ++E+ +R+IG EAV V E+++RS+AG+
Sbjct: 534 EEIARIISKWTGIPVAKLTESERSKTLHMDDILHKRVIGQDEAVTKVTEAIIRSKAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAKALAE LFDDEN +VRIDMSEYME+HSVSRLIGAPPGY
Sbjct: 594 PTKPIGSFLFLGPTGVGKTELAKALAESLFDDENNMVRIDMSEYMEKHSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD G+TVDF+NT+
Sbjct: 654 VGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSTGKTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSN+G+++LL G+ G +T + A + + ++R HFRPE LNRLDEI++F PL+ +
Sbjct: 714 LIMTSNIGSQYLLEGIDENGNIT-EAADNMAMNDLRAHFRPEFLNRLDEIIMFKPLTKDN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L ++DV RLA+R +++++TD+A ++ YDP+YGARP++R+L+K V T +
Sbjct: 773 IGGIIELLVEDVNKRLADRELSISLTDSARQFIVENGYDPVYGARPLKRYLQKHVETLAA 832
Query: 822 RMLVREEIDENSTVYID 838
R+++ + + + ID
Sbjct: 833 RLILADGVRAGDVIQID 849
>gi|395334337|gb|EJF66713.1| hypothetical protein DICSQDRAFT_95405 [Dichomitus squalens LYAD-421
SS1]
Length = 893
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/866 (52%), Positives = 615/866 (71%), Gaps = 39/866 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSD---------PSGIFAQAIN 51
MN +FT KT E++A A +LA +AQ P H+A ALL++ S +F+ I+
Sbjct: 1 MNNMQFTDKTQESLAAAIQLAKDYANAQVHPAHIAFALLNEGQSEGGGPSTSSLFSSVID 60
Query: 52 NAGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVD 111
AGG+ + R + + +LP+Q+P P+E+ S+ KVIR A + +K D+++A D
Sbjct: 61 KAGGDTV--TIRRALQKLIVRLPTQSPPPEEVSLSSAAAKVIREADSLRKTMHDSYIAQD 118
Query: 112 QLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL 171
++ L++DS I + KEAG+ VK+ ++++RG R+V+S + + F AL Y DL
Sbjct: 119 HILAALIKDSSIAPILKEAGLTEDVVKTAIDQIRGN--RRVDSKNAEQGFDALNKYATDL 176
Query: 172 VEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDV 229
A GKLDPVIGRD EIRRVVRIL RRTKNNP+LIGEPGVGK+A+ EGLAQRIV DV
Sbjct: 177 TALAEEGKLDPVIGRDNEIRRVVRILCRRTKNNPILIGEPGVGKSAIAEGLAQRIVNRDV 236
Query: 230 PSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEA--EGK-VILFIDEIHLVLG 286
P++L RL +LDMGAL+AGAKYRGE+EER+K+VL EVE+A EG VILFIDE HL++
Sbjct: 237 PASLI-ARLYSLDMGALMAGAKYRGEYEERIKSVLNEVEKAIEEGPGVILFIDEFHLIMA 295
Query: 287 AGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPD 346
G MDAANLFKP+LARG+LRCIGATTL+EYR+YVEKD A ERRF QV V EPSVP+
Sbjct: 296 GS---GGMDAANLFKPLLARGKLRCIGATTLKEYREYVEKDPALERRFAQVIVNEPSVPE 352
Query: 347 TVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQL 406
T+SILRG++EKYE HHGVRI D AL+ AAQL+ RY+T R LPD AIDLVDEACA+VRV
Sbjct: 353 TISILRGIREKYEVHHGVRILDGALISAAQLAHRYLTSRRLPDSAIDLVDEACASVRVTR 412
Query: 407 DSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKE 466
++ PE ID L+R++++LE+E+HALE+EKD+ASK RL++ RK + D+ D+L+PL Y+ E
Sbjct: 413 ETAPEAIDQLQRRKLELEVEIHALEREKDEASKERLIKARKAIADVEDQLKPLQAAYEAE 472
Query: 467 KERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL 526
K+R DE++ ++++ +EL EAERRYDLA A+DLRY AI E++ + QLE +++E+L
Sbjct: 473 KKRGDEVQNVRKRIDELKAKADEAERRYDLATASDLRYYAIPELQNRLAQLESKKAEEDL 532
Query: 527 ML---TETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAE 572
T+ V P+QIAE+V RWT IPVTRL EKE+L +G EAV AVA
Sbjct: 533 AHGSGTDVVTPEQIAEIVGRWTNIPVTRLMSTEKEKLLRMEKILAESVVGQPEAVKAVAN 592
Query: 573 SVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHS 632
++ SR+GL +P SFLF GP+G GKT ++K LA LFD ++RID SEY E+HS
Sbjct: 593 AIRLSRSGLRNANRPIASFLFAGPSGTGKTLMSKTLATLLFDSPEAMIRIDGSEYSEKHS 652
Query: 633 VSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDG 692
++RLIG+PPGYVGH+EGGQLTE +RR+PYS+VL DE+EKA + LQVLDDGRLTDG
Sbjct: 653 IARLIGSPPGYVGHDEGGQLTEYIRRKPYSIVLIDEIEKASREFYQLFLQVLDDGRLTDG 712
Query: 693 QGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVA-RDQVLQEVRKHFRPELLNRLDEI 751
QGR VDFRNTVIIMT NLGA L MG+ ++ A R+ V+ +R HF PE +NR+DEI
Sbjct: 713 QGRVVDFRNTVIIMTGNLGAAFL--NDMGEGPVKPATRELVMGAIRGHFPPEFINRIDEI 770
Query: 752 VVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRW 811
V+F LS + K+ L++K+V RLA+R + L + DAA + +++ Y P YGARP+ R
Sbjct: 771 VIFRTLSRNNVLKIVDLRLKEVHERLADRKMTLQLDDAAKNYLMSIGYSPAYGARPLNRA 830
Query: 812 LEKKVVTELSRMLVREEIDENSTVYI 837
++++++ LS M++ E I + T+ +
Sbjct: 831 IQQELLNPLSVMILSERIRDGETIKV 856
>gi|407474786|ref|YP_006789186.1| chaperone protein ClpB [Clostridium acidurici 9a]
gi|407051294|gb|AFS79339.1| chaperone protein ClpB [Clostridium acidurici 9a]
Length = 862
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/857 (51%), Positives = 617/857 (71%), Gaps = 23/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EAI +A++ + Q +HL +ALL G+ A+ I G +
Sbjct: 1 MNLEKFTQKSQEAITLANQETIKQENQQIEEIHLHLALLEQTDGLIAKLIGLMGKDLNLI 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+E + KLP + AS L K++ A+ K D +++V+ L +GLL++
Sbjct: 61 KSE--VKNEINKLPKVSGGASMPYASRQLQKILLTAEDEAKKLKDEYVSVEHLYIGLLKE 118
Query: 121 SQIG--DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
++FK+ + + + + K+RG + + S + + T++ L+ YGRDLVE+A G
Sbjct: 119 KNTASQNIFKKYNITLQQFLDVLSKVRGNQN--ITSDNPEDTYEVLEKYGRDLVEEAKSG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DP+IGRD EIR +RILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP L
Sbjct: 177 KIDPIIGRDGEIRNAIRILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNGDVPEGLKGK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LD+ +L+AGAK+RGEFEERLKAVLKE+E++EG++ILFIDEIH ++GAGRT+G+MDA
Sbjct: 237 TIFSLDLSSLIAGAKFRGEFEERLKAVLKEIEKSEGRIILFIDEIHTIVGAGRTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ+V V EP+V D+++ILRG+KE
Sbjct: 297 GNILKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQKVMVDEPTVEDSIAILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHG+RI D A++ LS RYIT R LPDKAIDL+DEA + +R+++DS P E+D L
Sbjct: 357 KYEIHHGIRISDSAVISCVTLSDRYITDRFLPDKAIDLMDEASSMLRMEIDSMPFELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK +QL+IE +++KEKD+AS RL ++KE+ L ++ L +++ EKE I++I +
Sbjct: 417 RRKILQLQIEAESMKKEKDEASLGRLENIKKEISTLEEEANKLKAQWELEKEGINKINEI 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLEGNQSDENLMLTETVGPD 535
K++ + ++EAER+YDL R A LRYG + E+E + + E + EN ML E V
Sbjct: 477 KKEIDVTKIQIEEAERKYDLERVAILRYGKLSELEKQLEDEKEKQEHKENTMLREEVTNV 536
Query: 536 QIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IAE+V+RWTGIPV++L + E KER+IG +AV V+++V+R+RAGL
Sbjct: 537 EIAEIVARWTGIPVSKLVEGEKQKLLHLEEILKERVIGQEKAVKDVSDAVIRARAGLKDI 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTELAK ++E LFD E ++RIDMSEYME+HSVSRLIGAPPGYV
Sbjct: 597 NKPIGSFIFLGPTGVGKTELAKTISETLFDSEKNIIRIDMSEYMEKHSVSRLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYS+VLFDE+EKAH VFN LLQVLDDGRLTD QG+TVDF+NT+I
Sbjct: 657 GYDEGGQLTEAVRRKPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTDNQGKTVDFKNTII 716
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+++L+ G+ G++T + AR++V+ +R +F+PE LNR+DEI++F PL E +
Sbjct: 717 IMTSNIGSQYLIDGIDESGEITEE-AREEVMDTMRVNFKPEFLNRIDEIIMFKPLGKESI 775
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
K+ L + D+ RL++R + + +T+ A + +L ++Y P YGARPI+R++++ V TEL +
Sbjct: 776 YKIIDLLLDDIRARLSDRNIQIELTELAKEYILKDAYSPTYGARPIKRYIQRFVETELGK 835
Query: 823 MLVREEIDENSTVYIDA 839
M+++ +I + TV +D
Sbjct: 836 MIIKGDISDKDTVIVDV 852
>gi|302384881|ref|YP_003820703.1| ATP-dependent chaperone ClpB [Clostridium saccharolyticum WM1]
gi|302195509|gb|ADL03080.1| ATP-dependent chaperone ClpB [Clostridium saccharolyticum WM1]
Length = 862
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/867 (52%), Positives = 617/867 (71%), Gaps = 29/867 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ +LA G+ Q H+ +LL+ + + I +
Sbjct: 1 MNINKFTQKSMEAVQNCEKLAYEYGNQQIEQEHMLYSLLTMEDSLILKLITKMNIQK--- 57
Query: 61 SAERVFN---QAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
E+ N QAM+KLP ++ S L KV+ A+ K GD +++V+ L L +
Sbjct: 58 --EQFINETAQAMEKLPKVRGG--QLYISNDLNKVLISAEDEAKVMGDEYVSVEHLFLAM 113
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L+ + +LF+ G+ + +RG + +V + + + T+ L YG D+VE+A
Sbjct: 114 LKTPSKSVKELFRNYGITRETFLQALSTVRGNQ--RVVNDNPEATYDTLTKYGFDMVERA 171
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L
Sbjct: 172 RDQKLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGL 231
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D RL ALDMGAL+AGAKYRGEFEERLKAVL EV++++G++ILFIDE+H ++GAG+TEGS
Sbjct: 232 KDKRLFALDMGALLAGAKYRGEFEERLKAVLDEVKKSDGQIILFIDELHTIVGAGKTEGS 291
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA N+ KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQ V V EPSV DT+SILRG
Sbjct: 292 MDAGNMLKPMLARGELHCIGATTLDEYRQYIEKDQALERRFQPVMVNEPSVEDTISILRG 351
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+
Sbjct: 352 LKERYEVYHGVKITDSALVSAAALSDRYISERFLPDKAIDLVDEACAMIKTELDSMPAEL 411
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L R+ MQ+EIE AL+KE D+ S+ RL E++KEL +L D+ +++ EK +D +
Sbjct: 412 DELSRRIMQMEIEEAALKKETDRLSQDRLAELQKELAELHDEFTSQKAQWENEKASVDRL 471
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETV 532
L+++ E + +Q A+++YDL RAA+L+YG + +++ + E +++L L E+V
Sbjct: 472 SSLREEIETINREIQAAQQKYDLNRAAELQYGKLPQLQKELEAEEERVRNQDLSLVHESV 531
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
++I+ +VS+WTGIPV+RL + E+ +R+IG EAV+ V E+++RS+AG+
Sbjct: 532 TEEEISRIVSKWTGIPVSRLTEGERNKTLHLDQELHKRVIGQDEAVSKVTEAIIRSKAGI 591
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTELAKALAE LFDDEN +VRIDMSEYME+HSVSRLIGAPP
Sbjct: 592 KDPTKPIGSFLFLGPTGVGKTELAKALAESLFDDENNIVRIDMSEYMEKHSVSRLIGAPP 651
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD G+TVDF+N
Sbjct: 652 GYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSTGKTVDFKN 711
Query: 702 TVIIMTSNLGAEHLLSGMMGK-VTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
T+IIMTSN+G+++LL+G+ + + A+ V+ ++R HFRPE LNRLDE+++F PL E
Sbjct: 712 TIIIMTSNIGSQYLLAGIDEEGYIKEDAQAMVMNDLRNHFRPEFLNRLDEMILFKPLDKE 771
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + L + D+ R+ + + + +TD A + V+ + YDP+YGARP++R+L+K V T
Sbjct: 772 NIAGIIDLLLADLNKRVENQELKIELTDQAKEFVVEQGYDPVYGARPLKRYLQKHVETLA 831
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLV 847
+R+++ +E+ + + ID S G L+
Sbjct: 832 ARIILGDEVRAGNVIVIDVSEDGQKLI 858
>gi|310659286|ref|YP_003937007.1| protein disaggregation chaperone [[Clostridium] sticklandii]
gi|308826064|emb|CBH22102.1| protein disaggregation chaperone [[Clostridium] sticklandii]
Length = 864
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/857 (52%), Positives = 611/857 (71%), Gaps = 24/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K T K+ EAI + E+A GH Q HL ALL+ + ++ + G +A
Sbjct: 1 MNMEKLTQKSQEAIVQSQEMALRLGHQQMETEHLHYALLASEDSLISKLLTMMGKNVSAI 60
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ + KLP Q + + S +V+ +AQ K D +++V+ L L +LE
Sbjct: 61 LID--LGNHLDKLPKVQGESVSSVYPSRRYNEVLVKAQDEAKVFQDEYISVEHLYLAVLE 118
Query: 120 DSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+Q D+ + + K+R +K+ S + + T+ L YGRDLVE A
Sbjct: 119 QNQGYTKDIISRYHIDKNEFLQALSKVRS--NQKITSQNPEDTYDVLNKYGRDLVEMARK 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV DVP L D
Sbjct: 177 GKLDPVIGRDEEIRRAIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVNHDVPEGLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ ALDMGAL+AGAKYRGEFEERLKAVL EV ++EG++ILFIDE+H ++GAG+TEG+MD
Sbjct: 237 KTIFALDMGALIAGAKYRGEFEERLKAVLNEVSKSEGQIILFIDELHTIVGAGKTEGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+L CIGATTL+EYRKY+EKDAA ERRFQ V V +P V DT+SILRG+K
Sbjct: 297 AGNLLKPMLARGELHCIGATTLDEYRKYIEKDAALERRFQPVLVDQPDVEDTISILRGIK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EK+E HHGVRI D A++ A LS +YI+ R LPDKAIDL+DEA + +R ++DS P E+D
Sbjct: 357 EKFEIHHGVRITDNAIIACAVLSNKYISDRFLPDKAIDLMDEAASMIRTEIDSMPTELDA 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ RK MQ+EIE AL+KE D +SKARL +++KEL L+++ + +++ EKE I +I+
Sbjct: 417 ISRKIMQMEIEQQALKKETDTSSKARLEDLQKELAILKEQYSSMKSQWELEKENIIKIKD 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL-MLTETVGP 534
L+++ E+ +++AERRYDL A L++G + E+E + NQ+ +L E V
Sbjct: 477 LQKEIEQTRHKIEDAERRYDLEELAMLKHGKLPELEKKLESERENQAKSKAQLLKEEVTE 536
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
D+IAE++S+WTGIPVT+L ++E+E+L IG EAV+ VA++VLR+RAGL
Sbjct: 537 DEIAEIISKWTGIPVTKLVESEREKLLHLPSLLHNRVIGQDEAVDLVADAVLRARAGLKD 596
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P++P GSF+FLGPTGVGKTELAKALA+ LFD E +VRIDMSEY E+H+V+RLIGAPPGY
Sbjct: 597 PRRPIGSFIFLGPTGVGKTELAKALAQALFDTEENIVRIDMSEYQEKHTVARLIGAPPGY 656
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFNTLLQ+LDDGRLTD +G+TV+F++TV
Sbjct: 657 VGYEEGGQLTEAVRRKPYSVILFDEIEKAHPEVFNTLLQLLDDGRLTDSKGKTVNFKDTV 716
Query: 704 IIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSN+G+ LL GM G+++ V ++ VL +R +F+PE LNR+D+IV+F PL+ +
Sbjct: 717 VIMTSNIGSNLLLDGMQESGEISDAV-KENVLNTLRANFKPEFLNRIDDIVMFKPLTKSE 775
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ L + D+ RL++R + L V+D A + + SY +YGARP++R+L+K + T ++
Sbjct: 776 IVKIVELSLVDIQNRLSDRNIKLEVSDDAKNFIADNSYSKVYGARPVKRYLQKHIETPIA 835
Query: 822 RMLVREEIDENSTVYID 838
R+L++ E+ + T+YID
Sbjct: 836 RLLIQGEVQDYQTIYID 852
>gi|374328354|ref|YP_005078538.1| Chaperonin ClpB [Pseudovibrio sp. FO-BEG1]
gi|359341142|gb|AEV34516.1| Chaperonin ClpB [Pseudovibrio sp. FO-BEG1]
Length = 859
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/863 (53%), Positives = 605/863 (70%), Gaps = 22/863 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K+T + I A A GH QFTP H+ LL D G+ A I AGG Q
Sbjct: 1 MDFEKYTDRARGFIQSAQTYALGQGHQQFTPAHILKVLLDDSEGMSAGLIERAGGR--VQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
+ LP + ++ + ++ +AQ + GD+ + V++L+L L
Sbjct: 59 DVRLQIETDLAALPKVSGGNGQLYLAPETARLFEQAQKIAEKAGDSFVTVERLLLALAMD 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+DS+ G +AGV + + +LR +GR +SAS + F ALK + +DL E A G
Sbjct: 119 KDSKAGKALSQAGVTPNALNEVINELR--KGRTADSASAENQFDALKKFAQDLTEAAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRAIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLK VL EV+ A+G +ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLLALDMGALIAGAKYRGEFEERLKGVLNEVQAADGGIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DT+SILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D A+V AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D L
Sbjct: 357 KYELHHGVRISDSAIVSAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL+KE D+A+K RL + KEL DL ++ L R++ EK+++ +++
Sbjct: 417 DRRIIQLKIEREALKKEDDEATKDRLQRLEKELVDLEEESNALTQRWQAEKDKLSGEQKI 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ +E L++A+R +LARA +L YG I ++E + + + +N ML ETV +
Sbjct: 477 KEQLDEARTELEQAQRVGNLARAGELSYGVIPDLEKKLANAQTAEDVDNTMLNETVSSES 536
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA+VVSRWTGIP+ ++ + E+E+L +G EAV+AV+ +V RSRAGL P
Sbjct: 537 IAQVVSRWTGIPIDKMLEGEREKLLRMEDELAKRVVGQQEAVHAVSTAVRRSRAGLQDPN 596
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDDE +VR+DMSE+ME+HSV+RLIGAPPGYVG
Sbjct: 597 RPIGSFMFLGPTGVGKTELTKALASYLFDDETAMVRVDMSEFMEKHSVARLIGAPPGYVG 656
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 657 YEEGGVLTEAVRRRPYQVVLFDEVEKAHGDVFNVLLQVLDDGRLTDGQGRTVDFRNTLII 716
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE L + G+ + R V+ V+ HFRPE LNRLDEI++F L Q+ K+
Sbjct: 717 MTSNLGAEFLAAQGEGE-DAEAVRGPVMDAVKAHFRPEFLNRLDEIILFHRLQRTQMSKI 775
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+K + L +R + L + D A+ + + YDP YGARP++R ++K+V L+ ML+
Sbjct: 776 VEIQLKRLQKLLDDRKMVLDLDDGAMGWLAEKGYDPTYGARPLKRVIQKQVQDPLAEMLL 835
Query: 826 REEIDENSTVYIDASPKGDNLVY 848
I + T+ + S D LV+
Sbjct: 836 AGSISDGQTIKV--SNGSDRLVF 856
>gi|414165245|ref|ZP_11421492.1| chaperone ClpB [Afipia felis ATCC 53690]
gi|410883025|gb|EKS30865.1| chaperone ClpB [Afipia felis ATCC 53690]
Length = 878
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/862 (53%), Positives = 607/862 (70%), Gaps = 29/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MN +K+T + I A LA GH QF+PLH+ LL D G+ I+ AGG + A
Sbjct: 1 MNVEKYTDRVKGFIQSAQSLALREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGNSRAI 60
Query: 60 -QSAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILG 116
Q+ E QA+ KLP S A A T QAA+KA GD+ + V++L+L
Sbjct: 61 LQATE----QALAKLPKVSGGGAGQIYLAPETARAFTAAEQAAEKA-GDSFVTVERLLLA 115
Query: 117 LL--EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
L +DS+ G L + GV + + + LR +GR +SAS + + ALK Y RDL +
Sbjct: 116 LTLDKDSEAGKLLAQGGVTPQNLNAAINALR--KGRTADSASAENAYDALKKYARDLTQA 173
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP +
Sbjct: 174 ARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPES 233
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D +L++LD+GA+VAGAKYRGEFEERLKAVL+EV AEG +ILFIDE+H ++GAG+ +G
Sbjct: 234 LKDKKLLSLDLGAMVAGAKYRGEFEERLKAVLQEVTSAEGGIILFIDEMHTLIGAGKADG 293
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA+NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ V+V+EP+V DT+SILR
Sbjct: 294 AMDASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILR 353
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKEKYE HHG+RI D ALV AA LS RYIT R LPDKAIDLVDEA A +++Q+DS+PEE
Sbjct: 354 GLKEKYELHHGIRIADSALVAAATLSNRYITDRFLPDKAIDLVDEAAARLKMQVDSKPEE 413
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D+L+R+ ++L+IE AL+KE D SK+RL + +L DL K L R++ EK ++ +
Sbjct: 414 LDSLDREIIRLKIEQEALKKETDAGSKSRLQTLEGDLADLEKKSADLTSRWQSEKSKLSD 473
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETV 532
+++K + E+L L A+R+ + RA +L YG I ++E + +E ++S + E V
Sbjct: 474 AQKMKSELEQLRTELANAQRKGEYQRAGELAYGRIPDLEKKLAAVEASESTST--IDEAV 531
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
D IA+VVSRWTG+PV ++ + EK++L IG A+AV AV+ +V R+RAGL
Sbjct: 532 TADSIAQVVSRWTGVPVDKMLEGEKDKLLRMEEMLGKRVIGQAQAVRAVSTAVRRARAGL 591
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTEL KALAE LFDDE LVR+DMSEYME+HSV+RLIGAPP
Sbjct: 592 QDPNRPIGSFMFLGPTGVGKTELTKALAEYLFDDETALVRMDMSEYMEKHSVARLIGAPP 651
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRN
Sbjct: 652 GYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRN 711
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+IIMTSN+GAE L++ G+ T V RDQV+ VR HFRPE LNR+DEI++F L +
Sbjct: 712 TLIIMTSNIGAEFLVNQPEGEDTNAV-RDQVMGMVRTHFRPEFLNRIDEIILFHRLQKSE 770
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + +Q + L +R + L + D + + +DP YGARP++R +++ V L+
Sbjct: 771 MGSIVEIQFNRLRKLLEDRKIDLVLDKKGRDWLAEKGWDPAYGARPLKRVIQRSVQDPLA 830
Query: 822 RMLVREEIDENSTVYIDASPKG 843
M++ E+ + +TV I A G
Sbjct: 831 EMVLAGEVQDGATVKISAGKDG 852
>gi|254472239|ref|ZP_05085639.1| ATP-dependent chaperone ClpB [Pseudovibrio sp. JE062]
gi|211958522|gb|EEA93722.1| ATP-dependent chaperone ClpB [Pseudovibrio sp. JE062]
Length = 859
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/863 (53%), Positives = 605/863 (70%), Gaps = 22/863 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K+T + I A A GH QFTP H+ LL D G+ A I AGG Q
Sbjct: 1 MDFEKYTDRARGFIQSAQTYALGQGHQQFTPAHILKVLLDDSEGMAAGLIERAGGR--VQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
+ LP + ++ + ++ +AQ + GD+ + V++L+L L
Sbjct: 59 DVRLQIETDLAALPKVSGGNGQLYLAPETARLFEQAQKIAEKAGDSFVTVERLLLALAMD 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+DS+ G +AGV + + +LR +GR +SAS + F ALK + +DL E A G
Sbjct: 119 KDSKAGKALAQAGVTPNALNEVINELR--KGRTADSASAENQFDALKKFAQDLTEAAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRAIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLK VL EV+ A+G +ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLLALDMGALIAGAKYRGEFEERLKGVLNEVQAADGGIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DT+SILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D A+V AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D L
Sbjct: 357 KYELHHGVRISDSAIVSAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL+KE D+A+K RL + KEL DL ++ L R++ EK+++ +++
Sbjct: 417 DRRIIQLKIEREALKKEDDEATKDRLQRLEKELVDLEEESNALTQRWQAEKDKLSGEQKI 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ +E L++A+R +LARA +L YG I ++E + + + +N ML ETV +
Sbjct: 477 KEQLDEARTELEQAQRVGNLARAGELSYGVIPDLEKKLANAQTAEDVDNTMLNETVSSES 536
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA+VVSRWTGIP+ ++ + E+E+L +G EAV+AV+ +V RSRAGL P
Sbjct: 537 IAQVVSRWTGIPIDKMLEGEREKLLRMEDELAKRVVGQQEAVHAVSTAVRRSRAGLQDPN 596
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDDE +VR+DMSE+ME+HSV+RLIGAPPGYVG
Sbjct: 597 RPIGSFMFLGPTGVGKTELTKALASYLFDDETAMVRVDMSEFMEKHSVARLIGAPPGYVG 656
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 657 YEEGGVLTEAVRRRPYQVVLFDEVEKAHGDVFNVLLQVLDDGRLTDGQGRTVDFRNTLII 716
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE L + G+ + R V+ V+ HFRPE LNRLDEI++F L Q+ K+
Sbjct: 717 MTSNLGAEFLAAQGEGE-DAEAVRGPVMDAVKAHFRPEFLNRLDEIILFHRLQRTQMSKI 775
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+K + L +R + L + D A+ + + YDP YGARP++R ++K+V L+ ML+
Sbjct: 776 VEIQLKRLQKLLDDRKMVLDLDDGAMGWLAEKGYDPTYGARPLKRVIQKQVQDPLAEMLL 835
Query: 826 REEIDENSTVYIDASPKGDNLVY 848
I + T+ + S D LV+
Sbjct: 836 AGSISDGQTIKV--SNGSDRLVF 856
>gi|428318743|ref|YP_007116625.1| ATP-dependent chaperone ClpB [Oscillatoria nigro-viridis PCC 7112]
gi|428242423|gb|AFZ08209.1| ATP-dependent chaperone ClpB [Oscillatoria nigro-viridis PCC 7112]
Length = 871
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/855 (51%), Positives = 628/855 (73%), Gaps = 25/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EA+A E+ + Q HL ALL SG+ A ++ N G + +
Sbjct: 5 NPNQFTEKAWEALARTPEIVKAGQQQQLESEHLMKALLEQESGL-ASSLFNKAGVSVPKL 63
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R ++ + + P T + + +L ++ RA+ +K +GD ++++ LILG ++D
Sbjct: 64 RDRT-DEFISRQPKITGSGGNVYLGRSLDTLLDRAETYRKDYGDEFISIEHLILGYVKDD 122
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G +L +E + A++K + ++RGK KV + + ++AL+ YGRDL E A GKL
Sbjct: 123 RFGKNLLQEFKLDEAKLKDIITQVRGKN--KVTDQNPEGKYEALEKYGRDLTEAARQGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D +L
Sbjct: 181 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIITGDVPQSLKDRQL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAK+RGEFEERLKAVLKEV ++ GKVILFIDEIH V+GAG T+GSMDA N
Sbjct: 241 ISLDMGALIAGAKFRGEFEERLKAVLKEVTDSNGKVILFIDEIHTVVGAGATQGSMDAGN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P+V DTVSILRGLKE+Y
Sbjct: 301 LLKPMLARGELRCIGATTLDEYRKYLEKDAALERRFQQVYVDQPTVEDTVSILRGLKERY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 361 EVHHGVKISDSALVAAATLSTRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+ +QLE+E +L+KE + AS RL + K+L +L+++ L +++ EK I I+++K+
Sbjct: 421 RILQLEMERLSLQKESNVASIERLERLEKDLANLKEQQSALNAQWQSEKGVIGSIQKIKE 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAI----GQLEGNQSDENLMLTETVGP 534
+ +++ +Q+AE +YDL RAA+L+Y + E++ + QL Q+ +L E V
Sbjct: 481 QIDKVNIEIQQAELKYDLNRAAELKYSKLTELQKQLQQAESQLSATQTTGKTLLREEVTE 540
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++E ++L IG EAV AVA+++ RSRAGL
Sbjct: 541 GDIAEIISKWTGIPISKLVESEMQKLLHLEDELHKRVIGQDEAVTAVADAIQRSRAGLAD 600
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 601 PNRPVASFIFLGPTGVGKTELAKALAAYLFDTEEAIVRIDMSEYMEKHAVSRLIGAPPGY 660
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD QG TVDF+N+V
Sbjct: 661 VGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNIMLQILDDGRVTDAQGHTVDFKNSV 720
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + G ++ R +V++ +R FRPE LNR+DE+++F LS +LR
Sbjct: 721 IIMTSNVGSQYILD-VAGD--NELMRSRVMEAMRGTFRPEFLNRIDEMIIFHGLSKTELR 777
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ LQ+K + RLA+R ++L ++++A+D + YDP+YGARP++R +++++ T++++
Sbjct: 778 QIVLLQVKRLEKRLADRKMSLKLSESAIDFLAEIGYDPVYGARPLKRGIQRELETQMAKG 837
Query: 824 LVREEIDENSTVYID 838
++R + + T+++D
Sbjct: 838 ILRGDFADGDTIFVD 852
>gi|153931423|ref|YP_001382793.1| clpB protein [Clostridium botulinum A str. ATCC 19397]
gi|153935231|ref|YP_001386344.1| clpB protein [Clostridium botulinum A str. Hall]
gi|152927467|gb|ABS32967.1| clpB protein [Clostridium botulinum A str. ATCC 19397]
gi|152931145|gb|ABS36644.1| clpB protein [Clostridium botulinum A str. Hall]
Length = 866
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/867 (51%), Positives = 618/867 (71%), Gaps = 25/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K T K +AI + +A H Q +HL AL+S G+ + G
Sbjct: 1 MNIEKLTLKVQQAINDSQLVAVKYNHQQIDTIHLFSALISQDDGLIPNILGKMGVNIRDI 60
Query: 61 SAE--RVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+AE RV + M K+ + + + +V RA+ K D++++V+ ++L ++
Sbjct: 61 NAETNRVLDN-MPKVLGEGAQSSSVYPTRRFEEVFVRAEQIAKDFKDSYISVEHVLLAIM 119
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ + + + ++ GV + + +RG ++V++ + T++AL YGR+LVE+A
Sbjct: 120 DVDRNTVLPILEKFGVKKSEFLKALSAVRG--SQRVDNQDPEGTYEALVKYGRNLVEEAK 177
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP +L
Sbjct: 178 KHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPESLK 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG++ILFIDEIH ++GAG+TEGSM
Sbjct: 238 NKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGRIILFIDEIHTIVGAGKTEGSM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V EP+V DTVSILRGL
Sbjct: 298 DAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVITDEPTVEDTVSILRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E +HG+RI D A+V AA+LS+RYIT R+LPDKAIDL+DEACA +R +DS P E+D
Sbjct: 358 KERFEIYHGIRIHDSAIVAAAKLSSRYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+++RK QLEIE AL KEKD ASK RL + KEL +L++K + + +Y+ EK I +IR
Sbjct: 418 SMKRKIFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIR 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTET 531
LK+K +++ +++AER YDL + A+L+YG I ++ I + E S+ N ML E
Sbjct: 478 DLKEKLDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEE 537
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V +I+E++S+WTGIPVTRL + E+++L IG EAV AV +V+R+RAG
Sbjct: 538 VTEQEISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME++SVSRLIGAP
Sbjct: 598 LKDPRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEENIIRIDMSEYMEKYSVSRLIGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+ +DF+
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKVIDFK 717
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSNLG+ +LL + + R +V + ++ F+PE LNR+D+I++F PL+ E
Sbjct: 718 NTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEALKARFKPEFLNRVDDIIMFKPLTVE 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++++ + + D+ RL ++ + L +TD+A DI+ E YDPIYGARP++R++E + TE+
Sbjct: 778 DIKRIIDIFLDDIRKRLKDKNIQLKITDSAKDIMAKEGYDPIYGARPLKRYIEDTIETEI 837
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLV 847
++ ++ I E +TV +D KG+++V
Sbjct: 838 AKQIIAGNIYEGTTVGVDL--KGESIV 862
>gi|75908552|ref|YP_322848.1| ATPase [Anabaena variabilis ATCC 29413]
gi|75702277|gb|ABA21953.1| ATPase [Anabaena variabilis ATCC 29413]
Length = 872
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/855 (51%), Positives = 621/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA E+A Q HL ALL A I G N +
Sbjct: 5 NPNQFTEKAWEAIAHTPEIAKQHQQQQIESEHLMKALLEQDG--LASGILTKAGVNLQKI 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R Q +++ P + + +L ++ RA+A +K D +++++ L+L +D
Sbjct: 63 GDRT-EQYIQRQPKVSGNSTSVYLGRSLDTLLDRAEAHRKDFKDEYISIEHLLLAYPKDD 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E + ++K+ ++++RG + V + + +Q+L+ YGRDL E A G+L
Sbjct: 122 RFGKGLFQEFALDEGKLKNIIKQVRGSQ--TVTDQNPEGKYQSLEKYGRDLTEAARKGQL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGA++AGAK+RGEFEERLKAVLKEV E+ G ++LFIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDMGAMIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D +LV AA LS+RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKISDSSLVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + KEL DL+++ + L +++ EK+ I++++ +K+
Sbjct: 420 KILQLEMEKLSLQKESDAASRERLERLEKELADLKEEQRTLNTQWQSEKDVINKLQSVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTETVGP 534
+ +++ +Q+AER YDL RAA+L+YG + + +EA +L Q +L E V
Sbjct: 480 EIDKVNLEIQQAERDYDLNRAAELKYGKLTDLHRRLEATERELSQTQGTGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L IG EAV AVA+++ RSRAGL
Sbjct: 540 ADIAEIISKWTGIPISKLVESEKEKLLHLEDELHHRVIGQDEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA +FD E +VRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFVFLGPTGVGKTELAKALASYMFDTEEAMVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QG TVDF+NT+
Sbjct: 660 VGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L R +V++ +R FRPE LNR+DE+++F L ++LR
Sbjct: 720 IIMTSNIGSQYILDIAGDNSRYDEMRHRVMEAMRNSFRPEFLNRIDEVIIFHGLDKKELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ++ + RL +R ++L ++DAALD + YDP++GARP++R +++++ T++++
Sbjct: 780 QIVQLQVERLKARLGDRKISLRLSDAALDFLAEVGYDPVFGARPLKRAIQRELETQIAKA 839
Query: 824 LVREEIDENSTVYID 838
++R E ++ T+++D
Sbjct: 840 ILRGEFNDGDTIFVD 854
>gi|168177755|ref|ZP_02612419.1| clpB protein [Clostridium botulinum NCTC 2916]
gi|182671320|gb|EDT83294.1| clpB protein [Clostridium botulinum NCTC 2916]
Length = 866
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/867 (51%), Positives = 617/867 (71%), Gaps = 25/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K T K +AI + +A H Q +HL AL+S G+ + G
Sbjct: 1 MNIEKLTLKVQQAINDSQLVAVKYNHQQIDTIHLFSALISQDDGLIPNILGKMGVNIRDI 60
Query: 61 SAE--RVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+AE RV + M K+ + + + +V +A+ K D++++V+ ++L ++
Sbjct: 61 NAETNRVLDN-MPKVLGEGAQSSSVYPTRRFEEVFVKAEQIAKDFKDSYISVEHVLLAIM 119
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ + + + ++ GV + + +RG ++V+S + T++AL YGR+LVE+A
Sbjct: 120 DVDRNTVLPILEKFGVKKSEFLKALSAVRG--SQRVDSQDPEGTYEALVKYGRNLVEEAK 177
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP +L
Sbjct: 178 KHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPESLK 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG++ILFIDEIH ++GAG+TEGSM
Sbjct: 238 NKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGRIILFIDEIHTIVGAGKTEGSM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V EP+V DTVSILRGL
Sbjct: 298 DAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVITDEPTVEDTVSILRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E +HG+RI D A+V AA+LS+RYIT R+LPDKAIDL+DEACA +R +DS P E+D
Sbjct: 358 KERFEIYHGIRIHDSAIVAAAKLSSRYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+++RK QLEIE AL KEKD ASK RL + KEL +L++K + + +Y+ EK I +IR
Sbjct: 418 SMKRKIFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIR 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTET 531
LK+K +++ +++AER YDL + A+L+YG I ++ I + E S+ N ML E
Sbjct: 478 DLKEKLDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEE 537
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V +I+E++S+WTGIPVTRL + E+++L IG EAV AV +V+R+RAG
Sbjct: 538 VTEQEISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME++SVSRLIGAP
Sbjct: 598 LKDPRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEENIIRIDMSEYMEKYSVSRLIGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+ +DF+
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKVIDFK 717
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSNLG+ +LL + + R +V + ++ F+PE LNR+D+I++F PL+ E
Sbjct: 718 NTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEALKARFKPEFLNRVDDIIMFKPLTVE 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++++ + + D+ RL ++ + L +TD+A DI+ E YDPIYGARP++R++E + TE+
Sbjct: 778 DIKRIIDIFLDDIRKRLKDKNIQLKITDSAKDIMAKEGYDPIYGARPLKRYIEDTIETEI 837
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLV 847
++ ++ I E +TV +D KG ++V
Sbjct: 838 AKQIIAGNIYEGTTVGVDL--KGKSIV 862
>gi|428211800|ref|YP_007084944.1| ATP-dependent chaperone ClpB [Oscillatoria acuminata PCC 6304]
gi|428000181|gb|AFY81024.1| ATP-dependent chaperone ClpB [Oscillatoria acuminata PCC 6304]
Length = 874
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/855 (51%), Positives = 617/855 (72%), Gaps = 24/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K AIA +LA A H Q HL ALL + +I + G N Q
Sbjct: 5 NPNQFTEKAWAAIAQTPDLAKQAQHQQIESEHLMKALLEQEG--LSSSILSKAGVNVQQM 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R Q + + P + + + T+ ++ RA A +K + D +++++ L+LG +D
Sbjct: 63 RDRT-EQFINRQP-KVSSISSVYLGRTVDTLLDRADAYRKEYADEYISIEHLLLGFAKDD 120
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E + ++K + ++RG + KV + + +Q+L+ YGRDL + A GKL
Sbjct: 121 RFGKGLFQEFKLTEQKLKETISQVRGNQ--KVTDQNPEGKYQSLEKYGRDLTQAAREGKL 178
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D +L
Sbjct: 179 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGDVPQSLKDRQL 238
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I LDMG+L+AGAKYRGEFEERLKAVLKEV E+ G +ILFIDEIH V+GAG T+G+MDA N
Sbjct: 239 ITLDMGSLIAGAKYRGEFEERLKAVLKEVTESGGNIILFIDEIHTVVGAGATQGAMDAGN 298
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVY+ +PSV D++SILRGLKE+Y
Sbjct: 299 LLKPMLARGELRCIGATTLDEYRKYLEKDAALERRFQQVYIDQPSVADSISILRGLKERY 358
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 359 EVHHGVKISDSALVAAATLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 418
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L E D AS+ RL + KEL +L+++ L +++ EK+ I +I+ +K+
Sbjct: 419 KILQLEMERLSLRNESDLASQDRLERLDKELGNLKEEQHTLNAQWESEKDVIAQIQSIKE 478
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE----GNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG + +++ + Q E NQ+ +L E V
Sbjct: 479 EIDRVNIEIQQAERNYDLNRAAELKYGNLTQLQKQLKQAESNLAANQTSGQTLLREEVTE 538
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++E ++L IG EAV AVA+++ RSRAGL
Sbjct: 539 SDIAEIISKWTGIPISKLVESEMQKLLQLEDELHKRVIGQEEAVTAVADAIQRSRAGLSD 598
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+H+VSRL+GAPPGY
Sbjct: 599 PNRPVASFIFLGPTGVGKTELAKALAAYLFDTEESMVRIDMSEYMEKHAVSRLVGAPPGY 658
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQL+EAVRRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD QG TVDF+N+V
Sbjct: 659 VGYEEGGQLSEAVRRRPYSVILFDEIEKAHPDVFNIMLQILDDGRVTDAQGHTVDFKNSV 718
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++ +L + R +V++ +R +FRPE LNR+DE+++F L EQLR
Sbjct: 719 IIMTSNVGSQFILDVSGEDEEYEEMRGRVMEAMRSNFRPEFLNRIDEMIIFHSLKKEQLR 778
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ++ V RL +R ++L ++D+A+ + YDP+YGARP++R +++++ T++++
Sbjct: 779 QIVQLQVERVIERLRDRKMSLKLSDSAVSFLAEVGYDPVYGARPLKRSIQRELETQIAKS 838
Query: 824 LVREEIDENSTVYID 838
++R + T+++D
Sbjct: 839 ILRGDFTTGDTIFVD 853
>gi|283798701|ref|ZP_06347854.1| ATP-dependent chaperone protein ClpB [Clostridium sp. M62/1]
gi|291073561|gb|EFE10925.1| ATP-dependent chaperone protein ClpB [Clostridium sp. M62/1]
Length = 863
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/857 (52%), Positives = 620/857 (72%), Gaps = 27/857 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG-GENAA 59
MN ++FT K+ EA+ +LA G+ Q HL +LL+ + + I G EN
Sbjct: 1 MNINRFTQKSLEAVQRTEKLAYEYGNQQIDQEHLLYSLLTIDDSLILKLITKMGIQENQF 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ ++ A++KLP + ++ S KV+ A+ KA GD +++V+ L L +L+
Sbjct: 61 LNEVQL---AIEKLPKVSGG--QVYFSQDANKVLVNAEDEAKAMGDEYVSVEHLFLSMLK 115
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ + +LF+ + + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 116 QPNRAVKELFRLYNITREGFLQALSTVRGNQ--RVVSDNPEATYDTLNKYGYDLVERARD 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 174 QKLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLKD 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L ALDMGALVAGAKYRGEFEERLKAVL+EV+++EG++ILFIDE+H ++GAG+TEGSMD
Sbjct: 234 KKLFALDMGALVAGAKYRGEFEERLKAVLEEVKKSEGQIILFIDELHTIVGAGKTEGSMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V+V EP+V DT+SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVHVDEPTVEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
++YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 DRYEVYHGVKITDSALVSAAVLSDRYISDRFLPDKAIDLVDEACAMIKTELDSLPTELDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
R+ MQLEIE AL+KE D+ S+ RL +++KEL +LRD+ +++ EK +D + +
Sbjct: 414 KSRRIMQLEIEEAALKKETDRLSQDRLEDLQKELAELRDEFAAQKAQWENEKASVDRLSK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
L+++ E L +Q A+++YDL RAA+L+YG + E++ + + E + +L L E+V
Sbjct: 474 LREEIEHLNSEIQAAQQKYDLNRAAELQYGKLPELKKQLAEEEEKVKNADLSLVHESVTE 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA ++S+WTGIPV +L ++E+ +R+IG EAV V E+++RS+AG+
Sbjct: 534 EEIARIISKWTGIPVAKLTESERSKTLHMDDILHKRVIGQDEAVTKVTEAIIRSKAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAKALAE LFDDEN +VRIDMSEYME+HSVSRLIGAPPGY
Sbjct: 594 PTKPIGSFLFLGPTGVGKTELAKALAESLFDDENNMVRIDMSEYMEKHSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD G+TVDF+NT+
Sbjct: 654 VGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSTGKTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSN+G+++LL G+ G +T + A + + ++R HFRPE LNRLDEI++F PL+ +
Sbjct: 714 LIMTSNIGSQYLLEGIDENGNIT-EAADNMAMNDLRAHFRPEFLNRLDEIIMFKPLTKDN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L ++DV RLA+R +++++TD+A ++ YDP+YGARP++R+L+K V T +
Sbjct: 773 IGGIIELLVEDVNKRLADRELSISLTDSARQFIVENGYDPVYGARPLKRYLQKHVETLAA 832
Query: 822 RMLVREEIDENSTVYID 838
R+++ + + + ID
Sbjct: 833 RLILADGVRAGDVIQID 849
>gi|307154014|ref|YP_003889398.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 7822]
gi|306984242|gb|ADN16123.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 7822]
Length = 872
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/857 (51%), Positives = 621/857 (72%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAI ++A Q HL +LL + G+ + N A + Q
Sbjct: 5 NPNQFTEKAWEAIVKTPDIAKQNKQQQIESEHLMKSLL-EQEGLASSIFNKANV--SVQR 61
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
++ +++ P+ + + + +L ++ RA+ +K GD ++++ LIL +D
Sbjct: 62 LRDKTDEFIRRQPTLSNPSESVYLGRSLDSLLDRAEGFRKEFGDDFISIEHLILAYAKDD 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E G++ ++K ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGRALFQEFGLSENKLKDIIKQVRGTQ--KVTDQNPEGKYEALEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLRDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALD+G L+AGAKYRGEFEERLKAVLKEV +++G +I+FIDEIH V+GAG T+G+MDA+N
Sbjct: 240 IALDLGGLIAGAKYRGEFEERLKAVLKEVTDSQGNIIMFIDEIHTVVGAGATQGAMDASN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ VYV EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQSVYVDEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADTALVAAAVLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D S+ RL + KEL DL+++ +++ EKE ID++R +K+
Sbjct: 420 KILQLEMERLSLQKEDDPLSRERLGRLEKELADLKEEQTQYNAQWQAEKELIDKLRTVKK 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN----LMLTETVGP 534
+ E++ +Q+AER YD +AA+LRYG + +++ I +LE +D+ +L E V
Sbjct: 480 EIEQVNVEIQQAERDYDYNKAAELRYGKLTDLQRQIKELESQITDKQTSGKTLLREEVVE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L +G EAV AVA+++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEKEKLLHLEDELHQKVVGQDEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E LVRIDMSEYME+H+VSRL+GAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALALNLFDSEEALVRIDMSEYMEKHAVSRLLGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QGRTVDF+NT+
Sbjct: 660 VGYEEGGQLTEAIRRRPYSVILFDEIEKAHNDVFNVMLQILDDGRLTDSQGRTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++ +L R +V++ +R FRPE LNR+DEI++F L QLR
Sbjct: 720 IIMTSNIGSQVILDIAGDDSRYDEMRSRVMEAMRNSFRPEFLNRVDEIIIFHSLQKSQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ+K + RL+E+ ++L +++ ALD + YDP+YGARP++R +++ + T +++
Sbjct: 780 EIVKLQVKRLEDRLSEQKLSLKLSEQALDYLADIGYDPVYGARPLKRAVQRYLETAIAKA 839
Query: 824 LVREEIDENSTVYIDAS 840
++R + + +++D +
Sbjct: 840 ILRGDFKQGDMIFVDVT 856
>gi|449441089|ref|XP_004138316.1| PREDICTED: chaperone protein ClpB1-like [Cucumis sativus]
Length = 752
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/724 (60%), Positives = 568/724 (78%), Gaps = 18/724 (2%)
Query: 163 ALKTYGRDLVEQAGK--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGL 220
AL+TYG DLVE+A K LDP+ GR +EI R++ IL R+TK NP+LIGEPGVGKTA+VE L
Sbjct: 5 ALETYGHDLVEKAEKQTLDPIFGRHKEICRLLTILCRKTKCNPILIGEPGVGKTAIVEAL 64
Query: 221 AQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDE 280
AQ+ G+VP+ L+ R++ LDMGA++AG +RG+ EERLK V+ EV+ +EGKVI+FIDE
Sbjct: 65 AQKFAAGNVPAKLSGARIVELDMGAIMAGTIWRGQLEERLKDVMTEVKGSEGKVIVFIDE 124
Query: 281 IHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVA 340
IH+++ R++ AA + KP L RG RCIGATTL+EY++Y+EKD A RRF+QVYV
Sbjct: 125 IHMLV---RSDHQGTAAEILKPALGRGGFRCIGATTLKEYKRYIEKDGALARRFKQVYVN 181
Query: 341 EPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACA 400
EPSV D+++ILR LKE+YE HH + I+D AL+ AA+LS RYITGR LPDKAIDLVDEA A
Sbjct: 182 EPSVEDSINILRVLKERYEKHHVLIIKDSALIAAAKLSHRYITGRRLPDKAIDLVDEASA 241
Query: 401 NVRVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLM 460
+RVQLD+Q EE+D L+ ++ +LE E++ALEKE+DKAS+ARL + +KEL+D+ ++LQPL+
Sbjct: 242 CMRVQLDTQSEELDELQNEKSKLEAEVNALEKEEDKASQARLPQAKKELNDVNNQLQPLL 301
Query: 461 MRYKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN 520
+Y+K+K ++++ +LKQK++E+L +Q A++R DL RAADLR + +VE IG +E
Sbjct: 302 SKYQKQKSEMEKLTKLKQKKQEILVEIQAAQKRQDLIRAADLRRQKLDDVELKIGDVERR 361
Query: 521 QSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNA 569
+ +TVGP++IA+ VSRWTG+PV+RL EKE ++GLA EAV++
Sbjct: 362 IRKHGFIEKDTVGPEEIADEVSRWTGVPVSRLTGEEKEWVMGLAGRLKKRVVGQNEAVDS 421
Query: 570 VAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYME 629
VAE+V+R RAGL P QP GSFLFLGP+GVGKTELAK LA +LF+DEN +VRIDMSEYME
Sbjct: 422 VAEAVMRFRAGLALPNQPNGSFLFLGPSGVGKTELAKGLAHELFNDENRMVRIDMSEYME 481
Query: 630 QHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRL 689
+HSVSRLIG+PPGYVG+ EGGQLTE V+RRPY VVL DEVEKAH+ V N LLQVLDDGRL
Sbjct: 482 KHSVSRLIGSPPGYVGYHEGGQLTEPVKRRPYCVVLLDEVEKAHVDVLNILLQVLDDGRL 541
Query: 690 TDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLD 749
TDGQG TVDFRNTVIIMTSNLGA HL S MQVAR++V+Q+V++HF+PE +NRLD
Sbjct: 542 TDGQGSTVDFRNTVIIMTSNLGAGHLFSEKY--CPMQVARERVIQKVKEHFKPEFVNRLD 599
Query: 750 EIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIR 809
EI++F PLS Q R+V + MKDVA RL+E+G+A+AVT +ALD VL +S+DP+YGARPIR
Sbjct: 600 EILIFRPLSKIQQRRVTKSMMKDVARRLSEKGIAMAVTKSALDFVLDQSFDPVYGARPIR 659
Query: 810 RWLEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLI 869
RWLEKKVVT +S+ML++EEI E TVY+DA+ G +L Y V+KN G +D + + ++LI
Sbjct: 660 RWLEKKVVTNISKMLMKEEIGEEYTVYVDANDDGKDLKYNVEKNNGLIDGISDGRYEILI 719
Query: 870 QIPN 873
QIP
Sbjct: 720 QIPT 723
>gi|386393795|ref|ZP_10078576.1| ATP-dependent chaperone ClpB [Desulfovibrio sp. U5L]
gi|385734673|gb|EIG54871.1| ATP-dependent chaperone ClpB [Desulfovibrio sp. U5L]
Length = 866
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/861 (53%), Positives = 616/861 (71%), Gaps = 27/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ +AI A +A G Q HL A L+ G+ + + AG
Sbjct: 1 MDLNKFTQKSQQAIGEAQAVAVRMGQQQVDAEHLLYAFLTQEQGLVPRILEKAGYAPDTY 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
AE +A+ KLP + +P ++ + L +++ +AQ K D +++V+ L L
Sbjct: 61 LAE--LERALGKLPRVSGPGSSPGQVYVTPRLNEMLVKAQDLAKHLKDEYVSVEHLFLAF 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
++ + G L K G+ RV + + ++RG G++V SA + T++AL YGRDLV+
Sbjct: 119 CDEPPSTMAGQLNKALGIDKNRVLAALSEIRG--GQRVTSADPEGTYEALAKYGRDLVDA 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRDEEIRRV+RILSRRTKNNPV+IGE GVGKTA+VEGLA RIV DVP
Sbjct: 177 AKKGKLDPVIGRDEEIRRVIRILSRRTKNNPVIIGEAGVGKTAIVEGLAMRIVNRDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG+++LFIDE+H ++GAG+TEG
Sbjct: 237 LKDKTIFALDMGALIAGAKYRGEFEERLKAVLKEVQSSEGRILLFIDELHTIVGAGKTEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V+V EP+V DT+SILR
Sbjct: 297 SMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVFVDEPTVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGVRI D A+V AA LSARYI+ R LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLRERFEVHHGVRISDSAIVEAAVLSARYISDRQLPDKAIDLIDEAAALIRTEIDSLPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK MQLEIE AL++E DKAS+ RL ++ +EL +L++ + ++++EK +D
Sbjct: 417 LDQINRKVMQLEIEREALKRETDKASRERLEKLEEELANLKEDQGGYLAQWEREKGAVDV 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLE--GNQSDENLMLT 529
+RR+K+ E+ A++EAER YDL RAA+LRYG + +E + GQ E G + M+
Sbjct: 477 LRRIKEDIEKTRQAIEEAERNYDLNRAAELRYGRLSALEKDLAGQEEAIGKAAGGARMIR 536
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSR 578
E VGPD +A V+SRWTGIPVTRL ++E+E R++G EAV AVA++VLR+R
Sbjct: 537 EEVGPDDVAMVISRWTGIPVTRLLESEREKLLRLGDLLHGRVVGQDEAVTAVADAVLRAR 596
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P++P GSF+FLGPTGVGKTEL K LA LFD E+ ++R+DMSEYME+H+V+RLIG
Sbjct: 597 AGLKDPRRPIGSFIFLGPTGVGKTELCKTLAAALFDTEDNMIRLDMSEYMERHTVARLIG 656
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGY+G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQ+LDDGRLTD GRTVD
Sbjct: 657 APPGYIGYDEGGQLTEAVRRKPYSVVLFDEIEKAHSDVFNTLLQILDDGRLTDSHGRTVD 716
Query: 699 FRNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NT+IIMTSNLGA+HLL G+ + + V+ +R HFRPE LNR+DEIV+F PL
Sbjct: 717 FKNTIIIMTSNLGAQHLLEGIDPSGAFLPGVTEAVMNTLRGHFRPEFLNRVDEIVLFKPL 776
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
Q+ + L + + RLA+R + L ++DAA + +YDP++GARP+RR+L+ V
Sbjct: 777 LRGQIAAIVELMLGGLRARLADRKIGLVLSDAAKAFIAETAYDPVFGARPLRRYLQAHVE 836
Query: 818 TELSRMLVREEIDENSTVYID 838
T L++ L+ + + TV +D
Sbjct: 837 TPLAKALIGGVVADGQTVTVD 857
>gi|240143695|ref|ZP_04742296.1| ATP-dependent chaperone protein ClpB [Roseburia intestinalis L1-82]
gi|257204320|gb|EEV02605.1| ATP-dependent chaperone protein ClpB [Roseburia intestinalis L1-82]
gi|291537365|emb|CBL10477.1| ATP-dependent chaperone ClpB [Roseburia intestinalis M50/1]
Length = 860
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/870 (52%), Positives = 618/870 (71%), Gaps = 29/870 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EAI +LA G+ + HL VALL G+ + I E
Sbjct: 1 MNIQKFTQKSVEAINDCEKLAYEYGNQEIEQEHLLVALLQQEDGLILKLI-----EKMEI 55
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
E + A K L ++ ++ L KV+ A+ K GD +++V+ L L LL+
Sbjct: 56 QKEHFLDNAKKHLAARVKVSGGQVYVGQDLNKVLIHAEDEAKQMGDEYVSVEHLFLALLK 115
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG- 176
+ + ++FKE G+ R + +RG + +V S + + T+ L+ YG D+V +A
Sbjct: 116 YPNKAMKEIFKEYGITRDRFLQALSTVRGNQ--RVVSDNPEATYDTLEKYGYDMVARAKE 173
Query: 177 -KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD+EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVP L D
Sbjct: 174 QKLDPVIGRDDEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPEGLKD 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L ALDMGALVAGAKYRGEFEERLKAVL +++ ++G++ILFIDE+H ++GAG+T+G+MD
Sbjct: 234 KKLFALDMGALVAGAKYRGEFEERLKAVLDDIKNSDGQIILFIDELHTIVGAGKTDGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A L KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRGLK
Sbjct: 294 AGQLLKPMLARGELHCIGATTLDEYREYIEKDAALERRFQPVMVDEPTVEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 ERYEVFHGVKITDSALVSAAVLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L R+ MQLEIE AL+KE D+ S+ RL +++KEL +LRD +++ EK+ ++++++
Sbjct: 414 LNRRVMQLEIEETALKKETDRLSQERLADLQKELAELRDTFNTKKAQWENEKKSVEKVQK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
L+++ E + ++ A++ YDL +AA+L+YG + ++E + E + +L L E V
Sbjct: 474 LREEIETVKNEIKTAQQNYDLEKAAELQYGKLPQLEKQLEAEEEEVKNRDLSLVHENVSE 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA ++SRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+
Sbjct: 534 EEIARIISRWTGIPVAKLTESERNKTLHLDEELHKRVIGQDEGVTKVTEAIIRSKAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAKALA LFDDE+ +VR+DMSEYME++SVSRLIGAPPGY
Sbjct: 594 PTKPIGSFLFLGPTGVGKTELAKALAASLFDDESNMVRLDMSEYMEKYSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 654 VGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
IIMTSNLG+ HLL G+ G + + + V+ E+R HFRPE LNRLDEI++F PL+
Sbjct: 714 IIMTSNLGSAHLLEGIDDNGDINPE-CEEAVMNELRGHFRPEFLNRLDEIIMFKPLTKGN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L + D+ RL++R + + +TDAA ++ YDP+YGARP++R+L+K V T +
Sbjct: 773 IGNIINLLITDLNKRLSDREITVELTDAAKQYIVDNGYDPVYGARPLKRFLQKHVETLSA 832
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
++++ +E+ E T+ ID +GD+L RV+
Sbjct: 833 KLILADEVREGDTILIDV--EGDHLTARVK 860
>gi|186684542|ref|YP_001867738.1| ATPase [Nostoc punctiforme PCC 73102]
gi|186466994|gb|ACC82795.1| ATPase AAA-2 domain protein [Nostoc punctiforme PCC 73102]
Length = 872
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/855 (51%), Positives = 617/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA ++ Q HL ALL A I G N +
Sbjct: 5 NPNQFTEKAWEAIAHTPDIVKQYQQQQIESEHLMKALLEQDG--LATGILTKAGVNLQKL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R Q ++ P + + +L ++ RA +K D +++++ L+L +D
Sbjct: 63 RDRT-EQFFQRQPKVSGTSSSVYLGRSLDTLLDRADVYRKEFQDEYISIEHLLLAYAKDD 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E G+ ++K ++++RG + KV + + ++AL+ YGRDL E A G+L
Sbjct: 122 RFGKALFQEFGLDEGKLKDIIKQVRGSQ--KVTDQNPEGKYEALEKYGRDLTEAARKGQL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR V+ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGDVPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAK+RGEFEERLKAVLKEV E+ G ++LFIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDMGALIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRK++EKDAA ERRFQQVYV +PSV D++SILRGL+E+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKHIEKDAALERRFQQVYVDQPSVEDSISILRGLRERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS+RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 ENHHGVKISDSALVAAAVLSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + KE+ DL+++ + L +++ EK+ ID+I+ +K+
Sbjct: 420 KILQLEMEKLSLQKESDAASRERLERLEKEIADLKEEQRTLNTQWQSEKDIIDKIQSVKK 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ E + +Q+AER YDL RAA+L+YG + +++EA +L Q +L E V
Sbjct: 480 EIERVNLEIQQAERDYDLNRAAELKYGNLTSLHRQLEAVEAELASAQRSGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L IG EAV AVA+++ RSRAGL
Sbjct: 540 ADIAEIISKWTGIPISKLVESEKEKLLHLEDELHHRVIGQEEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA +FD E+ LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFIFLGPTGVGKTELAKALAGYMFDSEDALVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN LQ+LDDGR+TD QG VDF+N +
Sbjct: 660 VGYEEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHKVDFKNAI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L R +V++ +R FRPE LNR+DEI++F L ++LR
Sbjct: 720 IIMTSNIGSQYILDVAGDNAHYDEMRRRVMEAMRNSFRPEFLNRIDEIIIFHGLDKKELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ LQ++ + RLA+R ++L ++DAALD + YDP+YGARP++R +++++ T++++
Sbjct: 780 QIVLLQVQRLRQRLADRKISLKLSDAALDFLAEVGYDPVYGARPLKRAIQRELETQIAKA 839
Query: 824 LVREEIDENSTVYID 838
++R E + +T+++D
Sbjct: 840 ILRGEFTDGNTIFVD 854
>gi|116619644|ref|YP_821800.1| ATPase [Candidatus Solibacter usitatus Ellin6076]
gi|116222806|gb|ABJ81515.1| ATPase AAA-2 domain protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 869
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/872 (53%), Positives = 620/872 (71%), Gaps = 31/872 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++FT K EA+ A +A GH Q HL ALL G+ A + AG
Sbjct: 1 MDFNRFTEKLQEAVRAAQSIAARHGHQQVDVEHLLAALLEQEGGLTASILTRAGVN--VD 58
Query: 61 SAERVFNQAMKKLPSQTPAP---DEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ +R + +LP + + D+I + L K++ +A+ K D +++V+ ++L
Sbjct: 59 ALKRRIEGELDRLPKVSGSAAGIDQIYVTPRLNKLLTQAEDEAKKLKDEYVSVEHVLLAA 118
Query: 118 LEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG- 176
++ K+ GV R+ + ++RG + +V S + + T++AL+ YGRDL A
Sbjct: 119 VD-------MKDLGVPRDRLLQALREVRGSQ--RVTSQNPEGTYEALEKYGRDLTVAAAT 169
Query: 177 -KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD+EIRRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIVRGDVP L +
Sbjct: 170 NKLDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAVRIVRGDVPEGLKN 229
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
R++ALDMGAL+AGAKYRGEFEERLKAVLKEV +A G++ILFIDE+H V+GAG+TEGSMD
Sbjct: 230 KRVVALDMGALIAGAKYRGEFEERLKAVLKEVLDAAGEIILFIDELHTVVGAGKTEGSMD 289
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+L CIGATTL+EYRKY+EKDAA RRFQ V V +PSV DT+SILRGLK
Sbjct: 290 AGNLLKPMLARGELHCIGATTLDEYRKYIEKDAALARRFQPVMVDQPSVEDTISILRGLK 349
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI+D ALV AA LS RYIT R LPDKAIDLVDE+ A +R ++DS P E+D
Sbjct: 350 ERYEVHHGVRIKDAALVAAAVLSDRYITDRFLPDKAIDLVDESAARLRTEIDSMPVELDE 409
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
R+ MQLEIE AL KEKDKASK RL ++ KEL DL+ + LM R++ EK+ + +R
Sbjct: 410 TRRRIMQLEIEREALRKEKDKASKERLTKLEKELADLKAESDELMARWQAEKDEVQRLRT 469
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLMLTETVG 533
L+++ E+ + +AER+YDL RAA+L+YG + ++E + + E Q ++ E V
Sbjct: 470 LREQVEQTKLEIGQAERQYDLNRAAELKYGKLAQLERQLAEAEKASKQQGGPRLIKEEVD 529
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
+ IA VVSRWTG+PVT+L + E + R+IG EAV AVAE+V+R+R+GL
Sbjct: 530 EEDIAAVVSRWTGVPVTKLLEGEMQKLLHLEEELHKRVIGQDEAVTAVAEAVIRARSGLK 589
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
PQ+P GSF+F+GPTGVGKTELA+ALAE +FDDE+ ++RIDMSEY E+H+VSRL+GAPPG
Sbjct: 590 DPQRPIGSFIFMGPTGVGKTELARALAEYMFDDEHAMIRIDMSEYQEKHTVSRLVGAPPG 649
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT
Sbjct: 650 YVGYDEGGQLTEAVRRRPYSVILFDEIEKAHHDVFNVLLQVLDDGRLTDGQGRTVDFKNT 709
Query: 703 VIIMTSNLGAEHLL--SGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
++IMTSN+G+ +L G + ++ VL+E+R+ FRPE LNR+DEI+VF LS E
Sbjct: 710 IVIMTSNVGSARILEYQGAYSGAGFERMKEAVLEEMRRQFRPEFLNRVDEIIVFHALSEE 769
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
L+K+ +Q+ + RLA+R + L +TDAA ++ YDP YGARP++R ++KK+ T L
Sbjct: 770 DLKKIVEIQLGRLRARLADRHITLELTDAARANLVHTGYDPHYGARPLKRAIQKKIETPL 829
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYRVQK 852
R L++ I + V +DA+ +L + V++
Sbjct: 830 GRQLIQGAIRDGQVVKVDATGDSGDLSFTVEQ 861
>gi|365885016|ref|ZP_09424039.1| Chaperone [Bradyrhizobium sp. ORS 375]
gi|365286359|emb|CCD96570.1| Chaperone [Bradyrhizobium sp. ORS 375]
Length = 879
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/864 (53%), Positives = 610/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK+T + I A LA GH QF+PLHL LL D G+ I+ AGG + A
Sbjct: 1 MNIDKYTERARGFIQSAQSLAVRDGHQQFSPLHLLKVLLDDGEGLAGGLIDRAGGNSRA- 59
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ A+ KLP + ++ S+ L + A+ A + GD+ + V++L+LGL+
Sbjct: 60 -ILKATEDALGKLPKVSGSGAGQVYLSSELARAFDAAEKAAEKAGDSFVTVERLLLGLVL 118
Query: 120 D--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D S+ G + + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 DAKSETGSILAKGGVTAQNLNAAIESLR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
RL++LD+GAL+AGAKYRGEFEERLKAVL+EV AEG +LFIDE+H ++GAG+ +G+MD
Sbjct: 237 KRLLSLDLGALIAGAKYRGEFEERLKAVLQEVTAAEGTFVLFIDEMHTLIGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EY+K+VEKDAA RRFQ VYV EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPVYVTEPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV +A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ ++L+IE AL+KE D SK RL + KEL DL +K L ++ EK+++ ++
Sbjct: 417 LDREIIRLKIEQEALKKESDLGSKTRLQALEKELADLEEKSASLTAKWSAEKDKLSNAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + +A +L YG I E+E + +E + + M+ E V +
Sbjct: 477 LKSELDALRIELANAQRRGEYQKAGELAYGRIPELEKRLADIEAKE-NAGEMMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EK++L +G EAV+AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKDKLLRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T +V R+ V+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSEFLVNQPEGEDTSEV-RELVMGTVRSHFRPEFLNRVDEIILFHRLQKSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L ER + L++ A D + A+ +DP YGARP++R +++ V L+ M+
Sbjct: 775 IVEIQFSRLQKLLEERKITLSLDGDARDWLAAKGWDPAYGARPLKRVIQRSVQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ +I + V I S +G+ L +
Sbjct: 835 LAGDIKDGDKVAI--SSEGNVLTF 856
>gi|440682733|ref|YP_007157528.1| ATP-dependent chaperone ClpB [Anabaena cylindrica PCC 7122]
gi|428679852|gb|AFZ58618.1| ATP-dependent chaperone ClpB [Anabaena cylindrica PCC 7122]
Length = 872
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/855 (51%), Positives = 620/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA ++A Q HL ALL A AI G N +
Sbjct: 5 NPNQFTEKAWEAIAHTPDVAKQYQQQQLESEHLMKALLEQDG--LASAIFTKAGANLVKV 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R +Q + + P + + + +L ++ RA+ ++ D +++V+ ++LG +D
Sbjct: 63 RDRT-DQFILRQPKVSGSSSSVYLGRSLDTLLDRAEKYRQEFKDEYISVEHILLGYAKDD 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G L +E G+ ++K+ ++++RG + KV S + +Q+L+ YGRDL + A G+L
Sbjct: 122 RFGKALCQEFGLDENKLKNIIKQIRGSQ--KVTDQSPEGKYQSLEKYGRDLTDAARKGQL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRTL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAK+RGEFEERLKAVLKEV ++ G ++LFIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDMGALIAGAKFRGEFEERLKAVLKEVTDSGGNIVLFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRK++EKDAA ERRFQQVYV +PSV DTVSILRGL+E+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKHIEKDAALERRFQQVYVDQPSVEDTVSILRGLRERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS+RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 ENHHGVKISDSALVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + KE+ D +++ + L +++ EK+ ID+I+ +K+
Sbjct: 420 KILQLEMERLSLKKESDAASRERLERLEKEIADFKEEQRTLSTQWQSEKDIIDKIQSVKK 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ E++ +Q+AER YDL RAA+L+YG + +++E +L Q +L E V
Sbjct: 480 EIEKVNLEIQQAERDYDLNRAAELKYGTLTNLHRQLEDVENELTNTQGTGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE R++G AEAV AVA+++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEKEKLLHLEDELHHRVVGQAEAVTAVADAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA +FD E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFIFLGPTGVGKTELAKALAAYMFDTEESLVRIDMSEYMEKHTVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QGRT+DF+N +
Sbjct: 660 VGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGRTIDFKNCI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L R +V++ +R FRPE LNR+DE ++F L +LR
Sbjct: 720 IIMTSNIGSQYILDVAGDDSRYDEMRHRVMEAMRGSFRPEFLNRVDEFIIFHSLQKSELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ+ + RL++R ++L ++D ALD + YDP++GARP++R +++++ T++++
Sbjct: 780 QIVQLQVDRLRQRLSDRKMSLRLSDYALDFLAEVGYDPVFGARPLKRAIQRELETQIAKA 839
Query: 824 LVREEIDENSTVYID 838
++R E ++ T+++D
Sbjct: 840 ILRGEFNDGDTIFVD 854
>gi|291539905|emb|CBL13016.1| ATP-dependent chaperone ClpB [Roseburia intestinalis XB6B4]
Length = 860
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/870 (52%), Positives = 618/870 (71%), Gaps = 29/870 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EAI +LA G+ + HL VALL G+ + I E
Sbjct: 1 MNIQKFTQKSVEAINDCEKLAYEYGNQEIEQEHLLVALLQQEDGLILKLI-----EKMEI 55
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
E + A K L ++ ++ L KV+ A+ K GD +++V+ L L LL+
Sbjct: 56 QKEHFLDNAKKHLAARVKVSGGQVYVGQDLNKVLIHAEDEAKQMGDEYVSVEHLFLALLK 115
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG- 176
+ + ++FKE G+ R + +RG + +V S + + T+ L+ YG D+V +A
Sbjct: 116 YPNKAMKEIFKEYGITRDRFLQALSTVRGNQ--RVVSDNPEATYDTLEKYGYDMVARAKE 173
Query: 177 -KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD+EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVP L D
Sbjct: 174 QKLDPVIGRDDEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPEGLKD 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L ALDMGALVAGAKYRGEFEERLKAVL +++ ++G++ILFIDE+H ++GAG+T+G+MD
Sbjct: 234 KKLFALDMGALVAGAKYRGEFEERLKAVLDDIKNSDGQIILFIDELHTIVGAGKTDGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A L KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRGLK
Sbjct: 294 AGQLLKPMLARGELHCIGATTLDEYREYIEKDAALERRFQPVMVDEPTVEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 ERYEVFHGVKITDSALVSAAVLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L R+ MQLEIE AL+KE D+ S+ RL +++KEL +LRD +++ EK+ ++++++
Sbjct: 414 LNRRVMQLEIEETALKKETDRLSQERLADLQKELAELRDTFNTKKAQWENEKKSVEKVQK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
L+++ E + ++ A++ YDL +AA+L+YG + ++E + E + +L L E V
Sbjct: 474 LREEIETVKNEIKTAQQNYDLEKAAELQYGKLPQLEKQLEAEEEEVKNRDLSLVHENVSE 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA ++SRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+
Sbjct: 534 EEIARIISRWTGIPVAKLTESERNKTLHLDEELHKRVIGQDEGVTKVTEAIIRSKAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAKALA LFDDE+ +VR+DMSEYME++SVSRLIGAPPGY
Sbjct: 594 PTKPIGSFLFLGPTGVGKTELAKALAASLFDDESNMVRLDMSEYMEKYSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 654 VGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
IIMTSNLG+ HLL G+ G + + + V+ E+R HFRPE LNRLDEI++F PL+
Sbjct: 714 IIMTSNLGSAHLLEGIDDNGDINPE-CEEAVMNELRGHFRPEFLNRLDEIIMFKPLTKGN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L + D+ RL++R + + +TDAA ++ YDP+YGARP++R+L+K V T +
Sbjct: 773 IGNIINLLIADLNKRLSDREITVELTDAAKQYIVDNGYDPVYGARPLKRFLQKHVETLSA 832
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
++++ +E+ E T+ ID +GD+L RV+
Sbjct: 833 KLILADEVREGDTILIDV--EGDHLTARVK 860
>gi|170078948|ref|YP_001735586.1| endopeptidase Clp ATP-binding subunit B1 [Synechococcus sp. PCC
7002]
gi|169886617|gb|ACB00331.1| endopeptidase Clp ATP-binding chain B1 [Synechococcus sp. PCC 7002]
Length = 864
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/873 (51%), Positives = 621/873 (71%), Gaps = 37/873 (4%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSD---PSGIFAQA---INNAGG 55
NP++FT K +AIA ++A Q HL ALL IF +A ++
Sbjct: 5 NPNQFTEKAWQAIAQTPDIAKQNQQQQIESEHLLQALLEQDGLAKSIFTKAEIPLSTLRD 64
Query: 56 ENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
A A++ P + + + +L ++ RA +K+ GD ++V+ LIL
Sbjct: 65 RTATFIAQQ---------PKISQPSESVYLGRSLDLLLDRADQHRKSFGDDFISVEHLIL 115
Query: 116 GLLEDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
+D + G +L+KE + ++K+ + ++RG + KV + + +++L+ YGRDL
Sbjct: 116 SYAKDDRFGKNLYKEFDLTENKLKTIITQIRGNQ--KVTDQNPEGKYESLEKYGRDLTSL 173
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV DVP +
Sbjct: 174 ARNGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNRDVPES 233
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D LIALDMG+L+AGAKYRGEFEERLKAVLKEV ++EG++ILFIDEIH V+GAG T+G
Sbjct: 234 LKDRTLIALDMGSLIAGAKYRGEFEERLKAVLKEVTDSEGQIILFIDEIHTVVGAGATQG 293
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ V V EP+V DT+SILR
Sbjct: 294 AMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQSVMVNEPNVVDTISILR 353
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE+YE HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE
Sbjct: 354 GLKERYEVHHGVKIADTALVAAAMLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEE 413
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D ++RK +QLE+E +++KEKD+ S RL ++ KEL + +++ L +++ EKE ID+
Sbjct: 414 LDEIDRKILQLEMEKLSIQKEKDEVSLERLAKLEKELANFKEEQSQLNAQWQSEKEFIDK 473
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL----ML 528
IR LK++ ++ +Q+AER YDL +AA+LRYG + E++ I +E N + + + +L
Sbjct: 474 IRFLKEEIDKTNLEIQQAERNYDLNKAAELRYGKLTELQQKIKDIESNLAAQQVTGESLL 533
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRS 577
E V IAE++S+WTGIP+++L ++EKE+L +G EAV AVAE++ RS
Sbjct: 534 REEVIESDIAEIISKWTGIPISKLIESEKEKLLHLEAELHRRVVGQEEAVTAVAEAIQRS 593
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGL P +PT SF+FLGPTGVGKTELAKALA+ LFD E LVRIDMSEYME+H+VSRL+
Sbjct: 594 RAGLADPNRPTASFIFLGPTGVGKTELAKALAQFLFDTEEALVRIDMSEYMEKHAVSRLM 653
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QGRTV
Sbjct: 654 GAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHADVFNVMLQILDDGRLTDSQGRTV 713
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+NTVIIMTSN+G++ +L + R++V++ + +FRPE LNR+DE+++F L
Sbjct: 714 DFKNTVIIMTSNIGSQFILDIAGDDARYEEMRNRVMEAMNANFRPEFLNRIDELIIFHGL 773
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+QLR + +LQ+ +A RLAE+ +++ +T A D + Y+P+YGARP++R ++K V
Sbjct: 774 QKDQLRSIVQLQVNRLAERLAEQKISIQLTPEAYDFIAEVGYNPVYGARPLKRAVQKYVE 833
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRV 850
T +++ +++ E S + +D K + L +R+
Sbjct: 834 TAIAKGILKGEFKAGSAITVDV--KDERLTFRI 864
>gi|220925227|ref|YP_002500529.1| ATP-dependent chaperone ClpB [Methylobacterium nodulans ORS 2060]
gi|219949834|gb|ACL60226.1| ATP-dependent chaperone ClpB [Methylobacterium nodulans ORS 2060]
Length = 878
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/863 (53%), Positives = 603/863 (69%), Gaps = 25/863 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + + A LA GH Q P H+ LL DP G+ A I+ AGG++
Sbjct: 1 MNFEKYTERARGFVQAAQALALREGHPQLAPGHVLKVLLDDPEGLCAGLIDRAGGQSRVA 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A+ + K P + A + A+ L+++ A+ A + GD+++ V++L+L L
Sbjct: 61 LAQ--IEAWLAKQPKVSGAAAQPQATRDLMRLFDTAEKAAEKAGDSYVTVERLLLALAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+DS+ G AGV A + + + LR +GR ++A+ + + ALK Y RDL E A G
Sbjct: 119 KDSEAGKALSAAGVTAASLNAAINALR--KGRTADNATAENAYDALKKYARDLTEDAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
+LDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 RLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLRDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL+ALDMGAL+AGAKYRGEFEERLK VL EV AEG +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 RLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGGIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EPSV DTVSILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPSVEDTVSILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+DN+
Sbjct: 357 KYEQHHGVRIQDAALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDNI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ ++L+IE AL+KE D AS+ RL + KEL DL ++ + R+K EK+++ L
Sbjct: 417 DREIVRLKIEAEALKKETDAASRDRLTRLEKELGDLEEQSSAITARWKAEKDKLGRAAEL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE-----GNQSDENLMLTET 531
K+K +E L A+R+ RA +L YG I +E + ++E G + + + ++ E
Sbjct: 477 KKKLDEARTELASAQRQGQYQRAGELAYGIIPGLERELAEIEARSADGTRGNGSGLMEEA 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
V P+ +A VVSRWTG+PV ++ + E+E R++G EAV AVA +V R+RAG
Sbjct: 537 VTPNHVASVVSRWTGVPVDKMLEGEREKLLAMEEALSKRVVGQREAVEAVATAVRRARAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P GSF+FLGPTGVGKTEL KALA LFDDE +VR+DMSEYME+HSV+RLIGAP
Sbjct: 597 LQDPNRPIGSFMFLGPTGVGKTELTKALANFLFDDETAMVRLDMSEYMEKHSVARLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFR
Sbjct: 657 PGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+++MTSNLGAE+L++ G+ T V RD+V+ VR HFRPE LNR+DEI++F L
Sbjct: 717 NTLLVMTSNLGAEYLVTQPEGQDTDAV-RDEVMAVVRGHFRPEFLNRVDEIILFHRLKRA 775
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++ + +Q+ + L ER + L V A + YDP YGARP++R ++K V L
Sbjct: 776 EMGAIVDIQLGRLQKLLDERKITLEVEPDARAWLAERGYDPAYGARPLKRVIQKAVQDPL 835
Query: 821 SRMLVREEIDENSTVYIDASPKG 843
+ L+ I + TV + P+G
Sbjct: 836 AEQLLAGAIHDGETVPVRHGPEG 858
>gi|170751814|ref|YP_001758074.1| ATP-dependent chaperone ClpB [Methylobacterium radiotolerans JCM
2831]
gi|170658336|gb|ACB27391.1| ATP-dependent chaperone ClpB [Methylobacterium radiotolerans JCM
2831]
Length = 874
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/859 (53%), Positives = 607/859 (70%), Gaps = 21/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + + A LA GH Q P HL LL DP G+ A I+ AGG++
Sbjct: 1 MNFEKYTERARGFVQAAQNLAMREGHPQLQPGHLLKVLLDDPEGLCAGLIDRAGGQSRVA 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A+ Q + K P + A+ L+++ A+ A + GD+++ V++L+L L
Sbjct: 61 LAQT--EQWLAKQPKVSGNAAAPQATRELMRLFDTAEKAAEKAGDSYVTVERLLLALAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+DS+ G + AGV A + + + LR +GR ++AS + + ALK Y RDL E A G
Sbjct: 119 KDSEAGRALQAAGVTPASLNAAINALR--KGRTADNASAENAYDALKKYARDLTEAARDG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLRDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
L+ALDMGAL+AGAKYRGEFEERLK VL EV AEG +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 SLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGGIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+DN+
Sbjct: 357 KYEQHHGVRIQDSALVAAATLSNRYITDRFLPDKAIDLVDEAGSRLRMQVDSKPEELDNI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ ++L+IE AL+KE D AS+ RLV + KEL DL ++ + R+K EK+++ L
Sbjct: 417 DREIVRLKIEAEALKKETDSASRDRLVRLEKELGDLEERSAAITARWKAEKDKLGTAAGL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVGPD 535
K+K +E L A+R+ RA +L YG I +E + ++E ++ + M+ E V P
Sbjct: 477 KKKLDEARNDLAAAQRQGQYQRAGELAYGVIPGLEKQLAEIEAKAENGRDAMMEEAVTPA 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRP 584
+A VVSRWTG+PV ++ + E+E R++G EAV AV+ +V R+RAGL P
Sbjct: 537 HVAGVVSRWTGVPVDKMLEGEREKLLAMEEALSKRVVGQREAVEAVSTAVRRARAGLQDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALA LFDD+ LVRIDMSEYME+H+V+RLIGAPPGYV
Sbjct: 597 NRPIGSFMFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVARLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT++
Sbjct: 657 GYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLL 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLGAE+L++ G+ T V RD+V+ VR HFRPE LNR+DEI++F L+ ++
Sbjct: 717 IMTSNLGAEYLVNQPAGQDTDAV-RDEVMGVVRGHFRPEFLNRVDEIILFHRLARSEMGA 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+ + L +R +AL V + A + + + YDP YGARP++R ++K V L+ ++
Sbjct: 776 IVEIQLGRLQKLLDDRKIALDVDEDAKNWLADKGYDPAYGARPLKRVIQKNVQDPLAELV 835
Query: 825 VREEIDENSTVYIDASPKG 843
+ ++ + TV + P G
Sbjct: 836 LSGKVHDGETVPVRLGPMG 854
>gi|242279044|ref|YP_002991173.1| ATPase AAA [Desulfovibrio salexigens DSM 2638]
gi|242121938|gb|ACS79634.1| ATP-dependent chaperone ClpB [Desulfovibrio salexigens DSM 2638]
Length = 873
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/871 (52%), Positives = 609/871 (69%), Gaps = 32/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+KFT KTN+AIA A LA G Q HL +AL+ GI ++ + + A
Sbjct: 1 MDPNKFTQKTNDAIAAAQSLAVKNGQQQIEVEHLLLALIEQEKGIVSKILEKSSINPA-- 58
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
++ ++KLP + P ++ + L ++I ++ + D ++V+ L L +
Sbjct: 59 DYKKAVEDEIRKLPRVSGPGAQPGQVFVTQRLNRIIVASEEIAQRMQDEFISVEHLFLAI 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
+++ + G + K G+ +V + +RG + +V + + + T+ ALK YGRDLVE+
Sbjct: 119 MDEHGSTGAGKVNKTFGLTKDKVLEAMTSIRGNQ--RVTTDNPEATYDALKKYGRDLVEE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRRV+RILSRRTKNNP+LIGE GVGKTA++EGLAQRIV+ DVP
Sbjct: 177 ARKGKLDPVIGRDSEIRRVIRILSRRTKNNPILIGEAGVGKTAIIEGLAQRIVKQDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + LDMGAL+AGAKYRGEFEERLKAVLKEV+E+EG++I+FIDEIH ++GAG+T+G
Sbjct: 237 LKDKTVFMLDMGALIAGAKYRGEFEERLKAVLKEVQESEGQIIIFIDEIHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATT +EYRKY+EKD A ERRFQ + V EP++ DT+SILR
Sbjct: 297 AMDAGNLLKPMLARGELHCIGATTTDEYRKYIEKDPALERRFQTILVEEPTIEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHGVRI D ALV AA LSARYIT R LPDKAIDL+DEA A +R ++DSQP E
Sbjct: 357 GLKERFEVHHGVRISDSALVEAASLSARYITDRQLPDKAIDLIDEAAAMIRTEIDSQPYE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQ EIE AL KE D AS+ RL ++ L +++ K L+ +++KEK ID
Sbjct: 417 LDKVNRQIMQAEIEREALRKEDDAASRERLSKLEDSLTEMKIKQSELVEQWEKEKGSIDT 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--------QSDE 524
+R LK + E+ ++EA+R+ DL RA++L Y + +E+ + + + +D
Sbjct: 477 VRDLKAQIEKTRIDIEEAQRKGDLGRASELTYSVLPGLESQLAAISNDIEGEDDKVTADS 536
Query: 525 NLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAES 573
+L E VGPD IA ++SRWTGIPV+RL + E+E+L IG +AV AV+E+
Sbjct: 537 KRLLKEFVGPDDIAGIISRWTGIPVSRLVEGEREKLLRLEEILHDRVIGQDDAVRAVSEA 596
Query: 574 VLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV 633
VLR+RAGL P +P GSF+FLGPTGVGKTEL KALAE LFD E +VR+DMSEYME+H+V
Sbjct: 597 VLRARAGLKDPSRPIGSFIFLGPTGVGKTELCKALAEALFDSEENIVRMDMSEYMEKHAV 656
Query: 634 SRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQ 693
+RLIGAPPGY+G++EGGQLTEA+RR+PYSVVLFDE+EKAH VFN LLQ+LDDGR+TD Q
Sbjct: 657 ARLIGAPPGYIGYDEGGQLTEAIRRKPYSVVLFDEIEKAHSDVFNVLLQILDDGRITDSQ 716
Query: 694 GRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVA-RDQVLQEVRKHFRPELLNRLDEIV 752
GRTVD +NT+IIMTSNLG++ +L G+ + +D V+ +R HFRPE LNR+DE V
Sbjct: 717 GRTVDCKNTIIIMTSNLGSQLMLEGIEANGEFKNGVQDGVINVLRGHFRPEFLNRVDETV 776
Query: 753 VFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWL 812
+F PL + L K+ LQ+ + RL E+ +++ VTD A + SYDPIYGARP+RR+L
Sbjct: 777 LFKPLLEKDLVKIVDLQLAGLRARLEEQKMSMEVTDKAKAFIAHASYDPIYGARPLRRYL 836
Query: 813 EKKVVTELSRMLVREEIDENSTVYIDASPKG 843
+ V T L++ ++ E+ E V IDA G
Sbjct: 837 QSHVETPLAKKIIGGELREEHVVNIDAGDDG 867
>gi|212639968|ref|YP_002316488.1| Class III stress response-related ATPase [Anoxybacillus
flavithermus WK1]
gi|212561448|gb|ACJ34503.1| Class III stress response-related ATPase [Anoxybacillus
flavithermus WK1]
Length = 860
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/866 (52%), Positives = 618/866 (71%), Gaps = 25/866 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ + T K EA A LA H + H+ VALL G+ + ++
Sbjct: 1 MHMQQMTEKVQEAFMRAQSLAIEKQHQEVDVEHVCVALLEQEDGLARRIYEKMSVSVSSL 60
Query: 61 SAERVFNQAMKKLPSQTPAPD--EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
E +N+ + K P + + +I + L + + RA+ K D +++V+ L+L L+
Sbjct: 61 LDE--WNKQLNKKPQVISSSEAGKIYVTNRLQQWLVRAEQEAKQMKDEYVSVEHLLLTLV 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AG 176
+D + + GV +++ + ++RG + +V S + + T++AL+ YGRDLV + AG
Sbjct: 119 DDKEAKQILSRYGVDRKKLQQTIMEIRGNQ--RVVSPNPEATYEALQKYGRDLVAEVKAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L D
Sbjct: 177 KIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ ALDM AL+AGAK+RGEFEERLKAVL E++++EG++ILFIDE+H ++GAGR +G++DA
Sbjct: 237 TIFALDMSALIAGAKFRGEFEERLKAVLHEIKKSEGRIILFIDELHTIVGAGRADGALDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQQV V EP+V DT+SILRGLKE
Sbjct: 297 GNMLKPMLARGELHCIGATTLDEYRQYIEKDPALERRFQQVLVEEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
++E HHGV I D ALV AA LS RYI+ R LPDKAIDLVDEACA +R ++DS P E+D +
Sbjct: 357 RFEIHHGVNIHDGALVAAATLSDRYISDRFLPDKAIDLVDEACAMIRTEIDSMPTELDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK MQLEIE AL+KE+D+ASK RL + +EL +LR+K + +++KEKE I +R L
Sbjct: 417 MRKMMQLEIEEAALKKEQDEASKQRLQALSQELANLREKANAMKAQWEKEKEAIQHVRTL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
+++ E L+EAE YDL +AA+LR+G I ++E + QLE ++ + L L E V ++
Sbjct: 477 REQLERAKRELEEAENNYDLNKAAELRHGRIPQLEKQLKQLEQSEKERRL-LREEVTEEE 535
Query: 537 IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGRPQ 585
IA +VS+WTGIPVT+L G+ EK ER+IG EAV V+++VLR+RAG+ P
Sbjct: 536 IATIVSKWTGIPVTKLVEGEREKLLRLSHILHERVIGQDEAVELVSDAVLRARAGMKDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSFLFLGPTGVGKTELAKALAE LFD E ++RIDMSEYME+H+VSRLIGAPPGYVG
Sbjct: 596 RPIGSFLFLGPTGVGKTELAKALAEALFDSEQQMIRIDMSEYMEKHAVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVDF+NTV+I
Sbjct: 656 YEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRMTDSQGRTVDFKNTVVI 715
Query: 706 MTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
MTSN+G+ LL + G+V + AR+QVL+++R HFRPE LNR+D+IV+F PL+ +++
Sbjct: 716 MTSNIGSHTLLEAVDAHGEVNEE-AREQVLKQLRAHFRPEFLNRIDDIVLFKPLTVREVK 774
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +K + RLAER + + +TD A + +D +YGARP++R+++K + T+L+R
Sbjct: 775 GIVEKFIKQLEKRLAERHITVTLTDEAKTYIATHGFDHVYGARPLKRFIQKHIETKLARE 834
Query: 824 LVREEIDENSTVYIDASPKGDNLVYR 849
+V I + V ID +GD LV +
Sbjct: 835 IVAGHIGDYHAVTIDV--EGDQLVVK 858
>gi|414172088|ref|ZP_11426999.1| chaperone ClpB [Afipia broomeae ATCC 49717]
gi|410893763|gb|EKS41553.1| chaperone ClpB [Afipia broomeae ATCC 49717]
Length = 879
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/864 (53%), Positives = 607/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A LA GH QF+PLHL LL D G+ I+ AGG ++
Sbjct: 1 MNIEKYTERARGFIQSAQSLAMRDGHQQFSPLHLLKVLLDDSEGLAGSLIDRAGGN--SR 58
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ + A+ KLP + ++ + L + A+ A + GD+ + V++L+LGL
Sbjct: 59 AILKATEDALNKLPKVSGGGAGQVYLAPELARAFDAAEKAAEKAGDSFVTVERLLLGLAM 118
Query: 120 DS--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D+ + G + + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 DTNGEAGAILSKGGVTAQNLNAAIEALR--KGRTADSATAENAYDALKKYARDLTQAAHD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNP+LIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPLLIGEPGVGKTAIVEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LDMGAL+AGAKYRGEFEERLKAVL+EV AEG +ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLSLDMGALIAGAKYRGEFEERLKAVLQEVTSAEGGIILFIDEMHTLIGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EY+K+VEKD A RRFQ +YV EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYQKHVEKDPALARRFQPIYVGEPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D
Sbjct: 357 DKYEQHHGVRITDSALVAATTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDL 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R ++L+IE AL+KE D SK+RL + KEL DL +K L R+ KEK ++ + +
Sbjct: 417 LDRDIIRLKIEQEALKKESDPGSKSRLQALEKELADLEEKSAALTARWSKEKNKLSDAAK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + RA +L YG I E+E + +E N++ M+ E V +
Sbjct: 477 LKSELDALRIELANAQRRGEFQRAGELAYGRIPELEKKLASIEENEAPGE-MMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EK++L +G AEAV AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKDKLLKMEEALGKRVVGQAEAVRAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPIGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T V R+QV+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSEFLVNQPEGEDTSAV-REQVMGLVRAHFRPEFLNRIDEIILFHRLQKSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L ER +AL + AA D + + +DP YGARP++R +++ V L+ M+
Sbjct: 775 IVEIQFTRLQKLLEERKIALTLDAAARDWLADKGWDPAYGARPLKRVIQRSVQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ E+ + V I S G+ L +
Sbjct: 835 LAGEVSDGDKVKI--SVNGNVLTF 856
>gi|15894246|ref|NP_347595.1| ABC transporter ATPase [Clostridium acetobutylicum ATCC 824]
gi|337736176|ref|YP_004635623.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
gi|384457685|ref|YP_005670105.1| ATPase with chaperone activity, two ATP-binding domains
[Clostridium acetobutylicum EA 2018]
gi|54035886|sp|Q97KG0.1|CLPB_CLOAB RecName: Full=Chaperone protein ClpB
gi|15023863|gb|AAK78935.1|AE007611_3 ATPase with chaperone activity, two ATP-binding domains
[Clostridium acetobutylicum ATCC 824]
gi|325508374|gb|ADZ20010.1| ATPase with chaperone activity, two ATP-binding domains
[Clostridium acetobutylicum EA 2018]
gi|336293591|gb|AEI34725.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
Length = 865
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/859 (50%), Positives = 609/859 (70%), Gaps = 22/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
M+ DK T K +AI +A H Q +HL +A++S G+ + G E
Sbjct: 1 MDVDKLTLKVQQAINDCQTIAVRYNHQQIDTIHLFMAIISQEDGLIPNILGKMGADVETV 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ E ++ M K+ + I A+ +V R + + D +++V+ ++L L+
Sbjct: 61 KRDTEAELDR-MPKVLGEGAQNASIYATRRFEEVFVRGEKISRDFKDLYISVEHVMLALM 119
Query: 119 E-DS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ DS I + + ++ + ++RG + +V+++ + T+ AL YGRDLV+ A
Sbjct: 120 DIDSGAIKSILDKNNISKKEFLKALREVRGNQ--RVDTSDPEGTYDALNKYGRDLVKDAK 177
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRRV+RILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP L
Sbjct: 178 KHKLDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLK 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMG+LVAGAKYRGEFEERLKAVLKEVE +EGK+ILFIDEIH ++GAG+TEG+M
Sbjct: 238 NKIIFSLDMGSLVAGAKYRGEFEERLKAVLKEVERSEGKIILFIDEIHTIVGAGKTEGAM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATT +EYRKY+EKD A ERRFQ+V + EP+V D +SILRGL
Sbjct: 298 DAGNIIKPMLARGELHCIGATTFDEYRKYIEKDKALERRFQKVQIDEPTVDDAISILRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGVRI D A+V AA+LS RYITGR LPDKAIDL+DEA A VR+++DS P E+D
Sbjct: 358 KERFEIHHGVRIHDNAIVAAAKLSDRYITGRFLPDKAIDLIDEAGAMVRMEIDSMPTELD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L+RK Q+EIE AL KE DK S+ RL ++KEL DL+DK + + +Y KEK +I I+
Sbjct: 418 MLKRKIFQMEIEKEALSKESDKFSRERLESIQKELSDLKDKDKAMTAKYDKEKAQIQGIK 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG--NQSDENLMLTETV 532
LK K +E+ +++AER YDL +AA+L+YG + ++E I + E Q+ +N ML E V
Sbjct: 478 ELKTKLDEIRGQIEKAEREYDLNKAAELKYGEVPKLEHEIEEKENLIKQNGQNAMLKEEV 537
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
+Q++ +VS+WTGIPV++L + E+ +R++G EAV +VA++V+R+RAGL
Sbjct: 538 TEEQVSNIVSKWTGIPVSKLVEGERNKLMRLSDELEKRVVGQTEAVKSVADAVIRARAGL 597
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
+P GSF+FLGPTGVGKTELAK LA +FD E+ ++RIDMSEYME++SVSRLIG+PP
Sbjct: 598 KDMSKPIGSFIFLGPTGVGKTELAKTLARVMFDSEDNIIRIDMSEYMEKYSVSRLIGSPP 657
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+ DDGRLTD +G T+DF+N
Sbjct: 658 GYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHSDVFNIFLQIFDDGRLTDNKGNTIDFKN 717
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
++IIMTSN+G+EHLL+ + +D+V+ E++ F+PE LNRLD+I++F PLS +
Sbjct: 718 SIIIMTSNIGSEHLLNNKGVSNVDEETKDKVMNELKGRFKPEFLNRLDDIIMFKPLSINE 777
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ + ++++ +L E+ + + + + A I+ E YDP+YGARP++R++E + T ++
Sbjct: 778 IGKIIDIFLENIKSKLKEKNIKIDIAEEAKKIIAEEGYDPVYGARPLKRYIENTIETHIA 837
Query: 822 RMLVREEIDENSTVYIDAS 840
+M + EI E + I+ S
Sbjct: 838 KMFISGEISEGDILKIEGS 856
>gi|170756703|ref|YP_001780063.1| clpB protein [Clostridium botulinum B1 str. Okra]
gi|387816648|ref|YP_005676992.1| clpb protein [Clostridium botulinum H04402 065]
gi|429244312|ref|ZP_19207779.1| clpb protein [Clostridium botulinum CFSAN001628]
gi|169121915|gb|ACA45751.1| clpB protein [Clostridium botulinum B1 str. Okra]
gi|322804689|emb|CBZ02241.1| clpb protein [Clostridium botulinum H04402 065]
gi|428758693|gb|EKX81098.1| clpb protein [Clostridium botulinum CFSAN001628]
Length = 866
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/867 (51%), Positives = 618/867 (71%), Gaps = 25/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K T K +AI + +A H Q +HL AL+S G+ + G
Sbjct: 1 MNIEKLTLKVQQAINDSQLVAVKYNHQQIDTIHLFSALISQDDGLIPNILGKMGVNIRDI 60
Query: 61 SAE--RVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+AE RV + M K+ + + + +V +A+ K D++++V+ ++L ++
Sbjct: 61 NAETNRVLDN-MPKVLGEGAQSSSVYPTRRFEEVFVKAEQIAKDFKDSYISVEHVLLAIM 119
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ + + + ++ GV + + +RG ++V++ + T++AL YGR+LVE+A
Sbjct: 120 DVDRNTVLPILEKFGVKKSEFLKALSAVRG--SQRVDNQDPEGTYEALVKYGRNLVEEAK 177
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP +L
Sbjct: 178 KHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPESLK 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG++ILFIDEIH ++GAG+TEGSM
Sbjct: 238 NKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGRIILFIDEIHTIVGAGKTEGSM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V EP+V DTVSILRGL
Sbjct: 298 DAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVITDEPTVEDTVSILRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E +HG+RI D A+V AA+LS+RYIT R+LPDKAIDL+DEACA +R +DS P E+D
Sbjct: 358 KERFEIYHGIRIHDSAIVAAAKLSSRYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+++RK QLEIE AL KEKD ASK RL + KEL +L++K + + +Y+ EK I +IR
Sbjct: 418 SMKRKIFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIR 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTET 531
LK+K +++ +++AER YDL + A+L+YG I ++ I + E S+ N ML E
Sbjct: 478 DLKEKLDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEE 537
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V +I+E++S+WTGIPVTRL + E+++L IG EAV AV +V+R+RAG
Sbjct: 538 VTEQEISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME++SVSRLIGAP
Sbjct: 598 LKDPRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEENIIRIDMSEYMEKYSVSRLIGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+ +DF+
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKVIDFK 717
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSNLG+ +LL + + R +V + ++ F+PE LNR+D+I++F PL+ E
Sbjct: 718 NTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEALKARFKPEFLNRVDDIIMFKPLTVE 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++++ + + D+ RL ++ + L +TD+A DI+ E YDPIYGARP++R++E + TE+
Sbjct: 778 DIKRIIDIFLDDIRKRLKDKNIQLKITDSAKDIMAKEGYDPIYGARPLKRYIEDTIETEI 837
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLV 847
++ ++ I E +TV +D KG+++V
Sbjct: 838 AKQIIAGNIYEGTTVGVDL--KGESIV 862
>gi|154499888|ref|ZP_02037926.1| hypothetical protein BACCAP_03545 [Bacteroides capillosus ATCC
29799]
gi|150271486|gb|EDM98743.1| ATP-dependent chaperone protein ClpB [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 876
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/865 (53%), Positives = 613/865 (70%), Gaps = 35/865 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T K+ EAI A +AT G+ Q HL +ALL +G+ Q + G +
Sbjct: 1 MNANKYTQKSLEAIQEAQAVATEYGNQQIEQAHLLLALLETENGLIPQLLAKMGLTVPSF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+A ++KLP + + E I + + K + A++ ++ D ++V+ L+L L
Sbjct: 61 AA--AVKNEVQKLPRVSGSGREQGKIYVAQDVDKTLNTAESIAESMKDEFISVEHLLLAL 118
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++ +S + LF+ V + + +RG + +V S + + T+ ALK YG DLVE+A
Sbjct: 119 VDCANSSLKHLFQTYRVTREGILQALSSIRGNQ--RVTSDNPEETYDALKKYGSDLVERA 176
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD+EIR V+RILSR+TKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP +L
Sbjct: 177 RQNKLDPVIGRDDEIRNVIRILSRKTKNNPVLIGEPGVGKTAIAEGLAQRIVKGDVPGSL 236
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + ALDMGAL+AGAKYRGEFEERLKAVL EV+++EGK+ILFIDE+H ++GAG+TEG+
Sbjct: 237 KDKTIFALDMGALIAGAKYRGEFEERLKAVLNEVKKSEGKIILFIDELHTIVGAGKTEGA 296
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KP+LARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V EP+V DT++ILRG
Sbjct: 297 MDAGNLLKPLLARGELHCIGATTLNEYRQYIEKDAALERRFQPVLVNEPTVEDTIAILRG 356
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE +HGV+I D A++ AA LS RYIT R LPDKAIDL+DEACA +R ++DS P E+
Sbjct: 357 LKERYEVYHGVKITDSAIIAAATLSNRYITDRFLPDKAIDLIDEACAMIRTEIDSMPTEL 416
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D ++RK Q EIE AL+KE DK S L E++KEL D+R+ + +++ EK I ++
Sbjct: 417 DIIQRKITQHEIEEAALKKETDKISLEHLAEIQKELSDMREDFKARKAQWENEKNAIGKV 476
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEV------EAAIGQLEGNQSDENLM 527
++L+++ E+ L++A+R YDL +AA+L+YG I E+ E A+ Q Q EN +
Sbjct: 477 QKLREELEKANAELEKAQRTYDLNKAAELQYGRIPELRKQLEAEEALAQ----QGKENSL 532
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLR 576
L + V ++IA ++ RWTGIPV +L + E+E+L IG EAV V+E++LR
Sbjct: 533 LRDKVTEEEIARIIERWTGIPVAKLMEGEREKLLHLEDILHKRVIGQDEAVRLVSEAILR 592
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
SRAG+ P +P GSFLFLGPTGVGKTELAK LAE LFD E LVRIDMSEYME+ SVSRL
Sbjct: 593 SRAGIADPNKPIGSFLFLGPTGVGKTELAKTLAEALFDSEKNLVRIDMSEYMEKFSVSRL 652
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
IGAPPGYVG+EEGGQLTEAVRR PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRT
Sbjct: 653 IGAPPGYVGYEEGGQLTEAVRRHPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRT 712
Query: 697 VDFRNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVF 754
VDF+NT+II+TSNLG++ LL G+ G+++ Q ARDQV ++ FRPE LNRLDEIV +
Sbjct: 713 VDFKNTIIILTSNLGSQFLLDGIDADGEIS-QTARDQVNDLLKHSFRPEFLNRLDEIVFY 771
Query: 755 DPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEK 814
PL+ + + L + D+ RLA++ + + +T AA D V+ SYDPIYGARP+RR+++
Sbjct: 772 KPLTKSNVTHIIDLLVADLNRRLADKQLTVELTQAAKDFVIDSSYDPIYGARPLRRFVQH 831
Query: 815 KVVTELSRMLVREEIDENSTVYIDA 839
V T +SR ++ +++ T+ +D
Sbjct: 832 TVETLISRKIIADQVSPGDTITVDC 856
>gi|427709446|ref|YP_007051823.1| ATP-dependent chaperone ClpB [Nostoc sp. PCC 7107]
gi|427361951|gb|AFY44673.1| ATP-dependent chaperone ClpB [Nostoc sp. PCC 7107]
Length = 879
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/862 (51%), Positives = 618/862 (71%), Gaps = 30/862 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA ++A Q HL ALL A +I G N +
Sbjct: 5 NPNQFTEKAWEAIAHTPDIAKQYHQQQIESEHLLKALLEQEG--LASSILTKAGANLQKI 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R +Q +++ P + + +L ++ RA +K D +++++ L+LG +D
Sbjct: 63 RDRT-DQFLQRQPRVSGTSSSVFLGRSLDTLLDRADNYRKDFKDEYISIEHLLLGYAKDD 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G L +E G+ ++K+ ++++RG + KV + + ++AL+ YGRDL E A G+L
Sbjct: 122 RFGKGLLQEFGLDEGKLKNIIKQIRGSQ--KVTDQNPEGKYEALEKYGRDLTEAARKGQL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR V+ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGDVPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKEV E+ G ++LFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGL+E+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLRERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AAQLS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 ENHHGVKISDSALVAAAQLSGRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + KE+ D +++ + L +++ EK+ I++I+ +K+
Sbjct: 420 KILQLEMEKLSLKKESDAASRERLERLEKEIADFKEEQRTLNTQWQSEKDIIEKIQSVKK 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ E + +Q+AER YDL RAA+L+YG + ++++ A +L Q +L E V
Sbjct: 480 EIERVNLEIQQAERNYDLNRAAELKYGNLTDLHRQLQVAESELANAQRSGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAEV+S+WTGIP+++L ++EKE+L IG EAV AVA+++ RSRAGL
Sbjct: 540 SDIAEVISKWTGIPISKLVESEKEKLLHLEDELHQRVIGQDEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA +FD E+ LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFVFLGPTGVGKTELAKALAGYMFDTEDALVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN LQ+LDDGR+TD QG TVDF+N++
Sbjct: 660 VGYEEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDFKNSI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++ +L R +V++ +R FRPE LNR+DE+++F L ++LR
Sbjct: 720 IIMTSNIGSQFILDIAGDNSRYDEMRHRVMEAMRNSFRPEFLNRIDELIIFHSLDKKELR 779
Query: 764 KVARLQ-------MKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
+ +LQ + D + L +R ++L + DAALD + YDP++GARP++R +++++
Sbjct: 780 HIVQLQVGRLRERLSDTSSGLRQRKISLKLADAALDFLAEVGYDPVFGARPLKRAIQREL 839
Query: 817 VTELSRMLVREEIDENSTVYID 838
T++++ ++R E + T+++D
Sbjct: 840 ETQIAKAILRGEFHDGDTIFVD 861
>gi|338973153|ref|ZP_08628522.1| ClpB protein [Bradyrhizobiaceae bacterium SG-6C]
gi|338233725|gb|EGP08846.1| ClpB protein [Bradyrhizobiaceae bacterium SG-6C]
Length = 877
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/859 (52%), Positives = 610/859 (71%), Gaps = 21/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A LA GH QFTPLH+ LL D G+ I+ +GG + +
Sbjct: 1 MNIEKYTDRVKGFIQSAQTLAMREGHQQFTPLHILKVLLDDSEGLAGGLIDRSGGNS--R 58
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ + A+ K+P + A ++ + + A+ A + GD+ + V++L+ L
Sbjct: 59 AILKATEDALNKMPKVSGAGAGQVYLAPATARAFDAAEQAAEKAGDSFVTVERLLQALAA 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+DS G L + GV + + + LR +GR +SAS + + ALK Y RDL E A
Sbjct: 119 DKDSDAGALLAKGGVTPQNLNAAINALR--KGRTADSASAENAYDALKKYARDLTEAAHD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIINGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
++++LDMGAL+AGAKYRGEFEERLKAVL EV ++G++ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKVLSLDMGALIAGAKYRGEFEERLKAVLSEVTSSDGQIILFIDEMHTLVGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ V+V+EP+V D VSILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDAVSILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+DN
Sbjct: 357 EKYELHHGVRITDSAIVSAATLSNRYITDRFLPDKAIDLIDEAAARLKMQIDSKPEELDN 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L+IE AL+KE D ASK RL + KEL DL +K L +++ E++++ ++
Sbjct: 417 IDREIVRLKIEQEALKKETDSASKDRLQRLEKELADLEEKGGALTAKWQSERDKLSNAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
+K + E+ L +A+RR + +A +L YG I E+E + LE ++ N++L E V
Sbjct: 477 VKSELEQARQELADAQRRGEFQKAGELAYGRIPELEKKLKALEESEKAGNVVLEEAVTSS 536
Query: 536 QIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+A+VVSRWTGIPV ++ G+ EK ER+IG AEAV AV+ +V RSRAGL P
Sbjct: 537 HVAQVVSRWTGIPVDKMLEGEREKLLKMELQLAERVIGQAEAVGAVSTAVRRSRAGLQDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LFDDE +VR+DMSE+ME+HSV+RLIGAPPGYV
Sbjct: 597 NRPIGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRLDMSEFMEKHSVARLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 657 GYDEGGVLTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L+S G+ T V R+QV+ VR FRPE LNR+DEI++F L ++ +
Sbjct: 717 IMTSNLGSEFLVSQAEGEDTSAV-REQVMAVVRASFRPEFLNRVDEIILFHRLQRTEMGR 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +QM+ + LA+R + L + + A + + A+ +DP YGARP++R +++ V L+ M+
Sbjct: 776 IVDIQMRRLLKLLADRKITLTLDEKAREWLAAKGWDPAYGARPLKRAIQRAVQDPLAEMI 835
Query: 825 VREEIDENSTVYIDASPKG 843
+ I + V + A +G
Sbjct: 836 LSGRIHDGENVVVSAKDEG 854
>gi|187776981|ref|ZP_02993454.1| hypothetical protein CLOSPO_00526 [Clostridium sporogenes ATCC
15579]
gi|187773909|gb|EDU37711.1| ATP-dependent chaperone protein ClpB [Clostridium sporogenes ATCC
15579]
Length = 866
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/867 (51%), Positives = 620/867 (71%), Gaps = 25/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K +AI + +A H Q +HL AL+S G+ + G
Sbjct: 1 MDIEKLTLKVQQAINDSQLVAVKYNHQQIDTIHLFSALISQDDGLIPNILGKMGVNIRDI 60
Query: 61 SAE--RVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+AE RV + +M K+ + + + +V +A++ K D++++V+ ++L ++
Sbjct: 61 NAETNRVLD-SMPKVLGEGAQSSSVYPTRRFEEVFVKAESIAKDFKDSYISVEHVLLAIM 119
Query: 119 EDSQIGDL--FKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ + L ++ GV + + +RG ++V++ + T++AL YGR+LVE+A
Sbjct: 120 DVDKNNALPILEKFGVKKSEFLKALSAVRG--SQRVDTQDPEGTYEALVKYGRNLVEEAK 177
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP +L
Sbjct: 178 KHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPESLK 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG++ILFIDEIH ++GAG+TEGSM
Sbjct: 238 NKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGRIILFIDEIHTIVGAGKTEGSM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V EP+V DTVSILRGL
Sbjct: 298 DAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVITDEPTVEDTVSILRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E +HG+RI D A+V AA+LS+RYIT R+LPDKAIDL+DEACA +R +DS P E+D
Sbjct: 358 KERFEIYHGIRIHDSAIVAAAKLSSRYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+++RK QLEIE AL KE+D ASK RL + KEL +L++K + + +Y+ EK I +IR
Sbjct: 418 SMKRKIFQLEIEKEALSKERDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIR 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTET 531
LK+K +++ +++AER YDL + A+L+YG I ++ I + E S+ N ML E
Sbjct: 478 DLKEKLDDVRGQMEKAEREYDLNKVAELKYGLIPTLQREIEEKEKLIKENSNGNAMLKEE 537
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V +I+E++S+WTGIPVTRL + E+++L IG +EAV AV +V+R+RAG
Sbjct: 538 VTEQEISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQSEAVKAVTNAVIRARAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME++SVSRLIGAP
Sbjct: 598 LKDPRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEENIIRIDMSEYMEKYSVSRLIGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+ +DF+
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKVIDFK 717
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSNLG+ +LL + + R +V + ++ F+PE LNR+D+I++F PL+ E
Sbjct: 718 NTIIIMTSNLGSNYLLDNESKEGIDESVRVRVKEALKARFKPEFLNRVDDIIMFKPLTVE 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++++ + + D+ RL ++ + L +TD+A DI+ E YDPIYGARP++R++E + TE+
Sbjct: 778 DIKRIIDIFLDDIRKRLKDKNIQLKITDSAKDIMAKEGYDPIYGARPLKRYIEDTIETEI 837
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLV 847
++ ++ I E +TV +D KG+++V
Sbjct: 838 AKQIIAGNIYEGTTVGVDI--KGESIV 862
>gi|86751350|ref|YP_487846.1| ATPase AAA [Rhodopseudomonas palustris HaA2]
gi|86574378|gb|ABD08935.1| AAA_5 ATPase [Rhodopseudomonas palustris HaA2]
Length = 879
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/865 (53%), Positives = 614/865 (70%), Gaps = 26/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP+K+T + + A LA GH QF+PLH+ LL D G+ I+ +GG ++
Sbjct: 1 MNPEKYTERVRGFVQSAQSLAVREGHQQFSPLHILKVLLDDSEGLAGGLIDRSGGN--SR 58
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ + A+ K+P S + A A T + QAA+KA GD+ + V++L+L L
Sbjct: 59 AILKATEDALGKMPKVSGSGAGQVYLAPATARALDGAEQAAEKA-GDSFVTVERLLLALS 117
Query: 119 --EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+DS+ G L + GV + + + LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 118 LDKDSEAGQLLAKGGVTPQNLNAAINALR--KGRTADSATAENAYDALKKYARDLTQAAR 175
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP +L
Sbjct: 176 DGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +L+ALDMGAL+AGAKYRGEFEERLKAVL EV A G ++LFIDE+H ++GAG+ +G+M
Sbjct: 236 DKKLLALDMGALIAGAKYRGEFEERLKAVLNEVTAAAGGIVLFIDEMHTLVGAGKADGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA+NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ V+V+EP+V DT+SILRGL
Sbjct: 296 DASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
K+KYE HHGVRI D ALV A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D
Sbjct: 356 KDKYEQHHGVRIADSALVAATTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+++R+ ++L+IE AL+KE D SK+RLV + KEL DL +K L R+ EK ++ + +
Sbjct: 416 SMDREIVRLKIEQEALKKESDAGSKSRLVTLEKELADLEEKSAALTQRWSAEKNKLSDAQ 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
+LK + + L L +A+RR + RA +L YG I E+E + +E N+ + M+ E V
Sbjct: 476 KLKSELDGLRLELADAQRRGEYQRAGELAYGRIPELEKRLADIEANE-NAGEMMEEAVTA 534
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
D IA+VVSRWTG+PV ++ + EKE+L +G EAV+AV+ +V R+RAGL
Sbjct: 535 DHIAQVVSRWTGVPVDKMLEGEKEKLLRMEEQIGKRVVGQFEAVHAVSTAVRRARAGLQD 594
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSF+FLGPTGVGKTEL KALA+ LFDDE +VR+DMSEYME+HSV+RLIGAPPGY
Sbjct: 595 PNRPMGSFMFLGPTGVGKTELTKALAQYLFDDETAMVRLDMSEYMEKHSVARLIGAPPGY 654
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+
Sbjct: 655 VGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTL 714
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
I+MTSNLG+E+L++ G+ T V R+QV+ VR HFRPE LNR+DEI++F L ++
Sbjct: 715 IVMTSNLGSEYLVNQPEGEDT-GVVREQVMDMVRAHFRPEFLNRVDEIILFHRLQKNEMG 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +Q +A L +R + L + AA D + + +DP YGARP++R +++ V L+ M
Sbjct: 774 RIVDIQFSRLAKLLEDRKIVLDLDPAARDWLAEKGWDPAYGARPLKRVIQRHVQDPLAEM 833
Query: 824 LVREEIDENSTVYIDASPKGDNLVY 848
++ + + + V I S +G L +
Sbjct: 834 ILDGTVSDGAKVAI--STEGGVLTF 856
>gi|414170239|ref|ZP_11425853.1| chaperone ClpB [Afipia clevelandensis ATCC 49720]
gi|410884911|gb|EKS32731.1| chaperone ClpB [Afipia clevelandensis ATCC 49720]
Length = 877
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/859 (53%), Positives = 608/859 (70%), Gaps = 21/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A LA GH QFTPLH+ LL D G+ I+ +GG + A
Sbjct: 1 MNIEKYTDRVKGFIQSAQTLAMREGHQQFTPLHILKVLLDDSEGLAGGLIDRSGGNSRA- 59
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ A+ K+P + A ++ + + A+ A + GD+ + V++L+ L
Sbjct: 60 -ILKATEDALNKMPKVSGAGAGQVYLAPATARAFDAAEQAAEKAGDSFVTVERLLQALAA 118
Query: 120 D--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D S G L + GV + + + LR +GR +SAS + + ALK Y RDL E A
Sbjct: 119 DKESDAGALLAKGGVTPQNLNAAINALR--KGRTADSASAENAYDALKKYARDLTEAAHD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIINGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
++++LDMGAL+AGAKYRGEFEERLKAVL EV ++G++ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKVLSLDMGALIAGAKYRGEFEERLKAVLSEVTSSDGQIILFIDEMHTLVGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ V+V+EP+V D VSILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDAVSILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+DN
Sbjct: 357 EKYELHHGVRITDSAIVSAATLSNRYITDRFLPDKAIDLIDEAAARLKMQIDSKPEELDN 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L+IE AL+KE D ASK RL + KEL DL +K L +++ E++++ ++
Sbjct: 417 IDREIVRLKIEQEALKKETDSASKDRLQRLEKELADLEEKGAALTAKWQSERDKLSNAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
+K + E+ L +A+RR + +A +L YG I E+E + LE ++ N++L E V
Sbjct: 477 VKSELEQARQELADAQRRGEFQKAGELAYGRIPELEKKLKALEESEKAGNVVLEEAVTSS 536
Query: 536 QIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+A+VVSRWTGIPV ++ G+ EK ER+IG AEAV AV+ +V RSRAGL P
Sbjct: 537 HVAQVVSRWTGIPVDKMLEGEREKLLKMELQLAERVIGQAEAVGAVSTAVRRSRAGLQDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LFDDE +VR+DMSE+ME+HSV+RLIGAPPGYV
Sbjct: 597 NRPIGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRLDMSEFMEKHSVARLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 657 GYDEGGVLTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L+S G+ T V R+QV+ VR FRPE LNR+DEI++F L ++ +
Sbjct: 717 IMTSNLGSEFLVSQAEGEDTSAV-REQVMAVVRASFRPEFLNRVDEIILFHRLQRTEMGR 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +QM+ + LA+R + L + + A + + A+ +DP YGARP++R +++ V L+ M+
Sbjct: 776 IVDIQMRRLLKLLADRKITLTLDEKAREWLAAKGWDPAYGARPLKRAIQRAVQDPLAEMI 835
Query: 825 VREEIDENSTVYIDASPKG 843
+ I + V + A +G
Sbjct: 836 LSGRIHDGENVVVSAKDEG 854
>gi|365888187|ref|ZP_09426975.1| Chaperone [Bradyrhizobium sp. STM 3809]
gi|365336144|emb|CCD99506.1| Chaperone [Bradyrhizobium sp. STM 3809]
Length = 879
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/864 (53%), Positives = 608/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK+T + I A LA GH QF+PLHL LL D G+ I+ AGG + A
Sbjct: 1 MNIDKYTERARGFIQSAQSLAVRDGHQQFSPLHLLKVLLDDSEGLAGGLIDRAGGNSRA- 59
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ A+ K+P + +I S L + A+ A + GD+ + V++L+LGL
Sbjct: 60 -ILKATEDALGKMPKVSGSGAGQIYLSPELARAFDAAEKAAEKAGDSFVTVERLLLGLTL 118
Query: 120 D--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D S+ G + + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 DAKSETGSILAKGGVTAQNLNAAIESLR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
RL++LD+GAL+AGAKYRGEFEERLKAVL+EV AEG +LFIDE+H ++GAG+ +G+MD
Sbjct: 237 KRLLSLDLGALIAGAKYRGEFEERLKAVLQEVTAAEGTFVLFIDEMHTLIGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EY+K+VEKDAA RRFQ VYV EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPVYVTEPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV +A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ ++L+IE AL+KE D SK RL + KEL DL +K L ++ EK+++ ++
Sbjct: 417 LDREIIRLKIEQEALKKESDLGSKTRLQALEKELADLEEKSASLTAKWSAEKDKLSNAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + +A +L YG I E+E + +E ++ M+ E V +
Sbjct: 477 LKSELDGLRIELANAQRRGEYQKAGELAYGRIPELEKRLADIEAKETSGE-MMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EK++L +G EAV+AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKDKLLRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T +V R+ V+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSEFLVNQPEGEDTSEV-RELVMGTVRSHFRPEFLNRVDEIILFHRLQKSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L ER + L++ A D + A+ +DP YGARP++R +++ V L+ M+
Sbjct: 775 IVEIQFSRLQKLLEERKITLSLDGDARDWLAAKGWDPAYGARPLKRVIQRSVQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ +I + V I S +G+ L +
Sbjct: 835 LAGDIKDGDKVAI--SSEGNVLTF 856
>gi|430811852|emb|CCJ30708.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1944
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/863 (51%), Positives = 609/863 (70%), Gaps = 35/863 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT KT + I+ ++ LA S GH+Q TP+H+A+ LL + + + I G + ++ ER
Sbjct: 4 QFTDKTEKTISDSYSLAQSHGHSQLTPIHIALTLLMEENPQLLRVIIEKSGGDVSK-FER 62
Query: 65 VFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG 124
+ + ++P Q PAP+ + S +K++R A QK D ++A D LI L ED I
Sbjct: 63 DVRRLLVRMPVQEPAPENVSLSPQCMKMLRTAHELQKRQRDVYMAQDHLISALSEDPAIK 122
Query: 125 DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVI 182
+ E G+ + ++K+RG ++ES S ++ F +L Y DL EQA G LDPVI
Sbjct: 123 AILSEMGITSQLLDQAIQKVRG--NHRIESKSAESGFDSLSKYTVDLTEQARNGTLDPVI 180
Query: 183 GRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALD 242
GR++EIRR +R+LSRRTKNNPVLIGEPGVGKT+V+EGLAQRIV DVPSNL +L++LD
Sbjct: 181 GREDEIRRTIRVLSRRTKNNPVLIGEPGVGKTSVIEGLAQRIVNSDVPSNLLTCKLLSLD 240
Query: 243 MGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFK 301
+GALVAG+K+RGEFEER+K+VLKEVE+++ +ILF+DEIHL++GAG T EG MDAANL K
Sbjct: 241 VGALVAGSKFRGEFEERIKSVLKEVEDSQEIIILFVDEIHLLMGAGNTGEGGMDAANLLK 300
Query: 302 PMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGH 361
PMLARG+L CIGATTL EYRKY+EKDAAFERRFQQ+ V EPS+P+ +SILRGLKEKYE H
Sbjct: 301 PMLARGKLHCIGATTLGEYRKYIEKDAAFERRFQQILVKEPSLPECISILRGLKEKYEVH 360
Query: 362 HGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRM 421
HGV I D +LV AA L++RY+TGR LPD AIDL+DEA A+VRV DS PEE+DNLER+
Sbjct: 361 HGVTILDSSLVSAATLASRYLTGRRLPDSAIDLIDEAAASVRVARDSAPEELDNLERQLR 420
Query: 422 QLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKRE 481
QL++E+HALE+EKD SK RL + R E+ ++ +KL PL RY+ EK+R+++I++ K++ +
Sbjct: 421 QLQVEIHALEREKDDLSKERLAKARLEMANVEEKLLPLRERYQIEKQRVNDIQKAKKRLD 480
Query: 482 ELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG-----------NQSDENLMLTE 530
EL +AERR DL AADL Y AI +++ I LE S+ L+LT+
Sbjct: 481 ELKAKALDAERRMDLQTAADLTYYAIPDLQKRIEDLEALKARADAEVIEKSSEPKLLLTD 540
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V DQI E+V+RWTGIPVTRL +EKE+L +G +AV AVA ++ SR+
Sbjct: 541 VVTTDQINEIVARWTGIPVTRLTLSEKEKLLRMEKSLSQYVVGQKDAVKAVANAIRLSRS 600
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P QP SFLF GP+G GKT L K LAE LFDD+N ++RIDM+EY E+HSVSRLIGA
Sbjct: 601 GLSNPNQPIASFLFCGPSGTGKTLLTKQLAEFLFDDKNAMIRIDMTEYTEKHSVSRLIGA 660
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+++GGQLTE ++RRP+SV+LFDE+EKA V LLQVLDDGRLT GQ +T+D
Sbjct: 661 PPGYVGYDQGGQLTEQLKRRPFSVILFDEIEKAAQEVLTVLLQVLDDGRLTSGQSQTIDA 720
Query: 700 RNTVIIMTSNLGAEHLLSGMM---GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
+N VIIMTSNLGAE+L + + GK T ++ + V+ +RK F+PE L R +V+F+
Sbjct: 721 KNAVIIMTSNLGAEYLTNTVATPDGK-TDEITKAMVMDSIRKFFKPEFLGRT-TVVMFNR 778
Query: 757 LSHEQLRKVARLQMKDVAIRLAE--RGVALAVTDAALDIVLAESYDPIYGARPIRRWLEK 814
L+ + +R++ Q++++ RL + R + + V DAA+ + Y P YGARP++R ++
Sbjct: 779 LTKKNMREIVIKQIEEIQKRLEDNNRKIKIEVDDAAIAYLSEAGYSPAYGARPLKRIIQN 838
Query: 815 KVVTELSRMLVREEIDENSTVYI 837
+++ +LS ++R +I +N TV I
Sbjct: 839 EILNKLSIFMLRGQIRDNETVNI 861
>gi|237793732|ref|YP_002861284.1| clpB protein [Clostridium botulinum Ba4 str. 657]
gi|229261258|gb|ACQ52291.1| clpB protein [Clostridium botulinum Ba4 str. 657]
Length = 866
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/868 (51%), Positives = 616/868 (70%), Gaps = 27/868 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K +AI + +A H Q +HL AL+S G+ + G
Sbjct: 1 MDIEKLTLKVQQAINDSQLVAVKYNHQQIDTIHLFSALISQDDGLIHNILGKMGVNIRDI 60
Query: 61 SAERVFNQAMKKLPS---QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+AE N + +P + + + +V +A+ K D++++V+ ++L +
Sbjct: 61 NAET--NMVLDNMPKVLGEGAQSSSVYPTRRFEEVFVKAEQIAKDFKDSYISVEHVLLAI 118
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++ + + + ++ GV + + +RG ++V+S + T++AL YGR+LVE+A
Sbjct: 119 MDVDKNNVYPILEKFGVKKSEFLKALSAVRG--SQRVDSQDPEGTYEALVKYGRNLVEEA 176
Query: 176 GK--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
K LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP +L
Sbjct: 177 KKHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPESL 236
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ + +LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG++ILFIDEIH ++GAG+TEGS
Sbjct: 237 KNKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGRIILFIDEIHTIVGAGKTEGS 296
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V EP+V DTVSILRG
Sbjct: 297 MDAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVITDEPTVEDTVSILRG 356
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE++E +HG+RI D A+V AA+LS+RYIT R+LPDKAIDL+DEACA +R +DS P E+
Sbjct: 357 LKERFEIYHGIRIHDSAIVAAAKLSSRYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEM 416
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D+++RK QLEIE AL KEKD ASK RL + KEL +L++K + + +Y+ EK I +I
Sbjct: 417 DSMKRKIFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKI 476
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTE 530
R LK+K +++ +++AER YDL + A+L+YG I ++ I + E S+ N ML E
Sbjct: 477 RDLKEKLDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V +I+E++S+WTGIPVTRL + E+++L IG EAV AV +V+R+RA
Sbjct: 537 EVTEQEISEIISKWTGIPVTRLVETERQKLLQLGDQLEARVIGQGEAVKAVTNAVIRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P++P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME++SVSRLIGA
Sbjct: 597 GLKDPRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEENIIRIDMSEYMEKYSVSRLIGA 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+ +DF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKVIDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSNLG+ +LL + + R +V + ++ F+PE LNR+D+I++F PL+
Sbjct: 717 KNTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEALKARFKPEFLNRVDDIIMFKPLTV 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E ++++ + + D+ RL ++ + L +TD+A DI+ E YDPIYGARP++R++E + TE
Sbjct: 777 EDIKRIIDIFLDDIRKRLKDKNIQLKITDSAKDIMAKEGYDPIYGARPLKRYIEDTIETE 836
Query: 820 LSRMLVREEIDENSTVYIDASPKGDNLV 847
+++ ++ I E +TV +D KG+++V
Sbjct: 837 IAKQIIAGNIYEGTTVGVDL--KGESIV 862
>gi|153939896|ref|YP_001389780.1| clpB protein [Clostridium botulinum F str. Langeland]
gi|384460852|ref|YP_005673447.1| clpB protein [Clostridium botulinum F str. 230613]
gi|152935792|gb|ABS41290.1| clpB protein [Clostridium botulinum F str. Langeland]
gi|295317869|gb|ADF98246.1| clpB protein [Clostridium botulinum F str. 230613]
Length = 866
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/867 (51%), Positives = 621/867 (71%), Gaps = 25/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K +AI + +A H Q +HL AL+S G+ + G
Sbjct: 1 MDIEKLTLKVQQAINDSQLVAVKYNHQQIDTIHLFSALISQDDGLIPNILGKMGVNIRDI 60
Query: 61 SAE--RVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+AE RV + +M K+ + + + +V+ +A++ K D++++V+ ++L ++
Sbjct: 61 NAETNRVLD-SMPKVLGEGAQSSSVYPTRRFEEVLVKAESIAKDFKDSYISVEHVLLAVM 119
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ + + + ++ GV + + +RG ++V++ + T++AL YGR+LVE+A
Sbjct: 120 DVDRNTVLPILEKFGVKKSEFLKALSAVRG--SQRVDNQDPEGTYEALVKYGRNLVEEAK 177
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP +L
Sbjct: 178 KHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPESLK 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG++ILFIDEIH ++GAG+TEGSM
Sbjct: 238 NKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGRIILFIDEIHTIVGAGKTEGSM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V EP+V DTVSILRGL
Sbjct: 298 DAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVITDEPTVEDTVSILRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E +HG+RI D A+V AA+LS+RYIT R+LPDKAIDL+DEACA +R +DS P E+D
Sbjct: 358 KERFEIYHGIRIHDSAIVAAAKLSSRYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+++RK QLEIE AL KEKD ASK RL + KEL +L++K + + +Y+ EK I +IR
Sbjct: 418 SMKRKIFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIR 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTET 531
LK+K +++ +++AER YDL + A+L+YG I ++ I + E S+ N ML E
Sbjct: 478 DLKEKLDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEE 537
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V +I+E++S+WTGIPVTRL + E+++L IG EAV AV +V+R+RAG
Sbjct: 538 VTEQEISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME++SVSRLIGAP
Sbjct: 598 LKDPRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEENIIRIDMSEYMEKYSVSRLIGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+ +DF+
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKVIDFK 717
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSNLG+ +LL + + R +V + ++ F+PE LNR+D+I++F PL+ E
Sbjct: 718 NTIIIMTSNLGSNYLLDNESKEGIDESVRTRVKEALKARFKPEFLNRVDDIIMFKPLTVE 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++++ + + D+ RL ++ + L +TD+A DI+ E YDPIYGARP++R++E + TE+
Sbjct: 778 DIKRIIDIFLDDIRKRLKDKNIQLRITDSAKDIMAKEGYDPIYGARPLKRYIEDTIETEI 837
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLV 847
++ ++ I E +TV +D KG+++V
Sbjct: 838 AKQIIAGNIYEGTTVGVDL--KGESIV 862
>gi|282900582|ref|ZP_06308524.1| ATPase [Cylindrospermopsis raciborskii CS-505]
gi|281194382|gb|EFA69337.1| ATPase [Cylindrospermopsis raciborskii CS-505]
Length = 871
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/866 (51%), Positives = 622/866 (71%), Gaps = 25/866 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA ++A Q HL ALL AI G N +
Sbjct: 5 NPNQFTEKAWEAIAHTPDIAKQHQQQQLESEHLMKALLEQDG--LGNAIFTKAGTNIKKI 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ Q + + P + + + +L ++ RA+ ++ D +++V+ ++LG +D
Sbjct: 63 TDYT-EQFIIRQPKVSGSSTSVYLGRSLDTLLDRAEKYRQEFKDEYISVEHILLGYCKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G +L +EAG+ A++K+ ++++RG + KV S + +Q+L+ YGRDL E A G+L
Sbjct: 122 RFGKNLLQEAGLDEAKLKNIIKQIRGSQ--KVTDQSPEGKYQSLEKYGRDLTEAAKKGQL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKEV E+ G ++LFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P VPDT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYLEKDAALERRFQQVYVDQPDVPDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D +LV AA LS+RYI+ R LPDKAIDLVDEA A +++ + S+PE++D ++R
Sbjct: 360 EVHHGVRISDSSLVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMGITSKPEKLDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS RL + KEL DL+++ L ++++ EK+ I +I+ +K+
Sbjct: 420 KILQLEMEKLSLQKESDPASNERLKTLEKELVDLKEEQAVLRIQWQSEKDIITKIQSIKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAI----GQLEGNQSDENLMLTETVGP 534
+ +++ +Q+A+R + RA++L YG + E++ + +L Q +L E V P
Sbjct: 480 EIDKVNLEIQQAQRITNHERASELIYGKLPELQKQLENTETELANTQRTGKSLLREEVTP 539
Query: 535 DQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRAGLGR 583
IAEV+S+WTGIP+++L ++ +R++G AEAV AVA+++ RSRAGL
Sbjct: 540 GDIAEVISKWTGIPISKLVESEKEKLLHLEEELHQRVVGQAEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA +FD E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFIFLGPTGVGKTELAKALAAYMFDTEESLVRIDMSEYMEKHTVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTE +RRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QGRTVDF+NT+
Sbjct: 660 VGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDSQGRTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L R +V++ +R FRPE LNR+DEI++F L +LR
Sbjct: 720 IIMTSNIGSQYILDVAGDDSRYDEMRHRVMETMRNSFRPEFLNRIDEIIIFHSLQKSELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
K+ +LQ++ + RL +R ++L ++ +ALD + YDP++GARP++R L++++ T++++
Sbjct: 780 KIVQLQVERLTQRLTDRKMSLELSGSALDFLAEVGYDPVFGARPLKRALQRELETKIAKA 839
Query: 824 LVREEIDENSTVYIDASPKGDNLVYR 849
++R E DE T+++D + + LV+R
Sbjct: 840 ILRGEFDEGDTIFVDV--QNERLVFR 863
>gi|168181276|ref|ZP_02615940.1| protein ClpB [Clostridium botulinum Bf]
gi|182675393|gb|EDT87354.1| protein ClpB [Clostridium botulinum Bf]
Length = 866
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/868 (51%), Positives = 616/868 (70%), Gaps = 27/868 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K +AI + +A H Q +HL AL+S G+ + G
Sbjct: 1 MDIEKLTLKVQQAINDSQLVAVKYNHQQIDTIHLFSALISQDDGLIPNILGKMGVNIRDI 60
Query: 61 SAERVFNQAMKKLPS---QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+AE N + +P + + + +V +A+ K D++++V+ ++L +
Sbjct: 61 NAET--NMVLDNMPKVLGEGAQSSSVYPTRRFEEVFVKAEQIAKDFKDSYISVEHVLLAI 118
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++ + + + ++ GV + + +RG ++V+S + T++AL YGR+LVE+A
Sbjct: 119 MDVDKNNVYPILEKFGVKKSEFLKALSAVRG--SQRVDSQDPEGTYEALVKYGRNLVEEA 176
Query: 176 GK--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
K LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP +L
Sbjct: 177 KKHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPESL 236
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ + +LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG++ILFIDEIH ++GAG+TEGS
Sbjct: 237 KNKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGRIILFIDEIHTIVGAGKTEGS 296
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V EP+V DTVSILRG
Sbjct: 297 MDAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVITDEPTVEDTVSILRG 356
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE++E +HG+RI D A+V AA+LS+RYIT R+LPDKAIDL+DEACA +R +DS P E+
Sbjct: 357 LKERFEIYHGIRIHDSAIVAAAKLSSRYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEM 416
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D+++RK QLEIE AL KEKD ASK RL + KEL +L++K + + +Y+ EK I +I
Sbjct: 417 DSMKRKIFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKI 476
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTE 530
R LK+K +++ +++AER YDL + A+L+YG I ++ I + E S+ N ML E
Sbjct: 477 RDLKEKLDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V +I+E++S+WTGIP+TRL + E+++L IG EAV AV +V+R+RA
Sbjct: 537 EVTEQEISEIISKWTGIPITRLVETERQKLLQLGDQLEARVIGQGEAVKAVTNAVIRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P++P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME++SVSRLIGA
Sbjct: 597 GLKDPRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEENIIRIDMSEYMEKYSVSRLIGA 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+ +DF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKVIDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSNLG+ +LL + + R +V + ++ F+PE LNR+D+I++F PL+
Sbjct: 717 KNTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEALKARFKPEFLNRVDDIIMFKPLTV 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E ++++ + + D+ RL ++ + L +TD+A DI+ E YDPIYGARP++R++E + TE
Sbjct: 777 EDIKRIIDIFLDDIRKRLKDKNIQLKITDSAKDIMAKEGYDPIYGARPLKRYIEDTIETE 836
Query: 820 LSRMLVREEIDENSTVYIDASPKGDNLV 847
+++ ++ I E +TV +D KG+++V
Sbjct: 837 IAKQIIAGNIYEGTTVGVDL--KGESIV 862
>gi|440785283|ref|ZP_20962130.1| clpb protein [Clostridium pasteurianum DSM 525]
gi|440218412|gb|ELP57633.1| clpb protein [Clostridium pasteurianum DSM 525]
Length = 864
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/867 (50%), Positives = 618/867 (71%), Gaps = 25/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
MN ++ T K +AI + +A H +HL +AL+S G+ + G E
Sbjct: 1 MNIERLTTKVKQAINDSQLVAVRFNHQTIDSIHLFMALVSQEDGLIPNIFSKMGVDIETL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ E ++ M K+ ++ + AS ++ +A+ K D++++ + +++ L+
Sbjct: 61 KKDIENELDR-MPKVLGESAQSSSVYASRRFEEIFIKAEKISKDFKDSYISSEHVMIALM 119
Query: 119 E---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
E + + ++ K + + ++RG ++V++ + T+ AL YGR+LVE A
Sbjct: 120 ELDKNDIVVNILKRNNIDKKEFLKTLAEIRG--NQRVDTEDPEGTYDALSKYGRNLVEDA 177
Query: 176 GK--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
K LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGD+P L
Sbjct: 178 KKHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDIPDGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ + +LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EGK+ILFIDEIH ++GAG+TEG+
Sbjct: 238 KNKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGKIILFIDEIHTIVGAGKTEGA 297
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KP+LARG+L CIGATT +EYRKY+EKD A ERRFQ V V EP+V D++SILRG
Sbjct: 298 MDAGNLIKPLLARGELHCIGATTFDEYRKYIEKDKALERRFQPVIVEEPTVEDSISILRG 357
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE++E HHGVRI D A++ AA+LS RYIT R+LPDKAIDL+DEA A +R ++DS P E+
Sbjct: 358 LKERFEIHHGVRIHDSAIIAAAKLSDRYITDRYLPDKAIDLIDEAGAMIRTEIDSMPTEM 417
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L+RK QLEIE AL KEKD+A++ RL + +EL +L++K + + +Y+KEK +I E+
Sbjct: 418 DMLKRKIFQLEIEKEALSKEKDRATEERLKSLEEELSNLKEKDKEMTSKYEKEKGQITEV 477
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG--NQSDENLMLTET 531
+ LK K +E+ +++AER YDL RAA+L+YG + ++E I + E + EN +L E
Sbjct: 478 KELKTKLDEVRGQIEKAEREYDLNRAAELKYGMVPQLEKEINEKEQLIKEKTENALLKEE 537
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++I++++S+WTGIPV+RL + E+++L IG EA+ +V+ +V+R+RAG
Sbjct: 538 VTEEEISQIISKWTGIPVSRLVEGERQKLLKLEDELRKRVIGQDEAIKSVSNAVIRARAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L ++P GSF+FLGPTGVGKTELAK L+ LFD E ++RIDMSEYME++SVSRLIGAP
Sbjct: 598 LKDIKRPIGSFIFLGPTGVGKTELAKTLSRTLFDTEENIIRIDMSEYMEKYSVSRLIGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF+
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKTVDFK 717
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
N +IIMTSN+G+ HLLS + R V+ E++ F+PE LNRLD+I++F PL+
Sbjct: 718 NCIIIMTSNIGSSHLLSNTSESGIDENIRKYVMDEMKARFKPEFLNRLDDIIMFKPLTTS 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++ K+ + ++D+ RL E+ + L +TD A ++ E YDP+YGARP++R++E + TE+
Sbjct: 778 EITKIIDIFIEDIRKRLNEKNIKLHITDEAEKLMAREGYDPVYGARPLKRYIENTLETEI 837
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLV 847
+R ++ +I + +TV +DA +GDN+V
Sbjct: 838 ARKIIAGQIYDGTTVKVDA--RGDNIV 862
>gi|299132195|ref|ZP_07025390.1| ATP-dependent chaperone ClpB [Afipia sp. 1NLS2]
gi|298592332|gb|EFI52532.1| ATP-dependent chaperone ClpB [Afipia sp. 1NLS2]
Length = 877
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/862 (54%), Positives = 609/862 (70%), Gaps = 30/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MN +K+T + I A LA GH QF+PLH+ LL DP G+ I+ AGG + A
Sbjct: 1 MNVEKYTDRVKGFIQSAQSLALREGHQQFSPLHILKVLLDDPEGLAGGLIDRAGGNSRAI 60
Query: 60 -QSAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILG 116
Q+ E QA+ KLP S A A T QAA+KA GD+ + V++L+L
Sbjct: 61 LQATE----QALAKLPKVSGGGAGQIYLAPETARAFTAAEQAAEKA-GDSFVTVERLLLA 115
Query: 117 LL--EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
L +DS+ G+L + GV + + + LR +GR +SAS + + ALK Y RDL +
Sbjct: 116 LTLDKDSEAGNLLAKGGVTPQNLNAAINALR--KGRTADSASAENAYDALKKYARDLTQA 173
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP +
Sbjct: 174 AREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPES 233
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D +L++LD+GA+VAGAKYRGEFEERLKAVL+EV AEG +ILFIDE+H ++GAG+ +G
Sbjct: 234 LKDKKLLSLDLGAMVAGAKYRGEFEERLKAVLQEVTSAEGGIILFIDEMHTLIGAGKADG 293
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA+NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ V+V+EP+V DT+SILR
Sbjct: 294 AMDASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILR 353
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKEKYE HHG+RI D ALV AA LS RYIT R LPDKAIDLVDEA A +++Q+DS+PEE
Sbjct: 354 GLKEKYELHHGIRIADSALVAAATLSNRYITDRFLPDKAIDLVDEAAARLKMQVDSKPEE 413
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D+L+R+ ++L+IE AL+KE D SK+RL + +L DL K L +++ EK ++ +
Sbjct: 414 LDSLDREIIRLKIEQEALKKETDAGSKSRLQTLEGDLVDLEKKSADLTSKWQAEKSKLSD 473
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETV 532
++LK + E+L L A+R+ + RA +L YG I ++E + +E E+ + E V
Sbjct: 474 AQKLKSELEQLRTELANAQRKGEYQRAGELAYGRIPDLEKRLAAVE---VTEDPSIDEAV 530
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
D IA+VVSRWTG+PV ++ + EK++L IG A+AV AV+ +V R+RAGL
Sbjct: 531 TADSIAQVVSRWTGVPVDKMLEGEKDKLLRMEDMLGKRVIGQAQAVRAVSTAVRRARAGL 590
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTEL KALAE LFDDE LVR+DMSEYME+HSV+RLIGAPP
Sbjct: 591 QDPNRPIGSFMFLGPTGVGKTELTKALAEYLFDDETALVRMDMSEYMEKHSVARLIGAPP 650
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRN
Sbjct: 651 GYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRN 710
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+IIMTSN+GAE L++ G+ T V RDQV+ VR HFRPE LNR+DEI++F L +
Sbjct: 711 TLIIMTSNIGAEFLVNQPEGEDTGAV-RDQVMGMVRTHFRPEFLNRIDEIILFHRLQKSE 769
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ +Q + L +R + L + D + + +DP YGARP++R +++ V L+
Sbjct: 770 MGKIVEIQFNRLRGLLEDRKIDLVLDAKGRDWLAEKGWDPAYGARPLKRVIQRSVQDPLA 829
Query: 822 RMLVREEIDENSTVYIDASPKG 843
M++ ++ + +TV I A G
Sbjct: 830 EMILAGDVRDGATVKISAGKSG 851
>gi|209883928|ref|YP_002287785.1| ATP-dependent chaperone ClpB [Oligotropha carboxidovorans OM5]
gi|337742364|ref|YP_004634092.1| chaperone protein ClpB [Oligotropha carboxidovorans OM5]
gi|386031329|ref|YP_005952104.1| chaperone protein ClpB [Oligotropha carboxidovorans OM4]
gi|209872124|gb|ACI91920.1| ATP-dependent chaperone ClpB [Oligotropha carboxidovorans OM5]
gi|336096395|gb|AEI04221.1| chaperone protein ClpB [Oligotropha carboxidovorans OM4]
gi|336100028|gb|AEI07851.1| chaperone protein ClpB [Oligotropha carboxidovorans OM5]
Length = 877
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/861 (53%), Positives = 607/861 (70%), Gaps = 27/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MN +K+T + I A LA GH QF+PLH+ LL D G+ I+ AGG + A
Sbjct: 1 MNIEKYTDRVKGFIQSAQSLALREGHQQFSPLHILKVLLDDSEGLSGGLIDRAGGNSRAI 60
Query: 60 -QSAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
Q+ E QA+ KLP + +I + + A+ A + GD+ + V++L+L L
Sbjct: 61 LQATE----QALAKLPKVSGGGAGQIYLAPETARAFSAAEQAAEKAGDSFVTVERLLLAL 116
Query: 118 LED--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
D S+ G L + GV + + + LR +GR +SAS + + ALK Y RDL + A
Sbjct: 117 SLDKESEAGKLLAQGGVTPQNLNAAINALR--KGRTADSASAENAYDALKKYARDLTQAA 174
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP +L
Sbjct: 175 RDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESL 234
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +L+ALD+GAL+AGAKYRGEFEERLKAVL+EV AEG ++LFIDE+H ++GAG+ +G+
Sbjct: 235 KDKKLLALDLGALIAGAKYRGEFEERLKAVLQEVTAAEGGIVLFIDEMHTLIGAGKADGA 294
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA+NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRG
Sbjct: 295 MDASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRG 354
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKEKYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA A +++Q+DS+PEE+
Sbjct: 355 LKEKYELHHGVRIADSALVAAATLSNRYITDRFLPDKAIDLVDEAAARLKMQIDSKPEEL 414
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D+L+R+ ++L+IE AL+KE D SK+RL + +L +L K L +++ EK ++ +
Sbjct: 415 DSLDREIVRLKIEQEALKKETDAGSKSRLQTLETDLAELEKKSADLTSKWQSEKSKLSDA 474
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVG 533
++LK + E+ L A+R+ + RA +L YG I E+E + +E ++S + E V
Sbjct: 475 QKLKSELEQARTELANAQRKGEYQRAGELAYGRIPELEKKLAAVEASESTST--IDEAVT 532
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
D IA+VVSRWTG+PV ++ + EK +R+IG A+AV AV+ +V R+RAGL
Sbjct: 533 ADNIAQVVSRWTGVPVDKMLEGEKDKLLRMEEMLGQRVIGQAQAVRAVSTAVRRARAGLQ 592
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTEL KALAE LFDDE LVR+DMSEYME+HSV+RLIGAPPG
Sbjct: 593 DPNRPIGSFMFLGPTGVGKTELTKALAEYLFDDETALVRMDMSEYMEKHSVARLIGAPPG 652
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 653 YVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNT 712
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IIMTSN+GAE L++ G+ T V RDQV+ VR HFRPE LNR+DEI++F L ++
Sbjct: 713 LIIMTSNIGAEFLVNQPEGEDTGAV-RDQVMGMVRTHFRPEFLNRIDEIILFHRLQKSEM 771
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++ +Q+ + L +R + L + A D + + +DP YGARP++R +++ V L+
Sbjct: 772 GRIVDIQLNRLRKLLEDRKIELHLDAKARDWLAEKGWDPAYGARPLKRVIQRSVQDSLAE 831
Query: 823 MLVREEIDENSTVYIDASPKG 843
M++ E+ + +TV I A G
Sbjct: 832 MVLAGEVLDGATVKISAGKTG 852
>gi|170761667|ref|YP_001785749.1| clpB protein [Clostridium botulinum A3 str. Loch Maree]
gi|169408656|gb|ACA57067.1| clpB protein [Clostridium botulinum A3 str. Loch Maree]
Length = 866
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/867 (51%), Positives = 618/867 (71%), Gaps = 25/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K +AI + +A H Q +HL AL+S G+ + G
Sbjct: 1 MDIEKLTLKVQQAINDSQLVAVKYNHQQIDTIHLFSALISQDDGLIPNILGKMGVNIRDI 60
Query: 61 SAE--RVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+AE RV + M K+ + + + +V +A+ K D++++V+ ++L ++
Sbjct: 61 NAETNRVLDN-MPKVLGEGAQSSSVYPTRRFEEVFVKAEQIAKDFKDSYISVEHVLLAIM 119
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ + + + ++ GV + + +RG + +V+S + T++AL YGR+LVE+A
Sbjct: 120 DVDKNNVYPILEKFGVKKSEFLKALSAVRGSQ--RVDSQDPEGTYEALVKYGRNLVEEAK 177
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP +L
Sbjct: 178 KHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPESLK 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG++ILFIDEIH ++GAG+TEGSM
Sbjct: 238 NKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGRIILFIDEIHTIVGAGKTEGSM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V EP+V DTVSILRGL
Sbjct: 298 DAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVITDEPTVEDTVSILRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E +HG+RI D A+V AA+LS+RYIT R+LPDKAIDL+DEACA +R +DS P E+D
Sbjct: 358 KERFEIYHGIRIHDSAIVAAAKLSSRYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+++RK QLEIE AL KEKD ASK RL + +EL +L++K + + +Y+ EK I +IR
Sbjct: 418 SMKRKIFQLEIEKEALSKEKDVASKERLEVLERELSELKEKDKEMTAKYENEKSHITKIR 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG---NQSDENLMLTET 531
LK++ +++ +++AER YDL + A+L+YG I ++ I + E S+ N ML E
Sbjct: 478 DLKERLDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIRENSNGNAMLKEE 537
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
V +I+E++S+WTGIPVTRL + E++ R+IG EAV AV +V+R+RAG
Sbjct: 538 VTEQEISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME++SVSRLIGAP
Sbjct: 598 LKDPRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEENIIRIDMSEYMEKYSVSRLIGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+ +DF+
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKVIDFK 717
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSNLG+ +LL + + R +V + ++ F+PE LNR+D+I++F PL+ E
Sbjct: 718 NTIIIMTSNLGSNYLLDNESKEGIDESVRTRVKEALKARFKPEFLNRVDDIIMFKPLTVE 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++++ + + D+ RL ++ + L +TD+A DI+ E YDPIYGARP++R++E + TE+
Sbjct: 778 DIKRIIDIFLDDIRKRLKDKNIQLRITDSAKDIMAKEGYDPIYGARPLKRYIEDTIETEI 837
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLV 847
++ ++ I E +TV +D KG+++V
Sbjct: 838 AKQIIAGNIYEGTTVGVDL--KGESIV 862
>gi|146343231|ref|YP_001208279.1| chaperone [Bradyrhizobium sp. ORS 278]
gi|146196037|emb|CAL80064.1| Chaperone [Bradyrhizobium sp. ORS 278]
Length = 879
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/864 (53%), Positives = 608/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK+T + I A LA GH QF+PLHL LL D G+ I+ AGG + A
Sbjct: 1 MNIDKYTERARGFIQSAQSLAVRDGHQQFSPLHLLKVLLDDSEGLAGGLIDRAGGNSRA- 59
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ A+ K+P + +I S L + A+ A + GD+ + V++L+LGL
Sbjct: 60 -ILKATEDALGKMPKVSGSGAGQIYLSPELARAFDAAEKAAEKAGDSFVTVERLLLGLTL 118
Query: 120 D--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D S+ G + + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 DAKSETGSILAKGGVTAQNLNAAIESLR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
RL++LD+GAL+AGAKYRGEFEERLKAVL+EV AEG +LFIDE+H ++GAG+ +G+MD
Sbjct: 237 KRLLSLDLGALIAGAKYRGEFEERLKAVLQEVTAAEGTFVLFIDEMHTLIGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EY+K+VEKDAA RRFQ VYV EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPVYVTEPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV +A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ ++L+IE AL+KE D SK RL + KEL DL +K L ++ EK+++ ++
Sbjct: 417 LDREIIRLKIEQEALKKESDLGSKTRLQALEKELADLEEKSASLTAKWSAEKDKLSNAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + +A +L YG I E+E + +E ++ M+ E V +
Sbjct: 477 LKSELDGLRIELANAQRRGEYQKAGELAYGRIPELEKRLADIEAKETSGE-MMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EK++L +G EAV+AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKDKLLRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T +V R+ V+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSEFLVNQPEGEDTSEV-RELVMGTVRGHFRPEFLNRVDEIILFHRLQKSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L ER + L++ A D + A+ +DP YGARP++R +++ V L+ M+
Sbjct: 775 IVEIQFSRLQKLLEERKITLSLDGDARDWLAAKGWDPAYGARPLKRVIQRSVQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ +I + V I S +G+ L +
Sbjct: 835 LAGDIKDGDKVAI--SSEGNVLTF 856
>gi|427419377|ref|ZP_18909560.1| ATP-dependent chaperone ClpB [Leptolyngbya sp. PCC 7375]
gi|425762090|gb|EKV02943.1| ATP-dependent chaperone ClpB [Leptolyngbya sp. PCC 7375]
Length = 868
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/869 (51%), Positives = 629/869 (72%), Gaps = 27/869 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE-NAAQ 60
NP++FT + AIA +LA H Q HL +ALL + G+ ++ AG NA +
Sbjct: 5 NPNQFTERAWAAIAATTDLAKQWQHQQIETEHLMLALL-EQDGLASRIFQKAGASINALR 63
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
SA F ++K P T D I +L ++ A +K D +++++ L+L ED
Sbjct: 64 SATEAF---LRKQPQVTGQSDNIYLGRSLNTLLDNADVFRKEFDDDYISIEHLLLVYPED 120
Query: 121 SQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
++ G L +EAG+ ++K+ V+++RG + KV + + ++AL+ YGRDL E A G+
Sbjct: 121 TRFGKSLLREAGINTKQLKNAVKQVRGHQ--KVTDQNPEGKYEALEKYGRDLTEYAREGR 178
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EG+AQRI+ DVP +L D +
Sbjct: 179 LDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGMAQRIINNDVPQSLRDRK 238
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
LIALDMGAL+AGAKYRGEFEERLKAVLKEV +++G+++LFIDEIH V+GAG T+G+MDA
Sbjct: 239 LIALDMGALIAGAKYRGEFEERLKAVLKEVTDSQGQIVLFIDEIHTVVGAGATQGAMDAG 298
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KPMLARG+LRCIGATTL+EYR+Y+EKDAA ERRFQQVY+ +P+VPDT+SILRGLKE+
Sbjct: 299 NLLKPMLARGELRCIGATTLDEYRQYIEKDAALERRFQQVYIDQPTVPDTISILRGLKER 358
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGV I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++
Sbjct: 359 YELHHGVTIADNALVAAATLSTRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVD 418
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK +QLE+E +L+ E D S RL + +EL +L+++ L +++ EK+ ID+I+ +K
Sbjct: 419 RKILQLEMERLSLKNETDAGSIERLERLERELANLKEEQSTLNAQWQSEKDGIDQIQVIK 478
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG----NQSDENLMLTETVG 533
++ + + + +AER YD RAA+L+YG + E++ + Q E +Q+ +L E V
Sbjct: 479 EEIDRVNIEIAQAERDYDYNRAAELKYGKLNELQEKVSQAEKQLAESQASGRTLLREEVS 538
Query: 534 PDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLG 582
+ IAE++S+WTGIP+++L Q+E +R+IG EAV AVA+++ RSRAGL
Sbjct: 539 EEDIAEIISKWTGIPISKLVQSEMHKLLLLEDELHKRVIGQEEAVTAVADAIQRSRAGLA 598
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +PT SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+H+VSRLIGAPPG
Sbjct: 599 DPNRPTASFIFLGPTGVGKTELAKALASYLFDTEEAIVRIDMSEYMEKHAVSRLIGAPPG 658
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF+N+
Sbjct: 659 YVGYDEGGQLTEALRRRPYSVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGRTVDFKNS 718
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
VIIMTSN+G++ +L + R +V+ +R FRPE LNR+DE+++F L QL
Sbjct: 719 VIIMTSNIGSQFILDVAGDDSRYEEMRTRVMDVLRSSFRPEFLNRVDEMIIFHSLQKSQL 778
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
R++ +LQ++ + RLA++ + L+++++ALD + YDP+YGARP++R +++++ T +++
Sbjct: 779 REIVKLQVQALEKRLADQKIGLSLSESALDFLADVGYDPVYGARPLKRAIQRELETAIAK 838
Query: 823 MLVREEIDENSTVYIDASPKGDNLVYRVQ 851
++R + TV +D + + LV++V+
Sbjct: 839 SILRGDYKGGDTVVVDV--ENERLVFKVK 865
>gi|238917187|ref|YP_002930704.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Eubacterium
eligens ATCC 27750]
gi|238872547|gb|ACR72257.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Eubacterium
eligens ATCC 27750]
Length = 865
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/857 (52%), Positives = 608/857 (70%), Gaps = 26/857 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG--GENA 58
MN +KFT K+ EA+ ++A G+ + H +LL+ + A I G +
Sbjct: 1 MNINKFTQKSIEAVNQCEKIAYDYGNQEIDQEHFLYSLLTIEDSLIASLIEKMGIDKDTF 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
++ E + +Q K ++ S L KV+ A+ K GD +++V+ L+L ++
Sbjct: 61 IKNIETLLSQKNK-----VSGNVQLYVSNDLNKVLVNAEDEAKRMGDAYVSVEHLMLAMI 115
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ I LFK G+ S + +RG + V S + + T+ L Y DLVE+A
Sbjct: 116 AAPNKGIKQLFKTYGINRESFLSALATVRGNQS--VTSDNPEATYDTLSKYATDLVERAK 173
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L
Sbjct: 174 DGKLDPVIGRDNEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLK 233
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +L ALDMGALVAGAKYRGEFEERLKAVL EV+++EG++ILFIDEIH ++GAG+TEG+M
Sbjct: 234 DKKLFALDMGALVAGAKYRGEFEERLKAVLDEVKKSEGQIILFIDEIHTIVGAGKTEGAM 293
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+E+R+Y+EKD A ERRFQ V V EP+V DT+SILRGL
Sbjct: 294 DAGNMLKPMLARGELHCIGATTLDEHREYIEKDPALERRFQPVMVDEPTVEDTISILRGL 353
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
K++YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 KDRYEVFHGVKITDGALVSAATLSDRYISDRFLPDKAIDLVDEACAMIKTELDSMPAELD 413
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
RK MQLEIE AL+KE D SK RL ++KEL +LR ++ EK +D++
Sbjct: 414 EKRRKIMQLEIEEAALKKETDNLSKERLDALQKELSELRSDFNIQKAKWDSEKSSVDQVS 473
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVG 533
+LK++ +++ + +A+R YDL +AA+L+YG + + + A+ + E S+ ++ L E+V
Sbjct: 474 KLKEEIDQINTQIAQAKREYDLNKAAELQYGKLPQAQKALEEAEKKSSNRDMSLVHESVT 533
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
++IA+++SRWTGIPV++L ++E++ R+IG E V V E+++RS+AG+
Sbjct: 534 EEEIAKIISRWTGIPVSKLSESERQKTLNLDEQLHKRVIGQDEGVTKVTEAIIRSKAGIK 593
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAKALAE LFDDE+ +VR+DMSEYME++SVSRLIGAPPG
Sbjct: 594 DPTKPIGSFLFLGPTGVGKTELAKALAESLFDDESNIVRLDMSEYMEKYSVSRLIGAPPG 653
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT
Sbjct: 654 YVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNT 713
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IIMTSN+G+ +LL G+ +++ A + V+ +++ HFRPE LNRLDEI++F PL+ +
Sbjct: 714 IIIMTSNIGSSYLLEGINPDGSIKPEAEEAVMGDLKNHFRPEFLNRLDEIIMFKPLTKDN 773
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L + DV RLA++ + + +TDAA D ++ +DP+YGARP++R+++K V T +
Sbjct: 774 ISNIINLLVADVNKRLADKELEIVLTDAAKDFIVENGFDPMYGARPLKRYVQKTVETLAA 833
Query: 822 RMLVREEIDENSTVYID 838
++++ I+ + ID
Sbjct: 834 KLILAGNINTGDDIVID 850
>gi|424826476|ref|ZP_18251361.1| clpB protein [Clostridium sporogenes PA 3679]
gi|365980921|gb|EHN16938.1| clpB protein [Clostridium sporogenes PA 3679]
Length = 866
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/867 (51%), Positives = 619/867 (71%), Gaps = 25/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K +AI + +A H Q +HL AL+S G+ + G
Sbjct: 1 MDIEKLTLKVQQAINDSQLVAVKYNHQQIDTIHLFSALISQDDGLIPNILGKMGVNIREI 60
Query: 61 SAE--RVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ E RV + +M K+ + + + +V +A++ K D++++V+ ++L ++
Sbjct: 61 NGETNRVLD-SMPKVLGEGAQSSSVYPTRRFEEVFVKAESIAKDFKDSYISVEHVLLAIM 119
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ + + + ++ GV + + +RG ++V++ + T++AL YGR+LVE+A
Sbjct: 120 DVDKNNVLPILEKFGVKKSEFLKALSAVRG--SQRVDTQDPEGTYEALVKYGRNLVEEAK 177
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP +L
Sbjct: 178 KHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPESLK 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG++ILFIDEIH ++GAG+TEGSM
Sbjct: 238 NKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGRIILFIDEIHTIVGAGKTEGSM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V EP+V DTVSILRGL
Sbjct: 298 DAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVITDEPTVEDTVSILRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E +HG+RI D A+V AA+LS+RYIT R+LPDKAIDL+DEACA +R +DS P E+D
Sbjct: 358 KERFEIYHGIRIHDSAIVAAAKLSSRYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+++RK QLEIE AL KE+D ASK RL + KEL +L++K + + +Y+ EK I +IR
Sbjct: 418 SMKRKIFQLEIEKEALSKERDVASKERLEALEKELSELQEKDKEMTAKYENEKSHITKIR 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTET 531
LK+K +++ +++AER YDL + A+L+YG I ++ I + E S+ N ML E
Sbjct: 478 DLKEKLDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEE 537
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V +I+E++S+WTGIPVTRL + E+++L IG EAV AV +V+R+RAG
Sbjct: 538 VTEQEISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQREAVKAVTNAVIRARAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME++SVSRLIGAP
Sbjct: 598 LKDPRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEENIIRIDMSEYMEKYSVSRLIGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+ +DF+
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKVIDFK 717
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSNLG+ +LL + + R +V + ++ F+PE LNR+D+I++F PL+ E
Sbjct: 718 NTIIIMTSNLGSNYLLDNESKEGIDESVRVRVKEALKARFKPEFLNRVDDIIMFKPLTVE 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++K+ + + D+ RL ++ + L +TD+A DI+ E YDPIYGARP++R++E + TE+
Sbjct: 778 DIKKIIDIFLDDIRKRLKDKNINLKITDSAKDIMAKEGYDPIYGARPLKRYIEDTIETEI 837
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLV 847
++ ++ I E +T+ +D KG+++V
Sbjct: 838 AKQIIAGNIYEGTTIGVDI--KGESIV 862
>gi|282896326|ref|ZP_06304348.1| Chaperone protein clpB 2 [Raphidiopsis brookii D9]
gi|281198822|gb|EFA73701.1| Chaperone protein clpB 2 [Raphidiopsis brookii D9]
Length = 871
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/866 (51%), Positives = 619/866 (71%), Gaps = 25/866 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA ++A Q HL ALL AI G N +
Sbjct: 5 NPNQFTEKAWEAIAHTPDIAKQYEQQQLESEHLMKALLEQDG--LGNAIFTKAGTNIKKI 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ Q + + P + + +L ++ RA+ ++ D +++V+ ++LG +D
Sbjct: 63 TDYT-EQFIIRQPKVSGTSTSVYLGRSLDTLLDRAEKYRQEFKDEYVSVEHILLGYCKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G +L +E G+ A++K+ ++++RG + KV S + +Q+L+ YGRDL E A G+L
Sbjct: 122 RFGKNLLRETGLDEAKLKNIIKQIRGSQ--KVTDQSPEGKYQSLEKYGRDLTEAAKKGQL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKEV E+ G ++LFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P VPDT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPDVPDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D +LV AA LS+RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVRISDSSLVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + KEL DL+++ L ++++ EK+ I +I+ +K+
Sbjct: 420 KILQLEMEKLSLQKESDLASRERLERLEKELADLKEEQAVLRVQWQSEKDIITKIQSIKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE----GNQSDENLMLTETVGP 534
+++ +Q+A+R + RA++L YG + E++ + +E Q +L E V P
Sbjct: 480 DIDKINLEIQQAQRITNYERASELIYGKLPELQEQLENIETELANTQRTGKSLLREEVTP 539
Query: 535 DQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRAGLGR 583
IAEV+S+WTGIP+++L ++ +R++G AEAV AVA+++ RSRAGL
Sbjct: 540 GDIAEVISKWTGIPISKLVESEKEKLLHLEEELHQRVVGQAEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA +FD E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFIFLGPTGVGKTELAKALAAYMFDTEESLVRIDMSEYMEKHTVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTE +RRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QGRTVDF+NT+
Sbjct: 660 VGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDSQGRTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L R +V++ +R FRPE LNR+DEI++F L +LR
Sbjct: 720 IIMTSNIGSQYILDVAGDDSRYDEMRHRVMETMRNSFRPEFLNRIDEIIIFHSLQKSELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
K+ +LQ++ + RL +R ++L ++ +ALD + YDP++GARP++R L++++ T++++
Sbjct: 780 KIVQLQVERLTQRLTDRKMSLELSGSALDFLAEVGYDPVFGARPLKRALQRELETQIAKA 839
Query: 824 LVREEIDENSTVYIDASPKGDNLVYR 849
++R E DE +++D + + L +R
Sbjct: 840 ILRGEFDEGDRIFVDV--QNERLAFR 863
>gi|359462099|ref|ZP_09250662.1| chaperone ClpB [Acaryochloris sp. CCMEE 5410]
Length = 874
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/869 (50%), Positives = 627/869 (72%), Gaps = 31/869 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA-- 59
N D+FT K AI +LA A Q HL AL+ D G+ Q AG +
Sbjct: 5 NHDQFTEKAWAAIVRTSDLAKEAQQQQIESEHLLQALVKD-DGLAGQIFTKAGTDVQRVR 63
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
++ E + QA PS++ + +L + RA++ +++ GD ++++ L+LG +
Sbjct: 64 DRTTEFINRQAKLTSPSES-----VYLGRSLDTLFDRAESFRRSLGDDFISIEHLVLGYI 118
Query: 119 EDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
ED + G L + G+ +K V +RG KV + + +++L+ YGRDL E A
Sbjct: 119 EDDRFGQPLLQGLGITEQMLKQAVTDIRG--SHKVTDKNPEGKYESLEKYGRDLTELARE 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV DVP +L D
Sbjct: 177 GKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVARDVPESLRD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LIALDMG+L+AGAKYRGEFEERLK+VLKEV E++G +ILFIDEIH V+GAG ++G+MD
Sbjct: 237 RKLIALDMGSLIAGAKYRGEFEERLKSVLKEVTESDGLMILFIDEIHTVVGAGASQGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVY+ +P++ DTVSILRGLK
Sbjct: 297 AGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYIDQPNIQDTVSILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGV+I D ALV AA LS RYI+ R LPDKAIDL+DEA A +++++ S+PEE+D
Sbjct: 357 ERYEVHHGVKISDNALVAAATLSTRYISDRFLPDKAIDLMDEAAAKLKMEITSKPEELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +LEKE D+AS RL + +E+ +L++ + L +++ EK+ ID+I+
Sbjct: 417 IDRKILQLEMERLSLEKESDRASLERLERIEQEIANLQEDQKTLNAQWQSEKQIIDDIQT 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTET 531
+K++ + + +Q+AER YDL AA+L+YG + +++E+A QL Q++ N +L E
Sbjct: 477 IKEEIDRVNIEIQQAERNYDLNHAAELKYGKLTNLQRQLESAETQLAQRQTNTNSLLREE 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
V IAE++S+WTGIPV++L +E E R+IG EAV AV++++ RSRAG
Sbjct: 537 VTDADIAEIISKWTGIPVSKLVASEMEKLLHLEDELHQRVIGQEEAVTAVSDAIQRSRAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P SF+FLGPTGVGKTEL KALA LFD E+ +VRIDMSEYME+H+V+R+IGAP
Sbjct: 597 LADPNRPIASFIFLGPTGVGKTELGKALAAYLFDTEDAMVRIDMSEYMEKHTVARMIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG++EGGQLTEAVRRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF+
Sbjct: 657 PGYVGYDEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGRTVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
N VIIMTSN+G++H+L +++V+ +R HFRPE LNR+DE+++F L +
Sbjct: 717 NAVIIMTSNIGSQHILDLAGDDSRYSEMQNRVMDAMRSHFRPEFLNRIDELIIFRSLRKD 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
QLR++ +LQ++ +A RL++R ++L ++++ALD + YDP+YGARP++R +++++ T++
Sbjct: 777 QLRRITQLQVQRLAKRLSDRKMSLKLSESALDFLAEVGYDPVYGARPLKRAIQRELETQI 836
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYR 849
++ ++R + E T++ D + + L+++
Sbjct: 837 AKAILRGDFGEGDTIFADV--ENERLIFK 863
>gi|449477540|ref|XP_004155052.1| PREDICTED: chaperone protein ClpB1-like [Cucumis sativus]
Length = 752
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/724 (60%), Positives = 568/724 (78%), Gaps = 18/724 (2%)
Query: 163 ALKTYGRDLVEQAGK--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGL 220
AL+TYG DLVE+A K LDP+ GR +EIRR++ IL R+TK NP+LIGEPGVGKTA+VE L
Sbjct: 5 ALETYGHDLVEKAEKQTLDPIFGRHKEIRRLLTILCRKTKCNPILIGEPGVGKTAIVEAL 64
Query: 221 AQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDE 280
AQ+ G+VP+ L+ R++ LDMGA++AG +RG+ EERLK V+ EV+ +EGKVI+FIDE
Sbjct: 65 AQKFSAGNVPAKLSGARIVELDMGAIMAGTIWRGQLEERLKDVMTEVKGSEGKVIVFIDE 124
Query: 281 IHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVA 340
IH+++ R++ AA + KP L RG RCIGATTL+EY++Y+EKD A RRF+QVYV
Sbjct: 125 IHMLV---RSDHQGTAAEILKPALGRGGFRCIGATTLKEYKRYIEKDGALARRFKQVYVN 181
Query: 341 EPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACA 400
EPSV D+++ILR LKE+YE HH + I+D AL+ AA+LS RYITGR LPDKAIDLVDEA A
Sbjct: 182 EPSVEDSINILRVLKERYEKHHVLIIKDSALIAAAKLSHRYITGRRLPDKAIDLVDEASA 241
Query: 401 NVRVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLM 460
+RVQLD+Q EE+ L+ ++ +LE E++ALEKE+DKAS+ARL + +KEL+D+ ++LQPL+
Sbjct: 242 CMRVQLDTQSEELYELQNEKSKLEAEVNALEKEEDKASQARLPQAKKELNDVNNQLQPLL 301
Query: 461 MRYKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN 520
+Y+K+K ++++ +LKQK++E+L +Q A++R DL RAADLR + +VE IG +E
Sbjct: 302 SKYQKQKSEMEKLTKLKQKKQEILVEIQAAQKRKDLIRAADLRRQKLDDVELKIGDVERR 361
Query: 521 QSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNA 569
+ +TVGP++IA+ VSRWTG+PV+RL EKE ++GLA EAV++
Sbjct: 362 IRKHGFIEKDTVGPEEIADEVSRWTGVPVSRLTGEEKEWVMGLAGRLKKRVVGQNEAVDS 421
Query: 570 VAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYME 629
VAE+V+R RAGL P QP GSFLFLGP+GVGKTELAK LA +LF+DEN +VRIDMSEYME
Sbjct: 422 VAEAVMRFRAGLALPNQPNGSFLFLGPSGVGKTELAKGLAHELFNDENRMVRIDMSEYME 481
Query: 630 QHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRL 689
+HSVSRLIG+PPGYVG+ EGGQLTE V+RRPY VVL DEVEKAH+ V N LLQVLDDGRL
Sbjct: 482 KHSVSRLIGSPPGYVGYHEGGQLTEPVKRRPYCVVLLDEVEKAHVDVLNILLQVLDDGRL 541
Query: 690 TDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLD 749
TDGQG TVDFRNTVIIMTSNLGA HLLS MQVAR++V+Q+V++HF+PE +NRLD
Sbjct: 542 TDGQGSTVDFRNTVIIMTSNLGAGHLLSEKY--CPMQVARERVIQKVKEHFKPEFVNRLD 599
Query: 750 EIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIR 809
EI++F PL Q R+V + MKDVA RL+E+G+A+AVT +ALD VL +S+DP+YGARPIR
Sbjct: 600 EILIFRPLPKNQQRRVTKSMMKDVARRLSEKGIAMAVTKSALDFVLDQSFDPVYGARPIR 659
Query: 810 RWLEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLI 869
RWLEKKVVT +S+ML++EEI E TVY+DA+ G +L + V+KN G +D + + ++LI
Sbjct: 660 RWLEKKVVTNISKMLMKEEIGEEYTVYVDANDGGKDLKFNVEKNNGLIDGISDGRYEILI 719
Query: 870 QIPN 873
QIP
Sbjct: 720 QIPT 723
>gi|254500302|ref|ZP_05112453.1| ATPase, AAA family [Labrenzia alexandrii DFL-11]
gi|222436373|gb|EEE43052.1| ATPase, AAA family [Labrenzia alexandrii DFL-11]
Length = 865
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/865 (52%), Positives = 613/865 (70%), Gaps = 23/865 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + + A A GH QFTP H+ LL DP G+ + I+ AGG+ A
Sbjct: 1 MNFEKYTERARGFVQSAQTFALGRGHQQFTPEHVLKVLLDDPEGMASGLISRAGGDAKAL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
+ + K+P + ++ ++ +A+ GD+ + V++L+L L
Sbjct: 61 KGD--LEGILDKMPKVSGGTGQLYMHQATARLFDQAEKIADKAGDSFVTVERLLLALAMD 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
DS+ G LFK G+ + V +LR +GR +SA+ + ++ALK Y RDL E A G
Sbjct: 119 ADSEAGKLFKRHGITPNALNEAVNQLR--QGRTADSATAENQYEALKKYARDLTEVARDG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLK+VL EVE A G ++LFIDE+H ++GAG+ +G+MDA
Sbjct: 237 QLLALDMGALIAGAKYRGEFEERLKSVLSEVEAAAGGIVLFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V EP+V DTVSILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVTEPTVEDTVSILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D A+V AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D L
Sbjct: 357 KYELHHGVRITDSAIVSAASLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL+ E D+A++ RL ++ +EL DL ++ Q L R+ EKE+++ +++
Sbjct: 417 DRRIIQLKIEREALKTESDEAAQDRLGKLERELTDLEEQSQTLTSRWLGEKEKLNLEQKI 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ E+ L+ A+R+ DLA+A +L YG + ++E + E + D + M+ E V P
Sbjct: 477 KEQLEQARIDLEIAQRQGDLAKAGELAYGVVPDLERKLADAEAFE-DGDAMVDEAVTPSH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA+VVS+WTGIPV ++ + E+E+L IG +EA++AV+ +V R+RAGL P
Sbjct: 536 IAQVVSKWTGIPVDKMLEGEREKLLRMEDVLAGRVIGQSEAIHAVSTAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDD++ +VRIDMSEYME+HSV+RLIGAPPGYVG
Sbjct: 596 RPIGSFMFLGPTGVGKTELTKALASFLFDDDSAMVRIDMSEYMEKHSVARLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 656 YEEGGALTEAVRRRPYQVVLFDEIEKAHSDVFNVLLQVLDDGRLTDGQGRTVDFRNTLII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLG+E L++ G+ + V R +V+ VR HFRPE LNRLDEIV+F L Q+ +
Sbjct: 716 MTSNLGSEFLVNQPEGEDSDAV-RTEVMSVVRGHFRPEFLNRLDEIVLFHRLQRSQMSAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
++Q++ + L +R + L + D AL + + YDP YGARP++R ++K V L+ L+
Sbjct: 775 VKIQLERLRGLLTDRKITLNLDDGALGWLAQKGYDPAYGARPLKRVIQKDVQDPLAEKLL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYRV 850
++ + TV + A D L++++
Sbjct: 835 AGDVLDGQTVNVSAGT--DRLLFQL 857
>gi|367477513|ref|ZP_09476863.1| Chaperone [Bradyrhizobium sp. ORS 285]
gi|365270192|emb|CCD89331.1| Chaperone [Bradyrhizobium sp. ORS 285]
Length = 879
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/864 (53%), Positives = 610/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK+T + I A LA GH QF+PLHL LL D G+ I+ AGG ++
Sbjct: 1 MNIDKYTERARGFIQSAQSLAVRDGHQQFSPLHLLKVLLDDGEGLAGGLIDRAGGN--SR 58
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ + A+ K+P + +I S L + A+ A + GD+ + V++L+LGL
Sbjct: 59 AILKATEDALGKMPKVSGSGAGQIYLSPELARAFDAAEKAAEKAGDSFVTVERLLLGLAL 118
Query: 120 D--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D S+ G L + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 DKNSETGGLLAKGGVTAQNLNAAIEALR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
RL++LD+GAL+AGAKYRGEFEERLKAVL+EV AEG +LFIDE+H ++GAG+ +G+MD
Sbjct: 237 KRLLSLDLGALIAGAKYRGEFEERLKAVLQEVTAAEGTFVLFIDEMHTLIGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EY+K+VEKDAA RRFQ VYV EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPVYVTEPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV +A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ ++L+IE AL+KE D SK RL + KEL DL +K L ++ EK+++ ++
Sbjct: 417 LDREIIRLKIEQEALKKESDLGSKTRLQALEKELADLEEKSASLTAKWSAEKDKLSNAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + +A +L YG I ++E + +E + + M+ E V +
Sbjct: 477 LKSELDALRIELANAQRRGEYQKAGELAYGRIPDLEKRLADIEAKE-NAGEMMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EK++L +G EAV+AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKDKLLRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T +V R+ V+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSEFLVNQPEGEDTSEV-RELVIGTVRGHFRPEFLNRVDEIILFHRLQKSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + +AER + L++ A D + A+ +DP YGARP++R +++ V L+ M+
Sbjct: 775 IVEIQFSRLQKLVAERKITLSLDGDARDWLAAKGWDPAYGARPLKRVIQRSVQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ +I + V I S +G+ L +
Sbjct: 835 LAGDIKDGDNVAI--SSEGNVLTF 856
>gi|297587903|ref|ZP_06946547.1| chaperone protein ClpB [Finegoldia magna ATCC 53516]
gi|297574592|gb|EFH93312.1| chaperone protein ClpB [Finegoldia magna ATCC 53516]
Length = 861
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/855 (50%), Positives = 610/855 (71%), Gaps = 24/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ +AI A A G+ + T +HL+ ALLSD I A+ I G + +
Sbjct: 1 MDLNKFTQKSVQAIQDAQNTAIKLGNPEVTDVHLSYALLSDSDSIVAKTIQKLGAD--YK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
FNQ + LP P ST +++ +A+ K+ GD+ ++V+ + + +L
Sbjct: 59 KIVSAFNQKIDSLPKNDSQSSVYP-STAFQRILLKAEDEAKSMGDSFVSVEHIFMSILGE 117
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+++ L K+ V S ++ LRG +KV+S + + T L YGR+L + A G
Sbjct: 118 KNTVSAVLLKDFNVNKQNFASNLKDLRG--NQKVDSDNPEDTTDVLTKYGRNLTDLAKEG 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIR VRILSRRTKNNPVLIG+PGVGKTA+VEGLA RIV DVP L +
Sbjct: 176 KLDPVIGRDDEIRHSVRILSRRTKNNPVLIGQPGVGKTAIVEGLALRIVNDDVPETLRNK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ ALDMG+L+AGAK+RGEFEERLKAVLKEV E++GK+I+FIDEIH ++GAG++EG+MDA
Sbjct: 236 SIFALDMGSLIAGAKFRGEFEERLKAVLKEVAESDGKIIMFIDEIHTLVGAGKSEGAMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
ANL KPMLARG++R IGATTL+EYRKY+E D A ERRFQ+V V EPSV DT+SILRG+K+
Sbjct: 296 ANLLKPMLARGEIRTIGATTLDEYRKYIETDGALERRFQKVLVEEPSVEDTISILRGIKD 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE +HG++I D A++ AA LS RYIT R LPDKAIDL+DEA A VR ++DS PE ID
Sbjct: 356 KYEIYHGIKITDNAVIAAATLSDRYITDRFLPDKAIDLMDEASAMVRTEIDSMPESIDET 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK +QLEIE AL KE D+ SK RL + KEL D +++ + M + ++K ++DEI+
Sbjct: 416 KRKILQLEIERAALNKEDDEMSKIRLENLEKELQDTKNEFDAMYMEWTQQKSKVDEIKDT 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS-DENLMLTETVGPD 535
K + E + ++EA+R+YD R ++L+YG + E+E + +L D+N ++ E+V D
Sbjct: 476 KSEIEAVKHEMEEAQRKYDFERLSELKYGKLVELENKLEELNKKMDEDDNSIIKESVTED 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRP 584
+IAEVVS+WT IPVT+L + E++ R++G EAV AV ++++R+R+GL
Sbjct: 536 EIAEVVSKWTSIPVTKLVETERDKILNMDKLLHKRVVGQDEAVTAVTDAIIRARSGLKSL 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTELAKAL E +FDDE L+RIDMSEYME+H+VSRL+GAPPGYV
Sbjct: 596 NRPIGSFIFLGPTGVGKTELAKALTENMFDDEKNLIRIDMSEYMEKHAVSRLVGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQVLDDGRLTD +GRTVDF+NT+I
Sbjct: 656 GYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFKNTII 715
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+ L+ G+ G ++ + +R+ V+ E++ F+PE LNR+D+IV+F PL+ + +
Sbjct: 716 IMTSNIGSMDLIEGIDDNGNISDE-SRNSVMDELKSRFKPEFLNRIDDIVMFKPLTKDDI 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
K+ Q+ + +L +R + + + ++A D+++ ++YD +YGARP++R++E V T+L R
Sbjct: 775 YKIIEKQVSLLQKQLEDRQITIEIDESAEDLIIDKAYDVLYGARPVKRFIESNVETKLGR 834
Query: 823 MLVREEIDENSTVYI 837
L++ + + TV I
Sbjct: 835 ELIKGTVTDKDTVVI 849
>gi|291564049|emb|CBL42865.1| ATPases with chaperone activity, ATP-binding subunit
[butyrate-producing bacterium SS3/4]
Length = 866
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/858 (52%), Positives = 614/858 (71%), Gaps = 28/858 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG--GENA 58
MN KFT K+ EA+ +LA G+ Q HL V+LL + + I G GE
Sbjct: 1 MNISKFTQKSVEAVQNCEKLAYEYGNQQIDQEHLLVSLLKLDDSLILKLITKMGISGEQF 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A AE A+KKLP + ++ + L KV+ A+ KA GD +++V+ L L LL
Sbjct: 61 ADEAE----AALKKLP-KVSGGGQVYLTQDLNKVLIDAEDEAKAMGDEYVSVEHLFLCLL 115
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ + + +LF+ G+ + + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 116 KQPNKAMKELFRTYGIDRNKFLQALSTVRGNQ--RVTSDNPEATYDTLNKYGSDLVEKAR 173
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K+DPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L
Sbjct: 174 DQKMDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLK 233
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +L +LDMGALVAGAKYRGEFEERLKAVL EV ++EG++ILFIDE+H ++GAG+TEGSM
Sbjct: 234 DKKLFSLDMGALVAGAKYRGEFEERLKAVLDEVRKSEGQIILFIDELHTIVGAGKTEGSM 293
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EP+V DT+SILRGL
Sbjct: 294 DAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVMVDEPTVEDTISILRGL 353
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
K++YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 KDRYEVYHGVKITDSALVAAATLSNRYISDRFLPDKAIDLVDEACAMIKTELDSMPTELD 413
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L RK MQLEIE AL+KE D S+ RL +++KEL +L D+ +++ EK +D++
Sbjct: 414 ELSRKIMQLEIEEAALKKETDHLSQERLADLQKELAELHDQFATQKAQWQNEKATVDKLS 473
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVG 533
++++ E + +Q+A+++YDL +AA+L+YG + ++E + + E + +L L E+V
Sbjct: 474 SIREEIEAVHRQIQDAQQKYDLNKAAELQYGKLPQLEKELKEEEEKVKNADLSLVHESVT 533
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
D+IA ++SRWTGIPV +L ++E+ +R++G EAV V ++++RS+AG+
Sbjct: 534 EDEIARIISRWTGIPVAKLTESERNKTLHLDDELHKRVVGQDEAVEKVTDAIIRSKAGIK 593
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAK LA LFDDEN +VRIDMSEYME++SVSRLIGAPPG
Sbjct: 594 DPTKPIGSFLFLGPTGVGKTELAKTLAASLFDDENNMVRIDMSEYMEKYSVSRLIGAPPG 653
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEAVRR+PY VVLFDE+EKAH VFN LLQVLDDGR+TD G+TVDF+NT
Sbjct: 654 YVGYDEGGQLTEAVRRKPYCVVLFDEIEKAHPDVFNVLLQVLDDGRITDSMGKTVDFKNT 713
Query: 703 VIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
+II+TSN+G+++LL G+ G + + A+ +V+ ++R HFRPE LNRLDE ++F PL+
Sbjct: 714 IIILTSNIGSQYLLDGIDENGDIRPE-AKAEVMNDLRSHFRPEFLNRLDETILFKPLTKN 772
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + L + D+ RLA++ + +A++D+A ++ YDP+YGARP++R+L+K V T
Sbjct: 773 NIGSIIDLLVADINKRLADKELVVALSDSAKQFIVDNGYDPVYGARPLKRYLQKNVETLA 832
Query: 821 SRMLVREEIDENSTVYID 838
+R+++ + + T+ ID
Sbjct: 833 ARLILSDGVHTGDTIRID 850
>gi|323694040|ref|ZP_08108222.1| ATP-dependent chaperone ClpB [Clostridium symbiosum WAL-14673]
gi|355625351|ref|ZP_09048214.1| chaperone ClpB 2 [Clostridium sp. 7_3_54FAA]
gi|323501896|gb|EGB17776.1| ATP-dependent chaperone ClpB [Clostridium symbiosum WAL-14673]
gi|354821378|gb|EHF05766.1| chaperone ClpB 2 [Clostridium sp. 7_3_54FAA]
Length = 860
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/858 (52%), Positives = 616/858 (71%), Gaps = 29/858 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ +LA G+ Q HL ++LL+ + + I G
Sbjct: 1 MNINKFTQKSLEAVQNTEKLAYEYGNQQIDQEHLLLSLLTIDDSLILKLITKMG-----I 55
Query: 61 SAERVFN---QAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S E+ N Q + KLP + ++ S KV+ A+ KA GD +++V+ L L +
Sbjct: 56 SGEQFVNEIVQNIGKLPKVSGG--QVYFSNDANKVLVNAEDEAKAMGDEYVSVEHLFLSM 113
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L+ + + DLF+ G+ + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 114 LKQPNRAVKDLFRLYGITKENFLQALSTVRGNQ--RVVSDNPEATYDTLNKYGYDLVERA 171
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD EIR VV ILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L
Sbjct: 172 RDQKLDPVIGRDSEIRNVVMILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGL 231
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +L ALDMGAL+AGAKYRGEFEERLKAVL EV++++G++ILFIDE+H ++GAG+TEGS
Sbjct: 232 KDKKLFALDMGALMAGAKYRGEFEERLKAVLDEVKKSDGQIILFIDELHTIVGAGKTEGS 291
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA N+ KPMLARG+L CIGATTL+EYRKY+EKDAA ERRFQ V V EP+V DT+SILRG
Sbjct: 292 MDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDAALERRFQPVRVDEPTVEDTISILRG 351
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ ++DS P E+
Sbjct: 352 LKERYEVYHGVKITDSALVSAAVLSDRYISDRFLPDKAIDLVDEACAMIKTEMDSMPAEM 411
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L R+ MQLEIE AL+KE D+ SK RL +++KEL +LRD +++ EK +D++
Sbjct: 412 DELSRRIMQLEIEEAALKKETDRLSKDRLEDLQKELAELRDSFSSQKAQWENEKSSVDKL 471
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETV 532
+L+++ E + +Q A++ YDL RAA+L+YG + E++ + + E +++ L E+V
Sbjct: 472 SKLREEIEHINGEIQAAQQAYDLNRAAELQYGKLPELKKQLEEEEARVKSQDMSLVHESV 531
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
++IA ++S+WTGIPV +L ++E+ +R+IG EAV V E+V+RS+AG+
Sbjct: 532 TDEEIARIISKWTGIPVAKLTESERSKTLHMDEILHKRVIGQDEAVTKVTEAVIRSKAGI 591
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTELAKALAE LFDDEN +VRIDMSEYME+HSVSRLIGAPP
Sbjct: 592 KDPTKPIGSFLFLGPTGVGKTELAKALAESLFDDENNMVRIDMSEYMEKHSVSRLIGAPP 651
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PY VVLFDEVEKAH VFN LLQVLDDGR+TD G+TVDF+N
Sbjct: 652 GYVGYDEGGQLTEAVRRKPYCVVLFDEVEKAHPDVFNVLLQVLDDGRITDSTGKTVDFKN 711
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
T++IMTSN+G+++LL G+ ++ A V+ ++R HFRPE LNRLDEI++F PL+ +
Sbjct: 712 TILIMTSNIGSQYLLDGIDDNGLIRPDAESAVMHDLRAHFRPEFLNRLDEIILFKPLTRD 771
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + L ++DV RLA++ +++++T+ A + ++ YDP+YGARP++R+L+K V T
Sbjct: 772 NIGGIISLLIEDVNKRLADKELSISLTERAKEFIVENGYDPVYGARPLKRYLQKNVETLA 831
Query: 821 SRMLVREEIDENSTVYID 838
+R+++ + + T+ ID
Sbjct: 832 ARLILSDGVRAGDTIQID 849
>gi|342180107|emb|CCC89584.1| putative serine peptidase [Trypanosoma congolense IL3000]
Length = 868
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/866 (52%), Positives = 606/866 (69%), Gaps = 28/866 (3%)
Query: 7 THKTNEAIAMAH---ELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENAAQS 61
+ TN I+ H ELA + P+HLA L D + + + +N NAG A
Sbjct: 6 SQSTNAVISALHDAEELAKKHCNGFLDPMHLAFVLFKDENWLPTRVMNKLNAGKVVYA-- 63
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
F +K+LP Q+ AP + + + V+ A+ ++ GDT +A+D L++GL +
Sbjct: 64 ----FEARVKELPRQSSAPARLYPNNEMTTVLSTAEKTRERWGDTLMAIDHLLIGLFQCK 119
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ ++ KEAG + V ++ +LR +G+KV S + T++AL+ Y +L +QA GKLD
Sbjct: 120 EFENIMKEAGAPLKAVGQKIMELR--KGKKVTSQFHEGTYEALERYAVNLCKQAEEGKLD 177
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGR EEI R +R+LSRRTKNNPVLIGEPGVGKTA+ EG+AQRIVRGD+P L+ RL
Sbjct: 178 PVIGRAEEILRTIRVLSRRTKNNPVLIGEPGVGKTAIAEGIAQRIVRGDIPDTLSGARLY 237
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+GAL+AG K RG+FEERLK+VL EV+E+ VILFIDEIHL+LGAG+ G+MDAANL
Sbjct: 238 SLDLGALIAGTKCRGDFEERLKSVLNEVKESPECVILFIDEIHLILGAGKAGGAMDAANL 297
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTLEEYR++VEKDAAFERRF V VAEPSV D +SILRGLKE+YE
Sbjct: 298 LKPMLARGELRTIGATTLEEYRQHVEKDAAFERRFMPVRVAEPSVDDCISILRGLKERYE 357
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
+HGV+I D A+V AAQLS RYIT R +PDKAIDL+DEACA+ RVQL S+PEEI+ LER+
Sbjct: 358 TYHGVQITDNAVVAAAQLSNRYITSRFMPDKAIDLIDEACASTRVQLSSRPEEIETLERR 417
Query: 420 RMQLEIELHALEKE-KDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+ QLEIE ALE++ KD +++ RL V+ ++ + ++LQPL+ +Y +E+ R+DE++ ++
Sbjct: 418 KQQLEIEAKALERDKKDVSAQERLKNVKADIQRVDEELQPLVSKYNEERTRLDELQTMQA 477
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVGPDQI 537
+ +E L+ A R D A AADL+Y I ++ I L+ N + + M+ + I
Sbjct: 478 RLDEKRNKLERASREGDTAMAADLQYNVIPDILDRIRSLKENIERQKAAMVQGEITEADI 537
Query: 538 AEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQ 586
A VVSRWTGIPV RL Q E++RL+ L+ EAV VA+++LR+RAGL RP
Sbjct: 538 ATVVSRWTGIPVARLNQAERDRLLNLSSHLQRRVKGQNEAVGRVADAILRARAGLSRPNS 597
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
PT SFLF+GPTGVGKTEL KA+ +LFDDE +VRIDMSEYME HSV+RL+GAPPGYVGH
Sbjct: 598 PTASFLFVGPTGVGKTELVKAVTVELFDDEKHMVRIDMSEYMEPHSVARLLGAPPGYVGH 657
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTE VRRRP+SVVLFDEVEKAH SV N LLQVLDDGRLTD GRTVDF NT+I+M
Sbjct: 658 EEGGQLTEPVRRRPHSVVLFDEVEKAHPSVHNVLLQVLDDGRLTDTHGRTVDFSNTIIVM 717
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG+E LLS + + RD+V+ V+ FRPELLNRLD++++F+ L +LR V
Sbjct: 718 TSNLGSELLLSSVGETESYDAVRDKVMGAVKGFFRPELLNRLDDVIIFNRLGLAELRDVV 777
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+ + + RLA V++++ D +L E D GARP+RRW+EK + TE+SRML+
Sbjct: 778 NIFLDTINERLASSNVSVSLGKGVCDFILQEGCDMEMGARPLRRWVEKNIFTEISRMLIG 837
Query: 827 EEIDENSTVYIDASPKGDNLVYRVQK 852
+ + NS V + + + L + V++
Sbjct: 838 QRLPPNSCVQLSVNEETGKLAFGVER 863
>gi|300853817|ref|YP_003778801.1| chaperone [Clostridium ljungdahlii DSM 13528]
gi|300433932|gb|ADK13699.1| chaperone [Clostridium ljungdahlii DSM 13528]
Length = 865
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/857 (50%), Positives = 612/857 (71%), Gaps = 22/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
MN DK T K A+ A A H Q +H+ AL+ + G+ + ++
Sbjct: 1 MNIDKLTIKVQNAMNEAQLTAVRYNHQQVDVIHMFSALVFEQDGLIPNIFGKMSVNLKSL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ + V ++ M K+ + + A+ V +A+ + D++++V+ ++LG++
Sbjct: 61 VKETKDVLDK-MPKVLGEGAQSSSVYATRRFEDVFLQAEKIAQKFKDSYISVEHVMLGIM 119
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
E S + + K+ + + ++RG ++VE+ + T++AL YGR+LVE+A
Sbjct: 120 EVHSSDVDGILKKFDITKDAFLEALSQVRG--NQRVETQDPEGTYEALAKYGRNLVEEAK 177
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRRVVRILSRRTKNNPVLIG+PGVGKTA++EGLA+RIVRGD+P L
Sbjct: 178 KHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGDPGVGKTAIIEGLAERIVRGDIPEGLK 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMGAL+AGAK+RGEFEERLKAVLKEV+++EGK++LFIDEIH ++GAG+TEGSM
Sbjct: 238 NKIIFSLDMGALIAGAKFRGEFEERLKAVLKEVQKSEGKIVLFIDEIHTIVGAGKTEGSM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT +EYRKY+EKD A ERRFQ V + EP+V D++SILRGL
Sbjct: 298 DAGNLIKPMLARGELHCIGATTFDEYRKYIEKDKALERRFQPVVIDEPTVEDSISILRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KEK+E +HG+RI D A+V AA+LS RYIT R+LPDKAIDL+DEACA +R ++DS P E+D
Sbjct: 358 KEKFEIYHGIRIHDSAIVAAAKLSDRYITDRYLPDKAIDLIDEACAMIRTEIDSMPTEMD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
N++RK QLEIE AL KEKD AS RL V KEL +L+D+ + +Y+KEK I E+R
Sbjct: 418 NVKRKIFQLEIEKEALSKEKDTASMERLKAVEKELSNLKDRDNEMTAKYEKEKANITEVR 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTETV 532
LK++ +E +++AER YDL + A+L+YG I ++E+ I + E + +++E ML E V
Sbjct: 478 NLKKQLDEARGQIEKAEREYDLNKIAELKYGVIPKLESTIDEKEQSIKENNEAAMLKEEV 537
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
+I+++VS+WTGIPV++L + E+++L IG EAV AV+ +VLR+RAG+
Sbjct: 538 TEQEISQIVSKWTGIPVSKLVEGERQKLVKLEDELAKRVIGQKEAVTAVSNAVLRARAGM 597
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P++P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME++SVSRLIGAPP
Sbjct: 598 KDPKRPIGSFIFLGPTGVGKTELAKTLARTLFDSEENIIRIDMSEYMEKYSVSRLIGAPP 657
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD QG+ VDF+N
Sbjct: 658 GYVGYDEGGQLTEAVRRKPYSVILFDEIEKAHEDVFNIFLQILDDGRLTDNQGKVVDFKN 717
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
++IIMTSN+G+ +LL + RD+V+ +++ F+PE LNRLD+I++F PL+ E+
Sbjct: 718 SIIIMTSNIGSSYLLQNKSSNGIDKDVRDKVMSDMKFKFKPEFLNRLDDIIMFKPLNTEE 777
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
++ + + +KD+ RL E+ +++ +T A +++ E YDP+YGARP++R++E + T ++
Sbjct: 778 IKFIIDIFLKDIENRLKEKNISIQITPKAKEVMAEEGYDPVYGARPLKRYIENILETSIA 837
Query: 822 RMLVREEIDENSTVYID 838
+ ++ +I V +D
Sbjct: 838 KKIINGDIYTGCKVRVD 854
>gi|433446675|ref|ZP_20410567.1| ATP-dependent chaperone ClpB, class III stress response-related
ATPase [Anoxybacillus flavithermus TNO-09.006]
gi|432000182|gb|ELK21082.1| ATP-dependent chaperone ClpB, class III stress response-related
ATPase [Anoxybacillus flavithermus TNO-09.006]
Length = 860
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/866 (52%), Positives = 617/866 (71%), Gaps = 25/866 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN + T K EA+ A LA H + H+ +AL G+ + A
Sbjct: 1 MNMQQMTEKVQEALMRAQSLAVEKQHQEVDVEHVCIALFEQEDGLARRICEKMSVSVATL 60
Query: 61 SAERVFNQAMKKLPSQTPAPD--EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
E +++ + K P + + +I + L + + RA+ K D +++V+ L+L L+
Sbjct: 61 LDE--WHKQLNKKPQVISSSEAGKIYVTNRLQQWLVRAEQEAKQMRDEYVSVEHLLLTLV 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AG 176
+D + + G+ ++ + +RG + +V S + + T++AL+ YGRDLV + AG
Sbjct: 119 DDKEAKQILSRYGIDREKLLQTIMGIRGNQ--RVVSPNPEATYEALQKYGRDLVAEVKAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L D
Sbjct: 177 KIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ ALDM AL+AGAK+RGEFEERLKAVL E++++EG++ILFIDE+H ++GAGR +G++DA
Sbjct: 237 TIFALDMSALIAGAKFRGEFEERLKAVLNEIKKSEGRIILFIDELHTIVGAGRADGALDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQQV V EP+V DT+SILRGLKE
Sbjct: 297 GNMLKPMLARGELHCIGATTLDEYRQYIEKDPALERRFQQVLVEEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
++E HHGV I D ALV AA LS RYI+ R LPDKAIDLVDEACA +R ++DS P E+D +
Sbjct: 357 RFEIHHGVNIHDGALVAAATLSDRYISDRFLPDKAIDLVDEACAMIRTEIDSMPTELDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK MQLEIE AL+KE+D+ASK RL + +EL +LR+K + +++KEKE I +R L
Sbjct: 417 MRKMMQLEIEEAALKKEQDEASKQRLQALSQELANLREKANAMKAQWEKEKEAIQHVRAL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
+++ E+ L+EAE YDL +AA+LR+G I ++E + QLE ++ + L L E V ++
Sbjct: 477 REQLEKAKRELEEAENNYDLNKAAELRHGRIPQLEKQLKQLEQSEKERRL-LREEVTEEE 535
Query: 537 IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGRPQ 585
IA +VS+WTGIPVT+L G+ EK ER+IG EAV V+++VLR+RAG+ P
Sbjct: 536 IATIVSKWTGIPVTKLVEGEREKLLRLSNILHERVIGQDEAVELVSDAVLRARAGMKDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSFLFLGPTGVGKTELAKALAE LFD E ++RIDMSEYME+H+VSRLIGAPPGYVG
Sbjct: 596 RPIGSFLFLGPTGVGKTELAKALAEALFDSEQQMIRIDMSEYMEKHAVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVDF+NTV+I
Sbjct: 656 YEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRMTDSQGRTVDFKNTVVI 715
Query: 706 MTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
MTSN+G+ LL + G+V + AR+QVL+++R HFRPE LNR+D+IV+F PL+ +++
Sbjct: 716 MTSNIGSHTLLEAVDAHGEVNEE-AREQVLKQLRAHFRPEFLNRIDDIVLFKPLTVREVK 774
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +K + RLAER + + +TD A + +D +YGARP++R+++K + T+L+R
Sbjct: 775 GIVEKFIKQLEERLAERHITVTLTDEAKTYIATHGFDHVYGARPLKRFIQKHIETKLARE 834
Query: 824 LVREEIDENSTVYIDASPKGDNLVYR 849
+V I + + V ID +GD LV +
Sbjct: 835 IVAGHIGDYNAVTIDV--EGDQLVVK 858
>gi|365873802|ref|ZP_09413335.1| ATP-dependent chaperone ClpB [Thermanaerovibrio velox DSM 12556]
gi|363983889|gb|EHM10096.1| ATP-dependent chaperone ClpB [Thermanaerovibrio velox DSM 12556]
Length = 873
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/873 (52%), Positives = 615/873 (70%), Gaps = 33/873 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
MN D+FT K+ EA+ A + A H P HL +ALL G+ ++ + G +
Sbjct: 1 MNMDRFTSKSQEALLEAQKEAIRLSHQGIDPEHLLLALLIQEGGLISRILEREGFSVQGM 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q ER + K+ +I + L K++ A+ KA D +++V+ L L LL
Sbjct: 61 IQETERELAR-RPKVSGPAIESGKIYLTHRLSKLLVDAEEEAKAMKDDYVSVEHLFLRLL 119
Query: 119 ED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
E+ + + + K V R + ++RG G+++ SA+ + T++AL+ YGRDLV+ A
Sbjct: 120 EEPDSTPVKRILKTFNVTRDRFLKALAEVRG--GQRITSATPEETYEALEKYGRDLVKMA 177
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRDEEIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRI++GDVP L
Sbjct: 178 KEGKLDPVIGRDEEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRILKGDVPEGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ + ALDMG+L+AGAK+RGEFEERLKAVL E++ + G++ILFIDE+H V+GAG+ EG+
Sbjct: 238 KEKTVFALDMGSLIAGAKFRGEFEERLKAVLSEIKRSNGRIILFIDELHTVVGAGKAEGA 297
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA N+ KPMLARG+LRCIGATTL+EYR+Y+EKD A ERRFQ V V P V DT+SILRG
Sbjct: 298 MDAGNMLKPMLARGELRCIGATTLDEYRQYIEKDPALERRFQPVLVEAPDVEDTISILRG 357
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE++E HHGVRIQD ALV AA LS RYIT R+LPDKAIDLVDEACA++R ++DS P E+
Sbjct: 358 LKERFEVHHGVRIQDNALVSAAVLSNRYITDRYLPDKAIDLVDEACAHIRTEIDSMPAEL 417
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D RK MQLEIE AL KE D AS RL +RKEL + R L +Y+KEK I EI
Sbjct: 418 DAAVRKVMQLEIEEAALSKESDPASMKRLEALRKELSEQRSAADSLRAQYEKEKAAIGEI 477
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEV-------EAAIGQLEGNQSDENL 526
R +++K E++ ++EAER YDL AA L++G + ++ EA + +L G
Sbjct: 478 RSIRKKIEDVKRMIEEAERTYDLNTAAQLKHGELPKLLKELSDKEAELQKLFGGTR---- 533
Query: 527 MLTETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVL 575
+L E V P++IAE+VSRWTGIPV+++ + E+ +R++G EAV V+E+VL
Sbjct: 534 LLKEEVTPEEIAEIVSRWTGIPVSKIQEGEREKLLRLEELLHQRVVGQDEAVRLVSEAVL 593
Query: 576 RSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSR 635
R+RAG+ P++P GSFLFLGPTGVGKTELAKALAE LFD E+ +VRIDMSEYME+HSVSR
Sbjct: 594 RARAGIKDPRRPIGSFLFLGPTGVGKTELAKALAEALFDSEDNMVRIDMSEYMEKHSVSR 653
Query: 636 LIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGR 695
LIGAPPGYVG+EEGGQLTE VRR+PYSV+LFDEVEKAH VFNTLLQ+LDDGR+TD G+
Sbjct: 654 LIGAPPGYVGYEEGGQLTEQVRRKPYSVILFDEVEKAHPDVFNTLLQILDDGRVTDSHGK 713
Query: 696 TVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFD 755
TVDF+N VII+TSN+G++H LS + + A + L EVR FRPE +NRLDEI+VF
Sbjct: 714 TVDFKNCVIILTSNVGSQH-LSRVTSGSDFEEAAKKALDEVRALFRPEFINRLDEIIVFK 772
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PL+ +++R + + + VA RL +R +++ ++ A+D++ E YDPIYGARP++R +++
Sbjct: 773 PLTKDEVRTIVSMLISKVAERLKDRNISVEASEKAMDLIAQEGYDPIYGARPLKRAIQRM 832
Query: 816 VVTELSRMLVREEIDENSTVYIDASPKGDNLVY 848
+ T L++ +++ E+ E ID K + +
Sbjct: 833 IETPLAKAILKGELKEGGWTRIDVQGKDLSFYF 865
>gi|148378412|ref|YP_001252953.1| ClpA-type chaperone [Clostridium botulinum A str. ATCC 3502]
gi|148287896|emb|CAL81962.1| heat shock protein [Clostridium botulinum A str. ATCC 3502]
Length = 866
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/867 (51%), Positives = 617/867 (71%), Gaps = 25/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K T K +AI + +A H Q +HL AL+S G+ + G
Sbjct: 1 MNIEKLTLKVQQAINDSQLVAVKYNHQQIDTIHLFSALISQDDGLIPNILGKMGVNIRDI 60
Query: 61 SAE--RVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+AE RV + M K+ + + + +V RA+ K D++++V+ ++L ++
Sbjct: 61 NAETNRVLDN-MPKVLGEGAQSSSVYPTRRFEEVFVRAEQIAKDFKDSYISVEHVLLAIM 119
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ + + + ++ GV + + +RG ++V++ + T++AL YGR+LVE+A
Sbjct: 120 DVDRNTVLPILEKFGVKKSEFLKALSAVRG--SQRVDNQDPEGTYEALVKYGRNLVEEAK 177
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDV +L
Sbjct: 178 KHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVQESLK 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG++ILFIDEIH ++GAG+TEGSM
Sbjct: 238 NKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGRIILFIDEIHTIVGAGKTEGSM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V EP++ DTVSILRGL
Sbjct: 298 DAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVITDEPTIEDTVSILRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E +HG+RI D A+V AA+LS+RYIT R+LPDKAIDL+DEACA +R +DS P E+D
Sbjct: 358 KERFEIYHGIRIHDSAIVAAAKLSSRYITDRYLPDKAIDLIDEACAMIRTDIDSMPTEMD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+++RK QLEIE AL KEKD ASK RL + KEL +L++K + + +Y+ EK I +IR
Sbjct: 418 SMKRKIFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIR 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTET 531
LK+K +++ +++AER YDL + A+L+YG I ++ I + E S+ N ML E
Sbjct: 478 DLKEKLDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEE 537
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V +I+E++S+WTGIPVTRL + E+++L IG EAV AV +V+R+RAG
Sbjct: 538 VTEQEISEIISKWTGIPVTRLVETERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME++SVSRLIGAP
Sbjct: 598 LKDPRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEENIIRIDMSEYMEKYSVSRLIGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+ +DF+
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKVIDFK 717
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSNLG+ +LL + + R +V + ++ F+PE LNR+D+I++F PL+ E
Sbjct: 718 NTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEALKARFKPEFLNRVDDIIMFKPLTVE 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++++ + + D+ RL ++ + L +TD+A DI+ E YDPIYGARP++R++E + TE+
Sbjct: 778 DIKRIIDIFLDDIRKRLKDKNIQLKITDSAKDIMAKEGYDPIYGARPLKRYIEDTIETEI 837
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLV 847
++ ++ I E +TV +D KG+++V
Sbjct: 838 AKQIIVGNIYEGTTVGVDL--KGESIV 862
>gi|419720483|ref|ZP_14247710.1| ATP-dependent chaperone protein ClpB [Lachnoanaerobaculum saburreum
F0468]
gi|383303303|gb|EIC94761.1| ATP-dependent chaperone protein ClpB [Lachnoanaerobaculum saburreum
F0468]
Length = 863
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/860 (52%), Positives = 614/860 (71%), Gaps = 26/860 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EA+ ++A + G+ Q +HL +LL + I G
Sbjct: 1 MNISKFTQKSIEAVQNMEKVAATHGNQQIGQIHLLASLLDIDGSLIVNLIKKMGINEIEF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E A++KLP + I S L K++ A+ K+ GD +++V+ + L ++E+
Sbjct: 61 RNE--VEAAIEKLPKVSGGQSYI--SNNLNKILITAEDVAKSMGDEYVSVEHIFLNMIEN 116
Query: 121 --SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
S I +F+ G+ + + ++RG + +V S + + T+ L YG DLVE+A
Sbjct: 117 PSSDIAQIFRMYGIDKDKFLKVLSEVRGNQ--RVVSDNPEATYDTLNKYGYDLVERARAQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLA RIV GDVP+NL D
Sbjct: 175 KLDPVIGRDSEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAGRIVAGDVPNNLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL ALDMGAL+AGAKYRGEFEERLKAVL EV+++ G++ILFIDE+H ++GAG+TEGSMDA
Sbjct: 235 RLFALDMGALIAGAKYRGEFEERLKAVLDEVKKSNGEIILFIDELHTIVGAGKTEGSMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EPSV DT+SILRGLKE
Sbjct: 295 GNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVEEPSVEDTISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +L+S P EID L
Sbjct: 355 RYESYHGVKITDGALVSAAVLSDRYISDRFLPDKAIDLVDEACALIKTELNSVPTEIDEL 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK+MQL+IE AL+KE D SK RL ++KEL ++ D+L +++ EK+ ++ + +L
Sbjct: 415 NRKQMQLQIEETALKKEDDNLSKERLEALQKELAEVNDELNTAKSKWENEKKSVEGLAKL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL-MLTETVGPD 535
+ + +E+ + A++ YDL +AA+L+YG + E++ + E E+L +L E+V D
Sbjct: 475 RGEIDEVNRQISAAKQSYDLNKAAELQYGKLPELKKRLQAEEEKVKKEDLSLLRESVTDD 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA ++SRWT IPV++L ++E+ ER+IG EAV+ V ++++RSRAG+ P
Sbjct: 535 EIARIISRWTNIPVSKLNESEREKTLHLADTLHERVIGQDEAVDKVTDAIIRSRAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAK+LA LFDDEN ++RIDMSEYME+ SVSRLIGAPPGYV
Sbjct: 595 SKPIGSFLFLGPTGVGKTELAKSLARALFDDENNMIRIDMSEYMEKFSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD G+TVDF+NT+I
Sbjct: 655 GYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRVTDSLGKTVDFKNTII 714
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+ +LL G+ G ++ ARD+V+ E+R FRPE LNRLDEI++F PL+ + +
Sbjct: 715 IMTSNIGSAYLLDGINTYGDISDN-ARDKVMNELRNSFRPEFLNRLDEIIMFKPLTKDNI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L + ++ +RL ++ + + ++DAA + ++ YDP YGARP++R+L+K V T +++
Sbjct: 774 GGIISLLIDELNLRLKDKELTVELSDAAKNYIIDNGYDPAYGARPLKRYLQKNVETMVAK 833
Query: 823 MLVRE-EIDENSTVYIDASP 841
+++ + E+ +YID P
Sbjct: 834 LILSDGELRAKDIIYIDLDP 853
>gi|148252760|ref|YP_001237345.1| chaperone [Bradyrhizobium sp. BTAi1]
gi|146404933|gb|ABQ33439.1| Chaperone [Bradyrhizobium sp. BTAi1]
Length = 879
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/864 (53%), Positives = 608/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A LA GH QF+PLHL LL D G+ I+ AGG + A
Sbjct: 1 MNIEKYTERARGFIQSAQSLAVRDGHQQFSPLHLLKVLLDDSEGLAGGLIDRAGGNSRA- 59
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ A+ KLP + +I S L + A+ A + GD+ + V++L+LGL
Sbjct: 60 -ILKATEDALGKLPKVSGSGAGQIYLSPELARGFDAAEKAAEKAGDSFVTVERLLLGLTL 118
Query: 120 D--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D S+ G + + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 DKNSETGSILAKGGVTAQNLNAAIESLR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
RL++LD+GAL+AGAKYRGEFEERLKAVL+EV AEG +LFIDE+H ++GAG+ +G+MD
Sbjct: 237 KRLLSLDLGALIAGAKYRGEFEERLKAVLQEVTAAEGTFVLFIDEMHTLIGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EY+K+VEKDAA RRFQ VYV EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPVYVTEPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV +A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ ++L+IE AL+KE D SK RL + KEL DL +K L ++ EK+++ ++
Sbjct: 417 LDREIIRLKIEQEALKKESDLGSKTRLQALEKELADLEEKSASLTAKWSAEKDKLSNAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + +A +L YG I E+E + +E + + M+ E V +
Sbjct: 477 LKSELDALRIELANAQRRGEYQKAGELAYGRIPELEKRLADIEAKE-NAGEMMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EK++L +G EAV+AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKDKLLRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 HRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T +V R+ V+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSEFLVNQPEGEDTSEV-RELVMGTVRSHFRPEFLNRVDEIILFHRLQKSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L ER + L++ A D + A+ +DP YGARP++R +++ V L+ M+
Sbjct: 775 IVEIQFSRLQKLLEERKITLSLDGDARDWLAAKGWDPAYGARPLKRVIQRSVQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ +I + V I S +G+ L +
Sbjct: 835 LAGDIKDGDKVAI--SSEGNVLTF 856
>gi|238924911|ref|YP_002938427.1| heat shock protein ClpB-like protein [Eubacterium rectale ATCC
33656]
gi|238876586|gb|ACR76293.1| heat shock protein ClpB-like protein [Eubacterium rectale ATCC
33656]
Length = 876
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/874 (51%), Positives = 611/874 (69%), Gaps = 28/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EA+ +LA G+ + HL VALLS G+ + I+
Sbjct: 11 MNIQKFTQKSIEAVNDCEKLAYDYGNQEIEQEHLLVALLSQEDGLIPKLIDKM-----EI 65
Query: 61 SAERVFNQAMKKLPSQTP---APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ E A + L ++T + ++ L KV+ A+ KA GD +++V+ L L L
Sbjct: 66 NVEHFTENAKRHLAARTKVSGSSAQVYVGNDLNKVLIHAEDEAKAMGDEYVSVEHLFLCL 125
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L+ + + +L KE G+ R + + +RG + KV S + + T+ L+ YG D+VE+A
Sbjct: 126 LKYPNKAMKELIKEYGLTRDRFLTALSTVRGNQ--KVTSDNPEATYDTLEKYGYDMVERA 183
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD+EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVP L
Sbjct: 184 RQQKLDPVIGRDDEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPEGL 243
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +L ALDMG+L+AGAKYRGEFEERLKAVL+EV+ ++G++ILFIDE+H ++GAG+T+G+
Sbjct: 244 KDKKLFALDMGSLIAGAKYRGEFEERLKAVLEEVKASDGQIILFIDELHTIVGAGKTDGA 303
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA L KPMLARG+L C+GATTL+EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRG
Sbjct: 304 MDAGQLLKPMLARGELHCVGATTLDEYREYIEKDAALERRFQPVMVDEPTVEDTISILRG 363
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LK++YE HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LDS P E+
Sbjct: 364 LKDRYEVFHGVKITDSALVTAAVLSNRYITDRFLPDKAIDLVDEACAMIKTELDSMPAEL 423
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D RK MQLEIE AL+KE D S+ RL ++KEL +LRD +++ EK +D++
Sbjct: 424 DEQNRKIMQLEIEETALKKETDHLSQDRLAALQKELAELRDDFNAKKAQWQNEKGAVDKV 483
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETV 532
+L++K E ++ A++ YDL +AA+L+YG + ++ + E D +L L E V
Sbjct: 484 SKLREKIESTKNEIKTAQQNYDLEKAAELQYGVLPNLQKELESEEALLKDRDLSLVRENV 543
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
G ++IA ++SRWTGIPV +L ++E+ +R+IG + V V E+++RS+AG+
Sbjct: 544 GDEEIALIISRWTGIPVAKLTESERNKTLHLDEELHKRVIGQDDGVTKVTEAIIRSKAGI 603
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTELAKALA LFDDEN +VR+DMSEYME++SVSRLIGAPP
Sbjct: 604 KDPTKPIGSFMFLGPTGVGKTELAKALAASLFDDENNMVRLDMSEYMEKYSVSRLIGAPP 663
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+N
Sbjct: 664 GYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKN 723
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
T+IIMTSNLG++ LL G+ ++ ++V+ E++ HFRPE LNRLDEI++F PL+ +
Sbjct: 724 TIIIMTSNLGSQELLEGIEADGSISTECENRVMDELKGHFRPEFLNRLDEIIMFKPLTKD 783
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + L M D+ RL ++ + + +TD A + YDP+YGARP++R+L+K V T
Sbjct: 784 NIGHIITLLMADLNKRLVDKEITVELTDTAKQFITDNGYDPVYGARPLKRYLQKHVETLA 843
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYRVQKNG 854
+++++ + + T+ ID G VQKN
Sbjct: 844 AKLILADGVRAGDTILIDVK-DGKLSASAVQKNA 876
>gi|331001904|ref|ZP_08325425.1| chaperone ClpB [Lachnospiraceae oral taxon 107 str. F0167]
gi|330412227|gb|EGG91621.1| chaperone ClpB [Lachnospiraceae oral taxon 107 str. F0167]
Length = 863
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/861 (52%), Positives = 615/861 (71%), Gaps = 28/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG-GENAA 59
MN KFT K+ EA+ ++A + G+ Q +HL +LL + I G EN
Sbjct: 1 MNISKFTQKSIEAVQNMEKVAATHGNQQIEQIHLLASLLDIDGSLIVNLIKKMGINENEF 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
++ A++KLP + I S L KV+ A+ K+ GD +++V+ + L +LE
Sbjct: 61 RNE---VESALEKLPKVSGGKTYI--SNDLNKVLITAEDVAKSMGDEYVSVEHIFLNILE 115
Query: 120 D--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ S + +F+ G+ + + ++RG + +V S + + T+ L YG DLVE+A
Sbjct: 116 NPSSNVAQIFRIYGIDKNKFLQVLSEVRGNQ--RVVSDNPEATYDTLNKYGYDLVERARA 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLA RIV GDVP+NL D
Sbjct: 174 QKLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAGRIVAGDVPNNLKD 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L ALDMG L+AGAKYRGEFEERLKAVL EV+++ G+ ILFIDE+H ++GAG+TEGSMD
Sbjct: 234 KKLFALDMGTLIAGAKYRGEFEERLKAVLDEVKKSNGETILFIDELHTIVGAGKTEGSMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EPSV DT+SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVEEPSVEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +L+S P EID
Sbjct: 354 ERYESYHGVKITDGALVSAAVLSDRYISDRFLPDKAIDLVDEACALIKTELNSVPTEIDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L R++MQL+IE AL+KE D SK RL ++KEL ++ D+L +++ EK+ ++ + +
Sbjct: 414 LSRRQMQLQIEETALKKENDNLSKERLEALQKELAEVNDELNEAKSKWENEKKSVEGLAK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL-MLTETVGP 534
L+ + +E+ + A++ YDL +AA+L+YG + E++ + E N E+L +L E+V
Sbjct: 474 LRVEIDEVNRQINAAKQNYDLNKAAELQYGKLPELQKKLQTEEENVKKEDLSLLRESVTD 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA ++SRWT IPV++L ++E+ ER+IG EAV V ++++RSRAG+
Sbjct: 534 EEIARIISRWTNIPVSKLSESEREKTLHLGDTLHERVIGQDEAVEKVTDAIIRSRAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAK+LA+ LFDDEN ++RIDMSEYME+ SVSRLIGAPPGY
Sbjct: 594 PSKPIGSFLFLGPTGVGKTELAKSLAKALFDDENNMIRIDMSEYMEKFSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD G+TVDF+NT+
Sbjct: 654 VGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRVTDSLGKTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
IIMTSN+G+ +LL G+ G ++ + AR++V E+R FRPE LNRLDEI++F PL+ +
Sbjct: 714 IIMTSNIGSGYLLEGINTYGDISEE-AREKVNAELRNSFRPEFLNRLDEIIMFKPLTKDN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L M ++ RL + + + ++DAA D ++ + YDP YGARP++R+L+K V T ++
Sbjct: 773 IGNIINLLMDELNERLESKELKVELSDAAKDFIIEKGYDPAYGARPLKRYLQKNVETMVA 832
Query: 822 RMLVRE-EIDENSTVYIDASP 841
++++ + E+ +YID P
Sbjct: 833 KLILSDNELKSKDIIYIDLDP 853
>gi|443474687|ref|ZP_21064658.1| ATP-dependent chaperone ClpB [Pseudanabaena biceps PCC 7429]
gi|443020577|gb|ELS34522.1| ATP-dependent chaperone ClpB [Pseudanabaena biceps PCC 7429]
Length = 872
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/866 (50%), Positives = 626/866 (72%), Gaps = 25/866 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K AIA ++ ++ Q P HL ALL D G+ A +I G N +
Sbjct: 5 NPNQFTEKAWAAIARTPDVVKASQQQQIEPEHLLKALL-DEEGL-AASIFTKAGLNIQRL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R ++ + + P + + + L ++ RA+ +K+ GD ++++ ++L +D
Sbjct: 63 RDRT-DEFINRQPKVSSSNSSVYLGKNLDVLLDRAEKERKSFGDDFISIEHILLPYCQDE 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G L++E G+ ++++ ++++RG + KV + + ++AL YGRDL E A GKL
Sbjct: 122 RFGKQLYQEMGLDETKLRNVIQQVRGNQ--KVTDQTPENKYEALTKYGRDLTELAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRILSGDVPESLQGRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMG L+AGAKYRGEFEERLKAVLKEV E+ G+ ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGGLIAGAKYRGEFEERLKAVLKEVTESSGQFILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P+V DT+SILRGL+++Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPNVEDTISILRGLRDRY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HH V+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ SQPEE+D + R
Sbjct: 360 ESHHNVKISDTALVAAATLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSQPEELDEINR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D+ S RL ++ KEL L+++ L R++ EK+ ID + ++K+
Sbjct: 420 KVIQLEMECLSLKKENDRESLDRLEKLNKELGGLKEEQTTLKARWEAEKQVIDNLGKIKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ +Q+AER YDL++AA+L+YG + +++E A LE ++ +L + V
Sbjct: 480 DIAHVNVEIQQAERDYDLSKAAELKYGKLTDLQRQLEIAEVNLEEAKNSGRSLLRQEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
+ IAE++S+W+GIPV++L ++EKE R++G EAV A+A+++ RSRAGL
Sbjct: 540 EDIAEIISKWSGIPVSKLVESEKEKLLQLENVLHDRVVGQEEAVTAIADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PNRPIASFIFLGPTGVGKTELAKALAAYLFDTEESMVRIDMSEYMEKHSVSRLVGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF+N +
Sbjct: 660 VGYEEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGRTVDFKNAI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + R++V++ +R FRPE LNR+DEIV+F L ++LR
Sbjct: 720 IIMTSNVGSQYILDIAGDDSRYEEMRERVMESMRASFRPEFLNRIDEIVIFHALRRDELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ++ + RL++R + L + D ALD + YDP+YGARP++R +++++ T++++
Sbjct: 780 RIVKLQVQRLEKRLSDRRMTLKIADVALDFLAEVGYDPVYGARPLKRIIQRQLETKIAKG 839
Query: 824 LVREEIDENSTVYIDASPKGDNLVYR 849
++R E + T+++D + + LV++
Sbjct: 840 ILRGEFTDGDTIFVDI--ENERLVFK 863
>gi|302037581|ref|YP_003797903.1| chaperone protein ClpB [Candidatus Nitrospira defluvii]
gi|300605645|emb|CBK41978.1| Chaperone protein ClpB [Candidatus Nitrospira defluvii]
Length = 864
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/857 (52%), Positives = 611/857 (71%), Gaps = 26/857 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
M+ ++ T K EA+ A LA GH HL +AL+ GI AG AA
Sbjct: 1 MDMNRMTVKLQEALQSASALAMRRGHQGIDVEHLLLALMEQEGGIAGSLFEQAGVSPAAV 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q+AE+ + + ++ AP +I + L ++ A+ + D ++V+ +IL ++
Sbjct: 61 RQAAEQALTK-VAQVHGPGAAPGQIHLTPRLGSLLTNAEDRMRELRDDFVSVEHMILAMV 119
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG-- 176
E+ G +F+ + R+ + ++++RG + +V + + T+QAL+ YGRDL + AG
Sbjct: 120 EE---GGVFRRLNLTRERLLTALQQVRGNQ--RVTTQDPEGTYQALEKYGRDLTKLAGQG 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L
Sbjct: 175 KLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKQK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
R++ LDMGALVAGAK+RGEFEERLKAVLKE++ A+G+V+LFIDE+H V+GAG EG+MDA
Sbjct: 235 RVVVLDMGALVAGAKFRGEFEERLKAVLKEIQSAQGQVLLFIDELHTVVGAGAAEGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
ANL KPMLARG++ IGATTL+EYRK++EKDAA ERRFQ V V +P+V DT+SILRGLKE
Sbjct: 295 ANLLKPMLARGEMHLIGATTLDEYRKHIEKDAALERRFQTVLVDQPTVEDTISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI+D ALV AA+LS RYI R LPDKAIDLVDE+ A +R ++DS P E+D +
Sbjct: 355 RYEVHHGVRIKDAALVAAAKLSNRYIGDRFLPDKAIDLVDESAARLRTEIDSLPAELDEV 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK +QLEIE AL+KE D SKARL + KEL + LQ L R++ EK + ++R++
Sbjct: 415 SRKVLQLEIEREALKKETDAGSKARLQSIEKELTEKNRDLQALKTRWESEKNSVSKLRKI 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE----GNQSDENLMLTETV 532
+Q+ EE+ ++++ER YDL + A+LRYG + +E + +LE G + +E+ +L E V
Sbjct: 475 RQQIEEVKQKIEQSERAYDLNKVAELRYGELPRLEREL-ELEQQHLGKKQNESRLLKEEV 533
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGL 581
+ IA VVSRWTGIPVTRL + E R++G +AV AVA++VLR+R+G+
Sbjct: 534 DEEDIAAVVSRWTGIPVTRLVEGEMEKLLKLDELLHRRVVGQEQAVTAVADAVLRARSGI 593
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTELA+AL+ LFDDE+ L+RIDMSEYME+H+V+RLIGAPP
Sbjct: 594 KDPNRPIGSFLFLGPTGVGKTELARALSVTLFDDESNLIRIDMSEYMEKHTVARLIGAPP 653
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR P+SV+LFDE+EKAH VFN LLQVLDDGRLTD QGRTVDF+N
Sbjct: 654 GYVGYEEGGQLTEAVRRHPFSVILFDEIEKAHHDVFNILLQVLDDGRLTDSQGRTVDFKN 713
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
TV+IMTSN+G++H+L + + + QV E+R HFRPE LNR+DEIVVF L +E
Sbjct: 714 TVLIMTSNIGSQHILEAQQAGASYETMKAQVTGELRAHFRPEFLNRVDEIVVFHALGNEH 773
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L K+ +Q++ + RL ER + L VT AL + YDP+YGARP++R +++++ T ++
Sbjct: 774 LAKIVEIQLERLRARLVERRITLTVTPEALQNLGRRGYDPVYGARPLKRLIQQEIETPMA 833
Query: 822 RMLVREEIDENSTVYID 838
R L++ E+ + T +D
Sbjct: 834 RQLIKGELRDGDTAVVD 850
>gi|374578233|ref|ZP_09651329.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. WSM471]
gi|374426554|gb|EHR06087.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. WSM471]
Length = 879
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/864 (52%), Positives = 613/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T ++ + A LA GH QF+ LH+ LL D G+ A I+ AGG ++
Sbjct: 1 MNIEKYTERSRGFVQSAQSLAVREGHQQFSTLHVLKGLLDDNEGLAAGLIDRAGGN--SR 58
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ + A+ K+P + +I + L + A+ A + GD+ + V++L+LGL
Sbjct: 59 AILKATEDALNKVPKVSGGGAGQIYLAPELARTFDAAEKAGEKAGDSFVTVERLLLGLAL 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ S+ G + + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 EKTSEAGTILAKGGVTPQNLNAAIEALR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LD+G+L+AGAKYRGEFEERLKAVL+EV +EG +LFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLSLDLGSLIAGAKYRGEFEERLKAVLQEVTGSEGNFVLFIDEMHTLIGAGKGDGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EY+K+VEKDAA RRFQ ++V+EPSV DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPIFVSEPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRITDSALVAATTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L+IE AL+KE D SK+RL + KEL DL +K L R+ EK ++ + ++
Sbjct: 417 MDREIIRLKIEQEALKKESDAGSKSRLQTLEKELADLEEKSAALTARWSAEKNKLSDAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + +A +L YG I E+E + ++E + + M+ E V +
Sbjct: 477 LKAELDGLRVELANAQRRGEFQKAGELAYGRIPELEKQLAEIEAKE-NSGEMMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EK++L +G AEAV+AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKDKLLRMEDSLGNRVVGQAEAVHAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+PTGSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPTGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T V R+QV+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSEFLVNQPEGEDTSAV-REQVMGMVRSHFRPEFLNRVDEIILFHRLQRSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L +R + L + A D + A+ +DP YGARP++R +++ V L+ M+
Sbjct: 775 IVEIQFARLQKLLTDRKIVLTLDAAGRDWLAAKGWDPAYGARPLKRVIQRHVQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ ++ + TV I S +G+ L +
Sbjct: 835 LAGDVKDGDTVAI--SSEGNVLTF 856
>gi|291525965|emb|CBK91552.1| ATP-dependent chaperone ClpB [Eubacterium rectale DSM 17629]
Length = 866
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/874 (51%), Positives = 611/874 (69%), Gaps = 28/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EA+ +LA G+ + HL VALLS G+ + I+
Sbjct: 1 MNIQKFTQKSIEAVNDCEKLAYDYGNQEIEQEHLLVALLSQEDGLIPKLIDKM-----EI 55
Query: 61 SAERVFNQAMKKLPSQTP---APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ E A + L ++T + ++ L KV+ A+ KA GD +++V+ L L L
Sbjct: 56 NVEHFTENAKRHLAARTKVSGSSAQVYVGNDLNKVLIHAEDEAKAMGDEYVSVEHLFLCL 115
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L+ + + +L KE G+ R + + +RG + KV S + + T+ L+ YG D+VE+A
Sbjct: 116 LKYPNKAMKELIKEYGLTRDRFLTALSTVRGNQ--KVTSDNPEATYDTLEKYGYDMVERA 173
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD+EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVP L
Sbjct: 174 RQQKLDPVIGRDDEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPEGL 233
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +L ALDMG+L+AGAKYRGEFEERLKAVL+EV+ ++G++ILFIDE+H ++GAG+T+G+
Sbjct: 234 KDKKLFALDMGSLIAGAKYRGEFEERLKAVLEEVKASDGQIILFIDELHTIVGAGKTDGA 293
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA L KPMLARG+L C+GATTL+EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRG
Sbjct: 294 MDAGQLLKPMLARGELHCVGATTLDEYREYIEKDAALERRFQPVMVDEPTVEDTISILRG 353
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LK++YE HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LDS P E+
Sbjct: 354 LKDRYEVFHGVKITDSALVTAAVLSNRYITDRFLPDKAIDLVDEACAMIKTELDSMPAEL 413
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D RK MQLEIE AL+KE D S+ RL ++KEL +LRD +++ EK +D++
Sbjct: 414 DEQNRKIMQLEIEETALKKETDHLSQDRLAALQKELAELRDDFNAKKAQWQNEKGAVDKV 473
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETV 532
+L++K E ++ A++ YDL +AA+L+YG + ++ + E D +L L E V
Sbjct: 474 SKLREKIESTKNEIKTAQQNYDLEKAAELQYGVLPNLQKELESEEALLKDRDLSLVRENV 533
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
G ++IA ++SRWTGIPV +L ++E+ +R+IG + V V E+++RS+AG+
Sbjct: 534 GDEEIALIISRWTGIPVAKLTESERNKTLHLDEELHKRVIGQDDGVTKVTEAIIRSKAGI 593
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTELAKALA LFDDEN +VR+DMSEYME++SVSRLIGAPP
Sbjct: 594 KDPTKPIGSFMFLGPTGVGKTELAKALAASLFDDENNMVRLDMSEYMEKYSVSRLIGAPP 653
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+N
Sbjct: 654 GYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKN 713
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
T+IIMTSNLG++ LL G+ ++ ++V+ E++ HFRPE LNRLDEI++F PL+ +
Sbjct: 714 TIIIMTSNLGSQELLEGIEADGSISTECENRVMDELKGHFRPEFLNRLDEIIMFKPLTKD 773
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + L M D+ RL ++ + + +TD A + YDP+YGARP++R+L+K V T
Sbjct: 774 NIGHIITLLMADLNKRLVDKEITVELTDTAKQFITDNGYDPVYGARPLKRYLQKHVETLA 833
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYRVQKNG 854
+++++ + + T+ ID G VQKN
Sbjct: 834 AKLILADGVRAGDTILIDVK-DGQLSASAVQKNA 866
>gi|291527301|emb|CBK92887.1| ATP-dependent chaperone ClpB [Eubacterium rectale M104/1]
Length = 866
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/874 (51%), Positives = 611/874 (69%), Gaps = 28/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EA+ +LA G+ + HL VALLS G+ + I+
Sbjct: 1 MNIQKFTQKSIEAVNDCEKLAYDYGNQEIEQEHLLVALLSQEDGLIPKLIDKM-----EI 55
Query: 61 SAERVFNQAMKKLPSQTP---APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ E A + L ++T + ++ L KV+ A+ KA GD +++V+ L L L
Sbjct: 56 NVEHFTENAKRHLAARTKVSGSSAQVYVGNDLNKVLIHAEDEAKAMGDEYVSVEHLFLCL 115
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L+ + + +L KE G+ R + + +RG + KV S + + T+ L+ YG D+VE+A
Sbjct: 116 LKYPNKAMKELIKEYGLTRDRFLTALSTVRGNQ--KVTSDNPEATYDTLEKYGYDMVERA 173
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD+EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVP L
Sbjct: 174 RQQKLDPVIGRDDEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPEGL 233
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +L ALDMG+L+AGAKYRGEFEERLKAVL+EV+ ++G++ILFIDE+H ++GAG+T+G+
Sbjct: 234 KDKKLFALDMGSLIAGAKYRGEFEERLKAVLEEVKASDGQIILFIDELHTIVGAGKTDGA 293
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA L KPMLARG+L C+GATTL+EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRG
Sbjct: 294 MDAGQLLKPMLARGELHCVGATTLDEYREYIEKDAALERRFQPVMVDEPTVEDTISILRG 353
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LK++YE HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LDS P E+
Sbjct: 354 LKDRYEVFHGVKITDSALVTAAVLSNRYITDRFLPDKAIDLVDEACAMIKTELDSMPAEL 413
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D RK MQLEIE AL+KE D S+ RL ++KEL +LRD +++ EK +D++
Sbjct: 414 DEQNRKIMQLEIEETALKKETDHLSQDRLAALQKELAELRDDFNAKKAQWQNEKGAVDKV 473
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETV 532
+L++K E ++ A++ YDL +AA+L+YG + ++ + E D +L L E V
Sbjct: 474 SKLREKIESTKNEIKTAQQNYDLEKAAELQYGVLPNLQKELESEEALLKDRDLSLVRENV 533
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
G ++IA ++SRWTGIPV +L ++E+ +R+IG + V V E+++RS+AG+
Sbjct: 534 GDEEIALIISRWTGIPVAKLTESERNKTLHLDEELHKRVIGQDDGVTKVTEAIIRSKAGI 593
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTELAKALA LFDDEN +VR+DMSEYME++SVSRLIGAPP
Sbjct: 594 KDPTKPIGSFMFLGPTGVGKTELAKALAASLFDDENNMVRLDMSEYMEKYSVSRLIGAPP 653
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+N
Sbjct: 654 GYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKN 713
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
T+IIMTSNLG++ LL G+ ++ ++V+ E++ HFRPE LNRLDEI++F PL+ +
Sbjct: 714 TIIIMTSNLGSQELLEGIEADGSISTECENRVMDELKGHFRPEFLNRLDEIIMFKPLTKD 773
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + L M D+ RL ++ + + +TD A + YDP+YGARP++R+L+K V T
Sbjct: 774 NIGHIITLLMADLNKRLVDKEITVELTDTAKQFITDNGYDPVYGARPLKRYLQKHVETLA 833
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYRVQKNG 854
+++++ + + T+ ID G VQKN
Sbjct: 834 AKLILADGVRAGDTILIDVK-DGKLSASAVQKNA 866
>gi|443322190|ref|ZP_21051221.1| ATP-dependent chaperone ClpB [Gloeocapsa sp. PCC 73106]
gi|442788076|gb|ELR97778.1| ATP-dependent chaperone ClpB [Gloeocapsa sp. PCC 73106]
Length = 870
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/855 (51%), Positives = 613/855 (71%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP KFT K EAI ++A H Q HL +LL A +I N + +
Sbjct: 5 NPQKFTEKAWEAIVRTPDIAKQHKHQQLESEHLMKSLLEQEG--LASSILNKANISVPKL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R Q +++ P + I ++L ++ R+ ++ D +++++ L+L +D+
Sbjct: 63 RDRT-EQFIQRQPQLAKPSESIYLGSSLDTLLDRSDNFRQEFQDEYISIEHLLLAYCQDT 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAGKL 178
+ G LF+E + ++K + ++RG + KV + + +Q+L+ YGR+L + +AGKL
Sbjct: 122 RFGKALFQEFALNENKLKDIISQVRGTQ--KVTDQNPEGKYQSLEKYGRELTQLARAGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV DVP +L D +L
Sbjct: 180 DPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNRDVPESLRDRQL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFEERLKAVLKEV E++G +ILFIDEIH V+GAG T+GSMDA N
Sbjct: 240 IALDMGALIAGAKYRGEFEERLKAVLKEVTESQGNIILFIDEIHTVVGAGATQGSMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ VYV EPSV DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQSVYVGEPSVIDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADNALVAAAMLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE + S RL ++ KEL +L+++ L +++ EKE ID+IR LK
Sbjct: 420 KVLQLEMERLSLQKEVNPISLERLSKLEKELANLKEQQTALNAQWQSEKEIIDQIRSLKA 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG----NQSDENLMLTETVGP 534
+++ +Q+AER YDL RAA+LRYG + +++ I +E Q+ +L E V
Sbjct: 480 TIDQVNLEIQQAERDYDLNRAAELRYGKLTDLQRQIQAIETKLAEQQTTGKTLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IAE++++WTGIP+T+L +EK +R+IG +EAV AVA+++ RSRAGL
Sbjct: 540 ADIAEIIAKWTGIPITKLVASEKDKLLHLDAELHQRVIGQSEAVEAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E+ +VRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFIFLGPTGVGKTELAKALAVSLFDSESAMVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTE +RRRPY+VVLFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYEEGGQLTEVIRRRPYAVVLFDEIEKAHPDVFNVMLQILDDGRLTDSQGHVVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + +V++ +R++FRPE LNR+DE+++F L QL
Sbjct: 720 IIMTSNIGSQYILDVAGDDSQYEQMKSRVIEVMRQNFRPEFLNRIDEMIIFHSLKPSQLN 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +Q++ + RLAE+ + L +++AA + + YDP+YGARP++R +++ + T +++
Sbjct: 780 EIVEIQVRQLEKRLAEQKLTLKLSEAARSFLASVGYDPVYGARPLKRAIQRYLETPIAKA 839
Query: 824 LVREEIDENSTVYID 838
++R E + T+++D
Sbjct: 840 ILRGEFKPDDTIWVD 854
>gi|428781300|ref|YP_007173086.1| ATP-dependent chaperone ClpB [Dactylococcopsis salina PCC 8305]
gi|428695579|gb|AFZ51729.1| ATP-dependent chaperone ClpB [Dactylococcopsis salina PCC 8305]
Length = 875
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/858 (52%), Positives = 615/858 (71%), Gaps = 29/858 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSD---PSGIFAQAINNAGGENA 58
NP++FT K EAI E+A Q HL +LL S +F++A + +
Sbjct: 5 NPNQFTEKAWEAIVRLPEIAKQNQQQQIESEHLLKSLLEQDGLASSVFSKA------DVS 58
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q ++ + + P + I +L ++ RA+ +++ D +++++ LIL
Sbjct: 59 VQRLRDRADEFIAQQPKISNTGGSIYLGRSLDTLLDRAEKFRQSLEDEYISIEHLILAFA 118
Query: 119 EDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D + G L+KE G+ R+K+ ++ +RG + KV + + ++AL+ YGRDL A
Sbjct: 119 DDDRFGKALYKEFGLNEKRLKTVIKDIRGSQ--KVTDQNPENKYEALEKYGRDLTAWARE 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRR V+ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV DVP +L D
Sbjct: 177 GKLDPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSRDVPESLRD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L ALD+G+LVAGAKYRGEFEERLKAVLKEV EA G++I+FIDEIH V+GAG T+G+MD
Sbjct: 237 RKLFALDLGSLVAGAKYRGEFEERLKAVLKEVTEAAGQIIMFIDEIHTVVGAGATQGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+LRCIGATTL+EYR+++EKDAA ERRFQ VYV EP+V DT+SILRGLK
Sbjct: 297 AGNLLKPMLARGELRCIGATTLDEYRQHIEKDAALERRFQAVYVDEPNVTDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGV+I DR LV AA LS RYI+ R+LPDKAIDLVDE+ A +++++ S+PEE+D
Sbjct: 357 ERYEVHHGVKIADRCLVAAAMLSDRYISDRYLPDKAIDLVDESAAKLKMEITSKPEELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +L+KE+D SK RL + KEL +L+++ L +++ EKE ID+IR
Sbjct: 417 IDRKILQLEMERLSLQKEEDTTSKERLETLEKELANLKEEQDELNAQWQAEKEVIDQIRS 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLTET 531
+K+ +++ +Q+AER YDL RAA+LRYG + E+ + A +LE QS + +L E
Sbjct: 477 IKETIDQVNLEIQQAERDYDLNRAAELRYGRLTELQRQRQEAENKLEEMQSSGHTLLREE 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V +AE++S+WTGIP+++L +EKE+L +G EAV AVAE++ RSRAG
Sbjct: 537 VAEADVAEIISKWTGIPISKLMASEKEKLLHLEDELHDRVVGQEEAVRAVAEAIQRSRAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +PT SF+FLGPTGVGKTELAKALA LFD EN LVR+DMSEYME+H+VSRL+GAP
Sbjct: 597 LADPNRPTASFIFLGPTGVGKTELAKALASNLFDTENALVRVDMSEYMEKHAVSRLVGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTE +RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QGR VDF+
Sbjct: 657 PGYVGYEEGGQLTEPIRRRPYSVILFDEIEKAHPDVFNIMLQILDDGRLTDSQGRVVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSN+G++ +L ++V+ +R++FRPE LNR+DEI++F L
Sbjct: 717 NTIIIMTSNIGSDLILDVSGDDSRYDEMYNRVMGAMRENFRPEFLNRIDEIIIFHALQKA 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
QLR++ RLQ + + RL+E+ ++L ++ ALD + YDP+YGARP++R +++ V T +
Sbjct: 777 QLREIVRLQTQYLEDRLSEQKLSLKLSQEALDYLAEIGYDPVYGARPLKRAVQRYVETPI 836
Query: 821 SRMLVREEIDENSTVYID 838
++ L+R E E ++ D
Sbjct: 837 AKSLLRGEFSEGDSLLGD 854
>gi|393766590|ref|ZP_10355145.1| ATP-dependent chaperone ClpB [Methylobacterium sp. GXF4]
gi|392727908|gb|EIZ85218.1| ATP-dependent chaperone ClpB [Methylobacterium sp. GXF4]
Length = 874
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/859 (53%), Positives = 605/859 (70%), Gaps = 21/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN D +T + + A LA GH Q P HL LL DP G+ A I+ AGG++
Sbjct: 1 MNFDIYTERARGFVQAAQNLAMREGHPQLQPGHLLKVLLDDPEGLCAGLIDRAGGQSRVA 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A+ +Q + K P + A+ L+++ A+ A K GD+++ V++L+L L
Sbjct: 61 LAQT--DQWLAKQPKVSGNASAPQATRELMRLFDTAEQAAKKAGDSYVTVERLLLALAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+DS+ G + AGV A + + + LR +GR ++AS + + ALK Y RDL E A G
Sbjct: 119 KDSEAGRALQAAGVTPASLNAAINALR--KGRTADNASAENAYDALKKYARDLTEAARDG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLRDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
L+ALDMG+L+AGAKYRGEFEERLK VL EV AEG +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 SLLALDMGSLIAGAKYRGEFEERLKGVLSEVTAAEGGIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRIQD ALV AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+D++
Sbjct: 357 KYEQHHGVRIQDSALVAAATLSNRYITDRFLPDKAIDLIDEAGSRLRMQVDSKPEELDSI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ ++L+IE AL+KE D AS+ RLV + KEL DL ++ + R+K EK+++ L
Sbjct: 417 DREIVRLKIEAEALKKETDSASRDRLVRLEKELADLEERSASITARWKAEKDKLGTAAGL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVGPD 535
K+K +E L A+R+ RA +L YG I +E + ++E + + M+ E V P
Sbjct: 477 KKKLDEARNELAAAQRQGQYQRAGELAYGVIPGLEKQLAEIEAKAEGGRDGMMEEAVTPA 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRP 584
+A VVSRWTG+PV ++ + E+E R++G EAV AV+ +V R+RAGL P
Sbjct: 537 HVAGVVSRWTGVPVDKMLEGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALA LFDD+ LVRIDMSEYME+H+V+RLIGAPPGYV
Sbjct: 597 NRPIGSFMFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVARLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT++
Sbjct: 657 GYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLL 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLGAE+L++ G+ T + R++V+ VR HFRPE LNR+DEI++F L+ ++
Sbjct: 717 IMTSNLGAEYLVNQPAGEDT-EAVREEVMNVVRSHFRPEFLNRVDEIILFHRLARSEMGA 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+ +A L +R + L + + A + + YDP YGARP++R ++K V L+ ++
Sbjct: 776 IVEIQLGRLAKLLEDRKITLDLDEEAKIWLADKGYDPAYGARPLKRVIQKNVQDPLAELV 835
Query: 825 VREEIDENSTVYIDASPKG 843
+ +I + TV + P G
Sbjct: 836 LSGKIHDGETVPVRLGPMG 854
>gi|239907703|ref|YP_002954444.1| chaperone ClpB [Desulfovibrio magneticus RS-1]
gi|239797569|dbj|BAH76558.1| chaperone ClpB [Desulfovibrio magneticus RS-1]
Length = 866
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/866 (52%), Positives = 618/866 (71%), Gaps = 37/866 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ +AI A +A G Q HL ALL+ G+ + ++ AG + A
Sbjct: 1 MDLNKFTQKSQQAIGEAQAVAVRMGQQQVDAEHLLYALLTQDQGLVPRILDKAGYNSQAY 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
AE + + +LP + P ++ + L +++ + Q + D +++V+ L L
Sbjct: 61 LAE--LERGLSRLPKVSGPGAQPGQVYVTPRLNEILVKGQDLARHLKDEYVSVEHLFLAF 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
++ + G + K G+ R+ + + ++RG G++V SA + T++AL YGRDLV+
Sbjct: 119 CDEGPSTLAGQVNKALGIDKNRILAALTEIRG--GQRVTSADPEATYEALTKYGRDLVDA 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GK+DPVIGRDEEIRRV+RILSRRTKNNPV+IGE GVGKTA+VEGLA RIV DVP
Sbjct: 177 ARKGKIDPVIGRDEEIRRVIRILSRRTKNNPVVIGEAGVGKTAIVEGLAMRIVNKDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L + + ALDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG+VILFIDE+H ++GAG+TEG
Sbjct: 237 LKEKTIFALDMGALIAGAKYRGEFEERLKAVLKEVQSSEGRVILFIDELHTIVGAGKTEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA NL KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V+V EP+V DT+SILR
Sbjct: 297 SMDAGNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVFVDEPTVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGVRI D +LV AA LS RY+ R LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLRERFEVHHGVRINDSSLVEAAVLSQRYLPDRQLPDKAIDLIDEAAAMIRTEIDSLPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK MQLEIE AL +E DKAS+ RL ++ +EL +L++ M +++KEK ++
Sbjct: 417 LDQINRKVMQLEIEREALRRETDKASRERLEKLEEELANLKESQASFMTQWEKEKGAVEV 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEV-------EAAIGQLEGNQSDEN 525
+RR+K+ E+ A++EAER YDL +AA+LRYG + + EAAI + G
Sbjct: 477 LRRVKEDIEKTKLAIEEAERAYDLNKAAELRYGRLAGLERDLAGQEAAIAKAAGGTR--- 533
Query: 526 LMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESV 574
++ E V PD IA V+SRWTGIPVTRL ++E+E R++G EAV AVA++V
Sbjct: 534 -LIREEVAPDDIAMVISRWTGIPVTRLLESEREKLLRLGEVLHDRVVGQDEAVTAVADAV 592
Query: 575 LRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVS 634
LR+RAGL P +P GSF+FLGPTGVGKTEL K LA LFD E+ +VR+DMSEYME+H+V+
Sbjct: 593 LRARAGLKDPGRPIGSFIFLGPTGVGKTELCKTLAAALFDTEDNIVRLDMSEYMERHTVA 652
Query: 635 RLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQG 694
RLIGAPPGY+G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQ+LDDGRLTD G
Sbjct: 653 RLIGAPPGYIGYDEGGQLTEAVRRKPYSVVLFDEIEKAHSDVFNALLQILDDGRLTDSHG 712
Query: 695 RTVDFRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIV 752
RTVDF+NT+IIMTSNLGA+++L G++ G+ V+ + V+ +R HFRPE LNR+DE+V
Sbjct: 713 RTVDFKNTIIIMTSNLGAQYMLDGILPSGEFKEGVS-ESVMNTLRGHFRPEFLNRVDEVV 771
Query: 753 VFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWL 812
+F PL EQ+ + L + + RLA+R ++LA++DAA + +YDP++GARP+RR+L
Sbjct: 772 LFKPLLREQIAAIVELMLGGLRARLADRKISLALSDAAKAFIAETAYDPVFGARPLRRYL 831
Query: 813 EKKVVTELSRMLVREEIDENSTVYID 838
+ + T L++ L+ ++ + TV +D
Sbjct: 832 QAHIETPLAKALIGGQVSDGQTVTVD 857
>gi|323485146|ref|ZP_08090497.1| hypothetical protein HMPREF9474_02248 [Clostridium symbiosum
WAL-14163]
gi|323401465|gb|EGA93812.1| hypothetical protein HMPREF9474_02248 [Clostridium symbiosum
WAL-14163]
Length = 860
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/858 (52%), Positives = 616/858 (71%), Gaps = 29/858 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ +LA G+ Q HL ++LL+ + + I G
Sbjct: 1 MNINKFTQKSLEAVQNTEKLAYEYGNQQIDQEHLLLSLLTIDDSLILKLITKMG-----I 55
Query: 61 SAERVFN---QAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S E+ N Q + KLP + ++ S KV+ A+ KA GD +++V+ L L +
Sbjct: 56 SGEQFVNEIVQNIGKLPKVSGG--QVYFSNDANKVLVNAEDEAKAMGDEYVSVEHLFLSM 113
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L+ + + +LF+ G+ + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 114 LKQPNRAVKELFRLYGITKENFLQALSTVRGNQ--RVVSDNPEATYDTLNKYGYDLVERA 171
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD EIR VV ILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L
Sbjct: 172 RDQKLDPVIGRDSEIRNVVMILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGL 231
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +L ALDMGAL+AGAKYRGEFEERLKAVL EV++++G++ILFIDE+H ++GAG+TEGS
Sbjct: 232 KDKKLFALDMGALMAGAKYRGEFEERLKAVLDEVKKSDGQIILFIDELHTIVGAGKTEGS 291
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA N+ KPMLARG+L CIGATTL+EYRKY+EKDAA ERRFQ V V EP+V DT+SILRG
Sbjct: 292 MDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDAALERRFQPVRVDEPTVEDTISILRG 351
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ ++DS P E+
Sbjct: 352 LKERYEVYHGVKITDSALVSAAVLSDRYISDRFLPDKAIDLVDEACAMIKTEMDSMPAEM 411
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L R+ MQLEIE AL+KE D+ SK RL +++KEL +LRD +++ EK +D++
Sbjct: 412 DELSRRIMQLEIEEAALKKETDRLSKDRLEDLQKELAELRDSFSSQKAQWENEKSSVDKL 471
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETV 532
+L+++ E + +Q A++ YDL RAA+L+YG + E++ + + E +++ L E+V
Sbjct: 472 SKLREEIEHINGEIQAAQQAYDLNRAAELQYGKLPELKKQLEEEEARVKSQDMSLVHESV 531
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
++IA ++S+WTGIPV +L ++E+ +R+IG EAV V E+V+RS+AG+
Sbjct: 532 TDEEIARIISKWTGIPVAKLTESERSKTLHMDEILHKRVIGQDEAVTKVTEAVIRSKAGI 591
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTELAKALAE LFDDEN +VRIDMSEYME+HSVSRLIGAPP
Sbjct: 592 KDPTKPIGSFLFLGPTGVGKTELAKALAESLFDDENNMVRIDMSEYMEKHSVSRLIGAPP 651
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PY VVLFDEVEKAH VFN LLQVLDDGR+TD G+TVDF+N
Sbjct: 652 GYVGYDEGGQLTEAVRRKPYCVVLFDEVEKAHPDVFNVLLQVLDDGRITDSTGKTVDFKN 711
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
T++IMTSN+G+++LL G+ ++ A V+ ++R HFRPE LNRLDEI++F PL+ +
Sbjct: 712 TILIMTSNIGSQYLLDGIDDNGLIRPDAESAVMHDLRAHFRPEFLNRLDEIILFKPLTRD 771
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + L ++DV RLA++ +++++T+ A + ++ YDP+YGARP++R+L+K V T
Sbjct: 772 NIGGIISLLIEDVNKRLADKELSISLTERAKEFIVENGYDPVYGARPLKRYLQKNVETLA 831
Query: 821 SRMLVREEIDENSTVYID 838
+R+++ + + T+ ID
Sbjct: 832 ARLILSDGVRAGDTIQID 849
>gi|373469750|ref|ZP_09560913.1| ATP-dependent chaperone protein ClpB [Lachnospiraceae bacterium
oral taxon 082 str. F0431]
gi|371763734|gb|EHO52191.1| ATP-dependent chaperone protein ClpB [Lachnospiraceae bacterium
oral taxon 082 str. F0431]
Length = 863
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/860 (52%), Positives = 613/860 (71%), Gaps = 26/860 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EA+ ++A + G+ Q +HL +LL + I G
Sbjct: 1 MNISKFTQKSIEAVQNMEKVAATHGNQQIEQIHLLASLLDIEGSLIVNLIKKMGINEIEF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E A++KLP + I S L K++ A+ K+ GD +++V+ + L +LE+
Sbjct: 61 RNE--VEAAIEKLPKVSGGQSYI--SNDLNKILITAEDVAKSMGDEYVSVEHIFLNILEN 116
Query: 121 --SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
S + +F+ G+ + + ++RG + +V S + + T+ L YG DLVE+A
Sbjct: 117 PSSNVAQIFRMYGIDKDKFLKVLSEVRGNQ--RVVSDNPEATYDTLNKYGYDLVERARQQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLA RIV GDVP+NL D
Sbjct: 175 KLDPVIGRDSEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAGRIVAGDVPNNLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL ALDMGAL+AGAKYRGEFEERLKAVL EV+++ G++ILFIDE+H ++GAG+TEGSMDA
Sbjct: 235 RLFALDMGALIAGAKYRGEFEERLKAVLDEVKKSNGEIILFIDELHTIVGAGKTEGSMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EPSV DT+SILRGLKE
Sbjct: 295 GNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVEEPSVEDTISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +L+S P EID L
Sbjct: 355 RYESYHGVKITDGALVSAAVLSDRYISDRFLPDKAIDLVDEACALIKTELNSVPTEIDEL 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK+MQL+IE AL+KE D SK RL ++KEL ++ D+L +++ EK+ ++ + +L
Sbjct: 415 NRKQMQLQIEETALKKEDDNLSKERLEALQKELAEVNDELNEAKSKWENEKKSVEGLAKL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL-MLTETVGPD 535
+ + +E+ + A++ YDL +AA+L+YG + E++ + E E+L +L E V D
Sbjct: 475 RGEIDEVNRQISAAKQSYDLNKAAELQYGKLPELKKQLQAEEEKVKKEDLSLLREAVTDD 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA ++SRWT IPV++L ++E+ ER+IG EAV+ V ++++RSRAG+ P
Sbjct: 535 EIARIISRWTNIPVSKLNESEREKTLHLADTLHERVIGQDEAVDKVTDAIIRSRAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAK+LA+ LFDDEN ++RIDMSEYME+ SVSRLIGAPPGYV
Sbjct: 595 SKPIGSFLFLGPTGVGKTELAKSLAKALFDDENNMIRIDMSEYMEKFSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD G+TVDF+NT+I
Sbjct: 655 GYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRVTDSLGKTVDFKNTII 714
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+ +LL G+ G ++ + AR +V+ E+R FRPE LNRLDEI++F PL+ + +
Sbjct: 715 IMTSNIGSAYLLDGINTYGDIS-EDARSKVMNELRNSFRPEFLNRLDEIIMFKPLTKDNI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L + ++ +RL ++ + + ++DAA ++ YDP YGARP++R+L+K V T ++R
Sbjct: 774 GGIINLLIDELNLRLKDKELTVELSDAAKSYIIDNGYDPAYGARPLKRYLQKNVETMVAR 833
Query: 823 MLVRE-EIDENSTVYIDASP 841
+++ + ++ +YID P
Sbjct: 834 LILSDGDLSAKDIIYIDLDP 853
>gi|39937493|ref|NP_949769.1| endopeptidase Clp ATP-binding subunit B [Rhodopseudomonas palustris
CGA009]
gi|192293280|ref|YP_001993885.1| ATP-dependent chaperone ClpB [Rhodopseudomonas palustris TIE-1]
gi|54035765|sp|Q6N1H2.1|CLPB_RHOPA RecName: Full=Chaperone protein ClpB
gi|39651352|emb|CAE29874.1| endopeptidase Clp: ATP-binding subunit B, clpB [Rhodopseudomonas
palustris CGA009]
gi|192287029|gb|ACF03410.1| ATP-dependent chaperone ClpB [Rhodopseudomonas palustris TIE-1]
Length = 879
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/855 (53%), Positives = 606/855 (70%), Gaps = 22/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A LA GH QF+PLH+ LL D G+ I+ AGG ++
Sbjct: 1 MNVEKYTERVRGFIQSAQSLAMREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGN--SR 58
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ + +A+ K+P + ++ + + A+ A + GD+ + V++L+L L
Sbjct: 59 AILKATEEALGKMPKVSGSGAGQVYLAPATARAFDAAEKAAEKAGDSFVTVERLLLALSL 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+DS+ G L + GV + + + LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 DKDSEAGQLLTKGGVTPQNLNAAINALR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV AEG +ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLALDMGALIAGAKYRGEFEERLKAVLNEVTAAEGGIILFIDEMHTLVGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRIADSALVAAVTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L+IE AL+KE D SKARLV + KEL DL +K L R+ EK ++ + ++
Sbjct: 417 MDREIVRLKIEQEALKKETDPGSKARLVTLEKELADLEEKSAALTQRWSAEKNKLSDAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + RA +L YG I E+E I ++E N+ + M+ E V +
Sbjct: 477 LKSELDALRIELANAQRRGEYQRAGELAYGRIPELEKKIAEIEANE-NSGAMVEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EKE+L +G EAV+AV+ +V R+RAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKEKLLRMEEQLGQRVVGQFEAVHAVSTAVRRARAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LFDDE +VRIDMSE+ME+HSV+RLIGAPPGYV
Sbjct: 596 NRPMGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDMSEFMEKHSVARLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
+MTSNLG+E+L++ G+ T V R+QV+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 VMTSNLGSEYLVNQPEGEDTGAV-REQVMGMVRAHFRPEFLNRVDEIILFHRLQKSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L +R + L + AA D + + +DP YGARP++R +++ V L+ M+
Sbjct: 775 IVDIQFARLTKLLEDRKIVLDLDAAARDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMI 834
Query: 825 VREEIDENSTVYIDA 839
+ + + V I A
Sbjct: 835 LEGSVKDGDHVAISA 849
>gi|158335282|ref|YP_001516454.1| chaperone ClpB [Acaryochloris marina MBIC11017]
gi|158305523|gb|ABW27140.1| chaperone ClpB [Acaryochloris marina MBIC11017]
Length = 875
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/869 (50%), Positives = 625/869 (71%), Gaps = 31/869 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA-- 59
N D+FT K AI +LA A Q HL AL+ D G+ Q AG +
Sbjct: 5 NHDQFTEKAWAAIVRTSDLAKEAQQQQIESEHLLQALVED-DGLAGQIFTKAGTDVQRVR 63
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
++ E + QA PS++ + +L + RA+ +++ GD ++++ L+LG +
Sbjct: 64 DRTTEFINRQAKLTTPSES-----VYLGRSLDTLFDRAENFRRSLGDDFISIEHLVLGYI 118
Query: 119 EDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
ED + G L + G+ +K V +RG KV + + +++L+ YGRDL A
Sbjct: 119 EDDRFGQPLLQGLGITEQMLKQAVTDIRG--NHKVTDKNPEGKYESLEKYGRDLTALARE 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV DVP +L D
Sbjct: 177 GKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVARDVPESLRD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LIALDMG+L+AGAKYRGEFEERLK+VLKEV E++G +ILFIDEIH V+GAG ++G+MD
Sbjct: 237 RKLIALDMGSLIAGAKYRGEFEERLKSVLKEVTESDGLMILFIDEIHTVVGAGASQGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVY+ +P++ DTVSILRGLK
Sbjct: 297 AGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYIDQPNIQDTVSILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGV+I D ALV AA LS RYI+ R LPDKAIDL+DEA A +++++ S+PEE+D
Sbjct: 357 ERYEVHHGVKISDNALVAAATLSTRYISDRFLPDKAIDLMDEAAAKLKMEITSKPEELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +LEKE D+AS RL + +E+ +L++ + L +++ EK+ ID+I+
Sbjct: 417 IDRKILQLEMERLSLEKESDRASLERLERIEQEIANLQEDQKTLNAQWQSEKQIIDDIQT 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTET 531
+K++ + + +Q+AER YDL AA+L+YG + +++E+A QL Q++ N +L E
Sbjct: 477 IKEEIDRVNIEIQQAERNYDLNHAAELKYGKLTNLQRQLESAETQLAQRQTNTNSLLREE 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
V IAE++S+WTGIPV++L +E E R+IG EAV AV++++ RSRAG
Sbjct: 537 VTDADIAEIISKWTGIPVSKLVASEMEKLLHLEDELHQRVIGQEEAVTAVSDAIQRSRAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P SF+FLGPTGVGKTEL KALA LFD E+ +VRIDMSEYME+H+V+R+IGAP
Sbjct: 597 LADPNRPIASFIFLGPTGVGKTELGKALAAYLFDTEDAMVRIDMSEYMEKHTVARMIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG++EGGQLTEAVRRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF+
Sbjct: 657 PGYVGYDEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGRTVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
N VIIMTSN+G++H+L +++V+ +R HFRPE LNR+DE+++F L +
Sbjct: 717 NAVIIMTSNIGSQHILDLAGDDSRYSEMQNRVMDAMRSHFRPEFLNRIDELIIFRSLRKD 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
QLR++ +LQ++ +A RL++R ++L ++++ALD + YDP+YGARP++R +++++ T++
Sbjct: 777 QLRRITQLQVQRLAKRLSDRKMSLKLSESALDFLAEVGYDPVYGARPLKRAIQRELETQI 836
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYR 849
++ ++R + E T++ D + + L+++
Sbjct: 837 AKAILRGDFGEGDTIFADV--ENERLIFK 863
>gi|376298110|ref|YP_005169340.1| ATP-dependent chaperone ClpB [Desulfovibrio desulfuricans ND132]
gi|323460672|gb|EGB16537.1| ATP-dependent chaperone ClpB [Desulfovibrio desulfuricans ND132]
Length = 865
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/870 (52%), Positives = 621/870 (71%), Gaps = 28/870 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ + FT KT EA++ A LA +GH Q HL AL++ +G+ Q + G A
Sbjct: 1 MDINTFTRKTQEAVSEAQNLAIRSGHQQIDCEHLMHALVAQENGLAGQILRKLG--VAPD 58
Query: 61 SAERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ + + K+PS + + PD++ + + + + A +K D +++V+ + + L
Sbjct: 59 AYLGAIDAEIAKMPSVSGSGARPDQVMVTQRMQQALVAADDMRKRMKDEYVSVEHVFVAL 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
++ +S +G + K+ G+ +V + +E++RGK+ +V S + + T+++LK YGRDLVE+
Sbjct: 119 MDEPGNSGVGRVNKQFGLDKNKVLAALEEVRGKQ--RVTSDNPEATYESLKKYGRDLVEE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRRV+RILSRRTKNNPVLIGE GVGKTA+ EGLAQRIV+GDVP
Sbjct: 177 ARSGKLDPVIGRDSEIRRVIRILSRRTKNNPVLIGEAGVGKTAIAEGLAQRIVKGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + +LDM ALVAGAKYRGEFEERLKAVLKEV E+EG++I+FIDE+H ++GAG+T+G
Sbjct: 237 LKDKTVFSLDMSALVAGAKYRGEFEERLKAVLKEVAESEGRIIMFIDELHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA+N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EPSV DT+SILR
Sbjct: 297 AMDASNILKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQTVLVEEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGVRI D A+V AA LS+RYIT R LPDKAIDL+DEA A +R ++DSQP E
Sbjct: 357 GLRERFEVHHGVRIADGAIVEAAVLSSRYITDRQLPDKAIDLIDEAAALIRTEIDSQPYE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D R+ MQ EIE AL++E DKAS+ RLVE+ K+L +L++ ++ +++ EK I+
Sbjct: 417 LDTANRQIMQYEIEREALKRETDKASRERLVELEKKLAELKESQSAMLAQWENEKSGIER 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG--NQSDENLMLTE 530
+R LK + E + EA+R D RAA+L YG + ++E + Q D M+ E
Sbjct: 477 LRALKSEIEATRREIDEAKRIPDYNRAAELEYGKLPQLEKELAQRNEALETGDGPRMVRE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
VGPD IA+V+++WTGIPV+RL + E+E+L+ LA +AV AVA++VLR+RA
Sbjct: 537 EVGPDDIAQVIAKWTGIPVSRLMEGEREKLLRLADVLHERVIGQDQAVQAVADAVLRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P GSF+FLGPTGVGKTEL K LA LFD E+ +VRIDMSEYME+H+V+RLIGA
Sbjct: 597 GLKDPTRPIGSFIFLGPTGVGKTELCKTLASALFDTEDNMVRIDMSEYMEKHTVARLIGA 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG++EGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGRLTD GRTVDF
Sbjct: 657 PPGYVGYDEGGQLTEAVRRKPYSVILFDEIEKAHHDVFNVLLQILDDGRLTDSHGRTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVA-RDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NT++IMTSNLGAE++L G+ + DQV + +R+HFRPE LNR+DE V+F PL+
Sbjct: 717 KNTIVIMTSNLGAEYMLDGIDANGEFKPGVEDQVREVLRRHFRPEFLNRVDETVLFRPLT 776
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
EQL + L + + RL +R + L +TD A + +YDP +GARP+ R+L+ + T
Sbjct: 777 REQLIGIIDLLVGGLRKRLEDRNIDLVLTDRAKAFIAESAYDPSFGARPLHRYLQHHLET 836
Query: 819 ELSRMLVREEIDENSTVYIDASPKGDNLVY 848
L++ L+ ++ + TV +D +G+ LV+
Sbjct: 837 PLAKRLIGGDLTDGQTVTVDE--RGEELVF 864
>gi|225574621|ref|ZP_03783231.1| hypothetical protein RUMHYD_02698 [Blautia hydrogenotrophica DSM
10507]
gi|225038166|gb|EEG48412.1| ATP-dependent chaperone protein ClpB [Blautia hydrogenotrophica DSM
10507]
Length = 864
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/871 (52%), Positives = 613/871 (70%), Gaps = 29/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ +A+ + A G+ + HL LL + + I E
Sbjct: 1 MNISKFTQKSLQAVQNLEKTAYEFGNQEVEQEHLLYNLLHQEDSLILKLI-----EKMEI 55
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
E N L ++T ++ L KV+ A+ KA GD++++V+ L L LL+
Sbjct: 56 QKEHFLNTVDNALNARTKVSGGQLYIGQDLNKVLVSAEDEAKAMGDSYVSVEHLFLALLK 115
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
++ I +FKE G+ R + +RG + +V + + + T+ L YG+DLVE+A
Sbjct: 116 YPNTGIKKIFKEYGITRERFLQALSTVRGNQ--QVTTDNPEATYDTLNKYGQDLVEKARE 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA VEGLAQRIVRGDVP L D
Sbjct: 174 QKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAAVEGLAQRIVRGDVPEGLKD 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
++ ALDMGALVAGAKYRGEFEERLKAVL+EV ++EG++ILFIDE+HL++GAG+TEG+MD
Sbjct: 234 KKIFALDMGALVAGAKYRGEFEERLKAVLEEVRKSEGQIILFIDELHLIVGAGKTEGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EPSV DT+SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVLVDEPSVEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE +HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 ERYEVYHGVKITDGALVAAATLSQRYITDRFLPDKAIDLVDEACALIKTELDSMPTELDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ RK MQLEIE AL+KE D SK RL +++EL + RD+ ++ EK ++++++
Sbjct: 414 MRRKIMQLEIEEAALKKETDSLSKERLENLQRELAERRDEFNGRKAQWDNEKHSVEKLQK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
L+++ E+L +++AE+ YDL + A+L+YG + ++ + E + +L L E+V
Sbjct: 474 LREQIEDLNKQIKQAEQSYDLEKMAELQYGELPRLQKTLEIEEQKIKNTDLSLVHESVTD 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGR 583
D+IA ++SRWTGIPV +L + E+ +++GL E V V +++LRS+AG+
Sbjct: 534 DEIARIISRWTGIPVAKLTEGERTKILGLEAQLHKRVVGQDEGVRRVTDAILRSKAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAK LAE LFDDEN +VRIDMSEYME++SVSRLIGAPPGY
Sbjct: 594 PTKPIGSFLFLGPTGVGKTELAKTLAETLFDDENNIVRIDMSEYMEKYSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 654 VGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSN+G+ +LL G+ G+++ + V+ E+R HFRPE LNRLDEI++F PL+ E
Sbjct: 714 LIMTSNIGSTYLLEGIQEDGEISSDCEK-LVMGELRGHFRPEFLNRLDEIILFKPLTKEN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++ L +KD++ RLA++ +AL +TD A V+ YDP+YGARP++R+L+K V T +
Sbjct: 773 IGRIVDLMVKDLSCRLADQELALELTDKAKAYVVDHGYDPVYGARPLKRYLQKHVETLAA 832
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQK 852
+ ++ + + +D + D + R+++
Sbjct: 833 KCILGGNVHAGDVIVLDV--ENDQFITRIKE 861
>gi|78356704|ref|YP_388153.1| ATP-dependent chaperone ClpB [Desulfovibrio alaskensis G20]
gi|78219109|gb|ABB38458.1| ATP-dependent chaperone ClpB [Desulfovibrio alaskensis G20]
Length = 863
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/868 (53%), Positives = 621/868 (71%), Gaps = 26/868 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT K+ +A+ A +A AGH + HLA+AL+ GI + ++ AG A
Sbjct: 1 MDISKFTEKSQQALGEAQNVAVRAGHQEVDVEHLALALVVQEHGIVPRLLDKAGVRPQAF 60
Query: 61 SAERVFNQAMKKLPSQTP--APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+A V + +K P A +I + L +++ +AQ + + D +++V+ + +
Sbjct: 61 AAA-VEAELGRKPAVSGPGSAQGQIFVTQRLNRLLVKAQDSARRLQDEYVSVEHIFCAMA 119
Query: 119 ED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
E+ S +G +F + G+ ++ + ++RG ++V S++ + T++AL YGRDLVE+A
Sbjct: 120 EEPASSPVGRVFAQFGLTQEKLLGVLTQVRG--AQRVTSSNPEDTYEALSRYGRDLVEEA 177
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRD EIRR VRILSRRTKNNPVLIGE GVGKTA+VEGLA RI+ GDVP +L
Sbjct: 178 RKGKLDPVIGRDAEIRRTVRILSRRTKNNPVLIGEAGVGKTAIVEGLAHRILNGDVPESL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D L ALDMGAL+AGAKYRGEFEERLKAVLKEVE+AEG++I+FIDE+H ++GAG+T+G+
Sbjct: 238 RDKSLFALDMGALIAGAKYRGEFEERLKAVLKEVEQAEGRIIMFIDELHTIVGAGKTDGA 297
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ + V EP+V DT+SILRG
Sbjct: 298 MDAGNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPLVVDEPTVEDTISILRG 357
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE++E HHGVRI D ALV A LS RYI R LPDKAIDL+DEA A +R ++DS P E+
Sbjct: 358 LKERFEVHHGVRISDSALVEAVTLSNRYIADRQLPDKAIDLIDEAAALIRTEIDSLPAEL 417
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D RK MQLEIE AL +E D AS+ RL ++ EL +LR+ L ++++EK ID +
Sbjct: 418 DEANRKIMQLEIEREALRRETDAASRERLQKLENELAELREVQAGLNTQWEREKGSIDSV 477
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVG 533
R LK+ E ++EAER YDL RAA+L+Y + ++E + EG + +L E VG
Sbjct: 478 RALKEDIERTRRQIEEAERNYDLNRAAELKYSVLHDLEKRLAATEGGGENGPRLLKEEVG 537
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERLIGLAEAVN-----------AVAESVLRSRAGLG 582
PD +AE+V+RWTGIPVTRL ++E+E+L+ L + ++ AVAE+VLRSRAGL
Sbjct: 538 PDDVAEIVARWTGIPVTRLLESEREKLLRLPDVLHQRVVGQDVAVDAVAEAVLRSRAGLS 597
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTEL K LA+ LFD E+ +VR+DMSEYME+H+V+RLIGAPPG
Sbjct: 598 DPARPIGSFIFLGPTGVGKTELCKTLAQALFDTEDNIVRLDMSEYMEKHTVARLIGAPPG 657
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+++GGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQ+LDDGRLTD GRTVDF+NT
Sbjct: 658 YVGYDDGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQLLDDGRLTDSHGRTVDFKNT 717
Query: 703 VIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
+IIMTSN+GA +L G+ G+ T V D+VL+E+R+HFRPE LNR+DEIV+F PL E
Sbjct: 718 IIIMTSNIGAPLMLDGISPQGEFTEGV-EDRVLEELRRHFRPEFLNRVDEIVLFKPLMLE 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q+ + L M+ + RLAER + +++TD A V +YDP+YGARP++R+L++++ T L
Sbjct: 777 QIMHIVDLLMQRLLGRLAERKIRVSLTDKAKRFVAESAYDPVYGARPLKRYLQQRLETPL 836
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVY 848
+R ++ E+ + V +D G L +
Sbjct: 837 ARRIIAGELRDGQQVTVDTD--GHTLFF 862
>gi|409439213|ref|ZP_11266272.1| Chaperone [Rhizobium mesoamericanum STM3625]
gi|408749118|emb|CCM77451.1| Chaperone [Rhizobium mesoamericanum STM3625]
Length = 867
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/875 (52%), Positives = 607/875 (69%), Gaps = 23/875 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ + I A A + GH QFTP H+ LL D G+ A I AGG+ +
Sbjct: 1 MNIEKYSERVRGFIQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGGD--PK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
+A + A+ KLP + +I + L KV+ A+ A K GD+ + V++L+ L +
Sbjct: 59 AARLANDAALAKLPKVSGGNGQIYLAQPLAKVLSTAEEASKKAGDSFVTVERLLQALAIE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ K AGV + + ++R +GR +S++ + F +LK Y RDL +A G
Sbjct: 119 SSASTSTTLKNAGVTALALNQVINEIR--KGRTADSSNAEQGFDSLKKYARDLTGEAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ G++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 KLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVMVEEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYIT R LPDKAIDL+DEA A +R+Q+DS+PEE+D L
Sbjct: 357 KYEQHHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAAARLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+KE D AS RL + EL L ++ L R++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKKETDSASADRLTRLEAELTGLEEEADALTARWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ +E L A+R+ + RA +L YG I E+E + + E SD + M+ E V PD
Sbjct: 477 KKQLDEARNELAIAQRKGEFQRAGELTYGVIPELEKKLTEAEQQDSDRSAMVQEVVIPDN 536
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA VVSRWTGIPV ++ + E+++L IG +AV AV+ +V R+RAGL P
Sbjct: 537 IAHVVSRWTGIPVDKMLEGERDKLLRMEDELAKSVIGQGDAVQAVSRAVRRARAGLQDPN 596
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDDE +VR+DMSEYME+HSV+RLIGAPPGYVG
Sbjct: 597 RPIGSFIFLGPTGVGKTELTKALARFLFDDETAMVRMDMSEYMEKHSVARLIGAPPGYVG 656
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 657 YDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTMII 716
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L G + ++ R+QV++ VR HFRPE LNR+DEI++F L E++ +
Sbjct: 717 MTSNLGAEYLTQLKEGDDS-EMVREQVMEVVRSHFRPEFLNRIDEIILFHRLKREEMGAI 775
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+K + L+ER + L + D A + + + YDP+YGARP++R ++K V L+ ++
Sbjct: 776 VDIQLKRLVSLLSERKITLELDDDARNWLANKGYDPVYGARPLKRVIQKYVQDPLAEQIL 835
Query: 826 REEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAA 860
++ + STV I + D L++ +N +AA
Sbjct: 836 SGQVPDGSTVKITSG--SDRLLFST-RNSAVNEAA 867
>gi|407981900|ref|ZP_11162588.1| ATP-dependent chaperone protein ClpB [Mycobacterium hassiacum DSM
44199]
gi|407376494|gb|EKF25422.1| ATP-dependent chaperone protein ClpB [Mycobacterium hassiacum DSM
44199]
Length = 848
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/863 (53%), Positives = 607/863 (70%), Gaps = 36/863 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + AT+AG+ Q P HL +ALL+ GI A + G E A
Sbjct: 4 FNP---TTKTQAALTSALQAATAAGNPQIVPAHLLMALLTQNDGIAAPLLEAVGVEPATI 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
+E + + +LP+ T + S + + AQ GD +++ + +++GL
Sbjct: 61 RSE--TQRLLDRLPTVTGTTTQPQLSREALSALNEAQQLATELGDEYVSTEHVMVGLATG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
DS + L G + ++ K+RG GR V + + T+QAL+ Y DL +A GK
Sbjct: 119 DSDVAKLLTGRGASPQALREAFVKVRGS-GR-VTTPDPEATYQALEKYSTDLTARAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D
Sbjct: 177 LDPVIGRDNEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLKDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+IALD+G++VAG+KYRGEFEERLKAVL E++ +EG++I FIDE+H ++GAG T EGSMDA
Sbjct: 237 VIALDLGSMVAGSKYRGEFEERLKAVLDEIKRSEGQIITFIDELHTIVGAGATGEGSMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQVYV EPSV DT+ ILRGLKE
Sbjct: 297 GNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVYVGEPSVEDTIGILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+P EID +
Sbjct: 357 RYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE AL KE+D+ASK RL ++R EL D ++KL L R++ EK I+ +R L
Sbjct: 417 ERLVRRLEIEEMALSKEEDEASKERLAKLRAELADQKEKLAELTTRWQNEKNAIETVREL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLEGNQSDENLMLTETVGPD 535
K++ E L AER + R A+LRYG I EVE + ++ EN+ML E VGPD
Sbjct: 477 KEQLEALKIEADRAEREGNYERVAELRYGRIPEVEKKLEAATPHAEARENVMLKEEVGPD 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
IAEVVS WTGIP R+ + E+ +R++G AV AV+++V RSRAG+ P
Sbjct: 537 DIAEVVSAWTGIPAGRMLEGEQAKLLRMEDELAKRVVGQKRAVQAVSDAVRRSRAGVADP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+PTGSF+FLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RL+GAPPGYV
Sbjct: 597 NRPTGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+++GGQLTEAVRRRPY+V+LFDE+EKAH VF+ LLQVLDDGRLTDGQGRTVDFRNT++
Sbjct: 657 GYDQGGQLTEAVRRRPYTVILFDEIEKAHQDVFDILLQVLDDGRLTDGQGRTVDFRNTIL 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSNLGA + +QV+ VR HF+PE +NRLD+I++FD L+ E+L +
Sbjct: 717 ILTSNLGAGG-------------SEEQVMAAVRAHFKPEFINRLDDIIIFDGLNPEELVQ 763
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+ +A RL++R + L V+D A + +DP YGARP+RR +++ + +L++ML
Sbjct: 764 IVDIQLGQLAKRLSQRRLTLQVSDPAKKWLAQRGFDPQYGARPLRRLIQQAIGDQLAKML 823
Query: 825 VREEIDENSTVYIDASPKGDNLV 847
+ ++ + V ++ +P GD+LV
Sbjct: 824 LSGQVHDGDVVPVNVAPDGDSLV 846
>gi|254413004|ref|ZP_05026776.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
gi|196180168|gb|EDX75160.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
Length = 875
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/855 (51%), Positives = 616/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP+ FT K EA+A ++ +A Q HL ALL + G+ +N A + Q
Sbjct: 5 NPNLFTEKAWEALAHTPDVVKAAQQQQIESEHLMKALL-EQEGLAISILNKA--QIPVQR 61
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ +++ P + + I +L ++ RA +K D +++V+ L+L ++D
Sbjct: 62 IREATDAFIQRQPKVSGSSSSIYMGRSLDTLLDRADGYRKEFNDDYISVEHLMLAYVKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E + +++ + ++RG + ++ G ++AL YGRDL E A GKL
Sbjct: 122 RFGKSLFQEFKLDEQTLRTTITQIRGNQTVTDQNPEG--KYEALDKYGRDLTEAAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR V+ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKEV +++G++I+FIDEIH V+GAG T+GSMDA N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEVTDSKGQIIMFIDEIHTVVGAGATQGSMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQV+V +PSV DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYLEKDAALERRFQQVFVDQPSVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDE+ A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKISDSALVAAATLSTRYISDRFLPDKAIDLVDESAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+K+ D AS RL + +EL +L++ + L +++ EK+ +D I+ +K+
Sbjct: 420 KILQLEMEKLSLQKDSDPASMERLERLEQELANLKEAQRTLNAQWQSEKDVLDRIQGIKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTETVGP 534
+ + + + +AER Y+L RAA+L+YG + E ++A+ QL Q+ +L E V
Sbjct: 480 EIDRVNIEISQAEREYNLNRAAELKYGKLAELQRSLQASEQQLNDTQTSGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L +G EAV AVA+++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEKEKLLQLEDELHQRVVGQEEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E+ LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALAAYLFDTEDALVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTE++RRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QG TVDF+NTV
Sbjct: 660 IGYEEGGQLTESIRRRPYAVILFDEIEKAHNDVFNIMLQILDDGRVTDAQGHTVDFKNTV 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L R +V++ +R FRPE LNR+DE+++F L QLR
Sbjct: 720 IIMTSNIGSQYILDLAGDDTHYDEMRGRVMEAMRTSFRPEFLNRIDEVIIFHALQKHQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ LQ + + RLAER +AL +++AA+D + YDP++GARP++R +++++ T+L++
Sbjct: 780 HIVSLQTQLLEKRLAERQMALKLSEAAIDYLAEVGYDPVFGARPLKRAIQRELETQLAKA 839
Query: 824 LVREEIDENSTVYID 838
++R E + T+++D
Sbjct: 840 MLRGEFSDGDTIFVD 854
>gi|81299898|ref|YP_400106.1| ATPase [Synechococcus elongatus PCC 7942]
gi|81168779|gb|ABB57119.1| ATPase [Synechococcus elongatus PCC 7942]
Length = 883
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/868 (50%), Positives = 631/868 (72%), Gaps = 29/868 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA-- 59
NP++FT K EAI ++A A H Q HL +ALL +P G+ + AG E A
Sbjct: 14 NPNQFTEKAWEAIVRTTDVAKQAQHQQIESEHLFLALLQEP-GLALNILKKAGLEAAQLQ 72
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
Q ER + + P + + +L +++ +A +K GD ++V+ LIL
Sbjct: 73 QFTERF----IARQPKVSGGNQSVYLGRSLDQLLDQADQFRKDFGDEFISVEHLILSFPR 128
Query: 120 DSQIGDLF-KEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
DS+ G L +E V +++ ++++RG + KV + + ++AL+ YGRDL E A G
Sbjct: 129 DSRFGRLLSQEFKVDEKQLRQIIQQIRGSQ--KVTDQNPEGKYEALEKYGRDLTEMARRG 186
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D
Sbjct: 187 KLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPQSLKDR 246
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RLIALDMGAL+AGAK+RGEFEERLKAVLKEV ++EG +ILFIDEIH V+GAG +GSMDA
Sbjct: 247 RLIALDMGALIAGAKFRGEFEERLKAVLKEVTDSEGIIILFIDEIHTVVGAGAVQGSMDA 306
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KPMLARG+LRCIGATTL+EYR+Y+EKDAA ERRFQQV+V +P+V DT+SILRGLKE
Sbjct: 307 GNLLKPMLARGELRCIGATTLDEYRQYIEKDAALERRFQQVFVDQPTVEDTISILRGLKE 366
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYI+ R LPDKAIDLVDE+ A +++++ S+PEE+D +
Sbjct: 367 RYEVHHGVRISDNALVAAAVLSTRYISDRFLPDKAIDLVDESAARLKMEITSKPEELDEI 426
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK +QLE+E +L+KE D AS+ RL + KEL DL+++ + L +++ EK+ I +I+ +
Sbjct: 427 DRKILQLEMERLSLQKESDLASQERLQRLEKELADLKEEQRSLSSQWQAEKDVITDIQSV 486
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG----NQSDENLMLTETV 532
K++ +++ +Q+AER YDL +AA+L+YG + E++ + ++EG + +L E V
Sbjct: 487 KEEIDQVNLLIQQAERDYDLNKAAELKYGKLTELQRKLNEMEGGLATTHTSGKSLLREEV 546
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGL 581
IAE++S+WTGIPV++L ++E +R+IG EAV+AVA+++ RSRAGL
Sbjct: 547 TEVDIAEIISKWTGIPVSKLVESEMQKLLNLDEELHQRVIGQEEAVSAVADAIQRSRAGL 606
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P++P SF+FLGPTGVGKTELAKALA LFD E+ ++RIDMSEYME+H+VSRLIGAPP
Sbjct: 607 SDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIGAPP 666
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD +GRTVDF+N
Sbjct: 667 GYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGRTVDFKN 726
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T++I+TSN+G++++L + R +V + +R +FRPE LNR+DE ++F L +Q
Sbjct: 727 TILILTSNIGSQYILDVAGDDSRYEEMRSRVTEALRANFRPEFLNRVDETIIFHSLRKDQ 786
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L+++ R+Q+ + RL++R ++L+++ A+D ++ +DP+YGARP++R +++++ T ++
Sbjct: 787 LQQIVRIQLHRLEERLSDRKLSLSMSPEAIDFLVEIGFDPVYGARPLKRVIQRELETAIA 846
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYR 849
+ ++R + + T+ + + + + LV++
Sbjct: 847 KAILRGQFSDGDTIQV--AVENERLVFK 872
>gi|298491220|ref|YP_003721397.1| ATP-dependent chaperone ClpB ['Nostoc azollae' 0708]
gi|298233138|gb|ADI64274.1| ATP-dependent chaperone ClpB ['Nostoc azollae' 0708]
Length = 872
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/855 (51%), Positives = 614/855 (71%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT + EAIA ++A Q HL ALL + AI G N Q
Sbjct: 5 NPNQFTERAWEAIAHTPDIAKQYQQQQLETEHLMKALLEQDG--LSNAIFTKAGANL-QK 61
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+Q + + P + + +L ++ RA ++ D +++V+ ++LG +D
Sbjct: 62 VRDYTDQFILRQPKVSGTSSSVYLGRSLDTLLDRADKYRQEFKDEYISVEHILLGYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G L +E G+ ++++ ++++RG + V S + +Q+L+ YGRDL E A G+L
Sbjct: 122 RFGKSLLQEFGLDEGKLENIIKQIRGNQ--TVTDQSPEGKYQSLERYGRDLTEAARLGQL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVTGDVPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGALVAGAK+RGEFEERLKAVLKEV E+ G ++LFIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDMGALVAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPDVQDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D +LV AA LS+RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKISDSSLVAAATLSSRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + KEL D +++ L ++++ EK+ I +I+ +K+
Sbjct: 420 KIIQLEMEKLSLQKESDLASRERLERLEKELTDFKEEQSTLRIQWQSEKDIITKIQSIKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG + +++EA +L Q +L E V
Sbjct: 480 ETDRVNLEIQQAERNYDLNRAAELKYGKLTDLHRQLEAVESELANAQGTGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE R++G AEAV AVA+++ RSRAGL
Sbjct: 540 ADIAEIISKWTGIPISKLVESEKEKLLHLEDELHHRIVGQAEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA +FD E LVRIDMSEYM++H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFVFLGPTGVGKTELAKALAAYMFDSEESLVRIDMSEYMDKHTVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPY+V+LFDE+EKAH VFN LLQ+LDDGR+TD Q RTVDF+NT+
Sbjct: 660 VGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNILLQILDDGRVTDSQARTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L R +V++ +R FRPE LNR+DE+++F L +LR
Sbjct: 720 IIMTSNIGSQYILDFAGDDSRYSEMRHRVMEAMRNSFRPEFLNRIDEVIIFHSLQKSELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ+ + RL+++ ++L + AALD + YDP++GARP++R +++++ T++++
Sbjct: 780 QIVQLQVDRLRQRLSDKKMSLRLAGAALDFLAQVGYDPVFGARPLKRAIQRELETQIAKA 839
Query: 824 LVREEIDENSTVYID 838
++R E + T+++D
Sbjct: 840 ILRGEFSDGDTIFVD 854
>gi|421597229|ref|ZP_16040885.1| ATP-dependent protease, ATP-binding subunit [Bradyrhizobium sp.
CCGE-LA001]
gi|404270657|gb|EJZ34681.1| ATP-dependent protease, ATP-binding subunit [Bradyrhizobium sp.
CCGE-LA001]
Length = 879
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/864 (52%), Positives = 612/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T ++ I A LA GH QF LH+ LL D G+ A I+ AGG + A
Sbjct: 1 MNIEKYTERSRGFIQSAQSLAMREGHQQFFTLHVLKVLLDDNEGLAAGLIDRAGGNSRA- 59
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ A+ K+P + +I + L + A+ A + GD+ + V++L+LGL
Sbjct: 60 -ILKATEDALGKVPKVSGGGAGQIYLAPELARTFDAAEKAGEKAGDSFVTVERLLLGLTL 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ S+ G + + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 EKTSEAGTILNKGGVTPQNLNAAIEALR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LD+GAL+AGAKYRGEFEERLKAVL+EV +EG ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLSLDLGALIAGAKYRGEFEERLKAVLQEVTGSEGTFILFIDEMHTLIGAGKGDGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EY+K+VEKDAA RRFQ ++V+EPSV DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPIFVSEPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRITDSALVAATTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ ++L+IE AL+KE D SK+RL + K+L DL +K L R+ EK ++ + ++
Sbjct: 417 LDREIIRLKIEQEALKKESDVGSKSRLQTLEKDLADLEEKSAALTARWSAEKNKLSDAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + +A +L YG+I ++E +G++E ++ M+ E V +
Sbjct: 477 LKAELDGLRVELANAQRRGEFQKAGELAYGSIPQLEKQLGEIEAKENSGE-MMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EKE+L +G AEAV AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKEKLLKMEEQLSKRVVGQAEAVRAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+PTGSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPTGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E+L++ G+ T V R+QV+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSEYLVNQPEGEDTSAV-REQVMGMVRAHFRPEFLNRVDEIILFHRLQRSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L +R + L + A D + A+ +DP YGARP++R +++ + L+ M+
Sbjct: 775 IVEIQFARLQKLLTDRKIVLTLDAAGRDWLAAKGWDPAYGARPLKRVIQRYLQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ ++ + V I S +G+ L +
Sbjct: 835 LGGDVRDGDNVAI--SSEGNVLTF 856
>gi|428769477|ref|YP_007161267.1| ATP-dependent chaperone ClpB [Cyanobacterium aponinum PCC 10605]
gi|428683756|gb|AFZ53223.1| ATP-dependent chaperone ClpB [Cyanobacterium aponinum PCC 10605]
Length = 873
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/855 (52%), Positives = 613/855 (71%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP +FT K EAI ++A + H Q HL +LL A +I N + +
Sbjct: 5 NPQQFTEKAWEAIVKTPDIAKQSQHQQIESEHLLKSLLEQQG--LATSIFNKADISLTRL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R ++ + + P D + +L ++ RA+ +K D ++++ +ILG +D
Sbjct: 63 RDRT-DEFINRQPKVKNVSDSVYLGKSLDTLLDRAEKYRKEFEDDFISIEHIILGYAQDE 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G +L +E + ++K+ ++++RG + KV + + +++L YGRDL E A GKL
Sbjct: 122 RFGKNLLREFNLDENQLKTIIKEIRGSQ--KVTDQNPEGKYESLTKYGRDLTELARQGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+E+RR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D L
Sbjct: 180 DPVIGRDDEVRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLLDRTL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFEERLKAVLKEV E+EG +ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKYRGEFEERLKAVLKEVTESEGNIILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ VYV EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQSVYVGEPNVIDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYIT R LPDKAIDLVDE+ A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADNALVAAAMLSNRYITDRFLPDKAIDLVDESAAKLKMEITSKPEELDEVDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D ASK RL ++ +EL +L+++ +++ EK+ IDEIR L++
Sbjct: 420 KILQLEMERLSLKKEDDPASKERLAKLEQELGNLKEQQSAFNAQWQSEKDIIDEIRNLRE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG----NQSDENLMLTETVGP 534
E + +Q+AER YD +AA+LRYG + +++ I E Q+ +L E V
Sbjct: 480 SIERVNVEIQQAERDYDYNKAAELRYGKLNDLQQQIKDKETALAEKQTTGKSLLREEVEE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L IG EAV AV+E++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEKEKLLHLESQLHERVIGQDEAVIAVSEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+H+VSRL+GAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALAGILFDTEEAIVRIDMSEYMEKHTVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPYSVVLFDE+EKAH VFN +LQ+LDDGRLTD QGRTVDF NT+
Sbjct: 660 VGYEEGGQLTEAIRRRPYSVVLFDEIEKAHPDVFNVMLQILDDGRLTDSQGRTVDFSNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++ +L + R +V+ +R +FRPE LNR+DEI++F L QLR
Sbjct: 720 IIMTSNIGSQFILDVSGDDSKYEQMRSRVMDAMRANFRPEFLNRIDEIIIFHSLEKSQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ+ + RLAE+ ++L+++++ALD + YDP+YGARP++R ++K + T +++
Sbjct: 780 HIVKLQVARLETRLAEQKLSLSLSESALDFLAEIGYDPVYGARPLKRAVQKYLETAIAKS 839
Query: 824 LVREEIDENSTVYID 838
+++ E + T+++D
Sbjct: 840 ILKGEFKDGDTIFVD 854
>gi|347531008|ref|YP_004837771.1| heat shock protein ClpB-like protein [Roseburia hominis A2-183]
gi|345501156|gb|AEN95839.1| heat shock protein ClpB-like protein [Roseburia hominis A2-183]
Length = 861
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/859 (52%), Positives = 611/859 (71%), Gaps = 27/859 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EAI +LA G+ + HL VAL+ G+ + I E
Sbjct: 1 MNIQKFTQKSVEAINDCEKLAYEYGNQEIEQEHLLVALMRQEDGLIPKLI-----EKMEI 55
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
E + A + L ++ ++ L KV+ A+ K GD +++V+ L L L++
Sbjct: 56 QKEHFMDNAERHLAARVKVSGGQVYVGQDLNKVLIHAEDEAKQMGDEYVSVEHLFLALIK 115
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ + ++FKE G+ R + +RG + +V S + + T+ L+ YG D+V +A
Sbjct: 116 YPNKALKEIFKEYGITRERFLQALSTVRGNQ--RVTSDNPEATYDTLEKYGYDMVARARD 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD+EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVP L D
Sbjct: 174 QKLDPVIGRDDEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPEGLKD 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L ALDMGAL+AGAKYRGEFEERLKAVL EV+ +EG++ILFIDE+H ++GAG+T+G+MD
Sbjct: 234 KKLFALDMGALIAGAKYRGEFEERLKAVLDEVKSSEGQIILFIDELHTIVGAGKTDGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A L KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRGLK
Sbjct: 294 AGQLLKPMLARGELHCIGATTLDEYREYIEKDAALERRFQPVMVDEPTVEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 ERYEVFHGVKITDSALVSAAVLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L R+ MQ+EIE AL+KE D+ S+ RL ++KEL +LRD+ +++ EK+ ++++++
Sbjct: 414 LNRRVMQMEIEETALKKETDRLSQERLANLQKELAELRDEFNTKKAQWENEKKSVEKVQK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
L+++ E + ++ A+++YDL +AA+L+YG + +++ + E +L L E V
Sbjct: 474 LREEIEAVKNEIKMAQQKYDLEKAAELQYGKLPQLQKQLEIEEEAVKKRDLSLVHENVSE 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA ++SRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+
Sbjct: 534 EEIARIISRWTGIPVAKLTESERNKTLHLDEELHKRVIGQDEGVTKVTEAIIRSKAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAKALA LFDDE+ +VR+DMSEYME++SVSRLIGAPPGY
Sbjct: 594 PSKPIGSFLFLGPTGVGKTELAKALAASLFDDESNMVRLDMSEYMEKYSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 654 VGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
IIMTSNLG+ HLL G+ G + + V+ E+R HFRPE LNRLDEI++F PL+ +
Sbjct: 714 IIMTSNLGSAHLLEGIDANGDINPE-CEAAVMDELRGHFRPEFLNRLDEIIMFKPLTKDN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L + D+ RLA+R + + +TDAA ++ YDPIYGARP++R+L+K V T +
Sbjct: 773 IGNIINLLVADLNKRLADREITVELTDAAKQYIVENGYDPIYGARPLKRFLQKHVETLSA 832
Query: 822 RMLVREEIDENSTVYIDAS 840
++++ +++ E T+ ID S
Sbjct: 833 KLILADKVREGDTILIDVS 851
>gi|315651518|ref|ZP_07904538.1| chaperone protein ClpB [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486173|gb|EFU76535.1| chaperone protein ClpB [Lachnoanaerobaculum saburreum DSM 3986]
Length = 863
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/860 (52%), Positives = 613/860 (71%), Gaps = 26/860 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EA+ ++A + G+ Q +HL +LL + I G
Sbjct: 1 MNISKFTQKSIEAVQNMEKVAATHGNQQIEQIHLLASLLDIDGSLIVNLIKKMGINEIEF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E A++KLP + I L K++ A+ K+ GD +++V+ + L ++E+
Sbjct: 61 RNE--VEAAIEKLPKVSGGQSYI--GNDLNKILITAEDVAKSMGDEYVSVEHIFLNMIEN 116
Query: 121 --SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
S I +F+ G+ + + ++RG + +V S + + T+ L YG DLVE+A
Sbjct: 117 PSSDIAQIFRMYGIDKDKFLKVLSEVRGNQ--RVVSDNPEATYDTLNKYGYDLVERARAQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLA RIV GDVP+NL D
Sbjct: 175 KLDPVIGRDSEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAGRIVAGDVPNNLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL ALDMGAL+AGAKYRGEFEERLKAVL EV+++ G++ILFIDE+H ++GAG+TEGSMDA
Sbjct: 235 RLFALDMGALIAGAKYRGEFEERLKAVLDEVKKSNGEIILFIDELHTIVGAGKTEGSMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EPSV DT+SILRGLKE
Sbjct: 295 GNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVEEPSVEDTISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +L+S P EID L
Sbjct: 355 RYESYHGVKITDGALVSAAVLSDRYISDRFLPDKAIDLVDEACALIKTELNSVPTEIDEL 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK+MQL+IE AL+KE D SK RL ++KEL ++ D+L +++ EK+ ++ + +L
Sbjct: 415 NRKQMQLQIEETALKKEDDNLSKERLEALQKELAEVNDELNAAKSKWENEKKSVEGLAKL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL-MLTETVGPD 535
+ + +E+ + A++ YDL +AA+L+YG + E++ + E E+L +L E+V D
Sbjct: 475 RGEIDEVNRQISAAKQSYDLNKAAELQYGKLPELKKRLQAEEEKVKKEDLSLLRESVTDD 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA ++SRWT IPV++L ++E+ ER+IG EAV+ V ++++RSRAG+ P
Sbjct: 535 EIARIISRWTNIPVSKLNESEREKTLHLADTLHERVIGQDEAVDKVTDAIIRSRAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAK+LA LFDDEN ++RIDMSEYME+ SVSRLIGAPPGYV
Sbjct: 595 SKPIGSFLFLGPTGVGKTELAKSLARALFDDENNMIRIDMSEYMEKFSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD G+TVDF+NT+I
Sbjct: 655 GYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRVTDSLGKTVDFKNTII 714
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+ +LL G+ G ++ ARD+V+ E+R FRPE LNRLDEI++F PL+ + +
Sbjct: 715 IMTSNIGSAYLLDGINTYGDISDN-ARDKVMNELRNSFRPEFLNRLDEIIMFKPLTKDNI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L + ++ +RL ++ + + ++DAA + ++ YDP YGARP++R+L+K V T +++
Sbjct: 774 GGIISLLIDELNLRLKDKELTVELSDAAKNYIIDNGYDPAYGARPLKRYLQKNVETMVAK 833
Query: 823 MLVRE-EIDENSTVYIDASP 841
+++ + E+ +YID P
Sbjct: 834 LILSDGELRAKDIIYIDLDP 853
>gi|222053891|ref|YP_002536253.1| ATP-dependent chaperone ClpB [Geobacter daltonii FRC-32]
gi|221563180|gb|ACM19152.1| ATP-dependent chaperone ClpB [Geobacter daltonii FRC-32]
Length = 866
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/867 (52%), Positives = 600/867 (69%), Gaps = 24/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+ P+K T KT EA++ A E A G++ P HL A+L G+ + G
Sbjct: 2 IRPEKMTIKTQEALSQAQEAAAQRGNSAIEPEHLLSAMLGQEGGLTGSILQKMG--VTPN 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
+A++KLP + A ++ S TL V+ AQ D ++ + L+L L+
Sbjct: 60 LVNERLAEALRKLPRASGATMQVFLSPTLNHVLDAAQKEADTMKDAFVSTEHLLLALVGE 119
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ S I + +E+GV + + ++ +RG E K+ + + +QAL Y RDL + A G
Sbjct: 120 KGSIIAGILRESGVTREGILAALKDIRGDE--KITDQAAEDKYQALTKYARDLTDLARRG 177
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ GDVP L D
Sbjct: 178 KLDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIISGDVPETLRDK 237
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFE+RLKAV+KEVE+AEGK+ILFIDE+H ++GAG EG+MDA
Sbjct: 238 KLVALDMGALIAGAKYRGEFEDRLKAVIKEVEKAEGKIILFIDELHTLVGAGAAEGAMDA 297
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+N+ KP LARG+L CIGATTL EYRK++EKDAA ERRFQQVY EPSV DT++ILRGLKE
Sbjct: 298 SNMLKPALARGELHCIGATTLNEYRKHIEKDAALERRFQQVYAGEPSVEDTIAILRGLKE 357
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE +H VRI+D A++ AA LS RYIT R LPDKAIDL+DEA + +R+++DS P EID +
Sbjct: 358 RYENYHSVRIKDSAIIAAATLSDRYITDRFLPDKAIDLIDEAASRLRIEIDSMPTEIDEV 417
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ERK +QLEIE AL +E+D +K RL ++ EL++LR L ++++EK + I L
Sbjct: 418 ERKVIQLEIEKQALLREQDPHAKERLRKISDELEELRSSSATLKSQWQQEKSLLTSISDL 477
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG---NQSDENLMLTETVG 533
K++ EE +++ER DLA A LRYG I +E I + E ML E V
Sbjct: 478 KKQLEEKKEQAKKSEREGDLALTAKLRYGEIPAIEKDIADKSNELLQKQKEGKMLPEEVD 537
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
D +AE+V++WTGIPV R+ + E E+L +G EA+ VA +V RSR+GL
Sbjct: 538 GDMVAEIVAKWTGIPVNRMLETESEKLVRMEERLKGRVVGQDEALELVANAVRRSRSGLS 597
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTE A+ALAE LFDD+ +VRIDMSEY E+H+V+RLIGAPPG
Sbjct: 598 DPNRPIGSFIFLGPTGVGKTETARALAEFLFDDDQAIVRIDMSEYQERHTVARLIGAPPG 657
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEA+RRRPYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 658 YVGYEEGGQLTEAIRRRPYSIVLFDEIEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNT 717
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
VIIMTSNLG++ + G R V+ +R++F+PE LNR+DEI+++ L EQ+
Sbjct: 718 VIIMTSNLGSQFIQQYASGDYAKM--RTMVMGTLRENFKPEFLNRIDEIIIYHSLPLEQI 775
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ + LQ+K + RLAER + L +T A + + E YDP YGARP++R L+KKV L+
Sbjct: 776 KHIVSLQIKGLQKRLAERNLGLEITGRASEYLAKEGYDPAYGARPLKRTLQKKVQDPLAL 835
Query: 823 MLVREEIDENSTVYIDASPKGDNLVYR 849
ML++ + E TV +D + GD+LV +
Sbjct: 836 MLLQGKFQEGDTVVVDVAMDGDSLVIK 862
>gi|402312330|ref|ZP_10831256.1| ATP-dependent chaperone protein ClpB [Lachnospiraceae bacterium
ICM7]
gi|400370184|gb|EJP23178.1| ATP-dependent chaperone protein ClpB [Lachnospiraceae bacterium
ICM7]
Length = 863
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/872 (51%), Positives = 618/872 (70%), Gaps = 29/872 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG-GENAA 59
MN KFT K+ EA+ ++A + G+ Q +HL +LL + I G EN
Sbjct: 1 MNISKFTQKSIEAVQNMEKVAATHGNQQIEQIHLLASLLDIDGSLIVNLIKKMGINENEF 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
++ A++KLP + I S L V+ A+ K GD +++V+ + L LLE
Sbjct: 61 RNE---VESAIEKLPKVSGGNSYI--SNDLNNVLITAEDVAKGMGDEYVSVEHIFLNLLE 115
Query: 120 D--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ S + +F+ G+ + + ++RG + +V S + + T+ L YG DLVE+A
Sbjct: 116 NPSSNVAQIFRMYGINKNKFLQVLSEVRGNQ--RVVSDNPEATYDTLNKYGYDLVERARQ 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLA RIV GDVP+NL D
Sbjct: 174 QKLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAGRIVAGDVPNNLKD 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L ALDMGAL+AGAKYRGEFEERLKAVL EV ++EG++ILFIDE+H ++GAG+TEGSMD
Sbjct: 234 KKLFALDMGALIAGAKYRGEFEERLKAVLDEVRKSEGEIILFIDELHTIVGAGKTEGSMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EP++ DT+SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVEEPTIEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
++YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +L+S P EID
Sbjct: 354 DRYEAYHGVKITDGALVSAAVLSDRYISDRFLPDKAIDLVDEACALIKTELNSVPTEIDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L R++MQL+IE AL+KE D SK RL ++KEL ++ D+L +++ EK+ ++ + +
Sbjct: 414 LSRRQMQLQIEETALKKENDNLSKERLEALQKELAEVNDELNEAKSKWENEKKSVEGLAK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL-MLTETVGP 534
L+ + +E+ + A++ YDL RAA+L+YG + E++ + E E+L +L E+V
Sbjct: 474 LRGEIDEVNRQINAAKQSYDLNRAAELQYGKLPELQKQLQIEEEKVKKEDLRLLRESVTD 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA ++SRWT IPV++L ++E+ ER+IG EAV V ++++RSRAG+
Sbjct: 534 EEIARIISRWTNIPVSKLSESEREKTLHLGDTLHERVIGQDEAVEKVTDAIIRSRAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAK+LA+ LFDDEN ++RIDMSEYME+ SVSRLIGAPPGY
Sbjct: 594 PSKPIGSFLFLGPTGVGKTELAKSLAKSLFDDENNMIRIDMSEYMEKFSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD G+TVDF+NT+
Sbjct: 654 VGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRVTDSLGKTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
IIMTSNLG+ +LL G+ G +T + AR +V+ E+R FRPE LNRLDEI++F PL+ +
Sbjct: 714 IIMTSNLGSAYLLDGINTYGDIT-EDARKKVMDELRNSFRPEFLNRLDEIIMFKPLTKDN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L M ++ RL + + + ++DAA + ++ YDP YGARP++R+L+K V T ++
Sbjct: 773 IGNIINLLMDELNERLESKELKVELSDAAKNYIIDNGYDPAYGARPLKRYLQKNVETMVA 832
Query: 822 RMLVRE-EIDENSTVYIDASPKGDNLVYRVQK 852
++++ + E+ +YID P + L VQK
Sbjct: 833 KLILSDSELKAKDIIYIDLDPYNE-LTAVVQK 863
>gi|91978556|ref|YP_571215.1| ATPase [Rhodopseudomonas palustris BisB5]
gi|91685012|gb|ABE41314.1| ATPase AAA-2 [Rhodopseudomonas palustris BisB5]
Length = 879
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/883 (53%), Positives = 619/883 (70%), Gaps = 31/883 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MN +K+T + I A LA GH QF+PLH+ LL D G+ I+ AGG + A
Sbjct: 1 MNIEKYTERVRGFIQSAQSLAVREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGNSRAI 60
Query: 60 -QSAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILG 116
QS E A+ K+P S + A A T QAA+KA GD+ + V++L+L
Sbjct: 61 LQSTE----AALSKMPKVSGSGAGQVYLAPATARAFDAAEQAAEKA-GDSFVTVERLLLA 115
Query: 117 LLED--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
L D S G L + GV + S + LR +GR +SA+ + + ALK Y RDL +
Sbjct: 116 LALDRESDAGQLLAKGGVTPQNLNSAINALR--KGRTADSATAENAYDALKKYSRDLTQA 173
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP +
Sbjct: 174 ARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPES 233
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D +L++LD+GAL+AGAKYRGEFEERLKAVL EV AEG +ILFIDE+H ++GAG+ +G
Sbjct: 234 LKDKKLLSLDLGALIAGAKYRGEFEERLKAVLSEVTSAEGGIILFIDEMHTLIGAGKADG 293
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA+NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ ++V+EP+V DTVSILR
Sbjct: 294 AMDASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPIFVSEPTVEDTVSILR 353
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLK+KYE HHGVRI D ALV A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE
Sbjct: 354 GLKDKYEQHHGVRISDSALVAAVTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEE 413
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D+++R+ ++L+IE AL+KE D S+ RLV + KEL DL +K L R+ EK ++ +
Sbjct: 414 LDSMDREIVRLKIEQEALKKETDTGSRTRLVTLEKELADLEEKSAALTARWSAEKNKLSD 473
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETV 532
++LK + + L L +A+RR + RA +L YG I E+E + +E N+ + M+ E V
Sbjct: 474 AQKLKSELDGLRLELADAQRRGEYQRAGELAYGRIPELEKKLADIEANE-NAGEMMEEAV 532
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
+ IA+VVSRWTG+PV ++ + EKE+L +G EAV+AV+ +V R+RAGL
Sbjct: 533 TANHIAQVVSRWTGVPVDKMLEGEKEKLLRMEDQIGKRVVGQFEAVHAVSTAVRRARAGL 592
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTEL KALA+ LFDDE +VR+DMSEYME+HSVSRLIGAPP
Sbjct: 593 QDPNRPMGSFMFLGPTGVGKTELTKALAQYLFDDETAMVRLDMSEYMEKHSVSRLIGAPP 652
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRN
Sbjct: 653 GYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRN 712
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+I+MTSNLG+E+L++ G+ T +V R+QV+ VR HFRPE LNR+DEI++F L +
Sbjct: 713 TLIVMTSNLGSEYLVNQPEGEDT-EVVREQVIGMVRGHFRPEFLNRVDEIILFHRLQKTE 771
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++ +Q+ +A L +R + L + AA D + + +DP YGARP++R +++ V L+
Sbjct: 772 MGRIVDIQLGRLAKLLEDRKIVLDLDPAARDWLAEKGWDPAYGARPLKRVIQRHVQDPLA 831
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQ-KNGGFVDAATGR 863
M++ + + V I S +G L + Q +G + TGR
Sbjct: 832 EMILDGTVKDGDQVAI--STEGGALTFNGQPPHGADIAPFTGR 872
>gi|399037187|ref|ZP_10734066.1| ATP-dependent chaperone ClpB [Rhizobium sp. CF122]
gi|398065179|gb|EJL56830.1| ATP-dependent chaperone ClpB [Rhizobium sp. CF122]
Length = 867
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/869 (53%), Positives = 605/869 (69%), Gaps = 22/869 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ + I A A + GH QFTP H+ LL D G+ A I AGG+ +
Sbjct: 1 MNIEKYSERVRGFIQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGGD--PK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
+A + A+ KLP + +I + L KV+ A+ A K GD+ + V++L+ L +
Sbjct: 59 AARLANDAALAKLPKVSGGNGQIYLAQPLAKVLSTAEEAAKKAGDSFVTVERLLQALAIE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ K AGV + + ++R +GR +S++ + F +LK Y RDL +A G
Sbjct: 119 SSASTSTTLKNAGVTALALNQVINEIR--KGRTADSSNAEQGFDSLKKYARDLTGEAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ G++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 KLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVMVEEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYIT R LPDKAIDL+DEA A +R+Q+DS+PEE+D L
Sbjct: 357 KYEQHHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAAARLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+KE D AS RLV + EL L ++ L R++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKKETDTASADRLVRLETELTGLEEEADALTARWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ +E L A+R+ + RA +L YG I E+E +G+ E SD + M+ E V PD
Sbjct: 477 KKQLDEARNELAIAQRKGEFQRAGELTYGVIPELEKKLGEAEQQDSDRSAMVQEVVTPDN 536
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA VVSRWTGIPV ++ + E+++L IG +AV AV+ +V R+RAGL P
Sbjct: 537 IAHVVSRWTGIPVDKMLEGERDKLLRMEDELAKSVIGQGDAVQAVSRAVRRARAGLQDPN 596
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDDE +VR+DMSEYME+HSV+RLIGAPPGYVG
Sbjct: 597 RPIGSFIFLGPTGVGKTELTKALARFLFDDETAMVRMDMSEYMEKHSVARLIGAPPGYVG 656
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 657 YDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTMII 716
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L G + +V R+QV++ VR HFRPE LNR+DEI++F L E++ +
Sbjct: 717 MTSNLGAEYLTQLKEGDDS-EVVREQVMEVVRSHFRPEFLNRIDEIILFHRLKREEMGAI 775
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+K + LAER + L + D A + + YDP+YGARP++R ++K V L+ ++
Sbjct: 776 VDIQLKRLVALLAERKITLELDDDARTWLANKGYDPVYGARPLKRVIQKYVQDPLAEQIL 835
Query: 826 REEIDENSTVYIDASPKGDNLVYRVQKNG 854
++ + STV I + D L++R +
Sbjct: 836 SGQVPDGSTVKITSGT--DRLLFRTRNTA 862
>gi|430005294|emb|CCF21095.1| Chaperone [Rhizobium sp.]
Length = 868
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/875 (52%), Positives = 603/875 (68%), Gaps = 22/875 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN D ++ + + A A S GH QFTP H+ LL D G+ + I AGG+ +
Sbjct: 1 MNIDTYSERVRGFLQSAQTHALSEGHQQFTPEHVLKVLLDDDQGMASSLITRAGGD--PK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
A + A+ KLP + ++ S L KV A+ A K GD+ + V++L+L L +
Sbjct: 59 EARLANDAALAKLPKVSGGGGQVYLSQPLAKVFTTAEEAAKKAGDSFVTVERLLLALAIE 118
Query: 121 S--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
S K+AGV + + ++R +GR +SA+ + F ALK Y RDL +A G
Sbjct: 119 STASTSATLKKAGVTAQALNQVINEVR--KGRTADSANAEQGFDALKKYARDLTAEAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMG+L+AGAKYRGEFEERLKAVL EV+ G++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 KLMALDMGSLIAGAKYRGEFEERLKAVLNEVQAESGEIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVMVDEPTVGDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+D L
Sbjct: 357 KYEQHHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL+KE D AS RL + EL L ++ L R++ EK+++ L
Sbjct: 417 DRRIIQLKIEREALKKETDTASADRLSRLESELASLEEQADALTARWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ +E L A+R + RA +L YG I +E + E S N M+ E V PD
Sbjct: 477 KKQLDEARNELAIAQRSGEFQRAGELAYGVIPGLEKDLAAAEAQDSSTNAMVQEVVSPDN 536
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA VVSRWTGIPV ++ + E+++L +G +AV AV+ +V RSRAGL P
Sbjct: 537 IAHVVSRWTGIPVDKMLEGERDKLLRMEDELAKSVVGQGDAVQAVSRAVRRSRAGLQDPN 596
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL K+LA LFDDE +VR+DMSEYME+HSV+RLIGAPPGYVG
Sbjct: 597 RPIGSFIFLGPTGVGKTELTKSLARFLFDDETAMVRLDMSEYMEKHSVARLIGAPPGYVG 656
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRR+PY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+II
Sbjct: 657 YEEGGALTEAVRRKPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTMII 716
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L + G T QV RDQV+ V+ FRPE LNR+DEI++F L ++ +
Sbjct: 717 MTSNLGAEYLTTLPEGADTDQV-RDQVMDVVKASFRPEFLNRVDEIILFHRLQRTEMGAI 775
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QMK + LAER +A+ +T A + + + YDP+YGARP++R ++K V ++ ++
Sbjct: 776 VDIQMKRLISLLAERKIAIELTPEAREWLADKGYDPVYGARPLKRVIQKFVQDPMAEQIL 835
Query: 826 REEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAA 860
I ++S V +DA D L++RV++ +AA
Sbjct: 836 SGNIPDDSAVAVDAG--SDRLLFRVKRTMAEAEAA 868
>gi|402771387|ref|YP_006590924.1| chaperone protein ClpB [Methylocystis sp. SC2]
gi|401773407|emb|CCJ06273.1| Chaperone protein ClpB [Methylocystis sp. SC2]
Length = 873
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/859 (53%), Positives = 609/859 (70%), Gaps = 24/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + + A +AT GH QFTP H+ LL D G+ A I+ AGG +
Sbjct: 1 MNFEKYTERARGFVQSAQSMATREGHQQFTPEHILKVLLDDDQGLSAGLIDRAGGRSREA 60
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
A+ A+ KLP ++ + ++ A+ + GD+++ V++L+L L
Sbjct: 61 LAKT--EAALAKLPKVGGSGAGQLYLAPATARLFDNAEKIAQKAGDSYVTVERLLLALAM 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+DS+ + ++AGV + + +E LR +GR +SAS + + ALK Y RDL E A
Sbjct: 119 EKDSEAARILRDAGVTPQTLNAAIEDLR--KGRTADSASAENAYDALKKYARDLTEAARE 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR V++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTVQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLED 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV AEG VILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLALDMGALIAGAKYRGEFEERLKAVLNEVTAAEGNVILFIDEMHTLVGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVDEPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D A+V AA LS RYI+ R LPDKAIDL+DEA + +R+Q+DS+PEE+D
Sbjct: 357 EKYELHHGVRITDSAIVAAATLSNRYISDRFLPDKAIDLIDEASSRLRMQIDSKPEELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE AL+KE D ASK RL ++ EL DL +K L R++ EK+++ ++
Sbjct: 417 LDRRIIQLKIEQEALKKETDTASKDRLAKLEGELADLEEKSGALTARWRAEKDKLGSAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK++ E L +A+RR + RA +L YG I ++E +L+ +++ + ++ E V +
Sbjct: 477 LKEQLEAARNELAQAQRRGEYQRAGELTYGVIPDLEK---KLKETETEADTLVDEEVTAN 533
Query: 536 QIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRP 584
+A+VVSRWTG+PV ++ + E+E R++G +AV AV+ +V R+RAGL P
Sbjct: 534 DVAQVVSRWTGVPVDKMLEGEREKLLHMEDELAKRVVGQHDAVVAVSTAVRRARAGLQDP 593
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALA LFDDE +VR+DMSEYME+HSV+RLIGAPPGYV
Sbjct: 594 NRPIGSFIFLGPTGVGKTELTKALAAFLFDDETAMVRLDMSEYMEKHSVARLIGAPPGYV 653
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+I
Sbjct: 654 GYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTLI 713
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L+ G+ + V D+V+Q VR HFRPE LNR+DEI++F+ L E +
Sbjct: 714 IMTSNLGSEFLVMQKEGEDSSAV-HDEVMQVVRAHFRPEFLNRVDEIILFNRLRREDMGA 772
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+K + L +R + L + A D + A+ YDP YGARP++R ++K++ L+ L
Sbjct: 773 IVDIQVKRLQKLLEDRKITLHLDAKARDWLAAKGYDPTYGARPLKRVMQKELQDTLAERL 832
Query: 825 VREEIDENSTVYIDASPKG 843
+ EI + ++V + A G
Sbjct: 833 LAGEIIDGASVEVSADASG 851
>gi|443312779|ref|ZP_21042394.1| ATP-dependent chaperone ClpB [Synechocystis sp. PCC 7509]
gi|442777235|gb|ELR87513.1| ATP-dependent chaperone ClpB [Synechocystis sp. PCC 7509]
Length = 876
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/855 (51%), Positives = 619/855 (72%), Gaps = 24/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K+ EAIA ++ + Q HL ALL A +I G N +
Sbjct: 5 NPNQFTEKSWEAIAHTPDIVKAHSQQQIESEHLMKALLEQDG--LANSIWTKAGANIQKL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R +Q ++K P + D + +L ++ RA +K D ++++ LILG ++D
Sbjct: 63 RDRT-DQFIQKQP-KVSGSDNVYVGRSLDTLLDRADTYRKEFSDEFISIEHLILGYVKDE 120
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G L KE G+ ++K+ ++ +RG + KV S + ++AL+ YGRDL E A GKL
Sbjct: 121 RFGKSLIKEFGLDETKLKNIIKDIRGSQ--KVTDQSPEGKYEALEKYGRDLTEAAKQGKL 178
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D +L
Sbjct: 179 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLTDRKL 238
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMG+L+AGAK+RGEFEERLKAVLKEV + G +ILFIDEIH V+GAG ++G+MDA N
Sbjct: 239 ISLDMGSLIAGAKFRGEFEERLKAVLKEVTNSRGNIILFIDEIHTVVGAGASQGAMDAGN 298
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVY+ +P+V DTVSILRGLKE+Y
Sbjct: 299 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYIEQPNVEDTVSILRGLKERY 358
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 359 EVHHGVKISDSALVAAAMLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 418
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE + AS+ RL + +EL DL++ + + +++ EK+ I +I+++K+
Sbjct: 419 KVLQLEMERLSLQKETNAASRERLERIERELADLKEDQRAMSAQWQSEKDVISKIQKIKE 478
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTETVGP 534
+ + +Q+AER YDL +AA+L+YG + E++ + + E Q+ +L E V
Sbjct: 479 DSDRVNVEVQQAERDYDLNKAAELKYGKLTELQKQLKEAEAELSQAQTSGQSLLREEVTE 538
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAEV+S+WTGIP+++L ++EK++L IG EAV AVA+++ RSRAGL
Sbjct: 539 SDIAEVISKWTGIPISKLVESEKDKLLQLEDELHNRVIGQNEAVTAVADAIQRSRAGLAD 598
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKA+A LFD E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 599 PNRPTASFIFLGPTGVGKTELAKAIAAYLFDTEEALVRIDMSEYMEKHAVSRLIGAPPGY 658
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QG TVDF+N++
Sbjct: 659 VGYDEGGQLTEALRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDAQGHTVDFKNSI 718
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L +V++ +R FRPE LNR+DE ++F L +LR
Sbjct: 719 IIMTSNIGSQYILDLAGDDSQYDEMYRRVMEAMRGSFRPEFLNRIDETIIFHALQKNELR 778
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ+ +A RL++R ++L ++D+ALD + YDP++GARP++R ++K++ T++++
Sbjct: 779 QIVQLQVVRLADRLSDRKISLKLSDSALDFLAEVGYDPVFGARPLKRAIQKELETQIAKA 838
Query: 824 LVREEIDENSTVYID 838
++R E + T+++D
Sbjct: 839 ILRGEFHDGDTIFVD 853
>gi|398822258|ref|ZP_10580643.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. YR681]
gi|398227082|gb|EJN13319.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. YR681]
Length = 879
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/864 (52%), Positives = 613/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK+T ++ I A LA GH QF+ LH+ LL D G+ A I+ AGG ++
Sbjct: 1 MNIDKYTERSRGFIQSAQSLAVREGHQQFSTLHVLKVLLDDNEGLAAGLIDRAGGN--SR 58
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ + ++A+ K+P + +I + L + A+ A + GD+ + V++L+LGL
Sbjct: 59 AILKATDEALGKVPKVSGGGAGQIYLAPDLARTFDAAEKAGEKAGDSFVTVERLLLGLTL 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ S+ G + + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 EKTSEAGAILSKGGVTPQNLNAAIEALR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LD+G+L+AGAKYRGEFEERLKAVL+EV +EG ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLSLDLGSLIAGAKYRGEFEERLKAVLQEVTGSEGTFILFIDEMHTLIGAGKGDGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EY+K+VEKDAA RRFQ ++V+EPSV DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPIFVSEPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV +A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L+IE AL+KE D SK+RL + KEL DL +K L R+ EK ++ + ++
Sbjct: 417 MDREIIRLKIEQEALKKESDAGSKSRLQTLEKELADLEEKSAALTARWSAEKNKLSDAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + +A +L YG I E+E + +E + + M+ E V +
Sbjct: 477 LKAELDGLRVELANAQRRGEFQKAGELAYGRIPELEKQLADIEAKE-NSGEMMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EK++L +G AEAV AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKDKLLKMEEQLGTRVVGQAEAVRAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T V R+QV+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSEFLVNQPEGEDTSAV-REQVMGMVRGHFRPEFLNRVDEIILFHRLQRSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + LA+R + L + A D + A+ +DP YGARP++R +++ V L+ M+
Sbjct: 775 IVEIQFARLQKLLADRKIVLTLDAAGRDWLAAKGWDPAYGARPLKRVIQRYVQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ ++ + V I S +G+ L +
Sbjct: 835 LGGDVRDGDAVAI--SSEGNVLTF 856
>gi|456358085|dbj|BAM92530.1| chaperone [Agromonas oligotrophica S58]
Length = 879
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/864 (52%), Positives = 611/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK+T + I A LA GH QF+PLHL LL D G+ I+ AGG ++
Sbjct: 1 MNIDKYTERARGFIQSAQSLAVRDGHQQFSPLHLLKVLLDDGEGLAGGLIDRAGGN--SR 58
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ + A+ K+P + ++ S L + A+ A + GD+ + V++L+LGL
Sbjct: 59 AILKATEDALGKMPKVSGSGAGQVYLSPELARAFDAAEKAAEKAGDSFVTVERLLLGLTL 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
++S+ G + + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 EKNSEAGSILAKGGVTAQNLNAAIESLR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
RL++LD+GAL+AGAKYRGEFEERLKAVL+EV AEG +LFIDE+H ++GAG+ +G+MD
Sbjct: 237 KRLLSLDLGALIAGAKYRGEFEERLKAVLQEVTGAEGAFVLFIDEMHTLIGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EY+K+VEKDAA RRFQ VYV EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPVYVTEPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV +A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L+IE AL+KE D SK RL + KEL DL +K L ++ EK+++ ++
Sbjct: 417 MDREIIRLKIEQEALKKESDLGSKTRLQALEKELADLEEKSAALTAKWSAEKDKLSNAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + +A +L YG I ++E + +E + + M+ E V +
Sbjct: 477 LKSELDALRIELANAQRRGEYQKAGELAYGRIPDLEKRLADIEAKE-NAGEMMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EK++L +G EAV+AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKDKLLRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 HRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG++ L++ G+ T +V R+ V+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSDFLVNQPEGEDTSEV-RELVMGTVRSHFRPEFLNRVDEIILFHRLQKSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q ++ L ER + L++ A D + A+ +DP YGARP++R +++ V L+ M+
Sbjct: 775 IVEIQFARLSKLLEERKITLSLDADARDWLAAKGWDPAYGARPLKRVIQRSVQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ +I + V I S +G+ L +
Sbjct: 835 LAGDIKDGDKVAI--STEGNVLTF 856
>gi|336236405|ref|YP_004589021.1| ATP-dependent chaperone ClpB [Geobacillus thermoglucosidasius
C56-YS93]
gi|335363260|gb|AEH48940.1| ATP-dependent chaperone ClpB [Geobacillus thermoglucosidasius
C56-YS93]
Length = 864
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/866 (53%), Positives = 620/866 (71%), Gaps = 41/866 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSG----IFAQAINNAGGE 56
MN +KFT K EA A ++AT H Q HL +ALL G IF N G
Sbjct: 1 MNANKFTEKVQEAFLEAQKIATRHHHQQLDLEHLLLALLRQEEGLAGRIFTLLHVNIGA- 59
Query: 57 NAAQSAERVFNQAMKKLPSQTP-----APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVD 111
F ++ L + P + + S L +++ +A+ K D +++V+
Sbjct: 60 ---------FIHELEALLKKKPEVLGAGAENLYMSQRLQRLLAKAEKEAKNMQDEYISVE 110
Query: 112 QLILGLLEDSQ-IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRD 170
L+L E++ IG LF+ + + + + ++RG + +V S + + T++ALK YGRD
Sbjct: 111 HLLLAFTEETDDIGRLFQRYNINRSSLLRVLTEIRGNQ--RVTSPNPEVTYEALKKYGRD 168
Query: 171 LVEQ--AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD 228
LV + AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR D
Sbjct: 169 LVAEVKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKD 228
Query: 229 VPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAG 288
VP L D + ALDM +LVAGAK+RGEFEERLKAVL E++++EG++ILFIDE+H ++GAG
Sbjct: 229 VPEGLKDKTIFALDMSSLVAGAKFRGEFEERLKAVLNEIKKSEGRIILFIDELHTIVGAG 288
Query: 289 RTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTV 348
R EG+MDA N+ KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQQV V EPSV DT+
Sbjct: 289 RAEGAMDAGNMLKPMLARGELHCIGATTLDEYRQYIEKDPALERRFQQVLVEEPSVEDTI 348
Query: 349 SILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDS 408
SILRGL+E++E HHGV+I DRALV AA L+ RYI+ R LPDKAIDLVDEACA +R ++DS
Sbjct: 349 SILRGLRERFEVHHGVKIHDRALVAAATLADRYISDRFLPDKAIDLVDEACATIRTEMDS 408
Query: 409 QPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKE 468
P E+D + R+ MQLEIE AL KE D+ASK RL + KEL DLR+K + M++++EKE
Sbjct: 409 MPSELDEVMRRVMQLEIEEAALRKETDEASKERLAALTKELADLREKADSMKMQWQQEKE 468
Query: 469 RIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN--- 525
I +R +++ E+ L+EAE YDL RAA+LR+G I ++E + QLE S+ N
Sbjct: 469 AIQRVRDVREALEKAKRELEEAENEYDLNRAAELRHGRIPQLEKQLKQLEQEMSENNKEG 528
Query: 526 LMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKER-----------LIGLAEAVNAVAESV 574
+L E V ++IAE+VSRWTGIP+TRL + E+E+ +IG EAV VA++V
Sbjct: 529 RLLREEVTEEEIAEIVSRWTGIPLTRLVEGEREKLLRLHELLHERVIGQDEAVELVADAV 588
Query: 575 LRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVS 634
LR+RAG+ P +P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME+H+VS
Sbjct: 589 LRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAHALFDSEEQMIRIDMSEYMEKHAVS 648
Query: 635 RLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQG 694
RLIGAPPGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGR+TD QG
Sbjct: 649 RLIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHPEVFNILLQLLDDGRITDSQG 708
Query: 695 RTVDFRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIV 752
RTVDF+NTV+IMTSN+G+ LL G+ GK+ + +QVLQ++R HFRPE LNR+D+IV
Sbjct: 709 RTVDFKNTVVIMTSNIGSHLLLEGVTEDGKIKEE-THEQVLQQLRAHFRPEFLNRIDDIV 767
Query: 753 VFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWL 812
+F PL+ +++ + +++A RL++R ++L++T+ A + + +DP+YGARP+RR++
Sbjct: 768 LFKPLTMNEIKGIVAKFARELAQRLSDRHISLSLTEKAKEYIAESGFDPVYGARPLRRFM 827
Query: 813 EKKVVTELSRMLVREEIDENSTVYID 838
+K++ T L++ +V + + STV +D
Sbjct: 828 QKQIETPLAKEIVAGRVKDYSTVVVD 853
>gi|427714065|ref|YP_007062689.1| ATP-dependent chaperone ClpB [Synechococcus sp. PCC 6312]
gi|427378194|gb|AFY62146.1| ATP-dependent chaperone ClpB [Synechococcus sp. PCC 6312]
Length = 873
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/854 (50%), Positives = 615/854 (72%), Gaps = 23/854 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K +A+A +L A H Q HL ALL + A +I + G N +
Sbjct: 5 NPNQFTEKAWQALARTPDLVKQAQHQQIESEHLMAALLEEDG--LASSIFSKAGANVQRL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R ++ TPA + ++L K++ +A +K GD ++++ L+L +D+
Sbjct: 63 RDRTEEFINRQAKLSTPASS-VYLGSSLDKLLDQADNFRKQFGDEFISIEHLVLAYAQDT 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGKL 178
+ G L +E G+ ++K ++++RG + KV + + + +L+ YGRDL + + GKL
Sbjct: 122 RFGKALLQEVGLDEKKLKDTIQQIRGSQ--KVTDQNPEGKYASLEKYGRDLTLLARQGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ DVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIARDVPESLRDRQL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I LD+GAL+AGAKYRGEFEERLKAVLKEV E+ G++ILFIDEIH V+GAG T+GSMDA N
Sbjct: 240 ITLDLGALIAGAKYRGEFEERLKAVLKEVTESNGQIILFIDEIHTVVGAGATQGSMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PS+ DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSIEDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVTISDSALVAAATLSTRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +Q+E+E +L+KE AS+ RL + KEL +L++ L +++ EK+ ID+++ +K+
Sbjct: 420 KILQMEMERLSLQKEASAASRERLERLEKELANLKEDQARLNAQWQGEKQVIDQLQSIKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG----NQSDENLMLTETVGP 534
+ ++L +Q+AER YDL RAA+L+YG + E+ + + EG +Q+ +L + V
Sbjct: 480 EIDKLNIEIQQAERNYDLNRAAELKYGKMTELHKKLDETEGKLSQSQTGGQSLLRDEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++E +R++G EAV AVA+++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEMQKLLNLEAELHQRVVGQDEAVTAVADAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPY+VVLFDE+EKAH VFN LQ+LDDGR+TD QGRTVDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVFLQILDDGRVTDAQGRTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSN+G++++L R++V++ +R HFRPE LNR+DE ++F L QLR
Sbjct: 720 LIMTSNIGSQYILDVAGDDSRYGEMRERVMEAMRTHFRPEFLNRVDEFIIFHSLKKAQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ ++Q++ + RL +R ++L +T ALD + YDP+YGARP++R +++++ T++++
Sbjct: 780 EIIKIQVQRLETRLQDRKMSLNLTPEALDFLAEVGYDPVYGARPLKRAIQQQLETQIAKG 839
Query: 824 LVREEIDENSTVYI 837
++R + + T+ +
Sbjct: 840 ILRGDYHDGDTIQV 853
>gi|163843890|ref|YP_001628294.1| chaperone clpB [Brucella suis ATCC 23445]
gi|256370264|ref|YP_003107775.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Brucella
microti CCM 4915]
gi|261751016|ref|ZP_05994725.1| chaperone protein clpB [Brucella suis bv. 5 str. 513]
gi|294851107|ref|ZP_06791780.1| ATP-dependent chaperone ClpB [Brucella sp. NVSL 07-0026]
gi|163674613|gb|ABY38724.1| Chaperone clpB [Brucella suis ATCC 23445]
gi|256000427|gb|ACU48826.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Brucella
microti CCM 4915]
gi|261740769|gb|EEY28695.1| chaperone protein clpB [Brucella suis bv. 5 str. 513]
gi|294819696|gb|EFG36695.1| ATP-dependent chaperone ClpB [Brucella sp. NVSL 07-0026]
Length = 874
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/864 (52%), Positives = 604/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E+L +G EAV A++++V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 835 LGDILDGSLVKITAG--SDRLNFR 856
>gi|427732092|ref|YP_007078329.1| ATP-dependent chaperone ClpB [Nostoc sp. PCC 7524]
gi|427368011|gb|AFY50732.1| ATP-dependent chaperone ClpB [Nostoc sp. PCC 7524]
Length = 872
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/855 (51%), Positives = 617/855 (72%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA E+A Q HL ALL A I G N +
Sbjct: 5 NPNQFTEKAWEAIAHTPEIAKQHQQQQIESEHLMKALLEQEG--LASGILTKAGVNLQKI 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R Q +++ P + + + +L ++ RA+ +K D +++++ L L +D
Sbjct: 63 NDRT-EQFIQRQPKVSGSSTSVYLGRSLDTLLDRAEGYRKDFKDEYISIEHLFLAYAKDD 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E G+ ++K+ ++++RG + KV + + +Q+L+ YGRDL E A G+L
Sbjct: 122 RFGKGLFQEFGLDENKLKNIIKQVRGSQ--KVTDQNPEGKYQSLEKYGRDLTEAARKGQL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGA++AGAK+RGEFEERLKAVLKEV E+ G ++LFIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDMGAMIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVADTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D +LV AA LS+RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKISDSSLVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + KEL DL+++ + L +++ EK+ I +++ +K+
Sbjct: 420 KILQLEMEKLSLQKESDAASRERLERLEKELADLKEEQRTLNAQWQSEKDIITKLQSVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG + + +E +L Q +L E V
Sbjct: 480 EIDRVNLEIQQAERNYDLNRAAELKYGKLTDLHRRLEGTERELSQAQGTGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++ R+IG +EAV AVA+++ RSRAGL
Sbjct: 540 ADIAEIISKWTGIPISKLVESEKEKLLHLEEELHHRVIGQSEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA +FD E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFVFLGPTGVGKTELAKALAAYMFDTEEALVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QG TVDF+NT+
Sbjct: 660 VGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L R +V++ +R FRPE LNR+DEI++F L ++LR
Sbjct: 720 IIMTSNIGSQYILDVAGDDSRYDEMRHRVMEAMRNSFRPEFLNRIDEIIIFHGLDKKELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ++ + RL +R ++L +++AALD + YDP++GARP++R +++++ T++++
Sbjct: 780 QIVQLQVERLRDRLGDRKMSLRLSEAALDFLAEVGYDPVFGARPLKRAIQRELETQIAKA 839
Query: 824 LVREEIDENSTVYID 838
++R E ++ T+++D
Sbjct: 840 ILRGEFNDGDTIFVD 854
>gi|265982877|ref|ZP_06095612.1| chaperone clpB [Brucella sp. 83/13]
gi|306840202|ref|ZP_07472980.1| ATP-dependent chaperone ClpB [Brucella sp. NF 2653]
gi|264661469|gb|EEZ31730.1| chaperone clpB [Brucella sp. 83/13]
gi|306404715|gb|EFM61016.1| ATP-dependent chaperone ClpB [Brucella sp. NF 2653]
Length = 874
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/864 (52%), Positives = 604/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLERQLADAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E+L +G EAV A++++V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 835 LGDILDGSLVKITAG--SDRLNFR 856
>gi|93141242|sp|P53533.3|CLPB1_SYNE7 RecName: Full=Chaperone protein ClpB 1
Length = 874
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/868 (50%), Positives = 631/868 (72%), Gaps = 29/868 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA-- 59
NP++FT K EAI ++A A H Q HL +ALL +P G+ + AG E A
Sbjct: 5 NPNQFTEKAWEAIVRTTDVAKQAQHQQIESEHLFLALLQEP-GLALNILKKAGLEAAQLQ 63
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
Q ER + + P + + +L +++ +A +K GD ++V+ LIL
Sbjct: 64 QFTERF----IARQPKVSGGNQSVYLGRSLDQLLDQADQFRKDFGDEFISVEHLILSFPR 119
Query: 120 DSQIGDLF-KEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
DS+ G L +E V +++ ++++RG + KV + + ++AL+ YGRDL E A G
Sbjct: 120 DSRFGRLLSQEFKVDEKQLRQIIQQIRGSQ--KVTDQNPEGKYEALEKYGRDLTEMARRG 177
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D
Sbjct: 178 KLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPQSLKDR 237
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RLIALDMGAL+AGAK+RGEFEERLKAVLKEV ++EG +ILFIDEIH V+GAG +GSMDA
Sbjct: 238 RLIALDMGALIAGAKFRGEFEERLKAVLKEVTDSEGIIILFIDEIHTVVGAGAVQGSMDA 297
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KPMLARG+LRCIGATTL+EYR+Y+EKDAA ERRFQQV+V +P+V DT+SILRGLKE
Sbjct: 298 GNLLKPMLARGELRCIGATTLDEYRQYIEKDAALERRFQQVFVDQPTVEDTISILRGLKE 357
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYI+ R LPDKAIDLVDE+ A +++++ S+PEE+D +
Sbjct: 358 RYEVHHGVRISDNALVAAAVLSTRYISDRFLPDKAIDLVDESAARLKMEITSKPEELDEI 417
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK +QLE+E +L+KE D AS+ RL + KEL DL+++ + L +++ EK+ I +I+ +
Sbjct: 418 DRKILQLEMERLSLQKESDLASQERLQRLEKELADLKEEQRSLSSQWQAEKDVITDIQSV 477
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG----NQSDENLMLTETV 532
K++ +++ +Q+AER YDL +AA+L+YG + E++ + ++EG + +L E V
Sbjct: 478 KEEIDQVNLLIQQAERDYDLNKAAELKYGKLTELQRKLNEMEGGLATTHTSGKSLLREEV 537
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGL 581
IAE++S+WTGIPV++L ++E +R+IG EAV+AVA+++ RSRAGL
Sbjct: 538 TEVDIAEIISKWTGIPVSKLVESEMQKLLNLDEELHQRVIGQEEAVSAVADAIQRSRAGL 597
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P++P SF+FLGPTGVGKTELAKALA LFD E+ ++RIDMSEYME+H+VSRLIGAPP
Sbjct: 598 SDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIGAPP 657
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD +GRTVDF+N
Sbjct: 658 GYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGRTVDFKN 717
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T++I+TSN+G++++L + R +V + +R +FRPE LNR+DE ++F L +Q
Sbjct: 718 TILILTSNIGSQYILDVAGDDSRYEEMRSRVTEALRANFRPEFLNRVDETIIFHSLRKDQ 777
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L+++ R+Q+ + RL++R ++L+++ A+D ++ +DP+YGARP++R +++++ T ++
Sbjct: 778 LQQIVRIQLHRLEERLSDRKLSLSMSPEAIDFLVEIGFDPVYGARPLKRVIQRELETAIA 837
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYR 849
+ ++R + + T+ + + + + LV++
Sbjct: 838 KAILRGQFSDGDTIQV--AVENERLVFK 863
>gi|452853922|ref|YP_007495606.1| Chaperone protein ClpB [Desulfovibrio piezophilus]
gi|451897576|emb|CCH50455.1| Chaperone protein ClpB [Desulfovibrio piezophilus]
Length = 865
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/861 (53%), Positives = 616/861 (71%), Gaps = 28/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+ FT KT +AI+ A LA +GH Q HL AL++ G+ Q + G A
Sbjct: 1 MDPNTFTKKTQDAISEAQNLAIRSGHQQIDCEHLMRALVAQEQGLVPQILRKLG--IAPD 58
Query: 61 SAERVFNQAMKKLPSQT-PA--PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S + + KLP + P PD+I + L V+ A K D ++V+ ++LGL
Sbjct: 59 SYLGAVDSEISKLPKVSGPGARPDQIVVTPRLQSVLVAADDQAKRMKDEFVSVEHVLLGL 118
Query: 118 LEDSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
+++SQ IG + K+ ++ +V S + ++RGK+ +V S + + T+ +LK YGRDLVE+
Sbjct: 119 MDESQSTGIGRVNKQFNLSKDKVLSALTEVRGKQ--RVTSDNPEATYDSLKKYGRDLVEE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRRV+RILSRRTKNNPVLIGE GVGKTA+ EGLAQRIV GDVP
Sbjct: 177 ARSGKLDPVIGRDSEIRRVIRILSRRTKNNPVLIGEAGVGKTAIAEGLAQRIVAGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + +LDM AL+AGAKYRGEFEERLKAVLKEV+E+ G++++FIDE+H ++GAG+T+G
Sbjct: 237 LKDKTVFSLDMSALIAGAKYRGEFEERLKAVLKEVQESAGQIVMFIDELHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATT +EYRKY+EKD A ERRFQ V VAEPSV DT+SILR
Sbjct: 297 AMDAGNILKPMLARGELHCIGATTTDEYRKYIEKDPALERRFQTVTVAEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGVRI D A+V AA LS RYI R LPDKAIDL+DEA A +R ++DSQP E
Sbjct: 357 GLRERFEVHHGVRISDGAVVEAAILSHRYIPDRQLPDKAIDLIDEAAALIRTEIDSQPYE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D R+ MQLEIE AL++E D ASK RL+++ K+L +L++K L+ +++ EK I+
Sbjct: 417 LDKANRQIMQLEIEREALKRETDDASKGRLIKLEKDLVNLKEKQAALLTQWENEKGGIER 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLEGNQS-DENLMLTE 530
+R LK + E + E +R +D RAA+L YG + +E + + E +S D M+ E
Sbjct: 477 LRSLKGEIEATRREIDEVKRVHDYNRAAELEYGVLAGLEKDLKARNEALESGDTPRMVKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
VGPD +A+V++RWTGIPV+RL + E+E+L+ LA +AV AVA++VLR+RA
Sbjct: 537 EVGPDDVAQVIARWTGIPVSRLMEGEREKLLKLADVLHERVIGQDQAVQAVADAVLRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P GSF+FLGPTGVGKTEL K LA LFD E+ +VRIDMSEYME+H+V+RLIGA
Sbjct: 597 GLKNPSRPIGSFIFLGPTGVGKTELCKTLAASLFDSEDNIVRIDMSEYMEKHTVARLIGA 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQ+LDDGRLTD GRTVDF
Sbjct: 657 PPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHHDVFNVLLQILDDGRLTDSHGRTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NT++IMTSNLGAE +L G+ G+ VA +QV+ +R HFRPE LNR+DE V+F PL
Sbjct: 717 KNTIVIMTSNLGAELMLDGIDDQGEFKEGVA-EQVMDVLRLHFRPEFLNRVDESVLFRPL 775
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
EQL K+ L + + RL +R ++L +TD A + +YDP +GARP+ R+L+ ++
Sbjct: 776 RTEQLIKIIDLLIAGLRGRLEDRKISLTLTDKAKAFIAQSAYDPNFGARPLHRYLQTRLE 835
Query: 818 TELSRMLVREEIDENSTVYID 838
T L+++++ E+ E + V +D
Sbjct: 836 TPLAKLIIGGELLEGAEVVVD 856
>gi|303234589|ref|ZP_07321223.1| ATP-dependent chaperone protein ClpB [Finegoldia magna BVS033A4]
gi|302494252|gb|EFL54024.1| ATP-dependent chaperone protein ClpB [Finegoldia magna BVS033A4]
Length = 861
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/855 (50%), Positives = 610/855 (71%), Gaps = 24/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ +AI A A G+ + T +HL+ ALLSD I A+ I G + +
Sbjct: 1 MDLNKFTQKSVQAIQDAQNTAIKLGNPEVTDVHLSYALLSDSDSIVAKTIQKIGAD--YK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
FNQ + LP P ST +++ +A+ K+ GD+ ++V+ + + +L
Sbjct: 59 KIVSAFNQKIDSLPKNDSQSSVYP-STAFQRILLKAEDEAKSMGDSFISVEHIFMSILGE 117
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+++ L K+ V S ++ LRG +KV+S + + T L YGR+L + A G
Sbjct: 118 KNTVSAVLLKDFNVNKQNFTSNLKDLRG--NQKVDSDNPEDTTDVLTKYGRNLTDLAKEG 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIR VRILSRRTKNNPVLIG+PGVGKTA+VEGLA RIV DVP L +
Sbjct: 176 KLDPVIGRDDEIRHSVRILSRRTKNNPVLIGQPGVGKTAIVEGLALRIVNDDVPETLRNK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ ALDMG+L+AGAK+RGEFEERLKAVLKEV +++GK+I+FIDEIH ++GAG++EG+MDA
Sbjct: 236 SIFALDMGSLIAGAKFRGEFEERLKAVLKEVADSDGKIIMFIDEIHTLVGAGKSEGAMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
ANL KPMLARG++R IGATTL+EYRKY+E D A ERRFQ+V V EPSV DT+SILRG+K+
Sbjct: 296 ANLLKPMLARGEIRTIGATTLDEYRKYIETDGALERRFQKVLVEEPSVEDTISILRGIKD 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE +HG++I D A++ AA LS RYIT R LPDKAIDL+DEA A VR ++DS PE ID
Sbjct: 356 KYEIYHGIKITDNAVIAAATLSDRYITDRFLPDKAIDLMDEASAMVRTEIDSMPESIDET 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK +QLEIE AL KE D+ SK RL + KEL D +++ + M + ++K ++DEI+
Sbjct: 416 KRKILQLEIERAALNKEDDEMSKIRLENLEKELQDTKNEFDAMYMEWTQQKSKVDEIKDT 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS-DENLMLTETVGPD 535
K + E + ++EA+R+YD + ++L+YG + E+E + +L D++ ++ E+V D
Sbjct: 476 KSEIEAVKHEMEEAQRKYDFEKLSELKYGKLVELENKLEELNKKMDEDDSSIIKESVTED 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRP 584
+IAEVVS+WT IPVT+L + E++ R++G EAV AV ++++R+R+GL
Sbjct: 536 EIAEVVSKWTSIPVTKLVETERDKILNMDKLLHKRVVGQDEAVTAVTDAIIRARSGLKSL 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTELAKAL E +FDDE L+RIDMSEYME+H+VSRL+GAPPGYV
Sbjct: 596 NRPIGSFIFLGPTGVGKTELAKALTENMFDDEKNLIRIDMSEYMEKHAVSRLVGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQVLDDGRLTD +GRTVDF+NT+I
Sbjct: 656 GYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFKNTII 715
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+ L+ G+ G ++ + +R+ V+ E++ F+PE LNR+D+IV+F PL+ + +
Sbjct: 716 IMTSNIGSMDLIEGIDDHGNISDE-SRNSVMDELKSRFKPEFLNRIDDIVMFKPLTKDDI 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
K+ Q+ + +L +R + + + ++A D+++ ++YD +YGARP++R++E V T+L R
Sbjct: 775 YKIIEKQVSLLQKQLEDRQITIEIDESAEDLIIDKAYDVLYGARPVKRFIESNVETKLGR 834
Query: 823 MLVREEIDENSTVYI 837
L++ + + TV I
Sbjct: 835 ELIKGTVTDKDTVVI 849
>gi|56750469|ref|YP_171170.1| ClpB protein [Synechococcus elongatus PCC 6301]
gi|56685428|dbj|BAD78650.1| ClpB protein [Synechococcus elongatus PCC 6301]
Length = 883
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/868 (50%), Positives = 630/868 (72%), Gaps = 29/868 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA-- 59
NP++FT K EAI ++A A H Q HL +ALL P G+ + AG E A
Sbjct: 14 NPNQFTEKAWEAIVRTTDVAKQAQHQQIESEHLFLALLQGP-GLALNILKKAGLEAAQLQ 72
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
Q ER + + P + + +L +++ +A +K GD ++V+ LIL
Sbjct: 73 QFTERF----IARQPKVSGGNQSVYLGRSLDQLLDQADQFRKDFGDEFISVEHLILSFPR 128
Query: 120 DSQIGDLF-KEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
DS+ G L +E V +++ ++++RG + KV + + ++AL+ YGRDL E A G
Sbjct: 129 DSRFGRLLSQEFKVDEKQLRQIIQQIRGSQ--KVTDQNPEGKYEALEKYGRDLTEMARRG 186
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D
Sbjct: 187 KLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPQSLKDR 246
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RLIALDMGAL+AGAK+RGEFEERLKAVLKEV ++EG +ILFIDEIH V+GAG +GSMDA
Sbjct: 247 RLIALDMGALIAGAKFRGEFEERLKAVLKEVTDSEGIIILFIDEIHTVVGAGAVQGSMDA 306
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KPMLARG+LRCIGATTL+EYR+Y+EKDAA ERRFQQV+V +P+V DT+SILRGLKE
Sbjct: 307 GNLLKPMLARGELRCIGATTLDEYRQYIEKDAALERRFQQVFVDQPTVEDTISILRGLKE 366
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYI+ R LPDKAIDLVDE+ A +++++ S+PEE+D +
Sbjct: 367 RYEVHHGVRISDNALVAAAVLSTRYISDRFLPDKAIDLVDESAARLKMEITSKPEELDEI 426
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK +QLE+E +L+KE D AS+ RL + KEL DL+++ + L +++ EK+ I +I+ +
Sbjct: 427 DRKILQLEMERLSLQKESDLASQERLQRLEKELADLKEEQRSLSSQWQAEKDVITDIQSV 486
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG----NQSDENLMLTETV 532
K++ +++ +Q+AER YDL +AA+L+YG + E++ + ++EG + +L E V
Sbjct: 487 KEEIDQVNLLMQQAERDYDLNKAAELKYGKLTELQRKLNEMEGGLATTHTSGKSLLREEV 546
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGL 581
IAE++S+WTGIPV++L ++E +R+IG EAV+AVA+++ RSRAGL
Sbjct: 547 TEVDIAEIISKWTGIPVSKLVESEMQKLLNLDEELHQRVIGQEEAVSAVADAIQRSRAGL 606
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P++P SF+FLGPTGVGKTELAKALA LFD E+ ++RIDMSEYME+H+VSRLIGAPP
Sbjct: 607 SDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIGAPP 666
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD +GRTVDF+N
Sbjct: 667 GYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGRTVDFKN 726
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T++I+TSN+G++++L + R +V + +R +FRPE LNR+DE ++F L +Q
Sbjct: 727 TILILTSNIGSQYILDVAGDDSRYEEMRSRVTEALRANFRPEFLNRVDETIIFHSLRKDQ 786
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L+++ R+Q+ + RL++R ++L+++ A+D ++ +DP+YGARP++R +++++ T ++
Sbjct: 787 LQQIVRIQLHRLEERLSDRKLSLSMSPEAIDFLVEIGFDPVYGARPLKRVIQRELETAIA 846
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYR 849
+ ++R + + T+ + + + + LV++
Sbjct: 847 KAILRGQFSDGDTIQV--AVENERLVFK 872
>gi|169825209|ref|YP_001692820.1| ATP-dependent protease Clp ATP-binding subunit [Finegoldia magna
ATCC 29328]
gi|167832014|dbj|BAG08930.1| ATP-dependent protease Clp ATP-binding subunit [Finegoldia magna
ATCC 29328]
Length = 861
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/855 (50%), Positives = 610/855 (71%), Gaps = 24/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ +AI A A G+ + T +HL+ ALLSD I A+ I G + +
Sbjct: 1 MDLNKFTQKSVQAIQDAQNTAIKLGNPEVTDVHLSFALLSDSDSIVAKTIQKIGAD--YK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
FNQ + LP P ST +++ +A+ K+ GD+ ++V+ + + +L
Sbjct: 59 KIVSAFNQKIDSLPKNDSQSSVYP-STAFQRILLKAEDEAKSMGDSFISVEHIFMSILGE 117
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+++ L K+ V S ++ LRG +KV+S + + T L YGR+L + A G
Sbjct: 118 KNTVSAVLLKDFNVNKQNFTSNLKDLRG--NQKVDSDNPEDTTDVLAKYGRNLTDLAKEG 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIR VRILSRRTKNNPVLIG+PGVGKTA+VEGLA RIV DVP L +
Sbjct: 176 KLDPVIGRDDEIRHSVRILSRRTKNNPVLIGQPGVGKTAIVEGLALRIVNDDVPETLRNK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ ALDMG+L+AGAK+RGEFEERLKAVLKEV +++GK+I+FIDEIH ++GAG++EG+MDA
Sbjct: 236 SIFALDMGSLIAGAKFRGEFEERLKAVLKEVADSDGKIIMFIDEIHTLVGAGKSEGAMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
ANL KPMLARG++R IGATTL+EYRKY+E D A ERRFQ+V V EPSV DT+SILRG+K+
Sbjct: 296 ANLLKPMLARGEIRTIGATTLDEYRKYIETDGALERRFQKVLVEEPSVEDTISILRGIKD 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE +HG++I D A++ AA LS RYIT R LPDKAIDL+DEA A VR ++DS PE ID
Sbjct: 356 KYEIYHGIKITDNAVIAAATLSDRYITDRFLPDKAIDLMDEASAMVRTEIDSMPESIDET 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK +QLEIE AL KE D+ SK RL + KEL D +++ + M + ++K ++DEI+
Sbjct: 416 KRKILQLEIERAALNKEDDEMSKIRLENLEKELQDTKNEFDAMYMEWTQQKSKVDEIKDT 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS-DENLMLTETVGPD 535
K + E + ++EA+R+YD + ++L+YG + E+E + +L D++ ++ E+V D
Sbjct: 476 KSEIEAVKHEMEEAQRKYDFEKLSELKYGKLVELENKLEELNKKMDEDDSSIIKESVTED 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRP 584
+IAEVVS+WT IPVT+L + E++ R++G EAV AV ++++R+R+GL
Sbjct: 536 EIAEVVSKWTSIPVTKLVETERDKILNMDKLLHKRVVGQDEAVTAVTDAIIRARSGLKSL 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTELAKAL E +FDDE L+RIDMSEYME+H+VSRL+GAPPGYV
Sbjct: 596 NRPIGSFIFLGPTGVGKTELAKALTENMFDDEKNLIRIDMSEYMEKHAVSRLVGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQVLDDGRLTD +GRTVDF+NT+I
Sbjct: 656 GYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFKNTII 715
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+ L+ G+ G ++ + +R+ V+ E++ F+PE LNR+D+IV+F PL+ + +
Sbjct: 716 IMTSNIGSMDLIEGIDDNGNISDE-SRNSVMDELKSRFKPEFLNRIDDIVMFKPLTKDDI 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
K+ Q+ + +L +R + + + ++A D+++ ++YD +YGARP++R++E V T+L R
Sbjct: 775 YKIIEKQVSLLQKQLEDRQITIEIDESAEDLIIDKAYDVLYGARPVKRFIESNVETKLGR 834
Query: 823 MLVREEIDENSTVYI 837
L++ + + TV I
Sbjct: 835 ELIKGTVTDKDTVVI 849
>gi|374984658|ref|YP_004960153.1| ATP-dependent Clp protease [Streptomyces bingchenggensis BCW-1]
gi|297155310|gb|ADI05022.1| ATP-dependent Clp protease [Streptomyces bingchenggensis BCW-1]
Length = 874
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/861 (53%), Positives = 614/861 (71%), Gaps = 25/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T K+ EA+ A A G + HL +ALL P G+ + I+ G + A
Sbjct: 1 MDMNRLTQKSQEALQGAQTKALRLGQTEVDGEHLLLALLDQPEGLVPRLIDQVGADPTAL 60
Query: 61 SAERVFNQAMK-KLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
A K K+ AP ++ + L K++ A+ K D +++V+ L+L L +
Sbjct: 61 RTMLEAEVARKPKVTGPGAAPGQVFVTQRLAKLLDTAEQEAKRLKDEYVSVEHLMLALTD 120
Query: 120 D---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ + G + KE GV S + ++RG G++V SA+ + ++AL+ YGRDLV +A
Sbjct: 121 EGSATAAGRVLKEHGVTKEAFLSALTQVRG--GQRVTSANPEVAYEALEKYGRDLVLEAR 178
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD EIRRV +ILSR++KNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP L
Sbjct: 179 SGKLDPVIGRDAEIRRVTQILSRKSKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGLR 238
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + ALDMG+LVAGAKYRGEFEERLKAVL EV+ A G+++LF+DE+H V+GAG EG+M
Sbjct: 239 DKTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAASGRILLFVDELHTVVGAGAAEGAM 298
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L IGATTL+EYRK++EKDAA ERRFQQV V EPSV DT+S+LRGL
Sbjct: 299 DAGNMLKPMLARGELHMIGATTLQEYRKHIEKDAALERRFQQVLVDEPSVEDTISVLRGL 358
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
+E+ E HGV+IQD ALV AA LS RYI+ R LPDKAIDLVDEACA +R ++DS P E+D
Sbjct: 359 RERLEVFHGVKIQDTALVSAATLSHRYISDRFLPDKAIDLVDEACARLRTEIDSMPAELD 418
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ +LEIE AL KE D AS+ RL E+R+EL DLR + +++ E++ I ++
Sbjct: 419 EITRRVTRLEIEDAALAKETDPASEQRLAELRRELADLRAEADAKRAQWEAERQSIRRVQ 478
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLMLTE 530
L+++ EE+ +EAER YDL RAA+LRYG +QE+E + QL Q L L E
Sbjct: 479 ELRKELEEVRRDAEEAERVYDLNRAAELRYGRLQELERRLAAQEEQLAAKQGAHRL-LRE 537
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRA 579
V D+IA++VS WTGIP++RL + E +ER+IG EAV VA++++R+R+
Sbjct: 538 VVTEDEIADIVSAWTGIPISRLKEGEREKLLRLDEILRERVIGQDEAVKVVADAIIRARS 597
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAK LA LFD E+ +VR+DMSEY E+H+VSRL+GA
Sbjct: 598 GIRDPRRPIGSFIFLGPTGVGKTELAKTLAAALFDTEDNMVRLDMSEYQERHTVSRLLGA 657
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQVLDDGR+TD QGR VDF
Sbjct: 658 PPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNTLLQVLDDGRITDAQGRVVDF 717
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
RNT++IMTSN+G+ HLL G+ + ++ A+ V+ E+R HFRPE LNR+D+IV+F PL
Sbjct: 718 RNTILIMTSNIGSVHLLDGVTSEGELKPDAQGLVMSELRAHFRPEFLNRVDDIVLFKPLG 777
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
Q+ ++ LQ +++ RLAER +A+ +T AA +++ E YDP+YGARP+RR++ +V T
Sbjct: 778 EPQIERIVDLQFEELRQRLAERRIAVELTQAAREVIAHEGYDPVYGARPLRRFISHEVET 837
Query: 819 ELSRMLVREEIDENSTVYIDA 839
+ R L+R ++ E +TV +DA
Sbjct: 838 LIGRALLRGDVQEGATVRVDA 858
>gi|428773610|ref|YP_007165398.1| ATP-dependent chaperone ClpB [Cyanobacterium stanieri PCC 7202]
gi|428687889|gb|AFZ47749.1| ATP-dependent chaperone ClpB [Cyanobacterium stanieri PCC 7202]
Length = 863
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/856 (51%), Positives = 609/856 (71%), Gaps = 27/856 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENAA 59
NP +FT K AIA ++A H Q HL ALL + G+ N +AG
Sbjct: 5 NPQQFTEKAWSAIARTPDIAKENNHQQIETEHLFKALL-EQKGLAVSIFNKTDAGISRLQ 63
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ E+ N P + + L +++ +A+ +K D ++++ +IL +
Sbjct: 64 EKTEQFINSQ----PKVKNIGESVYLGRALDRLLDQAENYRKEFEDDFISIEHIILAYAK 119
Query: 120 DSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
D + G +L KE + ++K+ ++++RG + KV + + +++L+ YGRDL + A G
Sbjct: 120 DDRFGKNLLKEFNLDENKLKTIIKEIRGTQ--KVTDQNPEGKYESLQKYGRDLTQLAREG 177
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+E+RR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D
Sbjct: 178 KLDPVIGRDDEVRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLLDR 237
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
LI LDMGAL+AGAKYRGEFEERLKAVLKEV E+EG +ILFIDEIH V+GAG T+G+MDA
Sbjct: 238 TLIGLDMGALIAGAKYRGEFEERLKAVLKEVTESEGNIILFIDEIHTVVGAGATQGAMDA 297
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ V+V EP+V DTVSILRGLKE
Sbjct: 298 GNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQSVFVGEPNVIDTVSILRGLKE 357
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDE+ A +++++ S+PEE+D +
Sbjct: 358 RYEVHHGVKIADSALVAAAMLSDRYISDRFLPDKAIDLVDESAAKLKMEITSKPEELDEI 417
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK +QLE+E +L+KE+D AS R ++ +EL +L++K +++ EKE ID+IR L
Sbjct: 418 DRKILQLEMERLSLKKEEDLASVERREKLEQELANLKEKQSSFNAQWQSEKEIIDQIRTL 477
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG----NQSDENLMLTETV 532
++ E++ +Q+AER YD +AA+LRYG + +V+ + + E Q+ +L E V
Sbjct: 478 RESLEQINVEIQQAERNYDYNKAAELRYGKLADVQKEVKEKEALLSEKQTSGKSLLREEV 537
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
IAE++S+W+GIP+++L ++EKE+L +G EAV AV+E++ RSRAGL
Sbjct: 538 QEADIAEIISKWSGIPISKLVESEKEKLLHLEDQLHERVVGQEEAVTAVSEAIQRSRAGL 597
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +PT SF+FLGPTGVGKTELAKALA+ LFD E+ +VRIDMSEYME+H+VSRL+GAPP
Sbjct: 598 ADPHRPTASFIFLGPTGVGKTELAKALAQILFDTEDAIVRIDMSEYMEKHTVSRLMGAPP 657
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEA+RRRPYSVVLFDE+EKAH VFN +LQ+LDDGRLTD QGRTVDF+N
Sbjct: 658 GYVGYEEGGQLTEAIRRRPYSVVLFDEIEKAHPDVFNVMLQILDDGRLTDSQGRTVDFKN 717
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+IIMTSN+G++++L + R +V+ +R +FRPE LNR+DEI++F L Q
Sbjct: 718 TIIIMTSNIGSQYILDLAGDDAQYETMRTRVMDAMRDNFRPEFLNRIDEIIIFHSLKKSQ 777
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
LR + LQ+ + RLAE+ +AL + D ALD + YDP+YGARP++R +++ + T ++
Sbjct: 778 LRHIVNLQVNRLRERLAEQKLALDIADEALDFLADIGYDPVYGARPLKRAVQRYLETAIA 837
Query: 822 RMLVREEIDENSTVYI 837
+ +++ E + T+ +
Sbjct: 838 KAILKGEFKDGETINV 853
>gi|306842979|ref|ZP_07475613.1| ATP-dependent chaperone ClpB [Brucella sp. BO2]
gi|306286907|gb|EFM58432.1| ATP-dependent chaperone ClpB [Brucella sp. BO2]
Length = 874
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/864 (52%), Positives = 604/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGRIG-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E+L +G EAV A++++V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 835 LGDILDGSLVKISAG--SDRLNFR 856
>gi|323138800|ref|ZP_08073864.1| ATP-dependent chaperone ClpB [Methylocystis sp. ATCC 49242]
gi|322395948|gb|EFX98485.1| ATP-dependent chaperone ClpB [Methylocystis sp. ATCC 49242]
Length = 875
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/855 (53%), Positives = 605/855 (70%), Gaps = 22/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + + A LAT GH QFTP HL LL D G+ A I+ AGG N+ +
Sbjct: 1 MNFEKYTERARGFVQSAQSLATREGHQQFTPEHLLKVLLDDEQGLSAGLIDRAGG-NSRE 59
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ + A+ KLP ++ + ++ A+ + GD+++ V++L+L L
Sbjct: 60 ALAKT-EAALAKLPKVMGSGAGQLYLAPATARLFDNAEKIAQKAGDSYVTVERLLLALAL 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D++ + AGV + + +E LR +GR +SAS + + ALK Y RDL E A
Sbjct: 119 EKDAESAKILAAAGVTPQTLNAAIEDLR--KGRTADSASAENAYDALKKYARDLTEAARE 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR V++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTVQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLED 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L+ALDMGAL+AGAKYRGEFEERLKAVL E+ AEGK+ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLALDMGALIAGAKYRGEFEERLKAVLNEITAAEGKIILFIDEMHTLVGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVDEPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D A+V AA LS RYI+ R LPDKAIDLVDEA + +R+Q+DS+PEE+D
Sbjct: 357 EKYEMHHGVRITDSAIVAAATLSNRYISDRFLPDKAIDLVDEASSRLRMQIDSKPEELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE AL KE D ASK RLV++ EL DL +K L R++ EK+++ ++
Sbjct: 417 LDRRIIQLKIEQEALRKETDAASKDRLVKLESELADLEEKSSSLTARWRAEKDKLGSAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK++ E L +A+RR + RA +L YG I ++E + + E ++ + ++ E V +
Sbjct: 477 LKEQLETARNELAQAQRRGEYQRAGELTYGVIPDLEKKLAETEASEG-KGALIEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
+A+VVSRWTG+PV ++ + E+E+L +G EAV AV+ +V R+RAGL P
Sbjct: 536 DVAQVVSRWTGVPVDKMLEGEREKLLHMEDELAKRVVGQREAVEAVSTAVRRARAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALA LFDDE +VR+DMSEYME+HSV+RLIGAPPGYV
Sbjct: 596 NRPIGSFIFLGPTGVGKTELTKALASFLFDDETAMVRLDMSEYMEKHSVARLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+I
Sbjct: 656 GYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLGAE L+ G+ + V D+V+Q VR HFRPE LNR+DEI++F L E +
Sbjct: 716 IMTSNLGAEFLVMQQEGEDSTAV-HDEVMQVVRSHFRPEFLNRIDEIILFHRLRREDMGA 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q K + L +R + L A D + A+ YDP YGARP++R ++K++ L+ L
Sbjct: 775 IVDIQFKRLQKLLEDRKITLHPDSKARDWLAAKGYDPAYGARPLKRVMQKELQDALAERL 834
Query: 825 VREEIDENSTVYIDA 839
+ EI + +TV + A
Sbjct: 835 LAGEIVDGATVEVSA 849
>gi|284042115|ref|YP_003392455.1| ATP-dependent chaperone ClpB [Conexibacter woesei DSM 14684]
gi|283946336|gb|ADB49080.1| ATP-dependent chaperone ClpB [Conexibacter woesei DSM 14684]
Length = 892
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/871 (52%), Positives = 639/871 (73%), Gaps = 30/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P++ T KT EA+ A A GH + P H+ +AL++ P G+ + + A +A +
Sbjct: 1 MDPERLTQKTQEALHDAQTRALRFGHTEVAPEHMLLALIAQPDGLVPRLLLRAD-VDAGR 59
Query: 61 SAERVFNQAMKKLPSQTP--APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
AE++ + ++ P AP ++ S L +++ A+ + D +++V+ +++ L
Sbjct: 60 LAEQLEAELRRRPRVSGPGSAPGQVYVSRRLSELLDVAEQEAQRLKDDYVSVEHVLVAFL 119
Query: 119 E---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
D+ G L E+G+ R+ + ++RG + +V SA + ++AL+ YGRDLVE+A
Sbjct: 120 RAGGDTAAGRLLNESGLTTDRLLEILTEVRGAQ--RVTSAMPEGAYEALEKYGRDLVEEA 177
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
G+LDPVIGRD EIRRV++ILSR+TK+NPVL+G+PGVGKTA+VEGLAQRIVR DVP L
Sbjct: 178 RSGRLDPVIGRDGEIRRVIQILSRKTKSNPVLVGDPGVGKTAIVEGLAQRIVRQDVPEGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGR-TEG 292
D + ALDMG+LVAGAKYRGEFEERLKAVL EV+ AEG+++LFIDE+H V+GAG +EG
Sbjct: 238 KDKTVFALDMGSLVAGAKYRGEFEERLKAVLTEVKAAEGRILLFIDELHTVVGAGGGSEG 297
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYR+++E+DAA ERRFQ V + EPSV DT+SILR
Sbjct: 298 AMDAGNMLKPMLARGELHCIGATTLDEYRRHIERDAALERRFQPVVIDEPSVEDTISILR 357
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEACA VR ++DS P+E
Sbjct: 358 GLRERFEVHHGVRIQDAALVAAATLSHRYITDRFLPDKAIDLVDEACAVVRTEIDSLPQE 417
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ +LEIE AL+KE D+AS+ RL +RKEL DLR + + +++ E++ I
Sbjct: 418 LDEITRRVTRLEIEEAALQKEDDRASRDRLQTLRKELADLRAQADAMTAQWEAERQAIHR 477
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN---LMLT 529
++ L+++ EE+ ++AER YDL RAA+LR+G + ++E + E S + +L
Sbjct: 478 LQHLRRELEEVRREAEDAERGYDLNRAAELRHGKLPQLEQRLRAEEERLSTKQHGARLLR 537
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V D+IAEVV+RWTGIPV RL G+ EK ER+IG EAV VA++V+R+R
Sbjct: 538 EEVTDDEIAEVVARWTGIPVARLMEGEREKLLRLDQILHERVIGQDEAVQLVADAVIRAR 597
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P++P GSF+FLGPTGVGKTEL++ALA+ LFD E+ +VR+DMSEY E+H+VSRL+G
Sbjct: 598 AGVKDPRRPIGSFIFLGPTGVGKTELSRALAQALFDSEDNMVRLDMSEYQERHTVSRLVG 657
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGY+G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQVLDDGR+TD QGRTVD
Sbjct: 658 APPGYIGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNTLLQVLDDGRITDAQGRTVD 717
Query: 699 FRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
FRNTV+IMTSN+G+++LL G+ G ++ AR QV+ ++R HFRPE LNR+DEIV+F P
Sbjct: 718 FRNTVVIMTSNIGSQYLLDGISPDGAIS-DTARGQVMGDLRSHFRPEFLNRVDEIVLFKP 776
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L+ E++ ++ LQ++DV RLA+R + + + +AAL + E YDP+YGARP+RR+++++V
Sbjct: 777 LTLEEIEQIVELQVEDVGRRLAQRRMTVQMNEAALRFIAREGYDPVYGARPLRRFVQREV 836
Query: 817 VTELSRMLVREEIDENSTVYIDASPKGDNLV 847
T ++R L+ ++ + + + IDA GD LV
Sbjct: 837 ETRIARRLIAGDLSDGAKICIDAD--GDELV 865
>gi|410696680|gb|AFV75748.1| ATP-dependent chaperone ClpB [Thermus oshimai JL-2]
Length = 854
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/856 (53%), Positives = 609/856 (71%), Gaps = 26/856 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +++T EA+A A LA S H HL LL DP+G+ A+ + AG E AA
Sbjct: 1 MNLERWTQAAREALAQAQVLARSMKHQALDRAHLWAVLLKDPTGLPARLLAKAGVEAAAV 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E A+ +LP A + L + RA+A GD +A+D L+L L E
Sbjct: 61 RKE--AEAALARLPRVEGAEGGQYLTRELAATLDRAEALMGELGDRFVALDTLVLALAE- 117
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
S G EA +K+ +++LRG G+ V++ + T+ AL+ YG DL A GKL
Sbjct: 118 STPGLPPLEA------LKAALKELRG--GKTVQTEHAEGTYNALEQYGIDLTRMAAEGKL 169
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRV++IL RRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L R+
Sbjct: 170 DPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRI 229
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+L MG+L+AGAKYRGEFEERLKAV++EV ++G++ILFIDE+H V+GAG+ EG++DA N
Sbjct: 230 ISLQMGSLLAGAKYRGEFEERLKAVIQEVVGSQGEIILFIDELHTVVGAGKAEGAVDAGN 289
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
+ KP LARG+LR IGATTL+EYR+ +EKD A ERRFQ VYV EPSV +T+SILRGLKEKY
Sbjct: 290 MLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPSVEETISILRGLKEKY 348
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D AL+ AA LS RYIT R LPDKAIDL+DEA A +R+ L+S PEEID LER
Sbjct: 349 EVHHGVRISDSALIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALER 408
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+++QLEIE AL+KEKD ++ RL + +E+ L ++ L ++KE+E + +R +Q
Sbjct: 409 RKLQLEIEREALKKEKDPEAQTRLKAIEEEIGKLAQEIATLRAEWEKEREVLRRLREAQQ 468
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+ +E+ ++ AER+YDL RAA+LRYG + ++EA + L + E D IA
Sbjct: 469 RLDEVRRQIELAERQYDLNRAAELRYGELPKLEAEVEALSQELKGARFVRLEVTEED-IA 527
Query: 539 EVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQP 587
E+VSRWTGIPV+RL + E+E+L +G EA+ AVA+++ R+RAGL P +P
Sbjct: 528 EIVSRWTGIPVSRLLEGEREKLLRLEDELHKRVVGQDEAIRAVADAIRRARAGLKDPNRP 587
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
GSFLFLGPTGVGKTELAK LA LFD E +VRIDM+EYME+H+VSRLIGAPPGYVG+E
Sbjct: 588 IGSFLFLGPTGVGKTELAKTLAATLFDTEEAMVRIDMTEYMEKHAVSRLIGAPPGYVGYE 647
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTEAVRRRPY+V+LFDE+EKAH VFN LLQ+LDDGRLTD GRTVDFRNTVII+T
Sbjct: 648 EGGQLTEAVRRRPYTVILFDEIEKAHPDVFNLLLQILDDGRLTDSHGRTVDFRNTVIILT 707
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLG+ +L G+ + + RD+V +E+++HFRPE LNRLDEIV+F PLS EQ+R++
Sbjct: 708 SNLGSPLILEGLQQGLPYEAIRDRVFRELQRHFRPEFLNRLDEIVLFRPLSKEQIRQIVE 767
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
+Q+ ++ RL ER ++L +T+AA D + YDP++GARP++R +++ + T L+ ++
Sbjct: 768 IQLANLRARLGERRISLELTEAAKDFLAERGYDPVFGARPLKRVIQRALETPLAEKILSG 827
Query: 828 EIDENSTVYIDASPKG 843
EI + V ++A+P+G
Sbjct: 828 EIKDGDKVVVEATPQG 843
>gi|312115440|ref|YP_004013036.1| ATP-dependent chaperone ClpB [Rhodomicrobium vannielii ATCC 17100]
gi|311220569|gb|ADP71937.1| ATP-dependent chaperone ClpB [Rhodomicrobium vannielii ATCC 17100]
Length = 866
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/861 (53%), Positives = 607/861 (70%), Gaps = 25/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
MN +K T ++ A LA GH + TP HL LL D G+ A I +GG E+A
Sbjct: 1 MNFEKLTDRSKGFFQSAQSLALREGHQRLTPEHLLKVLLDDSEGLAAGLIAKSGGRPEDA 60
Query: 59 AQSAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
E QA+ K+P + +I + L +V+ +A+ + GD+ + V++L+L L
Sbjct: 61 LARVE----QALAKIPKVSGQGAGQIYIAPELARVLDQAEKIAEKSGDSFITVERLLLAL 116
Query: 118 L--EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
+D+Q + E+G + + + LR +GR +SAS + + ALK Y RDL + A
Sbjct: 117 AMEKDAQTSKILAESGATPTGLNAAINDLR--KGRTADSASAEQAYDALKRYARDLTDAA 174
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
G+LDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L
Sbjct: 175 AKGQLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESL 234
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +L+ALDMGAL+AGAKYRGEFEERLKAVL E+ A G V+LFIDE+H ++GAG+ EG+
Sbjct: 235 RDKKLLALDMGALIAGAKYRGEFEERLKAVLSEITAAAGGVVLFIDELHTLVGAGKAEGA 294
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA+NL KP LARG+L C+GATTL+EYRKY+EKDAA RRFQ V+V+EP+V DT+SILRG
Sbjct: 295 MDASNLLKPALARGELHCVGATTLDEYRKYIEKDAALARRFQPVFVSEPTVEDTISILRG 354
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKEKYE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+
Sbjct: 355 LKEKYELHHGVRITDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEEL 414
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L+R+ +QL+IE AL+KE D ASK RL ++K+L DL +K L R+K+EK+++
Sbjct: 415 DELDRRIIQLKIEREALKKESDAASKDRLARLQKDLADLEEKSDSLTRRWKEEKDKLASS 474
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVG 533
+++K++ + L++A+R+ +LARA +L YG I ++E + +E + M+ E V
Sbjct: 475 QKVKEELDTARNELEQAQRKGNLARAGELSYGVIPDLEKKLKAMETAGEGKPGMVEEAVT 534
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
PD IA VVSRWTGIPV ++ Q EK+ R+IG EAV +VA +V R+RAGL
Sbjct: 535 PDHIAGVVSRWTGIPVEKMLQGEKDKLLRMEDEVAKRVIGQEEAVRSVATAVRRARAGLQ 594
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTEL++ALA LFDDE+ +VRIDMSEYME+HSV+RLIGAPPG
Sbjct: 595 DPNRPIGSFMFLGPTGVGKTELSRALAAFLFDDESAMVRIDMSEYMEKHSVARLIGAPPG 654
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 655 YVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNT 714
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IIMTSNLG+E+L++ G+ +V R QV+ VR HFRPE LNR+D+I++F L +++
Sbjct: 715 IIIMTSNLGSEYLVNQPEGESEAEV-RAQVMAVVRSHFRPEFLNRIDDILLFHRLRRDEM 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+K + L ER + L + + A + Y+P YGARP++R +++ V LS
Sbjct: 774 GAIVDIQLKRLQKLLDERKIVLEMDEKARTWLANRGYEPAYGARPLKRVIQRAVQDPLSE 833
Query: 823 MLVREEIDENSTVYIDASPKG 843
+++ + + TV I A G
Sbjct: 834 LILAGAVKDGDTVRITAGSDG 854
>gi|22298932|ref|NP_682179.1| ClpB protein [Thermosynechococcus elongatus BP-1]
gi|54035850|sp|Q8DJ40.1|CLPB1_THEEB RecName: Full=Chaperone protein ClpB 1
gi|22295113|dbj|BAC08941.1| ClpB protein [Thermosynechococcus elongatus BP-1]
Length = 871
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/868 (51%), Positives = 627/868 (72%), Gaps = 25/868 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K AIA +LA A H HL +LL + G+ Q AG + Q
Sbjct: 5 NPNQFTEKAWAAIARTPDLAKQAQHQNLESEHLMKSLL-EQEGLATQIFQKAGC--SVQR 61
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ ++ + + P + P + +L K++ RA+ A+K GD ++++ L+L +D
Sbjct: 62 IRDLTDEFISRQP-KISHPSGVYLGQSLDKLLDRAEEARKQFGDEFISIEHLVLAFAQDD 120
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGKL 178
+ G LF++ G++ ++ ++++RG + KV + + + AL+ YGRDL + + GKL
Sbjct: 121 RFGKKLFQDIGLSEKVLREAIQQIRGSQ--KVTDQNPEGKYAALEKYGRDLTLLARQGKL 178
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV DVP +L D +L
Sbjct: 179 DPVIGRDDEIRRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVARDVPDSLRDRQL 238
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFEERLKAVLKEV ++ G++ILFIDEIH V+GAG T+G+MDA N
Sbjct: 239 IALDMGALIAGAKYRGEFEERLKAVLKEVTDSNGQIILFIDEIHTVVGAGATQGAMDAGN 298
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLKE+Y
Sbjct: 299 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERY 358
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LSARYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 359 EIHHGVKISDTALVAAATLSARYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 418
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE AS+ RL ++ +EL DL+++ L +++ EKE ID ++ +K+
Sbjct: 419 KILQLEMERLSLQKETSAASRDRLEKLERELADLKEEQSRLNAQWQAEKEVIDRLQSIKE 478
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTETVGP 534
+ E++ +Q+AER YDL RAA+L+YG + E+ + + E Q +L + V
Sbjct: 479 EIEKVNIEIQQAERNYDLNRAAELKYGKLTELHKKLAEAEAKLREIQVGGRSLLRDEVTE 538
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIPV++L ++E ++L +G EAV+AVAE++ RSRAGL
Sbjct: 539 ADIAEIISKWTGIPVSKLVESEAQKLLHLEEELHKRVVGQDEAVSAVAEAIQRSRAGLAD 598
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA +FD E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 599 PNRPIASFIFLGPTGVGKTELAKALAAFMFDTEEALVRIDMSEYMEKHAVSRLIGAPPGY 658
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPY+VVLFDE+EKAH VFN LQ+LDDGR+TD QGRTVDF+NT+
Sbjct: 659 VGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVFLQILDDGRVTDSQGRTVDFKNTI 718
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L ++V++ +R HFRPE LNR+DE ++F L +QLR
Sbjct: 719 IIMTSNIGSQYILDVAGDDSRYSEMYNRVMEAMRAHFRPEFLNRVDEFIIFHSLRKDQLR 778
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ++ + RL++R + L++T+ A+D + YDP+YGARP++R ++K++ T +++
Sbjct: 779 QIVQLQVQRLQQRLSDRHITLSLTEKAIDFLAEVGYDPVYGARPLKRAIQKQLETPIAKA 838
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRVQ 851
++R + + T+ +D + + L +R Q
Sbjct: 839 ILRGDFFDGDTILVDVG-EDERLSFRRQ 865
>gi|293375253|ref|ZP_06621536.1| ATP-dependent chaperone protein ClpB [Turicibacter sanguinis PC909]
gi|325841250|ref|ZP_08167351.1| ATP-dependent chaperone protein ClpB [Turicibacter sp. HGF1]
gi|292646114|gb|EFF64141.1| ATP-dependent chaperone protein ClpB [Turicibacter sanguinis PC909]
gi|325489931|gb|EGC92278.1| ATP-dependent chaperone protein ClpB [Turicibacter sp. HGF1]
Length = 861
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/857 (51%), Positives = 613/857 (71%), Gaps = 27/857 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K T K + + A LATS H + HL +LL D G+ ++ G Q
Sbjct: 1 MNINKMTEKLQQGLVNAQSLATSLNHQEIDTAHLLSSLLQDSEGLASRVFVKLG--YPVQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
+ Q + K PS T + E S L + + +A +A D +L+V+ ++L +LE
Sbjct: 59 EIVKDLKQILNKKPSVTGSSAEPYVSADLNRALLKADDYARAWKDDYLSVEHVLLAMLES 118
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
D ++ L K+ + ++K + ++RG +V + + + T++ L+ YGRDLVE ++G
Sbjct: 119 KDYEMKQLIKKYNLNEKQLKEVISQIRG--NSRVMTQNPEATYEVLEKYGRDLVEDVKSG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DPVIGRDEEIRR +RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP +L D
Sbjct: 177 KIDPVIGRDEEIRRAIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRQDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ LD+ ALVAGAKYRGEFEERLKAVL EV+ ++G++ILFIDEIH ++GAGRT+G+MDA
Sbjct: 237 VIFELDLAALVAGAKYRGEFEERLKAVLNEVKNSDGRIILFIDEIHTIVGAGRTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KP+LARG+L CIGATTL+EYR+Y+EKD A ERRFQ+V V EP+V DTVSILRGLK+
Sbjct: 297 GNLLKPLLARGELHCIGATTLKEYREYIEKDPALERRFQKVQVNEPTVEDTVSILRGLKD 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
++E HH V I DRA+V AA LS RYIT R LPDKAIDL+DEACA +R ++DS PEE+D +
Sbjct: 357 RFEVHHRVSISDRAIVAAATLSDRYITDRFLPDKAIDLIDEACATIRTEIDSLPEELDRI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
R+ MQLEIE AL+KE D+ SK RL ++KEL DL+D+L L ++++KEK+ I + L
Sbjct: 417 NRRVMQLEIEEAALKKETDEFSKQRLHTLQKELADLKDELNVLKLQWEKEKQAIHGVADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLTETV 532
K++ E L++A+ R + +AA+L+YG I +E I ++E Q D EN +L E V
Sbjct: 477 KKELELARRQLEDAQARGEYEKAAELQYGKIPGLEKQIAEVEAMQQDEAGKENRLLRENV 536
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGL 581
++I E++SRWTGIPV +L Q E+E+L+ L E A++ V ++++R+RAG+
Sbjct: 537 TEEEIGEIISRWTGIPVAKLVQGEREKLLNLKEDLRRRVMGQDAAIDLVGDAIIRARAGI 596
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTE+AKALAE LFD E +VRIDMSEYME+H+VSRL+GAPP
Sbjct: 597 KDPHRPIGSFLFLGPTGVGKTEIAKALAEFLFDSEEHIVRIDMSEYMEKHAVSRLVGAPP 656
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR+PYS+VL DE+EKAH VFN LLQ+LDDGR+TD QGRTVDF+N
Sbjct: 657 GYVGYEEGGQLTEAVRRKPYSIVLLDEIEKAHPDVFNILLQILDDGRITDSQGRTVDFKN 716
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+IIMTSN+G+ LL + A++QVL +R++F+PELLNR+DEI+ F+PLS
Sbjct: 717 TIIIMTSNIGSHILLENP----DFEQAQEQVLDVLREYFKPELLNRIDEIITFNPLSSSI 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++ + + RL E+ + + +TDAA + V + +D +YGARP++R++++ + T+L+
Sbjct: 773 IYQIVDKFIAQLNARLTEQRIHVVLTDAAHEYVASAGFDSVYGARPLKRFIQRTIETKLA 832
Query: 822 RMLVREEIDENSTVYID 838
R L+ +I+ ++TV +D
Sbjct: 833 RALIAGQIEMDTTVVVD 849
>gi|62290725|ref|YP_222518.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Brucella
abortus bv. 1 str. 9-941]
gi|82700638|ref|YP_415212.1| chaperonin ClpA/B [Brucella melitensis biovar Abortus 2308]
gi|189024937|ref|YP_001935705.1| ClpB, ATP-dependent Clp protease, ATP-binding subunit ClpB
[Brucella abortus S19]
gi|260545988|ref|ZP_05821728.1| ClpB protein [Brucella abortus NCTC 8038]
gi|260755549|ref|ZP_05867897.1| chaperone protein clpB [Brucella abortus bv. 6 str. 870]
gi|260758772|ref|ZP_05871120.1| chaperone protein clpB [Brucella abortus bv. 4 str. 292]
gi|260760496|ref|ZP_05872839.1| chaperone protein clpB [Brucella abortus bv. 2 str. 86/8/59]
gi|261214820|ref|ZP_05929101.1| chaperone protein clpB [Brucella abortus bv. 3 str. Tulya]
gi|376272415|ref|YP_005150993.1| chaperone protein clpB [Brucella abortus A13334]
gi|423168154|ref|ZP_17154857.1| chaperone ClpB [Brucella abortus bv. 1 str. NI435a]
gi|423169470|ref|ZP_17156145.1| chaperone ClpB [Brucella abortus bv. 1 str. NI474]
gi|423175540|ref|ZP_17162209.1| chaperone ClpB [Brucella abortus bv. 1 str. NI486]
gi|423177610|ref|ZP_17164255.1| chaperone ClpB [Brucella abortus bv. 1 str. NI488]
gi|423178903|ref|ZP_17165544.1| chaperone ClpB [Brucella abortus bv. 1 str. NI010]
gi|423182034|ref|ZP_17168671.1| chaperone ClpB [Brucella abortus bv. 1 str. NI016]
gi|423187024|ref|ZP_17173638.1| chaperone ClpB [Brucella abortus bv. 1 str. NI021]
gi|423190540|ref|ZP_17177148.1| chaperone ClpB [Brucella abortus bv. 1 str. NI259]
gi|62196857|gb|AAX75157.1| ClpB, ATP-dependent Clp protease, ATP-binding subunit ClpB
[Brucella abortus bv. 1 str. 9-941]
gi|82616739|emb|CAJ11824.1| Chaperonin clpA/B:ATP/GTP-binding site motif A (P-loop):AAA
ATPase:AAA ATPase, central region:Clp, N terminal
[Brucella melitensis biovar Abortus 2308]
gi|189020509|gb|ACD73231.1| ClpB, ATP-dependent Clp protease, ATP-binding subunit ClpB
[Brucella abortus S19]
gi|260096095|gb|EEW79971.1| ClpB protein [Brucella abortus NCTC 8038]
gi|260669090|gb|EEX56030.1| chaperone protein clpB [Brucella abortus bv. 4 str. 292]
gi|260670928|gb|EEX57749.1| chaperone protein clpB [Brucella abortus bv. 2 str. 86/8/59]
gi|260675657|gb|EEX62478.1| chaperone protein clpB [Brucella abortus bv. 6 str. 870]
gi|260916427|gb|EEX83288.1| chaperone protein clpB [Brucella abortus bv. 3 str. Tulya]
gi|363400021|gb|AEW16991.1| chaperone protein clpB [Brucella abortus A13334]
gi|374535984|gb|EHR07505.1| chaperone ClpB [Brucella abortus bv. 1 str. NI486]
gi|374539903|gb|EHR11406.1| chaperone ClpB [Brucella abortus bv. 1 str. NI435a]
gi|374543149|gb|EHR14632.1| chaperone ClpB [Brucella abortus bv. 1 str. NI474]
gi|374549198|gb|EHR20642.1| chaperone ClpB [Brucella abortus bv. 1 str. NI488]
gi|374551847|gb|EHR23276.1| chaperone ClpB [Brucella abortus bv. 1 str. NI016]
gi|374552219|gb|EHR23647.1| chaperone ClpB [Brucella abortus bv. 1 str. NI010]
gi|374554310|gb|EHR25721.1| chaperone ClpB [Brucella abortus bv. 1 str. NI259]
gi|374557736|gb|EHR29132.1| chaperone ClpB [Brucella abortus bv. 1 str. NI021]
Length = 874
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/864 (52%), Positives = 603/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+ DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTAEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E R++G EAV A++++V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 835 LGDILDGSLVKITAG--SDRLNFR 856
>gi|386398643|ref|ZP_10083421.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. WSM1253]
gi|385739269|gb|EIG59465.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. WSM1253]
Length = 879
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/864 (51%), Positives = 613/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T ++ + A LA GH QF+ LH+ LL D G+ A I+ AGG +++
Sbjct: 1 MNIEKYTERSRGFVQSAQSLAVREGHQQFSTLHVLKVLLDDNEGLAAGLIDRAGG--SSR 58
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ + A+ K+P + +I + L + A+ A + GD+ + V++L+LGL
Sbjct: 59 AILKATEDALNKVPKVSGGGAGQIYLAPELARTFDAAEKAGEKAGDSFVTVERLLLGLAL 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ S+ G + + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 EKTSEAGAILAKGGVTPQNLNAAIEALR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LD+G+L+AGAKYRGEFEERLKAVL+EV ++G +LFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLSLDLGSLIAGAKYRGEFEERLKAVLQEVTGSDGNFVLFIDEMHTLIGAGKGDGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EY+K+VEKDAA RRFQ ++V+EPSV DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPIFVSEPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRITDSALVAATTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L+IE AL+KE D SK+RL + KEL DL +K L R+ EK ++ + ++
Sbjct: 417 MDREIIRLKIEQEALKKESDAGSKSRLQTLEKELADLEEKSAALTARWSAEKNKLSDAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + +A +L YG I E+E + ++E ++ M+ E V +
Sbjct: 477 LKAELDGLRVELANAQRRGEFQKAGELAYGRIPELEKQLAEIEAKENSGE-MMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EK++L +G AEAV AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKDKLLRMEDSLGKRVVGQAEAVRAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+PTGSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPTGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T V R+QV+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSEFLVNQPEGEDTSAV-REQVMGMVRGHFRPEFLNRVDEIILFHRLQRSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L +R + L + A D + A+ +DP YGARP++R +++ V L+ M+
Sbjct: 775 IVEIQFARLQKLLTDRKIVLTLDAAGRDWLAAKGWDPAYGARPLKRVIQRHVQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ ++ + +V I S +G+ L +
Sbjct: 835 LAGDVKDGDSVAI--SSEGNVLTF 856
>gi|302380437|ref|ZP_07268905.1| ATP-dependent chaperone protein ClpB [Finegoldia magna
ACS-171-V-Col3]
gi|302311748|gb|EFK93761.1| ATP-dependent chaperone protein ClpB [Finegoldia magna
ACS-171-V-Col3]
Length = 861
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/855 (50%), Positives = 610/855 (71%), Gaps = 24/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ +AI A A G+ + T +HL+ ALLSD I A+ I G + +
Sbjct: 1 MDLNKFTQKSVQAIQDAQNTAIKLGNPEVTDVHLSFALLSDSDSIVAKTIQKIGAD--YK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
FNQ + LP P ST +++ +A+ K+ GD+ ++V+ + + +L
Sbjct: 59 KIVSAFNQKIDSLPKNDSQSSVYP-STAFQRILLKAEDEAKSMGDSFISVEHIFMSILGE 117
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+++ L K+ V S ++ LRG +KV+S + + T L YGR+L + A G
Sbjct: 118 KNTVSAVLLKDFNVNKQNFASNLKDLRG--NQKVDSDNPEDTTDVLTKYGRNLTDLAKEG 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIR VRILSRRTKNNPVLIG+PGVGKTA+VEGLA RIV DVP L +
Sbjct: 176 KLDPVIGRDDEIRHSVRILSRRTKNNPVLIGQPGVGKTAIVEGLALRIVNDDVPETLRNK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ ALDMG+L+AGAK+RGEFEERLKAVLKEV +++GK+I+FIDEIH ++GAG++EG+MDA
Sbjct: 236 SIFALDMGSLIAGAKFRGEFEERLKAVLKEVADSDGKIIMFIDEIHTLVGAGKSEGAMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
ANL KPMLARG++R IGATTL+EYRKY+E D A ERRFQ+V V EPSV DT+SILRG+K+
Sbjct: 296 ANLLKPMLARGEIRTIGATTLDEYRKYIETDGALERRFQKVLVEEPSVEDTISILRGIKD 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE +HG++I D A++ AA LS RYIT R LPDKAIDL+DEA A VR ++DS PE ID
Sbjct: 356 KYEIYHGIKITDNAVIAAATLSDRYITDRFLPDKAIDLMDEASAMVRTEIDSMPESIDET 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK +QLEIE AL KE D+ SK RL + KEL D +++ + M + ++K ++DEI+
Sbjct: 416 KRKILQLEIERAALNKEDDEMSKIRLENLEKELQDTKNEFDAMYMEWTQQKSKVDEIKDT 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS-DENLMLTETVGPD 535
K + E + ++EA+R+YD + ++L+YG + E+E + +L D++ ++ E+V D
Sbjct: 476 KSEIEAVKHEMEEAQRKYDFEKLSELKYGKLVELENKLEELNKKMDEDDSSIIKESVTED 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRP 584
+IAEVVS+WT IPVT+L + E++ R++G EAV AV ++++R+R+GL
Sbjct: 536 EIAEVVSKWTSIPVTKLVETERDKILNMDKLLHKRVVGQDEAVTAVTDAIIRARSGLKSL 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTELAKAL E +FDDE L+RIDMSEYME+H+VSRL+GAPPGYV
Sbjct: 596 NRPIGSFIFLGPTGVGKTELAKALTENMFDDEKNLIRIDMSEYMEKHAVSRLVGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQVLDDGRLTD +GRTVDF+NT+I
Sbjct: 656 GYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFKNTII 715
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+ L+ G+ G V+ + +R+ V+ E++ F+PE LNR+D+IV+F PL+ + +
Sbjct: 716 IMTSNIGSMDLIEGIDDHGNVSDE-SRNSVMDELKSRFKPEFLNRIDDIVMFKPLTKDDI 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
K+ Q+ + +L +R + + + +++ D+++ ++YD +YGARP++R++E V T+L R
Sbjct: 775 YKIIEKQVSLLQKQLEDRQITIEIDESSEDLIIDKAYDVLYGARPVKRFIESNVETKLGR 834
Query: 823 MLVREEIDENSTVYI 837
L++ + + TV I
Sbjct: 835 ELIKGTVTDKDTVVI 849
>gi|425453742|ref|ZP_18833495.1| Chaperone [Microcystis aeruginosa PCC 9807]
gi|389800393|emb|CCI20267.1| Chaperone [Microcystis aeruginosa PCC 9807]
Length = 872
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/857 (51%), Positives = 616/857 (71%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP +FT K EAI ++A Q HL ALL A ++ + + A+
Sbjct: 5 NPQQFTEKAWEAIVKTPDIAKQNSQQQIESEHLMKALLEQEG--LAGSVFSKANISLARL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + +++ P + D I +L ++ RA+ ++ GD ++++ LILG +D
Sbjct: 63 RDRT-DDFIRRQPKISNPGDSIYLGRSLDSLLDRAENYRREFGDDFISIEHLILGYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G ++F+E G+ +++K ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGKNIFQEFGLTESKLKEIIQQVRGSQ--KVTDQNPEGKYEALEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLLDRTL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LD+G L+AGAKYRGEFEERLKAVLKEV +++G +I+FIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDLGGLIAGAKYRGEFEERLKAVLKEVTDSQGNIIMFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADNALVAAALLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L++E D AS+ RL ++ KEL +L+++ L +++ EKE ID++R +K+
Sbjct: 420 KILQLEMERLSLQREYDPASRERLEKLEKELANLKEEQSGLNAQWQGEKEIIDQVRGVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL----MLTETVGP 534
E++ +Q+AER YD RAA+L++G + +++ + LE +D+ +L E V
Sbjct: 480 AIEQVNLEIQQAERDYDYNRAAELKFGKLTDLQRQMSALETQLADKQTTGKSLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+ +L ++EKE+L IG EAV AVAE++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPLNKLIESEKEKLLNLEDELHESVIGQEEAVTAVAEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E LVRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHSVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDSQGHLVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + + +V++ +R FRPE LNR+DE ++F L QLR
Sbjct: 720 IIMTSNIGSQYILDVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDETIIFHSLQKAQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ+ +++ RL E+ +AL D ALD + YDP+YGARP++R +++ V T +++
Sbjct: 780 SIVKLQIGNLSDRLMEQKLALKFADIALDYLAEIGYDPVYGARPLKRAVQRYVETPIAKA 839
Query: 824 LVREEIDENSTVYIDAS 840
++R E T+++D +
Sbjct: 840 ILRGEFKGGDTIFVDVA 856
>gi|167629429|ref|YP_001679928.1| chaperone clpb [Heliobacterium modesticaldum Ice1]
gi|167592169|gb|ABZ83917.1| chaperone clpb [Heliobacterium modesticaldum Ice1]
Length = 884
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/890 (51%), Positives = 630/890 (70%), Gaps = 32/890 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K+ EA A A LA G+ + HL AL+ G+ + ++ G ++ Q
Sbjct: 1 MDFNKLTQKSQEAFAAAQSLAVQQGNPEVDLEHLLTALVEQEEGLTGRLLDKMGI-DSDQ 59
Query: 61 SAERVFNQAMKKLPSQTPA--PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
++ + +K P P + + L +++ +A+ + D +++V+ L+L L
Sbjct: 60 FGRKIRREMERKPRISGPGVEPGRVYITPRLQRLLVKAEEEARNLKDEYVSVEHLLLAFL 119
Query: 119 E---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
+ D + +F E+ + + + +RG + +V SA+ + T++ L+ YGR+LV++A
Sbjct: 120 DPVLDGPLKRIFAESNLTRENLLKALTAIRGHQ--RVTSANPEVTYEVLEKYGRELVQEA 177
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
G+LDPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLA RIVRGDVP L
Sbjct: 178 RRGRLDPVIGRDAEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLALRIVRGDVPEGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + ALD+GALVAGAKYRGEFEERLKAVL+EV++++G+++LFIDE+H ++GAG+ EG+
Sbjct: 238 KDKAIFALDLGALVAGAKYRGEFEERLKAVLQEVKKSDGRILLFIDELHTIVGAGKAEGA 297
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA N+ KPMLARG+L CIGATTL+EYRKY+EKDAA ERRFQ V V P V DT+SILRG
Sbjct: 298 MDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDAALERRFQPVLVDAPDVEDTISILRG 357
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE++E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA +R ++DS P E+
Sbjct: 358 LKERFEVHHGVKIHDSALVAAATLSNRYISDRFLPDKAIDLVDEACALIRTEIDSLPTEL 417
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D + R+R+QLE+E AL +EKD+AS+ RL +R+EL DLR+K + R+ EKE I ++
Sbjct: 418 DEVNRRRVQLEVEEAALAREKDRASQERLEALRRELADLREKEDQMRARWDLEKEAIRKV 477
Query: 474 RRLKQKREELLFALQEAER--RYDLARAADLRYGAIQEVEAAIGQLEGN---QSDENLML 528
+ L+++ E++ ++EAER YDL R A+LRYG + ++E + Q E +S EN +L
Sbjct: 478 QSLREEIEKVRREVEEAERGYNYDLNRLAELRYGRLPQLERQLAQEEAELARKSGENRLL 537
Query: 529 TETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRS 577
E V ++IA++VSRWTGIPV RL G+ EK ER++G EAV V ++VLR+
Sbjct: 538 REEVTEEEIADIVSRWTGIPVARLVEGEREKLLRLGEILHERVVGQEEAVQLVTDAVLRA 597
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
R+G+ P++P G+F+FLGPTGVGKTELAKALA+ LFD E L+RIDMSEYME+H+VSRLI
Sbjct: 598 RSGIKDPRRPIGAFIFLGPTGVGKTELAKALAQSLFDSEENLIRIDMSEYMEKHAVSRLI 657
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGR+TD QGRTV
Sbjct: 658 GAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQILDDGRVTDSQGRTV 717
Query: 698 DFRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFD 755
DF+NTVIIMTSN+G++HLL G G++ ARDQV+ +R HFRPE LNR+D++++F
Sbjct: 718 DFKNTVIIMTSNIGSQHLLEGATEDGEIRPH-ARDQVMGSLRTHFRPEFLNRVDDVILFK 776
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PL+ ++ + + +D+ RLA+R ++L +T+AA + E +DPIYGARP++R+L++
Sbjct: 777 PLTFREITAIIDILTRDLQKRLAQRRISLTLTEAAKSHIAREGFDPIYGARPLKRYLQRH 836
Query: 816 VVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKS 865
V T ++R L+ + + + +D D + Q N G RKS
Sbjct: 837 VETPVARALIAGSVGDGGRIMVDER---DGRLQVEQANEGNTADDNNRKS 883
>gi|84043896|ref|XP_951738.1| ATP-dependent Clp protease subunit, heat shock protein 100 (HSP100)
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|33348731|gb|AAQ16055.1| ATP-dependent Clp protease subunit, heat shock protein 100
(HSP100), putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62358553|gb|AAX79014.1| ATP-dependent Clp protease subunit, heat shock protein 100
(HSP100), putative [Trypanosoma brucei]
gi|261326682|emb|CBH09644.1| ATP-dependent Clp protease subunit, heat shock protein 100
(HSP100), putative [Trypanosoma brucei gambiense DAL972]
Length = 870
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/864 (53%), Positives = 604/864 (69%), Gaps = 24/864 (2%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENAAQSA 62
+ T+ A++ A E A + P HLA+ L + G+ ++ + NAG +A
Sbjct: 7 QCTNAAQTALSDAVESARKHNNGFVDPAHLALVLFKNEDGLASRVLRKLNAGTVLEPLAA 66
Query: 63 ERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ 122
+ LP Q PAP S ++ V+ A+ + GD+ +AVD L++GL E +
Sbjct: 67 R------VGALPEQRPAPAVPSPSPAMVVVLNTAEQKRIEWGDSLIAVDHLLIGLFECKE 120
Query: 123 IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDP 180
+ + K A + V+ + +LR +G+KV S + +QAL+ Y DL + A GKLDP
Sbjct: 121 VEAIMKAAHASKKAVEGALLELR--KGKKVTSEFQEENYQALEKYATDLCKLAEEGKLDP 178
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGR +E+ R +R+LSRRTKNNP+LIGEPGVGKTA+ EG+AQRIVRGDVP L + RL +
Sbjct: 179 VIGRTDEVLRTIRVLSRRTKNNPILIGEPGVGKTAIAEGIAQRIVRGDVPDTLLNTRLFS 238
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LD+GAL+AG+ RGEFEERLK+VL EV+E+ VILFIDEIHLVLGAG++ GSMDAANL
Sbjct: 239 LDLGALIAGSSLRGEFEERLKSVLNEVKESSNGVILFIDEIHLVLGAGKSGGSMDAANLL 298
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARG+LR IGATTLEEYR YVEKDAAFERRF VYV EPSV + +SILRGLK++YE
Sbjct: 299 KPMLARGELRTIGATTLEEYRTYVEKDAAFERRFMPVYVTEPSVEECISILRGLKDRYEA 358
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HHGV+I D A+VVAAQL+ RYIT R +PDKAIDL+DEACANVRVQL S+PE ID LERK+
Sbjct: 359 HHGVQITDNAVVVAAQLANRYITNRFMPDKAIDLIDEACANVRVQLSSRPEAIDILERKK 418
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
QLEIE ALE++K+ AS+ RL V+ ++ + ++LQPL+ +Y E++RIDE++ ++ +
Sbjct: 419 RQLEIEAKALERDKEAASRERLKLVKADIQRVEEELQPLVSKYNDERQRIDELQEMQSRL 478
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL-EGNQSDENLMLTETVGPDQIAE 539
+E L+ A R + AADL+Y I ++ I L E + + ++ E V +A
Sbjct: 479 DEKKNKLERAVRDGKMDLAADLQYNVIPLIQDRIRSLKEDIERQKATLVQEKVTEGDVAA 538
Query: 540 VVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPT 588
VV+RWTGIPV +L Q ++ERL+ L+ EAV VA++++R+RAGL RP PT
Sbjct: 539 VVARWTGIPVVKLSQTDRERLLNLSMHLHRRVKGQDEAVERVADAIIRARAGLSRPNSPT 598
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
SFLFLGPTGVGKTEL KA+A +LFDDE +VRIDMSEYMEQHSVSRLIGAPPGY+GH+E
Sbjct: 599 ASFLFLGPTGVGKTELVKAVAAELFDDEKHMVRIDMSEYMEQHSVSRLIGAPPGYIGHDE 658
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTE VRRRP++VVLFDEVEKAH +V+N LLQVLDDGRLTD +GRTVDF NT+I+MTS
Sbjct: 659 GGQLTEPVRRRPHAVVLFDEVEKAHPNVYNVLLQVLDDGRLTDSRGRTVDFSNTIIVMTS 718
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
NLG+EHLL+ + +V R+ VL VR +FRPEL+NRLD+IVVF L E LR V
Sbjct: 719 NLGSEHLLNPEETNESYEVLRENVLAAVRSYFRPELINRLDDIVVFRRLRTEDLRGVVDN 778
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
+ V RL G ++ + D D +L +D GARP+RRW+EK +VTE+ RML+ +E
Sbjct: 779 LIAGVNERLKSSGFSVLLDDGVKDFILEHGHDANMGARPLRRWIEKNIVTEIGRMLIAKE 838
Query: 829 IDENSTVYIDASPKGDNLVYRVQK 852
+ NST+ + G+ L + V++
Sbjct: 839 LPPNSTLRVSLPEGGNKLTFGVKR 862
>gi|384215220|ref|YP_005606386.1| ATP-dependent protease, ATP-binding subunit [Bradyrhizobium
japonicum USDA 6]
gi|354954119|dbj|BAL06798.1| ATP-dependent protease, ATP-binding subunit [Bradyrhizobium
japonicum USDA 6]
Length = 880
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/864 (52%), Positives = 610/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK+T ++ + A LA GH QF+ LH+ LL D G+ A I+ AGG ++
Sbjct: 1 MNIDKYTERSRGFVQSAQSLAVREGHQQFSTLHVLKVLLDDNEGLAAGLIDRAGGN--SR 58
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ + A+ K+P + +I + L + A+ A + GD+ + V++L+LGL
Sbjct: 59 AILKATEDALNKVPKVSGGGAGQIYLAPELARTFDAAEKAGEKAGDSFVTVERLLLGLAL 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ S+ G + + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 EKTSEAGAILAKGGVTPQNLNAAIEALR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPETLQD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LD+GAL+AGAKYRGEFEERLKAVL+EV +EG ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLSLDLGALIAGAKYRGEFEERLKAVLQEVTASEGTFILFIDEMHTLIGAGKGDGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ ++V+EPSV DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPIFVSEPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRITDSALVAATTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ ++L+IE AL+KE D SK RL +++EL +L +K L R+ EK ++ ++
Sbjct: 417 LDREIIRLKIEQEALKKESDLGSKTRLEGLQRELSELEEKSAALTSRWSAEKNKLSNAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L +A+RR + +A +L YG I ++E + +E + + M+ E V +
Sbjct: 477 LKSELDALRVDLADAQRRGEFQKAGELAYGRIPQLEKQLADIEAREGSGD-MMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EKE+L +G AEAV AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKEKLLKMEEQLGKRVVGQAEAVRAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+PTGSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPTGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E+L++ G+ T V R+QV+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSEYLVNQPEGEDTSAV-REQVMGMVRGHFRPEFLNRVDEIILFHRLQRSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L +R + L + A D + A+ +DP YGARP++R +++ + L+ M+
Sbjct: 775 IVEIQFARLQKLLTDRKIVLTLDAAGRDWLAAKGWDPAYGARPLKRVVQRYLQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ ++ + V I S +G+ L +
Sbjct: 835 LAGDVRDGDNVAI--SSEGNVLTF 856
>gi|393218477|gb|EJD03965.1| hypothetical protein FOMMEDRAFT_106313 [Fomitiporia mediterranea
MF3/22]
Length = 895
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/865 (52%), Positives = 608/865 (70%), Gaps = 34/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSG--------IFAQAINN 52
M+ FT + +++A A +LA +AQ P+HLA LL++ SG +F+ I
Sbjct: 1 MSSFNFTDRAQQSVAAALQLAKDYANAQVYPVHLAFVLLNEGSGGAESKQHSLFSSVIQK 60
Query: 53 AGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQ 112
AGGE Q R + + +LP+Q PAP++I S+ +KV+ AQ+ QK D+++A D
Sbjct: 61 AGGE--PQLMNRALQKQIVRLPTQEPAPEDISISSAAMKVLNEAQSVQKNMHDSYIAQDH 118
Query: 113 LILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLV 172
L+L L++DS I KE + A +K+ +++ RG R+V+S + F AL+ Y DL
Sbjct: 119 LLLALIKDSTIATALKECSLTEASLKTAIQQTRGD--RRVDSKQAEEGFDALQKYAVDLT 176
Query: 173 EQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP 230
A GK+DPVIGRD EIRRV+RIL RRTKNNPVLIGEPGVGKTA+ EGLAQRIV+ DVP
Sbjct: 177 ALAEEGKIDPVIGRDNEIRRVIRILCRRTKNNPVLIGEPGVGKTAIAEGLAQRIVKRDVP 236
Query: 231 SNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEA--EGK-VILFIDEIHLVL-G 286
++L RL +LDMGAL+AGAKY+GE+EER+KAVL EVE+A EG VILFIDE+HL++ G
Sbjct: 237 ASLF-CRLFSLDMGALMAGAKYKGEYEERVKAVLNEVEKAVEEGTGVILFIDELHLIMAG 295
Query: 287 AGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPD 346
+G G MDAANLFKP+LARG+LRCIGATTL EYRKY+EKDAA ERRF QV V EPSVP+
Sbjct: 296 SGSEGGGMDAANLFKPLLARGKLRCIGATTLAEYRKYIEKDAALERRFAQVIVNEPSVPE 355
Query: 347 TVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQL 406
T+SILRG++EKYE HHGVRI D AL+ AAQL+ RY+T R LPD AIDLVDEACA+VRV
Sbjct: 356 TISILRGIREKYEVHHGVRIHDGALISAAQLAHRYLTARRLPDAAIDLVDEACASVRVTR 415
Query: 407 DSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKE 466
++ PEEID LER++++LE+E+HALE+EKD+ASK RL RK + D+ DKL PL Y+ E
Sbjct: 416 ETAPEEIDKLERRKLELEVEIHALEREKDEASKERLSVARKAIADVEDKLAPLKAAYENE 475
Query: 467 KERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL 526
K+R DEI L+++ +EL EAERRYDLA A+DLRY A+ ++ + QLE +++E+
Sbjct: 476 KKRGDEITNLRRRIDELKAKADEAERRYDLATASDLRYYALPDLTQRVAQLEAKKAEEDA 535
Query: 527 ML---TETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAE 572
T+TV +QIAE+V+RWT IPVTRL EKE+L +G EAV AVA
Sbjct: 536 AAGGGTDTVTSEQIAEIVARWTSIPVTRLLSTEKEKLLRMEKILSEEVVGQPEAVKAVAN 595
Query: 573 SVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHS 632
++ +R+GL Q+P SFLF GP+G GKT L+K LA LFD + ++RID SEY E+H+
Sbjct: 596 AIRLTRSGLANAQRPIASFLFAGPSGTGKTLLSKTLASILFDSKEAMIRIDASEYSEKHA 655
Query: 633 VSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDG 692
+SRLIGAPPGYVGH+ GGQLTE +RR+PYS+VL DE+EKA LQVLDDGRLTDG
Sbjct: 656 ISRLIGAPPGYVGHDSGGQLTEYIRRKPYSIVLIDEIEKASREFVTLFLQVLDDGRLTDG 715
Query: 693 QGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIV 752
QGR VDFRNTVIIMTSNLGA +L G V + R V+ ++ HF PE +NR+DE+V
Sbjct: 716 QGRVVDFRNTVIIMTSNLGAAYLNEMGDGPVRPET-RALVMSAIQGHFPPEFINRIDEVV 774
Query: 753 VFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWL 812
+F LS + K+ +++K+V RL++R +AL V+ A + + + Y P+YGARP+ R +
Sbjct: 775 IFRSLSRRNITKIVDIRLKEVQERLSDRKMALNVSPEAKEYLASVGYSPVYGARPLNRAV 834
Query: 813 EKKVVTELSRMLVREEIDENSTVYI 837
+ +++ LS +++ + + + +
Sbjct: 835 QSELLNPLSILILENAVRDGEMINV 859
>gi|358067780|ref|ZP_09154256.1| ATP-dependent chaperone ClpB [Johnsonella ignava ATCC 51276]
gi|356694125|gb|EHI55790.1| ATP-dependent chaperone ClpB [Johnsonella ignava ATCC 51276]
Length = 878
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/871 (52%), Positives = 617/871 (70%), Gaps = 25/871 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ + A G+ Q +HL ALL+ + I G
Sbjct: 10 MNINKFTQKSIEAVKNTEKSAYEYGNQQVEQIHLLYALLTLDDSLILNLIQKMG-----V 64
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
S E + N+ + KL + ++ S L KV+ A+ KA GD +++V+ + L +L+
Sbjct: 65 SKEMLINETLSKLTTLPKVSGGQLYISEGLNKVLISAEDEAKAMGDEYVSVEHIFLAMLK 124
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
DS + ++FK G+ R + ++RG + KV S + + T+ L YG DLVE+A
Sbjct: 125 HADSSVKEIFKSYGINRNRFLKVLSEVRGNQ--KVTSDNPEATYDTLSKYGYDLVERARE 182
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 183 QKLDPVIGRDNEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLKD 242
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
RL ALDMGAL+AGAKYRGEFEERLKAVL EV+ + G++ILF+DE+H ++GAG++EGSMD
Sbjct: 243 KRLFALDMGALLAGAKYRGEFEERLKAVLDEVKGSHGEIILFVDELHTIVGAGKSEGSMD 302
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EPSV DT+SILRGLK
Sbjct: 303 AGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVDEPSVEDTISILRGLK 362
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE +H V+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ ++DS P E+D
Sbjct: 363 ERYENYHSVKITDLALVSAAILSDRYISDRFLPDKAIDLVDEACALIKTEMDSMPAEVDE 422
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L RK MQLEIE AL+KE D S+ RL ++K+L +LRDK +++ EK+R++ +
Sbjct: 423 LRRKTMQLEIEEAALKKEDDSLSQDRLKMLQKDLAELRDKYSEQKSKWENEKKRVEGLAY 482
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
++Q+ E++ + EA+++YDL AA L+YG + E++ + + E E+L L E+V
Sbjct: 483 IRQEIEDVNKQINEAKQKYDLETAAQLQYGKLPELKKRLEEEEKKVKSEDLSLVHESVTE 542
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
++IA++VS+WT IPV++L ++EKE R+IG EAV V E++ RS+AG+
Sbjct: 543 EEIAKIVSKWTNIPVSKLNESEKEKALNLDKELHKRVIGQDEAVIKVCEAIQRSKAGIKD 602
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAK+LA QLFDDE+ +VRIDMSEYME+ SVSRLIGAPPGY
Sbjct: 603 PGKPIGSFLFLGPTGVGKTELAKSLAAQLFDDESNMVRIDMSEYMEKFSVSRLIGAPPGY 662
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSV+LFDEVEKAH VFN LLQVLDDGR+TD G+TVDF+NT+
Sbjct: 663 VGYDEGGQLTEAVRRKPYSVILFDEVEKAHPDVFNVLLQVLDDGRVTDSLGKTVDFKNTI 722
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IIMTSN+G+ +LL G+ + ++ A+ V +E++ HFRPE LNRLDEI++F PL+ + +
Sbjct: 723 IIMTSNIGSSYLLEGIDNEGNIKSEAQKAVNEELKAHFRPEFLNRLDEIILFKPLTRKDI 782
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L + ++ RL+++ + + +T A D V +YDP+YGARP++R+L+K V T+ ++
Sbjct: 783 GSIINLLIDEINKRLSDKELLIELTQKAKDFVAQRAYDPLYGARPLKRYLQKHVETKAAK 842
Query: 823 MLVREEIDENSTVYIDASPKGDNLVYRVQKN 853
+++ + T+ ID G++L ++ N
Sbjct: 843 LILSGGLHTRDTIMIDVDETGEDLKAYIKGN 873
>gi|418062922|ref|ZP_12700659.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens DSM
13060]
gi|373563519|gb|EHP89711.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens DSM
13060]
Length = 874
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/861 (53%), Positives = 600/861 (69%), Gaps = 23/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK+T + + A LA G+ Q P HL LL DP G+ A I+ AGG++
Sbjct: 1 MNFDKYTERARGFVQAAQNLAVREGNPQLAPGHLLKVLLDDPEGLCAGLIDRAGGQSRVA 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A+ Q + K P + + A+ L+++ A+ A + GD+++ V++L+L
Sbjct: 61 HAQ--VEQWLAKQPKVSGNAAQPQATRELVRLFDTAEQAAEKAGDSYVTVERLLLAFAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+D + G + AGV A + + + LR +GR ++AS + + ALK Y RDL E A G
Sbjct: 119 KDGEAGRILTAAGVTAASLNAAINALR--KGRTADNASAENAYDALKKYARDLTEAAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L +
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKEK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
L+ALDMGAL+AGAKYRGEFEERLK VL EV AEG++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 SLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGQIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+DN+
Sbjct: 357 KYEQHHGVRIQDSALVAAATLSNRYITDRFLPDKAIDLVDEAGSRLRMQVDSKPEELDNV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ ++L+IE AL+KE D AS+ RL + KEL DL ++ + R+K EK+++ L
Sbjct: 417 DREIVRLKIEGEALKKETDSASRDRLQRLEKELADLEEQSATITARWKAEKDKLGAAAEL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTETVG 533
K+K +E L A+R+ RA +L YG I +E + ++E + M+ E V
Sbjct: 477 KKKLDEARNELASAQRQGQYQRAGELAYGVIPGLEKQLSEIEAAAESAVARDGMVEEAVT 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
P IA VVSRWTG+PV ++ + E+E R++G EAV AV+ +V R+RAGL
Sbjct: 537 PAHIAGVVSRWTGVPVDKMLEGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQ 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTEL KALA LFDD+ LVRIDMSEYME+H+V+RLIGAPPG
Sbjct: 597 DPNRPIGSFMFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVARLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 657 YVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++IMTSNLG+E+L++ G+ T V RD+V+ VR HFRPE LNR+DEI++F L+ ++
Sbjct: 717 LLIMTSNLGSEYLVNQPAGQDT-DVVRDEVMGVVRGHFRPEFLNRVDEIILFHRLARSEM 775
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ +A L +R + L V A + + YDP YGARP++R ++K V L+
Sbjct: 776 GAIVDIQLGRLAKLLEDRKITLDVDGEARTWLADKGYDPAYGARPLKRVIQKNVQDPLAE 835
Query: 823 MLVREEIDENSTVYIDASPKG 843
++ I + TV + P G
Sbjct: 836 AILSGVIHDGETVPVRVGPAG 856
>gi|161619782|ref|YP_001593669.1| chaperone clpB [Brucella canis ATCC 23365]
gi|261755577|ref|ZP_05999286.1| chaperone protein clpB [Brucella suis bv. 3 str. 686]
gi|376275539|ref|YP_005115978.1| chaperone protein clpB [Brucella canis HSK A52141]
gi|161336593|gb|ABX62898.1| Chaperone clpB [Brucella canis ATCC 23365]
gi|261745330|gb|EEY33256.1| chaperone protein clpB [Brucella suis bv. 3 str. 686]
gi|363404106|gb|AEW14401.1| chaperone protein clpB [Brucella canis HSK A52141]
Length = 874
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/864 (52%), Positives = 603/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E R++G EAV A++++V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DE ++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDETILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 835 LGDILDGSLVKITAG--SDRLNFR 856
>gi|443654507|ref|ZP_21131355.1| ATP-dependent chaperone ClpB [Microcystis aeruginosa DIANCHI905]
gi|443333775|gb|ELS48316.1| ATP-dependent chaperone ClpB [Microcystis aeruginosa DIANCHI905]
Length = 872
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/857 (51%), Positives = 615/857 (71%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP +FT K EAI ++A Q HL ALL A ++ + + A+
Sbjct: 5 NPQQFTEKAWEAIVKTPDIAKQNSQQQIESEHLMKALLEQEG--LAGSVFSKANISLARL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + +++ P + D I +L ++ RA+ ++ GD ++++ LILG +D
Sbjct: 63 RDRT-DDFIRRQPKISNPGDSIYLGRSLDSLLDRAENYRREFGDDFISIEHLILGYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G ++F+E G+ ++K ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGKNIFQEFGLTENKLKEIIQQVRGSQ--KVTDQNPEGKYEALEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLLDRTL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LD+G L+AGAKYRGEFEERLKAVLKEV E++G +I+FIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDLGGLIAGAKYRGEFEERLKAVLKEVTESQGNIIMFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADNALVAAALLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L++E D AS+ RL ++ KEL +L+++ L +++ EKE ID++R +K+
Sbjct: 420 KILQLEMERLSLQREYDPASRERLEKLEKELANLKEEQSGLNAQWQGEKEIIDKVRGVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL----MLTETVGP 534
E++ +Q+AER YD RAA+L++G + +++ + LE +D+ +L E V
Sbjct: 480 AIEQVNLEIQQAERDYDYNRAAELKFGKLTDLQRQMSALETQLADKQTTGKSLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+ +L ++EKE+L IG EAV AVAE++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPLNKLIESEKEKLLNLEDELHESVIGQEEAVTAVAEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E LVRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHSVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDSQGHLVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + + +V++ +R FRPE LNR+DE ++F L QLR
Sbjct: 720 IIMTSNIGSQYILDVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDETIIFHSLQKAQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ +++ RL E+ +AL + D ALD + YDP+YGARP++R +++ V T +++
Sbjct: 780 SIVKLQTANLSDRLMEQKLALKLADIALDYLAEIGYDPVYGARPLKRAVQRYVETPIAKA 839
Query: 824 LVREEIDENSTVYIDAS 840
++R E T+++D +
Sbjct: 840 ILRGEFKGGDTIFVDVA 856
>gi|313888665|ref|ZP_07822330.1| ATP-dependent chaperone protein ClpB [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845394|gb|EFR32790.1| ATP-dependent chaperone protein ClpB [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 859
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/868 (50%), Positives = 619/868 (71%), Gaps = 26/868 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ A+ +A G+ + +H+ ALL+D G+ + +
Sbjct: 1 MNFEKFTQKSLEAVQGAYNIAKEYGNPEVKEIHINYALLNDKEGLIPRVLTYMDKNPDML 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
+ + + +++LP Q+ A E+ A ++ ++ ++A+ +K GD +L+V+ + L LL
Sbjct: 61 KGDVL--KVIERLPKQSGA--EVYADSSYRELFQKAEDFKKKMGDDYLSVEHIYLALLNM 116
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ + +F + + + ++K+RG + ++ G T+ ALK YG+DL E A G
Sbjct: 117 KGTDSSSVFNKNKIDADGFLNALKKIRGNQHVTTDNPEG--TYDALKKYGQDLTELAREG 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEE+R V+RILSRRTKNNPVLIG PGVGKTA+ GLAQRIV DVP L +
Sbjct: 175 KLDPVIGRDEEVRNVIRILSRRTKNNPVLIGPPGVGKTAIAGGLAQRIVSEDVPEGLKNK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMGAL+AGAKYRGEFEERLKAVL EV ++ G +ILFIDEIH ++GAG+T+G+MDA
Sbjct: 235 TVFSLDMGALIAGAKYRGEFEERLKAVLNEVLKSNGDIILFIDEIHNIVGAGKTDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KPMLARG+L IGATTL+EYRKY+EKD A ERRFQ+V V EPSV DT++ILRGLK+
Sbjct: 295 SNLLKPMLARGELHAIGATTLDEYRKYIEKDPALERRFQKVMVKEPSVEDTIAILRGLKD 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE +HG+RI D A++ AA LS RYIT R LPDKAIDL+DEACA +R ++DS P EID +
Sbjct: 355 KYEIYHGIRISDSAVIAAATLSDRYITDRFLPDKAIDLMDEACAMLRTEIDSMPTEIDEV 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK +QLEIE AL+KE D+AS RL +++ EL + + + L +++ EK+ +D + +
Sbjct: 415 RRKILQLEIENQALKKETDEASAERLKKLQGELSEEKAEFDRLKSKWEAEKKELDSTKDI 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K+K E+ A++EAER YDL R ++L+YG + +++ + E + DE+ M+ E V D+
Sbjct: 475 KKKIEDTNHAIEEAERNYDLERLSELKYGTLPKLKEELAAREKSTKDESSMVKEEVTEDE 534
Query: 537 IAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGRPQ 585
IA VVSRWTGIPV +L + E+++L+GL + A+ V+++VLR+RAGL
Sbjct: 535 IAYVVSRWTGIPVEKLNKTERDKLLGLEDILHKRVIGQDKAIELVSDAVLRARAGLKDKN 594
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTE AKAL E LFDDE L+RIDMSEYME+HSVSRL+G+PPGYVG
Sbjct: 595 KPIGSFIFLGPTGVGKTETAKALTETLFDDERNLIRIDMSEYMEKHSVSRLVGSPPGYVG 654
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQVLDDGRLTD QGRTVDF+NTVII
Sbjct: 655 YDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDNQGRTVDFKNTVII 714
Query: 706 MTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
MTSN+G+ L+ G+ GK+ + AR+ V+ ++R FRPE LNR+DEIV+F PL ++
Sbjct: 715 MTSNIGSHFLIDGIDEDGKIK-EDARENVMADLRASFRPEFLNRVDEIVLFKPLQKSEIY 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ + + +V RLA+R + + VTD ALD +L S+ P YGARP++R++ K+ T +S+M
Sbjct: 774 GIIKQSIAEVEKRLADRDIHIEVTDGALDFILNASFSPQYGARPVKRYISHKLETIISKM 833
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRVQ 851
++R ++ + T+ ++ + D+L +V+
Sbjct: 834 IIRGDVMDGDTIVVEV--EADDLSVKVK 859
>gi|85713565|ref|ZP_01044555.1| AAA ATPase [Nitrobacter sp. Nb-311A]
gi|85699469|gb|EAQ37336.1| AAA ATPase [Nitrobacter sp. Nb-311A]
Length = 878
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/855 (53%), Positives = 599/855 (70%), Gaps = 23/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K T + I A LA GH QFTPLH+ LL D G+ I+ AGG + +
Sbjct: 1 MNIEKHTERVRGFIQSAQSLAMREGHQQFTPLHILKVLLDDSEGLAGSLIDRAGGNS--R 58
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGL 117
+ + A+ K+P + A +I + + A+ A + GD+ + V++L+ L L
Sbjct: 59 AILKATEAALDKMPKVSGAGAGQIYLAPATARAFESAEQAAEKAGDSFVTVERLLQALSL 118
Query: 118 LEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+DS G L K+ GV + + + LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 DKDSDAGKLLKDGGVTPQTLNAAINALR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L+ALD+G+L+AGAKYRGEFEERLKAVL+EV A+G ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLALDLGSLIAGAKYRGEFEERLKAVLQEVTSADGGFILFIDEMHTLIGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ ++V+EP+V DTVSILRGLK
Sbjct: 297 ASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPIFVSEPTVEDTVSILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRIADSALVAAATLSHRYITDRFLPDKAIDLVDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ ++L+IE AL+KE D S+ARL + KEL DL + L R+ EK ++ + +
Sbjct: 417 LDREIVRLKIEQEALKKENDAGSRARLENLEKELADLEKRSADLTSRWNAEKNKLSDAAK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + ++ L A+RR + A +L YG I ++E + +E ++S N M+ ETV D
Sbjct: 477 LKSELDQARIELANAQRRGEYQIAGELAYGRIPDLEKRLESIEASES--NTMMNETVTAD 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EKE R++G EAV AVA +V R+RAGL P
Sbjct: 535 NIAQVVSRWTGVPVDKMLEGEKEKLLRMEESLAARVVGQGEAVRAVATAVRRARAGLQDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALA LFDDE +VRIDMSEYME+HSV+RLIGAPPGYV
Sbjct: 595 NRPMGSFMFLGPTGVGKTELTKALAAYLFDDETAMVRIDMSEYMEKHSVARLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 655 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 714
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T V R+QV+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 715 IMTSNLGSEFLVNQPEGEDTGAV-REQVMGMVRAHFRPEFLNRVDEIILFHRLQKSEMGR 773
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L +R + L + AA D++ +DP YGARP++R +++ V L+ M+
Sbjct: 774 IVDIQFARLQRLLDDRKIVLDLDAAARDLLAERGWDPAYGARPLKRVIQRSVQDPLAEMI 833
Query: 825 VREEIDENSTVYIDA 839
+ I + V I A
Sbjct: 834 LAGAIHDGDHVAISA 848
>gi|225026719|ref|ZP_03715911.1| hypothetical protein EUBHAL_00971 [Eubacterium hallii DSM 3353]
gi|224955980|gb|EEG37189.1| ATP-dependent chaperone protein ClpB [Eubacterium hallii DSM 3353]
Length = 863
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/855 (52%), Positives = 612/855 (71%), Gaps = 23/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ +LA G + H +LL+ + + I A
Sbjct: 1 MNINKFTQKSLEAVNNCEKLAYQYGSPEIDQEHFLYSLLTIEDSLILKLIEKMEVNKEAF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
++ QA++K P + I S +L +V+ A+ KA GD +++V+ L L L++
Sbjct: 61 LSQ--VQQAVEKKPKVSGGQTYI--SKSLNQVLVSAEDEAKAMGDEYVSVEHLFLSLMKY 116
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG-- 176
+++I LF+ G+ R + +RG +KV S + + T++ L+ YG DLVE+A
Sbjct: 117 PNTEIKKLFQAYGITRERFLQALSTVRG--NQKVVSDNPEATYETLEKYGYDLVERAKQQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVP +L D
Sbjct: 175 KLDPVIGRDSEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPDSLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L ALDMG+LVAGAKYRGEFEERLKAVL+E++ ++G+++LFIDE+H ++GAG+T+G+MDA
Sbjct: 235 KLFALDMGSLVAGAKYRGEFEERLKAVLEEIKASDGQILLFIDELHTIVGAGKTDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KPMLARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRGLK+
Sbjct: 295 GNLLKPMLARGELHCIGATTLNEYRQYIEKDAALERRFQPVMVDEPTVEDTISILRGLKD 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE +HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LDS P ++D +
Sbjct: 355 RYEVYHGVKIADSALVSAAVLSNRYITDRFLPDKAIDLVDEACAMIKTELDSLPADLDEV 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK MQLEIE AL+KE D+ S RL ++KEL +LR++ + + +EK ++ + +L
Sbjct: 415 QRKIMQLEIEEAALKKETDRLSVERLENLQKELAELREEFKSKKASWDQEKSAVERVSKL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVGPD 535
K++ E L +Q A+R YDL +AA+L+YG + E++ + + E + + E+ M+ E+V D
Sbjct: 475 KEEIESLNNEIQIAQRNYDLNKAAELQYGKLPELQRQLEEAEESAKKRESSMVHESVTDD 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA ++SRWTGIPV +L ++E+ +R++G E V V E+++RS+AG+ P
Sbjct: 535 EIATIISRWTGIPVAKLTESERNKTLNLDKELHKRVVGQDEGVEKVTEAIIRSKAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTELAKALA LFD+E +VRIDMSEYME++SVSRLIGAPPGYV
Sbjct: 595 TKPIGSFMFLGPTGVGKTELAKALAASLFDNEQNMVRIDMSEYMEKYSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDG +TD QGRTVDF+NT++
Sbjct: 655 GYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGHITDSQGRTVDFKNTIL 714
Query: 705 IMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IMTSN+G+++LL G+ ++ A V+ ++R HFRPE LNRLDEI++F PL+ + +
Sbjct: 715 IMTSNIGSQYLLEGIDENGNIKTDAETMVMNDLRSHFRPEFLNRLDEIIMFKPLTKDNIG 774
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ L + DV RL ++ +++ +TDAA V+ Y+P YGARP++R+L K V T +RM
Sbjct: 775 GIIELMLADVNKRLEDKELSIHLTDAAKSYVIEHGYEPAYGARPLKRYLTKHVDTLAARM 834
Query: 824 LVREEIDENSTVYID 838
++ E+ T+ ID
Sbjct: 835 ILSGEVYPQDTIVID 849
>gi|261217697|ref|ZP_05931978.1| chaperone clpB [Brucella ceti M13/05/1]
gi|261220922|ref|ZP_05935203.1| chaperone protein clpB [Brucella ceti B1/94]
gi|261315089|ref|ZP_05954286.1| chaperone clpB [Brucella pinnipedialis M163/99/10]
gi|261316354|ref|ZP_05955551.1| chaperone clpB [Brucella pinnipedialis B2/94]
gi|261321456|ref|ZP_05960653.1| chaperone clpB [Brucella ceti M644/93/1]
gi|261758809|ref|ZP_06002518.1| chaperone protein clpB [Brucella sp. F5/99]
gi|265987426|ref|ZP_06099983.1| chaperone protein clpB [Brucella pinnipedialis M292/94/1]
gi|265996882|ref|ZP_06109439.1| chaperone protein clpB [Brucella ceti M490/95/1]
gi|340791455|ref|YP_004756920.1| ATP-dependent chaperone ClpB [Brucella pinnipedialis B2/94]
gi|260919506|gb|EEX86159.1| chaperone protein clpB [Brucella ceti B1/94]
gi|260922786|gb|EEX89354.1| chaperone clpB [Brucella ceti M13/05/1]
gi|261294146|gb|EEX97642.1| chaperone clpB [Brucella ceti M644/93/1]
gi|261295577|gb|EEX99073.1| chaperone clpB [Brucella pinnipedialis B2/94]
gi|261304115|gb|EEY07612.1| chaperone clpB [Brucella pinnipedialis M163/99/10]
gi|261738793|gb|EEY26789.1| chaperone protein clpB [Brucella sp. F5/99]
gi|262551350|gb|EEZ07340.1| chaperone protein clpB [Brucella ceti M490/95/1]
gi|264659623|gb|EEZ29884.1| chaperone protein clpB [Brucella pinnipedialis M292/94/1]
gi|340559914|gb|AEK55152.1| ATP-dependent chaperone ClpB [Brucella pinnipedialis B2/94]
Length = 874
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/864 (52%), Positives = 603/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + A G
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERASGR--VG 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E R++G EAV A++++V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 835 LGDILDGSLVKITAG--SDRLNFR 856
>gi|297247111|ref|ZP_06930829.1| ATP-dependent chaperone ClpB [Brucella abortus bv. 5 str. B3196]
gi|297174280|gb|EFH33627.1| ATP-dependent chaperone ClpB [Brucella abortus bv. 5 str. B3196]
Length = 931
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/864 (52%), Positives = 603/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 58 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 115
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 116 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 175
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 176 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 233
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 234 KLDPVIGRDEEIRRAIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 293
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 294 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 353
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+ DT+SILRGLKE
Sbjct: 354 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTAEDTISILRGLKE 413
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 414 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 473
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 474 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 533
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 534 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 592
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E R++G EAV A++++V R+RAGL P
Sbjct: 593 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 652
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 653 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 712
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 713 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 772
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 773 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 831
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 832 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 891
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 892 LGDILDGSLVKITAG--SDRLNFR 913
>gi|261323815|ref|ZP_05963012.1| chaperone protein clpB [Brucella neotomae 5K33]
gi|261299795|gb|EEY03292.1| chaperone protein clpB [Brucella neotomae 5K33]
Length = 874
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/864 (52%), Positives = 603/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTVAGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E+L +G EAV A++++V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 835 LGDILDGSLVKITAG--SDRLNFR 856
>gi|306844838|ref|ZP_07477421.1| ATP-dependent chaperone ClpB [Brucella inopinata BO1]
gi|306274770|gb|EFM56551.1| ATP-dependent chaperone ClpB [Brucella inopinata BO1]
Length = 873
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/864 (52%), Positives = 604/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E+L +G EAV A++++V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD+V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGENDDVETVRDEVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I D L +R
Sbjct: 835 LGDILDGSLVKITVG--SDRLNFR 856
>gi|229056905|ref|ZP_04196301.1| Chaperone protein clpB 1 [Bacillus cereus AH603]
gi|228720433|gb|EEL72006.1| Chaperone protein clpB 1 [Bacillus cereus AH603]
Length = 866
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/874 (51%), Positives = 625/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGAINQLFTKFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L AL+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRALEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|404482268|ref|ZP_11017495.1| ATP-dependent chaperone ClpB [Clostridiales bacterium OBRC5-5]
gi|404344429|gb|EJZ70786.1| ATP-dependent chaperone ClpB [Clostridiales bacterium OBRC5-5]
Length = 863
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/872 (51%), Positives = 618/872 (70%), Gaps = 29/872 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG-GENAA 59
MN KFT K+ EA+ ++A + G+ Q +HL +LL + I G EN
Sbjct: 1 MNISKFTQKSIEAVQNMEKVAATHGNQQIEQIHLLASLLDIDGSLIVNLIKKMGINENEF 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
++ A++KLP + I S L V+ A+ K GD +++V+ + L LLE
Sbjct: 61 RNE---VESAIEKLPKVSGGNAYI--SNDLNNVLITAEDVAKGMGDEYVSVEHIFLNLLE 115
Query: 120 D--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ S + +F+ G+ + + ++RG + +V S + + T+ L YG DLVE+A
Sbjct: 116 NPSSNVAQIFRMYGINKNKFLQVLSEVRGNQ--RVVSDNPEATYDTLNKYGYDLVERARQ 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLA RIV GDVP+NL D
Sbjct: 174 QKLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAGRIVAGDVPNNLKD 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L ALDMGAL+AGAKYRGEFEERLKAVL EV ++EG++ILFIDE+H ++GAG+TEGSMD
Sbjct: 234 KKLFALDMGALIAGAKYRGEFEERLKAVLDEVRKSEGEIILFIDELHTIVGAGKTEGSMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EP++ DT+SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVEEPTIEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
++YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +L+S P EID
Sbjct: 354 DRYEAYHGVKITDGALVSAAVLSDRYISDRFLPDKAIDLVDEACALIKTELNSVPTEIDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L R++MQL+IE AL+KE D SK RL ++KEL ++ D+L +++ EK+ ++ + +
Sbjct: 414 LSRRQMQLQIEETALKKENDNLSKERLEALQKELAEVNDELNEAKSKWENEKKSVEGLAK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL-MLTETVGP 534
L+ + +E+ + A++ YDL RAA+L+YG + E++ + E E+L +L E+V
Sbjct: 474 LRGEIDEVNRQINAAKQSYDLNRAAELQYGKLPELQKQLQIEEEKVKKEDLRLLRESVTD 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA ++SRWT IPV++L ++E+ ER+IG EAV V ++++RSRAG+
Sbjct: 534 EEIARIISRWTNIPVSKLSESEREKTLHLGDTLHERVIGQDEAVEKVTDAIIRSRAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAK+LA+ LFDDEN ++RIDMSEYME+ SVSRLIGAPPGY
Sbjct: 594 PSKPIGSFLFLGPTGVGKTELAKSLAKSLFDDENNMIRIDMSEYMEKFSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD G+TVDF+NT+
Sbjct: 654 VGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRVTDSLGKTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
IIMTSNLG+ +LL G+ G ++ + AR +V+ E+R FRPE LNRLDEI++F PL+ +
Sbjct: 714 IIMTSNLGSAYLLDGINTYGDIS-EDARKKVMDELRNSFRPEFLNRLDEIIMFKPLTKDN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L M ++ RL + + + ++DAA + ++ YDP YGARP++R+L+K V T ++
Sbjct: 773 IGNIINLLMDELNERLESKELKVELSDAAKNYIIDNGYDPAYGARPLKRYLQKNVETMVA 832
Query: 822 RMLVRE-EIDENSTVYIDASPKGDNLVYRVQK 852
++++ + E+ +YID P + L VQK
Sbjct: 833 KLILSDSELKAKDIMYIDLDPYNE-LTAVVQK 863
>gi|168701615|ref|ZP_02733892.1| ATPase AAA-2 domain protein [Gemmata obscuriglobus UQM 2246]
Length = 871
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/867 (53%), Positives = 628/867 (72%), Gaps = 24/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++FT K +A+A A +LA H Q H ++LL G+ + AG A
Sbjct: 1 MDLNQFTEKAQQALAGAQKLAARLNHQQIDTEHALLSLLDQEKGLAPAILTKAGVSVDAV 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ + + + +LP T E + L+K+I A+A K D +++V+ L+L +D
Sbjct: 61 TVK--LQRELDRLPKVTGTNAEPRLTQRLVKLIDAAEAEAKKLKDEYVSVEHLLLAATDD 118
Query: 121 S-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ G +E G+ R+ S ++++RG + +V S + + T+Q+L+ YGRDL + A GK
Sbjct: 119 TGTAGKTLREFGLTRDRLLSALKEVRGSQ--RVTSQNPEETYQSLEKYGRDLTQYARNGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRV+++LSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 177 LDPVIGRDEEIRRVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLKDKL 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGAL+AGAKYRGEFEERLKAVLKEV ++G++ILFIDE+H ++GAG+ EG+MDA
Sbjct: 237 IVALDMGALIAGAKYRGEFEERLKAVLKEVTSSDGRIILFIDEMHTIVGAGKAEGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP+LARG+L CIGATTL+EYR++VEKDAA ERRFQ V V EPSV DT+SILRGLKE+
Sbjct: 297 NLLKPLLARGELHCIGATTLDEYRQHVEKDAALERRFQPVQVGEPSVEDTISILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI+D ALV AA LS+RYI R LPDKAIDLVDEA A +R ++DS P E+D +
Sbjct: 357 YEVHHGVRIKDGALVSAAVLSSRYIADRFLPDKAIDLVDEAAAKLRTEIDSMPTELDEIS 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ MQLEIE AL+KE D+ASK RL ++ EL +L+ L R++ EK+ + +++ ++
Sbjct: 417 RRVMQLEIEREALKKESDRASKDRLEKLEHELGNLKADADALKARWQAEKQAVQQVQAVR 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI--GQLEGNQSDENLMLTETVGPD 535
++ E++ +++AER YDL +AA+L+YG + +E + + + +N ++ E VG +
Sbjct: 477 EQIEQVKAEIEKAERAYDLNKAAELKYGKLPALEKQLAAAEAAFARDRDNKLIKEEVGEE 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
++A VVSRWTG+PV++L + EKE+L IG EAV AV E+V+R+R+GL P
Sbjct: 537 EVAAVVSRWTGVPVSKLLEGEKEKLLHLEAELHKRVIGQDEAVTAVGEAVVRARSGLKDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTELA+ALAE LFDDE ++RIDMSEY E+H+VSRL+GAPPGYV
Sbjct: 597 NRPIGSFIFLGPTGVGKTELARALAEFLFDDEKAMIRIDMSEYQEKHTVSRLVGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRRRPYSVVLFDE+EKAH VFNTLLQVLDDGRLTDGQGRTVDF+NT++
Sbjct: 657 GYDEGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNTLLQVLDDGRLTDGQGRTVDFKNTIV 716
Query: 705 IMTSNLGAEHLL---SGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
IMTSN+G++ +L +G+V ++ R V++E+RK FRPE LNR+DEI+VF L+
Sbjct: 717 IMTSNVGSQRILQYKGTHIGEVYDRM-RAAVMEELRKGFRPEFLNRIDEIIVFHALTEAD 775
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L K+ +Q+ ++ RLAER + LA+T+ A ++ YDP YGARP++R ++K+V T L+
Sbjct: 776 LTKIIEVQLGNLRKRLAERKIGLALTEGAKAHMVRVGYDPAYGARPLKRTIQKEVETPLA 835
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVY 848
R+L++ E+ + +V +D D L +
Sbjct: 836 RLLLKGEVADGGSVAVDYDAAHDALSF 862
>gi|414078516|ref|YP_006997834.1| ATP-dependent chaperone ClpB [Anabaena sp. 90]
gi|413971932|gb|AFW96021.1| ATP-dependent chaperone ClpB [Anabaena sp. 90]
Length = 872
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/855 (51%), Positives = 613/855 (71%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NPD+FT K EAIA ++A Q HL LL A AI G N +
Sbjct: 5 NPDQFTEKAWEAIAHTPDVAKQYQQQQLESEHLMKGLLEQEG--LASAIFTKAGTNLQKV 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R Q +++ P + + +L ++ RA+ ++ D ++++ L+L +D
Sbjct: 63 RDRT-EQFIQRQPKVSGTSASVYLGRSLDTLLDRAEKYRQEFKDEFISIEHLLLAYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G L +E G+ +++K+ ++++RGK+ KV + + +Q+L+ YGRDL E A G+L
Sbjct: 122 RFGKSLLQEFGLDESKLKNIIKEIRGKQ--KVTDQNPEGKYQSLEKYGRDLTEAARKGQL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR V+ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D +L
Sbjct: 180 DPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAK+RGEFEERLKAVLKEV E+ G ++LFIDEIH V+GAG ++G+MDA N
Sbjct: 240 ISLDMGALIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGASQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYLEKDAALERRFQQVYVDQPNVQDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D +LV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVRISDSSLVAAATLSNRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE D AS+ RL + KEL DL++ + L +++ EK I +I+ +K+
Sbjct: 420 KILQLEMEKLSLQKESDLASRERLERLEKELADLKEDQRTLSTQWQSEKGIITKIQSIKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+ ER YDL RAA+L+YG + ++++A +L Q +L E V
Sbjct: 480 EIDRVNLEIQQTERDYDLNRAAELKYGKLTDLHRQLQAVETELSQTQKTGKSLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+ +L ++EKE+L +G EAV AVA+++ RSRAGL
Sbjct: 540 ADIAEIISKWTGIPLNKLVESEKEKLLHLEDELHHRVVGQHEAVTAVADAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA +FD E LVRIDMSEYM++H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFVFLGPTGVGKTELAKALAAYMFDTEEALVRIDMSEYMDKHNVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QGRTVDF+N++
Sbjct: 660 VGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGRTVDFKNSI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L R++V++ +R FRPE LNRLDE+++F L +LR
Sbjct: 720 IIMTSNIGSQYILDISGDDTRYDEMRNRVMEAMRSSFRPEFLNRLDELIIFHSLQKSELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ+ + RL +R ++L ++ +ALD + YDP++GARP++R +++++ T++++
Sbjct: 780 NIVQLQVDRLKQRLIDRKISLKLSSSALDFLAEVGYDPVFGARPLKRAIQRELETQIAKA 839
Query: 824 LVREEIDENSTVYID 838
++R + + T+++D
Sbjct: 840 ILRGDFSDGDTIFVD 854
>gi|260567643|ref|ZP_05838113.1| chaperone clpB [Brucella suis bv. 4 str. 40]
gi|260157161|gb|EEW92241.1| chaperone clpB [Brucella suis bv. 4 str. 40]
Length = 874
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/864 (52%), Positives = 603/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E+L +G EAV A++++V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DE ++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDETILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 835 LGDILDGSLVKITAG--SDRLNFR 856
>gi|23502717|ref|NP_698844.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Brucella suis
1330]
gi|376281512|ref|YP_005155518.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Brucella suis
VBI22]
gi|384225504|ref|YP_005616668.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Brucella suis
1330]
gi|54035785|sp|Q7CEG6.1|CLPB_BRUSU RecName: Full=Chaperone protein ClpB
gi|13559167|emb|CAC36094.1| ClpB protein [Brucella suis]
gi|23348732|gb|AAN30759.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Brucella suis
1330]
gi|343383684|gb|AEM19176.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Brucella suis
1330]
gi|358259111|gb|AEU06846.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Brucella suis
VBI22]
Length = 874
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/864 (52%), Positives = 603/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+ +DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMHVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E+L +G EAV A++++V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 835 LGDILDGSLVKITAG--SDRLNFR 856
>gi|237816231|ref|ZP_04595224.1| ATP-dependent chaperone ClpB [Brucella abortus str. 2308 A]
gi|237788298|gb|EEP62513.1| ATP-dependent chaperone ClpB [Brucella abortus str. 2308 A]
Length = 931
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/864 (52%), Positives = 603/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 58 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 115
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 116 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 175
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 176 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 233
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 234 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 293
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 294 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 353
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+ DT+SILRGLKE
Sbjct: 354 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTAEDTISILRGLKE 413
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 414 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 473
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 474 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 533
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 534 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 592
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E R++G EAV A++++V R+RAGL P
Sbjct: 593 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 652
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 653 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 712
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 713 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 772
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 773 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 831
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 832 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 891
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 892 LGDILDGSLVKITAG--SDRLNFR 913
>gi|291557038|emb|CBL34155.1| ATP-dependent chaperone ClpB [Eubacterium siraeum V10Sc8a]
Length = 867
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/859 (51%), Positives = 610/859 (71%), Gaps = 25/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+N + T K+ EAI+ A +A S + H+ +ALL G+ Q I G + A
Sbjct: 2 LNTNNLTQKSMEAISTAQSIAVSYQNMNIEQQHILLALLQAEDGLIPQLIKKMGAD--AS 59
Query: 61 SAERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
R+ Q+ +P T + P+++ S + K A+ K D +++V+ L +GL
Sbjct: 60 QLTRLTEQSAAGIPKVTGSGRDPEKVYVSPDVDKAFTAAEEKAKQMKDEYISVEHLFIGL 119
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
LE +SQ+ D+F + G+ +E++RG +V + + T+ LK YG+DL E A
Sbjct: 120 LEKPNSQLKDIFAKCGITEKAFLQALEQVRG--SVRVTGQNPEETYDVLKKYGQDLTELA 177
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+ EGLA RIVRGDVP NL
Sbjct: 178 RQNKLDPVIGRDTEIRNVIRILSRKTKNNPVLIGEPGVGKTAIAEGLALRIVRGDVPENL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ ++ +LDMGALVAGAKYRGEFEERLKAVL+ ++++EG++ILFIDE+H ++GAG+T+G+
Sbjct: 238 KERQIFSLDMGALVAGAKYRGEFEERLKAVLQTIKKSEGQIILFIDELHTIVGAGKTDGA 297
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KP+LARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRG
Sbjct: 298 MDAGNLLKPLLARGELHCIGATTLNEYRQYIEKDAALERRFQPVMVNEPTVEDTISILRG 357
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HGV+I D AL+ AA LS RYI+ R LPDKAIDLVDEACA ++ +++S P E+
Sbjct: 358 LKERYEVFHGVKIHDSALIAAATLSDRYISDRFLPDKAIDLVDEACALIKTEMESMPSEL 417
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D++ RK MQ EIE AL+KE D+ S L EV++EL ++R K + +++ E+ I ++
Sbjct: 418 DDIRRKIMQHEIEEAALKKETDRISVEHLAEVQQELAEMRSKFNEMKAKWENERNAISKV 477
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAI--QEVEAAIGQLEGNQSDENLMLTET 531
++L+++ E +++AER YDL +AA+L+YG + + E + QS ML +
Sbjct: 478 QKLREEIESTNSLIEQAERSYDLNKAAELKYGKLPQLQKELEEEEKLAEQSKSASMLHDK 537
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IA+++ RWTGIPV++L + E+E+L IG EAV V+E++LRSRAG
Sbjct: 538 VTEEEIAKIICRWTGIPVSKLMEGEREKLLHMEDILHKRVIGQDEAVEKVSEAILRSRAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P QP GSFLFLGPTGVGKTELAKALAE LFDDE+ +VRIDMSEYME+ SVSRLIGAP
Sbjct: 598 IANPDQPIGSFLFLGPTGVGKTELAKALAEALFDDEHSMVRIDMSEYMEKFSVSRLIGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSVVL DEVEKAH VFN LLQ+LDDGR+TD QGRTVDF+
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQILDDGRITDSQGRTVDFK 717
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
NT+II+TSNLG+ ++L G+ K + + A+++V + ++ FRPE LNRLDEIV + PL
Sbjct: 718 NTIIILTSNLGSSYILDGINDKGEISEEAKNEVNKLLKTQFRPEFLNRLDEIVFYKPLRK 777
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
+++ + L + ++ RLA++ V A+TDAA D V+ +DP YGARP++R++++K+ T
Sbjct: 778 DEISGIVDLMLGELKKRLADKEVGFAITDAAKDYVINNGFDPNYGARPLKRFIQRKIETL 837
Query: 820 LSRMLVREEIDENSTVYID 838
++R L+ +++ ST+ +D
Sbjct: 838 IARKLIADDVAPGSTLTVD 856
>gi|417924820|ref|ZP_12568247.1| ATP-dependent chaperone protein ClpB [Finegoldia magna
SY403409CC001050417]
gi|341592117|gb|EGS35003.1| ATP-dependent chaperone protein ClpB [Finegoldia magna
SY403409CC001050417]
Length = 861
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/855 (50%), Positives = 610/855 (71%), Gaps = 24/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ +AI A A G+ + T +HL+ ALLSD I A+ I G + +
Sbjct: 1 MDLNKFTQKSVQAIQDAQNTAIKLGNPEVTDVHLSFALLSDSDSIVAKTIQKIGAD--YK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
FNQ + LP P ST +++ +A+ K+ GD+ ++V+ + + +L
Sbjct: 59 KIVSAFNQKIDSLPKNDSQSSVYP-STAFQRILLKAEDEAKSMGDSFISVEHIFMSILGE 117
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+++ L ++ V S ++ LRG +KV+S + + T L YGR+L + A G
Sbjct: 118 KNTVSAVLLRDFNVNKQNFASNLKDLRG--NQKVDSDNPEDTTDVLTKYGRNLTDLAKEG 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIR VRILSRRTKNNPVLIG+PGVGKTA+VEGLA RIV DVP L +
Sbjct: 176 KLDPVIGRDDEIRHSVRILSRRTKNNPVLIGQPGVGKTAIVEGLALRIVNDDVPETLRNK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ ALDMG+L+AGAK+RGEFEERLKAVLKEV +++GK+I+FIDEIH ++GAG++EG+MDA
Sbjct: 236 SIFALDMGSLIAGAKFRGEFEERLKAVLKEVADSDGKIIMFIDEIHTLVGAGKSEGAMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
ANL KPMLARG++R IGATTL+EYRKY+E D A ERRFQ+V V EPSV DT+SILRG+K+
Sbjct: 296 ANLLKPMLARGEIRTIGATTLDEYRKYIETDGALERRFQKVLVEEPSVEDTISILRGIKD 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE +HG++I D A++ AA LS RYIT R LPDKAIDL+DEA A VR ++DS PE ID
Sbjct: 356 KYEIYHGIKITDNAVIAAATLSDRYITDRFLPDKAIDLMDEASAMVRTEIDSMPESIDET 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK +QLEIE AL KE D+ SK RL + KEL D +++ + M + ++K ++DEI+
Sbjct: 416 KRKILQLEIERAALNKEDDEMSKIRLENLEKELQDTKNEFDAMYMEWTQQKSKVDEIKDT 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS-DENLMLTETVGPD 535
K + E + ++EA+R+YD + ++L+YG + E+E + +L D++ ++ E+V D
Sbjct: 476 KSEIEAVKHEMEEAQRKYDFEKLSELKYGKLVELENKLEELNKKMDEDDSSIIKESVTED 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRP 584
+IAEVVS+WT IPVT+L + E++ R++G EAV AV ++++R+R+GL
Sbjct: 536 EIAEVVSKWTSIPVTKLVETERDKILNMDKLLHKRVVGQDEAVTAVTDAIIRARSGLKSL 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTELAKAL E +FDDE L+RIDMSEYME+H+VSRL+GAPPGYV
Sbjct: 596 NRPIGSFIFLGPTGVGKTELAKALTENMFDDEKNLIRIDMSEYMEKHAVSRLVGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQVLDDGRLTD +GRTVDF+NT+I
Sbjct: 656 GYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFKNTII 715
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+ L+ G+ G ++ + +R+ V+ E++ F+PE LNR+D+IV+F PL+ + +
Sbjct: 716 IMTSNIGSMDLIEGIDDHGNISDE-SRNSVMDELKSRFKPEFLNRIDDIVMFKPLTKDDI 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
K+ Q+ + +L +R + + + ++A D+++ ++YD +YGARP++R++E V T+L R
Sbjct: 775 YKIIEKQVSLLQKQLEDRQITIEIDESAEDLIIDKAYDVLYGARPVKRFIESNVETKLGR 834
Query: 823 MLVREEIDENSTVYI 837
L++ + + TV I
Sbjct: 835 ELIKGTVTDKDTVVI 849
>gi|225628069|ref|ZP_03786104.1| ATP-dependent chaperone ClpB [Brucella ceti str. Cudo]
gi|225616894|gb|EEH13941.1| ATP-dependent chaperone ClpB [Brucella ceti str. Cudo]
Length = 931
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/864 (52%), Positives = 603/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + A G
Sbjct: 58 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERASGR--VG 115
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 116 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 175
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 176 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 233
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 234 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 293
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 294 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 353
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 354 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 413
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 414 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 473
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 474 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 533
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 534 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 592
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E R++G EAV A++++V R+RAGL P
Sbjct: 593 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 652
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 653 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 712
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 713 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 772
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 773 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 831
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 832 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 891
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 892 LGDILDGSLVKITAG--SDRLNFR 913
>gi|425445231|ref|ZP_18825264.1| Chaperone [Microcystis aeruginosa PCC 9443]
gi|389734825|emb|CCI01576.1| Chaperone [Microcystis aeruginosa PCC 9443]
Length = 872
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/857 (51%), Positives = 616/857 (71%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP +FT K EAI ++A Q HL LL A ++ + + A+
Sbjct: 5 NPQQFTEKAWEAIVKTPDIAKQNSQQQIESEHLMKVLLEQEG--LAGSVFSKANISLARL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + +++ P + D I +L ++ RA+ ++ GD ++++ LILG +D
Sbjct: 63 RDRT-DDFIRRQPKISNPGDSIYLGRSLDSLLDRAENYRREFGDDFISIEHLILGYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G ++F+E G+ +++K ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGKNIFQEFGLTESKLKEIIQQVRGSQ--KVTDQNPEGKYEALEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLLDRTL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LD+G L+AGAKYRGEFEERLKAVLKEV +++G +I+FIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDLGGLIAGAKYRGEFEERLKAVLKEVTDSQGNIIMFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADNALVAAALLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L++E D AS+ RL ++ KEL +L+++ L +++ EKE ID++R +K+
Sbjct: 420 KILQLEMERLSLQREYDPASRERLEKLEKELANLKEEQSGLNAQWQGEKEIIDKVRGVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL----MLTETVGP 534
E++ +Q+AER YD RAA+L++G + +++ + LE +D+ +L E V
Sbjct: 480 AIEQVNLEIQQAERDYDYNRAAELKFGKLTDLQRQMSALETQLADKQTTGKSLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+ +L ++EKE+L IG EAV AVAE++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPLNKLIESEKEKLLNLEDELHESVIGQEEAVTAVAEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E LVRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHSVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDSQGHLVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + + +V++ +R FRPE LNR+DE ++F L QLR
Sbjct: 720 IIMTSNIGSQYILDVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDETIIFHSLQKAQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ+ +++ RL E+ +AL + D ALD + YDP+YGARP++R +++ V T +++
Sbjct: 780 SIVKLQLANLSDRLMEQKLALKLADIALDYLAEIGYDPVYGARPLKRAVQRYVETPIAKA 839
Query: 824 LVREEIDENSTVYIDAS 840
++R E T+++D +
Sbjct: 840 ILRGEFKGGDTIFVDVA 856
>gi|434388156|ref|YP_007098767.1| ATP-dependent chaperone ClpB [Chamaesiphon minutus PCC 6605]
gi|428019146|gb|AFY95240.1| ATP-dependent chaperone ClpB [Chamaesiphon minutus PCC 6605]
Length = 873
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/859 (51%), Positives = 619/859 (72%), Gaps = 32/859 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP +FT K +A+ ++A ++ H Q HL ALL A +I + G N +Q
Sbjct: 5 NPQQFTEKAWQAVTNTLDIAKASHHQQMESEHLLKALLEQDG--LATSILSKAGVNLSQ- 61
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIR----RAQAAQKAHGDTHLAVDQLILGL 117
F Q+++ + P S L + I RA+ +K +GD ++++ L+L
Sbjct: 62 ----FRQSLESFIQKQPRISGEVTSVYLGRSIDTLLDRAEKYRKEYGDEFISIEHLLLAY 117
Query: 118 LEDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+D + G F + + +++K+ V ++RG + KV + + +++L YGRDL + A
Sbjct: 118 PQDDRFGKQFFADFKLEESKLKTIVSQIRGSQ--KVMDQNPENKYESLSKYGRDLTDFAR 175
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L
Sbjct: 176 RGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIISGDVPQSLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +LI+LDMGALVAGAKYRGEFEERLKAVLKEV E++G++ILFIDEIH V+GAG T+G+M
Sbjct: 236 DRQLISLDMGALVAGAKYRGEFEERLKAVLKEVTESQGQIILFIDEIHTVVGAGATQGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPM+ARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGL
Sbjct: 296 DAGNLLKPMMARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGV+I D ALV AA LS RYI+ R LPDKAIDL+DEA A +++++ S+PEE+D
Sbjct: 356 KERYEVHHGVKISDNALVAAATLSTRYISDRFLPDKAIDLMDEAAARLKMEITSKPEELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
++RK +QLE+E ++ K+ ++ RL ++ KEL DL+++ + L +++ EK+ I +I+
Sbjct: 416 EIDRKVLQLEMERLSVNKDTSNTARERLQKIEKELGDLKEEQRALTAQWQSEKDVITDIQ 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTE 530
+K++ + + +Q+AER YDLA+A+ L++G E +EAA +L +Q+ +L E
Sbjct: 476 TIKEEIDRVNIEIQQAERNYDLAQASALKFGKSIELQGKLEAAEVKLSQSQTTGKSLLRE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V IAE++S+WTGIP+T+L + E+E+L IG EAV AVAE++ RSRA
Sbjct: 536 EVTEADIAEIISKWTGIPLTKLVETEREKLLYLEDELHRRVIGQDEAVTAVAEAIQRSRA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +PT SF+FLGPTGVGKTELAK LA LFD E+ L+RIDMSEYME+H+VSRLIGA
Sbjct: 596 GLSDPNRPTASFIFLGPTGVGKTELAKTLANYLFDAEDALIRIDMSEYMEKHAVSRLIGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTE++RRRPY+V+LFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF
Sbjct: 656 PPGYVGYEEGGQLTESIRRRPYAVILFDEIEKAHPDVFNVLLQVLDDGRVTDSQGRTVDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NTVIIMTSN+G++++L + G + +VL+ + +FRPE LNR+D+ ++F L
Sbjct: 716 KNTVIIMTSNIGSQYILD-LAGDDKYDEMKARVLEALSHNFRPEFLNRIDDTIIFHSLQK 774
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
+LR + ++Q+ + RLA+R ++L + ++ALD ++ YDP+YGARP++R ++K++ T
Sbjct: 775 SELRNIVKIQVGRLEKRLADRKLSLKLAESALDFLVNVGYDPVYGARPLKRTIQKELETT 834
Query: 820 LSRMLVREEIDENSTVYID 838
+++ ++R + E T++++
Sbjct: 835 VAKGILRGDFKEGDTIFVE 853
>gi|291530227|emb|CBK95812.1| ATP-dependent chaperone ClpB [Eubacterium siraeum 70/3]
Length = 867
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/860 (51%), Positives = 612/860 (71%), Gaps = 27/860 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+N + T K+ EAI+ A +A S + H+ +ALL G+ Q I G + A
Sbjct: 2 LNTNNLTQKSMEAISTAQSIAVSYQNMNIEQQHILLALLQAEDGLIPQLIKKMGAD--AS 59
Query: 61 SAERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
R+ Q+ +P T + P+++ S + K A+ K D +++V+ L +GL
Sbjct: 60 QLTRLTEQSAAGIPKVTGSGRDPEKVYVSPDVDKAFTAAEEKAKQMKDEYISVEHLFIGL 119
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
LE +SQ+ D+F + G+ +E++RG +V + + T+ LK YG+DL E A
Sbjct: 120 LEKPNSQLKDIFAKCGITEKAFLQALEQVRG--SVRVTGQNPEETYDVLKKYGQDLTELA 177
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+ EGLA RIVRGDVP NL
Sbjct: 178 RQNKLDPVIGRDTEIRNVIRILSRKTKNNPVLIGEPGVGKTAIAEGLALRIVRGDVPENL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ ++ +LDMGALVAGAKYRGEFEERLKAVL+ ++++EG++ILFIDE+H ++GAG+T+G+
Sbjct: 238 KERQIFSLDMGALVAGAKYRGEFEERLKAVLQTIKKSEGQIILFIDELHTIVGAGKTDGA 297
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KP+LARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRG
Sbjct: 298 MDAGNLLKPLLARGELHCIGATTLNEYRQYIEKDAALERRFQPVMVNEPTVEDTISILRG 357
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HGV+I D AL+ AA LS RYI+ R LPDKAIDLVDEACA ++ +++S P E+
Sbjct: 358 LKERYEVFHGVKIHDSALIAAATLSDRYISDRFLPDKAIDLVDEACALIKTEMESMPSEL 417
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D++ RK MQ EIE AL+KE D+ S L EV++EL ++R K + +++ E+ I ++
Sbjct: 418 DDIRRKIMQHEIEEAALKKETDRISVEHLAEVQQELAEMRSKFNEMKAKWENERNAISKV 477
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAI--QEVEAAIGQLEGNQSDENLMLTET 531
++L+++ E +++AER YDL +AA+L+YG + + E + QS ML +
Sbjct: 478 QKLREEIESTNSLIEQAERSYDLNKAAELKYGKLPQLQKELEEEEKLAEQSKSASMLHDK 537
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IA+++ RWTGIPV++L + E+E+L IG EAV V+E++LRSRAG
Sbjct: 538 VTEEEIAKIICRWTGIPVSKLMEGEREKLLHMEDILHKRVIGQDEAVEKVSEAILRSRAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P QP GSFLFLGPTGVGKTELAKALAE LFDDE+ +VRIDMSEYME+ SVSRLIGAP
Sbjct: 598 IANPDQPIGSFLFLGPTGVGKTELAKALAEALFDDEHSMVRIDMSEYMEKFSVSRLIGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSVVL DEVEKAH VFN LLQ+LDDGR+TD QGRTVDF+
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQILDDGRITDSQGRTVDFK 717
Query: 701 NTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
NT+II+TSNLG+ ++L G+ G+++ + A+++V + ++ FRPE LNRLDEIV + PL
Sbjct: 718 NTIIILTSNLGSSYILDGINEKGEISEE-AKNEVNKLLKTQFRPEFLNRLDEIVFYKPLR 776
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
+++ + L + ++ RLA++ V A+TDAA D V+ +DP YGARP++R++++K+ T
Sbjct: 777 KDEISGIVDLMLGELKKRLADKEVGFAITDAAKDYVIDNGFDPNYGARPLKRFIQRKIET 836
Query: 819 ELSRMLVREEIDENSTVYID 838
++R L+ +++ ST+ +D
Sbjct: 837 LIARKLIADDVAPGSTLTVD 856
>gi|436841908|ref|YP_007326286.1| protein disaggregation chaperone [Desulfovibrio hydrothermalis AM13
= DSM 14728]
gi|432170814|emb|CCO24185.1| protein disaggregation chaperone [Desulfovibrio hydrothermalis AM13
= DSM 14728]
Length = 874
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/872 (51%), Positives = 616/872 (70%), Gaps = 34/872 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+KFT KTN+AIA A LA G Q HL +AL+ +GI ++ I + + +A
Sbjct: 1 MDPNKFTKKTNDAIAAAQSLAVKNGQQQIEVEHLLLALVEQENGIVSKIIQKSDIDPSAY 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ + + KLPS + P ++ + L ++I A+AA + D ++V+ L L +
Sbjct: 61 KS--AVQKEIGKLPSVSGPGAQPGQVLVTQRLNRIIVEAEAAAQRMQDEFISVEHLFLAI 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
+++ + G + K + +V + +RG + +V + + + T+ ALK YGRDLVE+
Sbjct: 119 MDEHGSTGAGRVNKSFNLTKDKVLEAMTTIRGNQ--RVTTDNPEATYDALKKYGRDLVEE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRRV+RILSRRTKNNP+LIGE GVGKTA++EGLAQRIV+ DVP
Sbjct: 177 ARKGKLDPVIGRDSEIRRVIRILSRRTKNNPILIGEAGVGKTAIIEGLAQRIVKRDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + LDMGAL+AGAKYRGEFEERLKAVLKEV+E++G++I+FIDEIH ++GAG+++G
Sbjct: 237 LKDKTVFMLDMGALIAGAKYRGEFEERLKAVLKEVQESDGQIIIFIDEIHTIVGAGKSDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATT +EYRKY+EKD A ERRFQ + V EP+ DT+SILR
Sbjct: 297 AMDAGNLLKPMLARGELHCIGATTTDEYRKYIEKDPALERRFQTIMVKEPTAEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA A +R ++DSQP E
Sbjct: 357 GLRERFEVHHGVRISDAALVEAATLSQRYITDRQLPDKAIDLIDEAAAMIRTEIDSQPYE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ +Q EIE AL +E+D+AS+ RL ++ L +++ K L+ +++KEK ID
Sbjct: 417 LDKINRQILQTEIEREALRREEDQASRERLSKLEDSLTEMKIKQSELVEQWEKEKASIDT 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQ----LEGNQ----SDE 524
+R LK + E+ ++EAER D RAA+L+Y + +E + + +EG + S+
Sbjct: 477 VRNLKAQIEQTKLQIEEAERSLDYNRAAELKYSTLLGLEKRLEEIQVDIEGGEDKASSNG 536
Query: 525 NLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAES 573
+ +L E VGPD IA ++SRWTGIPVTRL + E+E R+IG EAV AV+E+
Sbjct: 537 SRLLKEFVGPDDIAGIISRWTGIPVTRLVEGEREKLLRLEDILHGRVIGQDEAVRAVSEA 596
Query: 574 VLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV 633
VLR+RAGL P +P GSF+FLGPTGVGKTEL KALAE LFD E +VR+DMSEYME+H+V
Sbjct: 597 VLRARAGLKDPSRPIGSFIFLGPTGVGKTELCKALAEALFDSEENIVRMDMSEYMEKHAV 656
Query: 634 SRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQ 693
+RLIGAPPGY+G++EGGQLTEA+RR+PYSVVLFDE+EKAH VFN LLQ+LDDGR+TD Q
Sbjct: 657 ARLIGAPPGYIGYDEGGQLTEAIRRKPYSVVLFDEIEKAHSDVFNVLLQILDDGRITDSQ 716
Query: 694 GRTVDFRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEI 751
GRT+D +NT+IIMTSNLG++ LL G+ G+ V ++ V+ + HFRPE LNR+DE
Sbjct: 717 GRTIDCKNTIIIMTSNLGSQLLLEGIEPDGEFKNGV-QENVMNVLSGHFRPEFLNRVDET 775
Query: 752 VVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRW 811
V+F PL L+ + LQ++ + RL + ++L VT+ A + SYDP+YGARP+RR+
Sbjct: 776 VLFKPLLESDLKLIVDLQLEGLRARLGGQKMSLEVTENAKAFIAHASYDPVYGARPLRRY 835
Query: 812 LEKKVVTELSRMLVREEIDENSTVYIDASPKG 843
++ + T L++ ++ ++ E+ TV ID G
Sbjct: 836 IQAHLETPLAKQIIGGDLREDQTVTIDVDADG 867
>gi|167750558|ref|ZP_02422685.1| hypothetical protein EUBSIR_01534 [Eubacterium siraeum DSM 15702]
gi|167656484|gb|EDS00614.1| ATP-dependent chaperone protein ClpB [Eubacterium siraeum DSM
15702]
Length = 867
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/859 (51%), Positives = 610/859 (71%), Gaps = 25/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+N + T K+ EAI+ A +A S + H+ +ALL G+ Q I G + A
Sbjct: 2 LNTNNLTQKSMEAISTAQSIAVSYQNMNIEQQHILLALLQAEDGLIPQLIKKMGAD--AS 59
Query: 61 SAERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
R+ Q+ +P T + P+++ S + K A+ K D +++V+ L +GL
Sbjct: 60 QLTRLTEQSAAGIPKVTGSGRDPEKVYVSPDVDKAFTAAEEKAKQMKDEYISVEHLFIGL 119
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
LE +SQ+ D+F + G+ +E++RG +V + + T+ LK YG+DL E A
Sbjct: 120 LEKPNSQLKDIFAKCGITEKAFLQALEQVRG--SVRVTGQNPEETYDVLKKYGQDLTELA 177
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+ EGLA RIVRGDVP NL
Sbjct: 178 RQNKLDPVIGRDTEIRNVIRILSRKTKNNPVLIGEPGVGKTAIAEGLALRIVRGDVPENL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ ++ +LDMGALVAGAKYRGEFEERLKAVL+ ++++EG++ILFIDE+H ++GAG+T+G+
Sbjct: 238 KERQIFSLDMGALVAGAKYRGEFEERLKAVLQTIKKSEGQIILFIDELHTIVGAGKTDGA 297
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KP+LARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRG
Sbjct: 298 MDAGNLLKPLLARGELHCIGATTLNEYRQYIEKDAALERRFQPVMVNEPTVEDTISILRG 357
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HGV+I D AL+ AA LS RYI+ R LPDKAIDLVDEACA ++ +++S P E+
Sbjct: 358 LKERYEVFHGVKIHDSALIAAATLSDRYISDRFLPDKAIDLVDEACALIKTEMESMPSEL 417
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D++ RK MQ EIE AL+KE D+ S L EV++EL ++R K + +++ E+ I ++
Sbjct: 418 DDIRRKIMQHEIEEAALKKETDRISVEHLAEVQQELAEMRSKFNEMKAKWENERNAISKV 477
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAI--QEVEAAIGQLEGNQSDENLMLTET 531
++L+++ E +++AER YDL +AA+L+YG + + E + QS ML +
Sbjct: 478 QKLREEIESTNSLIEQAERSYDLNKAAELKYGKLPQLQKELEEEEKLAEQSKSASMLHDK 537
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IA+++ RWTGIPV++L + E+E+L IG EAV V+E++LRSRAG
Sbjct: 538 VTEEEIAKIICRWTGIPVSKLMEGEREKLLHMEDILHKRVIGQDEAVEKVSEAILRSRAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P QP GSFLFLGPTGVGKTELAKALAE LFDDE+ +VRIDMSEYME+ SVSRLIGAP
Sbjct: 598 IANPDQPIGSFLFLGPTGVGKTELAKALAEALFDDEHNMVRIDMSEYMEKFSVSRLIGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSVVL DEVEKAH VFN LLQ+LDDGR+TD QGRTVDF+
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQILDDGRITDSQGRTVDFK 717
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
NT+II+TSNLG+ ++L G+ K + + A+++V + ++ FRPE LNRLDEIV + PL
Sbjct: 718 NTIIILTSNLGSSYILDGINDKGEISEEAKNEVNKLLKTQFRPEFLNRLDEIVFYKPLRK 777
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
+++ + L + ++ RLA++ V A+TDAA D V+ +DP YGARP++R++++K+ T
Sbjct: 778 DEISGIVDLMLGELKKRLADKEVGFAITDAAKDYVIDNGFDPNYGARPLKRFIQRKIETL 837
Query: 820 LSRMLVREEIDENSTVYID 838
++R L+ +++ ST+ +D
Sbjct: 838 IARKLIADDVAPGSTLTVD 856
>gi|425434409|ref|ZP_18814878.1| Chaperone [Microcystis aeruginosa PCC 9432]
gi|425460090|ref|ZP_18839572.1| Chaperone [Microcystis aeruginosa PCC 9808]
gi|389676061|emb|CCH94825.1| Chaperone [Microcystis aeruginosa PCC 9432]
gi|389827257|emb|CCI21612.1| Chaperone [Microcystis aeruginosa PCC 9808]
Length = 872
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/857 (51%), Positives = 613/857 (71%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP +FT K EAI ++A Q HL ALL A ++ + + A+
Sbjct: 5 NPQQFTEKAWEAIVKTPDIAKQNSQQQIESEHLMKALLEQEG--LAGSVFSKANISLARL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + ++ P + D I +L ++ RA+ ++ GD ++++ LILG +D
Sbjct: 63 RDRT-DDFIRSQPKISNPGDSIYLGRSLDSLLDRAENYRREFGDDFISIEHLILGYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G ++F+E G+ ++K ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGKNIFQEFGLTENKLKEIIQQVRGSQ--KVTDQNPEGKYEALEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLLDRTL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LD+G L+AGAKYRGEFEERLKAVLKEV E++G +I+FIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDLGGLIAGAKYRGEFEERLKAVLKEVTESQGNIIMFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADNALVAAALLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L++E D AS+ RL ++ KEL +L+++ L +++ EKE ID +R +K+
Sbjct: 420 KILQLEMERLSLQREYDPASRERLEKLEKELANLKEEQSGLNAQWQGEKEIIDRVRGVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL----MLTETVGP 534
E++ +Q+AER YD RAA+L++G + +++ + LE +D+ +L E V
Sbjct: 480 AIEQVNLEIQQAERDYDYNRAAELKFGKLTDLQRQMSALETQLADKQTTGKSLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+ +L ++EKE+L IG EAV AVAE++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPLNKLIESEKEKLLNLEDELHESVIGQEEAVTAVAEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E LVRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHSVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDSQGHLVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + + +V++ +R FRPE LNR+DE ++F L QLR
Sbjct: 720 IIMTSNIGSQYILDVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDETIIFHSLQKAQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ +++ RL E+ +AL + D ALD + YDP+YGARP++R +++ V T +++
Sbjct: 780 SIVKLQTANLSDRLMEQKLALKLADIALDYLAEIGYDPVYGARPLKRAVQRYVETPIAKA 839
Query: 824 LVREEIDENSTVYIDAS 840
++R E T+++D +
Sbjct: 840 ILRGEFKGGDTIFVDVA 856
>gi|365127480|ref|ZP_09340050.1| ATP-dependent chaperone ClpB [Subdoligranulum sp. 4_3_54A2FAA]
gi|363624353|gb|EHL75430.1| ATP-dependent chaperone ClpB [Subdoligranulum sp. 4_3_54A2FAA]
Length = 864
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/859 (52%), Positives = 605/859 (70%), Gaps = 25/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN K T K+ EA+ A LA + P HL ALLS G+ Q G E
Sbjct: 1 MNAQKMTQKSLEALQAAQSLAVEYENQALCPEHLFCALLSQQDGLIPQLFQKMGAEPGNL 60
Query: 61 SAERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+A F + + +LP T P+++ + L + + A+ + A D +++V+ L+LG+
Sbjct: 61 AA--AFAKKVGELPHVTGTGRDPEKVYITPELDRALTAAEKSAAAMKDEYVSVEHLVLGM 118
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++ ++ + ++ ++ + R + ++RG + +V S + ++T+ L YG+DLVE A
Sbjct: 119 MDAPNAAVKEVLRQFSLDKTRFLEVLAQVRGNQ--RVTSDNPESTYDVLAKYGQDLVELA 176
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+ EGLA RIVRGDVP NL
Sbjct: 177 RQQKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIAEGLALRIVRGDVPENL 236
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D ++ +LDMGALVAGAKYRGEFEERLK+VL+EV+++EG++ILFIDE+H ++GAG+T+G+
Sbjct: 237 KDRKVFSLDMGALVAGAKYRGEFEERLKSVLQEVKKSEGQIILFIDELHTIVGAGKTDGA 296
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA N+ KPMLARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRG
Sbjct: 297 MDAGNILKPMLARGELHCIGATTLNEYRQYIEKDAALERRFQPVMVDEPTVEDTISILRG 356
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HGV+IQD AL+ AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E+
Sbjct: 357 LKERYEVFHGVKIQDNALIAAAVLSGRYITDRFLPDKAIDLVDEACAMIRTEMDSAPAEM 416
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D+L RK MQ EIE AL+KE DK S RL +++KEL +R++ + R++ EK I ++
Sbjct: 417 DDLRRKIMQHEIEEAALKKETDKLSAERLADIQKELAAMREEFSAMSARWENEKSAIGKV 476
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYG---AIQEVEAAIGQLEGNQSDENLMLTE 530
+ L+++ E++ + AER YDL RAA+L+YG A+Q+ ++ +L +
Sbjct: 477 QHLREEIEQVNGEIARAEREYDLNRAAELKYGRLPALQKELEQEEARAAAAEKDSTLLHD 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V ++IA +V RWTGIPV +L + E+E+L IG EAV V E++LRSRA
Sbjct: 537 RVTEEEIARIVGRWTGIPVAKLMEGEREKLLHLDGILHKRVIGQDEAVQRVTEAILRSRA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ +P GSFLFLGPTGVGKTELAKALAE LFDDE +VRIDMSEYME++SVSRLIGA
Sbjct: 597 GIADENRPIGSFLFLGPTGVGKTELAKALAEALFDDEKNIVRIDMSEYMEKYSVSRLIGA 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+II+TSNLG+ ++L G+ AR QV ++ FRPE LNRLDEIV + PLS
Sbjct: 717 KNTIIILTSNLGSNYILDGIENGEISPEARAQVDALLKTSFRPEFLNRLDEIVYYKPLSK 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
++ V L ++ + RLA + + LAVTDAA +++ YDP+YGARP++R++++KV T
Sbjct: 777 TEIAGVVDLMLESLVQRLAAKQLRLAVTDAAKQMIVDGGYDPVYGARPLKRYIQQKVETL 836
Query: 820 LSRMLVREEIDENSTVYID 838
++R +++ + T+ +D
Sbjct: 837 VARDIIQNDPAPGDTITVD 855
>gi|148560319|ref|YP_001259694.1| ATP-dependent chaperone ClpB [Brucella ovis ATCC 25840]
gi|148371576|gb|ABQ61555.1| ATP-dependent chaperone ClpB [Brucella ovis ATCC 25840]
Length = 931
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/864 (52%), Positives = 603/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 58 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 115
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 116 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 175
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 176 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 233
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 234 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 293
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 294 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 353
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 354 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 413
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 414 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 473
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 474 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 533
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 534 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 592
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E R++G EAV A++++V R+RAGL P
Sbjct: 593 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 652
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 653 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 712
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 713 YEEGGVLTEAVRRRPYQVNLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 772
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 773 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 831
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 832 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 891
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 892 LGDILDGSLVKITAG--SDRLNFR 913
>gi|260655863|ref|ZP_05861332.1| ATP-dependent chaperone protein ClpB [Jonquetella anthropi E3_33
E1]
gi|260629479|gb|EEX47673.1| ATP-dependent chaperone protein ClpB [Jonquetella anthropi E3_33
E1]
Length = 868
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/878 (51%), Positives = 618/878 (70%), Gaps = 35/878 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K+ EA+A A +A + GH Q HLA+AL+ G+ ++ G + A
Sbjct: 1 MDLNKLTQKSQEALAEAQNIAVTHGHQQVGLEHLALALVGAKDGLIPSLLDKCGADVRAL 60
Query: 61 SAERVFNQAMKKLPSQTPAPD--EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A + + K P T D +I ST L +++ A+ ++ D +++V+ L L L
Sbjct: 61 PAR--LEELLAKRPKITGGYDIEKIYLSTDLSQLLLNAEKCAQSMKDEYVSVEHLFLALF 118
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ S G AG+ + +RG +V+SA+ + T++ALK YG DLV A
Sbjct: 119 DFPTSPTGQALAAAGLTKEGFLKALTGVRG--ATRVQSANPEETYEALKKYGTDLVAAAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD EI RV++ILSR++KNNPVLIGEPGVGKTA+VEGLA RIVRGDVP L
Sbjct: 177 DGKLDPVIGRDAEILRVIQILSRKSKNNPVLIGEPGVGKTAIVEGLAARIVRGDVPEGLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + ALDMG+L+AGAKYRGEFEERLKAV+ EV+ AEG++ILFIDE+H ++GAG+TEGSM
Sbjct: 237 NRTIFALDMGSLIAGAKYRGEFEERLKAVISEVKAAEGQIILFIDELHTIVGAGKTEGSM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATTL+EYR ++EKDAA ERRFQ V V P+ D +SILRGL
Sbjct: 297 DAGNLLKPMLARGELHCIGATTLDEYRLHIEKDAALERRFQPVRVEPPTPEDAISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
K++++ HGVRI D A+V A LS RYI+ R LPDKAIDLVDEACA V+ +++S+P E+D
Sbjct: 357 KDRFQVFHGVRIADSAIVAAVTLSDRYISDRFLPDKAIDLVDEACAMVKTEINSRPSELD 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ ++LEIE AL+KE+D AS RL E++KEL D R++ L RY+ EK R+ +++
Sbjct: 417 AVSRRVVRLEIEEAALKKERDDASARRLAELQKELADAREQQNELTARYESEKSRLTDVQ 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEV-------EAAIGQLEGNQSDENLM 527
L+++ E L++AER YDL R A+LR+G + ++ E A+ + G +S +
Sbjct: 477 ALRERIEAAKVELEKAERAYDLERMAELRHGELPKLTEELAKKEKALKEASGGES----L 532
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLR 576
L E+V D+IA +VS WTGIPVT+L Q+E+++L IG +AV VA++VLR
Sbjct: 533 LRESVTEDEIARIVSDWTGIPVTKLVQSERDKLLHLDDELHKGVIGQDQAVQLVADAVLR 592
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
+RAG+ P++P GSF+FLGPTGVGKTELA+ LA LFD EN +VRIDMSEYME++SVSRL
Sbjct: 593 ARAGIRDPKRPIGSFIFLGPTGVGKTELARVLARTLFDSENNMVRIDMSEYMEKYSVSRL 652
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
+GAPPGYVG++EGGQLTEA+RR+PY V+LFDE+EKAH VFN LLQ+LDDGR+TD GRT
Sbjct: 653 LGAPPGYVGYDEGGQLTEAIRRKPYCVLLFDEIEKAHPDVFNVLLQILDDGRVTDSHGRT 712
Query: 697 VDFRNTVIIMTSNLGAEHLLSGMM-GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFD 755
VDF+NTVIIMTSN+G++ LL G+ G Q RDQV+ +++ HFRPE LNR+D+ V+F
Sbjct: 713 VDFKNTVIIMTSNIGSQMLLDGVTDGGEIPQPVRDQVMAQLKGHFRPEFLNRVDDTVIFS 772
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PLS E LR++A L ++ + RLA + L VTD ALD+++ +SY+P YGARP++R++
Sbjct: 773 PLSRENLRQIAVLLLRGLTDRLAGQSTVLRVTDEALDLIIRQSYEPSYGARPLKRYISHN 832
Query: 816 VVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKN 853
+ T ++R L+ EN+ + +DAS GD L R +KN
Sbjct: 833 LETLVARYLIANGPAENAALVVDAS--GDELTLRTEKN 868
>gi|225853303|ref|YP_002733536.1| ATP-dependent chaperone ClpB [Brucella melitensis ATCC 23457]
gi|256263208|ref|ZP_05465740.1| chaperone protein clpB [Brucella melitensis bv. 2 str. 63/9]
gi|260562786|ref|ZP_05833272.1| chaperone clpB [Brucella melitensis bv. 1 str. 16M]
gi|384212217|ref|YP_005601301.1| ATP-dependent chaperone ClpB [Brucella melitensis M5-90]
gi|384409321|ref|YP_005597942.1| ATP-dependent chaperone ClpB [Brucella melitensis M28]
gi|384445863|ref|YP_005604582.1| ATP-dependent chaperone ClpB [Brucella melitensis NI]
gi|54035875|sp|Q8YJ91.2|CLPB_BRUME RecName: Full=Chaperone protein ClpB
gi|225641668|gb|ACO01582.1| ATP-dependent chaperone ClpB [Brucella melitensis ATCC 23457]
gi|260152802|gb|EEW87894.1| chaperone clpB [Brucella melitensis bv. 1 str. 16M]
gi|263093152|gb|EEZ17266.1| chaperone protein clpB [Brucella melitensis bv. 2 str. 63/9]
gi|326409868|gb|ADZ66933.1| ATP-dependent chaperone ClpB [Brucella melitensis M28]
gi|326539582|gb|ADZ87797.1| ATP-dependent chaperone ClpB [Brucella melitensis M5-90]
gi|349743852|gb|AEQ09395.1| ATP-dependent chaperone ClpB [Brucella melitensis NI]
Length = 874
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/864 (52%), Positives = 603/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAAMLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E R++G EAV A++++V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQG TVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGHTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 835 LGDILDGSLVKITAG--SDRLNFR 856
>gi|17986479|ref|NP_539113.1| ATP-dependent Clp protease, ATP-binding subunit CLPB [Brucella
melitensis bv. 1 str. 16M]
gi|17982078|gb|AAL51377.1| ATP-dependent clp protease, ATP-binding subunit clpb [Brucella
melitensis bv. 1 str. 16M]
Length = 931
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/864 (52%), Positives = 603/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 58 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 115
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 116 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 175
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 176 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 233
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 234 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 293
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 294 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 353
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 354 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 413
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 414 KYEQHHKVRVSDSALVAAAMLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 473
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 474 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 533
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 534 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 592
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E R++G EAV A++++V R+RAGL P
Sbjct: 593 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 652
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 653 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 712
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQG TVDFRNTVII
Sbjct: 713 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGHTVDFRNTVII 772
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 773 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 831
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 832 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 891
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 892 LGDILDGSLVKITAG--SDRLNFR 913
>gi|260884573|ref|ZP_05896187.1| chaperone protein clpB [Brucella abortus bv. 9 str. C68]
gi|260874101|gb|EEX81170.1| chaperone protein clpB [Brucella abortus bv. 9 str. C68]
Length = 874
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/864 (52%), Positives = 603/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRAIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+ DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTAEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E+L +G EAV A++++V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 835 LGDILDGSLVKITAG--SDRLNFR 856
>gi|440753054|ref|ZP_20932257.1| ATP-dependent chaperone ClpB [Microcystis aeruginosa TAIHU98]
gi|440177547|gb|ELP56820.1| ATP-dependent chaperone ClpB [Microcystis aeruginosa TAIHU98]
Length = 872
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/857 (51%), Positives = 615/857 (71%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP +FT K EAI ++A Q HL ALL A ++ + + A+
Sbjct: 5 NPQQFTEKAWEAIVKTPDIAKQNSQQQIESEHLMKALLEQEG--LAGSVFSKANISLARL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + +++ P + D I +L ++ RA+ ++ GD ++++ LILG +D
Sbjct: 63 RDRT-DDFIRRQPKISNPGDSIYLGRSLDSLLDRAENYRREFGDDFISIEHLILGYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G ++F+E G+ ++K ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGKNIFQEFGLTENKLKEIIQQVRGSQ--KVTDQNPEGKYEALEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLLDRTL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LD+G L+AGAKYRGEFEERLKAVLKEV +++G +I+FIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDLGGLIAGAKYRGEFEERLKAVLKEVTDSQGNIIMFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADNALVAAALLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L++E D AS+ RL ++ KEL +L+++ L +++ EKE ID++R +K+
Sbjct: 420 KILQLEMERLSLQREYDPASRERLEKLEKELANLKEEQSGLNAQWQGEKEIIDKVRGVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL----MLTETVGP 534
E++ +Q+AER YD RAA+L++G + +++ + LE +D+ +L E V
Sbjct: 480 AIEQVNLEIQQAERDYDYNRAAELKFGKLTDLQRQMSALETQLADKQTTGKSLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+ +L ++EKE+L IG EAV AVAE++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPLNKLIESEKEKLLNLEDELHESVIGQEEAVTAVAEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E LVRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHSVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDSQGHLVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + + +V++ +R FRPE LNR+DE ++F L QLR
Sbjct: 720 IIMTSNIGSQYILDVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDETIIFHSLQKAQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ +++ RL E+ +AL + D ALD + YDP+YGARP++R +++ V T +++
Sbjct: 780 SIVKLQTANLSDRLMEQKLALKLADIALDYLAEIGYDPVYGARPLKRAVQRYVETPIAKA 839
Query: 824 LVREEIDENSTVYIDAS 840
++R E T+++D +
Sbjct: 840 ILRGEFKGGDTIFVDVA 856
>gi|218530577|ref|YP_002421393.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens CM4]
gi|218522880|gb|ACK83465.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens CM4]
Length = 874
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/861 (53%), Positives = 600/861 (69%), Gaps = 23/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + + A LA G+ Q P HL LL DP G+ A I+ AGG++
Sbjct: 1 MNFEKYTERARGFVQAAQNLAVREGNPQLAPGHLLKVLLDDPEGLCAGLIDRAGGQSRVA 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A+ Q + K P + + A+ L+++ A+ A + GD+++ V++L+L
Sbjct: 61 HAQ--VEQWLAKQPKVSGNAAQPQATRELVRLFDTAEQAAEKAGDSYVTVERLLLAFAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+D + G + AGV A + + + LR +GR ++AS + + ALK Y RDL E A G
Sbjct: 119 KDGEAGRILTAAGVTAASLNAAINALR--KGRTADNASAENAYDALKKYARDLTEAAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L +
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKEK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
L+ALDMGAL+AGAKYRGEFEERLK VL EV AEG++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 SLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGQIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+DN+
Sbjct: 357 KYEQHHGVRIQDSALVAAATLSNRYITDRFLPDKAIDLVDEAGSRLRMQVDSKPEELDNV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ ++L+IE AL+KE D AS+ RL + KEL DL ++ + R+K EK+++ L
Sbjct: 417 DREIVRLKIEGEALKKETDSASRDRLQRLEKELADLEEQSATITARWKAEKDKLGAAAEL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTETVG 533
K+K +E L A+R+ RA +L YG I +E + ++E + M+ E V
Sbjct: 477 KKKLDESRNELASAQRQGQYQRAGELAYGVIPGLEKQLSEIEAAAESAVARDGMVEEAVT 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
P IA VVSRWTG+PV ++ + E+E R++G EAV AV+ +V R+RAGL
Sbjct: 537 PAHIAGVVSRWTGVPVDKMLEGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQ 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTEL KALA LFDD+ LVRIDMSEYME+H+V+RLIGAPPG
Sbjct: 597 DPNRPIGSFMFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVARLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 657 YVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++IMTSNLG+E+L++ G+ T V RD+V+ VR HFRPE LNR+DEI++F L+ ++
Sbjct: 717 LLIMTSNLGSEYLVNQPAGQDT-DVVRDEVMGVVRGHFRPEFLNRVDEIILFHRLARSEM 775
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ +A L +R + L V A + + YDP YGARP++R ++K V L+
Sbjct: 776 GAIVDIQLGRLAKLLEDRKITLDVDGEARTWLADKGYDPAYGARPLKRVIQKNVQDPLAE 835
Query: 823 MLVREEIDENSTVYIDASPKG 843
++ I + TV + P G
Sbjct: 836 AILSGVIHDGETVPVRVGPAG 856
>gi|163851769|ref|YP_001639812.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens PA1]
gi|240138934|ref|YP_002963409.1| protein disaggregation chaperone [Methylobacterium extorquens AM1]
gi|163663374|gb|ABY30741.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens PA1]
gi|240008906|gb|ACS40132.1| protein disaggregation chaperone [Methylobacterium extorquens AM1]
Length = 874
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/861 (53%), Positives = 600/861 (69%), Gaps = 23/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + + A LA G+ Q P HL LL DP G+ A I+ AGG++
Sbjct: 1 MNFEKYTERARGFVQAAQNLAVREGNPQLAPGHLLKVLLDDPEGLCAGLIDRAGGQSRVA 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A+ Q + K P + + A+ L+++ A+ A + GD+++ V++L+L
Sbjct: 61 HAQ--VEQWLAKQPKVSGNAAQPQATRELVRLFDTAEQAAEKAGDSYVTVERLLLAFAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+D + G + AGV A + + + LR +GR ++AS + + ALK Y RDL E A G
Sbjct: 119 KDGEAGRILTAAGVTAASLNAAINALR--KGRTADNASAENAYDALKKYARDLTEAAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L +
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKEK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
L+ALDMGAL+AGAKYRGEFEERLK VL EV AEG++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 SLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGQIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+DN+
Sbjct: 357 KYEQHHGVRIQDSALVAAATLSNRYITDRFLPDKAIDLVDEAGSRLRMQVDSKPEELDNV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ ++L+IE AL+KE D AS+ RL + KEL DL ++ + R+K EK+++ L
Sbjct: 417 DREIVRLKIEGEALKKETDSASRDRLQRLEKELADLEEQSATITARWKAEKDKLGAAAEL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTETVG 533
K+K +E L A+R+ RA +L YG I +E + ++E + M+ E V
Sbjct: 477 KKKLDEARNELASAQRQGQYQRAGELAYGVIPGLEKQLSEIEAAAESAVARDGMVEEAVT 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
P IA VVSRWTG+PV ++ + E+E R++G EAV AV+ +V R+RAGL
Sbjct: 537 PAHIAGVVSRWTGVPVDKMLEGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQ 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTEL KALA LFDD+ LVRIDMSEYME+H+V+RLIGAPPG
Sbjct: 597 DPNRPIGSFMFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVARLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 657 YVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++IMTSNLG+E+L++ G+ T V RD+V+ VR HFRPE LNR+DEI++F L+ ++
Sbjct: 717 LLIMTSNLGSEYLVNQPAGQDT-DVVRDEVMGVVRGHFRPEFLNRVDEIILFHRLARSEM 775
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ +A L +R + L V A + + YDP YGARP++R ++K V L+
Sbjct: 776 GAIVDIQLGRLAKLLEDRKITLDVDGEARTWLADKGYDPAYGARPLKRVIQKNVQDPLAE 835
Query: 823 MLVREEIDENSTVYIDASPKG 843
++ I + TV + P G
Sbjct: 836 AILSGVIHDGETVPVRVGPAG 856
>gi|404316527|ref|ZP_10964460.1| ATPase [Ochrobactrum anthropi CTS-325]
Length = 873
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/854 (53%), Positives = 603/854 (70%), Gaps = 21/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ + I AGG A
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHVLKVLVDDDEGLASSLIERAGGRIA-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A++KLP + D++ S L KV A+ GD+ + V++L++ L
Sbjct: 59 DVRIGLQNALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLMALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNKVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+++G+MDA
Sbjct: 237 RLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKSDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK R + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRFQRLEKELTDLEEESAELTSKWQSEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + + E +++ +L L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRSGEFQKAGELAYGKIPQLEKQLVEAESHENKGSL-LEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+++SRWTGIPV R+ + E+E+L IG EAV A++++V R+RAGL P
Sbjct: 536 VAQIISRWTGIPVDRMLEGEREKLLRMEDELAKRVIGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALAAFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + K ++ R++V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGEKDDVESVREEVMGVVRAAFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + + L +R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQMLLTDRKIVLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDA 839
+I + S V I A
Sbjct: 835 LGDILDGSIVKITA 848
>gi|320451090|ref|YP_004203186.1| ATP-dependent chaperone protein ClpB [Thermus scotoductus SA-01]
gi|320151259|gb|ADW22637.1| ATP-dependent chaperone protein ClpB [Thermus scotoductus SA-01]
Length = 861
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/865 (53%), Positives = 611/865 (70%), Gaps = 25/865 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MN +++T EA+A A LA H HL LL DP+G+ + + AGG A
Sbjct: 1 MNLERWTQAAREALAQAQVLAREMKHQAIDLPHLWAVLLKDPTGLAWRLLERAGGNPKAL 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+SAER + +LP A S L + + RA+A D +A+D L+L L
Sbjct: 61 KESAER----ELGRLPKVEGAEVGQYLSQRLARALDRAEALMGELKDRFVALDTLVLALA 116
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
E S+ F+ ++ +++LRG G+ V++ ++T+ AL+ YG DL + A G
Sbjct: 117 EASRAEPSFQVGIPEEGSLRKALQELRG--GKTVQTEHAESTYNALEQYGIDLTKLAAEG 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR ++IL RRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L
Sbjct: 175 KLDPVIGRDEEIRRTIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
R+I+L MG+L+AGAKYRGEFEERLKAV++EV +++G++ILFIDE+H V+GAG+ EG++DA
Sbjct: 235 RIISLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEIILFIDELHTVVGAGKAEGAVDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KP LARG+LR IGATTL+EYR+ +EKD A ERRFQ V+V EPSV +T+SILRG+KE
Sbjct: 295 GNMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVFVDEPSVEETISILRGIKE 353
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA A +R+ L+S PEEID L
Sbjct: 354 KYEVHHGVRISDPALVAAAVLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDTL 413
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ERK++QLEIE AL+KEKD S+ RL + +E+ L ++Q L ++ E+E + ++R
Sbjct: 414 ERKKLQLEIEREALKKEKDPDSQERLKAIEEEIAHLNQEIQKLKAEWEAEREVLKKLREA 473
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
+Q+ +E+ ++ AER+YDL RAA+LRYG + +EA + L + + E D
Sbjct: 474 QQRLDEVRRQIELAERQYDLNRAAELRYGELPRLEAEVEALSEKLKNARFVRLEVTEED- 532
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IAE+VSRWTGIPV++L + E+E+L +G EA+ AVA+++ R+RAGL P
Sbjct: 533 IAEIVSRWTGIPVSKLLEGEREKLLRLEDELHKRVVGQEEAIRAVADAIRRARAGLKDPN 592
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSFLFLGPTGVGKTELAK LA LFD E +VRIDM+EYME+H+VSRLIGAPPGYVG
Sbjct: 593 RPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMVRIDMTEYMEKHAVSRLIGAPPGYVG 652
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGGQLTEAVRRRPY+V+LFDE+EKAH VFN LLQ+LDDGRLTD GRTVDFRNTVII
Sbjct: 653 YEEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVII 712
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
+TSNLG+ +L G+ + + R++V ++KHFRPE LNRLDEIVVF PL+ EQLR++
Sbjct: 713 LTSNLGSPLILEGIQKGLPYERIREEVFAVLQKHFRPEFLNRLDEIVVFRPLTREQLREI 772
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q++ + RLAE+ + L +T+AA D + YDP++GARP++R + +++ T L+ ++
Sbjct: 773 VEIQLQSLRARLAEKRITLTLTEAAKDYLAERGYDPVFGARPLKRVIARELETPLAVKIL 832
Query: 826 REEIDENSTVYIDASPKGDNLVYRV 850
EI E V +DA P G LV+R
Sbjct: 833 AGEIKEGDAVVVDAGPTG--LVFRT 855
>gi|113953637|ref|YP_731101.1| ATP-dependent Clp protease Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. CC9311]
gi|113880988|gb|ABI45946.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. CC9311]
Length = 863
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/869 (51%), Positives = 619/869 (71%), Gaps = 28/869 (3%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG-GEN 57
M P ++FT K AI A +LA + H Q HL ALL D G+ + ++ AG
Sbjct: 1 MQPTAEQFTEKAWSAITSAQQLAQNRRHQQLESEHLLRALL-DQEGLAGRILDKAGVSST 59
Query: 58 AAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
A Q++ F + + P+ + APD + L ++ RA+ ++++GD+ ++++ L+L L
Sbjct: 60 ALQTSVDTF---LSQQPALSNAPDSVFLGKGLNALLDRAETLKQSYGDSFISIEHLLLAL 116
Query: 118 LEDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+D + G L +AG +R+K+ + +RG + KV + + T+++L+ YGRDL A
Sbjct: 117 ADDGRCGRQLLSQAGTDTSRLKTAINAVRGSQ--KVTDQNPEGTYESLEKYGRDLTSAAR 174
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L
Sbjct: 175 EGKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPQALQ 234
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ +LIALDMGAL+AGAKYRGEFEERLKAVLKEV +EG+++LFIDEIH V+GAG T G+M
Sbjct: 235 NRQLIALDMGALIAGAKYRGEFEERLKAVLKEVTNSEGQIVLFIDEIHTVVGAGATGGAM 294
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA+NL KPMLARG+LRCIGATTL+E+R+++EKD A ERRFQQV V +P+V DT+SILRGL
Sbjct: 295 DASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVEDTISILRGL 354
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGVRI D ALV AA LS+RYI R LPDKAIDLVDE+ A +++++ S+PEEID
Sbjct: 355 KERYEVHHGVRIADSALVAAAVLSSRYIADRFLPDKAIDLVDESAARLKMEITSKPEEID 414
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
++RK +QLE+E +L +E D AS+ RL + +EL +L ++ L ++++EK IDE+
Sbjct: 415 EIDRKILQLEMEKLSLGRESDAASQERLQRLERELAELSEQQSTLNAQWQQEKGAIDELS 474
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-----GQLEGNQSDENLMLT 529
LK++ E + +++A+R YDL +AA+L YG + ++ + +E + + E +L
Sbjct: 475 ALKEEIERVQLQVEQAKRNYDLNKAAELEYGTLAGLQKQLLAQEQALVETDDNAEKSLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSR 578
E V D IAEV+++WTGIPV +L Q+E E+L +G +AV AVA+++ RSR
Sbjct: 535 EEVSEDDIAEVIAKWTGIPVAKLVQSEMEKLLKLEDQLHQRVVGQNQAVTAVADAIQRSR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P QP SFLFLGPTGVGKTEL+KALA QLFD E+ LVRIDMSEYME+H+VSRLIG
Sbjct: 595 AGLSDPNQPIASFLFLGPTGVGKTELSKALAAQLFDSEDALVRIDMSEYMEKHTVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+E GGQLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTVD
Sbjct: 655 APPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F N V+I+TSN+G++ +L Q +V + +R HFRPE LNR+D+ ++F L
Sbjct: 715 FTNAVLILTSNIGSQSILDLGGDDSQHQEMESRVNEALRNHFRPEFLNRIDDTIIFHSLR 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++LR + LQ++ + RL+ER + L +++ A D + YDP+YGARP++R +++++ T
Sbjct: 775 RDELRLIVALQVERLRKRLSERKLDLHISEEATDWLANAGYDPVYGARPLKRAIQRELET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPKGDNLV 847
+++ ++ +E S+V I + NL+
Sbjct: 835 PIAKAILSGAYEEGSSVQIQVKEERLNLL 863
>gi|422302916|ref|ZP_16390274.1| Chaperone [Microcystis aeruginosa PCC 9806]
gi|389792189|emb|CCI12069.1| Chaperone [Microcystis aeruginosa PCC 9806]
Length = 872
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/857 (51%), Positives = 615/857 (71%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP +FT K EAI ++A Q HL ALL A ++ + + A+
Sbjct: 5 NPQQFTEKAWEAIVKTPDIAKQHSQQQIESEHLMKALLEQEG--LAGSVFSKANISLARL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + +++ P + D I +L ++ RA+ ++ GD ++++ LILG +D
Sbjct: 63 RDRT-DDFIRRQPKISNPGDSIYLGRSLDSLLDRAENYRREFGDDFISIEHLILGYAKDE 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G ++F+E G+ ++K ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGKNIFQEFGLTENKLKEIIQQVRGSQ--KVTDQNPEGKYEALEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLLDRTL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LD+G L+AGAKYRGEFEERLKAVLKEV +++G +I+FIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDLGGLIAGAKYRGEFEERLKAVLKEVTDSQGNIIMFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADNALVAAALLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L++E D AS+ RL ++ KEL +L+++ L +++ EKE ID++R +K+
Sbjct: 420 KILQLEMEKLSLQREYDPASRERLEKLEKELANLKEEQSGLNAQWQGEKEIIDKVRGVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL----MLTETVGP 534
E++ +Q+AER YD RAA+L++G + +++ + LE +D+ +L E V
Sbjct: 480 AIEQVNLEIQQAERDYDYNRAAELKFGKLTDLQRQMSALETQLADKQTTGKSLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+ +L ++EKE+L IG EAV AVAE++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPLNKLIESEKEKLLNLEDELHESVIGQEEAVTAVAEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E LVRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHSVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDSQGHLVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + + +V++ +R FRPE LNR+DE ++F L QLR
Sbjct: 720 IIMTSNIGSQYILDVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDETIIFHSLQKAQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ+ +++ RL E+ +AL D ALD + YDP+YGARP++R +++ V T +++
Sbjct: 780 SIVKLQIGNLSDRLIEQKLALKFADIALDYLAEIGYDPVYGARPLKRAVQRYVETPIAKA 839
Query: 824 LVREEIDENSTVYIDAS 840
++R E T+++D +
Sbjct: 840 ILRGEFKGGDTIFVDVA 856
>gi|424844376|ref|ZP_18268987.1| ATP-dependent chaperone ClpB [Jonquetella anthropi DSM 22815]
gi|363985814|gb|EHM12644.1| ATP-dependent chaperone ClpB [Jonquetella anthropi DSM 22815]
Length = 868
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/878 (51%), Positives = 618/878 (70%), Gaps = 35/878 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K+ EA+A A +A + GH Q HLA+AL+ G+ ++ G + A
Sbjct: 1 MDLNKLTQKSQEALAEAQNIAVTHGHQQVGLEHLALALVGAKDGLTPSLLDKCGADVRAL 60
Query: 61 SAERVFNQAMKKLPSQTPAPD--EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A + + K P T D +I ST L +++ A+ ++ D +++V+ L L L
Sbjct: 61 PAR--LEELLAKRPKITGGYDIEKIYLSTDLSQLLLNAEKCAQSMKDEYVSVEHLFLALF 118
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ S G AG+ + +RG +V+SA+ + T++ALK YG DLV A
Sbjct: 119 DFPTSPTGQALAAAGLTKEGFLKALTGVRG--ATRVQSANPEETYEALKKYGTDLVAAAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD EI RV++ILSR++KNNPVLIGEPGVGKTA+VEGLA RIVRGDVP L
Sbjct: 177 DGKLDPVIGRDAEILRVIQILSRKSKNNPVLIGEPGVGKTAIVEGLAARIVRGDVPEGLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + ALDMG+L+AGAKYRGEFEERLKAV+ EV+ AEG++ILFIDE+H ++GAG+TEGSM
Sbjct: 237 NRTIFALDMGSLIAGAKYRGEFEERLKAVISEVKAAEGQIILFIDELHTIVGAGKTEGSM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATTL+EYR ++EKDAA ERRFQ V V P+ D +SILRGL
Sbjct: 297 DAGNLLKPMLARGELHCIGATTLDEYRLHIEKDAALERRFQPVRVEPPTPEDAISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
K++++ HGVRI D A+V A LS RYI+ R LPDKAIDLVDEACA V+ +++S+P E+D
Sbjct: 357 KDRFQVFHGVRIADSAIVAAVTLSDRYISDRFLPDKAIDLVDEACAMVKTEINSRPSELD 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ ++LEIE AL+KE+D AS RL E++KEL D R++ L RY+ EK R+ +++
Sbjct: 417 AVSRRVVRLEIEEAALKKERDDASARRLAELQKELADAREQQNELTARYESEKSRLTDVQ 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEV-------EAAIGQLEGNQSDENLM 527
L+++ E L++AER YDL R A+LR+G + ++ E A+ + G +S +
Sbjct: 477 ALRERIEAAKVELEKAERAYDLERMAELRHGELPKLTEELAKKEKALKEASGGES----L 532
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLR 576
L E+V D+IA +VS WTGIPVT+L Q+E+++L IG +AV VA++VLR
Sbjct: 533 LRESVTEDEIARIVSDWTGIPVTKLVQSERDKLLHLDDELHKGVIGQDQAVQLVADAVLR 592
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
+RAG+ P++P GSF+FLGPTGVGKTELA+ LA LFD EN +VRIDMSEYME++SVSRL
Sbjct: 593 ARAGIRDPKRPIGSFIFLGPTGVGKTELARVLARTLFDSENNMVRIDMSEYMEKYSVSRL 652
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
+GAPPGYVG++EGGQLTEA+RR+PY V+LFDE+EKAH VFN LLQ+LDDGR+TD GRT
Sbjct: 653 LGAPPGYVGYDEGGQLTEAIRRKPYCVLLFDEIEKAHPDVFNVLLQILDDGRVTDSHGRT 712
Query: 697 VDFRNTVIIMTSNLGAEHLLSGMM-GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFD 755
VDF+NTVIIMTSN+G++ LL G+ G Q RDQV+ +++ HFRPE LNR+D+ V+F
Sbjct: 713 VDFKNTVIIMTSNIGSQMLLDGVTDGGEIPQPVRDQVMAQLKGHFRPEFLNRIDDTVIFS 772
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PLS E LR++A L ++ + RLA + L VTD ALD+++ +SY+P YGARP++R++
Sbjct: 773 PLSRENLRQIAVLLLRGLTDRLAGQSTVLRVTDEALDLIIRQSYEPSYGARPLKRYISHN 832
Query: 816 VVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKN 853
+ T ++R L+ EN+ + +DAS GD L R +KN
Sbjct: 833 LETLVARYLIANGPAENAALVVDAS--GDELTLRTEKN 868
>gi|182413767|ref|YP_001818833.1| ATP-dependent chaperone ClpB [Opitutus terrae PB90-1]
gi|177840981|gb|ACB75233.1| ATP-dependent chaperone ClpB [Opitutus terrae PB90-1]
Length = 872
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/866 (53%), Positives = 621/866 (71%), Gaps = 27/866 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINN-AGGENAA 59
M+ K T + +A+ A +A H + HL ALL +GI ++ A +A
Sbjct: 1 MDFAKLTQMSRQAVTEAQNVARRLHHNEVDTWHLLSALLGQENGIVPGLLDKLAITPSAV 60
Query: 60 QSAERVFNQAMKKLPSQTPAPD--EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
Q A + +++LP T + D ++ + + + + RA+ D +++V+ L LGL
Sbjct: 61 QLA---VERELERLPKVTGSVDTSKVYVTQAVNEALTRAEDEAGKLKDEYVSVEHLFLGL 117
Query: 118 LEDSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
LE + + LFK G+ A+V ++ +RG ++V + + + T+QAL+ YG DLV Q
Sbjct: 118 LEVGKPDALKKLFKSFGLDRAKVLKALQDVRG--AQRVTTDNPEATYQALEKYGIDLVAQ 175
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GK+DPVIGRDEEIRR +RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRI+RGDVP
Sbjct: 176 ARKGKMDPVIGRDEEIRRTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRILRGDVPEG 235
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMGALVAGAKYRGEFEERLKAVL E++++EG+V+LFIDE+HL++GAG+TEG
Sbjct: 236 LKDKTIFALDMGALVAGAKYRGEFEERLKAVLTEIKQSEGRVLLFIDELHLIVGAGKTEG 295
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATTL+EYRK++EKDAA ERRFQ V V +PSV D +SILR
Sbjct: 296 AMDAGNLLKPMLARGELHCIGATTLDEYRKHIEKDAALERRFQPVVVDQPSVEDAISILR 355
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGV+IQD ALV A LS RYI+ R LPDKAIDLVDEACA +R ++DS P+E
Sbjct: 356 GLRERFELHHGVKIQDNALVSAVTLSNRYISDRFLPDKAIDLVDEACAMIRTEMDSMPQE 415
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D L R+ ++LEIE AL KEKD+AS RL +RKEL + R+K + + M ++KEK I
Sbjct: 416 LDELTRRVLRLEIEETALAKEKDEASARRLESLRKELAEAREKAKAIRMHWEKEKAAIGR 475
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETV 532
R+L+++ E +++AER YDL + A+LR+G I ++EA + +LE + L E V
Sbjct: 476 TRKLREEIEAARLEMEKAERAYDLNKVAELRHGKIPQMEAELKKLEQAGAGATL-FKEEV 534
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
++IAEVVS+W+G+PVTRL + EKE+L +G EAV V E++LR+R+G+
Sbjct: 535 SEEEIAEVVSKWSGVPVTRLVEGEKEKLLRLEEVLHQRVVGQDEAVTLVTEAILRARSGI 594
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P++P GSFLFLGPTGVGKTELAK LAE LFD E +VRIDMSEYME+HSV+R+IGAPP
Sbjct: 595 KDPRRPVGSFLFLGPTGVGKTELAKTLAETLFDSEAAMVRIDMSEYMEKHSVARMIGAPP 654
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PY+VVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+N
Sbjct: 655 GYVGYDEGGQLTEAVRRKPYAVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKN 714
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
TVIIMTSN+G+ +LL G+ G R+ V+ E+RK FRPE LNR+DE ++F PL+ E+
Sbjct: 715 TVIIMTSNIGSRYLLEGVSGSSIPDSVRESVMAELRKSFRPEFLNRIDETILFKPLTLEE 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L + D+ RLA+R V +++ A + + YDP++GARP++R+L++ + T+L+
Sbjct: 775 ITTIVDLLLADLNKRLADRRVTVSLDAKAKEWTAEKGYDPVFGARPLKRFLQRNIETKLA 834
Query: 822 RMLVREEIDENSTVYIDASPKGDNLV 847
R L+ E+ E+S V + K D LV
Sbjct: 835 RALISGEVGEDSAVKF--TIKNDELV 858
>gi|410465014|ref|ZP_11318388.1| ATP-dependent chaperone ClpB [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409981861|gb|EKO38376.1| ATP-dependent chaperone ClpB [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 866
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/866 (52%), Positives = 616/866 (71%), Gaps = 37/866 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ +AI A +A G Q HL ALL+ G+ + ++ AG + A
Sbjct: 1 MDLNKFTQKSQQAIGEAQAVAVRMGQQQVDAEHLLYALLTQDQGLVPRILDKAGYNSQAY 60
Query: 61 SAERVFNQAMKKLPSQT-PA--PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
AE + + +LP + P P ++ + L +++ + Q + D +++V+ L L
Sbjct: 61 LAE--LERGLSRLPKVSGPGVQPGQVYVTPRLNEILVKGQDLARHLKDEYVSVEHLFLAF 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
++ + G + K G+ R+ + + ++RG G++V SA + T++AL YGRDLV+
Sbjct: 119 CDEPPSTLAGQVNKALGIDKNRILAALTEIRG--GQRVTSADPEATYEALTKYGRDLVDA 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GK+DPVIGRDEEIRRV+RILSRRTKNNPV+IGE GVGKTA+VEGLA RIV DVP
Sbjct: 177 AKKGKIDPVIGRDEEIRRVIRILSRRTKNNPVVIGEAGVGKTAIVEGLAMRIVNKDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L + + ALDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG+VILFIDE+H ++GAG+TEG
Sbjct: 237 LKEKTIFALDMGALIAGAKYRGEFEERLKAVLKEVQSSEGRVILFIDELHTIVGAGKTEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA NL KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V+V EP+V DT+SILR
Sbjct: 297 SMDAGNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVFVDEPTVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGVRI D +LV AA LS RY+ R LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLRERFEVHHGVRINDSSLVEAAVLSQRYLPDRQLPDKAIDLIDEAAAMIRTEIDSLPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK MQLEIE AL +E DKAS+ RL ++ +EL +L++ M +++KEK ++
Sbjct: 417 LDQINRKVMQLEIEREALRRETDKASRERLEKLEEELANLKEDQAGFMTQWEKEKGAVEV 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEV-------EAAIGQLEGNQSDEN 525
+RR+K+ E+ A+++AER YDL +AA+LRYG + + E AI + G
Sbjct: 477 LRRIKEDIEKTKLAIEDAERAYDLNKAAELRYGRLAGLERDLVGQETAIAKAAGGTR--- 533
Query: 526 LMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESV 574
++ E V PD IA V+SRWTGIPVTRL ++E+E R++G EAV AVA++V
Sbjct: 534 -LIREEVTPDDIAMVISRWTGIPVTRLLESEREKLLRLGDVLHDRVVGQDEAVTAVADAV 592
Query: 575 LRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVS 634
LR+RAGL P +P GSF+FLGPTGVGKTEL K LA LFD E+ +VR+DMSEYME+H+V+
Sbjct: 593 LRARAGLKDPGRPIGSFIFLGPTGVGKTELCKTLAAALFDTEDNIVRLDMSEYMERHTVA 652
Query: 635 RLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQG 694
RLIGAPPGY+G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQ+LDDGRLTD G
Sbjct: 653 RLIGAPPGYIGYDEGGQLTEAVRRKPYSVVLFDEIEKAHSDVFNTLLQILDDGRLTDSHG 712
Query: 695 RTVDFRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIV 752
RTVDF+NT+IIMTSNLGA+++L G++ G+ V+ + V+ +R HFRPE LNR+DEIV
Sbjct: 713 RTVDFKNTIIIMTSNLGAQYMLDGILPSGQFKEGVS-ESVMNTLRGHFRPEFLNRVDEIV 771
Query: 753 VFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWL 812
+F PL EQ+ + L + + RLA+R ++L +TD A + +YDP++GARP+RR+L
Sbjct: 772 LFKPLLREQIAAIVELMLGGLRARLADRKISLTLTDTAKAFIAETAYDPVFGARPLRRYL 831
Query: 813 EKKVVTELSRMLVREEIDENSTVYID 838
+ + T L++ L+ ++ + V +D
Sbjct: 832 QAHIETPLAKALIGGQVADGQAVAVD 857
>gi|188581554|ref|YP_001924999.1| ATP-dependent chaperone ClpB [Methylobacterium populi BJ001]
gi|179345052|gb|ACB80464.1| ATP-dependent chaperone ClpB [Methylobacterium populi BJ001]
Length = 874
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/861 (53%), Positives = 601/861 (69%), Gaps = 23/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + + A LA G+ Q P HL LL DP G+ A I+ AGG++
Sbjct: 1 MNFEKYTERARGFVQAAQNLAVREGNPQLAPGHLLKVLLDDPEGLCAGLIDRAGGQSRVA 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A+ Q + K P + + A+ L+++ A+ A + GD+++ V++L+L
Sbjct: 61 HAQ--VEQWLAKQPKVSGNAAQPQATRELVRLFDTAEQAAEKAGDSYVTVERLLLAFAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+DS+ G + AGV A + + + LR +GR ++AS + + ALK Y RDL E A G
Sbjct: 119 KDSEGGRILTAAGVTAASLNAAINALR--KGRTADNASAENAYDALKKYARDLTEAAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L +
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKEK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
L+ALDMGAL+AGAKYRGEFEERLK VL EV AEG++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 NLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGQIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+DN+
Sbjct: 357 KYEQHHGVRIQDSALVAAATLSNRYITDRFLPDKAIDLVDEAGSRLRMQVDSKPEELDNV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ ++L+IE AL+KE D AS+ RL + KEL DL ++ + R+K EK+++ L
Sbjct: 417 DREIVRLKIEGEALKKETDSASRDRLQRLEKELADLEEQSATITARWKAEKDKLGAAAEL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI---GQLEGNQSDENLMLTETVG 533
K+K +E L A+R+ RA +L YG I +E + + + M+ E V
Sbjct: 477 KKKLDEARNELASAQRQGQYQRAGELAYGVIPGLEKQLAEIEAAAESAVARDGMVEEAVT 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
P IA VVSRWTG+PV ++ + E+E R++G EAV AV+ +V R+RAGL
Sbjct: 537 PAHIAGVVSRWTGVPVDKMLEGEREKLLAMEEALGKRVVGQREAVEAVSTAVRRARAGLQ 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTEL KALA LFDD+ LVRIDMSEYME+H+V+RLIGAPPG
Sbjct: 597 DPNRPIGSFMFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVARLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 657 YVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++IMTSNLGAE+L++ G+ T V RD+V+ VR HFRPE LNR+DEI++F L+ ++
Sbjct: 717 LLIMTSNLGAEYLVNQPAGQDTDAV-RDEVMGVVRSHFRPEFLNRVDEIILFHRLARSEM 775
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ +A L +R ++L V D A + + YDP YGARP++R ++K V L+
Sbjct: 776 GAIVDIQLGRLAKLLEDRKISLDVDDEARTWLADKGYDPAYGARPLKRVIQKNVQDPLAE 835
Query: 823 MLVREEIDENSTVYIDASPKG 843
++ I + TV + P G
Sbjct: 836 AILSGVIHDGETVPVRVGPAG 856
>gi|427724530|ref|YP_007071807.1| ATP-dependent chaperone ClpB [Leptolyngbya sp. PCC 7376]
gi|427356250|gb|AFY38973.1| ATP-dependent chaperone ClpB [Leptolyngbya sp. PCC 7376]
Length = 864
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/854 (51%), Positives = 611/854 (71%), Gaps = 23/854 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K +AIA ++A Q HL ALL G A++I + +
Sbjct: 5 NPNQFTEKAWQAIAQTPDIAKHNQQQQLESEHLMQALLE--QGGLAKSIFTKAEISLPRL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + + P + + + +L ++ RA +K+ GD ++V+ LIL D
Sbjct: 63 RDRT-DSFITTQPKISKPSESVYLGRSLDTLLDRADNHKKSFGDEFISVEHLILSYARDD 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G +++E G+ ++K ++++RG + KV + + +++L+ YGRDL E A GKL
Sbjct: 122 RFGKKIYQEFGLTENKLKEIIKQIRGNQ--KVTDQNPEGKYESLEKYGRDLTELARNGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV DVP +L D L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNRDVPESLKDRTL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMG+L+AGAKYRGEFEERLKAVLKEV ++EG+VILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGSLIAGAKYRGEFEERLKAVLKEVTDSEGQVILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ V + EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQSVMINEPTVIDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDE+ A +++++ S+PEE+D ++R
Sbjct: 360 ELHHGVKIADTALVAAAMLSNRYISDRFLPDKAIDLVDESAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QL++E +L+KE D AS RL ++ KEL DL++ L +++ EKE ID+IR +K+
Sbjct: 420 KILQLKMEQISLKKESDAASVERLAKLEKELADLQEDQSHLNAQWQSEKEVIDKIRHIKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL----MLTETVGP 534
+ + +++AER YDL +AA+LRYG + +++ + +E S++ + +L E V
Sbjct: 480 EIDATNLEIEQAERGYDLNKAAELRYGKLAQLQQQVKDIEAKLSEQQVSGDSLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L IG EAV AV+E++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLIESEKEKLLHLEDELHQRVIGQEEAVTAVSEAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA+ LFD E LVRIDMSEYME+H+VSRL+GAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALAQFLFDTEEALVRIDMSEYMEKHAVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QGRTVDF+NTV
Sbjct: 660 VGYEEGGQLTEAIRRRPYSVILFDEIEKAHADVFNVMLQILDDGRLTDSQGRTVDFKNTV 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G+ +L + R +V++ + FRPE LNR+DE+++F L +QLR
Sbjct: 720 IIMTSNIGSNFILDVAGDDSRYEEMRSRVMEAMTASFRPEFLNRIDELIIFHGLKKDQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ+ +A RLAE+ + + ++D A + V YDP+YGARP++R ++K V T +++
Sbjct: 780 EIVKLQINGLAGRLAEQKLGIELSDEAYNFVADIGYDPVYGARPLKRAVQKYVETAIAKG 839
Query: 824 LVREEIDENSTVYI 837
+++ E T+ +
Sbjct: 840 ILKGEFVSGETIKV 853
>gi|425450141|ref|ZP_18829973.1| Chaperone [Microcystis aeruginosa PCC 7941]
gi|389769125|emb|CCI05925.1| Chaperone [Microcystis aeruginosa PCC 7941]
Length = 872
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/857 (51%), Positives = 613/857 (71%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP +FT K EAI ++A Q HL ALL A ++ + + A+
Sbjct: 5 NPQQFTEKAWEAIVKTPDIAKQNSQQQIESEHLMKALLEQEG--LAGSVFSKANISLARL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + ++ P + D I +L ++ RA+ ++ GD ++++ LILG +D
Sbjct: 63 RDRT-DDFIRSQPKISNPGDSIYLGRSLDSLLDRAENYRREFGDDFISIEHLILGYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G ++F+E G+ ++K ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGKNIFQEFGLTENKLKEIIQQVRGSQ--KVTDQNPEGKYEALEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLLDRTL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LD+G L+AGAKYRGEFEERLKAVLKEV +++G +I+FIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDLGGLIAGAKYRGEFEERLKAVLKEVTDSQGNIIMFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADNALVAAALLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L++E D AS+ RL ++ KEL +L+++ L +++ EKE ID++R +K+
Sbjct: 420 KILQLEMERLSLQREYDPASRERLEKLEKELANLKEEQSGLNAQWQGEKEIIDKVRGVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL----MLTETVGP 534
E++ +Q+AER YD RAA+L++G + ++ + LE +D+ +L E V
Sbjct: 480 AIEQVNLEIQQAERDYDYNRAAELKFGKLTNLQRQMSALETQLADKQTTGKSLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+ +L ++EKE+L IG EAV AVAE++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPLNKLIESEKEKLLNLEDELHESVIGQEEAVTAVAEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E LVRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHSVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDSQGHLVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + + +V++ +R FRPE LNR+DE ++F L QLR
Sbjct: 720 IIMTSNIGSQYILDVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDETIIFHSLQKAQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ +++ RL E+ +AL + D ALD + YDP+YGARP++R +++ V T +++
Sbjct: 780 SIVKLQTANLSDRLMEQKLALKLADIALDYLAEIGYDPVYGARPLKRAVQRYVETPIAKA 839
Query: 824 LVREEIDENSTVYIDAS 840
++R E T+++D +
Sbjct: 840 ILRGEFKGGDTIFVDVA 856
>gi|404491926|ref|YP_006716032.1| ATP-dependent chaperone ClpB [Pelobacter carbinolicus DSM 2380]
gi|77544057|gb|ABA87619.1| ATP-dependent chaperone ClpB [Pelobacter carbinolicus DSM 2380]
Length = 872
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/862 (52%), Positives = 625/862 (72%), Gaps = 29/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGI---FAQAINNAGGEN 57
M+ +K T KT EA+ A ++A GH + HL ALL G+ Q ++ G
Sbjct: 1 MDINKMTQKTQEALQAAQDIALKRGHVEVDGEHLLAALLEQEGGLVPRLLQKMDVQVGNL 60
Query: 58 AAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
AA + + +A P ++ + L +++ +A+ + D +++V+ L+L +
Sbjct: 61 AAAVKKELDRRASVSGPGVEGG--KVYVTQRLNRLLLKAEEEARHLRDDYVSVEHLLLAM 118
Query: 118 L---EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE- 173
+ + + +G LFK+ + R+ + +RG + +V S ++T++AL+ YGRDLV+
Sbjct: 119 VGEGDATALGKLFKQFNIHRDRLLEALTAIRGHQ--RVTSPEPESTYEALEKYGRDLVQE 176
Query: 174 -QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
Q GKLDPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLA RIVRGDVP
Sbjct: 177 VQKGKLDPVIGRDAEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAHRIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L + + ALDMGALVAGAK+RGEFEERLKAVL E+ +EG+++LFIDE+H ++GAG+ EG
Sbjct: 237 LKNKTVFALDMGALVAGAKFRGEFEERLKAVLNEIRSSEGRILLFIDELHTIVGAGKAEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA N+ KPMLARG+L CIGATTL+EYRKY+EKDAA ERRFQ V V +P+V DT+SILR
Sbjct: 297 SMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDAALERRFQPVVVDQPTVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HGVRIQD ALV +A LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 357 GLKERFEVFHGVRIQDNALVASAILSNRYISDRFLPDKAIDLVDEACATIRTEIDSLPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL+KEKD AS+ARL +RKEL DL+ + L ++ KEK I
Sbjct: 417 LDEVTRRVMQLEIEEAALKKEKDAASQARLETLRKELADLKHQADVLTAQWDKEKGAIKG 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN---LMLT 529
++ L+++ E++ ++ AER YDL RAA+L++G + E+E + + E + +DE +L
Sbjct: 477 VQGLREQIEQVRQQIEVAERNYDLNRAAELKHGQLPELERRLHEQEHDSADETGGARLLR 536
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSR 578
E V ++IAE++SRWTGIPVTRL + E+E R++G EAV VA++V+R+R
Sbjct: 537 EEVTEEEIAEIISRWTGIPVTRLVEGEREKLLKLDEVLHRRVVGQDEAVQLVADAVIRAR 596
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P++P GSF+FLGPTGVGKTELA+ LAE LFD E+ +VRIDMSEYME+H+VSRLIG
Sbjct: 597 AGIKDPRRPIGSFIFLGPTGVGKTELARTLAEALFDSEDNMVRIDMSEYMEKHTVSRLIG 656
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGR+TD QGRT+D
Sbjct: 657 APPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHHDVFNVLLQILDDGRVTDAQGRTID 716
Query: 699 FRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
F+NTVII+TSN+G++HLL G+ G++ + + V+ E+R HFRPE LNR+D+IV+F P
Sbjct: 717 FKNTVIILTSNIGSQHLLEGVSPEGEIREEAGK-AVMNELRHHFRPEFLNRVDDIVMFKP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
LS E+++++ L D+ RLA+R + L +T+AA D + E+YDP++GARP++R+L+ +
Sbjct: 776 LSREEIKQIIHLLAADLRKRLADRRIELELTEAACDFIAGEAYDPVFGARPLKRYLQHHL 835
Query: 817 VTELSRMLVREEIDENSTVYID 838
T + R L+ +I E +T+ +D
Sbjct: 836 ETRIGRALIGGDIHEGATIAVD 857
>gi|265993630|ref|ZP_06106187.1| chaperone protein clpB [Brucella melitensis bv. 3 str. Ether]
gi|262764611|gb|EEZ10532.1| chaperone protein clpB [Brucella melitensis bv. 3 str. Ether]
Length = 874
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/864 (52%), Positives = 602/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAAMLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E R++G EAV A++++V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSR IGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRFIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQG TVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGHTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 835 LGDILDGSLVKITAG--SDRLNFR 856
>gi|392597408|gb|EIW86730.1| hypothetical protein CONPUDRAFT_78978 [Coniophora puteana
RWD-64-598 SS2]
Length = 905
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/873 (52%), Positives = 608/873 (69%), Gaps = 43/873 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSG---------------I 45
MN D FT++ E +A A +LA +AQ P+H+A ALL+D +
Sbjct: 1 MNAD-FTNRAQETLAAAIQLAKDYSNAQVHPVHIAFALLNDSGAGNEVPGGLQSSSGSSL 59
Query: 46 FAQAINNAGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGD 105
F+ I+ AGG+ A +R + + +LP+Q+PAPDEI S+ KV+R AQ+ QK D
Sbjct: 60 FSSVISKAGGDPTA--VKRGLQRLLVRLPAQSPAPDEISLSSGAAKVLREAQSLQKTMHD 117
Query: 106 THLAVDQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALK 165
+++A D ++L L+ DS I + KEA + A +K+ +++ RG R++ES S + F AL
Sbjct: 118 SYVAQDHILLALIADSSIAPVLKEASLTEAALKTAIQQARGN--RRIESKSAEAGFDALS 175
Query: 166 TYGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQR 223
Y DL A GK+DPV+GRD EIRRV+RIL RRTKNNPVLIGEPGVGKT++ EGLAQR
Sbjct: 176 KYAVDLTALAEEGKIDPVVGRDNEIRRVIRILCRRTKNNPVLIGEPGVGKTSIAEGLAQR 235
Query: 224 IVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEA--EGK-VILFIDE 280
IV DVP++L RL +LDMGAL+AGAKY+GE+EER+K+VL EVE++ EG VILFIDE
Sbjct: 236 IVNRDVPASLIG-RLFSLDMGALMAGAKYKGEYEERIKSVLNEVEKSSEEGTTVILFIDE 294
Query: 281 IHLVL-GAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYV 339
+HL++ G+G G MDAANLFKP+LARG+LRCIGATTL EYRKY+EKDAAFERRF QV V
Sbjct: 295 LHLIMAGSGSEGGGMDAANLFKPLLARGKLRCIGATTLAEYRKYIEKDAAFERRFAQVLV 354
Query: 340 AEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEAC 399
EPSV +T++ILRG++EKYE HHGVRI D AL+ AA L+ RY+T R LPD AIDLVDEAC
Sbjct: 355 NEPSVSETINILRGIREKYEVHHGVRILDGALISAATLAHRYLTSRRLPDSAIDLVDEAC 414
Query: 400 ANVRVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPL 459
A+VRV ++ PEEID L+R++++LE+E+HALE+EKD+ASK RL RK + ++ D+L+PL
Sbjct: 415 ASVRVTRETDPEEIDKLQRRKLELEVEVHALEREKDQASKDRLATARKAIAEVEDQLRPL 474
Query: 460 MMRYKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG 519
Y+ EK R +EI +++K +EL EAERRYDLA A+DLRY AI +++A + LE
Sbjct: 475 KAAYEAEKSRGNEINEVRRKIDELRAKADEAERRYDLATASDLRYYAIPDLQARLKDLES 534
Query: 520 NQSDENL----MLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLA 564
+ E+ +TV P+QIAE+V RWT IPVTRL EKE+L +G
Sbjct: 535 RRVQEDAENENSSADTVTPEQIAEIVGRWTSIPVTRLMSTEKEKLLRLERVLADSVVGQP 594
Query: 565 EAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDM 624
EAV AVA ++ SR+GL Q+P SFL GP+G GKT L+K LA LFD + ++R+D
Sbjct: 595 EAVRAVANAIRLSRSGLANAQRPIASFLMAGPSGTGKTLLSKTLATILFDSPDAMIRVDG 654
Query: 625 SEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVL 684
SEY E+HS++RLIGAPPGYVGH+ GGQLTE VRR+PY +VL DE+EKA LQVL
Sbjct: 655 SEYSEKHSIARLIGAPPGYVGHDAGGQLTEYVRRKPYCIVLIDEIEKASREFVTLFLQVL 714
Query: 685 DDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPEL 744
DDGRLTDGQGR VDFRNTVIIMTSNLGA +L G V Q R+ V+ ++ HF PE
Sbjct: 715 DDGRLTDGQGRVVDFRNTVIIMTSNLGAAYLNDMGQGPVNAQT-RELVMGAIQGHFPPEF 773
Query: 745 LNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYG 804
+NR+DEIV+F LS + K+ +++K++ RLA+R + LAV + A + + Y P YG
Sbjct: 774 INRIDEIVIFRTLSRNNVLKIVDVRLKEIQERLADRKITLAVDETAKQFLSSVGYSPTYG 833
Query: 805 ARPIRRWLEKKVVTELSRMLVREEIDENSTVYI 837
ARP+ R ++ +++ LS M++ E++ + TV +
Sbjct: 834 ARPLNRAIQSELLNPLSVMILSEQVMDGETVRV 866
>gi|56419334|ref|YP_146652.1| ATP-dependent Clp protease ATP-binding subunit [Geobacillus
kaustophilus HTA426]
gi|56379176|dbj|BAD75084.1| ATP-dependent Clp protease ATP-binding subunit [Geobacillus
kaustophilus HTA426]
Length = 862
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/856 (53%), Positives = 609/856 (71%), Gaps = 22/856 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ + T K EA+ A LA H Q HL +ALL G+ + G + A
Sbjct: 1 MDASRLTEKLQEALMAAQSLAKERHHQQLDVEHLLLALLEQEDGLAPRLFALCGADRA-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
A R +++ P A + ++ + L +++ A+ K D +++V+ ++L L
Sbjct: 59 QAIRWLQDRIRQKPEVHGAGEGQMYVAPALARLLEGAENEAKRMQDEYISVEHVLLALSH 118
Query: 120 DSQ-IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
++ + G+ + V K+RG + +V S + T++AL YGRDLV +A G
Sbjct: 119 GAEPVAQQLASFGLTEEALVEAVRKVRGNQ--RVTSPHPEATYEALTKYGRDLVAEAKAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L D
Sbjct: 177 KIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPDGLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ ALDM ALVAGAK+RGEFEERL+AVL E++++EG++ILFIDE+H ++GAGR EG++DA
Sbjct: 237 TIFALDMSALVAGAKFRGEFEERLRAVLNEIKKSEGRIILFIDELHTIVGAGRAEGAIDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LRCIGATTL+EYR+Y+EKD A ERRFQQV V EP+V DT+SILRGLKE
Sbjct: 297 GNMLKPMLARGELRCIGATTLDEYRQYIEKDPALERRFQQVLVQEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGV+I DRALV AA LS RYI+ R LPDKAIDLVDEACA +R +++S P E+D +
Sbjct: 357 RYEVHHGVKIHDRALVAAAVLSDRYISDRFLPDKAIDLVDEACATIRTEMESMPSELDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
R+ MQLEIE AL KE D+AS+ RL ++KEL DLR+K + +++KEKE +D +RRL
Sbjct: 417 MRRVMQLEIEEAALSKETDEASRERLAALQKELADLREKANAMKAQWQKEKEALDRVRRL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD--ENLMLTETVGP 534
++ E L+EAE YDL +AA+LR+G I ++E + QLE S+ E +L E V
Sbjct: 477 REALERAKRELEEAENEYDLNKAAELRHGRIPQLEKQLKQLEQEISEQSEGKLLREEVTE 536
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKER-----------LIGLAEAVNAVAESVLRSRAGLGR 583
++IAE+VSRWTGIP+TRL + E+E+ +IG EAV VA+++LR+RAG+
Sbjct: 537 EEIAEIVSRWTGIPLTRLVEGEREKLLRLHELLHRRVIGQDEAVELVADAILRARAGMKD 596
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAKALAE LFD E L+R+DMSEYME+H+VSRLIGAPPGY
Sbjct: 597 PNRPIGSFLFLGPTGVGKTELAKALAEALFDSEEQLIRLDMSEYMEKHAVSRLIGAPPGY 656
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGRLTD GRTVDF+NTV
Sbjct: 657 VGYEEGGQLTEAVRRKPYSVLLFDEIEKAHSDVFNILLQLLDDGRLTDSHGRTVDFKNTV 716
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSN+G+ LL + Q R QV ++R HFRPE LNR+D+IV+F PLS +++
Sbjct: 717 VIMTSNIGSPLLLEHKDDDIDEQT-RSQVFDQLRAHFRPEFLNRIDDIVLFKPLSMNEVK 775
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ ++++ RLA+R + L +T+AA + +DP+YGARP++R+++K++ T L++
Sbjct: 776 GIIEKFARELSARLADRHIELVLTEAAKQYIAEAGFDPVYGARPLKRFMQKQIETPLAKE 835
Query: 824 LVREEIDENSTVYIDA 839
L+ + + STV +DA
Sbjct: 836 LIAGRVKDYSTVTVDA 851
>gi|399266|sp|P31543.1|CLP_TRYBB RecName: Full=Heat shock protein 100; AltName: Full=Protein CLP
gi|162025|gb|AAA30173.1| Clp protein [Trypanosoma brucei]
gi|2408130|emb|CAA03906.1| heat shock protein 100 [Trypanosoma brucei]
gi|6249543|emb|CAB60084.1| heat shock protein 100 [Trypanosoma brucei]
Length = 868
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/865 (53%), Positives = 604/865 (69%), Gaps = 28/865 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENAAQSA 62
+ T+ A++ A E A + P HLA+ L + G+ ++ + NAG +A
Sbjct: 7 QCTNAAQTALSDAVESARKHNNGFVDPAHLALVLFKNEDGLASRVLRKLNAGTVLEPLAA 66
Query: 63 ERVFNQAMKKLPSQTPAPDEIPASTTL-IKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ LP Q P P I S+ RRA+A + GD+ +AVD L++GL E
Sbjct: 67 R------VGALPEQRPRPRSITFSSDGGCAQHRRAEANRV--GDSLIAVDHLLIGLFECK 118
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
++ + K A + V+ + +LR +G+KV S + +QAL+ Y DL + A GKLD
Sbjct: 119 EVEAIMKAAHASKKAVEGALLELR--KGKKVTSEFQEENYQALEKYATDLCKLAEEGKLD 176
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGR +E+ R +R+LSRRTKNNP+LIGEPGVGKTA+ EG+AQRIVRGDVP L + RL
Sbjct: 177 PVIGRTDEVLRTIRVLSRRTKNNPILIGEPGVGKTAIAEGIAQRIVRGDVPDTLLNTRLF 236
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+GAL+AG+ RGEFEERLK+VL EV+E+ VILFIDEIHLVLGAG++ GSMDAANL
Sbjct: 237 SLDLGALIAGSSLRGEFEERLKSVLNEVKESSNGVILFIDEIHLVLGAGKSGGSMDAANL 296
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTLEEYR YVEKDAAFERRF VYV EPSV + +SILRGLK++YE
Sbjct: 297 LKPMLARGELRTIGATTLEEYRTYVEKDAAFERRFMPVYVTEPSVEECISILRGLKDRYE 356
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HHGV+I D A+VVAAQL+ RYIT R +PDKAIDL+DEACANVRVQL S+PE ID LERK
Sbjct: 357 AHHGVQITDNAVVVAAQLANRYITNRFMPDKAIDLIDEACANVRVQLSSRPEAIDILERK 416
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+ QLEIE ALE++K+ AS+ RL V+ ++ + ++LQPL+ +Y E++RIDE++ ++ +
Sbjct: 417 KRQLEIEAKALERDKEAASRERLKLVKADIQRVEEELQPLVSKYNDERQRIDELQEMQSR 476
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL-EGNQSDENLMLTETVGPDQIA 538
+E L+ A R + AADL+Y I ++ I L E + + ++ E V +A
Sbjct: 477 LDEKK-KLERAVRDGKMDLAADLQYNVIPLIQDRIRSLKEDIERQKATLVQEKVTEGDVA 535
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
VV+RWTGIPV +L Q ++ERL+ L+ EAV VA++++R+RAGL RP P
Sbjct: 536 AVVARWTGIPVVKLSQTDRERLLNLSMHLHRRVKGQDEAVERVADAIIRARAGLSRPNSP 595
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
T SFLFLGPTGVGKTEL KA+A +LFDDE +VRIDMSEYMEQHSVSRLIGAPPGY+GH+
Sbjct: 596 TASFLFLGPTGVGKTELVKAVAAELFDDEKHMVRIDMSEYMEQHSVSRLIGAPPGYIGHD 655
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRP++VVLFDEVEKAH +V+N LLQVLDDGRLTD +GRTVDF NT+I+MT
Sbjct: 656 EGGQLTEPVRRRPHAVVLFDEVEKAHPNVYNVLLQVLDDGRLTDSRGRTVDFSNTIIVMT 715
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLG+EHLL+ + +V R+ VL VR +FRPEL+NRLD+IVVF L E LR V
Sbjct: 716 SNLGSEHLLNPEETNESYEVLRENVLAAVRSYFRPELINRLDDIVVFRRLRTEDLRGVVD 775
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
+ V RL G ++ + D D +L +D GARP+RRW+EK +VTE+ RML+ +
Sbjct: 776 NLIAGVNERLKSSGFSVLLDDGVKDFILEHGHDANMGARPLRRWIEKNIVTEIGRMLIAK 835
Query: 828 EIDENSTVYIDASPKGDNLVYRVQK 852
E+ NST+ + G+ L + V++
Sbjct: 836 ELPPNSTLRVSLPEGGNKLTFGVKR 860
>gi|172056511|ref|YP_001812971.1| ATP-dependent chaperone ClpB [Exiguobacterium sibiricum 255-15]
gi|171989032|gb|ACB59954.1| ATP-dependent chaperone ClpB [Exiguobacterium sibiricum 255-15]
Length = 857
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/868 (52%), Positives = 617/868 (71%), Gaps = 30/868 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T + +EAI A +A H++ T HL +ALLS GI A+ + + Q
Sbjct: 1 MDFEKLTDRAHEAIVSAQAIAKQRRHSEITEWHLLLALLSQEEGI-ARIVFEKLDQRIDQ 59
Query: 61 SAERVFNQAMKKLPS--QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
E N+A+ +LP+ Q+ P S +L++V+ A+ + D +++V+ L+LGL+
Sbjct: 60 -LETGVNEALGRLPALGQSSTP---RISNSLLQVLTEAETEARLMQDDYVSVEHLLLGLV 115
Query: 119 EDSQIGDLF-KEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QA 175
+ S + + GV ++ + ++RG RKV + + + TF LK YGRDLV ++
Sbjct: 116 KQSSPATQYLRNEGVTEQVLREAIIEMRG--NRKVTTKNPEATFDVLKKYGRDLVADFRS 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GK DPVIGRD+EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP +L +
Sbjct: 174 GKTDPVIGRDDEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPESLKN 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L +LDM LVAGAKYRGEFEERL+AVL EV+EAEG+++LFIDE+H ++GAG+TEG+MD
Sbjct: 234 KQLFSLDMSTLVAGAKYRGEFEERLQAVLNEVKEAEGQILLFIDELHTIVGAGKTEGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV VAEP V DT+SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLVAEPDVEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E++E HHGVRI D ALV AA LS RYIT R +PDKAIDLVDEACA +R ++S P E+D+
Sbjct: 354 ERFEIHHGVRIHDNALVAAAILSDRYITDRFMPDKAIDLVDEACAMIRTDMESMPAELDS 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L R+ MQLEIE AL+KE D+AS+ RL +++EL +R+ L R+++EK+ +++
Sbjct: 414 LVRRVMQLEIEEAALKKETDEASRKRLETLQQELSSVREDESALRTRWEREKDSSQNVQQ 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL---MLTETV 532
L+ E+ ALQEAE RYDL A++++YG I +E + E +S E++ ++ E V
Sbjct: 474 LRADLEKAKLALQEAEGRYDLNTASEIKYGQIPALENQLKVAE--ESAEHVAHELVREAV 531
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSRAGL 581
++I+++VS+WTGIPV+RL Q E+E+L+ G EAV V+++V+R+RAG+
Sbjct: 532 TDEEISDIVSKWTGIPVSRLAQGEREKLLYLEDTLHERVFGQDEAVRLVSDAVIRARAGI 591
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTELAKALA +FD E +VRIDMSEYME+H+VSRL+GAPP
Sbjct: 592 KDPNRPIGSFLFLGPTGVGKTELAKALAAAMFDSEEHIVRIDMSEYMEKHNVSRLVGAPP 651
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR PYSV+LFDE+EKAH VFN LLQVLDDGRLTD QGR VDF+N
Sbjct: 652 GYVGYEEGGQLTEAVRRSPYSVLLFDEIEKAHGDVFNILLQVLDDGRLTDAQGRVVDFKN 711
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T++IMTSN+G+ LL + V QE++K+FRPE LNR+D+ ++F PL +
Sbjct: 712 TIVIMTSNIGSHILLEAAKDGDIDAAEEEAVRQELKKYFRPEFLNRIDDTILFHPLHRAE 771
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++ + +A RL+ R + + VT+AA ++ E+++P YGARPI R++++ + T+L+
Sbjct: 772 IERIIDKAVSKMAERLSGREITIDVTEAAKTLIFNEAFEPQYGARPINRYIQRTIETKLA 831
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYR 849
R L+ I + S V ID G LV R
Sbjct: 832 RALISGSIQDGSHVAIDTD--GTELVIR 857
>gi|374300603|ref|YP_005052242.1| ATP-dependent chaperone ClpB [Desulfovibrio africanus str. Walvis
Bay]
gi|332553539|gb|EGJ50583.1| ATP-dependent chaperone ClpB [Desulfovibrio africanus str. Walvis
Bay]
Length = 888
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/872 (51%), Positives = 623/872 (71%), Gaps = 28/872 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ +A+A A A GH Q HL +AL+ +G+ ++ AG + A
Sbjct: 1 MDMNKFTQKSRDAVAEAQAEAVRLGHQQIDAEHLLLALVRQENGLVPNLLSKAGYDPEAY 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ + ++++P + P ++ + L +V+ +AQ + D +++V+ + L L
Sbjct: 61 A--KAVQDELERMPKVSGPGAQPGQVFVTQRLNQVLVKAQDLARQMSDEYMSVEHIFLTL 118
Query: 118 LEDSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
++ + +G + G+ ++ + + ++RGK+ +V S + + T+ ALK YGRDLVE+
Sbjct: 119 ADEPKTTGVGKVNARFGLTRDKILTVLTEVRGKQ--RVTSDNPEETYDALKKYGRDLVEE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRR +RILSRRTKNNPVLIG+ GVGKTA+VEGLAQRI++ DVP
Sbjct: 177 ARKGKLDPVIGRDAEIRRAIRILSRRTKNNPVLIGDAGVGKTAIVEGLAQRILKQDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + +LDMGAL+AGAKYRGEFEERLKAVLKEV ++EG+VILFIDEIH ++GAG+ EG
Sbjct: 237 LKDKTIFSLDMGALIAGAKYRGEFEERLKAVLKEVGQSEGRVILFIDEIHTIVGAGKAEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATT++EYRK +EKD A ERRFQ + V EPSV DT+SILR
Sbjct: 297 AMDAGNLLKPMLARGELHCIGATTVDEYRKNIEKDPALERRFQPILVDEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGVRI D ALV A+ LS RY+T R LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLRERFEVHHGVRIADAALVDASVLSNRYLTDRQLPDKAIDLIDEAAAMIRTEIDSMPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ +Q+EIE AL +E D S+ RL + +EL DL+++ LM +++KEK ++
Sbjct: 417 LDEINRRVLQMEIEREALRRETDPKSRERLEVLERELADLKERQSVLMAQWEKEKGAVER 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLMLTE 530
+R++K+ E ++EAER D RAA+LRY + +E + +E + M+ E
Sbjct: 477 MRQVKEDIERTRREVEEAERSLDYNRAAELRYSKLHALEKQLAAMEQATDGGKGARMVRE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRA 579
VGPD +AE++SRW+GIP++RL G+ EK ER+IG EAV+AVA++VLR+RA
Sbjct: 537 EVGPDDVAEIISRWSGIPISRLMEGEREKLMRLPEELHERVIGQEEAVDAVADAVLRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P GSF+FLGPTGVGKTEL K LA LFD E +VRIDMSEYME+H+V+RLIGA
Sbjct: 597 GLKDPARPIGSFIFLGPTGVGKTELCKTLAAALFDSEENMVRIDMSEYMEKHTVARLIGA 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGRLTD +GRTVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHHDVFNVLLQILDDGRLTDSKGRTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVA-RDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NT++IMTSNLGAE++L G+ K + RD+V+ +R++FRPE LNR+DE+V+F PL
Sbjct: 717 KNTIVIMTSNLGAEYMLEGITPKGEFRDGVRDKVMDTLRRNFRPEFLNRVDEVVLFKPLL 776
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
EQL+++ LQ+ + RLA+R + L +TDAA V ESYDP+YGARP++R+L+ ++ T
Sbjct: 777 QEQLKQIIDLQLAGLRRRLADRKIELDMTDAAKSFVAEESYDPVYGARPLKRFLQSRLET 836
Query: 819 ELSRMLVREEIDENSTVYIDASPKGDNLVYRV 850
L+R L+ + + V +D + D LV++
Sbjct: 837 PLARELISGRLGDGQKVLVDV--RLDKLVFQT 866
>gi|425439209|ref|ZP_18819540.1| Chaperone [Microcystis aeruginosa PCC 9717]
gi|389714881|emb|CCI00598.1| Chaperone [Microcystis aeruginosa PCC 9717]
Length = 872
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/857 (51%), Positives = 616/857 (71%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP +FT K EAI ++A Q HL ALL A ++ + + A+
Sbjct: 5 NPQQFTEKAWEAIVKTPDIAKQNSQQQIESEHLMKALLEQEG--LAGSVFSKANISLARL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + +++ P + D I +L ++ RA+ ++ GD ++++ LILG +D
Sbjct: 63 RDRT-DDFIRRQPKISNPGDSIYLGRSLDSLLDRAENYRREFGDDFISIEHLILGYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G ++F+E G+ ++K ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGKNIFQEFGLTENKLKEIIQQVRGSQ--KVTDQNPEGKYEALEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLLDRTL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LD+G L+AGAKYRGEFEERLKAVLKEV +++G +I+FIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDLGGLIAGAKYRGEFEERLKAVLKEVTDSQGNIIMFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADNALVAAALLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L++E D AS+ RL ++ KEL +L+++ L +++ EKE ID++R +K+
Sbjct: 420 KILQLEMEKLSLQREYDPASRERLEKLEKELANLKEEQSGLNAQWQGEKEIIDKVRGVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL----MLTETVGP 534
E++ +Q+AER YD RAA+L++G + +++ + LE +D+ +L E V
Sbjct: 480 AIEQVNLEIQQAERDYDYNRAAELKFGKLTDLQRQMSALETQLADKQTTGKSLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+ +L ++EKE+L IG EAV AVAE++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPLNKLIESEKEKLLNLEDELHESVIGQEEAVTAVAEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E LVRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHSVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDSQGHLVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + + +V++ +R FRPE LNR+DE ++F L QLR
Sbjct: 720 IIMTSNIGSQYILDVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDETIIFHSLQKAQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ+ +++ RL E+ +AL + D ALD + +DP+YGARP++R +++ V T +++
Sbjct: 780 SIVKLQVANLSDRLMEQKLALKLADIALDYLAEIGHDPVYGARPLKRAVQRYVETPIAKA 839
Query: 824 LVREEIDENSTVYIDAS 840
++R E T+++D +
Sbjct: 840 ILRGEFKGGDTIFVDVA 856
>gi|433650994|ref|YP_007295996.1| ATP-dependent chaperone ClpB [Mycobacterium smegmatis JS623]
gi|433300771|gb|AGB26591.1| ATP-dependent chaperone ClpB [Mycobacterium smegmatis JS623]
Length = 874
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/852 (53%), Positives = 605/852 (71%), Gaps = 27/852 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K+ EA+A A +AT GH + HL +AL+ P G+ + ++ G + AA
Sbjct: 1 MDINKLTQKSQEALADAQSIATRMGHIEVDGEHLLMALIDQPEGLVPRLLDQTGADTAAL 60
Query: 61 SA--ERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A ER ++ K+ P ++ + L ++ A+ K D +++V+ L++ L
Sbjct: 61 RADLERELDR-RPKVSGPGATPGQVSVTRRLANLLGGAEREAKRLKDEYVSVEHLVIALA 119
Query: 119 ED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ- 174
E+ S G + V + + K+RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 120 EEGSASAAGRILASHNVTRDSFLTALTKVRGNQ--RVTSATPEGAYEALEKYGRDLVAEG 177
Query: 175 -AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
AGKLDPVIGRD EIRRV++ILSR+TKNNPVLIG+PGVGKTA++EGLAQRIVRGDVP L
Sbjct: 178 RAGKLDPVIGRDAEIRRVIQILSRKTKNNPVLIGDPGVGKTAIIEGLAQRIVRGDVPEGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + +LDMG+LVAGAKYRGEFEERL+AVL EV+ EG+++LF+DE+H V+GAG TEGS
Sbjct: 238 RDKTIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAGEGQILLFVDELHTVVGAGATEGS 297
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
+DA N+ KPMLARG+L IGATTL+EYRK++EKDAA ERRFQ V V EP V DT+SILRG
Sbjct: 298 LDAGNMLKPMLARGELHMIGATTLDEYRKHIEKDAALERRFQTVLVDEPDVEDTISILRG 357
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
L+E+ E HGV+IQD ALV AA LS RYIT R LPDKAIDLVDE CA +R ++DS P E+
Sbjct: 358 LRERLEVFHGVKIQDAALVAAATLSHRYITDRFLPDKAIDLVDEGCARLRTEIDSMPAEL 417
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D + R+ +LEIE AL KE D ASK+RL E+RKEL DLR + ++ E++ I +
Sbjct: 418 DEITRRVTRLEIEEAALAKETDPASKSRLEELRKELADLRAEADARHAQWDAERQAIRRV 477
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVE----AAIGQLEGNQSDENLMLT 529
+ L+ + E+L +EAER YDL RAA+LRYG I E+E AA QL Q E +L
Sbjct: 478 QELRGQLEQLRHDAEEAERNYDLNRAAELRYGQITELERKLQAAEEQLRSKQG-EKPLLR 536
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSR 578
E V D+IAE+V+ WTGIPV RL + E+ ER+IG EAV V+++V+R+R
Sbjct: 537 EVVTEDEIAEIVAAWTGIPVARLQEGEREKLLRLDEILHERVIGQDEAVQLVSDAVIRAR 596
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E+ +VR+DMSEY E+H+VSRL+G
Sbjct: 597 SGIRDPRRPIGSFIFLGPTGVGKTELAKTLAAALFDSEDNMVRLDMSEYQERHTVSRLVG 656
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFNTLLQVLDDGRLTD QGR VD
Sbjct: 657 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHADVFNTLLQVLDDGRLTDAQGRQVD 716
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
FRNTV+IMTSN+G+ HLL G+ ++ ARD+V+ E+R HFRPE LNR+D+IV+F PL
Sbjct: 717 FRNTVVIMTSNIGSHHLLDGVTADGEIKPDARDRVMAELRGHFRPEFLNRVDDIVLFTPL 776
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
S Q+ ++ LQ+ ++ RLA+R + L +T A ++ YDP+YGARP+RR++ +V
Sbjct: 777 SMPQIERIVALQLTELRDRLADRQIELDITPDARRMIAEHGYDPVYGARPLRRYIAHEVE 836
Query: 818 TELSRMLVREEI 829
T++ R L+R +I
Sbjct: 837 TKIGRALLRGDI 848
>gi|331696043|ref|YP_004332282.1| ATP-dependent chaperone ClpB [Pseudonocardia dioxanivorans CB1190]
gi|326950732|gb|AEA24429.1| ATP-dependent chaperone ClpB [Pseudonocardia dioxanivorans CB1190]
Length = 874
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/881 (51%), Positives = 623/881 (70%), Gaps = 37/881 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T K+ +A++ A +LAT AGH + HL ALL P G+ + + G + A
Sbjct: 1 MDLNRLTQKSQQALSDAQDLATRAGHTEVDGEHLLAALLDQPEGLVPRLLGEMGIDVRAL 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
++ + + + P T P P ++ + L V+ A + D +++V+ L++ L
Sbjct: 61 RSD--LEEELGRKPRTTRPGPQPGQVAVTQRLANVLDVADREARRMKDEYVSVEHLLVAL 118
Query: 118 LEDSQIGDLFKEAGVAVAR-------VKSEVEKLRGKEGRKVESASGDTTFQALKTYGRD 170
++ G AG +AR + + + ++RG + +V SA+ + ++AL YG D
Sbjct: 119 ADEGSAGG----AGRVLARHTVTREAILAALTRVRGNQ--RVTSATPEGAYEALTKYGMD 172
Query: 171 LVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD 228
LVE A G+LDPVIGRD EIRRVV+ILSR++KNNPVL+GEPGVGKTA+VEGLAQRIV GD
Sbjct: 173 LVESARSGRLDPVIGRDAEIRRVVQILSRKSKNNPVLLGEPGVGKTAIVEGLAQRIVDGD 232
Query: 229 VPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAG 288
VP L + + ALDMG LVAGAKYRGEFEERL+AVL EV+ AEG+++LF+DE+H V+GAG
Sbjct: 233 VPEGLRERTIFALDMGLLVAGAKYRGEFEERLQAVLSEVKAAEGRILLFVDELHNVVGAG 292
Query: 289 RTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTV 348
+EGSMDA N+ KPMLARG+L IGATTL EYR++VEKDAA ERRFQ V+V EP+V DTV
Sbjct: 293 ASEGSMDAGNMLKPMLARGELHMIGATTLTEYRQHVEKDAALERRFQPVFVDEPTVEDTV 352
Query: 349 SILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDS 408
SILRGL+E++E HGVRI D +L+ AA LS RY+T R LPDKAIDLVDEACA +R ++DS
Sbjct: 353 SILRGLRERFEVFHGVRILDGSLIAAATLSHRYLTDRFLPDKAIDLVDEACARLRTEIDS 412
Query: 409 QPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKE 468
P E+D + RK M+LEIE AL +E+D AS+ARL ++R+EL DLR + + ++ E++
Sbjct: 413 MPAELDEITRKVMRLEIEEAALAQEEDAASRARLDQLRRELADLRGEADAMRAQWNAERQ 472
Query: 469 RIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDEN 525
I ++ L+ + E++ +Q+AER YDL RAA+LR+ ++E + E + E+
Sbjct: 473 AIKRVQELRAQLEQVRHDIQDAERAYDLNRAAELRFTRQADLERKLEAEERRLAEKQGEH 532
Query: 526 LMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESV 574
+L E V ++IAE+VS WTGIPV RL + E+E R++G EAV AVA+++
Sbjct: 533 RLLREVVTAEEIAEIVSVWTGIPVARLTEGEREKLLRLDEVLHRRVVGQDEAVQAVADAI 592
Query: 575 LRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVS 634
+R+R+G+ P++PTGSF+FLGPTGVGKTELAKALAE LFD E+ +VRIDMSEY E+H+VS
Sbjct: 593 IRARSGVKDPRRPTGSFIFLGPTGVGKTELAKALAEALFDSEDNIVRIDMSEYQERHTVS 652
Query: 635 RLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQG 694
RL+GAPPGYVG+EEGGQLTEAVRRRPY+VVLFDE+EKAH VFNTLLQVLDDGRLTD QG
Sbjct: 653 RLVGAPPGYVGYEEGGQLTEAVRRRPYAVVLFDEIEKAHPDVFNTLLQVLDDGRLTDAQG 712
Query: 695 RTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVV 753
RTVDFRNTVIIMTSN+G+++LL G+ ++ ARD V+ E+R HFRPE LNR+D+ V+
Sbjct: 713 RTVDFRNTVIIMTSNIGSQYLLDGVTDDGRLEPEARDLVMAELRAHFRPEFLNRVDDTVL 772
Query: 754 FDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLE 813
F PLS ++ + L + D+ +RLAER + + + D A + E YDP+YGARP+RR++
Sbjct: 773 FTPLSQGEIENIVELMLSDLRVRLAERNITVEIGDGARRFIAHEGYDPVYGARPLRRFIA 832
Query: 814 KKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKNG 854
++V T+++R L+R+ E ST+ +D D LV Q G
Sbjct: 833 REVETQVARALLRDGTIEGSTIRVDVG--DDRLVVTHQPVG 871
>gi|297204729|ref|ZP_06922126.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
gi|197710804|gb|EDY54838.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
Length = 879
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/862 (53%), Positives = 614/862 (71%), Gaps = 27/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T K+ EA+ A A GH + HL +ALL G+ + + +G E
Sbjct: 1 MDMNRLTQKSQEALQEAQSAAGRLGHTEVDGEHLLLALLDQEEGLIPRLLQQSGTEPEEL 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
A + + + P T AP ++ + L +++ A+ K D +++V+ L+L L
Sbjct: 61 RA--AVREELSRRPKVTGPGAAPGQVFVTQRLARLLDEAEREAKRLKDEYVSVEHLLLAL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ + G L KE GV + ++RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 119 AEEGSATAAGRLLKEHGVTRDSFLGALTQIRGNQ--RVTSANPEVAYEALEKYGRDLVAE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A G+LDPVIGRD EIRRV +ILSR++KNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP
Sbjct: 177 ARAGRLDPVIGRDAEIRRVTQILSRKSKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMG+LVAGAKYRGEFEERLKAVL EV+ A G+++LF+DE+H V+GAG EG
Sbjct: 237 LRDRTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAAGRILLFVDELHTVVGAGAAEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L IGATTL+EYRK++EKDAA ERRFQQV V EPSV DT+SILR
Sbjct: 297 AMDAGNMLKPMLARGELHMIGATTLDEYRKHIEKDAALERRFQQVLVDEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E+ E HGV+IQD +LV AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 357 GLRERLEVFHGVKIQDTSLVAAATLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ +LEIE AL KE D ASKARL E+R+EL DLR + +++ E++ I
Sbjct: 417 LDEITRRVTRLEIEDAALSKETDPASKARLEELRRELADLRGEADAKHAQWEAERQAIRR 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
++ L+Q+ E++ +EAER YDL RAA+LRYG +Q++E + E ++ +N +L
Sbjct: 477 VQELRQELEQVRHEAEEAERTYDLNRAAELRYGRLQDLERRLAAEEEQLASKQGQNRLLR 536
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSR 578
E V ++IAE+V+ WTGIPV+RL + E +ER+IG EAV VA++++R+R
Sbjct: 537 EVVTEEEIAEIVAAWTGIPVSRLQEGEREKLLRLDDILRERVIGQDEAVKLVADAIIRAR 596
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E +VR+DMSEY E+H+VSRL+G
Sbjct: 597 SGIRDPRRPIGSFIFLGPTGVGKTELAKTLARALFDSEENMVRLDMSEYQERHTVSRLVG 656
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVLFDEVEKAH VFNTLLQVLDDGR+TD QGRTVD
Sbjct: 657 APPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHTDVFNTLLQVLDDGRITDAQGRTVD 716
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
FRNTVIIMTSN+G+EHLL G + ++ AR V+ E+R HFRPE LNR+D+IV+F PL
Sbjct: 717 FRNTVIIMTSNIGSEHLLDGATAEGEIKPDARALVMGELRGHFRPEFLNRVDDIVLFKPL 776
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
Q+ ++ LQ ++ RLAER + + +TDAA +++ + YDP+YGARP+RR++ +V
Sbjct: 777 GERQIERIVELQFDELRRRLAERRITIELTDAARELIAHQGYDPVYGARPLRRYISHEVE 836
Query: 818 TELSRMLVREEIDENSTVYIDA 839
T + R L+R ++ + + V +DA
Sbjct: 837 TLVGRALLRGDVQDGANVRVDA 858
>gi|254561541|ref|YP_003068636.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
gi|254268819|emb|CAX24780.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
Length = 874
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/861 (52%), Positives = 600/861 (69%), Gaps = 23/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + + A LA G+ Q P HL LL DP G+ A I+ AGG++
Sbjct: 1 MNFEKYTERARGFVQAAQNLAVREGNPQLAPGHLLKVLLDDPEGLCAGLIDRAGGQSRVA 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A+ Q + K P + + A+ L+++ A+ A + GD+++ V++L+L
Sbjct: 61 HAQ--IEQWLAKQPKVSGNAAQPQATRELVRLFDTAEQAAEKAGDSYVTVERLLLAFAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+D + G + AGV A + + + LR +GR ++AS + + ALK Y RDL E A G
Sbjct: 119 KDGEAGRILTAAGVTAASLNAAINALR--KGRTADNASAENAYDALKKYARDLTEAAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L +
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKEK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
L+ALDMGAL+AGAKYRGEFEERLK VL EV AEG++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 SLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGQIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+DN+
Sbjct: 357 KYEQHHGVRIQDSALVAAATLSNRYITDRFLPDKAIDLVDEAGSRLRMQVDSKPEELDNV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ ++L+IE AL+KE D AS+ RL + KEL +L ++ + R+K EK+++ L
Sbjct: 417 DREIVRLKIEGEALKKETDSASRDRLQRLEKELANLEEQSATITARWKAEKDKLGAAAEL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTETVG 533
K+K +E L A+R+ RA +L YG I +E + ++E + M+ E V
Sbjct: 477 KKKLDEARNELASAQRQGQYQRAGELAYGVIPGLEKQLSEIEAAAESAVARDGMVEEAVT 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
P IA VVSRWTG+PV ++ + E+E R++G EAV AV+ +V R+RAGL
Sbjct: 537 PAHIAGVVSRWTGVPVDKMLEGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQ 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTEL KALA LFDD+ LVRIDMSEYME+H+V+RLIGAPPG
Sbjct: 597 DPNRPIGSFMFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVARLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 657 YVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++IMTSNLG+E+L++ G+ T V RD+V+ VR HFRPE LNR+DEI++F L+ ++
Sbjct: 717 LLIMTSNLGSEYLVNQPAGQDT-DVVRDEVMGVVRGHFRPEFLNRVDEIILFHRLARSEM 775
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ +A L +R + L V A + + YDP YGARP++R ++K V L+
Sbjct: 776 GAIVDIQLGRLAKLLEDRKITLDVDGEARTWLADKGYDPAYGARPLKRVIQKNVQDPLAE 835
Query: 823 MLVREEIDENSTVYIDASPKG 843
++ I + TV + P G
Sbjct: 836 AILSGVIHDGETVPVRVGPAG 856
>gi|167766425|ref|ZP_02438478.1| hypothetical protein CLOSS21_00930 [Clostridium sp. SS2/1]
gi|317498298|ref|ZP_07956596.1| ATP-dependent chaperone ClpB [Lachnospiraceae bacterium 5_1_63FAA]
gi|167711834|gb|EDS22413.1| ATP-dependent chaperone protein ClpB [Clostridium sp. SS2/1]
gi|291560865|emb|CBL39665.1| ATP-dependent chaperone ClpB [butyrate-producing bacterium SSC/2]
gi|316894374|gb|EFV16558.1| ATP-dependent chaperone ClpB [Lachnospiraceae bacterium 5_1_63FAA]
Length = 861
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/871 (50%), Positives = 629/871 (72%), Gaps = 31/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ ++A GH + H +LL+ + A + G
Sbjct: 1 MNINKFTQKSIEAVNQCEKIAYDHGHQEIDQEHFLYSLLTIDDSLIASLLEKMG------ 54
Query: 61 SAERVFNQAMKKLPSQTP--APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ F +++L ++ P + ++ S L +V+ + KA D +++V+ L L ++
Sbjct: 55 INKETFLSQVQELLNKKPKVSGGQVYMSNDLNQVLLHGEDEMKAMKDEYVSVEHLFLAMI 114
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ + + +LF+ G+ R + ++RG G+KV S + + T+ +L+ YG DLV++A
Sbjct: 115 KHPNKAVKELFRAYGITRDRFLQVLSQIRG--GQKVTSDNPEETYDSLEKYGYDLVKRAR 172
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
KLDPVIGRD EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L
Sbjct: 173 EQKLDPVIGRDSEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPDQLK 232
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + +LDMG+LVAGAKYRGEFEERLKAVL+EV++++G++ILFIDE+H ++GAG+T+G+M
Sbjct: 233 DKTIFSLDMGSLVAGAKYRGEFEERLKAVLEEVKKSDGQIILFIDELHTIVGAGKTDGAM 292
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQ V V +P+V DT+SILRG+
Sbjct: 293 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDQALERRFQPVMVDQPTVEDTISILRGI 352
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
K++YE +HGV+I D +LV AA LS RYIT R LPDKAIDLVDEACA ++ +++S P E+D
Sbjct: 353 KDRYEVYHGVKITDSSLVAAATLSNRYITDRFLPDKAIDLVDEACAMIKTEMNSLPAELD 412
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
++RK MQ+EIE AL+KE D+ SK RL E++KEL ++R+ + R++ EK ++++
Sbjct: 413 EVQRKIMQMEIEEAALKKEDDRLSKERLEELQKELAEMREDFKARKARWENEKASVEKVS 472
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN-LMLTETVG 533
+L+++ E + +Q A+R YDL +AA+L+YG + E++ + + E + E+ M+ E+V
Sbjct: 473 KLREEIESVNSEIQIAQRNYDLNKAAELQYGRLPELKKQLEEEEERVAKEDRSMVRESVT 532
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
D+IA+++SRWTGIPV +L ++E+ ER++G EAV V ES++RS+AG+
Sbjct: 533 EDEIAKIISRWTGIPVAKLTESERNKTLHLDKILHERVVGQDEAVELVTESIIRSKAGIK 592
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAKALAE LFD+E +VRIDMSEYME+HSV+RLIGAPPG
Sbjct: 593 DPSKPIGSFLFLGPTGVGKTELAKALAESLFDNEQNIVRIDMSEYMEKHSVARLIGAPPG 652
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD +G+TVDF+NT
Sbjct: 653 YVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRITDSKGKTVDFKNT 712
Query: 703 VIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
++IMTSN+G+ +LL G+ G + + A+D V+ +++ HFRPE LNRLDE ++F PL+
Sbjct: 713 ILIMTSNIGSSYLLEGIDEDGNIKPE-AQDMVMNDLKNHFRPEFLNRLDETIMFKPLTKA 771
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + L +KD+ RLA++ +++ +T AA + V Y+P+YGARP++R+L+K V T
Sbjct: 772 NITNIIDLLVKDLNRRLADKELSVELTSAAKNYVADHGYEPMYGARPLKRYLQKSVETLA 831
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+R+++ + +D T+ ID + D L+ +V+
Sbjct: 832 ARLILSDGVDAEDTILIDV--ENDQLIAKVK 860
>gi|350566898|ref|ZP_08935520.1| chaperone protein ClpB [Peptoniphilus indolicus ATCC 29427]
gi|348660737|gb|EGY77442.1| chaperone protein ClpB [Peptoniphilus indolicus ATCC 29427]
Length = 859
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/855 (52%), Positives = 615/855 (71%), Gaps = 25/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T K+ EAI A LA G+ Q +HL +L++D G+ + + G + +A
Sbjct: 1 MNFEKYTKKSLEAIQNAQNLAREYGNPQVDEIHLNYSLVNDEDGLIPRILKYMGVDTSAF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
E + + KLP Q+ + +S + K + ++ D +++V+ + L LL
Sbjct: 61 KNELI--NKISKLPKQSGT---VYSSKDISKALVDSEEIANNFQDDYVSVEHIYLALLGL 115
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+++ + K+ + + ++K+RG + V + + + T+ AL+ YGRDL +A G
Sbjct: 116 KNTNSSESLKKFNITKESFLAALQKIRG--NQHVRTDNPEDTYDALEKYGRDLTAEARQG 173
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DPVIGRDEE+R V+RILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP L D
Sbjct: 174 KMDPVIGRDEEVRNVIRILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDK 233
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+I+LDMGALVAGAKYRGEFEERLKAVL EVE+++GK++LFIDEIH ++GAG+TEG+MDA
Sbjct: 234 TIISLDMGALVAGAKYRGEFEERLKAVLSEVEKSDGKILLFIDEIHNIVGAGKTEGAMDA 293
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KPMLARG+L IGATTL+EYRKY+EKD A ERRFQ+V V EP+V DT+SILRGLKE
Sbjct: 294 SNLLKPMLARGELHAIGATTLDEYRKYIEKDPALERRFQKVMVQEPTVEDTISILRGLKE 353
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE +HG+RI D A++ AA LS RYIT R LPDKAIDL+DEACA +R ++DS P EID++
Sbjct: 354 KYEIYHGIRIADSAVIAAATLSDRYITDRFLPDKAIDLMDEACAMLRTEIDSMPTEIDDV 413
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
R+ +QLEIE AL+KE D SK RL E+ KEL + + + L ++ EK+ +D+++ L
Sbjct: 414 RRRILQLEIEREALKKETDNYSKKRLEELEKELSEEKSEFDNLKATWESEKQSLDKVKDL 473
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K K +E+ + +++AER Y+L + + L+YG + ++E + + E E+ M+ E V +
Sbjct: 474 KSKIDEVKYEIEKAEREYNLEKLSVLKYGELPKLEEELREKEAQNQVESSMVKEVVTDQE 533
Query: 537 IAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQ 585
IA VVSRWT IPV +L + E+++L+ ++ EA+ AV+++VLR RAGL
Sbjct: 534 IAHVVSRWTKIPVEKLAETERDKLLSMSDILHQRVVGQDEAIEAVSDAVLRQRAGLKSEN 593
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTE AKAL E LFDDE ++RIDMSEYME+HSVSRL+G+PPGYVG
Sbjct: 594 RPIGSFIFLGPTGVGKTETAKALTEILFDDEKNMIRIDMSEYMEKHSVSRLVGSPPGYVG 653
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGGQLTEAVRR PY VVLFDE+EKAH VFN LLQVLDDGRLTD QGRTVDF+NTVII
Sbjct: 654 YDEGGQLTEAVRRMPYCVVLFDEIEKAHPDVFNILLQVLDDGRLTDNQGRTVDFKNTVII 713
Query: 706 MTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
MTSN+G+ +LL G+ G+++ Q ARD V ++R FRPE LNR+DEIV+F PL EQ+
Sbjct: 714 MTSNIGSSYLLDGINSDGEIS-QEARDAVDSQMRMSFRPEFLNRVDEIVLFKPLVKEQIY 772
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ + ++ + +LA+R + + VTD A+ +L SY P YGARP++R+++ + TELS++
Sbjct: 773 EIIKKTVEHIESKLADRNIEIEVTDEAMRFILDASYSPQYGARPVKRYIQSTLETELSKL 832
Query: 824 LVREEIDENSTVYID 838
+++ E+ ENS V +D
Sbjct: 833 IIKGEVYENSKVKVD 847
>gi|154245846|ref|YP_001416804.1| ATPase [Xanthobacter autotrophicus Py2]
gi|154159931|gb|ABS67147.1| ATPase AAA-2 domain protein [Xanthobacter autotrophicus Py2]
Length = 879
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/864 (53%), Positives = 600/864 (69%), Gaps = 32/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN + +T + + A LAT G+ QFTP HL L+ DP G+ + I AGG
Sbjct: 1 MNFEIYTERARGFVQSAQSLATREGNQQFTPEHLLKVLMDDPEGLCSGLIQRAGGNLVLV 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
AE A+KKLP ++ S L KV A+ A K GD ++ V++++L L
Sbjct: 61 RAE--VEAALKKLPKVEGGSGQVYLSQQLAKVFETAEQAAKKAGDGYVTVERMLLALTIE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+D++ G + +AGV + + +E LR +GR +SA+ + + ALK Y RDL + G
Sbjct: 119 KDTEAGRILVKAGVTPQTLNAAIEALR--KGRTADSATAENAYDALKKYARDLTQAVRDG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++L+RRTKNNPVLIGEPGVGKTA+VEGLA+RIV GDVP +L +
Sbjct: 177 KLDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLARRIVDGDVPESLKNK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
L+ALDMG+L+AGAKYRGEFEERLK+VL EVE AEG +ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 SLLALDMGSLIAGAKYRGEFEERLKSVLSEVESAEGGIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+D+L
Sbjct: 357 KYELHHGVRITDSALVSAAVLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDSL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ M+ +IE AL+KE D ASK RL KEL DL +K L ++K EKE++ L
Sbjct: 417 DREIMRRKIEQEALKKETDTASKDRLKRSEKELADLEEKASVLTSKWKAEKEKLGAATTL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K K ++ L A+R+ + +A +L Y I E+E + ++E M+ E V P+
Sbjct: 477 KSKLDQARADLATAQRQGEYQKAGELTYSVIPELEKKLAEVE-KAGAAGQMVEEAVTPNH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA VVSRWTG+PV ++ + E+E+L +G +EAV AV+ +V R+RAGL P
Sbjct: 536 IAGVVSRWTGVPVDKMLEGEREKLLRMELELAKRVVGQSEAVAAVSTAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSFLFLGPTGVGKTEL KALAE LFDDE +VRIDMSEYME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFLFLGPTGVGKTELTKALAEFLFDDETAMVRIDMSEYMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRN +I+
Sbjct: 656 YDEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVLIV 715
Query: 706 MTSNLGAEHL----------LSGMMGK--VTMQVARDQVLQEVRKHFRPELLNRLDEIVV 753
MTSNLGAE L + G G+ V+ + A D V+ VR+HFRPE +NR+DEIV+
Sbjct: 716 MTSNLGAEFLADPRQPMGFKVPGHEGETVVSDEEAYDMVMGAVRRHFRPEFINRIDEIVM 775
Query: 754 FDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLE 813
F L EQ+ + +QM + L +R + + ++ A + + YDP YGARP++R ++
Sbjct: 776 FHRLKREQMDSIVDIQMGRLRKLLEDRKITIELSPEARAFLAEKGYDPAYGARPLKRTIQ 835
Query: 814 KKVVTELSRMLVREEIDENSTVYI 837
K V L+ ++ + + +TV +
Sbjct: 836 KLVQDPLAEKILAGTVLDGATVKV 859
>gi|411002904|ref|ZP_11379233.1| ATP-dependent Clp protease [Streptomyces globisporus C-1027]
Length = 879
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/861 (52%), Positives = 613/861 (71%), Gaps = 25/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
M+ ++ T K+ EA+ A +A GH + HL +AL+ G+ + + AG + A
Sbjct: 1 MDMNRLTQKSQEALQEAQSVAGRMGHTEVDGEHLLLALVDQEDGLIPRLLQQAGSDPAEL 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
++A R K+ AP ++ + L ++ A+ K D +++V+ L+L L E
Sbjct: 61 RTAVREEISRRPKVTGSGAAPGQVFVTQRLAGLLDAAEREAKRLKDEYVSVEHLLLALAE 120
Query: 120 D---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ + G L +AG+ + ++RG + +V SA+ + ++AL+ YGRDLV +A
Sbjct: 121 EGASTAAGRLLNQAGITRDSFLGALTQVRGNQ--RVTSANPEVAYEALEKYGRDLVAEAK 178
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
G+LDPVIGRD EIRRV +ILSR++KNNPVLIG+PGVGKTA++EGLAQRIVRGDVP L
Sbjct: 179 EGRLDPVIGRDAEIRRVTQILSRKSKNNPVLIGDPGVGKTAIIEGLAQRIVRGDVPEGLR 238
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + ALDMG+LVAGAKYRGEFEERLKAVL EV+ A+G ++LF+DE+H V+GAG EG+M
Sbjct: 239 DKIVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQGGILLFVDELHTVVGAGAAEGAM 298
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L IGATTL+EYRK++EKDAA ERRFQQV V EPSV DT+SILRGL
Sbjct: 299 DAGNMLKPMLARGELHMIGATTLDEYRKHIEKDAALERRFQQVLVDEPSVEDTISILRGL 358
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
+E+ E HGV+IQD ALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E+D
Sbjct: 359 RERLEVFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAELD 418
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ +LEIE AL KE D AS+ARL E+RKEL DLR + +++ E++ I ++
Sbjct: 419 EITRRVTRLEIEEAALSKESDPASQARLEELRKELADLRGEADAKHAQWEAERQAIRRVQ 478
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTET 531
L++ E++ +EAER YDL RAA+LRYG +Q++E + E + +N +L E
Sbjct: 479 ELRKDLEQVRHDAEEAERAYDLNRAAELRYGRLQDLERRLAAEEEQLATRQGQNRLLREV 538
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAG 580
V ++IAE+V+ WTGIPV RL + E +ER++G EAV VA++++R+R+G
Sbjct: 539 VTEEEIAEIVAAWTGIPVARLQEGERDKLLRLDEILRERVVGQDEAVKLVADAIIRARSG 598
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P++P GSF+FLGPTGVGKTEL K LA LFD E+ +VR+DMSEY E+H+VSRL+GAP
Sbjct: 599 IRDPRRPIGSFIFLGPTGVGKTELTKTLARALFDSEDNMVRLDMSEYQERHTVSRLMGAP 658
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQ+LDDGR+TD QGRTVDFR
Sbjct: 659 PGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHSDVFNTLLQILDDGRITDAQGRTVDFR 718
Query: 701 NTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
NTVIIMTSN+G+EHLL G G++ + AR V+ E+R HFRPE LNR+D+IV+F PL
Sbjct: 719 NTVIIMTSNIGSEHLLDGATVEGEIKPE-ARALVMGELRGHFRPEFLNRVDDIVLFRPLG 777
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
Q+ ++ LQ ++ RLAER + + +TDAA ++ + YDP+YGARP+RR++ +V T
Sbjct: 778 ERQIERIVELQFDELRQRLAERRIDVELTDAARKVISHQGYDPVYGARPLRRYISHEVET 837
Query: 819 ELSRMLVREEIDENSTVYIDA 839
+ R L+R ++ + +T+ +DA
Sbjct: 838 LVGRALLRGDVQDGATIRVDA 858
>gi|75674787|ref|YP_317208.1| ATPase AAA [Nitrobacter winogradskyi Nb-255]
gi|74419657|gb|ABA03856.1| AAA ATPase [Nitrobacter winogradskyi Nb-255]
Length = 891
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/855 (52%), Positives = 597/855 (69%), Gaps = 23/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A LA GH QFTPLH+ LL D G+ I+ AGG + +
Sbjct: 14 MNIEKYTERVRGFIQSAQSLAMREGHQQFTPLHILKVLLDDSEGLAGSLIDRAGGNS--R 71
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGL 117
+ + A+ K+P + A +I + + A+ A GD+ + V++L+ L L
Sbjct: 72 AILKATEAALDKMPKVSGAGAGQIYLAPATARAFDAAEQAAGKAGDSFVTVERLLQSLSL 131
Query: 118 LEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
DS L K+ GV + + + LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 132 DADSDAFKLLKDGGVTPQNLNAAINALR--KGRTADSATAENAYDALKKYARDLTQAARE 189
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 190 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKD 249
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L+ALD+G+++AGAKYRGEFEERLKAVL+EV A+G ++LFIDE+H ++GAG+ +G+MD
Sbjct: 250 KKLLALDLGSMIAGAKYRGEFEERLKAVLQEVTSADGGIVLFIDEMHTLIGAGKADGAMD 309
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ ++V+EP+V DTVSILRGLK
Sbjct: 310 ASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPIFVSEPTVEDTVSILRGLK 369
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA A +++Q+DS+PEE+D+
Sbjct: 370 DKYEQHHGVRIADSALVAAATLSHRYITDRFLPDKAIDLVDEAAARLKMQVDSKPEELDS 429
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ ++L+IE AL+KE D S+ RL + KEL DL + L R+ EK ++ + R
Sbjct: 430 LDREIVRLKIEQEALKKESDAGSRTRLENLEKELADLEKRSADLTSRWNAEKNKLSDAAR 489
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + ++ L A+RR + A +L YG I E+E + +E +S N M+ ETV D
Sbjct: 490 LKSELDQARIELANAQRRGEYQIAGELAYGRIPELEKRLQSIEAGES--NTMMNETVTAD 547
Query: 536 QIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EKE R++G EAV AV+ +V R+RAGL P
Sbjct: 548 SIAQVVSRWTGVPVDKMLEGEKEKLLRMEESLAARVVGQGEAVRAVSTAVRRARAGLQDP 607
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALA LFDDE +VRIDMSEYME+HSV+RLIGAPPGYV
Sbjct: 608 NRPMGSFMFLGPTGVGKTELTKALAAYLFDDETAMVRIDMSEYMEKHSVARLIGAPPGYV 667
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 668 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 727
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T V R+QV++ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 728 IMTSNLGSEFLVNQPEGEDTGAV-REQVMEMVRGHFRPEFLNRVDEIILFHRLQKSEMGR 786
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L +R + L + AA D + + +DP YGARP++R +++ V L+ M+
Sbjct: 787 IVEIQFSRLQKLLEDRKIVLDLDSAARDRLAEKGWDPAYGARPLKRVIQRSVQDPLAEMI 846
Query: 825 VREEIDENSTVYIDA 839
+ + + V I A
Sbjct: 847 LAGAVRDGDRVVISA 861
>gi|391227736|ref|ZP_10263943.1| ATP-dependent chaperone ClpB [Opitutaceae bacterium TAV1]
gi|391223229|gb|EIQ01649.1| ATP-dependent chaperone ClpB [Opitutaceae bacterium TAV1]
Length = 904
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/865 (52%), Positives = 615/865 (71%), Gaps = 25/865 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P++FT + +AI A A + + HL ALLS +GI + G +A
Sbjct: 45 MDPNQFTQMSRQAITDAQSEARRRNNNEVDTWHLLHALLSQENGIVPAIVEKLGLTTSA- 103
Query: 61 SAERVFNQAMKKLPSQTPAPD--EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ + + +LP + + D ++ + + V+ RA+ K D ++V+ L L L+
Sbjct: 104 -LQLALQRELDRLPRVSGSVDTSKVYVTQAVNDVLTRAEEEAKQLKDEFVSVEHLFLALI 162
Query: 119 EDSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
E ++ K G+ V + +LRG ++V + + + T+ ALK YG DLVE A
Sbjct: 163 EVAKPEAFARYLKSFGIDRRAVLKTLSELRG--AQRVTTDNPEATYNALKKYGIDLVELA 220
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GK+DPVIGRD+EIRR +RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP L
Sbjct: 221 RKGKMDPVIGRDDEIRRTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPEGL 280
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + +LDMGALVAGAKYRGEFEERLKAVL EV++++G+++LFIDE+H ++GAG+TEG+
Sbjct: 281 KDKTIFSLDMGALVAGAKYRGEFEERLKAVLNEVKQSDGRILLFIDELHTIVGAGKTEGA 340
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATTL+EYR+++EKDAA ERRFQ V V PSV D +SILRG
Sbjct: 341 MDAGNLLKPMLARGELHCIGATTLDEYRQHIEKDAALERRFQPVQVEPPSVEDAISILRG 400
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
L+E++E HHGVRIQD ALV A LS RYI+ R LPDKAIDLVDEACA +R ++DS P+E+
Sbjct: 401 LRERFELHHGVRIQDNALVAAVTLSNRYISDRFLPDKAIDLVDEACAMIRTEMDSMPQEL 460
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L R+ +QLEIE AL+ EKD AS+ RL +RKEL + R++ L ++++EK ID +
Sbjct: 461 DALTRRALQLEIEETALKLEKDDASRQRLETLRKELANTREQADALKRQWEREKASIDRV 520
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVG 533
R+++++ + A+++AER YDL + A+LR+G I ++EA + +LE + L E V
Sbjct: 521 RKVREELDAARLAMEKAERAYDLNKLAELRHGKIPQLEAELKKLETTGAQTQL-FKEEVS 579
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
+++AE+V++W+GIPVTRL ++E+ ER+IG EAV +E++LR+RAG+
Sbjct: 580 AEEVAEIVAKWSGIPVTRLVESEREKLLRLGEVLHERVIGQDEAVQLTSEAILRARAGIK 639
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P++P GSFLFLGPTGVGKTELAK LAE LFD E ++RIDMSEYME+HSV+RLIGAPPG
Sbjct: 640 DPRRPVGSFLFLGPTGVGKTELAKTLAETLFDSEAAMIRIDMSEYMEKHSVARLIGAPPG 699
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEAVRR+PY+VVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT
Sbjct: 700 YVGYDEGGQLTEAVRRKPYAVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNT 759
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IIMTSN+G+ +LL G+ G + R+ V+ E+RK FRPE LNR+DE ++F PL+ E++
Sbjct: 760 IIIMTSNIGSRYLLDGVTGDTIPESVRESVMAELRKGFRPEFLNRIDETILFKPLTLEEI 819
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
K+ L + D+ RLA+R V + + A + YDP++GARP++R+L++++ T L+R
Sbjct: 820 TKIVDLLLADLNKRLADRRVTVELDKKAKTWAGEKGYDPVFGARPLKRFLQRQIETRLAR 879
Query: 823 MLVREEIDENSTVYIDASPKGDNLV 847
L+ E+ E STV K D LV
Sbjct: 880 ALITGEVKEGSTVTFKV--KNDELV 902
>gi|373850028|ref|ZP_09592829.1| ATP-dependent chaperone ClpB [Opitutaceae bacterium TAV5]
gi|372476193|gb|EHP36202.1| ATP-dependent chaperone ClpB [Opitutaceae bacterium TAV5]
Length = 904
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/865 (52%), Positives = 615/865 (71%), Gaps = 25/865 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P++FT + +AI A A + + HL ALLS +GI + G +A
Sbjct: 45 MDPNQFTQMSRQAITDAQSEARRRNNNEVDTWHLLHALLSQENGIVPAIVEKLGLTTSA- 103
Query: 61 SAERVFNQAMKKLPSQTPAPD--EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ + + +LP + + D ++ + + V+ RA+ K D ++V+ L L L+
Sbjct: 104 -LQLALQRELDRLPRVSGSVDTSKVYVTQAVNDVLTRAEEEAKQLKDEFVSVEHLFLALI 162
Query: 119 EDSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
E ++ K G+ V + +LRG ++V + + + T+ ALK YG DLVE A
Sbjct: 163 EVAKPEAFARYLKSFGIDRRTVLKTLSELRG--AQRVTTDNPEATYNALKKYGIDLVELA 220
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GK+DPVIGRD+EIRR +RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP L
Sbjct: 221 RKGKMDPVIGRDDEIRRTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPEGL 280
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + +LDMGALVAGAKYRGEFEERLKAVL EV++++G+++LFIDE+H ++GAG+TEG+
Sbjct: 281 KDKTIFSLDMGALVAGAKYRGEFEERLKAVLNEVKQSDGRILLFIDELHTIVGAGKTEGA 340
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATTL+EYR+++EKDAA ERRFQ V V PSV D +SILRG
Sbjct: 341 MDAGNLLKPMLARGELHCIGATTLDEYRQHIEKDAALERRFQPVQVEPPSVEDAISILRG 400
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
L+E++E HHGVRIQD ALV A LS RYI+ R LPDKAIDLVDEACA +R ++DS P+E+
Sbjct: 401 LRERFELHHGVRIQDNALVAAVTLSNRYISDRFLPDKAIDLVDEACAMIRTEMDSMPQEL 460
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L R+ +QLEIE AL+ EKD AS+ RL +RKEL + R++ L ++++EK ID +
Sbjct: 461 DALTRRALQLEIEETALKLEKDDASRQRLETLRKELANTREQADALKRQWEREKASIDRV 520
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVG 533
R+++++ + A+++AER YDL + A+LR+G I ++EA + +LE + L E V
Sbjct: 521 RKVREELDAARLAMEKAERAYDLNKLAELRHGKIPQLEAELKKLETTGAQTQL-FKEEVS 579
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
+++AE+V++W+GIPVTRL ++E+ ER+IG EAV +E++LR+RAG+
Sbjct: 580 AEEVAEIVAKWSGIPVTRLVESEREKLLRLGEVLHERVIGQDEAVQLTSEAILRARAGIK 639
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P++P GSFLFLGPTGVGKTELAK LAE LFD E ++RIDMSEYME+HSV+RLIGAPPG
Sbjct: 640 DPRRPVGSFLFLGPTGVGKTELAKTLAETLFDSEAAMIRIDMSEYMEKHSVARLIGAPPG 699
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEAVRR+PY+VVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT
Sbjct: 700 YVGYDEGGQLTEAVRRKPYAVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNT 759
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IIMTSN+G+ +LL G+ G + R+ V+ E+RK FRPE LNR+DE ++F PL+ E++
Sbjct: 760 IIIMTSNIGSRYLLDGVTGDTIPESVRESVMAELRKGFRPEFLNRIDETILFKPLTLEEI 819
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
K+ L + D+ RLA+R V + + A + YDP++GARP++R+L++++ T L+R
Sbjct: 820 TKIVDLLLADLNKRLADRRVTVELDKKAKTWAGEKGYDPVFGARPLKRFLQRQIETRLAR 879
Query: 823 MLVREEIDENSTVYIDASPKGDNLV 847
L+ E+ E STV K D LV
Sbjct: 880 ALITGEVKEGSTVTFKV--KNDELV 902
>gi|365898598|ref|ZP_09436548.1| Chaperone [Bradyrhizobium sp. STM 3843]
gi|365420664|emb|CCE09090.1| Chaperone [Bradyrhizobium sp. STM 3843]
Length = 879
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/864 (53%), Positives = 611/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A LA GH QF+PLHL LL D G+ + I+ AGG ++
Sbjct: 1 MNIEKYTERARGFIQSAQSLAMRDGHQQFSPLHLLKVLLDDNEGLASGLIDRAGGN--SR 58
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ + A+ KLP + ++ S L + A+ A + GD+ + V++L+LGL
Sbjct: 59 AILKATEDALNKLPKVSGSGAGQVYLSPELARAFDAAEKAAEKAGDSFVTVERLLLGLTL 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
++ + G + + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 EKNGEAGGILNKGGVTAQNLNAAIESLR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIINGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
RL+ALD+GAL+AGAKYRGEFEERLKAVL+EV AEG ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KRLLALDLGALIAGAKYRGEFEERLKAVLQEVTAAEGSFILFIDEMHTLIGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EY+K+VEKDAA RRFQ ++V EPSV DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPIFVTEPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV +A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ ++L+IE AL+KE D SK RL + KEL +L ++ L ++ EK+++ ++
Sbjct: 417 LDREIIRLKIEQEALKKESDIGSKTRLQALEKELAELEERSAALTTKWSAEKDKLSNAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + +A +L YG I E+E + +E + + M+ E V +
Sbjct: 477 LKSELDALRIELANAQRRGEYQKAGELAYGRIPELEKRLADIEAKE-NAGEMMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EKE+L +G AEAV AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKEKLLKMEESLGKRVVGQAEAVRAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPIGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T +V RDQV+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSEFLVNQPEGEDTSEV-RDQVMATVRAHFRPEFLNRVDEIILFHRLQKSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L ER + L++ AA D + + +DP YGARP++R +++ + L+ M+
Sbjct: 775 IVEIQFARLQKLLEERKIELSLDGAARDWLAVKGWDPAYGARPLKRVIQRHLQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ EI + V I S +G+ L +
Sbjct: 835 LAGEIKDGDKVAI--SSEGNVLTF 856
>gi|170743190|ref|YP_001771845.1| ATP-dependent chaperone ClpB [Methylobacterium sp. 4-46]
gi|168197464|gb|ACA19411.1| ATP-dependent chaperone ClpB [Methylobacterium sp. 4-46]
Length = 878
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/863 (52%), Positives = 599/863 (69%), Gaps = 25/863 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + + A LA GH Q +P H+ LL DP G+ A I AGG++
Sbjct: 1 MNFEKYTERARGFVQAAQNLALREGHPQLSPGHVLKVLLDDPEGLCAGLIERAGGQSRVA 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A+ + K P + + A+ L+++ A+ A + GD+++ V++L+L L
Sbjct: 61 LAQ--TEAWLAKQPKVSGGASQPQATRDLMRLFDTAEKAAEKAGDSYVTVERLLLALAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+DS+ G AGV + + + LR +GR ++ + + + ALK Y RDL E A G
Sbjct: 119 KDSEAGRALAAAGVTAQSLNAAINALR--KGRTADNPTAENAYDALKKYARDLTEAAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIINGDVPESLRDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLK VL EV AEG +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 QLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGGIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+DN+
Sbjct: 357 KYEQHHGVRIQDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDNV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ ++L+IE AL+KE D AS+ RL + KEL DL ++ + R+K EK+++ L
Sbjct: 417 DREIVRLKIEAEALKKETDAASRDRLTRLEKELGDLEEQSAAITARWKAEKDKLGRAAEL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE-----GNQSDENLMLTET 531
K+K +E L A+R+ RA +L YG I +E +G +E G++ + + + E
Sbjct: 477 KKKLDEARTELASAQRQGQYQRAGELAYGIIPGLERELGDIEARGPDGSRGNGSGFMEEA 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
V P+ +A VVSRWTG+PV ++ + E+E R++G EAV AVA +V R+RAG
Sbjct: 537 VTPNHVAGVVSRWTGVPVDKMLEGEREKLLAMEEALGRRVVGQREAVEAVATAVRRARAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P GSF+FLGPTGVGKTEL KALA LFDDE +VR+DMSEYME+HSV+RLIGAP
Sbjct: 597 LQDPNRPIGSFMFLGPTGVGKTELTKALASFLFDDETAMVRLDMSEYMEKHSVARLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFR
Sbjct: 657 PGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+++MTSNLGAE+L++ G+ T V RD+V+ VR HFRPE LNR+DEI++F L
Sbjct: 717 NTLLVMTSNLGAEYLVNQPEGQDTDAV-RDEVMAVVRAHFRPEFLNRVDEIILFHRLKRA 775
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++ + +Q+ + L ER + L V A + YDP YGARP++R ++K V +
Sbjct: 776 EMGAIVDIQLGRLQKLLDERKITLDVEPDARAWLAERGYDPAYGARPLKRVIQKSVQDPM 835
Query: 821 SRMLVREEIDENSTVYIDASPKG 843
+ ++ + + V + P+G
Sbjct: 836 AEQILAGSVHDGEAVRVRLGPEG 858
>gi|154484603|ref|ZP_02027051.1| hypothetical protein EUBVEN_02319 [Eubacterium ventriosum ATCC
27560]
gi|149734451|gb|EDM50368.1| ATP-dependent chaperone protein ClpB [Eubacterium ventriosum ATCC
27560]
Length = 858
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/855 (52%), Positives = 606/855 (70%), Gaps = 23/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EAI ++A G+ + HL +L++ + + I +
Sbjct: 1 MNISKFTQKSVEAIQNCEKVAAEYGNQEIDQEHLIYSLITLDDSLIIKLIEKMEIQ-PEH 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
RV + KK Q P S L + A+ K GD +++V+ + L L++
Sbjct: 60 FRNRVEDYIAKKPKVQGGNP---YVSQALNNALIYAEDEAKRMGDEYVSVEHIFLSLIDR 116
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ ++ +LF+E G+ R +E +RG KV S + ++T+ AL YG+DLVE+A
Sbjct: 117 PNKEVAELFREYGIKRERFLGALETVRG--NVKVTSDNPESTYDALSKYGQDLVERARNQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA VEGLAQRIVRGDVP L D
Sbjct: 175 KLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAAVEGLAQRIVRGDVPEGLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
++ ALD+GALVAGAKYRGEFEERLKAVL++V+ ++G +ILFIDE+H ++GAG+T+G+MDA
Sbjct: 235 KIFALDLGALVAGAKYRGEFEERLKAVLEDVKNSDGNIILFIDELHTIVGAGKTDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQ V V EP+V DT+SILRGLKE
Sbjct: 295 GNMLKPMLARGELHCIGATTLDEYRQYIEKDKALERRFQPVMVNEPTVEDTISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+IQD ALV AA LS RYIT R LPDKAIDLVDEACA ++ ++DS P E+D L
Sbjct: 355 RYEVFHGVKIQDGALVSAATLSDRYITDRFLPDKAIDLVDEACALIKTEMDSMPTELDEL 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK MQLEIE AL+KE D SK RL E++KEL ++RD+ +++ EK+ + +++ L
Sbjct: 415 RRKVMQLEIEEAALKKETDNLSKERLAELQKELAEMRDEFNNKKAQWENEKDSVTKLQDL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL-MLTETVGPD 535
+++ E + +++A+ Y+L +AA+L+YG + +++ + E +++L +L E+V +
Sbjct: 475 REQVENVKKDIEKAQSEYNLEKAAELQYGKLPQLQKQLEAEEAAVKNKDLSLLRESVTDE 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA ++SRWTGIPV +L + E+E R+IG EAV + ES++RS+AG+ P
Sbjct: 535 EIARIISRWTGIPVAKLTETEREKTLHLDKQLHKRVIGQDEAVTKITESIIRSKAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALA+ LFDDE+ +VRIDMSEYME++SVSRLIGAPPGYV
Sbjct: 595 SKPIGSFLFLGPTGVGKTELAKALAQNLFDDESNMVRIDMSEYMEKYSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT++
Sbjct: 655 GYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTIL 714
Query: 705 IMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IMTSN+G+ +LL G+ + Q +D V+ ++R HFRPE LNRLDEI++F PL+ + +
Sbjct: 715 IMTSNIGSSYLLEGIDDNGNIKQENQDLVMNDLRNHFRPEFLNRLDEIIMFKPLTRDNIG 774
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ L + V RL +R + + +TDAA V YDP+YGARP++R+L+K V T +R+
Sbjct: 775 GIVDLVIDSVNERLKDRELQIKLTDAAKTYVADNGYDPVYGARPLKRYLQKNVETLAARV 834
Query: 824 LVREEIDENSTVYID 838
++ ++ T+ D
Sbjct: 835 ILEGKVSMGDTITFD 849
>gi|312112024|ref|YP_003990340.1| ATP-dependent chaperone ClpB [Geobacillus sp. Y4.1MC1]
gi|311217125|gb|ADP75729.1| ATP-dependent chaperone ClpB [Geobacillus sp. Y4.1MC1]
Length = 865
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/879 (52%), Positives = 622/879 (70%), Gaps = 43/879 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSG----IFAQAINNAGGE 56
MN +KFT K EA A ++AT H Q HL +ALL G IF N G
Sbjct: 1 MNANKFTEKVQEAFLEAQKIATRHHHQQLDLEHLLLALLRQEEGLAGRIFTLLHVNIGA- 59
Query: 57 NAAQSAERVFNQAMKKLPSQTP-----APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVD 111
F ++ L + P + + S L +++ +A+ K D +++V+
Sbjct: 60 ---------FIHELEALLKKKPEVLGAGAENLYMSQRLQRLLAKAEKEAKNMQDEYISVE 110
Query: 112 QLILGLLEDSQ-IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRD 170
L+L E++ IG LF+ + + + + ++RG + +V S + + T++ALK YGRD
Sbjct: 111 HLLLAFTEETDDIGRLFQRYNINRSSLLRVLTEIRGNQ--RVTSPNPEVTYEALKKYGRD 168
Query: 171 LVEQ--AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD 228
LV + AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR D
Sbjct: 169 LVAEVKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKD 228
Query: 229 VPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAG 288
VP L D + ALDM +LVAGAK+RGEFEERL AVL E++++EG++ILFIDE+H ++GAG
Sbjct: 229 VPEGLKDKTIFALDMSSLVAGAKFRGEFEERLTAVLNEIKKSEGRIILFIDELHTIVGAG 288
Query: 289 RTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTV 348
R EG+MDA N+ KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQQV V EPSV DT+
Sbjct: 289 RAEGAMDAGNMLKPMLARGELHCIGATTLDEYRQYIEKDPALERRFQQVLVEEPSVEDTI 348
Query: 349 SILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDS 408
SILRGL+E++E HHGV+I DRALV AA L+ RYI+ R LPDKAIDLVDEACA +R ++DS
Sbjct: 349 SILRGLRERFEVHHGVKIHDRALVAAATLADRYISDRFLPDKAIDLVDEACATIRTEMDS 408
Query: 409 QPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKE 468
P E+D + R+ MQLEIE AL KE D+ASK RL + KEL DLR+K + M++++EKE
Sbjct: 409 MPSELDEVMRRVMQLEIEEAALRKETDEASKERLAALTKELADLREKADSMKMQWQQEKE 468
Query: 469 RIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN--- 525
I +R +++ E+ L+EAE YDL RAA+LR+G I ++E + QLE S+ N
Sbjct: 469 AIQRVRDVREALEKAKRELEEAENEYDLNRAAELRHGRIPQLEKQLKQLEQEMSENNKEG 528
Query: 526 LMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKER-----------LIGLAEAVNAVAESV 574
+L E V ++IAE+VSRWTGIP+TRL + E+E+ +IG EAV VA++V
Sbjct: 529 RLLREEVTEEEIAEIVSRWTGIPLTRLVEGEREKLLRLHELLHERVIGQDEAVELVADAV 588
Query: 575 LRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVS 634
LR+RAG+ P +P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME+H+VS
Sbjct: 589 LRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAHALFDSEEQMIRIDMSEYMEKHAVS 648
Query: 635 RLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQG 694
RLIGAPPGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGR+TD QG
Sbjct: 649 RLIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHPEVFNILLQLLDDGRITDSQG 708
Query: 695 RTVDFRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIV 752
RTVDF+NTV+IMTSN+G+ LL G+ GK+ + +QVLQ++R HFRPE LNR+D++V
Sbjct: 709 RTVDFKNTVVIMTSNIGSHLLLEGVTEDGKIKEE-THEQVLQQLRAHFRPEFLNRIDDVV 767
Query: 753 VFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWL 812
+F PLS +++ + ++++ RL +R + L +T+AA + +DP+YGARP++R++
Sbjct: 768 LFKPLSVNEVKGIVEKFARELSRRLTDRHIELVLTEAAKQYIAEAGFDPVYGARPLKRFM 827
Query: 813 EKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+K++ T L++ L+ + + STV +DA + LV R Q
Sbjct: 828 QKQIETPLAKELIAGRVKDYSTVIVDA--ENGRLVIRPQ 864
>gi|254380625|ref|ZP_04995991.1| chaperone protein clpB [Streptomyces sp. Mg1]
gi|194339536|gb|EDX20502.1| chaperone protein clpB [Streptomyces sp. Mg1]
Length = 879
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/863 (52%), Positives = 613/863 (71%), Gaps = 29/863 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T K+ EA+ A A GH + HL +ALL G+ + + AG E +
Sbjct: 1 MDMNRLTQKSQEALQEAQTAAGRMGHTEVDGEHLLLALLDQEDGLIPRLLEQAGKE--PK 58
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ + + P T AP ++ + L ++ A+ K D +++V+ L+L L
Sbjct: 59 GLREAVREELSRRPKVTGPGAAPGQVFVTQRLAHLLDAAEREAKRLKDEYVSVEHLLLAL 118
Query: 118 LEDSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+S G L K+AG+ S + ++RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 119 AEESSSTAAGRLLKQAGITRDSFLSALTQVRGNQ--RVTSANPEVAYEALEKYGRDLVLE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A G+LDPVIGRD EIRRV +ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP
Sbjct: 177 ARSGRLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMG+LVAGAKYRGEFEERLKAVL EV+ A+G+++LF+DE+H V+GAG EG
Sbjct: 237 LRDRTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQGRILLFVDELHTVVGAGAAEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L +GATTL+EYRK++EKDAA ERRFQQV V EPSV DT+SILR
Sbjct: 297 AMDAGNMLKPMLARGELHMVGATTLDEYRKHIEKDAALERRFQQVLVEEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E+ E HGV+IQD ALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 357 GLRERLEVFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ +LEIE AL KE D ASK RL E+R+EL DLR + +++ E++ I
Sbjct: 417 LDEITRRVTRLEIEDAALSKETDPASKTRLEELRRELADLRGEADAKHAQWEAERQAIRR 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLML 528
++ L+Q+ E++ +EAER YDL RAA+LRYG++Q++E + QL Q +N +L
Sbjct: 477 VQELRQELEQVRHEAEEAERAYDLNRAAELRYGSLQDLERRLAAEEEQLAAKQG-QNRLL 535
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRS 577
E V ++IAE+V+ WTG+PV RL + E +ER+IG EAV V ++++R+
Sbjct: 536 REVVTEEEIAEIVAAWTGVPVARLQEGEREKLLRLDEILRERVIGQDEAVKLVTDAIIRA 595
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E +VR+DMSEY E+H+VSRL+
Sbjct: 596 RSGIRDPRRPIGSFIFLGPTGVGKTELAKTLARTLFDSEENMVRLDMSEYQERHTVSRLM 655
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQ+LDDGR+TD QGRTV
Sbjct: 656 GAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRTV 715
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
DFRNTVIIMTSN+G+EHLL G + ++ AR V+ E+R HFRPE LNR+D+IV+F P
Sbjct: 716 DFRNTVIIMTSNIGSEHLLDGATAEGEIKPDARALVMGELRGHFRPEFLNRVDDIVLFKP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L Q+ ++ LQ ++ RLAER + + ++D A ++ + YDP+YGARP+RR++ +V
Sbjct: 776 LGERQIERIVELQFDELRRRLAERRITVELSDVARQVIAHQGYDPVYGARPLRRYISHEV 835
Query: 817 VTELSRMLVREEIDENSTVYIDA 839
T + R L+R ++ + +TV +DA
Sbjct: 836 ETLVGRALLRGDVQDGATVRVDA 858
>gi|28210275|ref|NP_781219.1| clpB protein [Clostridium tetani E88]
gi|54035838|sp|Q898C7.1|CLPB_CLOTE RecName: Full=Chaperone protein ClpB
gi|28202711|gb|AAO35156.1| clpB protein [Clostridium tetani E88]
Length = 865
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/866 (49%), Positives = 618/866 (71%), Gaps = 24/866 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ +K T K + I + ++A H Q P HL AL+ G+ + N +
Sbjct: 1 MDIEKLTLKVQQTINDSQKIAVKYNHQQLEPFHLFAALVFQEDGLIPNILGKMNINIKVL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+R N+ M K+ + A+ + ++ RA++ K D++++V+ ++L L+
Sbjct: 61 RDEIKRELNE-MPKVLGDGAQNSGVYATRSFEEIFIRAESIAKDFKDSYISVEHIMLSLM 119
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ + I + + + + + ++++RG + +V++ + T++AL YGR+L+E A
Sbjct: 120 QGRSTSIKKILDKFNIRKDKFLNVLQQVRGNQ--RVDTQDPEGTYEALVKYGRNLIEDAK 177
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRR+VRILSRRTKNNPVLIG+PGVGKTA++EGLA+RIVRGDVP L
Sbjct: 178 KHKLDPVIGRDEEIRRIVRILSRRTKNNPVLIGDPGVGKTAIIEGLAERIVRGDVPEGLK 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMGAL+AGAK+RGEFEERLKAVLKEVE ++GK+ILFIDEIH ++GAG+TEGSM
Sbjct: 238 NKIIFSLDMGALIAGAKFRGEFEERLKAVLKEVENSQGKIILFIDEIHNIVGAGKTEGSM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT +EYRKY+EKD A ERRFQ V + EP+V DT+SI+RGL
Sbjct: 298 DAGNLIKPMLARGELNCIGATTFDEYRKYIEKDKALERRFQPVIIDEPTVEDTISIIRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHG+RI D A+V AA+LS RYIT R+LPDKAIDL+DEA A +R ++DS P E+D
Sbjct: 358 KERFEIHHGIRIHDSAIVAAAKLSQRYITDRYLPDKAIDLIDEAGAMIRTEIDSLPTELD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+++RK Q+EIE AL KEKD SK RL ++ KEL +L++K + + +Y+KEKE+I +R
Sbjct: 418 SIKRKIFQMEIEKEALAKEKDSRSKERLEDLEKELSNLKEKDKEMTAKYEKEKEQIINMR 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLMLTETV 532
LKQK +E+ L++AER YDL + A+L+YG I +++ I + E ++ + ML E V
Sbjct: 478 NLKQKLDEVKGQLEKAEREYDLNKVAELKYGIIPGIKSQIEEKEILIKENSQGNMLKEEV 537
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
++I++++S WTGIPVT+L + EK++L IG EAV AV+ +VLR+RAG+
Sbjct: 538 TENEISKIISHWTGIPVTKLIEGEKDKLLRLEDELKSRVIGQDEAVEAVSNAVLRARAGM 597
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
PQ+P GSF+FLGPTGVGKTELAK L + LFD E ++RIDMSEYME++SVSRLIGAPP
Sbjct: 598 KDPQKPIGSFIFLGPTGVGKTELAKTLCKNLFDSEENIIRIDMSEYMEKYSVSRLIGAPP 657
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF+N
Sbjct: 658 GYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKTVDFKN 717
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IIMTSN+G+ +LL + +++V ++ F+PE LNRLD+I++F PL++ +
Sbjct: 718 CIIIMTSNIGSSYLLENKKEDGIDETVKNKVSNALKDRFKPEFLNRLDDIIMFKPLTNRE 777
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ + ++D+ RL +R + L VT+ A +++ E YD IYGARP++R++E + T+++
Sbjct: 778 ITKIIDIFLQDIENRLKDRNITLIVTENAKELMAKEGYDAIYGARPLKRYIENILETKIA 837
Query: 822 RMLVREEIDENSTVYIDASPKGDNLV 847
+ +++ +I E + +D KG+ ++
Sbjct: 838 KQIIKGDIYEGCKIGVDI--KGEEII 861
>gi|290990915|ref|XP_002678081.1| heat shock protein 101 [Naegleria gruberi]
gi|284091692|gb|EFC45337.1| heat shock protein 101 [Naegleria gruberi]
Length = 891
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/875 (50%), Positives = 624/875 (71%), Gaps = 45/875 (5%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSG-------IFAQAINNA 53
MNPDKFT KTN+ I+ A+ +A H +PLH+A A++ +P + + ++
Sbjct: 1 MNPDKFTDKTNQTISDAYMMAKDRKHIFISPLHVA-AVIFNPDDKQSLGFLVCKKVSSSQ 59
Query: 54 GGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQL 113
+ + A+ + N K+ Q P +++ + L+ V++ A+ + D LAVD +
Sbjct: 60 KTIDCNKIADELKNAMNTKISVQDPPVEDLAPNRRLVSVLQAAEKIKDQLDDHLLAVDHV 119
Query: 114 ILGLLEDSQIGD-LFKEAGVAVAR--VKSEVEKLRGKEGRKVESASGDTTFQALKTYGRD 170
+L L++DS + + + K + + +K + +RG G+KV+S +T + AL YG +
Sbjct: 120 LLALMDDSDVSNAILKATNNQLTKQVLKDTLALIRG--GKKVDSKQAETGYDALNRYGVN 177
Query: 171 LVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD 228
+V+ A GK DP+IGRD+E+ R++R+LSRRTKNN L+ EPGVGK+A+VEGLA RI GD
Sbjct: 178 MVDMARQGKYDPLIGRDKELARMIRVLSRRTKNNCCLLAEPGVGKSALVEGLAMRIATGD 237
Query: 229 VPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAG 288
VP NL +L +LD+G++VAG+K+RGEFEERLK++LKEVEE+ G VILFIDEIH + GAG
Sbjct: 238 VPKNLQ-TQLYSLDLGSMVAGSKFRGEFEERLKSILKEVEES-GDVILFIDEIHTLSGAG 295
Query: 289 RT-EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDT 347
T + S+DA+N+ KP+LARG LR IGATT EYRKY+EKDAA ERRFQ VY+AEP+V +T
Sbjct: 296 STGDNSLDASNMIKPLLARGVLRLIGATTPTEYRKYIEKDAALERRFQPVYLAEPNVQET 355
Query: 348 VSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLD 407
+SILRGLK +YE HHGVRI D A+V AA+LSARYI GR+ PDK+IDL+DEA AN+RVQL+
Sbjct: 356 ISILRGLKSRYEAHHGVRILDSAIVEAARLSARYIQGRYNPDKSIDLIDEASANIRVQLN 415
Query: 408 SQPEEIDNLERKRMQLEIELHALEKEK---DKASKARLVEVRKELDDLRDKLQPLMMRYK 464
S+PE ID LERK++QL++E ALEKEK D+ +K RL +V+ E+ + ++L+P+ ++Y+
Sbjct: 416 SRPEIIDTLERKKLQLQVEATALEKEKNYSDEKTKQRLEQVKNEISKVDEELKPIKLKYE 475
Query: 465 KEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE------ 518
E ++E+R QK E+L + +AE RYDLA A+DL+YGAI E+E +I L+
Sbjct: 476 AETSLVNELREKNQKLEKLKAKMVDAEARYDLALASDLKYGAIPEIEESIQSLKKKIEQK 535
Query: 519 -----GNQSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIG 562
N + M ++ V P+QI EV++RWTGIPV RL ++EK+ R++G
Sbjct: 536 EEDDRKNGVNSANMTSDVVTPEQINEVIARWTGIPVQRLNESEKDKVLKLEERLMKRVVG 595
Query: 563 LAEAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRI 622
+A+ +++ES++RS+AGL P +P GSFLFLG +GVGKT LAK++A +LFDDE +VRI
Sbjct: 596 QEDAIKSLSESIIRSKAGLSNPNKPIGSFLFLGSSGVGKTYLAKSIAYELFDDEKHMVRI 655
Query: 623 DMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQ 682
DMSE MEQHSVSRLIG+P GYVG+ + QLTE VRR+PY+VVLFDE+EKAH V N LLQ
Sbjct: 656 DMSELMEQHSVSRLIGSPAGYVGYSDDNQLTEPVRRQPYTVVLFDEIEKAHPRVLNVLLQ 715
Query: 683 VLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRP 742
+LDDGRLTDGQGRTVDF+NTVIIMTSN+G++H L+ M + + QV+ EVR+HF P
Sbjct: 716 LLDDGRLTDGQGRTVDFKNTVIIMTSNIGSKHFLT--MNDNNKETVKKQVMNEVRQHFTP 773
Query: 743 ELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPI 802
E LNRLD+I+ F+PL+ + L V RLQM+ + RL ER +++ + D+A ++V++E +DP
Sbjct: 774 EFLNRLDDILFFEPLTSKHLVNVVRLQMESLTERLKERDISIDIRDSACELVISEGFDPN 833
Query: 803 YGARPIRRWLEKKVVTELSRMLVREEIDENSTVYI 837
YGARP+ R+++K +VTELS+++++ E+ + S + I
Sbjct: 834 YGARPLARFIQKHIVTELSKLMLKGELRDGSQIVI 868
>gi|188582962|ref|YP_001926407.1| ATP-dependent chaperone ClpB [Methylobacterium populi BJ001]
gi|179346460|gb|ACB81872.1| ATP-dependent chaperone ClpB [Methylobacterium populi BJ001]
Length = 874
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/861 (53%), Positives = 599/861 (69%), Gaps = 23/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + + A LA G+ Q P HL LL DP G+ A I+ AGG++
Sbjct: 1 MNFEKYTERARGFVQAAQNLAVREGNPQLAPGHLLKVLLDDPEGLCAGLIDRAGGQSRVA 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A+ Q + K P + + A+ L+++ A+ A + GD+++ V++L+L
Sbjct: 61 HAQ--VEQWIAKQPKVSGNAAQPQATRELVRLFDTAEQAAEKAGDSYVTVERLLLAFAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+D + G + AGV A + + + LR +GR ++AS + + ALK Y RDL E A G
Sbjct: 119 KDGEAGRILTAAGVTAASLNAAINALR--KGRTADNASAENAYDALKKYARDLTEAAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L +
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKEK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
L+ALDMGAL+AGAKYRGEFEERLK VL EV AEG++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 NLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGQIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+DN+
Sbjct: 357 KYEQHHGVRIQDSALVAAATLSNRYITDRFLPDKAIDLVDEAGSRLRMQVDSKPEELDNV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ ++L+IE AL+KE D AS+ RL + KEL DL ++ + R+K EK+++ L
Sbjct: 417 DREIVRLKIEGEALKKETDSASRDRLQRLEKELADLEEQSATITARWKAEKDKLGAAAEL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI---GQLEGNQSDENLMLTETVG 533
K+K +E L A+R+ RA +L YG I +E + + + M+ E V
Sbjct: 477 KKKLDEARNDLAAAQRQGQYQRAGELAYGVIPGLEKQLAEIEAAAESAVARDGMVEEAVT 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
P IA VVSRWTG+PV ++ + E+E R++G EAV AV+ +V R+RAGL
Sbjct: 537 PQHIAGVVSRWTGVPVDKMLEGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQ 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTEL KALA LFDD+ LVRIDMSEYME+H+V+RLIGAPPG
Sbjct: 597 DPNRPIGSFMFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVARLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 657 YVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++IMTSNLGAE+L++ G+ T V RD+V+ VR HFRPE LNR+DEI++F L+ ++
Sbjct: 717 LLIMTSNLGAEYLVNQPAGQDTNAV-RDEVMGVVRGHFRPEFLNRVDEIILFHRLARSEM 775
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ +A L +R + + V D A + + YDP YGARP++R ++K V L+
Sbjct: 776 GAIVDIQLGRLAKLLEDRKITIDVDDEARTWLADKGYDPAYGARPLKRVIQKNVQDPLAE 835
Query: 823 MLVREEIDENSTVYIDASPKG 843
++ I + TV I P G
Sbjct: 836 AILSGVIHDGETVPIRVGPAG 856
>gi|295109439|emb|CBL23392.1| ATP-dependent chaperone ClpB [Ruminococcus obeum A2-162]
Length = 860
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/857 (52%), Positives = 608/857 (70%), Gaps = 27/857 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ +A+ ++A G+ + HL ALL+ + + I E
Sbjct: 1 MNISKFTQKSVQAVQDLEKVAYEYGNQEVEQEHLLYALLTQEDSLILKLI-----EKMDI 55
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ E N K L ++ ++ L K + A+ KA GD +++V+ L L LL
Sbjct: 56 NKEYFINVVKKALDAKVKVSGGDLRFGQYLNKSLVNAENEAKAMGDEYVSVEHLFLSLLT 115
Query: 120 DSQIG--DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
G +F E G+ R + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 116 QPSPGMKKIFDEFGITRERFLQALSTVRGNQ--RVVSDNPEATYDTLNKYGEDLVEKARN 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR +VRILSR+TKNNPVLIGEPGVGKTA +EGLAQRIV GDVP L D
Sbjct: 174 QKLDPVIGRDAEIRNIVRILSRKTKNNPVLIGEPGVGKTAAIEGLAQRIVAGDVPEGLKD 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
++ ALDMGALVAGAKYRGEFEERLKAVL+EV ++EG++ILFIDE+HL++GAG+T+G+MD
Sbjct: 234 KKIFALDMGALVAGAKYRGEFEERLKAVLEEVRKSEGEIILFIDELHLIVGAGKTDGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA RRFQ V V EP+V DT+SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALARRFQPVMVDEPTVEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 ERYEVFHGVKITDSALVAAATLSHRYITDRFLPDKAIDLVDEACALIKTELDSMPTELDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
RK MQLEIE AL+KE D SK RL E++KEL ++RD ++ EK ++++++
Sbjct: 414 QRRKIMQLEIEESALKKETDNLSKERLAELQKELAEMRDTFNTQKAQWDNEKHSVEKLQK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAA--IGQLEGNQSDENLMLTETVG 533
L+++ E++ +Q+A++ YDL +AA+L+YG + +++ I + + +SD +L + E V
Sbjct: 474 LREQIEDINKQIQKAKQNYDLEKAAELQYGELPKLQQQLEIEEKQVKESDRSL-VHEAVT 532
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLG 582
D+IA ++SRWTGIPVT+L + E+ +L+GL E V V +++LRS+AG+
Sbjct: 533 DDEIARIISRWTGIPVTKLTEGERTKLLGLEDELHKRVIGQNEGVRLVTDAILRSKAGIK 592
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAK LA LFDDE +VRIDMSEYME++SVSRLIGAPPG
Sbjct: 593 DPSKPIGSFLFLGPTGVGKTELAKTLAATLFDDEQNMVRIDMSEYMEKYSVSRLIGAPPG 652
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT
Sbjct: 653 YVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNT 712
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
++IMTSN+G+ +LL G+ K ++ A++QV+ ++R HFRPE LNRLDEI++F PL+ E
Sbjct: 713 ILIMTSNIGSPYLLDGIDEKGEIKPEAQEQVMNDLRGHFRPEFLNRLDEIIMFKPLTKEN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L +K+++ RLA++ ++L +TDAA V+ YDPIYGARP++R+L+ V T ++
Sbjct: 773 IGGIVDLMVKELSDRLADQELSLELTDAARTQVIENGYDPIYGARPLKRYLQNYVETLVA 832
Query: 822 RMLVREEIDENSTVYID 838
+ ++ ++ + T+ +D
Sbjct: 833 KKILSGDVHQGDTLVLD 849
>gi|220908358|ref|YP_002483669.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 7425]
gi|219864969|gb|ACL45308.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 7425]
Length = 872
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/860 (51%), Positives = 619/860 (71%), Gaps = 29/860 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSD---PSGIFAQAINNAGGENA 58
NP++FT K EAI E+ + Q HL ALL S IF +A G N
Sbjct: 5 NPNQFTEKAWEAIVRTPEIVKQSQQQQIESEHLIKALLEQDGLASNIFTKA-----GVNV 59
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ +R ++ + + P + + +L ++ RA +K + D ++++ LIL
Sbjct: 60 QRLRDRA-DEFIDRQPKLSNPSSSVFLGRSLDTLLDRADQFRKQYSDEFISIEHLILSYP 118
Query: 119 EDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D ++G L +E G+ ++K V+++RG + KV + + + +L+ YGRDL + A
Sbjct: 119 QDDRLGKALLQEFGLDERKLKEVVDQIRGSQ--KVTDQNPEGKYASLEKYGRDLTQLARQ 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ DVP +L D
Sbjct: 177 GKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIARDVPESLRD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LIALDMGAL+AGAKYRGEFEERLKAVLKEV E+ G++ILFIDEIH V+GAG T+G+MD
Sbjct: 237 RQLIALDMGALIAGAKYRGEFEERLKAVLKEVTESGGQIILFIDEIHTVVGAGATQGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVY+ +PSV DT+SILRGLK
Sbjct: 297 ASNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYIDQPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGV+I D ALV AA LS+RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D
Sbjct: 357 ERYEVHHGVKISDNALVAAASLSSRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +LEKE AS+ RL + KEL DL+ + L +++ EK+ ID+++
Sbjct: 417 IDRKILQLEMERLSLEKESSAASRERLERLEKELADLKQEQTSLNAQWQGEKQIIDQLQA 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTET 531
+K++ E+L +Q+AER +D +AA L++G + + +E QL Q+ ML E
Sbjct: 477 IKEEIEQLNVQIQQAERDFDYNKAAKLKFGQLTDLQRRLEETETQLAQAQTSGKTMLREE 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V IAE++S+WTGIP+++L ++E ++L IG EAV AVA+++ RSRAG
Sbjct: 537 VTEADIAEIISKWTGIPISKLVESEMQKLLHLEDELHRRVIGQEEAVTAVADAIQRSRAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+HSVSRL+GAP
Sbjct: 597 LADPNRPIASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDMSEYMEKHSVSRLVGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEA+RRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF+
Sbjct: 657 PGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGRTVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NTVIIMTSN+G++++L +++V++ +R FRPE LNR+DEI++F L +
Sbjct: 717 NTVIIMTSNIGSQYILDLAGDDSRYAEMQERVMEAMRASFRPEFLNRIDEIIIFHSLRKD 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+LR++ +LQ++ + RL++R ++L ++++ALD + YDP++GARP++R +++++ T +
Sbjct: 777 ELRQIVKLQVQRLEQRLSDRKMSLKLSESALDFLAEVGYDPVFGARPLKRAIQRELETPI 836
Query: 821 SRMLVREEIDENSTVYIDAS 840
++ ++R E + T+++D +
Sbjct: 837 AKSILRGEFHDGDTIFVDVA 856
>gi|399924804|ref|ZP_10782162.1| protein disaggregation chaperone [Peptoniphilus rhinitidis 1-13]
Length = 860
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/869 (50%), Positives = 619/869 (71%), Gaps = 27/869 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ A+ +A G+ + +H+ ALL D G+ + +
Sbjct: 1 MNFEKFTQKSLEAVQGAYNIAKEYGNPEVKEIHINYALLDDKEGLIPRVLTYMEKNPEMI 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
A+ + + +++LP Q+ + E+ A + ++ +A+ K GD +L+V+ + L LL
Sbjct: 61 KADVL--KIIERLPKQSGS--EVYADNSYRELFTKAEDFMKKMGDEYLSVEHIYLALLNM 116
Query: 121 SQIGD--LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
G +F + + + ++K+RG + ++ G T+ ALK YG+DL E A G
Sbjct: 117 KGTGSSSIFNKYKIDADSFLNSLKKIRGNQHVTTDNPEG--TYDALKKYGQDLTELARDG 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEE+R V+RILSRRTKNNPVLIG PGVGKTA+ GLAQRIV DVP L +
Sbjct: 175 KLDPVIGRDEEVRNVIRILSRRTKNNPVLIGPPGVGKTAIAGGLAQRIVSEDVPEGLKNK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMGAL+AGAKYRGEFEERLKAVL EV+++EG +ILFIDEIH ++GAG+T+G+MDA
Sbjct: 235 TVFSLDMGALIAGAKYRGEFEERLKAVLNEVKKSEGNIILFIDEIHNIVGAGKTDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KPMLARG+L IGATTL+EYRKY+EKD A ERRFQ+V V EP+V DT++ILRGLK+
Sbjct: 295 SNLLKPMLARGELHAIGATTLDEYRKYIEKDPALERRFQKVLVKEPTVEDTIAILRGLKD 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE +HG+RI D A++ AA LS RYIT R LPDKAIDL+DE+CA +R ++DS P EID +
Sbjct: 355 KYEIYHGIRIADSAVIAAATLSDRYITDRFLPDKAIDLMDESCAMLRTEIDSMPTEIDEV 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK +QLEIE AL+KE D+AS RL +++ EL + +D L +++ EK+ +D + +
Sbjct: 415 RRKILQLEIENQALKKETDEASIERLKKLQVELSEEKDLFDRLKSKWESEKKALDSTKDI 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL-MLTETVGPD 535
K++ EE +++EAER YDL + ++L+YG + +++ + + E DE+ M+ E V D
Sbjct: 475 KKQIEETNHSIEEAERNYDLEKLSELKYGTLPKLKEELAKKESETKDESTSMVKEQVTED 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGRP 584
+IA VVSRWTGIPV +L + E+E+L+ L + A+ V+++VLR+RAGL
Sbjct: 535 EIAYVVSRWTGIPVEKLNKTEREKLLNLEDILHKRVIGQDNAIEVVSDAVLRARAGLKDR 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTE AKAL E LFDDE L+RIDMSEYME+HSVSRL+G+PPGYV
Sbjct: 595 NKPIGSFIFLGPTGVGKTETAKALTETLFDDERNLIRIDMSEYMEKHSVSRLVGSPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQVLDDGRLTD QGRTVDF+NTVI
Sbjct: 655 GYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDNQGRTVDFKNTVI 714
Query: 705 IMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+ L+ G+ G++T + AR+ V+ ++R FRPE LNR+DEIV+F PL E++
Sbjct: 715 IMTSNIGSHFLIDGIGEDGQIT-EDARESVMGDLRASFRPEFLNRVDEIVLFKPLQREEI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ + +++V +L +R + + VTD+AL+ +L S+ P YGARP++R++E + T++S+
Sbjct: 774 YDIIKQSIREVENKLEDRDIKIEVTDSALEFILNASFSPQYGARPVKRYIEHALETKISK 833
Query: 823 MLVREEIDENSTVYIDASPKGDNLVYRVQ 851
++++ ++ + T+ +D D+L +V+
Sbjct: 834 LIIKGDVMDGDTILVDVY--ADDLSIKVK 860
>gi|313679327|ref|YP_004057066.1| ATP-dependent chaperone clpb [Oceanithermus profundus DSM 14977]
gi|313152042|gb|ADR35893.1| ATP-dependent chaperone ClpB [Oceanithermus profundus DSM 14977]
Length = 855
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/857 (53%), Positives = 611/857 (71%), Gaps = 27/857 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T ++ EA+A A LA GH Q H+ V L DPSG+ ++ + AG + +
Sbjct: 1 MNLEKWTAQSREALAQAQVLARELGHQQIDLPHMVVVLFRDPSGLPSRLLERAGRD--PK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
A N+ + LP A S L +V++RA+ +A GD +A+D L+L + E+
Sbjct: 59 EAVEAANKELAGLPKVQGAEGGQYLSQRLDRVLKRAEQLAEAQGDKFVALDILLLAVAEE 118
Query: 121 SQIGDLFKEAGVAVA-RVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ G+ A +K ++++RG GR VES G+ TF+AL YG DL E A GK
Sbjct: 119 NF-------PGLPPADELKKIIDEVRG--GRTVESEHGEGTFEALAQYGIDLTELAEQGK 169
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR ++IL RRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L + R
Sbjct: 170 LDPVIGRDEEIRRTIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSGDVPEGLKEKR 229
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+IAL MG+L+AGAKYRGEFEERLKAV+ E +EG++ILFIDE+H ++GAG+ EG++DA
Sbjct: 230 IIALQMGSLLAGAKYRGEFEERLKAVIAEATASEGRIILFIDELHTIVGAGKAEGAVDAG 289
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+LR IGATTL+EYR+ +EKDAA ERRFQ V V EPSV DT+SILRG+KEK
Sbjct: 290 NMLKPALARGELRLIGATTLDEYRE-IEKDAALERRFQPVLVDEPSVEDTISILRGIKEK 348
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D A+V AA LS RYI+ R LPDKAIDL+DEA A +R+QL+SQPEEID LE
Sbjct: 349 YEVHHGVRISDPAIVAAATLSHRYISDRRLPDKAIDLIDEAAARLRMQLESQPEEIDQLE 408
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK++QLEIE AL+KE D SKARL E+ KE+ +L +K++ + ++ E E ++E+R +
Sbjct: 409 RKKLQLEIEREALKKETDPDSKARLEEIEKEIAELTEKIEAMKAEWQAEVEILNELREKQ 468
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
++ +EL ++ A+R YDL +AA+L+YG + ++E + +L D + E D I
Sbjct: 469 KELDELRTQIELAQRNYDLNKAAELQYGVLPKLEEEVNRLSEKLKDAKYVRLEVTEED-I 527
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEVVSRWTGIPV +L + E+E+L +G EA+ +VA+++ R+RAGL P +
Sbjct: 528 AEVVSRWTGIPVAKLLEGEREKLLRLEDELHKRVVGQDEAIQSVADAIRRARAGLKDPNR 587
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSF+FLGPTGVGKTELAK LAE LFD E ++RIDM+EYME+HSV+RLIGAPPGYVG+
Sbjct: 588 PIGSFMFLGPTGVGKTELAKTLAETLFDTEEAMIRIDMTEYMEKHSVARLIGAPPGYVGY 647
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGRLTD GR VDFRNTVIIM
Sbjct: 648 EEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRVVDFRNTVIIM 707
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSN+G+ +L G+ + + +++V +++HFRPE LNRLD+I+VF PL+ EQ+ ++
Sbjct: 708 TSNMGSHLILDGIKEGLPYERIQERVFAVLQEHFRPEFLNRLDDIIVFKPLTREQIIEIV 767
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q+ + RLAER + L +TD A + YDP++GARP++R ++K++ T L++ ++
Sbjct: 768 EIQVAGLKQRLAERRITLELTDEAKRWLGERGYDPVFGARPLKRVIQKELETPLAKEILA 827
Query: 827 EEIDENSTVYIDASPKG 843
+ E TV + +G
Sbjct: 828 GNVREGDTVLVKVGERG 844
>gi|302556316|ref|ZP_07308658.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
gi|302473934|gb|EFL37027.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
Length = 879
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/862 (53%), Positives = 614/862 (71%), Gaps = 29/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T K+ EA+ A A G + HL +ALL G+ + + AG E
Sbjct: 1 MDMNRLTQKSQEALQEAQTAAVRMGQTEVDGEHLLLALLDQEDGLIPRLLQGAGREPEEL 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
A + + + P T AP ++ + L +++ A+ K D +++V+ L+L L
Sbjct: 61 RA--AVREELSRRPKVTGPGAAPGQVFVTQRLSRLLDAAEREAKRLKDEYVSVEHLLLAL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ + G L KE G+ S + ++RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 119 AEEGSATAAGRLLKEHGITRDSFLSALTQIRGNQ--RVTSANPEVAYEALEKYGRDLVAE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRRV +ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP
Sbjct: 177 ARDGKLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMG+LVAGAKYRGEFEERLKAVL EV+ A+G+++LF+DE+H V+GAG EG
Sbjct: 237 LRDKTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQGRILLFVDELHTVVGAGAAEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA + KPMLARG+L IGATTL+EYRK++EKDAA ERRFQQV V EPSV DT+SILR
Sbjct: 297 AMDAGQMLKPMLARGELHMIGATTLDEYRKHIEKDAALERRFQQVLVDEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E+ E HGV+IQD ALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 357 GLRERLEIFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ +LEIE AL KE D ASK RL E+RKEL DLR + +++ E++ I
Sbjct: 417 LDEITRRVTRLEIEEAALSKETDPASKTRLEELRKELADLRSEADAKHAQWEAERQAIRR 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLML 528
++ L+Q+ E++ +EAER YDL RAA+LRYG +Q++E + QL Q EN +L
Sbjct: 477 VQELRQELEQVRHEAEEAERAYDLNRAAELRYGRLQDLERRLAAEEEQLAAKQG-ENRLL 535
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRS 577
E V ++IAE+V+ WTG+PV RL + E +ER+IG EAV VA++++R+
Sbjct: 536 REVVTEEEIAEIVAAWTGVPVARLQEGEREKLLRLDEILRERVIGQDEAVKLVADAIIRA 595
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E+ +VR+DMSEY E+H+VSRL+
Sbjct: 596 RSGIRDPRRPIGSFIFLGPTGVGKTELAKTLARALFDSEDNMVRLDMSEYQERHTVSRLM 655
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQ+LDDGR+TD QGRTV
Sbjct: 656 GAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRTV 715
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
DFRNTVIIMTSN+G+EHLL G+ + ++ AR V+ E+R HFRPE LNR+D+IV+F P
Sbjct: 716 DFRNTVIIMTSNIGSEHLLDGVTAEGEIKPDARALVMGELRGHFRPEFLNRVDDIVLFKP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L +Q+ ++ LQ ++ RLAER + + +T+ A +++ + YDP+YGARP+RR++ +V
Sbjct: 776 LGEQQIERIVELQFDELRRRLAERRITVELTEEARELIAHQGYDPVYGARPLRRYISHEV 835
Query: 817 VTELSRMLVREEIDENSTVYID 838
T + R L+R ++ + +TV +D
Sbjct: 836 ETLVGRALLRGDVQDGATVRVD 857
>gi|429763360|ref|ZP_19295712.1| ATP-dependent chaperone protein ClpB [Anaerostipes hadrus DSM 3319]
gi|429178936|gb|EKY20201.1| ATP-dependent chaperone protein ClpB [Anaerostipes hadrus DSM 3319]
Length = 861
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/871 (50%), Positives = 629/871 (72%), Gaps = 31/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ EA+ ++A GH + H +LL+ + A + G
Sbjct: 1 MNINKFTQKSIEAVNQCEKIAYDHGHQEIDQEHFLYSLLTIDDSLIASLLEKMG------ 54
Query: 61 SAERVFNQAMKKLPSQTP--APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ F +++L ++ P + ++ S L +V+ + KA D +++V+ L L ++
Sbjct: 55 INKETFLSQVQELLNKKPKVSGGQVYMSNDLNQVLLHGEDEMKAMKDEYVSVEHLFLAMI 114
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ + + +LF+ G+ R + ++RG G+KV S + + T+ +L+ YG DLV++A
Sbjct: 115 KHPNKAVKELFRAYGITRDRFLQVLSQIRG--GQKVTSDNPEETYDSLEKYGYDLVKRAR 172
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
KLDPVIGRD EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L
Sbjct: 173 EQKLDPVIGRDSEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPDQLK 232
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + +LDMG+LVAGAKYRGEFEERLKAVL+EV++++G++ILFIDE+H ++GAG+T+G+M
Sbjct: 233 DKTIFSLDMGSLVAGAKYRGEFEERLKAVLEEVKKSDGQIILFIDELHTIVGAGKTDGAM 292
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQ V V +P+V DT+SILRG+
Sbjct: 293 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDQALERRFQPVMVDQPTVEDTISILRGI 352
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
K++YE +HGV+I D +LV AA LS RYIT R LPDKAIDLVDEACA ++ +++S P E+D
Sbjct: 353 KDRYEVYHGVKITDSSLVAAATLSNRYITDRFLPDKAIDLVDEACAMIKTEMNSLPAELD 412
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
++RK MQ+EIE AL+KE D+ SK RL E++KEL ++R+ + R++ EK ++++
Sbjct: 413 EVQRKIMQMEIEEAALKKEDDRLSKERLEELQKELAEMREDFKARKARWENEKASVEKVS 472
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN-LMLTETVG 533
+L+++ E + +Q A+R YDL +AA+L+YG + E++ + + E + E+ M+ E+V
Sbjct: 473 KLREEIESVNSEIQIAQRNYDLNKAAELQYGRLPELKKQLEEEEERVAKEDRSMVRESVT 532
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
D+IA+++SRWTGIPV +L ++E+ ER++G EAV V ES++RS+AG+
Sbjct: 533 EDEIAKIISRWTGIPVAKLTESERNKTLHLDKILHERVVGQDEAVELVTESIIRSKAGIK 592
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAKALAE LFD+E +VRIDMSEYME+HSV+RLIGAPPG
Sbjct: 593 DPSKPIGSFLFLGPTGVGKTELAKALAESLFDNEQNIVRIDMSEYMEKHSVARLIGAPPG 652
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD +G+TVDF+NT
Sbjct: 653 YVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRITDSKGKTVDFKNT 712
Query: 703 VIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
++IMTSN+G+ +LL G+ G + + A+D V+ +++ HFRPE LNRLDE ++F PL+
Sbjct: 713 ILIMTSNIGSSYLLEGIDEDGNIKPE-AQDMVMNDLKNHFRPEFLNRLDETIMFKPLTKA 771
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + L +K++ RLA++ +++ +T AA + V Y+P+YGARP++R+L+K V T
Sbjct: 772 NITNIIDLLVKNLNRRLADKELSVELTSAAKNYVADHGYEPMYGARPLKRYLQKSVETLA 831
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+R+++ + +D T+ ID + D L+ +V+
Sbjct: 832 ARLILSDGVDAEDTILIDV--ENDQLIAKVK 860
>gi|228938389|ref|ZP_04100999.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228971268|ref|ZP_04131896.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977878|ref|ZP_04138259.1| Chaperone protein clpB 1 [Bacillus thuringiensis Bt407]
gi|384185188|ref|YP_005571084.1| ClpB protein [Bacillus thuringiensis serovar chinensis CT-43]
gi|410673483|ref|YP_006925854.1| chaperone protein ClpB [Bacillus thuringiensis Bt407]
gi|452197498|ref|YP_007477579.1| ClpB protein [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|228781795|gb|EEM29992.1| Chaperone protein clpB 1 [Bacillus thuringiensis Bt407]
gi|228788418|gb|EEM36369.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821251|gb|EEM67266.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326938897|gb|AEA14793.1| ClpB protein [Bacillus thuringiensis serovar chinensis CT-43]
gi|409172612|gb|AFV16917.1| chaperone protein ClpB [Bacillus thuringiensis Bt407]
gi|452102891|gb|AGF99830.1| ClpB protein [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 866
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/874 (52%), Positives = 627/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
QSAE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQSAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFARLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLAER + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLAERHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|153008374|ref|YP_001369589.1| ATPase [Ochrobactrum anthropi ATCC 49188]
gi|151560262|gb|ABS13760.1| ATPase AAA-2 domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 873
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/854 (52%), Positives = 604/854 (70%), Gaps = 21/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ + I AGG A
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHVLKVLVDDDEGLASSLIERAGGRIA-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A++KLP + D++ S L KV A+ GD+ + V++L++ L
Sbjct: 59 DVRIGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLMALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + ++ +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNKVIKDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+++G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKSDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK R + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRFQRLEKELTDLEEESAELTSKWQSEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + + E +++ +L L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRSGEFQKAGELAYGKIPQLEKQLVEAESHENKGSL-LEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+++SRWTGIPV R+ + E+E+L IG EAV A++++V R+RAGL P
Sbjct: 536 VAQIISRWTGIPVDRMLEGEREKLLRMEDELAKRVIGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALAAFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + K ++ R++V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGEKDDVESVREEVMGVVRAAFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + + L +R + L + + A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQMLLTDRKIVLQLEEDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDA 839
+I + S V I A
Sbjct: 835 LGDILDGSIVKITA 848
>gi|240142543|ref|YP_002967054.1| putative ATP-dependent protease ATP-binding subunit
[Methylobacterium extorquens AM1]
gi|240012488|gb|ACS43713.1| Putative ATP-dependent protease ATP-binding subunit
[Methylobacterium extorquens AM1]
Length = 871
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/859 (52%), Positives = 605/859 (70%), Gaps = 23/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +++T + I A LAT G+ QFT LHL LL D G+ I+ AGG + +
Sbjct: 1 MNAERYTDRAKGFIQSAQSLATREGNQQFTSLHLLKVLLDDNEGLAGGLIDRAGGTSRSI 60
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
E A+ KLP + A ++ + L +V A+ GD+ + V++L+ L
Sbjct: 61 LGET--EAALAKLPKVSGAGSGQVYLAPDLARVFAAAEKIADKAGDSFVTVERLLQALAA 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D G L GV + + +E LR +GR +SAS + + ALK Y RDL + A
Sbjct: 119 DKDGDAGKLLARGGVGKQHLDAAIEALR--KGRTADSASAENAYDALKKYARDLTKAARE 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LD+G+L+AGAKYRGEFEERLKAVL+EV A G +ILFIDE+H+++GAG+T+G+MD
Sbjct: 237 KKLLSLDLGSLIAGAKYRGEFEERLKAVLQEVTSAAGGIILFIDEMHMLIGAGKTDGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D ALV A LS RYIT R LPDKAIDLVDEA A +++Q+DS+PEE+D+
Sbjct: 357 EKYELHHGVRIADSALVAATTLSNRYITDRFLPDKAIDLVDEASARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ ++ +IE AL+KE+D SK+RL ++ KEL +L K L +++ EK ++ + ++
Sbjct: 417 LDREIVRFKIEQEALKKERDAGSKSRLQKLDKELVELEKKSADLTSKWQAEKGKLSDAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
+K + ++L L A+R+ + +A +L YG I E+E + +E D+ +ETV D
Sbjct: 477 MKTELDQLRTELANAQRKGEFQKAGELAYGRIPELEKKLAAIEAG--DDASSFSETVTAD 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV R+ + EKE+L +G +AV AV+ +V R+RAGL P
Sbjct: 535 SIAQVVSRWTGVPVDRMLEGEKEKLLKMEEQLIKRVVGQTQAVRAVSTAVRRARAGLQDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTELAKALAE +FDDE +VRIDMSE+ME+HSV+RLIGAPPGYV
Sbjct: 595 NRPIGSFMFLGPTGVGKTELAKALAEFMFDDETAMVRIDMSEFMEKHSVARLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRN VI
Sbjct: 655 GYDEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVVI 714
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSN+GAE+L+ G+ T V RD+V+ VR HFRPE LNR+D I++F L ++ +
Sbjct: 715 ILTSNIGAEYLVKQPEGEKTNAV-RDKVMTMVRAHFRPEFLNRIDAIILFQRLQKAEMGR 773
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L +R +AL++ D + A+ ++P YGARP++R +++ V L+ M+
Sbjct: 774 IVDIQFGRLQKILDDRKIALSLDAKGRDWLAAKGWNPAYGARPLKRVIQRYVQDPLAEMI 833
Query: 825 VREEIDENSTVYIDASPKG 843
+ ++ + +TV I A G
Sbjct: 834 LTGDVRDGATVKISAGKDG 852
>gi|260434470|ref|ZP_05788440.1| ATP-dependent chaperone ClpB [Synechococcus sp. WH 8109]
gi|260412344|gb|EEX05640.1| ATP-dependent chaperone ClpB [Synechococcus sp. WH 8109]
Length = 862
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/858 (51%), Positives = 609/858 (70%), Gaps = 25/858 (2%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENA 58
M P ++FT + AI A +LA SA H Q HL +ALL +G+ + ++ AG +
Sbjct: 1 MQPTAEQFTEQAWAAIVAAQQLAHSARHQQLETEHLLLALLQQ-NGLAGRILSKAGVDVG 59
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A + +++ PS P+ + +L + RA+ A+ D+++A++ L+L L
Sbjct: 60 TFQA--AVDSHLRQQPSLGSPPESVFLGRSLNSCLDRAETARDGFSDSYIAIEHLMLALA 117
Query: 119 EDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D + G L +AGV +++K + +RG + V + + T+++L+ YGRDL A
Sbjct: 118 DDERCGRQLLSQAGVDTSKLKEAITAVRGNQ--TVTDQNPEGTYESLEKYGRDLTAAARD 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 176 GKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPQALQN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LIALDMGAL+AGAKYRGEFEERLKAVLKEV +EG+++LFIDEIH V+GAG T G+MD
Sbjct: 236 RQLIALDMGALIAGAKYRGEFEERLKAVLKEVTASEGQIVLFIDEIHTVVGAGATGGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KPMLARG+LRCIGATTL+E+R+++EKD A ERRFQQV V +PSV DT+SILRGLK
Sbjct: 296 ASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVNQPSVEDTISILRGLK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV AA LS+RYI R LPDKAIDLVDE+ A +++++ S+PEEID
Sbjct: 356 ERYEVHHGVRIADSALVAAAVLSSRYIADRFLPDKAIDLVDESAARLKMEITSKPEEIDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +L +E D AS+ RL + +EL DL ++ L +++KEK IDE+
Sbjct: 416 IDRKILQLEMEKLSLGRESDSASQERLQRIERELADLGEQQSSLNAQWRKEKGAIDELSS 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI----GQLEGNQSDENLMLTET 531
LK++ E + +++A+R YDL +AA+L YG + ++ + Q+ +S E +L E
Sbjct: 476 LKEEIERVQLQVEQAKRSYDLNKAAELEYGTLASLQKQLLEQDAQIASEESGEKGLLREE 535
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
V D IAEV+++WTGIP+ RL Q+E E R+IG +AV AVA+++ RSRAG
Sbjct: 536 VSEDDIAEVIAKWTGIPLARLVQSEMEKLLQLEDDLHQRVIGQHQAVTAVADAIQRSRAG 595
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P SFLFLGPTGVGKTEL+KALA +LFD ++ +VRIDMSEYME+H+VSRLIGAP
Sbjct: 596 LSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDDAMVRIDMSEYMEKHTVSRLIGAP 655
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+E GGQLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQG TVDF
Sbjct: 656 PGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGHTVDFT 715
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NTV+I+TSN+G++ +L +V +R HFRPE LNRLD+ ++F L E
Sbjct: 716 NTVLILTSNIGSQSILELASDPEQHGAMESRVNDALRAHFRPEFLNRLDDQIIFHSLRRE 775
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+LR++ LQ++ + RLAER + L+++D A D + YDP+YGARP++R +++++ T +
Sbjct: 776 ELRQIVTLQVERLRQRLAERKLELSLSDGAADWLANAGYDPVYGARPLKRAVQRELETPI 835
Query: 821 SRMLVREEIDENSTVYID 838
++ ++ E + ++
Sbjct: 836 AKAILAGRYSEGQAISVE 853
>gi|295093836|emb|CBK82927.1| ATP-dependent chaperone ClpB [Coprococcus sp. ART55/1]
Length = 858
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/854 (51%), Positives = 609/854 (71%), Gaps = 24/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DK+T K+ E + A E A + + T +HL LL + A+ G
Sbjct: 1 MEMDKYTRKSLEVVEKAKEKALEYDNQELTQMHLLAGLLEIDDSLIAKIFEKMGVN--VT 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
SA + +LP + + A K + +A+ K GDT+++V+ L LG+++
Sbjct: 59 SAVNAVEDKLARLPKVSGG--NMYAGNNFSKALIQAEKEAKQMGDTYVSVEHLFLGMVDK 116
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
DS I +L K GV+ E+ ++RG KV+S +++++A++ +G DLVE+A
Sbjct: 117 ADSDIKELLKGWGVSRNAFLKELAEIRG--NHKVDSDDPESSYEAMEKFGYDLVERARQQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRI+RGDVP L +
Sbjct: 175 KLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRILRGDVPEGLKNK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
++ ALDMGALVAGAKYRGEFEERLK VL EV+++EG+VI+FIDE+H ++GAG+T+G+MDA
Sbjct: 235 KIFALDMGALVAGAKYRGEFEERLKNVLDEVKKSEGEVIMFIDELHTIVGAGKTDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRG+KE
Sbjct: 295 GNMLKPMLARGELHCIGATTLNEYRQYIEKDAALERRFQPVMVDEPTVEDTISILRGIKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LDS P E+D +
Sbjct: 355 RYEVFHGVKISDGALVSAAVLSNRYITDRFLPDKAIDLVDEACAMIKTELDSMPVEVDEI 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK MQLEIE AL+KE+D SK RL +++ EL +L+D+ L +++ EK +++IR L
Sbjct: 415 TRKIMQLEIEETALKKEEDNLSKQRLADLQAELAELKDQANSLKAKWENEKAAVEKIRTL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD-ENLMLTETVGPD 535
K++ E++ +Q A+R YDL +AA+L+YG + ++ + + E SD E ++ E V D
Sbjct: 475 KEEMEQVKADIQAAQRNYDLNKAAELQYGKLPAIQKELAEAESTASDKERELVHEVVSED 534
Query: 536 QIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGRP 584
+I+++VS+WTGIPV +L ++E K+R++G EAV+ V+++++RS+AG+ P
Sbjct: 535 EISKIVSKWTGIPVAKLTESEKSKTLNLASELKKRVVGQDEAVDYVSDAIIRSKAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTELAK+LA LFD+E +VRIDMSEYME+HSVSRLIGAPPGYV
Sbjct: 595 SKPIGSFIFLGPTGVGKTELAKSLAAALFDNEQNMVRIDMSEYMEKHSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT+I
Sbjct: 655 GYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTII 714
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSN+ ++ G++T ++ D V+ +++ FRPE LNR+DEI+ F LS + +
Sbjct: 715 IMTSNI-GGADIAAAGGEITDELKND-VMAQLKSRFRPEFLNRIDEIITFRALSKDNISG 772
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ L M D+ RLA+R + + +T++A ++ + YD +YGARP++R+L+K V T ++RM+
Sbjct: 773 IVDLLMADLNSRLADREITIKLTESAKQHIIDQGYDQVYGARPLKRYLQKNVETLVARMI 832
Query: 825 VREEIDENSTVYID 838
+ + S + ID
Sbjct: 833 LAGSVSTQSAIVID 846
>gi|402848341|ref|ZP_10896604.1| ClpB protein [Rhodovulum sp. PH10]
gi|402501346|gb|EJW12995.1| ClpB protein [Rhodovulum sp. PH10]
Length = 869
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/864 (52%), Positives = 606/864 (70%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK+T ++ + A LA GH QF P HL LL DP G+ + I AGG A+
Sbjct: 1 MNFDKYTDRSRGFVQSAQSLALREGHQQFAPEHLLKVLLDDPEGMASGLIQRAGGR--AR 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
A+KK P ++ L +V A+ A + D+ + V++L+L L+
Sbjct: 59 DVHAGVEAALKKRPKVGGSGAGQLYIDPGLARVFDTAETAAEKAKDSFVTVERLLLALVI 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D++ G + AGV + + +E LR +GR +S+S + + ALK Y RDL + A
Sbjct: 119 EKDTEAGKILAAAGVTPQNLNAAIEALR--KGRTADSSSAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GK+DPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +LAD
Sbjct: 177 GKIDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPESLAD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L+ALDMGAL+AGAKYRGEFEERLKAVL+EV ++G ++LFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLALDMGALIAGAKYRGEFEERLKAVLQEVTSSDGGIVLFIDEMHTLVGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EY+K+VEKDAA RRFQ V+V EP+V D++SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYKKHVEKDAALARRFQPVFVPEPTVEDSISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA A +++Q+DS+PEE+D
Sbjct: 357 ERYEAHHGVRITDSALVAAATLSNRYITDRFLPDKAIDLVDEAAARLKMQVDSKPEELDL 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L+IE AL+KE D S+ARL + EL L + L R+K EKE++ ++
Sbjct: 417 IDREIIRLKIEQEALKKEHDAGSRARLDGLETELAALEKQSADLTARWKAEKEKLSSAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE-----GNQSDENLMLTE 530
LK + ++L L A+R+ + +A +L YG I E+E + + E G+Q M+ E
Sbjct: 477 LKTELDQLRVELANAQRKGEYQKAGELAYGRIPEIERRLAESEAAEHKGHQG--GAMVEE 534
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRA 579
V D +A+VVSRWTG+PV ++ + EKE R++G AEAV AV+ +V R+RA
Sbjct: 535 AVTADHVAQVVSRWTGVPVDKMLEGEKEKLLKMEEGLARRVVGQAEAVRAVSTAVRRARA 594
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P GSF+FLGPTGVGKTEL KALAE LFDDE +VRIDMSEYME+H+V+RLIGA
Sbjct: 595 GLQDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEQAMVRIDMSEYMEKHAVARLIGA 654
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGG LTEA+RRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF
Sbjct: 655 PPGYVGYEEGGALTEAIRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDF 714
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
RNT+IIMTSNLG++ L+ G+ + + + QV+ VR FRPE LNR+DEI++F L
Sbjct: 715 RNTLIIMTSNLGSQVLMEQAEGEDS-DLVKAQVMAVVRSAFRPEFLNRVDEIILFHRLER 773
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
EQ+ ++ +Q+ + L ER +AL++ A + + + +DP YGARP++R ++K V
Sbjct: 774 EQMGRIVEIQLGRLQKLLDERKIALSLDARAKEWLADKGFDPTYGARPLKRAIQKAVQDP 833
Query: 820 LSRMLVREEIDENSTVYIDASPKG 843
L+ +++ ++ + TV + + P G
Sbjct: 834 LAELILAGKVKDGDTVSVTSGPAG 857
>gi|423530858|ref|ZP_17507303.1| chaperone ClpB [Bacillus cereus HuB1-1]
gi|402445422|gb|EJV77292.1| chaperone ClpB [Bacillus cereus HuB1-1]
Length = 866
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/874 (52%), Positives = 627/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
QSAE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQSAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFARLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKAIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|428216552|ref|YP_007101017.1| ATP-dependent chaperone ClpB [Pseudanabaena sp. PCC 7367]
gi|427988334|gb|AFY68589.1| ATP-dependent chaperone ClpB [Pseudanabaena sp. PCC 7367]
Length = 875
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/857 (52%), Positives = 618/857 (72%), Gaps = 27/857 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG--GENAA 59
NP +FT K AI ++ +A + HL +LL D G+ A AG +
Sbjct: 5 NPQQFTEKAWAAIVRTPDIVKAAQQQRIESEHLFKSLL-DEEGLAASIFTKAGISVQMLR 63
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
AE N K S + + +L K+ RA+ +KA GD ++++ +IL E
Sbjct: 64 DRAEAFINSQAKISGSNSS----VYLGDSLDKLFDRAENERKAFGDDFISIEHMILPYGE 119
Query: 120 DSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
D + G LFKE G+ A+++ +E++RG + KV + + +++L+ YGRDL E A G
Sbjct: 120 DDRFGKRLFKEVGLTEAKLREIIEQIRGNQ--KVNDQNPENKYESLEKYGRDLTELAREG 177
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
+LDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+RGDVP +L D
Sbjct: 178 RLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIRGDVPESLRDR 237
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+LI LDMGAL+AGAKYRGEFEERLKAVLKEV + G ++LFIDEIH V+GAG T+G+MDA
Sbjct: 238 KLIGLDMGALIAGAKYRGEFEERLKAVLKEVTSSNGNIVLFIDEIHTVVGAGATQGTMDA 297
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P++ +T+SILRGLKE
Sbjct: 298 GNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPNIENTISILRGLKE 357
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGV+I D AL+ AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D +
Sbjct: 358 RYEVHHGVKIADNALIAAAALSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEI 417
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK +QLE+E +L+++ D + + + +EL +L+ + L +++ EKE ID+IR+L
Sbjct: 418 DRKILQLEMEKLSLKQDNDPDAVEQRDRLNRELANLKGEQSTLTAQWQAEKEVIDQIRQL 477
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETV 532
K++ + + +++AER YDL RAA+L+YG + +++E A +L Q+ +L E V
Sbjct: 478 KEESDRVNVEIEQAERNYDLNRAAELKYGKLTDLHRQLETAEAKLAEAQTSGLSLLREEV 537
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGL 581
+ IAE++S+WTGIPV++L + EKE R+IG +EAV AV++S+ RSRAGL
Sbjct: 538 TEEDIAEIISKWTGIPVSKLVETEKEKLLFLEDELHQRVIGQSEAVTAVSDSIQRSRAGL 597
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P SF+F+GPTGVGKTELAKALA LFD E+ +VRIDMSEYME+HSVSRL+GAPP
Sbjct: 598 ADPNRPIASFIFMGPTGVGKTELAKALAAYLFDAEDAMVRIDMSEYMEKHSVSRLVGAPP 657
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTE VRRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF+N
Sbjct: 658 GYVGYEEGGQLTEIVRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGRTVDFKN 717
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
TVIIMTSN+G++ +L + + RD+V+ +R +FRPE LNR+DEI++F L +
Sbjct: 718 TVIIMTSNIGSQFILDVVGDDSRYEEMRDRVINALRANFRPEFLNRVDEIIIFHALVKAE 777
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
LR++ +LQ+K + RL +R + L +++AALD + YDP+YGARP++R +++++ T+++
Sbjct: 778 LREIVKLQIKRLEKRLVDRKMGLKLSEAALDFIAEVGYDPVYGARPLKRIIQRQIETQIA 837
Query: 822 RMLVREEIDENSTVYID 838
+ L+R E E T+++D
Sbjct: 838 KSLLRGEFGEGDTIFVD 854
>gi|423099111|ref|ZP_17086819.1| ATP-dependent chaperone protein ClpB [Listeria innocua ATCC 33091]
gi|370794346|gb|EHN62121.1| ATP-dependent chaperone protein ClpB [Listeria innocua ATCC 33091]
Length = 866
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/864 (51%), Positives = 621/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + +H+ LL++ FA+ + + N +
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVIHVFKVLLTESD--FAKRVYDVAEVNV-E 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
++V ++A++K+P S + S L +++R A+ QK D ++ + LIL ++
Sbjct: 58 ELQKVVDEALRKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQKQLDDDFVSTEHLILAVM 117
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K + ++ + K+RG G+KV S + + ++AL YGRDLV +
Sbjct: 118 DQKSNPITAELKNQNKSKKQINEAILKIRG--GKKVTSQNAEENYEALTKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEMLQRELADYKEEANKMKSKWESEKSEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQ----SDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I VE + LE + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGKIPAVEKELLALETENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVQLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAYNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYVGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEITITISDNAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID K
Sbjct: 835 PLAREIVSGKIMPHSSVEIDLQDK 858
>gi|229068826|ref|ZP_04202122.1| Chaperone protein clpB 1 [Bacillus cereus F65185]
gi|229078466|ref|ZP_04211027.1| Chaperone protein clpB 1 [Bacillus cereus Rock4-2]
gi|228704888|gb|EEL57313.1| Chaperone protein clpB 1 [Bacillus cereus Rock4-2]
gi|228714334|gb|EEL66213.1| Chaperone protein clpB 1 [Bacillus cereus F65185]
Length = 866
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/874 (52%), Positives = 627/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEEIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E G+ EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGGHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|320160812|ref|YP_004174036.1| chaperone ClpB [Anaerolinea thermophila UNI-1]
gi|319994665|dbj|BAJ63436.1| chaperone ClpB [Anaerolinea thermophila UNI-1]
Length = 861
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/859 (52%), Positives = 596/859 (69%), Gaps = 26/859 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DKFT K EAI + +LA H P HL +AL+ G+ I G A
Sbjct: 1 MNLDKFTQKAQEAILKSQQLAQDYNHQAIEPAHLLLALIQQSEGVVPAIITRVAGSTLAL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E V Q + + P + I + ++V+ R++ K D +++ + ++L L D
Sbjct: 61 REELV--QELARRPKVYGSNASIGLAQPTVEVLNRSEQYAKGMQDEYISTEHILLALT-D 117
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
S + G+ + + +RG + +V S + + T+QAL+ YGRDL A GKL
Sbjct: 118 SPENKRLSQYGLTKDAILKALASIRGSQ--RVTSPTPEDTYQALEKYGRDLTAMARQGKL 175
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRR ++ILSRRTKNNP LIGEPGVGKTA+VEGLAQRIV GDVP L R+
Sbjct: 176 DPVIGRDEEIRRTIQILSRRTKNNPALIGEPGVGKTAIVEGLAQRIVNGDVPEGLKRKRI 235
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I LDMGALVAGAKYRGEFEERLKAVLKEV +A G+VILFIDE+H V+GAG EG+MDA N
Sbjct: 236 IQLDMGALVAGAKYRGEFEERLKAVLKEVTDAAGEVILFIDEMHTVVGAGAAEGAMDAGN 295
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
+ KPMLARG+L IGATTL+EYRK++EKD A ERRFQ + V EPSV DT+SILRGLK +Y
Sbjct: 296 MLKPMLARGELHMIGATTLDEYRKHIEKDPALERRFQPILVEEPSVEDTISILRGLKSRY 355
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D A++ AA LS RYI RHLPDKAIDL+DEA A +R ++DS+P+ ID ++R
Sbjct: 356 EVHHGVRITDAAVITAATLSHRYIPDRHLPDKAIDLIDEAAARLRTEIDSKPQAIDEVDR 415
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+ +QLEIE AL+KE+DKAS+ RL ++ +EL +L++K L R+K EKE I +R++K+
Sbjct: 416 QILQLEIERQALQKERDKASQERLSKLEQELANLKEKSASLHARWKLEKEAIANLRQVKE 475
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTETVGPD 535
+ ++ ++ AER +L AA LRYG + E++ + + E ++ E +L E V +
Sbjct: 476 QIDQTYRDIERAERENNLEEAARLRYGVLHELQNKVKEAEKRLAEIQQEGALLKEEVDAE 535
Query: 536 QIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IAE+VSRWTGIPV+RL + E +R++G EAV AV+ ++ R+RAGL P
Sbjct: 536 EIAEIVSRWTGIPVSRLLEGEMKKLLEMEERLHQRVVGQDEAVRAVSNAIRRARAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTELA+ALAE +FDDE+ ++RIDMSEY E+H+VSRLIGAPPGYV
Sbjct: 596 NRPIGSFIFLGPTGVGKTELARALAEFMFDDEHAMIRIDMSEYQEKHTVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRRRPYSVVLFDE+EKAH VFN LLQ+LDDGRLTDGQGRTVDFRN V+
Sbjct: 656 GYEEGGQLTEAVRRRPYSVVLFDEIEKAHPEVFNVLLQLLDDGRLTDGQGRTVDFRNVVV 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E LS + QV+R+Q+ + ++ HFRPE LNR+DE+VVF PL E L+K
Sbjct: 716 IMTSNLGSELWLSNV-----GQVSREQITRVLQAHFRPEFLNRIDEVVVFHPLGQEHLQK 770
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q++ + L ERG L VT A + YDP +GARP++R +++++ L+ L
Sbjct: 771 IVEIQLRRMQNLLEERGYHLEVTKEAKAYLAEVGYDPDFGARPLKRAIQRELQDPLALHL 830
Query: 825 VREEIDENSTVYIDASPKG 843
+ E T+ ++ P G
Sbjct: 831 LNGEFKPGDTIRVERVPDG 849
>gi|253580252|ref|ZP_04857518.1| clp protease ATP binding subunit [Ruminococcus sp. 5_1_39B_FAA]
gi|251848345|gb|EES76309.1| clp protease ATP binding subunit [Ruminococcus sp. 5_1_39BFAA]
Length = 863
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/876 (52%), Positives = 610/876 (69%), Gaps = 39/876 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ +A+ ++A G+ + HL ALL + + I E
Sbjct: 1 MNISKFTQKSVQAVQDLEKVAYQFGNQEIEEEHLLYALLEQEDSLILKLIEKM--EIDKD 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
NQA+ + E+ L K + A+ KA GD +++V+ L L LL
Sbjct: 59 YFRNSLNQALD--AKVKVSGGELRFGQYLNKALVSAEDEAKAMGDEYVSVEHLFLALLRY 116
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ LF+E G+ R + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 117 PSPSMKKLFQEFGITKERFLQALSTVRGNQ--RVVSDNPEATYDTLNKYGEDLVEKARNQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIR ++RILSR+TKNNPVLIGEPGVGKTA +EGLAQRIV DVP L D
Sbjct: 175 KLDPVIGRDEEIRNIIRILSRKTKNNPVLIGEPGVGKTAAIEGLAQRIVAEDVPEGLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
++ ALDMGALVAGAKYRGEFEERLKAVL+EV+++EG +ILFIDE+HL++GAG+T+G+MDA
Sbjct: 235 KIFALDMGALVAGAKYRGEFEERLKAVLEEVKKSEGNIILFIDELHLIVGAGKTDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRGLKE
Sbjct: 295 SNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVDEPTVEDTISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 355 RYEVFHGVKITDSALVAAATLSHRYITDRFLPDKAIDLVDEACALIKTELDSMPSELDEQ 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK MQLEIE AL+KE D SK RL ++KEL +LRD ++ EK ++++++L
Sbjct: 415 RRKIMQLEIEESALKKETDNLSKERLETLQKELAELRDTFNTQKAQWDNEKHSVEKLQKL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAA--IGQLEGNQSDENLMLTETVGP 534
+++ E++ +Q+A++ YDL +AA L+YG + +++ I + +SD +L + E V
Sbjct: 475 REQIEDVNKQIQKAKQNYDLEKAAQLQYGELPKLQQQLEIEEKSVKESDRSL-VHEAVTD 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D+IA ++SRWTGIPVTRL + E+ +R++G E V V +++LRS+AG+
Sbjct: 534 DEIARIISRWTGIPVTRLTEGERAKLLTLEDQLHKRVVGQDEGVKRVTDAILRSKAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAK LAE LFDDE +VRIDMSEYME++SVSRLIGAPPGY
Sbjct: 594 PTKPIGSFLFLGPTGVGKTELAKTLAENLFDDEQNMVRIDMSEYMEKYSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 654 VGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSN+G+ +LL G+ G++ + A+ QV+ ++R HFRPE LNRLDEI++F PL+
Sbjct: 714 LIMTSNIGSPYLLDGIDENGEIKPE-AQSQVMDDLRGHFRPEFLNRLDEIIMFKPLTKSN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ L + ++ RLA++ ++L +TDAA D V+ YDP+YGARP++R+L+K V T +
Sbjct: 773 IGKIVDLMVGELDKRLADQELSLELTDAAKDQVIENGYDPVYGARPLKRYLQKYVETLAA 832
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFV 857
R ++ ++ GD LV VQ NG F+
Sbjct: 833 RKILSGDVH-----------AGDTLVLDVQ-NGEFI 856
>gi|255022127|ref|ZP_05294130.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
gi|340782895|ref|YP_004749502.1| ClpB protein [Acidithiobacillus caldus SM-1]
gi|254968391|gb|EET25950.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
gi|340557046|gb|AEK58800.1| ClpB protein [Acidithiobacillus caldus SM-1]
Length = 865
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/869 (52%), Positives = 616/869 (70%), Gaps = 31/869 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE-NAA 59
M DK T K +A+ A LA + H Q P+HL +A L GI + AG +A
Sbjct: 1 MRVDKLTTKFQQALQEAQSLALARDHQQMEPVHLLLAFLDQDGGIARPLLAKAGVRVDAL 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
++A +A++ LP P E+ L ++ A + GD++++ + +L LLE
Sbjct: 61 RNA---LGRALESLPKVEGVPGEVQMGRDLGNLLNLADKIAQKRGDSYISTEHFLLALLE 117
Query: 120 D-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
D + G LFKEAG + ++ V++L G G K+ + + QAL+ Y D E+A G
Sbjct: 118 DRGEAGRLFKEAGASSKDLEQAVQELHG--GEKINDPNAEEQRQALEKYTLDYTERAAQG 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++L RR+KNNPVLIGEPGVGKTA+VEGLAQRIV G+VP +L
Sbjct: 176 KLDPVIGRDDEIRRTIQVLLRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRGK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL+ LD+GAL+AGAK+RGEFEERLKA+L ++ +AEGK+ILFIDEIH ++GAG+ +G+MDA
Sbjct: 236 RLLGLDLGALIAGAKFRGEFEERLKALLNDLAKAEGKIILFIDEIHTLVGAGKADGAMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KP LARG+L CIGATTL+EYRKY+EKDAA ERRFQ+V V EPSV DT++ILRGLKE
Sbjct: 296 GNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQRVLVDEPSVEDTIAILRGLKE 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AAQLS RYI+ R+LPDKAIDLVDEA + +++++DS+PEE+D L
Sbjct: 356 RYEAHHGVRITDPALVAAAQLSHRYISDRNLPDKAIDLVDEAASRIKMEIDSKPEELDEL 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER+ +QL IE AL KEKD+AS+ RL + ++ +L+ K Q L +K EK I+ ++
Sbjct: 416 ERRLIQLNIEKVALAKEKDEASRKRLENLESQIAELQRKYQELEEIWKSEKLAIEGTSQI 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD-----ENLMLTET 531
+++ + L L A R DL R A ++YG I +EA + + E ++D L+ TE
Sbjct: 476 QKELDRLRVELDNARRANDLERMAQIQYGQIPALEAKLREAEKQEADGQRKAPTLLRTE- 534
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IAEV+SRWTGIPV+++ + EKE+L +G EAV AVA ++ RSRAG
Sbjct: 535 VTEEEIAEVISRWTGIPVSKMLEGEKEKLLKMEERLRARVVGQDEAVTAVANAIRRSRAG 594
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSFLFLGPTGVGKTEL KALAE LFD E+ +VRIDMSE+ME+HSV+RLIGAP
Sbjct: 595 LADPRRPIGSFLFLGPTGVGKTELTKALAEFLFDSEDHMVRIDMSEFMEKHSVARLIGAP 654
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGG LTEAVRR+PYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFR
Sbjct: 655 PGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFR 714
Query: 701 NTVIIMTSNLGAEHLLS-GMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
NTVI+MTSNLG++ + G +G V + R V++ V+ HFRPE LNR+DE+V+F PLS
Sbjct: 715 NTVIVMTSNLGSDRIQEYGRLGDV--EGMRGAVMEVVQGHFRPEFLNRIDELVIFQPLSR 772
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
+QLR +A +QM + RL ER + + ++DAA++++ +DP+YGARP++R +++++
Sbjct: 773 QQLRAIAEIQMGSLRARLRERDLDIVLSDAAVNLLAETGFDPVYGARPLKRVIQREIENP 832
Query: 820 LSRMLVREEIDENSTVYIDASPKGDNLVY 848
L++ L+R E +++DA +G V+
Sbjct: 833 LAQRLLRGEFAPGQVIHVDA--QGGQFVF 859
>gi|158425824|ref|YP_001527116.1| ATPase AAA [Azorhizobium caulinodans ORS 571]
gi|158332713|dbj|BAF90198.1| AAA ATPase [Azorhizobium caulinodans ORS 571]
Length = 879
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/865 (53%), Positives = 605/865 (69%), Gaps = 34/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN + +T + + A A GH QF P HL LL DP G+ A ++ AGG Q
Sbjct: 1 MNFEIYTERARGFVQSAQSYAVREGHQQFVPEHLLKVLLDDPEGLCAGLVSRAGGN--LQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A++KLP ++ S L +V A+ A K GD ++ V++L+L L
Sbjct: 59 LVRDETEAAVRKLPKVQGGSGQVYLSQGLARVFDAAEQAAKKAGDGYVTVERLLLALTIE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
++++ G + GV + + +E LR +GR ++A+ + + ALK Y RDL + A G
Sbjct: 119 KETEAGKILARGGVTPQALNTAIEALR--KGRTADTATAENAYDALKKYARDLTQAARDG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++L+RRTKNNPVLIGEPGVGKTA+VEGLA+RIV GDVP +L +
Sbjct: 177 KLDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLARRIVDGDVPESLKNK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
L+ALDMGAL+AGAKYRGEFEERLK +L+EV AEG +ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 SLLALDMGALIAGAKYRGEFEERLKGILQEVTAAEGGIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D+L
Sbjct: 357 KYELHHGVRITDSALVAAATLSNRYITDRFLPDKAIDLVDEAGSRLRMQVDSKPEELDSL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R ++L+IE AL+KE D AS+ RL + KEL DL +K L ++K EK+++ E +
Sbjct: 417 DRDIVRLKIEQEALKKETDVASQDRLKRLEKELADLEEKSDVLTSKWKAEKDKLGEATDV 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVGPD 535
K K ++ L A+R+ + +A +L Y I +E + +LE + QS E M+ E+V PD
Sbjct: 477 KAKLDQARADLAIAQRQGEYQKAGELTYAVIPGLEKRLAELEASGQSGE--MVKESVTPD 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA VVSRWTG+PV ++ + E+++L IG +EAV AV+ +V R+RAGL P
Sbjct: 535 HIAGVVSRWTGVPVDKMLEGERDKLLRMEQELAKRVIGQSEAVAAVSTAVRRARAGLQDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLF+GPTGVGKTEL KALA LFDDE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 595 NRPIGSFLFIGPTGVGKTELTKALASFLFDDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 655 GYEEGGALTEAVRRRPYQVVLFDEVEKAHQDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 714
Query: 705 IMTSNLGAEHLLS-------GMMGKVTMQVARDQ-----VLQEVRKHFRPELLNRLDEIV 752
IMTSNLGAE+L G+ G +V D+ V+Q VR+HFRPE +NR+DEIV
Sbjct: 715 IMTSNLGAEYLADPRQPVGFGIPGHDGEKVVSDEEAYELVMQAVRRHFRPEFINRIDEIV 774
Query: 753 VFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWL 812
+F L +Q+ + +Q+K +A L +R + L +T A + + YDP YGARP++R +
Sbjct: 775 MFHRLRKDQMGGIVEIQLKRLAKLLEDRKITLDLTPEARAFLADKGYDPAYGARPLKRTI 834
Query: 813 EKKVVTELSRMLVREEIDENSTVYI 837
+K V L++ ++ E+ + S V+I
Sbjct: 835 QKLVQDPLAQQILSGEVLDGSRVHI 859
>gi|239826273|ref|YP_002948897.1| ATP-dependent chaperone ClpB [Geobacillus sp. WCH70]
gi|239806566|gb|ACS23631.1| ATP-dependent chaperone ClpB [Geobacillus sp. WCH70]
Length = 864
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/858 (53%), Positives = 613/858 (71%), Gaps = 25/858 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K EA A +A H Q HL +ALL G+ + A
Sbjct: 1 MNTNKFTEKVQEAFLEAQSIAIRRHHQQLDVEHLLLALLQQEEGLARRIFTLLRVNIDAF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDE-IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ E +KK P A E + S L +++ +A+ K D +++V+ L+L
Sbjct: 61 THE--LQMLLKKKPEVLGAGAENLYMSQRLQRLLTKAEEEAKNMQDEYISVEHLLLAFTS 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AG 176
ED IG LF + + + + ++RG + +V S + + T++ALK YGRDLV + AG
Sbjct: 119 EDDDIGRLFHRYNINRSSLLHVLTEIRGNQ--RVTSPNPEATYEALKKYGRDLVAEVKAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L D
Sbjct: 177 KIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ ALDM +LVAGAK+RGEFEERLKAVL E++++EG++ILFIDE+H ++GAGR EG++DA
Sbjct: 237 TIFALDMSSLVAGAKFRGEFEERLKAVLNEIKKSEGRIILFIDELHTIVGAGRAEGAIDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQQV V EPSV DT+SILRGLKE
Sbjct: 297 GNMLKPMLARGELHCIGATTLDEYRQYIEKDPALERRFQQVLVEEPSVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
++E HHGV+I DRALV AA L+ RYI+ R LPDKAIDLVDEACA +R ++DS P E+D +
Sbjct: 357 RFEVHHGVKIHDRALVAAATLADRYISDRFLPDKAIDLVDEACATIRTEMDSMPSELDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
R+ MQLEIE AL KE D+ASK R + KEL DLR+K + ++++EKE I +R +
Sbjct: 417 MRRVMQLEIEEAALRKETDEASKERFEALTKELSDLREKANSMKAQWQQEKEAIQRVRDV 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTETVG 533
++ E+ L+EAE YDL +AA+LR+G I ++E + QLE S E +L E V
Sbjct: 477 REALEKAKRELEEAENEYDLNKAAELRHGRIPQLEKQLKQLEQQMNENSQEGRLLREEVT 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKER-----------LIGLAEAVNAVAESVLRSRAGLG 582
++IAE+VSRWTGIP+T+L + E+E+ +IG EAV VA++VLR+RAG+
Sbjct: 537 EEEIAEIVSRWTGIPLTKLVEGEREKLLRLHELLHERVIGQDEAVELVADAVLRARAGIK 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIGAPPG
Sbjct: 597 DPNRPIGSFIFLGPTGVGKTELAKTLAQALFDSEEQMIRIDMSEYMEKHAVSRLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVDF+NT
Sbjct: 657 YVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNT 716
Query: 703 VIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
V+IMTSN+G+ LL G+ G++ + R+QVLQ++R HFRPE LNR+D+IV+F PL+
Sbjct: 717 VVIMTSNIGSHLLLEGVTENGEIKEE-TREQVLQQLRAHFRPEFLNRIDDIVLFKPLTMN 775
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+++ + ++A RL++R ++L++TD A + + +DP+YGARP++R+++K++ T L
Sbjct: 776 EIKGIVTKFANELAKRLSDRHISLSLTDKAKEYIAESGFDPVYGARPLKRFMQKQIETPL 835
Query: 821 SRMLVREEIDENSTVYID 838
++ +V + + STV +D
Sbjct: 836 AKEIVAGRVKDYSTVVVD 853
>gi|390604365|gb|EIN13756.1| hypothetical protein PUNSTDRAFT_58027 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 905
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/866 (53%), Positives = 602/866 (69%), Gaps = 40/866 (4%)
Query: 6 FTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSG---------------IFAQAI 50
FT K E+IA A +LA +AQ P HLA LL++ +G +F+ I
Sbjct: 7 FTDKAQESIAAAVQLAKDYANAQVHPAHLAFVLLNESAGDPTPPGGVTHTQGTSLFSSVI 66
Query: 51 NNAGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAV 110
AGG+ A +R + + +LP+QTP PDE S+ +KV+R AQ+ QK D+++A
Sbjct: 67 QKAGGDPAV--VKRGIQKIIVRLPAQTPPPDETTLSSAALKVLREAQSLQKTMHDSYIAQ 124
Query: 111 DQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRD 170
D L+L L++D+ I + KEA + A +K+ + ++RG R+VES + + F AL Y D
Sbjct: 125 DHLLLALIKDASIAAVLKEASLTEAAIKTAITQIRGN--RRVESKTAEQGFDALSKYAVD 182
Query: 171 LVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD 228
L A GKLDPVIGRD EIRRV RIL RRTKNNPVLIGEPGVGKT+VVEGLAQRIV D
Sbjct: 183 LTALAEEGKLDPVIGRDNEIRRVTRILCRRTKNNPVLIGEPGVGKTSVVEGLAQRIVNRD 242
Query: 229 VPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEA--EGK-VILFIDEIHLVL 285
VP++L RL +LDMGAL+AGAKY+GE+EER+K+VL EVE+A EG VILFIDE+HL++
Sbjct: 243 VPASLI-ARLFSLDMGALMAGAKYKGEYEERIKSVLNEVEKASEEGTGVILFIDELHLIM 301
Query: 286 -GAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV 344
G G G MDAANLFKP+LARG+LRCIGATTL EYRKY+E DAA ERRF QV V EPSV
Sbjct: 302 AGRGAEGGGMDAANLFKPLLARGKLRCIGATTLAEYRKYIETDAALERRFAQVLVNEPSV 361
Query: 345 PDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRV 404
PDT+SILRG++EKYE HHGVRI D AL+ AAQL+ RY+T R LPD AIDLVDEACA+VRV
Sbjct: 362 PDTISILRGIREKYEVHHGVRIMDAALIQAAQLAHRYLTSRRLPDAAIDLVDEACASVRV 421
Query: 405 QLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYK 464
++ PEEID L+R++++LE+E+HALE+EKD ASK RL+ RK + D+ DKL+PL Y+
Sbjct: 422 TRETAPEEIDRLQRRKLELEVEIHALEREKDDASKERLIHARKAIADVDDKLRPLQAEYE 481
Query: 465 KEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE 524
EK R DEI +++K +EL EAERRYDLA A+DLRY AI ++ + +LE +++E
Sbjct: 482 NEKHRGDEIANVRRKIDELKAKADEAERRYDLATASDLRYYAIPDLNKRLAELEAQKAEE 541
Query: 525 NLMLT--ETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVA 571
+ T + V P+QIAE+V RWT IPVTRL EKE+L +G EAV AVA
Sbjct: 542 DAAGTGKDVVTPEQIAEIVGRWTNIPVTRLMSTEKEKLLRLEKTLAENVVGQPEAVKAVA 601
Query: 572 ESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQH 631
++ SR+GL +P SFLF GP+G GKT L K LA LFD + ++RID SEY E+H
Sbjct: 602 NAIRLSRSGLRNEGRPIASFLFAGPSGTGKTLLTKTLATVLFDSPDAMIRIDASEYSEKH 661
Query: 632 SVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTD 691
S+SRLIGAPPGY+GH+ GGQLTE VRR+PYS+VL DE+EKA LQVLDDGRLTD
Sbjct: 662 SISRLIGAPPGYIGHDAGGQLTEYVRRKPYSIVLIDEIEKASREFVTLFLQVLDDGRLTD 721
Query: 692 GQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEI 751
GQGR VDFRNTVI+MTSNLGA +L G V RD V+ ++ HF PE +NR+DEI
Sbjct: 722 GQGRVVDFRNTVIVMTSNLGAAYLNDMGEGPVKPGT-RDLVMGAIQSHFPPEFINRIDEI 780
Query: 752 VVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRW 811
V++ LS + K+ +++K+V RLA R + L + D A + +++ Y P YGARP+ R
Sbjct: 781 VIYRTLSRRNVMKIIDIRLKEVQERLATRKITLVLDDEAKNYLVSMGYSPTYGARPLNRA 840
Query: 812 LEKKVVTELSRMLVREEIDENSTVYI 837
++++++ LS +++ + I + V +
Sbjct: 841 IQQELLNPLSVLILSDRIRDGEVVNV 866
>gi|254431585|ref|ZP_05045288.1| ATP-dependent chaperone ClpB [Cyanobium sp. PCC 7001]
gi|197626038|gb|EDY38597.1| ATP-dependent chaperone ClpB [Cyanobium sp. PCC 7001]
Length = 883
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/859 (52%), Positives = 605/859 (70%), Gaps = 26/859 (3%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENA 58
M+P + FT K A+ A +LA Q HL ALL+ G+ + + AG +
Sbjct: 1 MHPTAELFTEKAWGAVVAAQQLAVQKRQQQMESEHLFAALLAQ-QGLAGRILEKAGVDVG 59
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
S + + M PS + PD + L V+ +A ++++GD+++AV+ L+L L
Sbjct: 60 GLSQK--VDAFMAGQPSLSAPPDNVYLGKGLNSVLDQADQLKQSYGDSYIAVEHLLLALA 117
Query: 119 EDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D + G L +AG ++K V+ +RG + V + + T+++L+ YGRDL A
Sbjct: 118 IDDRCGKQLLSQAGTNADKLKEAVQAVRGSQ--TVTDQNPEGTYESLEKYGRDLTAAARD 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 176 GKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPQALQN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LIALDMGAL+AGAKYRGEFEERLKAVLKEV +EG+++LFIDEIH V+GAG T G+MD
Sbjct: 236 RQLIALDMGALIAGAKYRGEFEERLKAVLKEVTSSEGQIVLFIDEIHTVVGAGATGGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KPMLARG+LRCIGATTL+E+R+++EKD A ERRFQQV+V +P+V DT+SILRGLK
Sbjct: 296 ASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVFVDQPTVEDTISILRGLK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV AA LS+RYI R LPDKAIDLVDE+ A +++++ S+PEEID
Sbjct: 356 ERYEVHHGVRIADNALVAAAVLSSRYIADRFLPDKAIDLVDESAARLKMEITSKPEEIDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QLE+E +L +E D ASK RL + +EL +LR++ L +++ EK ID +
Sbjct: 416 LDRRILQLEMEKLSLGRESDSASKDRLERLERELAELREQQSTLNAQWQAEKGSIDALSA 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQ-----LEGNQSDENLMLTE 530
LK++ E++ +++A+R+YDL +AA+L YG + E+ + EGN S E +L E
Sbjct: 476 LKEEIEQVQLQVEQAKRQYDLNKAAELEYGTLAELHKRLAAKEAELSEGNGSGEKSLLRE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRA 579
V D IAEV+++WTGIPV+RL Q+E R+IG +AV AVA+++ RSRA
Sbjct: 536 EVTEDDIAEVIAKWTGIPVSRLVQSEMEKLLHLEEELHTRVIGQEQAVTAVADAIQRSRA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P SFLFLGPTGVGKTEL+KALA QLFD + +VRIDMSEYME+H+VSRLIGA
Sbjct: 596 GLSDPNRPIASFLFLGPTGVGKTELSKALAAQLFDSDEAMVRIDMSEYMEKHAVSRLIGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTVDF
Sbjct: 656 PPGYVGYEEGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
NTV+I+TSN+G+ +L +V +R HFRPE LNRLDE ++F L
Sbjct: 716 TNTVLILTSNIGSSSILDLAGDPARHGEMEKRVNDALRAHFRPEFLNRLDETIIFHSLKQ 775
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E+LR++ LQ+K + RL +R + LA+ ALD + YDP+YGARP++R +++++ T
Sbjct: 776 EELREIVELQVKRLERRLDDRKLGLALNADALDWLAGVGYDPVYGARPLKRAIQRELETP 835
Query: 820 LSRMLVREEIDENSTVYID 838
+++ ++ E T+ +D
Sbjct: 836 IAKAILAGEFTPGHTITVD 854
>gi|444311557|ref|ZP_21147164.1| ATPase [Ochrobactrum intermedium M86]
gi|443485116|gb|ELT47911.1| ATPase [Ochrobactrum intermedium M86]
Length = 873
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/864 (52%), Positives = 605/864 (70%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ + D G+ + I AGG A
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHVLKVFVDDDEGLASSLIERAGGRIA-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRIGLQTALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ ++ ++ AGV + + +R +GR +SAS ++ F ALK Y RDL E A G
Sbjct: 119 KSAKTSEILSAAGVTPTALNKVINDMR--KGRTADSASAESNFDALKKYARDLTEDARSG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+++G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKSDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK R + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRFQRLEKELTDLEEESAELTSKWQSEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRSGEFQKAGELAYGTIPQLEKQLVEAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+++SRWTGIPV R+ + E+E+L +G EAV A++++V R+RAGL P
Sbjct: 536 VAQIISRWTGIPVDRMLEGEREKLLRMEDELAKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALAAFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + K ++ R++V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGEKDDVESVREEVMGVVRAAFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + + L +R + L + + A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQMLLNDRKIVLQLEEDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 835 LGDILDGSIVKITAG--SDRLNFR 856
>gi|295102092|emb|CBK99637.1| ATP-dependent chaperone ClpB [Faecalibacterium prausnitzii L2-6]
Length = 870
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/876 (51%), Positives = 618/876 (70%), Gaps = 33/876 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQ---AINNAGGEN 57
MN +++T KT EA+ A +LA H P HL AL + G+ Q +N G
Sbjct: 1 MNTNQYTQKTLEALQAAQQLAVEYQHNALEPEHLLHALATQEQGLIPQLLQKLNVDAGSF 60
Query: 58 AAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+A AE++ AM ++ PD++ S KV+ A KA D +++V+ L L L
Sbjct: 61 SAAVAEKL--SAMPRVSGSGRDPDKVYISQATDKVLSAAAREAKAMKDDYVSVEHLFLAL 118
Query: 118 LEDS--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L++ +LF+ G+ + ++ +RG + +V + + + T+ AL+ YG+DLV+ A
Sbjct: 119 LDEQTQNTSELFRAFGITKDKFLQQLTAVRGNQ--RVTNDNPEDTYNALQKYGQDLVDLA 176
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD+EIR V+RILSR+TKNNP LIGEPGVGKTA+ EGLAQRIVRGDVP NL
Sbjct: 177 RKQKLDPVIGRDQEIRNVIRILSRKTKNNPCLIGEPGVGKTAIAEGLAQRIVRGDVPENL 236
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + +LDMGALVAGAKYRGEFEERLK+VL EV+++EG++ILFIDE+H ++GAG+T+G+
Sbjct: 237 KDRTVFSLDMGALVAGAKYRGEFEERLKSVLNEVKKSEGRIILFIDELHTIVGAGKTDGA 296
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQ V V EP+V DT+SILRG
Sbjct: 297 MDAGNLLKPMLARGELHCIGATTLDEYRQYIEKDPALERRFQPVQVDEPTVEDTISILRG 356
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HGV+I D AL+ AA LS RYIT R LPDKAIDLVDEACA ++ ++DS P E+
Sbjct: 357 LKERYEVFHGVKISDNALIAAATLSDRYITDRFLPDKAIDLVDEACAMIKTEMDSMPSEM 416
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D+L + QL+IE +L+KE D S++RL ++ KEL +L+DK + +++ EK I ++
Sbjct: 417 DDLAHRITQLQIEQVSLKKETDALSQSRLRDLEKELAELQDKFHSMKAKWENEKNAIGKV 476
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLMLTET 531
+ L+++ E+ A+++A+R YDL +AA+L+YG + +++ + + E E+ +L +
Sbjct: 477 QSLREQIEQTNAAIEKAQREYDLNKAAELKYGKLPQLQKQLEEEEKIAAAKKEDSLLRDR 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IA +V+RWTGIPV +L + E+E+L IG EAV V+E++LRSRAG
Sbjct: 537 VTDEEIARIVARWTGIPVEKLVEGEREKLLHLDDVLHKRVIGQDEAVTKVSEAILRSRAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P +P GSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDM+EYME+ SVSRLIGAP
Sbjct: 597 IANPNRPIGSFLFLGPTGVGKTELAKALAQALFDDERNMVRIDMTEYMEKFSVSRLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+
Sbjct: 657 PGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVT------MQVARDQVLQEVRKHFRPELLNRLDEIVVF 754
NTVII+TSNLG++ +L+ + + + AR Q+ ++ FRPE LNRLDEIV +
Sbjct: 717 NTVIILTSNLGSDIILNDLEQRRVEGSNELSEDARKQIDLLLKSKFRPEFLNRLDEIVYY 776
Query: 755 DPLSHEQLRKVARLQMKDVAIRLAE-RGVALAVTDAALDIVLAESYDPIYGARPIRRWLE 813
L+ ++ RK+ LQ++D+ R+ E + + L VT AA D ++ SYD +YGARPI+R+++
Sbjct: 777 KSLTKDETRKIVDLQLEDLRKRMDEGKHLKLDVTTAAKDFIIDSSYDSVYGARPIKRFIQ 836
Query: 814 KKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
+V T +++ +++ E +T+ +D G LV R
Sbjct: 837 SRVETLIAKAIIQGSYPEGATLTVDYD--GTGLVLR 870
>gi|291548302|emb|CBL21410.1| ATP-dependent chaperone ClpB [Ruminococcus sp. SR1/5]
Length = 860
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/859 (52%), Positives = 611/859 (71%), Gaps = 31/859 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ +A+ ++A G+ + HL ALL+ + + I E
Sbjct: 1 MNISKFTQKSVQAVQDLEKIAYEYGNQEIEEEHLLYALLTQEDSLILKLI-----EKMEI 55
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
E + + L ++ E+ L K + A+ KA GD +++V+ L L +L+
Sbjct: 56 QKEYFIDTVKRALDARVKVSGGELRFGQYLNKALVSAEDEAKAMGDEYVSVEHLFLSMLK 115
Query: 120 DSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG- 176
+ + LF E G+ R + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 116 NPSPSMKKLFNEFGITRERFLQALSTVRGNQ--RVVSDNPEATYDTLNKYGEDLVEKAKN 173
Query: 177 -KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR ++RILSR+TKNNPVLIGEPGVGKTA +EGLAQRIV GDVP L +
Sbjct: 174 QKLDPVIGRDMEIRNIIRILSRKTKNNPVLIGEPGVGKTAAIEGLAQRIVAGDVPEGLKN 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
++ ALDMGALVAGAKYRGEFEERLKAVL+EV+++EG++ILFIDE+HL++GAG+T+G+MD
Sbjct: 234 KKIFALDMGALVAGAKYRGEFEERLKAVLEEVKKSEGQIILFIDELHLIVGAGKTDGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA RRFQ V V EP+V DT+SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALARRFQPVMVNEPTVEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 ERYEVFHGVKITDSALVAAATLSHRYITDRFLPDKAIDLVDEACALIKTELDSMPTELDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
RK MQLEIE AL+KE D SK RL +++KEL +LRD ++ EK ++++++
Sbjct: 414 QRRKIMQLEIEESALKKETDNLSKERLADLQKELAELRDTFNTQKAQWDNEKHSVEKLQK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTET 531
L+++ E++ +Q+A++ YDL +AA+L+YG + Q++E Q++ +SD +L + E
Sbjct: 474 LREQIEDINKQIQKAKQNYDLEKAAELQYGELPKLQQQLEVEEKQVK--ESDRSL-VHEA 530
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAG 580
V D+IA ++SRWTGIPVT+L + E+ +L+GL E V V +++LRS+AG
Sbjct: 531 VTDDEIARIISRWTGIPVTKLTEGERTKLLGLEDELHKRVVGQDEGVRLVTDAILRSKAG 590
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P +P GSFLFLGPTGVGKTELAK LA LFDDE +VRIDMSEYME++SVSRLIGAP
Sbjct: 591 IKDPTKPIGSFLFLGPTGVGKTELAKTLAATLFDDEQNMVRIDMSEYMEKYSVSRLIGAP 650
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+
Sbjct: 651 PGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFK 710
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
NT++IMTSN+G+ +LL G+ K ++ A++QV+ ++R HFRPE LNRLDEI++F PL+
Sbjct: 711 NTILIMTSNIGSPYLLDGIDEKGDIKPEAQEQVMNDLRGHFRPEFLNRLDEIIMFKPLTK 770
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
+ + K+ L +K+++ RLA++ ++L +TDAA +V+ YDP+YGARP++R+L+ V T
Sbjct: 771 DNVGKIVDLMVKELSDRLADQELSLELTDAAKQMVVDNGYDPVYGARPLKRYLQNYVETL 830
Query: 820 LSRMLVREEIDENSTVYID 838
++ ++ ++ T+ +D
Sbjct: 831 TAKKILSGDVHAGDTIVLD 849
>gi|328542101|ref|YP_004302210.1| ATPase AAA [Polymorphum gilvum SL003B-26A1]
gi|326411850|gb|ADZ68913.1| ATPase, AAA family [Polymorphum gilvum SL003B-26A1]
Length = 865
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/869 (53%), Positives = 610/869 (70%), Gaps = 29/869 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE--NA 58
MN DK+T + I A A GH QF P H+ LL DP G+ A I AGG A
Sbjct: 1 MNFDKYTERARGFIQSAQTHALGRGHQQFAPEHVLKVLLDDPEGLAAGLIERAGGRAREA 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
ERV + K+P T ++ + + + + + + GD+ + V++++L L
Sbjct: 61 LAEVERVLD----KMPKVTGGSGQLYMAPAMARFFDQVEKLAEKAGDSFVTVERMLLALA 116
Query: 119 --EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
DS G L AGV + V LR +GR +SAS ++ + ALK Y RDL + A
Sbjct: 117 MDGDSDAGKLLARAGVTPTALNQAVNSLR--KGRTADSASAESQYDALKKYARDLTQAAR 174
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L
Sbjct: 175 DGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLK 234
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +L+ALDMGAL+AGAKYRGEFEERLKA+L EV+ A G V+LFIDE+H ++GAG+ EG+M
Sbjct: 235 DKQLLALDMGALIAGAKYRGEFEERLKAILSEVQSAAGGVVLFIDEMHTLVGAGKAEGAM 294
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V EP+V DT+SILRG+
Sbjct: 295 DASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVDEPTVEDTISILRGI 354
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KEKYE HHGVRI D A+V AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D
Sbjct: 355 KEKYELHHGVRITDSAIVSAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELD 414
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L+R+ +Q++IE AL+KE D A++ RL ++ KEL +L ++ L R++ EKE++ +
Sbjct: 415 ELDRRIIQIKIEREALKKESDPAAQDRLGKLEKELTELEEESDALTRRWQGEKEKLSSEQ 474
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS-DENLMLTETVG 533
+LK++ ++ L++A+R+ DLARA +L YG I E+E + EG S D+ ML E V
Sbjct: 475 KLKEQLDQARIDLEKAQRQGDLARAGELAYGVIPELERKLA--EGVASGDKGAMLDEAVT 532
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
P+ IA+VVS+WTGIPV ++ + E+E R++G AEA++AV+ +V R+RAGL
Sbjct: 533 PNHIAQVVSKWTGIPVDKMLEGEREKLLRMEDDLARRVVGQAEAIHAVSTAVRRARAGLQ 592
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTEL KALA LFDD+ +VRIDMSE+ME+HSV+RLIGAPPG
Sbjct: 593 DPNRPIGSFMFLGPTGVGKTELTKALAAFLFDDDTAMVRIDMSEFMEKHSVARLIGAPPG 652
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 653 YVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNT 712
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IIMTSNLGAE+L S G+ + V R +V+ VR HFRPE LNRLDEIV+F L Q+
Sbjct: 713 LIIMTSNLGAEYLASQPEGQDSDAV-RGEVMAVVRGHFRPEFLNRLDEIVLFHRLQRSQM 771
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q++ + LA+R + L + D A+ + + YDP YGARP++R ++K+V L+
Sbjct: 772 ASIVAIQLERLRALLADRKIELQLDDGAIGWLSQKGYDPAYGARPLKRVIQKEVQDPLAE 831
Query: 823 MLVREEIDENSTVYIDASPKGDNLVYRVQ 851
++ EI + V + A D LV+ +
Sbjct: 832 KILGGEIVDGQRVTVSAGV--DRLVFTTE 858
>gi|254558918|ref|YP_003066013.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
gi|254266196|emb|CAX21953.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
Length = 874
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/861 (52%), Positives = 598/861 (69%), Gaps = 23/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN + +T + + A LA G+ Q P HL LL DP G+ A I+ AGG++
Sbjct: 1 MNFENYTERARGFVQAAQNLAVREGNPQLAPGHLLKVLLDDPEGLCAGLIDRAGGQSRVA 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A+ Q + K P + + A+ L+++ A+ A + GD+++ V++L+L
Sbjct: 61 HAQ--VEQWLAKQPKVSGNAAQPQATRELVRLFDTAEQAAEKAGDSYVTVERLLLAFAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+D + G + AGV A + + + LR +GR ++AS + + ALK Y RDL E A G
Sbjct: 119 KDGEAGRILTAAGVTAASLNAAINALR--KGRTADNASAENAYDALKKYARDLTEAAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L +
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKEK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
L+ALDMGAL+AGAKYRGEFEERLK VL EV AEG++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 SLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGQIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+DN+
Sbjct: 357 KYEQHHGVRIQDSALVAAATLSNRYITDRFLPDKAIDLVDEAGSRLRMQVDSKPEELDNV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ ++L+IE AL+KE D AS+ RL + KEL DL ++ + R+K EK+++ L
Sbjct: 417 DREIVRLKIEGEALKKETDSASRDRLQRLEKELADLEEQSATITARWKAEKDKLGAAAEL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTETVG 533
K+K +E L A+R+ RA +L YG I +E + ++E + M+ E V
Sbjct: 477 KKKLDEARNELASAQRQGQYQRAGELAYGVIPGLEKQLSEIEAAAESAVARDGMVEEAVT 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
P IA VVSRWTG+PV ++ + E+E R++G EAV AV+ +V R+RAGL
Sbjct: 537 PAHIAGVVSRWTGVPVDKMLEGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQ 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTEL KALA LFDD+ LVRIDMSEYME+H+V+RLIGAPPG
Sbjct: 597 DPNRPIGSFMFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVARLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 657 YVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++IMTSNLG+E+L++ G+ T V RD+V+ VR HFRPE LNR+DEI++F L+ ++
Sbjct: 717 LLIMTSNLGSEYLVNQPAGQDT-DVVRDEVMGVVRGHFRPEFLNRVDEIILFHRLARSEM 775
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ +A L +R + L V A + + YDP YGARP++R ++K V L+
Sbjct: 776 GAIVDIQLGRLAKLLEDRKITLDVDGEARTWLADKGYDPAYGARPLKRVIQKNVQDPLAE 835
Query: 823 MLVREEIDENSTVYIDASPKG 843
++ I + TV + G
Sbjct: 836 AILSGVIHDGETVMVRTGEAG 856
>gi|352094640|ref|ZP_08955811.1| ATP-dependent chaperone ClpB [Synechococcus sp. WH 8016]
gi|351680980|gb|EHA64112.1| ATP-dependent chaperone ClpB [Synechococcus sp. WH 8016]
Length = 863
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/859 (52%), Positives = 612/859 (71%), Gaps = 28/859 (3%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG-GEN 57
M P ++FT K AI A +LA + H HL ALL D G+ + ++ AG
Sbjct: 1 MQPTAEQFTEKAWSAIMSAQQLAQNRRHQHLESEHLLRALL-DQEGLAGRILDKAGVSPP 59
Query: 58 AAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
A Q+A + + + PS T APD + L ++ RA+ +++ GD+ ++++ L+L L
Sbjct: 60 ALQTAVDTY---LSQQPSLTNAPDSVFLGKGLNALLDRAETLKQSFGDSFISIEHLLLAL 116
Query: 118 LEDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+D + G LF +AG +R+K+ + +RG + KV + + T+++L+ YGRDL A
Sbjct: 117 ADDGRCGRQLFSQAGTDSSRLKTAINAVRGSQ--KVTDQNPEGTYESLEKYGRDLTSAAR 174
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L
Sbjct: 175 DGKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPQALQ 234
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ +LIALDMGAL+AGAKYRGEFEERLKAVLKEV +EG+++LFIDEIH V+GAG T G+M
Sbjct: 235 NRQLIALDMGALIAGAKYRGEFEERLKAVLKEVTNSEGQIVLFIDEIHTVVGAGATGGAM 294
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA+NL KPMLARG+LRCIGATTL+E+R+++EKD A ERRFQQV V +P+V DT+SILRGL
Sbjct: 295 DASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVMVDQPTVEDTISILRGL 354
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGVRI D ALV AA LS+RYI R LPDKAIDLVDE+ A +++++ S+PEEID
Sbjct: 355 KERYEVHHGVRIADSALVAAAVLSSRYIADRFLPDKAIDLVDESAARLKMEITSKPEEID 414
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
++RK +QLE+E +L +E D AS+ RL + +EL +L ++ L ++++EK IDE+
Sbjct: 415 EIDRKILQLEMEKLSLGRESDAASQERLQRLERELAELSEQQSTLNAQWQQEKGAIDELS 474
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE-----GNQSDENLMLT 529
LK+ E + +++A+R YDL +AA+L YG + ++ + E +++ E +L
Sbjct: 475 ALKEDIERVQLQVEQAKRSYDLNKAAELEYGTLAGLQKQLLSQEQALAATDETAEKSLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSR 578
E V D IAEV+++WTGIPV +L Q+E ER++G +AV AVA+++ RSR
Sbjct: 535 EEVSEDDIAEVIAKWTGIPVAKLVQSEMEKLLKLEDQLHERVVGQDQAVTAVADAIQRSR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P QP SFLFLGPTGVGKTEL+KALA QLFD E+ LVRIDMSEYME+H+VSRLIG
Sbjct: 595 AGLSDPNQPIASFLFLGPTGVGKTELSKALAAQLFDSEDALVRIDMSEYMEKHTVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+E GGQLTEA+RRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTVD
Sbjct: 655 APPGYVGYEAGGQLTEAIRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F N V+I+TSN+G++ +L Q +V +R HFRPE LNR+D+ ++F L
Sbjct: 715 FTNAVLILTSNIGSQSILDLGGDDNQHQEMESRVNDALRSHFRPEFLNRIDDTIIFHSLR 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++LR + LQ++ + RL+ER + L +++ A D + YDP+YGARP++R +++++ T
Sbjct: 775 RDELRLIVALQVERLRQRLSERKLGLNISEEATDWLANAGYDPVYGARPLKRAIQRELET 834
Query: 819 ELSRMLVREEIDENSTVYI 837
+++ ++ +E S+V I
Sbjct: 835 PIAKAILAGAYEEGSSVQI 853
>gi|225569241|ref|ZP_03778266.1| hypothetical protein CLOHYLEM_05323 [Clostridium hylemonae DSM
15053]
gi|225162040|gb|EEG74659.1| hypothetical protein CLOHYLEM_05323 [Clostridium hylemonae DSM
15053]
Length = 887
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/857 (52%), Positives = 613/857 (71%), Gaps = 27/857 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ +A+ A G+ + HL ALL + + + G E
Sbjct: 24 MNINKFTQKSLQAVQDCERTAMEYGNQEIEQEHLLYALLVQDDSLILKLMEKMGVEKTV- 82
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
N+ + L +T + L K + A+ K GD +++V+ L L LL+
Sbjct: 83 ----FINRVEEGLRKRTKVQGGQAFVGQDLNKALIHAEDEAKQMGDEYVSVEHLFLSLLK 138
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ ++ +F+E G+ + +RG + KV S + + T+ L YG DLVE+A
Sbjct: 139 YPNKELKVIFRELGIKRDLFLQALATVRGSQ--KVTSDNPEATYDTLNKYGSDLVERARD 196
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR +VRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 197 QKLDPVIGRDSEIRNLVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEALKD 256
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ +LDMGALVAGAKYRGEFEERLKAVL+EV+ ++GK+ILFIDE+H ++GAG+T+G+MD
Sbjct: 257 KTIFSLDMGALVAGAKYRGEFEERLKAVLEEVKNSDGKIILFIDELHTIVGAGKTDGAMD 316
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V D +SILRGLK
Sbjct: 317 AGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVLVDEPTVEDAISILRGLK 376
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 377 ERYEVFHGVKITDGALVAAATLSDRYISDRFLPDKAIDLVDEACALIKTELDSMPAELDE 436
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+RK MQLEIE AL+KE+D+ SK RL +++EL +LR++ ++ EK +++ +++
Sbjct: 437 LQRKIMQLEIEEAALKKEEDRLSKDRLGHLQQELAELREQFAGKKAQWDNEKVKVERVQK 496
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
++++ E++ +Q+A++ YDL +AA+L+YG + +++ + + EG DE L E+V
Sbjct: 497 VREEIEQVNKEIQKAQQSYDLEKAAELQYGRLPQLKKQLEEEEGKIKDEERSLVHESVTD 556
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
++IA +VSRWTGIPV RL ++E+ R+IG E V V E+++RS+AG+
Sbjct: 557 EEIARIVSRWTGIPVARLNESERSKTLHLADELHRRVIGQEEGVELVTEAIIRSKAGIKD 616
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAKALAE LFDDEN +VRIDMSEYME++SVSRLIGAPPGY
Sbjct: 617 PGKPIGSFLFLGPTGVGKTELAKALAESLFDDENNMVRIDMSEYMEKYSVSRLIGAPPGY 676
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 677 VGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTI 736
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSN+G+ +LL G+ G ++ Q +++ V+ ++R HFRPE LNRLDE+++F PL+ E
Sbjct: 737 LIMTSNIGSAYLLDGIDEAGNIS-QESQNAVMDDLRAHFRPEFLNRLDEMIMFKPLTKEN 795
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L +DV RLA++ +++++T+AA ++V+ YDP YGARP++R+L+K V T +
Sbjct: 796 IYAIIDLLTEDVNKRLADKEISISLTEAAKNMVVEGGYDPTYGARPLKRYLQKNVETLAA 855
Query: 822 RMLVREEIDENSTVYID 838
+++++ +I T+ ID
Sbjct: 856 KLMLQGDIGAGETIVID 872
>gi|392571483|gb|EIW64655.1| hypothetical protein TRAVEDRAFT_25762 [Trametes versicolor
FP-101664 SS1]
Length = 899
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/862 (51%), Positives = 603/862 (69%), Gaps = 35/862 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSG---------IFAQAINNAGG 55
FT KT E++A A +LA +AQ P H+ LL++ G +F I+ AGG
Sbjct: 6 NFTDKTQESLAAAIQLAKDYANAQVHPAHIGFVLLNEAQGEGASSGAHSLFTSVIDKAGG 65
Query: 56 ENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
+ A R + + +LP+Q+P P+EI S+ +KV+R A + +K D+++A D ++
Sbjct: 66 DPLA--VRRGLQKLIVRLPTQSPPPEEISLSSAAMKVLREADSLRKTMHDSYIAQDHILA 123
Query: 116 GLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L++DS I + KEAG+ +K+ +E++RG R+V++ + + F AL Y DL A
Sbjct: 124 ALIKDSSIQPILKEAGLTEDVLKTAIEQIRGN--RRVDTKNAEQGFDALNKYATDLTALA 181
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRD EIRR +RIL RRTKNNPVLIGEPGVGK+A+ EGLAQRIV DVP++L
Sbjct: 182 EEGKLDPVIGRDNEIRRAIRILCRRTKNNPVLIGEPGVGKSAIAEGLAQRIVNRDVPASL 241
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEA--EGK-VILFIDEIHLVLGAGRT 290
RL +LDMGAL+AGAKY+GE+EER+K+VL EVE+A EG +ILFIDE+HL++
Sbjct: 242 I-ARLYSLDMGALMAGAKYKGEYEERIKSVLNEVEKASEEGTGIILFIDELHLIMAGRGG 300
Query: 291 EGS-MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVS 349
EG MDAANLFKP+LARG+LRCIGATTL EYRKY+E D A ERRF QV + EPSVP+T+S
Sbjct: 301 EGGGMDAANLFKPLLARGKLRCIGATTLSEYRKYIETDPALERRFAQVLINEPSVPETIS 360
Query: 350 ILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQ 409
ILRG++EKYE HHGVRI D AL+ AA L+ RY+T R LPD AIDLVDEACA+VRV ++
Sbjct: 361 ILRGIREKYEVHHGVRIHDGALIAAATLAHRYLTSRRLPDSAIDLVDEACASVRVTRETA 420
Query: 410 PEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKER 469
PE ID L+R++++LE+E+HALE+EKD ASK RL+ RK + D+ D+L+PL Y+ EK R
Sbjct: 421 PEAIDKLQRRKLELEVEIHALEREKDDASKERLILARKAIADVEDQLKPLQAAYEAEKMR 480
Query: 470 IDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLML- 528
DEI ++++ +EL EAERRYDLA A+DLRY A+ +++ + QLE +++E+
Sbjct: 481 GDEINTVRRRIDELKAKADEAERRYDLATASDLRYYALPDLQNRLAQLEAKKAEEDSTHG 540
Query: 529 --TETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVL 575
T+TV PDQIAE+V+RWT IP TRL EKE+L +G EAV AVA ++
Sbjct: 541 SGTDTVTPDQIAEIVARWTNIPTTRLMSTEKEKLLRMEKILAESVVGQPEAVKAVANAIR 600
Query: 576 RSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSR 635
SR+GL +P SFLF GP+G GKT ++K LA LFD + ++RID SEY E+HS++R
Sbjct: 601 LSRSGLRNANRPIASFLFAGPSGTGKTLMSKTLATLLFDSPDAMIRIDGSEYSEKHSIAR 660
Query: 636 LIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGR 695
LIGAPPGYVGH++GGQLTE +RR+PYS+VL DE+EKA + LQVLDDGRLTDGQGR
Sbjct: 661 LIGAPPGYVGHDQGGQLTEYIRRKPYSIVLIDEIEKASREFYQLFLQVLDDGRLTDGQGR 720
Query: 696 TVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFD 755
VDFRNTVIIMTSNLGA L+ M R+ V+ +R HF PE +NR+DEIV+F
Sbjct: 721 IVDFRNTVIIMTSNLGAA-FLNDMGSGAVKPATRELVMGAIRNHFPPEFINRIDEIVIFR 779
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
LS + + K+ +++K+V RLA+R + L + DAA + +++ Y P YGARP+ R ++++
Sbjct: 780 TLSRQNVLKIVDIRLKEVQDRLADRKMTLELDDAAKNYLMSIGYSPAYGARPLNRAIQQE 839
Query: 816 VVTELSRMLVREEIDENSTVYI 837
++ LS M++ E + + TV I
Sbjct: 840 LLNPLSVMILSERVRDGETVRI 861
>gi|146297060|ref|YP_001180831.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410636|gb|ABP67640.1| ATPase AAA-2 domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 864
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/858 (50%), Positives = 612/858 (71%), Gaps = 24/858 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT A+ A A H + HL AL+++ + A+ + N G +
Sbjct: 1 MNMEKFTQSLQSALLEAQNTAILYKHQEIGVEHLHYALVNEDDKLIAKILKNMGIN--TE 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+R +KK+P P + + L +++ RA+ K D +++V+ + L +++
Sbjct: 59 IYKRDIEDQLKKIPMVYGPGASAVYVNRFLNEILLRAEDEAKKFKDEYISVEHVYLAMID 118
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+F++ G+ + ++ K+RG +++ + + + T++ LK YGRDL + A
Sbjct: 119 YDHPSAKTMFRKYGINREKFLQQLYKIRG--NQRITNPNPEETYEVLKKYGRDLTDLARK 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L D
Sbjct: 177 GKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ ALD+GAL+AGAKYRGEFEERLKAVL E+ +EG++ILFIDEIH ++GAGR EG+MD
Sbjct: 237 KTIFALDLGALIAGAKYRGEFEERLKAVLNEIMASEGRIILFIDEIHNIVGAGRAEGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+L CIGATT++EYR+Y+EKDAA ERRFQ V V PSV DT+SILRGLK
Sbjct: 297 AGNLLKPMLARGELHCIGATTIDEYRRYIEKDAALERRFQPVLVNPPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E++E HHGVRI D AL+ AA+LS RYIT R LPDKAIDL+DEA A +R ++DS P E+D
Sbjct: 357 ERFEIHHGVRITDDALIAAAKLSDRYITDRFLPDKAIDLIDEAAALLRTEIDSMPTELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ RK MQL IE + L+KE++ ++K RL E+ KE+ +L D+ L +++ EKE I E+R+
Sbjct: 417 ITRKIMQLRIEKNVLQKEENPSTKQRLEEIDKEIAELNDRANQLSAQWEYEKELIKEVRK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTETV 532
+K++ E++ ++EAER YDL + ++L+YG + E++ + Q E +L E V
Sbjct: 477 IKEEIEDVKIKIEEAERNYDLNKLSELKYGRLLELQKRLEQKRQEIEKIPPEKRLLKEEV 536
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGL 581
++IA++VS+WTGIPV +L + E++ R++G EAV AV +++R+RAG+
Sbjct: 537 TEEEIAKIVSKWTGIPVAKLVETERQKILELDKILHRRVVGQNEAVEAVCNAIMRARAGI 596
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P++P G+FLFLGPTGVGKTELA+ALAE LFD EN ++RIDM+EYME+HSVSRLIGAPP
Sbjct: 597 KDPRKPIGTFLFLGPTGVGKTELARALAEALFDSENNMIRIDMTEYMEKHSVSRLIGAPP 656
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVR +PYSVVLFDE+EKAH VFN LLQ++DDGRLTD +GRTVDF+N
Sbjct: 657 GYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHHDVFNILLQIMDDGRLTDSKGRTVDFKN 716
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
T+IIMTSNLG+E+LL+ + + + R + +E++ HFRPE LNRLDEI++F PL+ E
Sbjct: 717 TIIIMTSNLGSEYLLNANISNGEIDENTRKLIDRELKTHFRPEFLNRLDEIIIFRPLTKE 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q+ K+ L++ ++ +L E+G+++A+T A + V+ ++D +GARPI+R+L+K V T +
Sbjct: 777 QIIKIIDLRVAEIQQKLIEKGISIALTSKAKEYVMENAFDVNFGARPIKRFLQKNVETLI 836
Query: 821 SRMLVREEIDENSTVYID 838
+R +++ I E + +D
Sbjct: 837 AREILKGTIKEGDNIKVD 854
>gi|257440882|ref|ZP_05616637.1| ATP-dependent chaperone protein ClpB [Faecalibacterium prausnitzii
A2-165]
gi|257196662|gb|EEU94946.1| ATP-dependent chaperone protein ClpB [Faecalibacterium prausnitzii
A2-165]
Length = 875
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/876 (51%), Positives = 619/876 (70%), Gaps = 33/876 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQ---AINNAGGEN 57
MN +++T KT EA+ A +LA H P HL AL S G+ Q +N G
Sbjct: 6 MNTNQYTQKTLEALQAAQQLAVEYQHNALEPEHLLHALASQEQGLIPQLLQKLNVDPGSF 65
Query: 58 AAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
AA AE++ A+ ++ PD++ S KV+ A KA D +++V+ + LGL
Sbjct: 66 AAAVAEKL--SALPRVSGSGRDPDKVYISQATDKVLSAAAREAKAMKDEYVSVEHVFLGL 123
Query: 118 LED--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L++ +LF+ + ++ +RG + +V + + + T+ AL+ YG+DLV+ A
Sbjct: 124 LDEPTQNTTELFRAFNIKKDAFLQQLTAVRGNQ--RVTNDNPEDTYNALQKYGQDLVDLA 181
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD+EIR V+RILSR+TKNNP LIGEPGVGKTA+ EGLAQRIVRGDVP NL
Sbjct: 182 RKQKLDPVIGRDQEIRNVIRILSRKTKNNPCLIGEPGVGKTAIAEGLAQRIVRGDVPENL 241
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ + +LDMGALVAGAKYRGEFEERLK+VL EV+++EGK+ILFIDE+H ++GAG+T+G+
Sbjct: 242 KNRTVFSLDMGALVAGAKYRGEFEERLKSVLNEVKKSEGKIILFIDELHTIVGAGKTDGA 301
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQ V V EP+V DT+SILRG
Sbjct: 302 MDAGNLLKPMLARGELHCIGATTLDEYRQYIEKDPALERRFQPVQVDEPTVEDTISILRG 361
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HGV+I D AL+ AA LS RYIT R LPDKAIDLVDEACA ++ ++DS P E+
Sbjct: 362 LKERYEVFHGVKISDNALIAAATLSDRYITDRFLPDKAIDLVDEACAMIKTEMDSMPSEM 421
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D+L + QL+IE +L+KE D S++RL E+ KEL +L+DK + + +++ EK I ++
Sbjct: 422 DDLAHRITQLQIEQVSLKKETDALSQSRLHELEKELAELQDKFRSMKAKWENEKNAIGKV 481
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLMLTET 531
+ L+++ E+ A+++A+R YDL +AA+L+YG + E++ + E N+ E+ +L +
Sbjct: 482 QTLREQIEQTNAAIEKAQREYDLNKAAELKYGKLPELQKQLEAEEKLANEKKEDSLLRDR 541
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IA +V+RWTGIPV +L + E+E+L IG EAV V+E++LRSRAG
Sbjct: 542 VTDEEIARIVARWTGIPVEKLVEGEREKLLHLDDVLHKRVIGQDEAVTKVSEAILRSRAG 601
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P +P GSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDM+EYME+ SVSRLIGAP
Sbjct: 602 IANPNRPIGSFLFLGPTGVGKTELAKALAQALFDDERNMVRIDMTEYMEKFSVSRLIGAP 661
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+
Sbjct: 662 PGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFK 721
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTM------QVARDQVLQEVRKHFRPELLNRLDEIVVF 754
NTVII+TSNLG++ +L+ + + A+ Q+ +R FRPE LNRLDEIV +
Sbjct: 722 NTVIILTSNLGSDIILNDLEQRRAQGSNELSDEAKHQIDLLLRSKFRPEFLNRLDEIVYY 781
Query: 755 DPLSHEQLRKVARLQMKDVAIRLAE-RGVALAVTDAALDIVLAESYDPIYGARPIRRWLE 813
L+ +++RK+ LQ+ D+ R+ E + + L VT AA D ++ +YD +YGARPI+R+++
Sbjct: 782 KSLTKDEMRKIVDLQLADLRSRMDEGKHLNLDVTTAAKDYIIDSAYDSVYGARPIKRFIQ 841
Query: 814 KKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
+V T +++ +++ E ST+ +D G+ LV +
Sbjct: 842 SRVETLIAKAIIQGRYAEGSTLTVDYD--GNALVLK 875
>gi|284929770|ref|YP_003422292.1| ATPase family protein associated with various cellular activities
(AAA) [cyanobacterium UCYN-A]
gi|284810214|gb|ADB95911.1| ATPase family protein associated with various cellular activities
(AAA) [cyanobacterium UCYN-A]
Length = 867
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/856 (50%), Positives = 613/856 (71%), Gaps = 27/856 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE-NAAQ 60
+P+KFT K EAI ++A H Q HL + L + + N A + N Q
Sbjct: 5 DPNKFTLKVWEAIVETPKIAKENKHQQIETEHL-MKFLIKKDELSIRVFNKANVDINKVQ 63
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
F + P + + + + +L K+ +++ ++ D +++++ ++L + D
Sbjct: 64 DITEKF---ISNQPKVSNSIESVYLGYSLDKLFDKSENFRQEFQDNYISIEHILLAYIYD 120
Query: 121 SQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
++ G DLFK+ ++ ++ ++++RG+ +KV + + ++AL YGRDL + A GK
Sbjct: 121 NRFGIDLFKQINLSKEHLEKVIKEIRGE--KKVIDQNPEVNYEALTKYGRDLTKLAEEGK 178
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D +
Sbjct: 179 LDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLRDRK 238
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
LI LDMG+L+AGAKYRGEFEERLKAVLKEV +++G +ILFIDEIH V+GAG T+G+MDA
Sbjct: 239 LIVLDMGSLIAGAKYRGEFEERLKAVLKEVIDSQGSIILFIDEIHTVVGAGATQGAMDAG 298
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KPMLARG+LRCIGATTL EYRKY+EKDAA ERRFQ V + EP+V DT+SILRGLKE+
Sbjct: 299 NLLKPMLARGELRCIGATTLNEYRKYIEKDAALERRFQSVIIDEPNVIDTISILRGLKER 358
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGV+I D ALV AA LS RYI+ R LPDKAIDL+DE+ A +++++ S+PE++D ++
Sbjct: 359 YEVHHGVKIADTALVAAAVLSDRYISDRFLPDKAIDLIDESAAKLKIEITSKPEKLDEID 418
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK +QLE+E +L KE+D S RL + KE+ DL+ + L R++ EK ID+I +LK
Sbjct: 419 RKILQLEMERLSLNKEEDHLSCERLKILEKEISDLKQEQFDLNSRWQTEKTLIDQILKLK 478
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE----GNQSDENLMLTETVG 533
+ +++ +Q++ER YDL +AA+LRYG + ++ I +LE NQ+ ++L E V
Sbjct: 479 KTIDQVNLEIQQSERDYDLNKAAELRYGKLSTLQKQIKELEDKTVNNQN--KILLREEVV 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERLIGL-----------AEAVNAVAESVLRSRAGLG 582
P IAE++SRWTGIP+ +L Q+EKE+L+ L EAV AVA+S+ RSRAGL
Sbjct: 537 PSDIAEIISRWTGIPLNKLVQSEKEKLLNLEDDLHEKIVGQEEAVTAVADSIQRSRAGLA 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P++P SFLFLGPTGVGKTELAKALA+ LFD E +VRIDMSEYME+H++SRLIGAPPG
Sbjct: 597 DPKRPIASFLFLGPTGVGKTELAKALAKSLFDTEESIVRIDMSEYMERHTISRLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQL+EA+RR PY+V+LFDE+EKAH +FN +LQ+LDDGRLTD QGRTV+F+NT
Sbjct: 657 YVGYDEGGQLSEAIRRHPYAVILFDEIEKAHADIFNIMLQILDDGRLTDSQGRTVNFKNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IIMTSN+G++++L + +V++ V+ +FRPE LNR+DE+++F L QL
Sbjct: 717 IIIMTSNIGSQYILDVVDDDSRYSEMYSRVVKTVQNNFRPEFLNRIDEMIIFHGLQRSQL 776
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
R + +LQ + ++ RL E+ + + ++D+ALD ++ YDP+YGARP++R ++K + T +++
Sbjct: 777 RDIVKLQTQLLSNRLEEQNIYIQLSDSALDFIVNVGYDPVYGARPLKRAIQKYLETPIAK 836
Query: 823 MLVREEIDENSTVYID 838
+L++ E T+++D
Sbjct: 837 LLLKGEFVGEDTIFVD 852
>gi|154252203|ref|YP_001413027.1| ATPase [Parvibaculum lavamentivorans DS-1]
gi|154156153|gb|ABS63370.1| ATPase AAA-2 domain protein [Parvibaculum lavamentivorans DS-1]
Length = 880
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/861 (52%), Positives = 604/861 (70%), Gaps = 26/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
M+ +K+T ++ I A LA +GH +FTP HL LL D G+ A I AGG + A
Sbjct: 1 MDLEKYTDRSRGFIQSAQGLAVRSGHQRFTPEHLLKVLLDDEEGLAAGLIRAAGGRPDQA 60
Query: 59 AQSAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
Q E A+ K+P + ++ + + KV +A++ K GD+++ ++L+L +
Sbjct: 61 LQGVE----TALSKMPKVEGSGAGQLYLAPEIAKVFDQAESLAKKAGDSYVTAERLLLAM 116
Query: 118 L--EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L ++ + K AG+ + + +E +R +GR +SAS + + ALK Y RDL A
Sbjct: 117 LLTPGTESEKILKTAGITAQSLNAAIESVR--KGRTADSASAEDAYDALKKYARDLTADA 174
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L
Sbjct: 175 RSGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAITEGLALRIVNGDVPESL 234
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ L+ALD+GAL+AGAKYRGEFEERLKAVL EV A+G +ILFIDE+H ++GAG+T+G+
Sbjct: 235 KNKSLMALDLGALIAGAKYRGEFEERLKAVLAEVSSADGGIILFIDEMHQLVGAGKTDGA 294
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA+NL KP LARG L C+GATTL+EYRKYVEKDAA RRFQ V+V EP+V DT+SILRG
Sbjct: 295 MDASNLLKPALARGDLHCVGATTLDEYRKYVEKDAALARRFQPVFVNEPTVEDTISILRG 354
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKEKYE HHGVRI D ALV AA LS RYI+ R LPDKAIDL+DEA A +R+Q+DS+PEE+
Sbjct: 355 LKEKYELHHGVRISDAALVAAATLSDRYISDRFLPDKAIDLMDEASARLRMQVDSKPEEL 414
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D ++R+ +QL+IE AL+KEKD+AS+ RL ++ EL DL K L + EK ++
Sbjct: 415 DEIDRRVIQLKIEREALKKEKDQASRDRLEKIELELADLEKKSADLAAAWSAEKSKLASA 474
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVG 533
+++K++ + L +A+R L RA++L YG I +E +G+ E + + ML E V
Sbjct: 475 QKIKEELDNARNELVQAQRAGKLERASELAYGIIPGLEKKLGETE-KREEAGAMLEEAVT 533
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERLIGL-----------AEAVNAVAESVLRSRAGLG 582
IA+VVSRWTGIPV ++ + E+E+LIG+ AEAV+AV+ +V R+RAGL
Sbjct: 534 EQHIAQVVSRWTGIPVDKMLEGEREKLIGMEKALGARIVGQAEAVSAVSRAVRRARAGLQ 593
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTEL KALAE LFDD+ +VR+DMSEYME+HSV+RLIGAPPG
Sbjct: 594 DPNRPIGSFLFLGPTGVGKTELTKALAEFLFDDDQAIVRLDMSEYMEKHSVARLIGAPPG 653
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRN
Sbjct: 654 YVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNV 713
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IIMTSNLGAE+L G+ ++ R+QV+ VR FRPE LNRLDEI++F L+ EQ+
Sbjct: 714 LIIMTSNLGAEYLAEQKAGE-DVEAVREQVMDVVRSRFRPEFLNRLDEILLFHRLTREQM 772
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +QM + L +R + + + D A + + YDP+YGARP++R +++ + L+
Sbjct: 773 DTIVDIQMGRLRSLLKDRKIEIELDDTARTWLADQGYDPVYGARPLKRVIQRNLQDPLAE 832
Query: 823 MLVREEIDENSTVYIDASPKG 843
+L+ +I + TV + A G
Sbjct: 833 LLLLGKIADGETVKVSAGATG 853
>gi|389576708|ref|ZP_10166736.1| ATP-dependent chaperone ClpB [Eubacterium cellulosolvens 6]
gi|389312193|gb|EIM57126.1| ATP-dependent chaperone ClpB [Eubacterium cellulosolvens 6]
Length = 865
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/874 (51%), Positives = 624/874 (71%), Gaps = 29/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+FT K+ EAI + A G+ + HL LL + AQ I AG + +
Sbjct: 1 MQLDRFTQKSQEAIQSLQKAALDFGNQEIEQEHLIYVLLEQEDSLIAQLIQKAGIDRSVF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+E A+ K + I L + A K GD +++V+ L L +L +
Sbjct: 61 RSE--VEAALNKRTKVSGGQQYI--GQYLNNTLNYASDEAKRMGDEYISVEHLFLAMLRE 116
Query: 121 SQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ ++F+ G+ + + ++ +RG + KV + + + T+ +L+ YG DLVE+A
Sbjct: 117 PSPSVKEIFRTFGLTMEKFLEALQSVRGNQ--KVTTDNPEETYDSLRKYGSDLVEKAREQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DP+IGRDEEIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVP NL D
Sbjct: 175 KMDPIIGRDEEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPDNLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMGALVAGAKYRGEFEERLKAVL EV+++EG++ILFIDE+HL++GAG+T+G+MDA
Sbjct: 235 TIFSLDMGALVAGAKYRGEFEERLKAVLNEVKKSEGRIILFIDELHLIVGAGKTDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KP+LARG+L CIGATTL EYR+Y+EKDAA ERRFQ+V V EP+V +T++ILRGL+E
Sbjct: 295 GNLLKPLLARGELHCIGATTLNEYREYIEKDAALERRFQRVLVDEPTVDETITILRGLRE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
Y+ +H VRI D AL+ AA LS RYIT R LPDKAIDL+DEACA ++ + DS+PEEID L
Sbjct: 355 AYQTYHTVRITDNALIAAATLSDRYITDRFLPDKAIDLIDEACAQIKTEKDSKPEEIDEL 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
E + +QL+++ +LEKE D S RL V+KEL + +L+ L +++ EK+ +D +L
Sbjct: 415 EHRNLQLKLDEMSLEKETDALSVERLQTVKKELAENEARLKTLNAQWENEKQAVDRPAQL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+ + ++ ++ AER+ DLA+ + L+YG + ++E + + EG ++L L E+V D
Sbjct: 475 RDQIADIHKQMELAERKGDLAKMSALQYGELPKLEKELAEEEGKIRKDDLKLVHESVDED 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA +VSRWTGIPV RL Q EK R+IG EAV VA++++RS+AG+ P
Sbjct: 535 EIAAIVSRWTGIPVARLTQGEKNKILNLGTELHRRVIGQDEAVEKVADAIIRSKAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAK LAE+LFDDEN +VRIDMSEYME++SVSRLIGAPPGYV
Sbjct: 595 TRPIGSFLFLGPTGVGKTELAKTLAEKLFDDENNMVRIDMSEYMEKYSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRRRPYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT++
Sbjct: 655 GYDEGGQLTEAVRRRPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTIL 714
Query: 705 IMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+++LL G+ G++ AR+ V+ ++R HFRPE LNRLDEI++F PL+ + +
Sbjct: 715 IMTSNIGSQYLLEGIGEDGEIN-DSARELVMGDLRGHFRPEFLNRLDEIILFRPLTKDNI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ LQ+ D+ RLA + +A+ +T+ A + ++ E YDP+YGARP++R+++K + T +R
Sbjct: 774 GHIIDLQIADLNRRLAAQQLAIELTENAKERIVEEGYDPVYGARPLKRYMQKHIETLAAR 833
Query: 823 MLVREEIDENSTVYIDASPKGD-NLVYRVQKNGG 855
M++ E+ E +T+ I+A GD +LV V++ GG
Sbjct: 834 MILGGEVLEGNTIVINA---GDGDLVAEVRQKGG 864
>gi|423382682|ref|ZP_17359938.1| chaperone ClpB [Bacillus cereus BAG1X1-2]
gi|401644602|gb|EJS62291.1| chaperone ClpB [Bacillus cereus BAG1X1-2]
Length = 866
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/874 (52%), Positives = 627/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
QSAE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQSAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFARLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|291549496|emb|CBL25758.1| ATP-dependent chaperone ClpB [Ruminococcus torques L2-14]
Length = 861
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/858 (51%), Positives = 613/858 (71%), Gaps = 29/858 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
MN +KFT + +A+ ++A G+ + HL ALL+ + + N G+
Sbjct: 1 MNINKFTQNSLQAVQNCEKIAADNGNQELAQEHLLYALLTQDDSLILKLFEKMNIQGQLF 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
S E QA+ K P + L V+ A+ K GD +++V+ L L +L
Sbjct: 61 INSIE----QAIGKRPKVQGG--QAYVGQDLNNVLIHAEDEAKQMGDEYVSVEHLFLAML 114
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ ++ +F+E G++ + +RG + +V S + + T+ L YG+DLVE+A
Sbjct: 115 KYASRELKQIFREYGISREGFLHALSTVRGNQ--RVTSDNPEATYDTLNKYGQDLVEKAR 172
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
KLDPVIGRDEEIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP L
Sbjct: 173 DQKLDPVIGRDEEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVSGDVPEGLK 232
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + +LDMGALVAGAKYRGEFEERLKAVL+EV+ ++GK+ILFIDE+H ++GAG+T+G+M
Sbjct: 233 DKTIFSLDMGALVAGAKYRGEFEERLKAVLEEVKNSDGKIILFIDELHTIVGAGKTDGAM 292
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V D +SILRGL
Sbjct: 293 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVLVDEPTVEDAISILRGL 352
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HGV+I D ALV A LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 353 KERYEVFHGVKITDSALVAAVTLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELD 412
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L R+ MQ+EIE AL+KE+D+ SK RL +++EL +L+ + ++++ EK ++ ++
Sbjct: 413 ELRRRVMQMEIEESALKKEEDRLSKERLEHLQEELAELKAQYASKKVQWENEKNSVEHVQ 472
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVG 533
+++++ E++ +Q+A+R YDL +AA+L+YG + +++ + + E ++L L E+V
Sbjct: 473 KIREQIEQVNKEIQKAQREYDLNKAAELQYGRLPQLQKQLEEEEAKVKAKDLSLVHESVT 532
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
D+IA++VSRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+
Sbjct: 533 DDEIAKIVSRWTGIPVAKLNESERNKTLHLADELHKRVIGQDEGVELVTEAIIRSKAGIK 592
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAKALA+ LFDDEN +VRIDMSEYME++SVSRLIGAPPG
Sbjct: 593 DPTKPIGSFLFLGPTGVGKTELAKALAQSLFDDENNMVRIDMSEYMEKYSVSRLIGAPPG 652
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT
Sbjct: 653 YVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNT 712
Query: 703 VIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
++IMTSN+GA +LL G+ G + Q +++ V+ +++ HFRPE LNRLDEI++F PL+
Sbjct: 713 ILIMTSNIGANYLLEGIKDDGSIDEQ-SQEMVMGDLKAHFRPEFLNRLDEIIMFKPLTKT 771
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+R + L + DV RL ER +++ +TDAA D V+ Y+P+YGARP++R+L+K V T
Sbjct: 772 NVRSIIDLLVADVNRRLEERELSVELTDAAKDFVVEGGYEPMYGARPLKRYLQKNVETLA 831
Query: 821 SRMLVREEIDENSTVYID 838
+++++ ++ T+ ID
Sbjct: 832 AKLILAGDVGRGDTILID 849
>gi|189218123|ref|YP_001938765.1| ATP-binding subunits of Clp protease ClpB [Methylacidiphilum
infernorum V4]
gi|189184981|gb|ACD82166.1| ATP-binding subunits of Clp protease ClpB [Methylacidiphilum
infernorum V4]
Length = 869
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/868 (53%), Positives = 619/868 (71%), Gaps = 47/868 (5%)
Query: 4 DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAE 63
++FT K EAIA + +AT GH HL AL++ G+ + + G
Sbjct: 2 NRFTEKAQEAIAESQAIATHYGHQVVDVEHLLEALIAQEGGLIPRLLERCG------IPL 55
Query: 64 RVFNQAMK----KLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
++F + ++ K P + T A S +++ +A+ K D +++V+ L+L +
Sbjct: 56 KIFREELEGELEKFPRITGTTATTGNYISQRFSELLVKAREEAKRLKDEYVSVEHLLLAM 115
Query: 118 LEDSQ---IGDLFKEAGV---AVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL 171
LE+S +G LF+ G+ A+ RV +EV RG + +V S + + T++AL+ YGRDL
Sbjct: 116 LEESSKTVVGRLFRSHGLTREALLRVLTEV---RGSQ--RVTSPNPEVTYEALEKYGRDL 170
Query: 172 VEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDV 229
+ A GKLDPVIGRD EIRR +++L RRTKNNPVLIGEPGVGKTA+VEG+AQRIV+GDV
Sbjct: 171 TKLAELGKLDPVIGRDSEIRRTIQVLCRRTKNNPVLIGEPGVGKTAIVEGIAQRIVKGDV 230
Query: 230 PSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGR 289
P +L R++ALDMGAL+AGAKYRGEFEERLKAVLKE+ ++G++ILFIDEIH V+GAG+
Sbjct: 231 PESLKSRRIVALDMGALIAGAKYRGEFEERLKAVLKEISSSQGQIILFIDEIHTVVGAGK 290
Query: 290 TEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVS 349
EG++DA N+ KPMLARG+L CIGATTL+EYRKY+EKDAA ERRFQ V V EPSV DT+S
Sbjct: 291 AEGAIDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDAALERRFQPVLVEEPSVEDTIS 350
Query: 350 ILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQ 409
ILRGLK +YE HHGVRI+D ALV AA LS RYI+ R LPDKAIDLVDEA A ++ +++S
Sbjct: 351 ILRGLKNRYEVHHGVRIRDSALVAAAVLSHRYISDRFLPDKAIDLVDEAAAKLKTEIESM 410
Query: 410 PEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKER 469
PEE+++LERK +QLEIE AL+KEKD+AS+ RL E+ KEL + R + L ++ EK
Sbjct: 411 PEELESLERKVLQLEIEREALKKEKDEASQLRLKELEKELAETRAERDRLKAHWEGEK-- 468
Query: 470 IDEIRRLKQKREELLFALQE---AERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN- 525
I +L+Q REEL A QE A+R YDL + A+LRYG I + I +LE S++
Sbjct: 469 -GAIIKLQQLREELQKAEQEMEKAQREYDLNKVAELRYGKIPVLNKQIQELESKISEKGE 527
Query: 526 ---LMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVA 571
M+ E V PD IAE+VSRWTGIPV+RL + EKE+L +G EAV AV
Sbjct: 528 SKERMIQEEVTPDLIAEIVSRWTGIPVSRLLEGEKEKLLKLDQILHKRVVGQDEAVQAVT 587
Query: 572 ESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQH 631
+++LR+R+GL P++P GSF+FLGPTGVGKTELA++LAE LFD E ++R+DMSEYME+H
Sbjct: 588 DAILRARSGLKDPKRPIGSFIFLGPTGVGKTELARSLAEALFDSEENMIRLDMSEYMEKH 647
Query: 632 SVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTD 691
+V+RLIGAPPGYVG EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LQ+L+DGRLTD
Sbjct: 648 TVARLIGAPPGYVGFEEGGQLTEAVRRKPYSVLLLDEIEKAHPEVFNLFLQILEDGRLTD 707
Query: 692 GQGRTVDFRNTVIIMTSNLGAEHLL-SGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDE 750
G GRTVDFRNT+IIMTSN+G+ +L + + G V R +++ E+R FRPE LNR+DE
Sbjct: 708 GHGRTVDFRNTIIIMTSNIGSVYLTEAALAGGVIPDHVRAKIMDELRAVFRPEFLNRIDE 767
Query: 751 IVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRR 810
+V+F PLS ++++++ LQ+ + RL E+ + + ++DAA + + E Y P+YGARP+RR
Sbjct: 768 VVIFKPLSLKEIKQIVDLQVVLLKNRLKEKYIEIELSDAAKEHLAQEGYSPVYGARPLRR 827
Query: 811 WLEKKVVTELSRMLVREEIDENSTVYID 838
++K++ T LSR +++ EI E+ V ID
Sbjct: 828 VIQKELETPLSRKIIQGEIAEHDHVCID 855
>gi|206967764|ref|ZP_03228720.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus AH1134]
gi|365161970|ref|ZP_09358106.1| chaperone ClpB [Bacillus sp. 7_6_55CFAA_CT2]
gi|423415025|ref|ZP_17392145.1| chaperone ClpB [Bacillus cereus BAG3O-2]
gi|423429192|ref|ZP_17406196.1| chaperone ClpB [Bacillus cereus BAG4O-1]
gi|206736684|gb|EDZ53831.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus AH1134]
gi|363619629|gb|EHL70943.1| chaperone ClpB [Bacillus sp. 7_6_55CFAA_CT2]
gi|401097083|gb|EJQ05113.1| chaperone ClpB [Bacillus cereus BAG3O-2]
gi|401123170|gb|EJQ30953.1| chaperone ClpB [Bacillus cereus BAG4O-1]
Length = 866
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/874 (52%), Positives = 626/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEEIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKSIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|291543530|emb|CBL16639.1| ATP-dependent chaperone ClpB [Ruminococcus champanellensis 18P13]
Length = 868
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/858 (51%), Positives = 610/858 (71%), Gaps = 23/858 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
MN +K T K+ EAI A+ LA G+ Q HL +ALLS G+ Q I G +
Sbjct: 1 MNTEKLTQKSMEAIRSANSLAVEYGNQQIDQAHLFLALLSQQDGLIPQIIPQMGTDLQML 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A+R+ +Q + K+ PD++ + K + A+ A + D +++V+ L LGL+
Sbjct: 61 QTEAQRLVDQ-LPKVSGSGREPDKVYVTPGTDKALNAAEKAAQRMQDEYVSVEHLFLGLI 119
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ + ++ L K + ++ + ++ +RG KV S + + T+ LK YG+DLVE A
Sbjct: 120 QTAEGKLAQLLKSHDLTEQKLLTVLQTVRG--STKVTSDNPEGTYNVLKKYGQDLVELAK 177
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
KLDPVIGRDEEIR V+RILSR+TKNNPVLIGEPGVGKTA+ EGLA RIVRGDVP +L
Sbjct: 178 NNKLDPVIGRDEEIRNVIRILSRKTKNNPVLIGEPGVGKTAIAEGLALRIVRGDVPGSLK 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D R+ +LDMGALVAGAKYRGEFEERLKAVL+E+ + EGK ILFIDE+HL++GAG+T+G+M
Sbjct: 238 DHRIFSLDMGALVAGAKYRGEFEERLKAVLQEIRKTEGKTILFIDELHLIVGAGKTDGAM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRGL
Sbjct: 298 DAGNILKPMLARGELHCIGATTLNEYRQYIEKDAALERRFQPVMVNEPTVEDTISILRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HGV+IQD+AL+ AA LS RYIT R LPDKAIDLVDEACA ++ +++S P E+D
Sbjct: 358 KERYEVFHGVKIQDQALIAAATLSNRYITDRFLPDKAIDLVDEACAMIKTEMESMPTEMD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L R+ MQ EIE AL+KE D SK L +++KEL ++R + + +++ EK I +++
Sbjct: 418 ELSRRIMQHEIEETALKKETDNLSKEHLEQIQKELAEMRSRFDEMKAKWQNEKNAITKVQ 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLMLTETV 532
L+ + E + +++A R D +AA+L+Y + +++ + + E N + +L + V
Sbjct: 478 SLRAEVESVKGEIEQATRNADYNKAAELQYSKLPQLQKELEEEEKIANAKKDASLLRDKV 537
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGL 581
+IA ++ RWTGIPV +L + E+++L+G+ EAV V+E++LRSRAG+
Sbjct: 538 TEQEIARIICRWTGIPVAKLMEGERQKLLGMESILHQRVIGQDEAVEKVSEAILRSRAGI 597
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTELAKALAE LFDDE +VRIDMSEYME++SVSRLIGAPP
Sbjct: 598 QDPDRPIGSFLFLGPTGVGKTELAKALAEALFDDERNIVRIDMSEYMEKYSVSRLIGAPP 657
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+N
Sbjct: 658 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRITDSQGRTVDFKN 717
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
T+II+TSNLG++ +L+G+ + AR+QV +++ FRPE LNRLDEIV + PL+
Sbjct: 718 TIIILTSNLGSDAILNGITADNQISPEAREQVEALLKRQFRPEFLNRLDEIVFYKPLAKA 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++ + L +KD+ RLA++ + L VTD A D ++ YDP+YGARP++R++++K+ T +
Sbjct: 778 EIGAIVDLMLKDLEKRLADKQITLRVTDKAKDHIIECGYDPLYGARPLKRYIQQKLETLI 837
Query: 821 SRMLVREEIDENSTVYID 838
+R ++ +++ + +D
Sbjct: 838 ARAIIGDQLRTSGVAVVD 855
>gi|338708620|ref|YP_004662821.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336295424|gb|AEI38531.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
Length = 864
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/872 (52%), Positives = 613/872 (70%), Gaps = 30/872 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K T + I A +A H + P HL ALL D G+ + I AGG+
Sbjct: 1 MNFEKLTDRAKGFIQSAQTVAIRLNHQRIAPEHLLKALLEDEQGMASGLIRRAGGDPTI- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPAS--TTLIKVIRRAQAAQKAHGDTHLAVDQLILG-- 116
A R + A+ K+PS + + P I+++ +A+ GD+++ V++L+L
Sbjct: 60 -AVRETDAALSKIPSVSGSGANTPPGLDNDAIRLLDQAEQVATKAGDSYVTVERLLLAMT 118
Query: 117 LLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
LL ++ +G + K+AG+ + + + +LR GR ++AS + + ALK + RDL E A
Sbjct: 119 LLPETTVGKILKDAGLKAEALNTAINELRS--GRTADTASAEDRYDALKKFARDLTEAAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRR V+IL+RRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP L
Sbjct: 177 EGKLDPVIGRDEEIRRTVQILARRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEGLR 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D L+ALDMG+L+AGAKYRGEFEERLK VL EV++++G++ILFIDE+H ++GAG+++G+M
Sbjct: 237 DRVLMALDMGSLIAGAKYRGEFEERLKGVLDEVKQSDGQIILFIDEMHTLIGAGKSDGAM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KP LARG+L CIGATTL+EYRKYVEKD A +RRFQ VYV EP+V DT+SILRGL
Sbjct: 297 DAGNLLKPALARGELHCIGATTLDEYRKYVEKDPALQRRFQPVYVGEPTVADTISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KEKYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEEI+
Sbjct: 357 KEKYEAHHGVRITDAALVSAATLSNRYITNRFLPDKAIDLVDEAASRLRMEVDSKPEEIE 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+L+R+ +QL+IE AL KE D+AS+ RL + +L DL + L R+K E+++I
Sbjct: 417 SLDRRIIQLKIEREALRKEDDEASRDRLKTLEHDLGDLEQQSSELTARWKNEQDKIKAEA 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD-ENLMLTETVG 533
RLK+K + AL++AER DL +A +L YG I ++E QL Q++ + ML E V
Sbjct: 477 RLKEKLDHARIALEQAERSGDLTKAGELSYGIIPQLEK---QLSDAQNEAQGAMLREEVT 533
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
IA +VSRWTGIPV ++ + E+E+L IG AEAV AV+ +V RSRAGL
Sbjct: 534 SQDIASIVSRWTGIPVDKMLEGEREKLVHMEDILGKRVIGQAEAVKAVSRAVRRSRAGLQ 593
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTEL KALA LFDD+ +VRIDMSE+ME+H+V+RLIGAPPG
Sbjct: 594 DPNRPMGSFLFLGPTGVGKTELTKALASFLFDDDRAMVRIDMSEFMEKHAVARLIGAPPG 653
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDF NT
Sbjct: 654 YVGYEEGGVLTEAVRRRPYQVILFDEVEKAHQDVFNILLQVLDDGRLTDGQGRTVDFSNT 713
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+I++TSNLGA++ L+ + +++ +V++ VR HFRPE LNRLDEI++F L E +
Sbjct: 714 LIVLTSNLGAQY-LANLSDDESVESVEPKVMEVVRAHFRPEFLNRLDEIILFHRLGQEHM 772
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ + LA+R + L ++D A + YDP+YGARP+RR +++ + L+
Sbjct: 773 GPIVDIQVNRLCKLLADRKITLELSDKARAWLGRVGYDPVYGARPLRRAVQRYLQDPLAE 832
Query: 823 MLVREEIDENSTVYIDASPKGD-NLVYRVQKN 853
L++ EI + TV +D +GD +L+++ +++
Sbjct: 833 ELLKGEIHDGQTVKVD---EGDSHLIFKTEES 861
>gi|126734040|ref|ZP_01749787.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Roseobacter
sp. CCS2]
gi|126716906|gb|EBA13770.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Roseobacter
sp. CCS2]
Length = 871
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/857 (52%), Positives = 601/857 (70%), Gaps = 21/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT ++ + A +A H + P HL AL+ D G+ + I AGG A
Sbjct: 1 MNLEKFTERSRGFVQAAQTIAMRESHQRLAPEHLLKALMDDEEGLASNLITRAGGNPTAV 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-LE 119
A + ++ K+P + ++ KV+ A+ K GD+ + V++L+ L L
Sbjct: 61 LA--AVDASLAKIPQVSGEGAQVYLDNVTAKVVDEAEKVAKKAGDSFVPVERLLTALALV 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
S+ D V + + + +R +GR +SA+ + +F+AL Y RDL E A GK
Sbjct: 119 KSKAKDALDAGNVTAQALNAAINDIR--KGRTADSATAEDSFEALAKYARDLTEAAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DP+IGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RI+ GDVP +L + +
Sbjct: 177 IDPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIIDGDVPESLRNKK 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ALDMGAL+AGAKYRGEFEERLKAVLKE+E A G++ILFIDE+H ++GAG+ +G+MDAA
Sbjct: 237 LMALDMGALIAGAKYRGEFEERLKAVLKEIEAAAGEIILFIDEMHTLVGAGKADGAMDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L C+GATTL+EYRKYVEKDAA RRFQ + V EP+V DTVSILRG+KEK
Sbjct: 297 NLIKPALARGELHCVGATTLDEYRKYVEKDAALARRFQPLMVEEPTVTDTVSILRGIKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+++DS+PEE+D L+
Sbjct: 357 YELHHGVRISDSALVAAATLSHRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEELDALD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL+IE AL+KE DKASK RL ++ KEL DL D+ + +++ E+++++ R +K
Sbjct: 417 RQILQLQIESEALKKEDDKASKDRLEKLEKELADLNDRASEMTAKWQTERDKLESTRDVK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+K + L A+R +LA+A +L YG I E+E + Q+E D++LM+ E V P+QI
Sbjct: 477 EKLDRARAELDIAKREGNLAKAGELSYGVIPELERLVAQVE--DGDDDLMVEEAVRPEQI 534
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEVV RWTGIP +++ + E+++L IG AV +VA +V R+RAGL +
Sbjct: 535 AEVVERWTGIPTSKMLEGERDKLLRMEEELGKRVIGQKTAVRSVANAVRRARAGLNDENR 594
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KA+AE LFDD++ +VRIDMSE+ME+H+V+RLIGAPPGYVG+
Sbjct: 595 PLGSFLFLGPTGVGKTELTKAVAEYLFDDDSAMVRIDMSEFMEKHAVARLIGAPPGYVGY 654
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
+EGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDG LTDGQGRTVDF+ T+II+
Sbjct: 655 DEGGVLTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIIL 714
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLGA+ L G + RD V+ VR HFRPE LNRLDE V+FD L+ E + +
Sbjct: 715 TSNLGAQSLSQLPDGADAAEAKRD-VMDAVRAHFRPEFLNRLDETVIFDRLAREDMAGIV 773
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q+ +A RLA R V L + DAAL + E YDP++GARP++R +++ + +L+ M++
Sbjct: 774 TIQLGLLAKRLAGRNVHLDLDDAALKWLADEGYDPVFGARPLKRVIQRALQDQLAEMILA 833
Query: 827 EEIDENSTVYIDASPKG 843
++ + T+ + A G
Sbjct: 834 GDVMDGDTISVSAGVDG 850
>gi|295104191|emb|CBL01735.1| ATP-dependent chaperone ClpB [Faecalibacterium prausnitzii SL3/3]
Length = 870
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/876 (51%), Positives = 619/876 (70%), Gaps = 33/876 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQ---AINNAGGEN 57
MN +++T KT EA+ A +LA H P HL AL + +G+ Q +N G
Sbjct: 1 MNTNQYTQKTLEALQAAQQLAVEYQHNALEPAHLLHALAAQENGLIPQLLQKLNVDPGSF 60
Query: 58 AAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
AA AE++ A+ ++ PD++ S KV+ A KA D ++V+ L LGL
Sbjct: 61 AAAVAEKL--SALPRVSGSGRDPDKVYISQATDKVLSAAAREAKAMKDDFISVEHLFLGL 118
Query: 118 L--EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L +D +LF+ + ++ +RG + +V + + + T+ AL+ YG+DLVE A
Sbjct: 119 LDEQDQTTSELFRAFNLKKDAFLQQLTAVRGNQ--RVTTDNPEDTYNALQKYGQDLVELA 176
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD+EIR V+RILSR+TKNNP LIGEPGVGKTA+ EGLAQRIVRGDVP NL
Sbjct: 177 RKQKLDPVIGRDQEIRNVIRILSRKTKNNPCLIGEPGVGKTAIAEGLAQRIVRGDVPENL 236
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ + +LDMGALVAGAKYRGEFEERLK+VL EV+++EGK+ILFIDE+H ++GAG+T+G+
Sbjct: 237 KNRTVFSLDMGALVAGAKYRGEFEERLKSVLNEVKKSEGKIILFIDELHTIVGAGKTDGA 296
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQ V V EP+V DT+SILRG
Sbjct: 297 MDAGNLLKPMLARGELHCIGATTLDEYRQYIEKDPALERRFQPVQVDEPTVEDTISILRG 356
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HGV+I D AL+ AA LS RYIT R LPDKAIDLVDEACA ++ ++DS P E+
Sbjct: 357 LKERYEVFHGVKINDSALIAAATLSDRYITDRFLPDKAIDLVDEACAMIKTEMDSMPSEM 416
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D+L + QL+IE +L+KE D S++RL ++ KEL +L+DK + + +++ EK I ++
Sbjct: 417 DDLAHRITQLQIEQVSLKKETDALSQSRLKDLEKELAELQDKFRSMKAKWENEKNAIGKV 476
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLMLTET 531
+ L+++ E+ A+++A+R YDL +AA+L+YG + +++ + + E E+ +L +
Sbjct: 477 QSLREQIEQTNAAIEKAQREYDLNKAAELKYGKLPQLQKQLAEEEKVAAAKKEDSLLRDR 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IA +V+RWTGIPV +L + E+E+L IG EAV V+E++LRSRAG
Sbjct: 537 VTDEEIARIVARWTGIPVEKLVEGEREKLLHLDDVLHQRVIGQDEAVTKVSEAILRSRAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P +P GSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDM+EYME+ SVSRLIGAP
Sbjct: 597 IANPNRPIGSFLFLGPTGVGKTELAKALAQALFDDERNMVRIDMTEYMEKFSVSRLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+
Sbjct: 657 PGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTM------QVARDQVLQEVRKHFRPELLNRLDEIVVF 754
NTVII+TSNLG++ +L+ + + + A+ Q+ ++ FRPE LNRLDEIV +
Sbjct: 717 NTVIILTSNLGSDIILNDLEQRRAQGSNELSEDAKHQIDLLLKSKFRPEFLNRLDEIVYY 776
Query: 755 DPLSHEQLRKVARLQMKDVAIRLAE-RGVALAVTDAALDIVLAESYDPIYGARPIRRWLE 813
L+ +++RK+ LQ++D+ R+ E + + L VT AA D ++ +YD +YGARPI+R+++
Sbjct: 777 KSLTKDEMRKIVDLQLQDLRNRMEEGKHLKLEVTTAAKDFIIDSAYDSVYGARPIKRFIQ 836
Query: 814 KKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
+V T +++ +++ E +T+ +D G LV R
Sbjct: 837 SRVETLIAKAIIKGGYAEGNTLTVDYD--GSALVLR 870
>gi|158522706|ref|YP_001530576.1| ATPase [Desulfococcus oleovorans Hxd3]
gi|158511532|gb|ABW68499.1| ATPase AAA-2 domain protein [Desulfococcus oleovorans Hxd3]
Length = 862
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/869 (52%), Positives = 610/869 (70%), Gaps = 29/869 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DK T K E + A A + GH Q P HL A+L + +GI A + G +
Sbjct: 1 MRFDKLTIKAQELLQAAQSDAGARGHQQIEPEHLLFAMLEENTGIVASMLGKHGA--SVD 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ R +A++ +P + A E+ S V+ A A + D +++VD L L LL++
Sbjct: 59 AVRRDTAEALEAMPKISGAAAEVYISRRAKAVLDVAFAQAASMKDEYVSVDHLFLALLDE 118
Query: 121 --SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ + K+ GV + + +RG + +V + + ++AL+ Y RDL E A G
Sbjct: 119 KGGKAASILKQHGVTKDAMLKALLDIRGNQ--RVTDQNPEEKYKALEKYSRDLTELARQG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR+V++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDV L +
Sbjct: 177 KLDPVIGRDEEIRRIVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVSEGLKNK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
R++ALDM +L+AGAKYRGEFE+RLKAVLKEVE AEG +ILFIDE+H ++GAG +EG+MDA
Sbjct: 237 RIVALDMASLIAGAKYRGEFEDRLKAVLKEVERAEGSIILFIDELHTLVGAGASEGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+N+ KP LARG LRC+GATTL+EYRKY+EKDAA ERRFQ V+ EP V DT+SILRGLKE
Sbjct: 297 SNMLKPALARGSLRCVGATTLDEYRKYIEKDAALERRFQPVFTGEPDVTDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGV+I+D ALV AA LS RYIT R LPDKAIDLVDE + +R+++DS P EID +
Sbjct: 357 KYEVHHGVKIKDAALVAAATLSDRYITDRFLPDKAIDLVDECASKMRIEIDSMPAEIDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK +Q EIE AL+KE DK S+ RL + +EL L++ L + +EK I IR +
Sbjct: 417 HRKIVQSEIEKEALKKESDKESRKRLGALEEELARLKEDHAELKAHWDREKGMIQTIRGI 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTETV 532
K++ EEL A Q+AER+ D A+AA++RYG E +EA +L Q+D+ ML E V
Sbjct: 477 KKEIEELGVAQQQAERQGDFAKAAEIRYGKSVELNKKLEATEKELAAFQADKK-MLKEEV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGL 581
+ IAEVVSRWTGIPV+++ + E+E R++G EAV+AV+++V RSR+GL
Sbjct: 536 DAEDIAEVVSRWTGIPVSKMMEGEREKLVHMEDRLALRVVGQNEAVSAVSDAVRRSRSGL 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTELAKALAE LFD E ++R+DMSEYME+H+V+RLIGAPP
Sbjct: 596 QDPNRPIGSFIFLGPTGVGKTELAKALAEFLFDSEQ-VIRVDMSEYMEKHAVARLIGAPP 654
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGG LTE+VRRRPYSVVLFDE+EKAH VFN LLQ+LDDGR+TDG GRTVDF+N
Sbjct: 655 GYVGYEEGGYLTESVRRRPYSVVLFDEIEKAHPDVFNILLQLLDDGRMTDGHGRTVDFKN 714
Query: 702 TVIIMTSNLGAEHLLSGMM-GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
T++IMTSN+G+ HL+ M ++Q+ +R++F+PE LNR+DEI+VF L +
Sbjct: 715 TIVIMTSNVGS-HLIQEMSRANEDPDQVKEQITDVLRQNFKPEFLNRIDEIIVFHNLDRD 773
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q+ K+ +Q++ + R AERGV++ ++DAA + + YDP+YGARP++R ++K + L
Sbjct: 774 QIAKIVEIQVQRLGKRTAERGVSIVLSDAAKRFIAEKGYDPVYGARPLKRMIQKHIENPL 833
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYR 849
+ +++ I ENST+ +D +GD +V+R
Sbjct: 834 AMEILKGNIPENSTISVDV--EGDGIVFR 860
>gi|340027306|ref|ZP_08663369.1| ATPase [Paracoccus sp. TRP]
Length = 872
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/857 (51%), Positives = 611/857 (71%), Gaps = 21/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT ++ + A +A + + P HL A++ D G + I AGG+ AQ
Sbjct: 1 MDMEKFTERSRGFLQAAQTIAIREDNQRVMPEHLLKAMMDDEQGFASNLIARAGGD--AQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-LE 119
+ + +QA+ K P + ++ T+L++V+ A+ K GD+ + ++++ L +
Sbjct: 59 AVRQAVDQAVAKQPKISGGQGQVYVDTSLVRVLDEAENLAKKAGDSFVPAERVLTALAVV 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
++ D V + + + ++R +GR +SA + +++AL Y R+L E A GK
Sbjct: 119 NTNARDALTAGKVTAQALNAAINEIR--KGRTADSAGAEDSYEALSKYARNLTEAAAEGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DP+IGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L + +
Sbjct: 177 IDPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLRNKQ 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L ALDMGAL+AGAKYRGEFEERLK+VLKE+E A G++ILFIDE+H+++GAG+T+G+MDAA
Sbjct: 237 LWALDMGALIAGAKYRGEFEERLKSVLKEIETAAGEIILFIDELHVLVGAGKTDGAMDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L C+GATTL+EYRKY+EKDAA RRFQ V V EP+V DT+SILRG+KEK
Sbjct: 297 NLIKPALARGELHCVGATTLDEYRKYIEKDAALARRFQPVLVQEPTVEDTISILRGIKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEE+D L+
Sbjct: 357 YELHHGVRISDAALVAAATLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDQLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL+IE AL+KE D AS+ RL ++ ++L DL++K L R++ E+ +++ R LK
Sbjct: 417 RQILQLQIEAEALKKEDDAASRDRLEKLERQLSDLQEKSAGLTARWQAERAKLEGSRTLK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
++ + L +A+R +LARA +L YG I +E + E N+ + LM+ ETV P+QI
Sbjct: 477 EQLDRARAELDQAKREGNLARAGELSYGIIPSLERQLADAESNE--DGLMVEETVRPEQI 534
Query: 538 AEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEVV RWTGIP +++ + E++ R+IG EAV AVA +V R+RAGL P++
Sbjct: 535 AEVVERWTGIPTSKMLEGERDKLLKMEEVLGKRVIGQTEAVGAVANAVRRARAGLNDPKR 594
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KA+AE LFDD++ +VRIDMSE+ME+HSV+RLIGAPPGYVG+
Sbjct: 595 PLGSFLFLGPTGVGKTELTKAIAEYLFDDDSAMVRIDMSEFMEKHSVARLIGAPPGYVGY 654
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
+EGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDG+LTDGQGRTVDF+ T+I++
Sbjct: 655 DEGGVLTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGQLTDGQGRTVDFKQTLIVL 714
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLGA+ L + G + Q AR QV+ VR HFRPE LNRLDEI++F L+ + +
Sbjct: 715 TSNLGAQALSTLPEGADSSQ-ARAQVMDAVRAHFRPEFLNRLDEIIIFHRLTRGNMDAIV 773
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
LQ+ + RLA+ + L + +AA + E YDP++GARP++R L++ + L+ M++
Sbjct: 774 GLQLAQLEGRLAQHKIMLDLDEAARKWLADEGYDPVFGARPLKRVLQRSLQNPLAEMILA 833
Query: 827 EEIDENSTVYIDASPKG 843
E+ + TV++ A P+G
Sbjct: 834 GEVLDGQTVHVTAGPEG 850
>gi|163815341|ref|ZP_02206716.1| hypothetical protein COPEUT_01505 [Coprococcus eutactus ATCC 27759]
gi|158449315|gb|EDP26310.1| ATP-dependent chaperone protein ClpB [Coprococcus eutactus ATCC
27759]
Length = 858
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/859 (51%), Positives = 613/859 (71%), Gaps = 34/859 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQ-----AINNAGG 55
M DK+T K+ E + A E A + + T +HL LL + A+ +N G
Sbjct: 1 MEMDKYTRKSLEVVEKAKEKALEYDNQELTQMHLLAGLLEIDDSLIAKIFEKMGVNVTGA 60
Query: 56 ENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
NA + + +LP + + A K + +A+ K GDT+++V+ L L
Sbjct: 61 VNAVEDK-------LARLPKVSGG--NMYAGNNFSKALIQAEKEAKQMGDTYVSVEHLFL 111
Query: 116 GLLE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE 173
G+++ DS I +L K GV+ E+ ++RG KV+S +++++A++ +G DLVE
Sbjct: 112 GMVDKADSDIKELLKGWGVSRNAFLKELAEIRG--NHKVDSDDPESSYEAMEKFGYDLVE 169
Query: 174 QA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPS 231
+A KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRI+RGDVP
Sbjct: 170 RARQQKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRILRGDVPE 229
Query: 232 NLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTE 291
L + ++ ALDMGALVAGAKYRGEFEERLK VL EV+++EG+VI+FIDE+H ++GAG+T+
Sbjct: 230 GLKNKKIFALDMGALVAGAKYRGEFEERLKNVLDEVKKSEGEVIMFIDELHTIVGAGKTD 289
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
G+MDA N+ KPMLARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V EP+V DT+SIL
Sbjct: 290 GAMDAGNMLKPMLARGELHCIGATTLNEYRQYIEKDAALERRFQPVMVDEPTVEDTISIL 349
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RG+KE+YE HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LDS P
Sbjct: 350 RGIKERYEVFHGVKISDGALVSAAVLSNRYITDRFLPDKAIDLVDEACAMIKTELDSMPV 409
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
E+D + RK MQLEIE AL+KE+D SK RL +++ EL +L+D+ L +++ EK ++
Sbjct: 410 EVDEITRKIMQLEIEETALKKEEDNLSKQRLADLQAELAELKDQANSLKAKWENEKAAVE 469
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD-ENLMLTE 530
+IR LK++ E++ +Q+A+R YDL +AA+L+YG + ++ + + E SD E ++ E
Sbjct: 470 KIRILKEEMEQVKADIQDAQRNYDLNKAAELQYGKLPAIQKELAEAESTASDKERELVHE 529
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRA 579
V D+I+++VS+WTGIPV +L ++E K+R++G EAV+ V+++++RS+A
Sbjct: 530 VVSEDEISKIVSKWTGIPVAKLTESEKSKTLNLASELKKRVVGQDEAVDYVSDAIIRSKA 589
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P +P GSF+FLGPTGVGKTELAK+LA LFD+E +VRIDMSEYME+HSVSRLIGA
Sbjct: 590 GIKDPSKPIGSFIFLGPTGVGKTELAKSLAAALFDNEQNMVRIDMSEYMEKHSVSRLIGA 649
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF
Sbjct: 650 PPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDF 709
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSN+ ++ G++T ++ D V+ +++ FRPE LNR+DEI+ F LS
Sbjct: 710 KNTIIIMTSNI-GGADIAAAGGEITDELKND-VMAQLKSRFRPEFLNRIDEIITFRALSK 767
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
+ + + L M D+ RLA+R + + +T++A ++ + YD +YGARP++R+L+K V T
Sbjct: 768 DNISGIVDLLMADLNSRLADREITIKLTESAKQHIIDQGYDQVYGARPLKRYLQKNVETL 827
Query: 820 LSRMLVREEIDENSTVYID 838
+++M++ + S + ID
Sbjct: 828 VAKMILAGSVSTQSAIVID 846
>gi|385234857|ref|YP_005796199.1| ATPase AAA-2 [Ketogulonicigenium vulgare WSH-001]
gi|343463768|gb|AEM42203.1| ATPase AAA-2 [Ketogulonicigenium vulgare WSH-001]
Length = 870
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/872 (52%), Positives = 611/872 (70%), Gaps = 25/872 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT ++ + A +A GH + P H+ ALL DP G+ A IN AGG AA
Sbjct: 1 MNLEKFTERSRGFLQAAQTIAMREGHQRLLPEHILKALLDDPEGLSANLINRAGG--AAD 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-LE 119
+ A+ +LP + ++ + +V+ A+ GD+ + V++L+ L L
Sbjct: 59 RVREAVDLAVSRLPKVSGDAGQVYLDSLTGRVLDEAEQISTKAGDSFVTVERLLTALALV 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
S+ + V + + + +R +GR +SA + F ALK Y RDL E A GK
Sbjct: 119 KSKAKEALDAGAVTPQGLNTAINDIR--KGRTADSAGAEDGFDALKKYARDLTEDAAAGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DP+IGRDEEIRR +++LSRRTKNNP+LIGEPGVGKTA+ EGLA RI+ GDVP +L + +
Sbjct: 177 IDPIIGRDEEIRRAMQVLSRRTKNNPILIGEPGVGKTAIAEGLALRIINGDVPESLRNKK 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ALDMG+L+AGAKYRGEFEERLK++LKE+E A G+VILFIDEIH ++GAG+ +G+MDAA
Sbjct: 237 LLALDMGSLIAGAKYRGEFEERLKSILKEIEAAAGEVILFIDEIHTLVGAGKADGAMDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L C+GATTL+EYRKY+EKDAA RRFQ + VAEP+V DT+SILRG+KEK
Sbjct: 297 NLIKPALARGELHCVGATTLDEYRKYIEKDAALARRFQPIVVAEPNVEDTISILRGIKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AAQLS RYIT R LPDKAIDLVDEA + +R+++DS+PEE+D L+
Sbjct: 357 YELHHGVRISDSALVAAAQLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +Q +IE AL+KE D ASK RL ++ +EL DL+++ L +++ E+++++ R LK
Sbjct: 417 REVLQKQIEAEALKKEDDTASKDRLEKLERELSDLQERAASLTAKWQSERDQMEAARGLK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+K E+ L+ A+R +L +A +L YG I ++E I + + E++M+ ETV P+QI
Sbjct: 477 EKLEKARAELEIAKREGNLGKAGELSYGIIPQLERDIAAAD---TAESVMVEETVRPEQI 533
Query: 538 AEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEVV RWTGIP R+ + E++ R+IG EAV+AVA +V R+RAGL +
Sbjct: 534 AEVVERWTGIPTARMLEGERDKLLRMEDELGRRVIGQREAVHAVANAVRRARAGLNDENR 593
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KA+AE LFDD+ +VRIDMSE+ME+HSV+RLIGAPPGYVG+
Sbjct: 594 PLGSFLFLGPTGVGKTELTKAVAEFLFDDDTAMVRIDMSEFMEKHSVARLIGAPPGYVGY 653
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDG LTDGQGRTVDF+ T+I++
Sbjct: 654 EEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGMLTDGQGRTVDFKQTLIVL 713
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ LS + V A+D+V+ VR HFRPE LNRLDEI++FD LS + +
Sbjct: 714 TSNLGSQA-LSMLPEGVGKDEAKDEVMAAVRGHFRPEFLNRLDEIIIFDRLSRADMDGIV 772
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q+K + RLA R V LA+ +A + E YDP++GARP++R +++ + L+ ML+
Sbjct: 773 TIQLKRLENRLAARKVTLALDSSARTWLADEGYDPVFGARPLKRVIQRALQDPLASMLLS 832
Query: 827 EEIDENSTVYIDASPKGDNLVYRV---QKNGG 855
EI + + + + A G + RV QK+ G
Sbjct: 833 GEILDGTEIPVTAGAHGLVVGSRVADAQKDHG 864
>gi|229189360|ref|ZP_04316380.1| Chaperone protein clpB 1 [Bacillus cereus ATCC 10876]
gi|228594154|gb|EEK51953.1| Chaperone protein clpB 1 [Bacillus cereus ATCC 10876]
Length = 866
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/874 (52%), Positives = 627/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRLYITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEEIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E G+ EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGGHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + ++DAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELSDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|339021675|ref|ZP_08645681.1| Clp protease ATP-binding subunit ClpB [Acetobacter tropicalis NBRC
101654]
gi|338751322|dbj|GAA08985.1| Clp protease ATP-binding subunit ClpB [Acetobacter tropicalis NBRC
101654]
Length = 868
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/870 (52%), Positives = 613/870 (70%), Gaps = 26/870 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT ++ + A + + Q TP HL A+L D G + I AGG+ A
Sbjct: 1 MDIAKFTERSRGFLQAAQTICIRDFNQQLTPEHLLKAMLDDEEGAASSLIRAAGGKPEAV 60
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRA-QAAQKAHGDTHLAVDQLILGLL 118
A QA+ KLP Q + A+ L++V+ A QAAQKA GD+ +A D+L++G+
Sbjct: 61 KA--ATEQALAKLPKVQGGGAGQPQATPDLVRVLDGAEQAAQKA-GDSFVAQDRLLIGIA 117
Query: 119 E-DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QA 175
+ D+ G KE G ++ V +R +GR V S + + F ALK Y RD+ E QA
Sbjct: 118 QSDTPAGRALKENGATPDALEKAVAAIR--KGRTVTSENAEANFDALKKYARDVTEVAQA 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++L+RR+KNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 176 GKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEALKN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LDMGALVAGAKYRGEFEERLKAVLKE+E AEG++ILFIDE+H ++GAGRT+G+MD
Sbjct: 236 KKLLSLDMGALVAGAKYRGEFEERLKAVLKEIESAEGQIILFIDEMHTLVGAGRTDGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG L CIGATTL+EYRKY+EKDAA RRFQ V+V EPSV DT+SILRG+K
Sbjct: 296 ASNLIKPELARGTLHCIGATTLDEYRKYIEKDAALARRFQPVFVGEPSVADTISILRGIK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+D
Sbjct: 356 EKYELHHGVRITDGALVAAATLSNRYITDRFLPDKAIDLIDEAASRLRMQIDSKPEELDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE AL KE D ASK RL V EL DL +K + + EK+R++ +++
Sbjct: 416 LDRRIIQLKIEREALRKEDDSASKDRLEAVEAELADLEEKSDAMSASWHAEKDRVNAVQK 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD--ENLMLTETVG 533
L+++ ++ ++ A+R+ DL +A++L YG I ++A I Q + QS+ + +++E V
Sbjct: 476 LQEQLDQARSEVEVAQRKGDLGKASELMYGVIPNLQAQIAQAQETQSEAGKTDLVSEAVT 535
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
+A VVSRWTG+PV R+ + E+ +L +G A+ AV+ +V R+RAGL
Sbjct: 536 DQGVASVVSRWTGVPVDRMLEGERAKLLRMEDELRKSVVGQEPALKAVSNAVRRARAGLQ 595
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTEL KALA LFDDE L+R+DMSE+ME+H+V+RLIGAPPG
Sbjct: 596 DPNRPIGSFLFLGPTGVGKTELTKALARFLFDDEKALLRVDMSEFMEKHAVARLIGAPPG 655
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 656 YVGYEEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGRTVDFRNT 715
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+I++TSNLG++ L G+ T V + QV++ VR+HFRPE LNRLDEI++F L +
Sbjct: 716 IIVLTSNLGSDVLAHQPDGESTDMV-QAQVMKVVREHFRPEFLNRLDEIILFSRLQKADM 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
K+ +Q+ + L +R + L + + A + E YDP+YGARP++R +++ + L+
Sbjct: 775 TKIVDIQIGRLQKLLDDRKITLKLDELAHAWLANEGYDPVYGARPLKRVIQRSLQNPLAE 834
Query: 823 MLVREEIDENSTVYIDASPKGDNLVYRVQK 852
+L++ I + T+ I A+ GD L+ Q+
Sbjct: 835 LLLQGTIHDGETITISAN--GDGLLINGQE 862
>gi|885934|gb|AAB09631.1| ClpB [Synechococcus elongatus PCC 7942]
Length = 883
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/868 (50%), Positives = 628/868 (72%), Gaps = 29/868 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA-- 59
NP++FT K EAI ++A A H Q HL +ALL +P G+ + AG E A
Sbjct: 14 NPNQFTEKAWEAIVRTTDVAKQAQHQQIESEHLFLALLQEP-GLALNILKKAGLEAAQLQ 72
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
Q ER + + P + + +L +++ +A +K GD ++V+ LIL
Sbjct: 73 QFTERF----IARQPKVSGGNQSVYLGRSLDQLLDQADQFRKDFGDEFISVEHLILSFPR 128
Query: 120 DSQIGDLF-KEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
DS+ G L +E V +++ ++++RG + KV + + ++AL+ YGRDL E A G
Sbjct: 129 DSRFGRLLSQEFKVDEKQLRQIIQQIRGSQ--KVTDQNPEGKYEALEKYGRDLTEMARRG 186
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D
Sbjct: 187 KLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPQSLKDR 246
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RLIALDMGAL+AGAK+RGEFEERL AVLKEV ++EG +ILFIDE+H V+GAG +GSMDA
Sbjct: 247 RLIALDMGALIAGAKFRGEFEERLTAVLKEVTDSEGIIILFIDEMHTVVGAGAVQGSMDA 306
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL K MLARG+LRCIGATTL +YR+Y+EKDAA ERRFQQV+V +P+V DT+SILRGLKE
Sbjct: 307 GNLLKTMLARGELRCIGATTLGKYRQYIEKDAALERRFQQVFVDQPTVEDTISILRGLKE 366
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYI+ R LPDKAIDLVDE+ A +++++ S+PEE+D +
Sbjct: 367 RYEVHHGVRISDNALVAAAVLSTRYISDRFLPDKAIDLVDESAARLKMEITSKPEELDEI 426
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK +QLE+E +L+KE D AS+ RL + KEL DL+++ + L +++ EK+ I +I+ +
Sbjct: 427 DRKILQLEMERLSLQKESDLASQERLQRLEKELADLKEEQRSLSSQWQAEKDVITDIQSV 486
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG----NQSDENLMLTETV 532
K++ +++ +Q+AER YDL +AA+L+YG + E++ + ++EG + +L E V
Sbjct: 487 KEEIDQVNLLIQQAERDYDLNKAAELKYGKLTELQRKLNEMEGGLATTHTSGKSLLREEV 546
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGL 581
IAE++S+WTGIPV++L ++E +R+IG EAV+AVA+++ RSRAGL
Sbjct: 547 TEVDIAEIISKWTGIPVSKLVESEMQKLLNLDEELHQRVIGQEEAVSAVADAIQRSRAGL 606
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P++P SF+FLGPTGVGKTELAKALA LFD E+ ++RIDMSEYME+H+VSRLIGAPP
Sbjct: 607 SDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIGAPP 666
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD +GRTVDF+N
Sbjct: 667 GYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGRTVDFKN 726
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T++I+TSN+G++++L + R +V + +R +FRPE LNR+DE ++F L +Q
Sbjct: 727 TILILTSNIGSQYILDVAGDDSRYEEMRSRVTEALRANFRPEFLNRVDETIIFHSLRKDQ 786
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L+++ R+Q+ + RL++R ++L+++ A+D ++ +DP+YGARP++R +++++ T ++
Sbjct: 787 LQQIVRIQLHRLEERLSDRKLSLSMSPEAIDFLVEIGFDPVYGARPLKRVIQRELETAIA 846
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYR 849
+ ++R + + T+ + + + + LV++
Sbjct: 847 KAILRGQFSDGDTIQV--AVENERLVFK 872
>gi|403420047|emb|CCM06747.1| predicted protein [Fibroporia radiculosa]
Length = 907
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/867 (51%), Positives = 612/867 (70%), Gaps = 41/867 (4%)
Query: 6 FTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSD-------PSG--------IFAQAI 50
FT KT E++A A +LA +AQ P H+A LL++ P G +F I
Sbjct: 7 FTDKTQESLAAAIQLAKDYANAQVHPAHIAFVLLNEGGTDQAVPGGFSQQHSNSLFNSVI 66
Query: 51 NNAGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAV 110
AGG+ A +R + + ++P+Q+P PD+I S+ KV+R A++ +K D+++A
Sbjct: 67 QRAGGDPAL--VKRGLQRLIVRIPTQSPPPDDISLSSNASKVLRDAESLRKTMHDSYIAQ 124
Query: 111 DQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRD 170
D ++ L++D+ + + KEAG+ A +K+ +++LRG R+VES + + F AL+ Y D
Sbjct: 125 DHILAALIKDTSLAPVLKEAGLTEATLKTAIDQLRGN--RRVESKNAEQGFDALQKYAVD 182
Query: 171 LVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD 228
L A GKLDPVIGRD EIRR +RIL RRTKNNP+L+GEPGVGK+A+ EGLAQRIV D
Sbjct: 183 LTALAEEGKLDPVIGRDNEIRRAIRILCRRTKNNPILLGEPGVGKSAIAEGLAQRIVNRD 242
Query: 229 VPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEA--EGK-VILFIDEIHLVL 285
VP++L RL +LDMGAL+AGAKY+GE+EER+K+VL EVE+A EG VILFIDE+HL++
Sbjct: 243 VPASLLG-RLYSLDMGALMAGAKYKGEYEERVKSVLNEVEKASEEGTGVILFIDELHLIM 301
Query: 286 -GAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV 344
G G G MDAANLFKP+LARG+LRCIGATTL EYRKY+E DAA ERRF QV V EPSV
Sbjct: 302 AGRGAEGGGMDAANLFKPLLARGKLRCIGATTLAEYRKYIETDAALERRFAQVLVNEPSV 361
Query: 345 PDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRV 404
P+T+SILRG++EKYE HHGVRI D AL+ AA L+ RY+T R LPD AIDLVDEACA+VRV
Sbjct: 362 PETISILRGIREKYEVHHGVRIMDGALIQAATLAHRYLTSRRLPDAAIDLVDEACASVRV 421
Query: 405 QLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYK 464
++ PE ID L+R++++LE+E+HALE+EKD+ASK RL RK + D+ D+L+PL Y+
Sbjct: 422 TRETAPEAIDKLQRRKLELEVEIHALEREKDQASKERLEVARKAIADVEDQLRPLQAAYE 481
Query: 465 KEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE 524
EK R DEI+ +++K +EL EAERRYDLA A+DLRY A+ ++++ + QLE +++E
Sbjct: 482 TEKARGDEIQNVRRKIDELKAKADEAERRYDLATASDLRYYALPDLQSRLAQLETKKAEE 541
Query: 525 NLML---TETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAV 570
+ + T++V P+QIAE+V+RWT IPVTRL EKE+L +G EAV AV
Sbjct: 542 DAEMGGGTDSVTPEQIAEIVARWTNIPVTRLMSTEKEKLLRMEKILSEQVVGQPEAVKAV 601
Query: 571 AESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQ 630
A ++ SR+GLG Q+P SFL GP+G GKT L+K LA LFD + ++R+D SEY E+
Sbjct: 602 ANAIRLSRSGLGNAQRPIASFLMAGPSGTGKTLLSKTLATLLFDSPDAMIRVDGSEYSEK 661
Query: 631 HSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLT 690
HS++RLIGAPPGYVGH++GGQLTE +RR+PYS+VL DE+EKA LQVLDDGRLT
Sbjct: 662 HSIARLIGAPPGYVGHDQGGQLTEYIRRKPYSIVLIDEIEKASREFVTLFLQVLDDGRLT 721
Query: 691 DGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDE 750
DGQGR VDFRNTVIIMTSNLGA +L G V + ++ V+ +R HF PE +NR+DE
Sbjct: 722 DGQGRVVDFRNTVIIMTSNLGAAYLNDMGDGPVKSET-KELVMGAIRGHFPPEFINRIDE 780
Query: 751 IVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRR 810
IV+F LS + + K+ +++K+V RLA++ + L + A +++ Y PIYGARP+ R
Sbjct: 781 IVIFRTLSQKNVLKIVDVRLKEVQERLADKKMVLDIDGDAKQYLMSIGYSPIYGARPLNR 840
Query: 811 WLEKKVVTELSRMLVREEIDENSTVYI 837
++ +++ LS M++ + I E T+ I
Sbjct: 841 AIQSELLNPLSMMILSDRIREGETIQI 867
>gi|160944925|ref|ZP_02092152.1| hypothetical protein FAEPRAM212_02441 [Faecalibacterium prausnitzii
M21/2]
gi|158444109|gb|EDP21113.1| ATP-dependent chaperone protein ClpB [Faecalibacterium prausnitzii
M21/2]
Length = 870
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/876 (51%), Positives = 619/876 (70%), Gaps = 33/876 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQ---AINNAGGEN 57
MN +++T KT EA+ A +LA H P HL AL + +G+ Q +N G
Sbjct: 1 MNTNQYTQKTLEALQAAQQLAVEYQHNALEPAHLLHALAAQENGLIPQLLQKLNVDPGSF 60
Query: 58 AAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
AA AE++ A+ ++ PD++ S KV+ A KA D ++V+ L LGL
Sbjct: 61 AAAVAEKL--SALPRVSGSGRDPDKVYISQATDKVLSAAAREAKAMKDDFISVEHLFLGL 118
Query: 118 L--EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L +D +LF+ + ++ +RG + +V + + + T+ AL+ YG+DLVE A
Sbjct: 119 LDEQDQTTSELFRAFNLKKDAFLQQLTAVRGNQ--RVTTDNPEDTYNALQKYGQDLVELA 176
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD+EIR V+RILSR+TKNNP LIGEPGVGKTA+ EGLAQRIVRGDVP NL
Sbjct: 177 RKQKLDPVIGRDQEIRNVIRILSRKTKNNPCLIGEPGVGKTAIAEGLAQRIVRGDVPENL 236
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ + +LDMGALVAGAKYRGEFEERLK+VL EV+++EGK+ILFIDE+H ++GAG+T+G+
Sbjct: 237 KNRTVFSLDMGALVAGAKYRGEFEERLKSVLNEVKKSEGKIILFIDELHTIVGAGKTDGA 296
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQ V V EP+V DT+SILRG
Sbjct: 297 MDAGNLLKPMLARGELHCIGATTLDEYRQYIEKDPALERRFQPVQVDEPTVEDTISILRG 356
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HGV+I D AL+ AA LS RYIT R LPDKAIDLVDEACA ++ ++DS P E+
Sbjct: 357 LKERYEVFHGVKINDSALIAAATLSDRYITDRFLPDKAIDLVDEACAMIKTEMDSMPSEM 416
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D+L + QL+IE +L+KE D S++RL ++ KEL +L+DK + + +++ EK I ++
Sbjct: 417 DDLAHRITQLQIEQVSLKKETDALSQSRLKDLEKELAELQDKFRSMKAKWENEKNAIGKV 476
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLMLTET 531
+ L+++ E+ A+++A+R YDL +AA+L+YG + +++ + + E E+ +L +
Sbjct: 477 QTLREQIEQTNAAIEKAQREYDLNKAAELKYGKLPQLQKQLAEEEKVAAAKKEDSLLRDR 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IA +V+RWTGIPV +L + E+E+L IG EAV V+E++LRSRAG
Sbjct: 537 VTDEEIARIVARWTGIPVEKLVEGEREKLLHLDDVLHQRVIGQDEAVTKVSEAILRSRAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P +P GSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDM+EYME+ SVSRLIGAP
Sbjct: 597 IANPNRPIGSFLFLGPTGVGKTELAKALAQALFDDERNMVRIDMTEYMEKFSVSRLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+
Sbjct: 657 PGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTM------QVARDQVLQEVRKHFRPELLNRLDEIVVF 754
NTVII+TSNLG++ +L+ + + + A+ Q+ ++ FRPE LNRLDEIV +
Sbjct: 717 NTVIILTSNLGSDIILNDLEQRRAQGSNELSEDAKHQIDLLLKSKFRPEFLNRLDEIVYY 776
Query: 755 DPLSHEQLRKVARLQMKDVAIRLAE-RGVALAVTDAALDIVLAESYDPIYGARPIRRWLE 813
L+ +++RK+ LQ++D+ R+ E + + L VT AA D ++ +YD +YGARPI+R+++
Sbjct: 777 KSLTKDEMRKIVDLQLQDLRNRMEEGKHLKLEVTTAAKDFIIDSAYDSVYGARPIKRFIQ 836
Query: 814 KKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
+V T +++ +++ E +T+ +D G LV R
Sbjct: 837 SRVETLIAKAIIKGGYAEGNTLTVDYD--GSALVLR 870
>gi|153855348|ref|ZP_01996497.1| hypothetical protein DORLON_02511 [Dorea longicatena DSM 13814]
gi|149752168|gb|EDM62099.1| ATP-dependent chaperone protein ClpB [Dorea longicatena DSM 13814]
Length = 864
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/856 (52%), Positives = 611/856 (71%), Gaps = 25/856 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ +A+ +A G+ + HL ALL+ + A+ + G +
Sbjct: 1 MNINKFTQKSLQAVQNCERIAMDYGNQEIAQEHLLYALLTQDDSLIAKLMEKMGLDKNL- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
RV +A++K P + L + + KA GD +++V+ L L +++
Sbjct: 60 IINRV-EEAIQKRPKVQGGQQYV--GQDLNNALVHGEDEAKAMGDEYVSVEHLFLAMMKY 116
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ LF+E G++ + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 117 ASKDMKALFREVGISREGFLQALSTVRGNQ--RVTSDNPEDTYDTLNKYGTDLVERAREQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DPVIGRD EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L +
Sbjct: 175 KMDPVIGRDSEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLKEK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMGALVAGAKYRGEFEERLKAVL+EV+ ++G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 235 TIFSLDMGALVAGAKYRGEFEERLKAVLEEVKNSDGRIILFIDELHTIVGAGKTDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRGLKE
Sbjct: 295 GNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVEEPTVEDTISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA V+ +LDS P E+D L
Sbjct: 355 RYEVFHGVKITDGALVAAATLSDRYISDRFLPDKAIDLVDEACALVKTELDSMPAEMDEL 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK MQ+EIE AL+KE D+ SK RL +++EL +LRD+ ++ EK ++ +++L
Sbjct: 415 NRKIMQMEIEETALKKEDDRLSKERLEHLQQELAELRDEFAGKKAQWDNEKVGVERVQKL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+++ E++ ++ A+ YDL +AA+L+YG + +++ + + E DE+L L E+V +
Sbjct: 475 REEIEQVNKDIERAQHSYDLEKAAELQYGKLPQLQKQLEEEEAKVKDEDLSLVHESVNDE 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+I +VSRWTGIPV +L ++E+ +R+IG EAV V E+++RS+AG+ P
Sbjct: 535 EIGRIVSRWTGIPVAKLNESERSKTLHLGDELHKRVIGQDEAVELVTEAIIRSKAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALAE LFDDEN +VRIDMSEYME++SVSRLIGAPPGYV
Sbjct: 595 TKPIGSFLFLGPTGVGKTELAKALAENLFDDENNMVRIDMSEYMEKYSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRRRPYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT++
Sbjct: 655 GYDEGGQLTEAVRRRPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTIL 714
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+++LL GM G ++ Q +++ V++++R HFRPE LNRLDE ++F PL+ + +
Sbjct: 715 IMTSNIGSQYLLDGMDENGNIS-QESQNAVMEDLRAHFRPEFLNRLDETIMFKPLTKDNI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L + DV RLA+R +++ +T+ A V+ YDP YGARP++R+L+K V T ++
Sbjct: 774 YDIIDLLVADVNKRLADREISIFLTEDAKKYVVDGGYDPNYGARPLKRFLQKHVDTLAAK 833
Query: 823 MLVREEIDENSTVYID 838
++++ ++ T+ ID
Sbjct: 834 LMLQGDVGAQDTIIID 849
>gi|304394125|ref|ZP_07376048.1| ATP-dependent chaperone protein ClpB [Ahrensia sp. R2A130]
gi|303293565|gb|EFL87942.1| ATP-dependent chaperone protein ClpB [Ahrensia sp. R2A130]
Length = 884
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/866 (52%), Positives = 603/866 (69%), Gaps = 23/866 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN + +T + + A A + GH QFT H+ LL D G+ +Q I+ AGG+ A+
Sbjct: 1 MNLENYTERMRGFVQSAQSRALADGHQQFTAEHMLRVLLEDEQGLASQLIDRAGGD--AK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+A A+ KLP + + L KV +A+ K GD+ + V++ +L + +
Sbjct: 59 AALMATQAAVSKLPKVSGGGGGVYLGQGLAKVFEQAEKVAKKAGDSFVTVERFLLAMAME 118
Query: 121 SQIG--DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
S G + K AGV + +E +R +GR +SAS + + ALK Y +DL A G
Sbjct: 119 SGAGTHKILKAAGVTANGLNQAIESVR--KGRTADSASAEDGYDALKKYAQDLTALAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR V++LSRRTKNNPVLIGEPGVGKTA+ EGLA RI+ GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRAVQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIINGDVPESLRDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L++LDMG+L+AGAKYRGEFEERLKAVL EV A G +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 QLMSLDMGSLIAGAKYRGEFEERLKAVLSEVTAANGGIILFIDEMHTLVGAGKGDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+++EP+V DT+SILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFISEPTVEDTISILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+D L
Sbjct: 357 KYELHHGVRIADSALVAAATLSNRYITDRFLPDKAIDLMDEAGSRLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL KE D ASK RL ++ +L DL DK Q L ++ EK+++ R L
Sbjct: 417 DRRIIQLKIEREALSKESDTASKDRLEKLEADLSDLEDKAQELSAKWMSEKDKLSSARDL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K+K + L+ A+R +L RA +L YG I ++E I + EG++ DE M+ E V P
Sbjct: 477 KEKLDHARSELEIAQREGNLGRAGELSYGEIPQLERQIAEAEGSE-DEAQMVDEAVTPAS 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA VVSRWTGIPV ++ + E+E+L +G EAV AVA++V RSRAGL P
Sbjct: 536 IAHVVSRWTGIPVDKMLEGEREKLLAMEDELARRVVGQGEAVQAVAKAVRRSRAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA+ LFDD++ +VR+DMSE+ME+HSV+RLIGAPPGYVG
Sbjct: 596 RPMGSFIFLGPTGVGKTELTKALADYLFDDDSAMVRMDMSEFMEKHSVARLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 656 YDEGGVLTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLG+E+L++ G+ V RD V+ V+ FRPE LNR+DE ++F L + +
Sbjct: 716 MTSNLGSEYLVNLGEGEDVDGV-RDVVMDVVKASFRPEFLNRVDETILFHRLQKTNMAAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q++ + L ER +++ + A+ + + YDP YGARP++R ++ V L+ L+
Sbjct: 775 VEIQLRRLEKLLEERKISIELDGDAIQWLADKGYDPAYGARPLKRVIQSAVQDPLAEKLL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYRVQ 851
EI + +T+ I + D L +RV+
Sbjct: 835 AGEIGDGNTIAI--TSGSDKLQFRVK 858
>gi|261338715|ref|ZP_05966599.1| ATP-dependent chaperone protein ClpB [Bifidobacterium gallicum DSM
20093]
gi|270276270|gb|EFA22124.1| ATP-dependent chaperone protein ClpB [Bifidobacterium gallicum DSM
20093]
Length = 907
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/899 (52%), Positives = 615/899 (68%), Gaps = 33/899 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
T EA+ A + A +AG+ Q PLHL ALL +G+ I G + A+
Sbjct: 4 NLTRMAQEALGDALQSAAAAGNPQVDPLHLLDALLRQENGVVRGLIQAVGADPQKIGAQ- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE--DS 121
A+ LP+ + + P AS L I A K GD +++ + L+LG+L+ +
Sbjct: 63 -VRNALVALPAASGSSTAQPQASRQLSMTISNADKDMKEFGDEYVSTEMLLLGILQAAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
D+ GV A VK + ++RG G KV S + ++++L+ + +L E+A GKLD
Sbjct: 122 TAADILTSNGVTEAAVKKAIPEVRG--GAKVTSPDAEGSYKSLEKFSTNLTERAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVPS L + LI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPSTLQNKTLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL E+++++G++I FIDE+H ++GAG EGSMDA N+
Sbjct: 240 SLDLGSMVAGSKYRGEFEERLKSVLDEIKQSDGQIITFIDELHTIVGAGAAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 300 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI GR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTIGDDALVAAATLSNRYINGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ +L D R++L L R+ EK +++ L+ K
Sbjct: 420 VTRLEMEEMQLKKAEDAASKDRLGKLQNDLADTRERLSGLKARWDAEKAGHNKVGDLRAK 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL-------MLTETV 532
+E +A R DLA+A+ + YG I ++ + E E + M+ + V
Sbjct: 480 LDEKRVEADKATREGDLAKASRILYGEIPAIQKELADAEHTAEQEAVYAHETEPMVPDQV 539
Query: 533 GPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGL 581
D IA VV+ WTGIPV RL G+NEK +R+IG EAV AV+++V RSRAG+
Sbjct: 540 DADSIAGVVAEWTGIPVGRLMEGENEKLLRMEEFLGDRVIGQQEAVRAVSDAVRRSRAGI 599
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +PTGSFLFLGPTGVGKTELAKALAE LFDDE +VR+DMSEYME+ SVSRLIGA P
Sbjct: 600 SDPNRPTGSFLFLGPTGVGKTELAKALAEFLFDDERAMVRLDMSEYMEKASVSRLIGAAP 659
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRRRPYSVVLFDEVEKA+ VF+ LLQVLDDGRLTDGQGRTVDF+N
Sbjct: 660 GYVGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDILLQVLDDGRLTDGQGRTVDFKN 719
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T++IMTSNLG++ L+ M + + R V+ V FRPE LNRLDE V+F PL+ ++
Sbjct: 720 TILIMTSNLGSQFLVDPNMNE---EDKRKAVMAAVHSQFRPEFLNRLDEQVIFQPLTQKE 776
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L ++ LQ++ VA RL +R + L VT+AA D + YDP YGARP+RR ++ +V +L+
Sbjct: 777 LGRIVDLQVQQVASRLTDRRITLDVTEAARDWLAETGYDPAYGARPLRRLVQTQVGDQLA 836
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRTDPS 880
RML+ +I + STV +D + GD L V + A D I+I NGP DP+
Sbjct: 837 RMLLAGKIKDGSTVLVDHT-GGDQLELSVHDSDPL--AGDTNPEDTSIEINNGPHNDPT 892
>gi|239832943|ref|ZP_04681272.1| ATP-dependent chaperone ClpB [Ochrobactrum intermedium LMG 3301]
gi|239825210|gb|EEQ96778.1| ATP-dependent chaperone ClpB [Ochrobactrum intermedium LMG 3301]
Length = 913
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/864 (52%), Positives = 605/864 (70%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ + D G+ + I AGG A
Sbjct: 41 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHVLKVFVDDDEGLASSLIERAGGRIA-- 98
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 99 DVRIGLQTALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 158
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ ++ ++ AGV + + +R +GR +SAS ++ F ALK Y RDL E A G
Sbjct: 159 KSAKTSEILSAAGVTPTALNKVINDMR--KGRTADSASAESNFDALKKYARDLTEDARSG 216
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 217 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 276
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+++G+MDA
Sbjct: 277 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKSDGAMDA 336
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 337 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 396
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 397 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 456
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK R + KEL DL ++ L +++ EK+++ L
Sbjct: 457 DRRIMQLKIEREALKVETDAASKDRFQRLEKELTDLEEESAELTSKWQSEKQKLGLAADL 516
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + + E +Q ++ +L ETV PD
Sbjct: 517 KRQLEEARNALAIAQRSGEFQKAGELAYGTIPQLEKQLVEAE-SQENKGSLLEETVTPDH 575
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+++SRWTGIPV R+ + E+E+L +G EAV A++++V R+RAGL P
Sbjct: 576 VAQIISRWTGIPVDRMLEGEREKLLRMEDELAKRVVGQGEAVQAISKAVRRARAGLQDPN 635
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 636 RPIGSFIFLGPTGVGKTELTKALAAFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 695
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 696 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 755
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + K ++ R++V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 756 MTSNLGAEYLVN-LGEKDDVESVREEVMGVVRAAFRPEFLNRVDEIILFHRLRREDMGAI 814
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + + L +R + L + + A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 815 VDIQMQRLQMLLNDRKIVLQLEEDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 874
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 875 LGDILDGSIVKITAG--SDRLNFR 896
>gi|449015649|dbj|BAM79051.1| heat shock protein 101 [Cyanidioschyzon merolae strain 10D]
Length = 739
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/729 (60%), Positives = 560/729 (76%), Gaps = 39/729 (5%)
Query: 164 LKTYGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLA 221
LK YGRDLV +A G+LDPVIGRD E+RRV++ILSRRTKNNPVLIGEPGVGKTA+VE LA
Sbjct: 13 LKVYGRDLVAEAEAGRLDPVIGRDAELRRVIQILSRRTKNNPVLIGEPGVGKTAIVEALA 72
Query: 222 QRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEI 281
QRIVRGDVP L+ R++ALDM AL+AGAKYRGEFEERLK ++K V+E+ GK+ILFIDEI
Sbjct: 73 QRIVRGDVPEALSGTRVVALDMAALIAGAKYRGEFEERLKGIIKAVKESAGKIILFIDEI 132
Query: 282 HLVLGAGRTEG-SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVA 340
H VLGAG T G SMDAAN+ KP LARG+LRCIGATT++EY+K+VEKDAAFERRFQQVYV+
Sbjct: 133 HTVLGAGSTSGESMDAANILKPALARGELRCIGATTVDEYKKHVEKDAAFERRFQQVYVS 192
Query: 341 EPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACA 400
EPSV +T+SILRGL+ YE HGVR+ D +L+ AAQLS RYI R LPDKAIDL+DEAC+
Sbjct: 193 EPSVEETISILRGLRPVYESFHGVRVTDASLIAAAQLSDRYIRDRFLPDKAIDLLDEACS 252
Query: 401 NVRVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLM 460
+RVQLDSQPE ID LER+++QLEIE AL++EKDKASK RL VR+E+ + ++L+PL
Sbjct: 253 AIRVQLDSQPEIIDRLERRKLQLEIEETALQREKDKASKQRLESVREEIAKIDEELRPLK 312
Query: 461 MRYKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQ---- 516
+++KE ++++E+R ++ K EEL + AERR DLA A+DLR+GAI E+++ + Q
Sbjct: 313 KKFEKEMQKVNEVRHIRSKIEELKRKAELAERRRDLALASDLRFGAIPELQSRLSQLTRE 372
Query: 517 ---------------LEGNQSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL- 560
L G +++ ++++ETV P IAEVVSRWTGIPV+RL Q E+ERL
Sbjct: 373 IDEERSQRALHASSRLSGTEAESAVLVSETVEPAHIAEVVSRWTGIPVSRLTQGERERLL 432
Query: 561 ----------IGLAEAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAE 610
+G A+A++A+A+++LRSRAG GR QQP GSFLFLGPTGVGKTE AKALA
Sbjct: 433 HLRERLMSRIVGQAQAISAIADAILRSRAGFGREQQPIGSFLFLGPTGVGKTETAKALAV 492
Query: 611 QLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVE 670
+LFD E +VRIDMSEYME+H+V+RLIG+PPGYVG+EEGGQLTEA+RRRPYSVVL DEVE
Sbjct: 493 ELFDTEKNIVRIDMSEYMEKHAVARLIGSPPGYVGYEEGGQLTEAIRRRPYSVVLLDEVE 552
Query: 671 KAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARD 730
KAH V N LLQVLDDGRLTDG G+ VDF N VIIMTSN+G++++L + G + + A
Sbjct: 553 KAHPEVLNILLQVLDDGRLTDGHGKVVDFSNCVIIMTSNIGSKYILD-LNG--SAKDAEP 609
Query: 731 QVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAA 790
V++EVR+ FRPE LNRLD IV+++ L QL + RLQ+ DV RLA + L TDAA
Sbjct: 610 FVMEEVRRTFRPEFLNRLDAIVLYNALGEVQLAAIVRLQLADVGKRLAREQIMLQCTDAA 669
Query: 791 LDIVLAES-YDPIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
+ +L E+ +P YGARPIRR++E+++VTELSRM + E+ V +D +GD ++R
Sbjct: 670 VIRILNEAKANPAYGARPIRRFIEQELVTELSRMHISGELLSGGRVIVDVDQRGD-WIFR 728
Query: 850 VQKNGGFVD 858
V+ N +D
Sbjct: 729 VE-NPSLMD 736
>gi|448236977|ref|YP_007401035.1| chaperonin [Geobacillus sp. GHH01]
gi|445205819|gb|AGE21284.1| chaperonin [Geobacillus sp. GHH01]
Length = 864
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/854 (53%), Positives = 609/854 (71%), Gaps = 21/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ + T K EA+ A LA H Q HL +ALL G+ + G + A
Sbjct: 1 MDASRLTEKLQEALMAAQSLAKERHHQQLDVEHLLIALLEQEGGLAPRLFALCGADRA-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
A R +++ P A ++ + L +++ A+ K D +++V+ ++L L
Sbjct: 59 QAIRWLQDRLRQKPEVHGADGQLYVAPALARLLEEAENEAKRMQDEYISVEHVLLALSHG 118
Query: 121 SQ-IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
++ + G+ + V K+RG + +V S + T++AL YGRDLV +A GK
Sbjct: 119 AEPVARQLASFGLTEEALVEAVRKVRGNQ--RVTSPHPEATYEALAKYGRDLVAEAKAGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DPVIGRD EIRR++RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L D
Sbjct: 177 IDPVIGRDSEIRRIIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLKDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+ ALDM ALVAGAK+RGEFEERLKAVL E+++++G++ILFIDE+H ++GAGR EG++DA
Sbjct: 237 IFALDMSALVAGAKFRGEFEERLKAVLNEIKKSDGRIILFIDELHTIVGAGRAEGAIDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPMLARG+LRCIGATTL+EYR+Y+EKD A ERRFQQV V EPSV DT+SILRGLKE+
Sbjct: 297 NMLKPMLARGELRCIGATTLDEYRQYIEKDPALERRFQQVLVQEPSVEDTISILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGV+I DRALV AA LS RYI+ R LPDKAIDLVDEACA +R +++S P E+D +
Sbjct: 357 YEVHHGVKIHDRALVAAAVLSDRYISDRFLPDKAIDLVDEACATIRTEMESMPSELDEVM 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ MQLEIE AL KE D+AS+ RL ++KEL DLR+K + +++KEKE +D +RRL+
Sbjct: 417 RRVMQLEIEEAALSKETDEASRERLAALQKELADLREKANAMKAQWQKEKEALDRVRRLR 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD--ENLMLTETVGPD 535
+ E L+EAE YDL +AA+LR+G I ++E + QLE S+ E +L E V +
Sbjct: 477 EALERAKRELEEAENEYDLNKAAELRHGRIPQLEKQLKQLEQEISEQSEGKLLREEVTEE 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKER-----------LIGLAEAVNAVAESVLRSRAGLGRP 584
+IAE+VSRWTGIP+TRL + E+E+ +IG EAV VA++VLR+RAG+ P
Sbjct: 537 EIAEIVSRWTGIPLTRLVEGEREKLLRLHELLHRRVIGQDEAVELVADAVLRARAGMKDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALAE LFD E L+R+DMSEYME+H+VSRLIGAPPGYV
Sbjct: 597 NRPIGSFLFLGPTGVGKTELAKALAEALFDSEEQLIRLDMSEYMEKHAVSRLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGRLTD QGRTVDF+NTV+
Sbjct: 657 GYEEGGQLTEAVRRKPYSVLLFDEIEKAHPDVFNILLQLLDDGRLTDSQGRTVDFKNTVV 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSN+G+ LL G + + R QV ++R HFRPE LNR+D+IV+F PLS +++
Sbjct: 717 IMTSNIGSPLLLENKQGDIDEET-RKQVFDQLRAHFRPEFLNRIDDIVLFKPLSMNEVKG 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ ++++ RLA+R + L +T+AA + +DP+YGARP++R+++K++ T L++ L
Sbjct: 776 IVEKFARELSARLADRHIELVLTEAAKQYIAEAGFDPVYGARPLKRFMQKQIETPLAKEL 835
Query: 825 VREEIDENSTVYID 838
+ + + STV +D
Sbjct: 836 IAGRVKDYSTVTVD 849
>gi|344996166|ref|YP_004798509.1| AAA ATPase [Caldicellulosiruptor lactoaceticus 6A]
gi|343964385|gb|AEM73532.1| LOW QUALITY PROTEIN: AAA ATPase central domain protein
[Caldicellulosiruptor lactoaceticus 6A]
Length = 864
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/860 (50%), Positives = 617/860 (71%), Gaps = 28/860 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN ++FT A+ A A H + P HL AL+++ + A+ + N G A +
Sbjct: 1 MNMERFTQSLQTALLDAQNTAIVYKHQEIGPEHLHYALVNEDDKLVAKILKNMG--IATE 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+R + +KK+P P + S + +++ +A+ + D +++V+ + L ++
Sbjct: 59 LYKRDIEEQLKKIPMVYGPGASTVYVSRYVNEILIKAEEEARKFKDEYISVEHVYLAMI- 117
Query: 120 DSQI---GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
DS I +F++ G+ + ++ K+RG + ++ + + + ++ LK YGRDL E A
Sbjct: 118 DSDIPSSKSIFRKYGITREKFLQQLYKIRGNQ--RITNPNPEEVYEVLKKYGRDLTELAR 175
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L
Sbjct: 176 KGKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + ALD+G+L+AGAKYRGEFEERLKAVL E+ +EG++ILFIDEIH ++GAGR EG+M
Sbjct: 236 DKTIFALDLGSLIAGAKYRGEFEERLKAVLNEIIASEGRIILFIDEIHNIVGAGRAEGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT++EYRKY+EKDAA ERRFQ V V PSV DT+SILRGL
Sbjct: 296 DAGNLLKPMLARGELHCIGATTIDEYRKYIEKDAALERRFQPVLVNPPSVEDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGVRI D AL+ AA+LS RYI+ R LPDKAIDL+DEA A +R ++DS P E+D
Sbjct: 356 KERFEIHHGVRITDDALIAAAKLSDRYISDRFLPDKAIDLIDEAAALLRTEIDSMPTELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQL IE + L+KE++ ++K R+ E+ KE+ L+ + L +++ EKE I E+R
Sbjct: 416 EITRKIMQLRIEKNVLQKEENPSAKQRIEEIEKEIAQLQSRADELSAQWEYEKELIKEVR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLMLTE 530
R+K++ E + ++EAER YDL R ++L+YG + E++ A+ +LE E +L E
Sbjct: 476 RIKEEIENVKIQIEEAERNYDLNRLSELKYGKLIELQKALDRKRQELE-KIPPEKRLLKE 534
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRA 579
V ++IA++VS+WTGIPV +L + E++ R++G EA+ AV +++R+RA
Sbjct: 535 EVTEEEIAKIVSKWTGIPVAKLVETERQKILELDKILHRRVVGQDEAIEAVCNAIMRARA 594
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P G+FLFLGPTGVGKTELA+ALAE LFD EN ++RIDM+EYME+HSVSRLIGA
Sbjct: 595 GIKDPRKPIGTFLFLGPTGVGKTELARALAEALFDSENNMIRIDMTEYMEKHSVSRLIGA 654
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVR +PYSVVLFDE+EKAH VFN LLQ++DDGRLTD +GRTVDF
Sbjct: 655 PPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHRDVFNILLQIMDDGRLTDSKGRTVDF 714
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NT+IIMTSNLG+E+LL+ + + + R + +E++ HFRPE LNRLDEI++F PL+
Sbjct: 715 KNTIIIMTSNLGSEYLLNAKISNGEIGEETRKLIDRELKLHFRPEFLNRLDEIIIFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
EQ+ K+ L++ ++ +L E+G+++ +T A + V+ ++D +GARPI+R+L+K V T
Sbjct: 775 KEQIIKIIDLRVAEIQQKLIEKGISIRLTQRAKEFVMENAFDVNFGARPIKRFLQKNVET 834
Query: 819 ELSRMLVREEIDENSTVYID 838
++R +++ I E ++ ID
Sbjct: 835 LIAREILKGTIVEGDSIDID 854
>gi|313114809|ref|ZP_07800309.1| ATP-dependent chaperone protein ClpB [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622864|gb|EFQ06319.1| ATP-dependent chaperone protein ClpB [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 870
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/866 (51%), Positives = 617/866 (71%), Gaps = 31/866 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQ---AINNAGGEN 57
MN +++T KT EA+ A +LA H Q P HL AL S G+ Q +N G
Sbjct: 1 MNTNQYTQKTLEALQAAQQLAVEYQHNQLEPEHLLHALASQEQGLIPQLLQKLNVDPGSF 60
Query: 58 AAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+A AE++ A+ ++ PD++ S KV+ A KA D +++V+ + LGL
Sbjct: 61 SAAVAEKL--SALPRVSGSGRDPDKVYISQAADKVLSAAAREAKAMKDDYISVEHVFLGL 118
Query: 118 LEDS--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L++ +LF+ + + ++ +RG + +V + + + T+ AL+ YG+DLV+ A
Sbjct: 119 LDEQTQNTTELFRAFSITKDKFLQQLTAVRGNQ--RVTNDNPEETYNALQKYGQDLVDLA 176
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD+EIR V+RILSR+TKNNP LIGEPGVGKTA+ EGLAQRIVRGDVP NL
Sbjct: 177 RKQKLDPVIGRDQEIRNVIRILSRKTKNNPCLIGEPGVGKTAIAEGLAQRIVRGDVPENL 236
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + +LDMGALVAGAKYRGEFEERLK+VL EV+++EGK+ILFIDE+H ++GAG+T+G+
Sbjct: 237 KDRIVFSLDMGALVAGAKYRGEFEERLKSVLNEVKKSEGKIILFIDELHTIVGAGKTDGA 296
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQ V V EP+V DT+SILRG
Sbjct: 297 MDAGNLLKPMLARGELHCIGATTLDEYRQYIEKDPALERRFQPVQVDEPTVEDTISILRG 356
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HGV+I D AL+ AA LS RYIT R LPDKAIDLVDEACA ++ ++DS P E+
Sbjct: 357 LKERYEVFHGVKINDSALIAAATLSDRYITDRFLPDKAIDLVDEACAMIKTEMDSMPSEM 416
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D+L + QL+IE +L+KE D S++RL ++ KEL +L+DK + + +++ EK I ++
Sbjct: 417 DDLAHRITQLQIEQVSLKKETDALSQSRLKDLEKELAELQDKFRSMKAKWENEKNAIGKV 476
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLMLTET 531
+ L+++ E+ +++A+R YDL +AA+L+YG + +++ + + E E+ +L +
Sbjct: 477 QSLREQIEQTNADIEKAQREYDLNKAAELKYGKLPQLQKQLEEEEKIAAAKKEDSLLRDR 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IA +V+RWTGIPV +L + E+E+L IG EAV V+E++LRSRAG
Sbjct: 537 VTDEEIARIVARWTGIPVEKLVEGEREKLLHLDDVLHQRVIGQDEAVTKVSEAILRSRAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P +P GSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDM+EYME+ SVSRLIGAP
Sbjct: 597 IANPNRPIGSFLFLGPTGVGKTELAKALAQALFDDERNMVRIDMTEYMEKFSVSRLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+
Sbjct: 657 PGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVT------MQVARDQVLQEVRKHFRPELLNRLDEIVVF 754
NTVII+TSNLG++ +L+ + + + A+ Q+ Q ++ FRPE LNRLDEIV +
Sbjct: 717 NTVIILTSNLGSDIILNDLEQRRANGSNELSEEAKHQIDQLLKSKFRPEFLNRLDEIVYY 776
Query: 755 DPLSHEQLRKVARLQMKDVAIRLAE-RGVALAVTDAALDIVLAESYDPIYGARPIRRWLE 813
L+ +++R++ LQ++D+ R+ E + + L VT AA D ++ +YD +YGARPI+R+++
Sbjct: 777 KSLTKDEMRRIVDLQLQDLRKRMDEGKHLKLEVTTAAKDFIIDSAYDSVYGARPIKRFIQ 836
Query: 814 KKVVTELSRMLVREEIDENSTVYIDA 839
+V T +++ +++ E +T+ +D
Sbjct: 837 SRVETLIAKAIIQGSYTEGNTLTVDC 862
>gi|300025033|ref|YP_003757644.1| ATP-dependent chaperone ClpB [Hyphomicrobium denitrificans ATCC
51888]
gi|299526854|gb|ADJ25323.1| ATP-dependent chaperone ClpB [Hyphomicrobium denitrificans ATCC
51888]
Length = 864
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/855 (52%), Positives = 601/855 (70%), Gaps = 27/855 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +++T + I A LA H Q TP HL LL DP G+ + I AGG+ ++
Sbjct: 1 MNFERYTDRAKGFIQSAQSLALRENHQQVTPDHLLKILLDDPEGLASGLIQRAGGD--SR 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEI---PASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+A R A+ K P T + P S L + + A KA D + ++L+L L
Sbjct: 59 AALRSVEAALAKKPKVTGGSGGVYVSPESARLFDAVEKL--ADKAS-DKFVTAERLLLAL 115
Query: 118 LED--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
D + G ++AGV ++ + + +LR +GR +SA+ + + ALK Y RDL E A
Sbjct: 116 ALDPSTDAGKALRDAGVTADKLNTAINELR--KGRTADSANAEQAYDALKRYARDLTEAA 173
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RI++GDVP +L
Sbjct: 174 ATGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIIKGDVPESL 233
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+L++LDMGAL+AGAKYRGEFEERLKAVL EVE G +ILFIDE+H ++GAG+TEGS
Sbjct: 234 KHKKLLSLDMGALIAGAKYRGEFEERLKAVLSEVEAEGGNIILFIDELHTIVGAGKTEGS 293
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KP LARG+L C+GATTL+EYRK +EKDAA RRFQ ++V+EP+V DT+SILRG
Sbjct: 294 MDAGNLLKPALARGELHCVGATTLDEYRKNIEKDAALARRFQPIFVSEPTVEDTISILRG 353
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKEKYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+
Sbjct: 354 LKEKYELHHGVRITDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEEL 413
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D ++R MQ+ IE AL+KE D ASK RL + K + DL +K + + R++ EK+++
Sbjct: 414 DAIDRDLMQMMIEREALKKETDAASKDRLARLEKSIADLEEKSKAMTARWESEKQKLGSA 473
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVG 533
+++K++ + L AL++A+RR DLARA +LRYG I E+E + +E +Q + M+ E V
Sbjct: 474 QKIKEELDNLRNALEQAQRRGDLARAGELRYGKIPELEKQLSTIE-SQEGKGAMVEEAVT 532
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
PDQIA VVSRWTG+PV ++ + E+++L IG EAV AV+ +V R+RAGL
Sbjct: 533 PDQIAAVVSRWTGVPVDKMLEGERDKLLKMEDALSKRVIGQKEAVVAVSTAVRRARAGLQ 592
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTEL KALA LFDD+ L+RIDMSEYME+HSV+RLIGAPPG
Sbjct: 593 DPNRPIGSFMFLGPTGVGKTELTKALAGYLFDDDTALIRIDMSEYMEKHSVARLIGAPPG 652
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY +VLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT
Sbjct: 653 YVGYEEGGALTEAVRRRPYQIVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNT 712
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+I++TSN+GAE+L++ G+ T + R++V+ EVR FRPE LNRLD+I++F L ++
Sbjct: 713 LIVLTSNIGAEYLVNQKEGEDT-EAVREEVMAEVRTKFRPEFLNRLDDIILFHRLQRNEM 771
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
K+ +Q+ + L +R + + V + A + YDP YGARP++R +++ V L+
Sbjct: 772 TKIVDIQIARLQKLLVDRKIKIEVDEQAKTWLANRGYDPAYGARPLKRVIQRHVQDPLAE 831
Query: 823 MLVREEIDENSTVYI 837
++ + + TV +
Sbjct: 832 QILAGGVKDGDTVVV 846
>gi|84514618|ref|ZP_01001982.1| Chaperone ClpB [Loktanella vestfoldensis SKA53]
gi|84511669|gb|EAQ08122.1| Chaperone ClpB [Loktanella vestfoldensis SKA53]
Length = 882
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/857 (52%), Positives = 601/857 (70%), Gaps = 22/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DKFT ++ I A +A H + TP HL ALL D G+ A I AGG A
Sbjct: 13 MNLDKFTERSRGFIQSAQTIAMRENHQRLTPEHLLKALLDDEEGLAANLITRAGGRPA-- 70
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-LE 119
N + KLP T ++ V+ A+ K GD+ + V++L+ L L
Sbjct: 71 DVLGAVNATLAKLPKVTGDAAQVYLDNITATVVDEAEKIAKKAGDSFVPVERLLTALALV 130
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
S+ D GV + + + +R +GR +SAS + +F ALK Y RDL E A GK
Sbjct: 131 KSKAKDALDAGGVTAQALNAAINDMR--KGRTADSASAEDSFDALKKYARDLTEAAEQGK 188
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DP+IGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L +
Sbjct: 189 IDPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLRHKK 248
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ALDMGAL+AGAKYRGEFEERLKAVLKE+E A G++ILFIDE+H ++GAG+ +G+MDAA
Sbjct: 249 LMALDMGALIAGAKYRGEFEERLKAVLKEIETAAGEIILFIDEMHTLVGAGKADGAMDAA 308
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L CIGATTL EYRKYVEKDAA RRFQ + V EP+V DT+SILRG+KEK
Sbjct: 309 NLIKPALARGELHCIGATTLAEYRKYVEKDAALARRFQPLLVEEPTVVDTISILRGIKEK 368
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+++DS+PEE+D L+
Sbjct: 369 YELHHGVRISDSALVAAATLSHRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEELDALD 428
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL+IE AL+KE DKASK RL ++ KEL D++D+ + +++ E++++++ R +K
Sbjct: 429 RQILQLQIEAEALKKEDDKASKDRLEKLEKELADVQDRASEMTAKWQTERDKLEDTRGVK 488
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
++ + L A+R +LA+A +L YG I ++E + ++E N ++LM+ E V P+QI
Sbjct: 489 ERLDRARADLDIAKREGNLAKAGELSYGVIPQLERQLAEVEAN---DDLMVEEAVRPEQI 545
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEVV RWTGIP++++ + E+++L IG AV AVA +V R+RAGL +
Sbjct: 546 AEVVERWTGIPMSKMLEGERDKLLRMEDALGKRVIGQKTAVRAVANAVRRARAGLNDENR 605
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KA+AE LFDD++ +VRIDMSE+ME+H+VSRLIGAPPGYVG+
Sbjct: 606 PLGSFLFLGPTGVGKTELTKAVAEYLFDDDSAMVRIDMSEFMEKHAVSRLIGAPPGYVGY 665
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
+EGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDG LTDGQGR VDF+ T+II+
Sbjct: 666 DEGGVLTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRHVDFKQTLIIL 725
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLGA+ LS + V A+ V+ VR HFRPE LNRLDE ++FD L+ + + +
Sbjct: 726 TSNLGAQA-LSQLPDGVDSGAAKRDVMDAVRAHFRPEFLNRLDETIIFDRLARDDMAGIV 784
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q+ +A RLA R ++L + D AL + E YDP++GARP++R +++ + +L+ M++
Sbjct: 785 AIQLGLLAKRLAGRNISLDLDDGALRWLADEGYDPVFGARPLKRVIQRTLQDQLAEMILG 844
Query: 827 EEIDENSTVYIDASPKG 843
++ E + + + A G
Sbjct: 845 GDVLEGAVIKVTAGVDG 861
>gi|407976878|ref|ZP_11157774.1| ATP-dependent chaperone ClpB [Nitratireductor indicus C115]
gi|407427777|gb|EKF40465.1| ATP-dependent chaperone ClpB [Nitratireductor indicus C115]
Length = 872
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/869 (52%), Positives = 603/869 (69%), Gaps = 23/869 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ + I A +A S H QF P HL L+ D G+ A I AGG AQ
Sbjct: 1 MNIEKYSERVRGFIQSAQTMALSRNHQQFAPEHLLKVLVDDEEGLAASLIERAGGR--AQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
+ A+K +P ++ + L KV A+ K GD+ + V++L+ L +
Sbjct: 59 DVRLAVDAALKAMPQVEGGNGQLYMAQPLAKVFAIAEELAKKAGDSFVTVERLLTALAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ D+ +AGV + + +R +GR +SAS + + ALK Y RDL +AG
Sbjct: 119 KSAKTADILAKAGVTATGLNQVINDIR--KGRTADSASAEQGYDALKKYARDLTADARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV A G +ILFIDE+H ++GAG+++G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVTAASGNIILFIDEMHTLVGAGKSDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKYVEKDAALARRFQPVFVNEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYI R LPDKAIDLVDEA + +R+Q+DS+PE +D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYIADRFLPDKAIDLVDEAASRLRMQVDSKPEALDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ EKD AS+ RL ++ KEL L ++ L R+ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKAEKDDASRDRLTKLEKELSGLEEESARLTSRWAAEKDKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD-ENLMLTETVGPD 535
K + +E L A+RR + RA +L YG I E+E + + E D + M+ ETV PD
Sbjct: 477 KGQLDEARNELAIAQRRGEFQRAGELAYGRIPELEKKLAEAEAQGDDGKGGMVEETVTPD 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
+A VVSRWTGIPV ++ + E+E+L +G EAV AV+++V R+RAGL P
Sbjct: 537 HVAHVVSRWTGIPVDKMLEGEREKLLRMEDEIAKRVVGQGEAVQAVSKAVRRARAGLQDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALA LFDDE +VRIDMSE+ME+HSV+RLIGAPPGYV
Sbjct: 597 NRPIGSFMFLGPTGVGKTELTKALANFLFDDEQAMVRIDMSEFMEKHSVARLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGG LTEA+RRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 657 GYEEGGVLTEAIRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
+MTSNLGAE+L++ + + RD+V+ VR FRPE LNR+DE+++F L + + +
Sbjct: 717 VMTSNLGAEYLVN-LGEDEDVDKVRDEVMGVVRNAFRPEFLNRIDEVILFHRLRRQDMGQ 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q++ + L +R ++L++ D A++ + + YDP YGARP++R ++K++ L+ +
Sbjct: 776 IVHIQLERLGRLLTDRKISLSLDDDAIEWLANKGYDPAYGARPLKRVMQKELQDPLAEKI 835
Query: 825 VREEIDENSTVYIDASPKGDNLVYRVQKN 853
+ EI +NSTV + A D L +R Q+
Sbjct: 836 LSGEIFDNSTVKVTAG--SDRLNFRPQRT 862
>gi|304438821|ref|ZP_07398747.1| chaperone protein ClpB [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372704|gb|EFM26284.1| chaperone protein ClpB [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 861
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/869 (51%), Positives = 611/869 (70%), Gaps = 25/869 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T K+ EAI +A G+ + T HL +LL D +G+ + ++ G +
Sbjct: 1 MNLEKWTQKSIEAIQNTENIAREYGNPEITDKHLLASLLMDKNGLIPRVLSYMGVN--SD 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
R +++LP I ST IR A + D + +V+ + L +L++
Sbjct: 59 DLLRETKAEIERLPKMRGGS--IHPSTDFSVAIRDADKIRDEFKDLYTSVEHIFLAILQN 116
Query: 121 SQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+G+L K+ + + K+RG + V + + + TF+AL YGRDL +A G
Sbjct: 117 KNGTVGELLKKFNITKETFLENLRKIRGNQ--HVTTDNPEDTFEALLKYGRDLTAEAKSG 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DPVIG++EEIR V+RILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L D
Sbjct: 175 KMDPVIGKEEEIRNVIRILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSGDVPEGLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMG+L+AGAKYRGEFEERLKAVL EV +EGK+ILFIDEIH ++GAG+T+G+MDA
Sbjct: 235 TIFSLDMGSLIAGAKYRGEFEERLKAVLNEVSSSEGKIILFIDEIHNIVGAGKTDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KPMLARG+L IGATTL+EYRKY+EKD+A ERRFQ+V V EP+V +T++ILRGLK
Sbjct: 295 GNLLKPMLARGELHTIGATTLDEYRKYIEKDSALERRFQKVMVTEPTVEETITILRGLKH 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
K+E +HG+RI D A++ AA LS RYI+ R LPDKAIDL+DE+CA +R ++DS P EID++
Sbjct: 355 KFEIYHGIRISDGAVIAAATLSNRYISDRFLPDKAIDLMDESCAMLRTEIDSMPTEIDDV 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
R + LEIE AL+KE D+AS RL + KE+ + + L ++++EK+ +D ++ +
Sbjct: 415 RRAILSLEIEREALKKETDEASAKRLASIEKEISEKKSDYDLLKAKWEQEKKDLDSVKEI 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K+K E++ ++EAER YDL + + L+YG + ++E + E DE+ M+ E V ++
Sbjct: 475 KEKIEDIKHQIEEAERSYDLEKLSVLKYGELPKLEEELKTKEEKTKDEDQMVKEVVTEEE 534
Query: 537 IAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRPQ 585
I EVVSR TGIP+ RL + E+ ER+IG EAV AV+++VLR+RAGL
Sbjct: 535 IREVVSRLTGIPLERLNETERDKLLKLDERLHERVIGQDEAVKAVSDAVLRARAGLKSEN 594
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTE AKAL E LFDDE L+RIDMSEYME++SVSRLIG+PPGYVG
Sbjct: 595 RPIGSFIFLGPTGVGKTETAKALTEDLFDDEKNLIRIDMSEYMEKYSVSRLIGSPPGYVG 654
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGGQLTEAVRR PYSV+LFDE+EKAH VFN LLQVLDDGRLTD QGRTVDF+NTVII
Sbjct: 655 YEEGGQLTEAVRRHPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDNQGRTVDFKNTVII 714
Query: 706 MTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
MTSNLG+ LL G+ GK+ + +D V++E+++ FRPE LNR+DEIV+F PL+ +Q+
Sbjct: 715 MTSNLGSADLLEGIDADGKIP-EATKDIVMEELKRSFRPEFLNRIDEIVMFTPLTRDQIF 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ + +K++ RL R + + T++AL +L ESY+ YGARP++R+++ + T+LSRM
Sbjct: 774 EIIKQAIKELEKRLEAREITIEATESALQKILDESYNVQYGARPVKRYIQSTLETKLSRM 833
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRVQK 852
++ E+ E + +D KG+ +V RV K
Sbjct: 834 IIAGEVGEKDKLVVDTDDKGE-IVIRVNK 861
>gi|257057792|ref|YP_003135624.1| ATP-dependent chaperone ClpB [Saccharomonospora viridis DSM 43017]
gi|256587664|gb|ACU98797.1| ATP-dependent chaperone ClpB [Saccharomonospora viridis DSM 43017]
Length = 873
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/870 (54%), Positives = 611/870 (70%), Gaps = 36/870 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT +AI+ A + AT AG+ + +P HL ALLS G+ A + AG + A
Sbjct: 4 FNP---TTKTQQAISSAAQAATMAGNPEISPAHLLGALLSQSDGLAAPLLTAAGADPGAV 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
E + LPS T A P T +K + AQ GD +++ + +++GL
Sbjct: 61 RKE--LESVISTLPSATGATVSSPQFDTYAVKSLTHAQKLATEMGDEYVSTEHVLVGLAA 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
E + DL K G ++ K+RG +V + + T+QAL+ YG DL E+A G
Sbjct: 119 EGGPVADLLKRQGATPETLRDAFTKVRGSA--RVTTPDPEGTYQALEKYGVDLTERARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
+LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L
Sbjct: 177 ELDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT---EGS 293
R++ALD+G++VAGAKYRGEFEERLKAVLKE++E++G+V+ FIDE+H ++GAG T + S
Sbjct: 237 RVVALDVGSMVAGAKYRGEFEERLKAVLKEIKESDGQVVTFIDELHTIVGAGATGSGDSS 296
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
+DA N+ KPMLARG+LR +GATTL+EYR+++EKDAA ERRFQQV+V EPSV DTV ILRG
Sbjct: 297 LDAGNMIKPMLARGELRMVGATTLDEYREHIEKDAALERRFQQVFVGEPSVEDTVGILRG 356
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+P EI
Sbjct: 357 LKERYEVHHGVRITDAALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEI 416
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D +ER ++EIE AL KE D ASK RL +R EL + R+KL LM R++ EK I+ +
Sbjct: 417 DEVERAVRRMEIEEMALSKEDDPASKERLEALRAELAERREKLNALMARWQNEKSAIERV 476
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENL--- 526
R LK++ E+L + AER DL RAA+LRYG I +E+E AI E + S EN+
Sbjct: 477 RGLKEQLEQLRGEAERAERDADLGRAAELRYGRIPALEKELEKAIRDTESDPSGENMADV 536
Query: 527 MLTETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVL 575
ML E VG D +A+VVS WTGIP RL + E +R++G ++AV V+++V
Sbjct: 537 MLKEEVGADDVADVVSAWTGIPAGRLLEGETGKLLRMEEELGKRVVGQSDAVKVVSDAVR 596
Query: 576 RSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSR 635
R+RAG+ P +PTGSFLFLGPTGVGKTELAKALAE LFDDE ++RIDMSEY E+HSV+R
Sbjct: 597 RARAGVADPDRPTGSFLFLGPTGVGKTELAKALAEFLFDDERAMLRIDMSEYSEKHSVAR 656
Query: 636 LIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGR 695
L+GAPPGYVG+++GGQLTE+VRRRPYSVVL DEVEKAH VF+ LLQVLDDGRLTDGQGR
Sbjct: 657 LVGAPPGYVGYDQGGQLTESVRRRPYSVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGR 716
Query: 696 TVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFD 755
TVDFRNT++++TSNLG++ + + + Q +D V+ V++HF+PE LNRLD+IVVF
Sbjct: 717 TVDFRNTILVLTSNLGSQVIADPTLSE---QQRKDSVMSVVQQHFKPEFLNRLDDIVVFH 773
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
L E L + +Q+ +A RLA+R + L VT AA + + YDPIYGARP+RR ++
Sbjct: 774 ALDTEHLGAIVDIQVGRLAKRLAQRRLTLDVTPAAREWLAMNGYDPIYGARPLRRLVQSA 833
Query: 816 VVTELSRMLVREEIDENSTVYIDASPKGDN 845
+ EL++ L+ EI + TV +D P+ D
Sbjct: 834 IGDELAKKLLAGEIKDGDTVRVDV-PESDT 862
>gi|298292690|ref|YP_003694629.1| ATP-dependent chaperone ClpB [Starkeya novella DSM 506]
gi|296929201|gb|ADH90010.1| ATP-dependent chaperone ClpB [Starkeya novella DSM 506]
Length = 872
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/834 (54%), Positives = 589/834 (70%), Gaps = 25/834 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN + +T + + A LA G+ QFTP HL LL DP G+ A I +GG+
Sbjct: 1 MNFEIYTERARGFVQSAQSLALREGNQQFTPEHLLKVLLDDPEGLCAGLIQRSGGDPRMV 60
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
A+ A+KKLP Q ++ + +V A+ A K GD ++ V++L+L L
Sbjct: 61 LADT--EAALKKLPKVQGSGAGQVYLAPATARVFDAAEQAAKKAGDGYVTVERLLLALAL 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+DS+ G + +A ++ + +E LR +GR +SA+ + + ALK Y RDL A
Sbjct: 119 EKDSEAGKILAKADATPQKINAAIEALR--KGRTADSATAENAYDALKKYARDLTSAARE 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVDGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
L+ALDMG+L+AGAKYRGEFEERLK+VL EVE AEG +ILFIDE+H ++GAG+T+G+MD
Sbjct: 237 KSLLALDMGSLIAGAKYRGEFEERLKSVLSEVEAAEGGIILFIDEMHTLVGAGKTDGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DT+SILRG+K
Sbjct: 297 ASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRGIK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D+
Sbjct: 357 EKYELHHGVRITDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L IE AL+KE D S+ RL + KEL DL ++ L R+K EKE++ + ++
Sbjct: 417 IDREIVRLRIEQEALKKESDAGSRDRLKRLEKELADLEEQSASLTSRWKAEKEKLGDAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE----GNQSDENLMLTET 531
+K E+ L A+R + +A +L YG I +E + +E + M+ E
Sbjct: 477 IKSDLEKARAELANAQRAGEYQKAGELAYGTIPALEKKLAAIETQELAAEVKAGAMVEEA 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
V PD +A+VVSRWTG+PV ++ + EKE R+IG EAV AV+ +V R+RAG
Sbjct: 537 VTPDHVAQVVSRWTGVPVDKMLEGEKEKLLRMEDVLSKRVIGQKEAVEAVSTAVRRARAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P GSF+FLGPTGVGKTEL KALA LFDD+ LVRIDMSEYME+H+V+RLIGAP
Sbjct: 597 LQDPNRPIGSFMFLGPTGVGKTELTKALASFLFDDDTALVRIDMSEYMEKHAVARLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFR
Sbjct: 657 PGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSNLG+E+L++ G+ T V RD+V+ VR HFRPE LNR+DEIV+F L E
Sbjct: 717 NTLIIMTSNLGSEYLVNQPDGEDTEAV-RDEVMGVVRAHFRPEFLNRVDEIVLFHRLRRE 775
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEK 814
Q+ + +Q K + L ER + L +T A D + + YDP YGARP++R ++K
Sbjct: 776 QMGAIVDIQAKRLDKLLEERKIRLEITSEARDFLAEKGYDPAYGARPLKRVMQK 829
>gi|423434767|ref|ZP_17411748.1| chaperone ClpB [Bacillus cereus BAG4X12-1]
gi|401126062|gb|EJQ33817.1| chaperone ClpB [Bacillus cereus BAG4X12-1]
Length = 866
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/874 (52%), Positives = 625/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A L S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLVVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEEIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKSIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|16801373|ref|NP_471641.1| hypothetical protein lin2309 [Listeria innocua Clip11262]
gi|54035882|sp|Q929G7.1|CLPB_LISIN RecName: Full=Chaperone protein ClpB
gi|16414821|emb|CAC97537.1| clpB [Listeria innocua Clip11262]
Length = 866
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/864 (51%), Positives = 622/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + +H+ LL++ FA+ + N +
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVIHVFKVLLTESD--FAKRAYDVAEVNV-E 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++V +++++K+P S + S L +++R A+ QK D ++ + LIL ++
Sbjct: 58 ALQKVVDESLRKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQKQLDDDFVSTEHLILAVM 117
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K+ + ++ + K+RG G+KV S + + ++AL YGRDLV +
Sbjct: 118 DQKSNPITVELKKQNKSKKQINEAILKIRG--GKKVTSQNAEENYEALTKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEMLQRELADYKEEANKMKSKWESEKSEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQ----SDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I VE + LE + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGKIPAVEKELLALETENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVQLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAYNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYVGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEITITISDNAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID K
Sbjct: 835 PLAREIVSGKIMPHSSVEIDLQDK 858
>gi|418055326|ref|ZP_12693381.1| ATP-dependent chaperone ClpB [Hyphomicrobium denitrificans 1NES1]
gi|353210908|gb|EHB76309.1| ATP-dependent chaperone ClpB [Hyphomicrobium denitrificans 1NES1]
Length = 864
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/852 (52%), Positives = 597/852 (70%), Gaps = 21/852 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +++T + I A LA H Q TP HL LL DP G+ + I AGG+ ++
Sbjct: 1 MNFERYTDRAKGFIQSAQALALRENHQQVTPDHLLKVLLDDPEGLASGLIQRAGGD--SR 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+A R A+ K P T + S ++ + D + ++L+L L D
Sbjct: 59 AALRNVEAALAKKPKVTGGSGGVYVSPESARLFDSVEKLADKASDKFVTAERLLLALALD 118
Query: 121 SQI--GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ G ++AGV ++ + + LR +GR +SA+ + + ALK Y RDL E A G
Sbjct: 119 TSTDTGKALRDAGVTADKLNAAINDLR--KGRTADSANAEQAYDALKRYARDLTEAAATG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RI++GDVP +L
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIIKGDVPESLKHK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L++LDMGAL+AGAKYRGEFEERLKAVL EVE G +ILFIDE+H ++GAG+TEGSMDA
Sbjct: 237 KLLSLDMGALIAGAKYRGEFEERLKAVLSEVEAEGGNIILFIDELHTIVGAGKTEGSMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KP LARG+L C+GATTL+EYRK +EKDAA RRFQ ++V+EP+V DT+SILRGLKE
Sbjct: 297 GNLLKPALARGELHCVGATTLDEYRKNIEKDAALARRFQPIFVSEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYELHHGVRITDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDAI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R MQ+ IE AL+KE D ASK RL + K + DL +K + + R++ EK+++ +++
Sbjct: 417 DRDLMQMMIEREALKKETDAASKDRLARLEKSIADLEEKSKAMTARWESEKQKLGSAQKI 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ + L AL++A+R+ DLARA +LRYG I E+E + +E +Q + M+ E V PDQ
Sbjct: 477 KEELDNLRNALEQAQRKGDLARAGELRYGKIPELEKKLASIE-SQEGKGAMVEEAVTPDQ 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
IA VVSRWTG+PV ++ + E++ R+IG EAV AV+ +V R+RAGL P
Sbjct: 536 IAAVVSRWTGVPVDKMLEGERDKLLKMEEALSKRVIGQKEAVIAVSTAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDD+ L+RIDMSEYME+HSV+RLIGAPPGYVG
Sbjct: 596 RPIGSFMFLGPTGVGKTELTKALAGYLFDDDTALIRIDMSEYMEKHSVARLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY +VLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+I+
Sbjct: 656 YEEGGALTEAVRRRPYQIVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTLIV 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
+TSN+GAE+L++ G+ T + R++V+ EVR FRPE LNRLD+I++F L ++ K+
Sbjct: 716 LTSNIGAEYLVNQKEGEDT-EAVREEVMTEVRSKFRPEFLNRLDDIILFHRLQRSEMTKI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+ + L +R + L + + A + YDP YGARP++R +++ V L+ ++
Sbjct: 775 VDIQISRLQKLLVDRKIKLELDENAKTWLANRGYDPAYGARPLKRVIQRHVQDPLAEQIL 834
Query: 826 REEIDENSTVYI 837
+ + TV++
Sbjct: 835 AGGVKDGDTVHV 846
>gi|425469785|ref|ZP_18848692.1| Chaperone [Microcystis aeruginosa PCC 9701]
gi|389880328|emb|CCI38899.1| Chaperone [Microcystis aeruginosa PCC 9701]
Length = 872
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/857 (51%), Positives = 613/857 (71%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP +FT K EAI ++A Q HL ALL A ++ + + A+
Sbjct: 5 NPQQFTEKAWEAIVKTPDIAKQNSQQQIESEHLMKALLEQEG--LAGSVFSKANISLARL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + +++ P + D I +L ++ RA+ ++ GD ++++ LILG +D
Sbjct: 63 RDRT-DDFIRRQPKISNPGDSIYLGRSLDSLLDRAENYRREFGDDFISIEHLILGYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G ++F+E G+ +++K ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGKNIFQEFGLTESKLKEIIQQVRGSQ--KVTDQNPEGKYEALEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLLDRTL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LD+G L+AGAKYRGEFEERLKAVLKEV +++G +I+FIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDLGGLIAGAKYRGEFEERLKAVLKEVTDSQGNIIMFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADNALVAAALLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L++E D AS+ RL ++ KEL +L+++ L +++ EKE ID++R +K+
Sbjct: 420 KILQLEMERLSLQREYDPASRERLEKLEKELANLKEEQSGLNAQWQGEKEIIDKVRGVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL----MLTETVGP 534
E++ +Q+AER YD RAA+L++G + +++ + LE +D+ +L E V
Sbjct: 480 AIEQVNLEIQQAERDYDYNRAAELKFGKLTDLQRQMSALETQLADKQTTGKSLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+ +L ++ E +IG EAV AVAE++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPLNKLIESEKEKLLNLEEELHESVIGQEEAVTAVAEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E LVRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHSVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDSQGHLVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + + +V++ +R FRPE LNR+DE ++F L QLR
Sbjct: 720 IIMTSNIGSQYILDVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDETIIFHSLQKAQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ +++ RL E+ +AL + D ALD + YDP+YGARP++R +++ V T +++
Sbjct: 780 SIVKLQTANLSDRLMEQKLALKLADIALDYLAEIGYDPVYGARPLKRAVQRYVETPIAKA 839
Query: 824 LVREEIDENSTVYIDAS 840
++R E T+++D +
Sbjct: 840 ILRGEFKGGDTIFVDVA 856
>gi|302875735|ref|YP_003844368.1| ATP-dependent chaperone ClpB [Clostridium cellulovorans 743B]
gi|307689166|ref|ZP_07631612.1| ATP-dependent chaperone ClpB [Clostridium cellulovorans 743B]
gi|302578592|gb|ADL52604.1| ATP-dependent chaperone ClpB [Clostridium cellulovorans 743B]
Length = 866
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/857 (51%), Positives = 596/857 (69%), Gaps = 21/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K EAI A A H Q +HL AL++ +G+ + A
Sbjct: 1 MDVEKLTLKVQEAINNAQGCAVRFNHQQIDAIHLFYALITQENGLVPNIFDKMNINMKAL 60
Query: 61 SAERVFN-QAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
E M K+ Q + A+ ++ ++ +K+ D++++V+ ++L LLE
Sbjct: 61 VDETTTELNRMPKVLGQGAQEARVYATRRFEEIFVKSDDIRKSFEDSYISVEHVMLALLE 120
Query: 120 DSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ IG +F + + ++ +RG + +VES + T++AL YGR+LV+ A
Sbjct: 121 NHSSDAIGKIFNKFNINKKSFMDNLKVVRGNQ--RVESNDPEGTYEALAKYGRNLVDAAR 178
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
KLDPVIGRDEEIRRV+RILSRRTKNNPVLIGEPGVGKTA++EGLAQRIVRGDVP L
Sbjct: 179 NHKLDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAIIEGLAQRIVRGDVPEGLK 238
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ +LDMGAL+AGAKYRGEFEERLKAVLKEVE +EGK+ILFIDEIH ++GAG+TEGSM
Sbjct: 239 GKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVERSEGKIILFIDEIHTIVGAGKTEGSM 298
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT +EYRKY+EKD A ERRFQ V EP+V DTVSILRGL
Sbjct: 299 DAGNLIKPMLARGELHCIGATTFDEYRKYIEKDKALERRFQPVIATEPTVEDTVSILRGL 358
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E H+G+RI D A+V AA+LS RYIT R LPDKAIDL+DEACA +R ++DS P E+D
Sbjct: 359 KERFEIHYGIRIHDSAIVAAAKLSDRYITERFLPDKAIDLIDEACAMIRTEIDSMPTELD 418
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L+RK QLEIE+ AL KE D ++ R ++KE+ +L+++ L +Y+KEK +I ++
Sbjct: 419 ILKRKIFQLEIEMEALSKESDSSAIQRYEALKKEVSELKEQDLELSAKYEKEKHKILSVK 478
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE--NLMLTETV 532
LK + +++ ++ AER YDL +AA L+YG + E E + + E E ML E V
Sbjct: 479 ELKSEIDDIKGEIERAEREYDLNKAAALKYGKLPETEQKLKEKEEALRKEYDTAMLKEEV 538
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGL 581
+I+E+V++WTGIPVTRL + E KER+IG EAV AV+ +VLR+RAGL
Sbjct: 539 TESEISEIVAKWTGIPVTRLIEGERQKLLRLEQELKERVIGQEEAVTAVSNAVLRARAGL 598
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
+P GSF+FLGPTGVGKT+LAK+LA+ LFD E ++RIDMSEYME++S SRLIGAPP
Sbjct: 599 KDMNRPIGSFIFLGPTGVGKTQLAKSLAKNLFDSEENIIRIDMSEYMEKYSTSRLIGAPP 658
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+ DDGRLTD +G TVDF+N
Sbjct: 659 GYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHEDVFNIFLQIFDDGRLTDNKGNTVDFKN 718
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+IIMTSN+G+ HLLS K + R+QV+ E++ F+PE LNR+D+ ++F PL+ ++
Sbjct: 719 TIIIMTSNIGSSHLLSNSSSKTVEEGVRNQVMAELKTRFKPEFLNRVDDTILFKPLTLDE 778
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + + + + RL ER + L +T A +++ E YDPIYGARP++R+L+ + TEL+
Sbjct: 779 IASIIDIFLDQIRFRLKERNITLKITSKAKELIAVEGYDPIYGARPLKRYLQNTIETELA 838
Query: 822 RMLVREEIDENSTVYID 838
R L++ +I + V ID
Sbjct: 839 RKLIKGDIFDGDEVGID 855
>gi|30019323|ref|NP_830954.1| ClpB protein [Bacillus cereus ATCC 14579]
gi|218235585|ref|YP_002365956.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus B4264]
gi|228951654|ref|ZP_04113757.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228957544|ref|ZP_04119296.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229043019|ref|ZP_04190750.1| Chaperone protein clpB 1 [Bacillus cereus AH676]
gi|229108730|ref|ZP_04238340.1| Chaperone protein clpB 1 [Bacillus cereus Rock1-15]
gi|229126580|ref|ZP_04255594.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-Cer4]
gi|229143880|ref|ZP_04272299.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST24]
gi|296501865|ref|YP_003663565.1| ClpB protein [Bacillus thuringiensis BMB171]
gi|423423352|ref|ZP_17400383.1| chaperone ClpB [Bacillus cereus BAG3X2-2]
gi|423505134|ref|ZP_17481725.1| chaperone ClpB [Bacillus cereus HD73]
gi|423629860|ref|ZP_17605608.1| chaperone ClpB [Bacillus cereus VD154]
gi|449088057|ref|YP_007420498.1| ClpB protein [Bacillus thuringiensis serovar kurstaki str. HD73]
gi|54035819|sp|Q81GM5.1|CLPB_BACCR RecName: Full=Chaperone protein ClpB
gi|29894866|gb|AAP08155.1| ClpB protein [Bacillus cereus ATCC 14579]
gi|218163542|gb|ACK63534.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus B4264]
gi|228639641|gb|EEK96052.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST24]
gi|228656969|gb|EEL12793.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-Cer4]
gi|228674760|gb|EEL29994.1| Chaperone protein clpB 1 [Bacillus cereus Rock1-15]
gi|228726359|gb|EEL77585.1| Chaperone protein clpB 1 [Bacillus cereus AH676]
gi|228802136|gb|EEM49001.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228808047|gb|EEM54563.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|296322917|gb|ADH05845.1| ClpB protein [Bacillus thuringiensis BMB171]
gi|401115634|gb|EJQ23482.1| chaperone ClpB [Bacillus cereus BAG3X2-2]
gi|401266145|gb|EJR72224.1| chaperone ClpB [Bacillus cereus VD154]
gi|402454533|gb|EJV86324.1| chaperone ClpB [Bacillus cereus HD73]
gi|449021814|gb|AGE76977.1| ClpB protein [Bacillus thuringiensis serovar kurstaki str. HD73]
Length = 866
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/874 (52%), Positives = 626/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|119382819|ref|YP_913875.1| ATPase [Paracoccus denitrificans PD1222]
gi|119372586|gb|ABL68179.1| ATPase AAA-2 domain protein [Paracoccus denitrificans PD1222]
Length = 875
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/857 (50%), Positives = 615/857 (71%), Gaps = 21/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT ++ + A +A + + P HL AL+ D G + I AGG+ AQ
Sbjct: 1 MDMEKFTERSRGFLQAAQTIAIREENQRVMPEHLLKALMDDDQGFASNLIARAGGD--AQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-LE 119
+ + +QA++K P + ++ ++++V+ A+ K GD+ + ++++ L +
Sbjct: 59 AVRQAVDQAVEKQPKVSGGQGQVYIDPSMVRVLDEAEKLAKKAGDSFVPAERVLTALAIV 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
++ D V + S + +R +GR ++AS + +++AL Y R+L E A GK
Sbjct: 119 NTNARDALAAGKVTAQALNSAINDVR--KGRTADTASAEDSYEALSKYARNLTEAAAEGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DP+IGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L + +
Sbjct: 177 IDPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVDGDVPESLRNKQ 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L ALDMGAL+AGAKYRGEFEERLK+VLKE+E A G+++LFIDE+H+++GAG+T+G+MDAA
Sbjct: 237 LWALDMGALIAGAKYRGEFEERLKSVLKEIENAAGEIVLFIDELHVLVGAGKTDGAMDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L C+GATTL+EYRKY+EKDAA RRFQ V + EP+V DT+SILRG+KEK
Sbjct: 297 NLIKPALARGELHCVGATTLDEYRKYIEKDAALARRFQPVMIEEPTVEDTISILRGIKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+++DS+PEE+D L+
Sbjct: 357 YELHHGVRISDAALVAAATLSHRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEELDALD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +Q++IE AL+KE D AS+ RL ++ K+L +L++K + R++ E+++++ R LK
Sbjct: 417 RQILQMQIEAEALKKEDDAASQDRLEKLEKQLSELQEKSATMTARWQAERDKLEGSRNLK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
++ + L +A+R +LARA +L YG I +E + + EG S++ M+ E V P+QI
Sbjct: 477 EQLDRARAELDQAKREGNLARAGELSYGIIPGLERQLAESEG--SEDGPMVEEAVRPEQI 534
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEVV RWTGIP +++ + E+E+L IG +EAV A++ +V R+RAGL P++
Sbjct: 535 AEVVERWTGIPTSKMLEGEREKLLKMEDVLSKRVIGQSEAVTAISNAVRRARAGLNDPKR 594
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KA+AE LFDD++ +VRIDMSE+ME+HSV+RLIGAPPGYVG+
Sbjct: 595 PLGSFLFLGPTGVGKTELTKAIAEYLFDDDSAMVRIDMSEFMEKHSVARLIGAPPGYVGY 654
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
+EGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDG+LTDGQGRTVDF+ T+I++
Sbjct: 655 DEGGVLTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGQLTDGQGRTVDFKQTLIVL 714
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLGA+ L + G + Q AR QV+ VR HFRPE LNRLDEI++F L+ E + +
Sbjct: 715 TSNLGAQALSALPEGADSGQ-ARAQVMDAVRAHFRPEFLNRLDEIIIFHRLTRENMDGIV 773
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
R+Q+ + RLA+ + L + +AAL + E YDP++GARP++R +++ + L+ M++
Sbjct: 774 RIQLWQLETRLAQHKIGLDLDEAALKWLADEGYDPVFGARPLKRVMQRSLQNPLAEMILA 833
Query: 827 EEIDENSTVYIDASPKG 843
E+ + TV++ A P G
Sbjct: 834 GEVLDGQTVHVSAGPDG 850
>gi|229149475|ref|ZP_04277711.1| Chaperone protein clpB 1 [Bacillus cereus m1550]
gi|228634117|gb|EEK90710.1| Chaperone protein clpB 1 [Bacillus cereus m1550]
Length = 866
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/861 (52%), Positives = 619/861 (71%), Gaps = 29/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTIHLLFALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYID 838
T+L+R L+ I +NS V +D
Sbjct: 835 TKLARELIAGTITDNSHVVVD 855
>gi|326791137|ref|YP_004308958.1| ATP-dependent chaperone ClpB [Clostridium lentocellum DSM 5427]
gi|326541901|gb|ADZ83760.1| ATP-dependent chaperone ClpB [Clostridium lentocellum DSM 5427]
Length = 867
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/877 (50%), Positives = 619/877 (70%), Gaps = 35/877 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
MN FT K+ EAI A + A S + Q LHL ALL+ G+ + N +
Sbjct: 1 MNAQNFTKKSIEAIQSAQQSAISNQNNQIESLHLLYALLTQEQGLIPHLLTKMNVSVSSM 60
Query: 59 AQSAERVFNQAMKKLPSQTPAP----DEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI 114
QS ++ + KLP + P D++ S+ + K++ ++ K+ D +++V+ ++
Sbjct: 61 TQSV----SEDIAKLP-RVSGPGRELDKVYVSSEVDKILSESEKIAKSMSDEYISVEHIM 115
Query: 115 LGLLEDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLV 172
L L+E S L K G+A + ++RG V S + T+ L YG DLV
Sbjct: 116 LALIEVSSGYCEKLLKAYGIAKKPFMVVLTEIRG--NTHVTSEEPEGTYDVLNKYGYDLV 173
Query: 173 EQAG--KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP 230
E+A K+DPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+ EGLAQRIVRGDVP
Sbjct: 174 ERAKEQKIDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAIAEGLAQRIVRGDVP 233
Query: 231 SNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT 290
L D R+ ALDMG+L+AGAKYRGEFEERLKAVL+E++++EGK+ILFIDE+H ++GAG+T
Sbjct: 234 ETLRDRRIFALDMGSLIAGAKYRGEFEERLKAVLQEIKKSEGKIILFIDELHTIVGAGKT 293
Query: 291 EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSI 350
EGSMDA NL KPMLARG+L CIGATTL EYR+Y+EKDAA RRFQ V V EP+V DT++I
Sbjct: 294 EGSMDAGNLLKPMLARGELHCIGATTLNEYRQYIEKDAALARRFQPVMVEEPTVEDTIAI 353
Query: 351 LRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQP 410
LRG+KE+YE +HGV+IQD AL+ AA LS RYI+ R LPDKAIDLVDEACA +R ++DS P
Sbjct: 354 LRGIKERYEIYHGVQIQDNALIAAATLSDRYISDRFLPDKAIDLVDEACAMLRTEIDSMP 413
Query: 411 EEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
E+D + RK +QLEI AL+KE D SK L + +KEL +LRDK + + +++ EK+ I
Sbjct: 414 TELDEIARKVLQLEIAETALKKEDDPISKQNLADTQKELAELRDKFKAMRTQWENEKDVI 473
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLML 528
++R +K++ E +Q+AER YD +AA+L+YG I ++ + + E + E +L
Sbjct: 474 TKVRGIKEEIETATANMQKAEREYDYNKAAELKYGIIPGLKKQLEEAEAMAYKGSEGSLL 533
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRS 577
+ V ++IA++++RWT IP+T+L + E+ +R+IG EAV+ V +++LRS
Sbjct: 534 RDKVNEEEIAKIIARWTQIPITKLMEGERHKLLRLEEILHKRVIGQNEAVDKVTDAILRS 593
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAG+ P++P GSFLFLGPTGVGKTELAKALAE LFDDE+ ++RIDMSEYME+H+V+RLI
Sbjct: 594 RAGIKDPRRPIGSFLFLGPTGVGKTELAKALAEALFDDEHSMIRIDMSEYMEKHAVARLI 653
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+EEGGQLTEAVRR+PY+V+LFDEVEKAH VFN LLQVLDDGR+TD +GRTV
Sbjct: 654 GAPPGYVGYEEGGQLTEAVRRKPYAVILFDEVEKAHPDVFNVLLQVLDDGRITDSKGRTV 713
Query: 698 DFRNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFD 755
DF+NT+II+TSNLG++ +L G+ G+++ + A + V ++ HFRPE LNRLDEIV++
Sbjct: 714 DFKNTIIILTSNLGSQAILEGINSQGEISEE-AEETVNHLLKTHFRPEFLNRLDEIVLYK 772
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PL ++ + L KD+ RL + + + +T+A+ + + +DP++GARP++R+L++K
Sbjct: 773 PLQQHEIVHIVGLLEKDLNKRLENQQLHVRLTEASKAYIAEQGFDPVFGARPLKRFLQRK 832
Query: 816 VVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQK 852
V T ++R L+ EE++ ST +D + + L R++K
Sbjct: 833 VETLIARTLIAEEVEPFSTFVVDY--EDEQLKVRIEK 867
>gi|242040571|ref|XP_002467680.1| hypothetical protein SORBIDRAFT_01g032210 [Sorghum bicolor]
gi|241921534|gb|EER94678.1| hypothetical protein SORBIDRAFT_01g032210 [Sorghum bicolor]
Length = 983
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/861 (51%), Positives = 606/861 (70%), Gaps = 34/861 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT +AI + E+A + H HL +LL +G+ + + AG +N R
Sbjct: 94 EFTDMAWQAIVSSPEVAKESKHQIVETEHLMKSLLEQRNGLARRIFSKAGVDNT-----R 148
Query: 65 VFNQAMKKLPSQTPAPDEIPASTT---LIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ + A K + Q E P S L +I+RA+ +K +GD++++V+ L+LG ED
Sbjct: 149 LLDAAEKFIQRQPKVLGEEPGSMLGRDLEALIQRARDFKKEYGDSYVSVEHLVLGFAEDK 208
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LFK+ V V +KS +E +RGK+ + G ++AL+ YG+DL A GKL
Sbjct: 209 RFGKQLFKDFQVTVKTLKSAIESIRGKQNVMDQDPEG--KYEALEKYGKDLTAMARQGKL 266
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L + RL
Sbjct: 267 DPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPQALTNRRL 326
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFE+RLKAVLKEV +++G+ ILFIDEIH V+GAG T G+MDA N
Sbjct: 327 IALDMGALIAGAKYRGEFEDRLKAVLKEVTDSDGQTILFIDEIHTVVGAGATNGAMDAGN 386
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +PSV DT+SILRGL+E+Y
Sbjct: 387 LLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTISILRGLRERY 446
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDE+ A +++++ S+P +D ++R
Sbjct: 447 ELHHGVRISDSALVAAAVLSDRYISGRFLPDKAIDLVDESAAKLKMEITSKPTALDEIDR 506
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
++LE+E +L + DKASK RL + EL L+DK + L R++ EK + +I+ +K+
Sbjct: 507 AVLKLEMERLSLTNDTDKASKDRLSRLEAELSLLKDKQRQLTERWEHEKSVMTKIQSIKE 566
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAI----GQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG++ ++ + +L+ QS ML E V
Sbjct: 567 EIDRVNVEIQQAEREYDLNRAAELKYGSLNALQRQLQMTEKELDEYQSSGKSMLREEVTQ 626
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D IAE+VSRWTGIPV++L Q+++ +R++G AV AVAE++ RSRAGL
Sbjct: 627 DDIAEIVSRWTGIPVSKLKQSDREKLLFLEEELHKRVVGQDPAVKAVAEAIQRSRAGLSD 686
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+F+GPTGVGKTELAKALA +F+ E +VRIDMSEYME+HSVSRLIGAPPGY
Sbjct: 687 PNRPIASFMFMGPTGVGKTELAKALAAFMFNTEEAVVRIDMSEYMEKHSVSRLIGAPPGY 746
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRRRPYSVVLFDE+EKAH VFN LQ+LDDGR+TD QGR V F NT+
Sbjct: 747 VGYEEGGQLTEAVRRRPYSVVLFDEIEKAHSDVFNVFLQILDDGRVTDSQGRKVSFTNTI 806
Query: 704 IIMTSNLGAEHLLS-----GMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
IIMTSN+G++++L+ G + + +V+ R FRPE +NR+DE +VF PL
Sbjct: 807 IIMTSNVGSQYILNMDEEVGSSDSAYENIKK-RVMDAARSVFRPEFMNRVDEYIVFKPLE 865
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
EQ+ + +LQ+ V R+A+R + L V+ A++ + + YDP YGARP++R +++ V
Sbjct: 866 REQINSIVKLQLARVQKRIADRKIKLEVSPGAIEFLGSLGYDPNYGARPVKRVIQQYVEN 925
Query: 819 ELSRMLVREEIDENSTVYIDA 839
EL++ ++R + + ++++D
Sbjct: 926 ELAKGILRGDFKDEDSIFVDT 946
>gi|334880447|emb|CCB81184.1| chaperone protein ClpB [Lactobacillus pentosus MP-10]
Length = 867
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/870 (52%), Positives = 613/870 (70%), Gaps = 27/870 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE--NA 58
MNP++FT +A+ A +A + H + HL L+ P + Q + AG +
Sbjct: 1 MNPEQFTESLQQALQEAQHIAQTRRHQEIGVPHL-FKFLTQPGELVRQIFSEAGADLDQL 59
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q +R + + S S++L +++ A A +K+ GD +LA D L L L+
Sbjct: 60 QQELDRELDDI--AVVSGGNVQYGSTMSSSLATLMQTADAKRKSLGDDYLATDTLALALM 117
Query: 119 EDS--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ + Q+ G+ +VK+ V+++RG G++V S + + +QAL+ YG DLV+QA
Sbjct: 118 DQTGDQLTKYLTSQGITAGQVKNAVDRIRG--GQRVTSRNQEDQYQALEKYGVDLVKQAR 175
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
G DPVIGRDEEI V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP NL
Sbjct: 176 QGNQDPVIGRDEEILDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPENLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D L +LDMG+L+AGAKYRGEFEERLKAVLKE+++++G++I+FIDEIH ++GAG+TEGSM
Sbjct: 236 DKTLFSLDMGSLIAGAKYRGEFEERLKAVLKEIKKSDGQIIMFIDEIHNIVGAGKTEGSM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L IGATTL+EYR+Y+EKD A ERRFQ+V VAEPSV DT+SILRGL
Sbjct: 296 DAGNLLKPMLARGELHLIGATTLDEYRQYMEKDKALERRFQKVLVAEPSVDDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGVRI D ALV AA+LS RYIT R+LPDKA+DLVDEA A +RV+++S P E+D
Sbjct: 356 KERFEIHHGVRIHDNALVAAAKLSDRYITDRYLPDKALDLVDEASAEIRVEMNSNPTELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ M+LE+E AL+KE D AS RL +V+KEL ++K + L R+ EK+ + +
Sbjct: 416 QVNRQLMRLEVEEAALKKETDDASVKRLGDVQKELASAKEKQRALSERWDSEKKSLQALS 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
K ++ L+ AE YDL +AA L++G I E+E + +E N E+ ++ E+V P
Sbjct: 476 DKKSALDKAKHELETAESNYDLEKAAKLQHGTIPELEQELKAMEANDHHEDWLVEESVTP 535
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGR 583
DQIA VVSR TGIPV +L E+E+L+ LA+ AV+AV+++VLRSRAGL
Sbjct: 536 DQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDAVLRSRAGLQD 595
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSF+FLGPTGVGKTELAKALAE LFD ++ +VRIDMSEYME+ SVSRL+GA PGY
Sbjct: 596 PNRPLGSFMFLGPTGVGKTELAKALAENLFDADDYMVRIDMSEYMEKESVSRLVGAAPGY 655
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR PYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+
Sbjct: 656 VGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTI 715
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSNLG+E LL+G+ G ++ + QV+Q V+ F+PE LNR+D+I++F PL +
Sbjct: 716 LIMTSNLGSELLLAGVDDQGHLSDET-HSQVMQLVQSRFKPEFLNRIDDIIMFTPLQLDA 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++ + ++ RL +R + L ++D A + + Y+P YGARP+RR++ V T L+
Sbjct: 775 IEEIVVKLIDRLSARLQDREITLKISDEAKKWIAKQGYEPAYGARPLRRFITNHVETPLA 834
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+ ++ + STV I+ D+LV+ Q
Sbjct: 835 KEIIAGRVAPKSTVAINLL--DDHLVFENQ 862
>gi|227486784|ref|ZP_03917100.1| ATP-binding ClpB chaperone [Anaerococcus lactolyticus ATCC 51172]
gi|227235254|gb|EEI85269.1| ATP-binding ClpB chaperone [Anaerococcus lactolyticus ATCC 51172]
Length = 858
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/853 (49%), Positives = 613/853 (71%), Gaps = 21/853 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K+ EAI A+ +A + + HLA++L+ PS + ++ G +
Sbjct: 1 MDNNKLTQKSIEAINNANSMAIKDANPEVNEFHLALSLVDSPSSYVSMVLSKMGVD--VN 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-E 119
+ ++ ++ LP Q+ + P S ++ +A+ A GD+ ++V+ + L LL E
Sbjct: 59 AYKKKIEDKIENLPKQSGNANTYP-SQVFQRIFLKAEDEADAMGDSFVSVEHIFLSLLKE 117
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
++++ + KE ++ K V K+R G+KV + + + T L+ +GRDL ++A GK
Sbjct: 118 NTEMSPINKEFNISYKVFKDYVLKVRN--GQKVTTDNPEETSNPLEKFGRDLTQEARDGK 175
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DPVIGRD EIR +RILSRR KNNPVLIG+PGVGKTA+VEGLAQRIV DVP L R
Sbjct: 176 IDPVIGRDAEIRNALRILSRRKKNNPVLIGQPGVGKTAIVEGLAQRIVNNDVPEPLQGRR 235
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+ +LDMGALVAGAKYRG+FEERLKAV++EV++++G++I+FIDEIH ++GAG++EG+MDA+
Sbjct: 236 IFSLDMGALVAGAKYRGQFEERLKAVIEEVKKSDGQIIMFIDEIHTIVGAGKSEGAMDAS 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPMLARG+++ IGATTL EYR+Y+EKD A ERRFQ+V V EPSV DT+SILRG+KEK
Sbjct: 296 NIMKPMLARGEIKVIGATTLNEYREYIEKDGALERRFQKVMVEEPSVEDTISILRGIKEK 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HG+RIQD A++ AA+LS RYI+ R LPDKAIDL+DEACA VR ++D+ P +D +
Sbjct: 356 YEIFHGIRIQDSAVIAAAELSDRYISDRFLPDKAIDLMDEACATVRTEIDTMPAYLDEQK 415
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK +QL+IE+ AL+KE+D SK RL ++ KEL DL D +++K++K ID+++ +K
Sbjct: 416 RKLLQLQIEITALKKEEDDYSKKRLADLEKELADLSDTFNEDFLKWKEQKSAIDDVKSIK 475
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
++ +++ + +AER YD + ++L+YG + E+E + + +DE+ + E V + +
Sbjct: 476 EEIDKVKVEIDQAERNYDFEKLSELKYGKLAELENKLKEASSTNNDES-SIKEEVTDEDV 534
Query: 538 AEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
A+VVS WT IPV++L + E+ ER+IG EA+ AV+++++R+R+GL +
Sbjct: 535 ADVVSSWTNIPVSKLVETERTKILHLGETLHERVIGQDEAIKAVSDAIIRARSGLKEQNR 594
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSF+FLGPTGVGKTELAK L E +FDDE+ ++RIDMSEYME++SVSRLIGA PGYVG+
Sbjct: 595 PIGSFIFLGPTGVGKTELAKTLTEAMFDDEHNMIRIDMSEYMEKYSVSRLIGAAPGYVGY 654
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQVLDDGRLTD QGRTVDF+NT+IIM
Sbjct: 655 EEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVDFKNTIIIM 714
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEV-RKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
TSN+G+E L+ G+ T++ + + EV R+ F+PE LNR+D+IV+F PL+ +Q+ K+
Sbjct: 715 TSNIGSEFLIDGLNKDGTIKEENQKKVDEVLRRSFKPEFLNRIDDIVMFTPLTSDQVYKI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
LQ+ ++ RLA+R + L +T A + +LA SYD YGARP++R+L++ V T+L ++++
Sbjct: 775 IDLQIDNIRKRLADRDIKLEITPEAKEYILANSYDVEYGARPVKRYLQRNVETKLGKLII 834
Query: 826 REEIDENSTVYID 838
++ + T +D
Sbjct: 835 EGKVADRDTAILD 847
>gi|423579476|ref|ZP_17555587.1| chaperone ClpB [Bacillus cereus VD014]
gi|401218336|gb|EJR25018.1| chaperone ClpB [Bacillus cereus VD014]
Length = 866
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/874 (52%), Positives = 625/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAI 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGARNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|423638065|ref|ZP_17613718.1| chaperone ClpB [Bacillus cereus VD156]
gi|401272025|gb|EJR78025.1| chaperone ClpB [Bacillus cereus VD156]
Length = 866
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/874 (52%), Positives = 625/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL ++ EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQHELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEENGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAANEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|441203397|ref|ZP_20971627.1| ATP-dependent chaperone protein ClpB [Mycobacterium smegmatis MKD8]
gi|440629788|gb|ELQ91569.1| ATP-dependent chaperone protein ClpB [Mycobacterium smegmatis MKD8]
Length = 848
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/863 (53%), Positives = 606/863 (70%), Gaps = 36/863 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + A+SAG+ + P HL +ALL+ GI A + G E A
Sbjct: 4 FNP---TTKTQAALTSALQAASSAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATI 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
E + + +LPS + A + S + I AQ+ D +++ + L++GL
Sbjct: 61 RTET--QRLLDRLPSASGASSQPQLSRESLAAITTAQSLATEMDDEYVSTEHLMVGLATG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
DS++ L G + ++ K+RG +V S + T+QAL+ Y DL +A GK
Sbjct: 119 DSEVAKLLTGHGASPQALRDAFVKVRGSA--RVTSPDPEGTYQALEKYSTDLTARAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+IALD+G++VAGAKYRGEFEERLKAVL +++ + G+VI FIDE+H ++GAG T E +MDA
Sbjct: 237 VIALDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV+V EPSV DTV ILRGLK+
Sbjct: 297 GNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDTVGILRGLKD 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+P EID +
Sbjct: 357 RYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE ALEKE+D+ASK RL ++R EL D ++KL L R++ EK I+ +R L
Sbjct: 417 ERLVRRLEIEEMALEKEEDEASKDRLEKLRAELADHKEKLSELTTRWQNEKNAINVVREL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLEGNQSDENLMLTETVGPD 535
K++ + L AER DLA+AA+LRYG I EVE + L ++ ENLML E VGPD
Sbjct: 477 KEQLDTLRGEADRAERDGDLAKAAELRYGRIPEVEKKLDAALPAAEARENLMLKEEVGPD 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
IAEVV WTGIP R+ + E +R++G +AV AV+++V RSRAG+ P
Sbjct: 537 DIAEVVEAWTGIPSGRMLEGETAKLLRMEEELGKRVVGQRKAVQAVSDAVRRSRAGVADP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+PTGSF+FLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RL+GAPPGY+
Sbjct: 597 NRPTGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYI 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+++GGQLTEAVRRRPY+V+LFDE+EKAH VF+ LLQVLD+GRLTDGQGRTVDFRNT++
Sbjct: 657 GYDQGGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTIL 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSNLGA DQV+ VR F+PE +NRLD++++FD L+ E+L +
Sbjct: 717 ILTSNLGAGG-------------NEDQVMAAVRSAFKPEFINRLDDVIIFDGLNPEELVQ 763
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+ +A RL +R + L V+ A + +DP+YGARP+RR +++ + +L++ML
Sbjct: 764 IVDIQLAQLAKRLEQRRLTLEVSLPAKKWLGQRGFDPLYGARPLRRLVQQAIGDQLAKML 823
Query: 825 VREEIDENSTVYIDASPKGDNLV 847
+ E+ + V ++ SP G++LV
Sbjct: 824 LAGEVHDGDIVPVNVSPDGESLV 846
>gi|345888432|ref|ZP_08839519.1| chaperone ClpB [Bilophila sp. 4_1_30]
gi|345040720|gb|EGW44952.1| chaperone ClpB [Bilophila sp. 4_1_30]
Length = 873
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/864 (52%), Positives = 610/864 (70%), Gaps = 27/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++FT K+ EA+ A LA GH + HLA+AL++ G + + G A +
Sbjct: 1 MDINRFTEKSREALTTAQGLAAQYGHQEVDAEHLALALVNQEDGFVPRVLERVG--VAPK 58
Query: 61 SAERVFNQAMKKLPS-QTPAPD--EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ +KK PS + P + I S + K I A+A K D +++V+ + L
Sbjct: 59 ALVTALEAVLKKRPSVRGPGAEMGTITISQRVAKAIANAEALAKRLRDEYVSVEHIFAEL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
L + + +G + +AG++ + + +RG +V SA+ + +++AL YGR+LVE
Sbjct: 119 LREPASTGLGQVAADAGLSADKFTETMMAVRGPH--RVTSANPEESYEALSKYGRNLVEA 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRRV+RILSRRTKNNPVLIGE GVGKTA+ EGLA RIV+GDVP
Sbjct: 177 ASKGKLDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIAEGLAYRIVKGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L + + ALDMGAL+AGAKYRGEFEERLKAVL EV+++EG++ILFIDE+H ++GAG+T+G
Sbjct: 237 LKNKTIFALDMGALIAGAKYRGEFEERLKAVLSEVQKSEGQIILFIDELHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KP+LARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EPSV DT+SILR
Sbjct: 297 AMDAGNLLKPLLARGELHCIGATTLDEYRKYIEKDPALERRFQTVLVEEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHGVRI D ++V A LS RYIT R LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLKERFEVHHGVRISDSSIVEAVVLSNRYITDRQLPDKAIDLIDEAAAMIRTEIDSLPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D RK MQLEIE AL KE D AS+ RL ++ EL +L+ L +++ EK I+
Sbjct: 417 LDEANRKVMQLEIEREALRKETDDASRERLEKLENELRNLQMTQAELKGQWENEKGVINV 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETV 532
+R LK + E+ A+++A RR DL A++L+Y + E+E + + E Q L L + V
Sbjct: 477 VRDLKGEIEQTRLAIEDATRRGDLQAASELKYAKLPELEKRLHEAENGQEAPRL-LKQEV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
PD +A++V+RWTGIPVTRL Q+E+ ER+IG EAV AV+++VLR+RAGL
Sbjct: 536 RPDDVADIVARWTGIPVTRLLQSERDKLIHLPDKLHERVIGQDEAVQAVSDAVLRTRAGL 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTEL KALAE LFD E +VR+DMSEYME+HSV+RLIGAPP
Sbjct: 596 SDPSRPQGSFIFLGPTGVGKTELCKALAEALFDSEENIVRLDMSEYMEKHSVARLIGAPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PYSV+LFDE+EKAH VFNTLLQ+LDDGRLTD QGRTVDFRN
Sbjct: 656 GYVGYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNTLLQLLDDGRLTDSQGRTVDFRN 715
Query: 702 TVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
T++IMTSN+G+ +L G+ G V +V+ E+R+HF+PE LNR+DE V+F PL
Sbjct: 716 TIVIMTSNIGSYRMLDGINPDGSFASDVY-TEVMGELRQHFKPEFLNRVDETVLFKPLLP 774
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
EQ+ ++ LQ++ + RL ER +AL +T+AA + + +YDP YGARP++R+L+ V T
Sbjct: 775 EQIGQIIDLQLRRLQKRLEERKIALELTEAAHEFIGDAAYDPHYGARPLKRYLQSHVETP 834
Query: 820 LSRMLVREEIDENSTVYIDASPKG 843
L++ ++ ++ ++ V IDA+ G
Sbjct: 835 LAKFIIGGQVRDDQRVVIDATEDG 858
>gi|393246763|gb|EJD54271.1| hypothetical protein AURDEDRAFT_109980 [Auricularia delicata
TFB-10046 SS5]
Length = 899
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/859 (52%), Positives = 602/859 (70%), Gaps = 32/859 (3%)
Query: 6 FTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSD---PS------GIFAQAINNAGGE 56
FT K +E++A A++LA +AQ P HLA ALL++ PS IFA AI AGG+
Sbjct: 7 FTDKASESLAAAYQLAKDHHNAQVHPAHLASALLNEGGAPSIQSAQHSIFAGAIQKAGGD 66
Query: 57 NAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILG 116
AA R + + +LP+Q PAP+E+ +++++R AQ+ QK D+++A D L+L
Sbjct: 67 TAA--VHRAIQKLIVRLPAQEPAPEEVAPGPAMMRLLREAQSLQKTMNDSYIAQDHLLLA 124
Query: 117 LLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
LL+D + D+FK ++ A +KS +E +R G++V+S + ++ F AL Y +DL A
Sbjct: 125 LLKDPNMADVFKSCAISDAALKSAIEGMRA--GKRVDSKNAESGFDALNKYAQDLTALAE 182
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD EIRRV+RILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI++ DVP++L
Sbjct: 183 EGKLDPVIGRDNEIRRVIRILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIKRDVPASLI 242
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGK---VILFIDEIHLVLGAGRTE 291
+L ++DMGAL+AGAKY+GE+EER+K++L EVE++ + VILFIDE+HL++ E
Sbjct: 243 -CKLFSVDMGALMAGAKYKGEYEERVKSLLDEVEKSAEQGTPVILFIDEMHLLMAGRGGE 301
Query: 292 GS-MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSI 350
G MDAANLFKP+LARG+LRCIGATTL EYRKY+E D A ERRF QV V EPSVP+T+SI
Sbjct: 302 GGGMDAANLFKPLLARGKLRCIGATTLAEYRKYIETDQALERRFAQVIVNEPSVPETLSI 361
Query: 351 LRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQP 410
LRGL+EKYE H VRI D ALV AA L+ RY+T R LPD AIDLVDEACA+VRV ++ P
Sbjct: 362 LRGLREKYELFHAVRIMDGALVQAATLAKRYLTARRLPDAAIDLVDEACASVRVTRETAP 421
Query: 411 EEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
EEID LER++++L++E+HALE+EKD ASK RLV RK DL ++L+PL Y+ EK+R
Sbjct: 422 EEIDKLERRKLELDVEIHALEREKDTASKDRLVVARKARADLDEQLRPLKAAYEAEKQRG 481
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQ-SDENLMLT 529
DEI ++++ +EL +AERRYDLA +DLRY AI +++ + QLE + ++E T
Sbjct: 482 DEIANVRRRIDELRAKADDAERRYDLATVSDLRYYAIPDLQKKLEQLEARKAAEEGDAGT 541
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSR 578
+ V P+ IAE+VSRWTG+PVTRL EKE+L +G EAV AVA ++ SR
Sbjct: 542 DVVSPEAIAEIVSRWTGVPVTRLVATEKEKLLKMEKIISETVVGQPEAVKAVANAIRLSR 601
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
+GL +P SFL GP+G GKT ++K LA+ LFD + ++RID SEY E+HS+SRLIG
Sbjct: 602 SGLRNAGRPIASFLMAGPSGTGKTLMSKTLAQLLFDSPDAMIRIDGSEYSEKHSISRLIG 661
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVGH++GGQLTE VRR+PY +VL DE+EKA LQVLDDGRLTDGQGR VD
Sbjct: 662 APPGYVGHDQGGQLTEYVRRKPYCIVLIDEIEKAAREFVTLFLQVLDDGRLTDGQGRVVD 721
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
FRNTVIIMTSNLGA +L + VL ++ HF PE +NR+DEI+VF PL
Sbjct: 722 FRNTVIIMTSNLGAAYLNENAADGPVPAAVKQNVLGTIQAHFPPEFVNRIDEIIVFRPLG 781
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
+ K+ L++K+V RLAER + L V A D + A Y P YGARP++R ++ +++
Sbjct: 782 RSSVAKIVDLRLKEVQERLAERKIVLDVDAPARDYLAARGYSPTYGARPLQRAIQSELLN 841
Query: 819 ELSRMLVREEIDENSTVYI 837
LS +++ E + + TV +
Sbjct: 842 PLSVLILGERVRDGETVRV 860
>gi|312793685|ref|YP_004026608.1| ATP-dependent chaperone clpb [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180825|gb|ADQ40995.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 864
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/860 (50%), Positives = 618/860 (71%), Gaps = 28/860 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN ++FT A+ A A H + P HL AL+++ + A+ + N G + +
Sbjct: 1 MNMERFTQSLQTALLDAQNTAIVYKHQEIGPEHLHYALVNEDDKLVAKILKNMGID--TE 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+R + +KK+P P + S + +++ +A+ + D +++V+ + L ++
Sbjct: 59 LYKRDIEEQLKKIPMVYGPGASTVYVSRYVNEILIKAEEEARKFKDEYISVEHVYLAMI- 117
Query: 120 DSQI---GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
DS I +F++ G+ + ++ K+RG + ++ + + + ++ LK YGRDL E A
Sbjct: 118 DSDIPSSKSIFRKYGITREKFLQQLYKIRGNQ--RITNPNPEEVYEVLKKYGRDLTELAR 175
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L
Sbjct: 176 KGKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + ALD+G+L+AGAKYRGEFEERLKAVL E+ +EG++ILFIDEIH ++GAGR EG+M
Sbjct: 236 DKTIFALDLGSLIAGAKYRGEFEERLKAVLNEIIASEGRIILFIDEIHNIVGAGRAEGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT++EYRKY+EKDAA ERRFQ V V PSV DT+SILRGL
Sbjct: 296 DAGNLLKPMLARGELHCIGATTIDEYRKYIEKDAALERRFQPVLVNPPSVEDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGVRI D AL+ AA+LS RYI+ R LPDKAIDL+DEA A +R ++DS P E+D
Sbjct: 356 KERFEIHHGVRITDDALIAAAKLSDRYISDRFLPDKAIDLIDEAAALLRTEIDSMPTELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQL IE + L+KE++ ++K R+ E+ KE+ L+ + L +++ EKE I E+R
Sbjct: 416 EITRKIMQLRIEKNVLQKEENPSAKQRIEEIEKEIAQLQSRADELSAQWEYEKELIKEVR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLMLTE 530
R+K++ E + ++EAER YDL R ++L+YG + E++ A+ +LE ++ L L E
Sbjct: 476 RIKEEIENVKIQIEEAERNYDLNRLSELKYGKLIELQKALDRKRQELEKIPPEKRL-LKE 534
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRA 579
V ++IA++VS+WTGIPV +L + E++ R++G EA+ AV +++R+RA
Sbjct: 535 EVTEEEIAKIVSKWTGIPVAKLVETERQKILELDKILHRRVVGQDEAIEAVCNAIMRARA 594
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P G+FLFLGPTGVGKTELA+ALAE LFD EN ++RIDM+EYME+HSVSRLIGA
Sbjct: 595 GIKDPRKPIGTFLFLGPTGVGKTELARALAEALFDSENNMIRIDMTEYMEKHSVSRLIGA 654
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVR +PYSVVLFDE+EKAH VFN LLQ++DDGRLTD +GRTVDF
Sbjct: 655 PPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHRDVFNILLQIMDDGRLTDSKGRTVDF 714
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NT+IIMTSNLG+E+LL+ + + + R + +E++ HFRPE LNRLDEI++F PL+
Sbjct: 715 KNTIIIMTSNLGSEYLLNAKISNGEIDEETRKLIDRELKLHFRPEFLNRLDEIIIFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
EQ+ K+ L++ ++ +L E+G+++ +T A + V+ ++D +GARPI+R+L+K V T
Sbjct: 775 KEQIIKIIDLRVAEIQQKLIEKGISIRLTQRAKEFVMENAFDVNFGARPIKRFLQKNVET 834
Query: 819 ELSRMLVREEIDENSTVYID 838
++R +++ I E ++ ID
Sbjct: 835 LIAREILKGTIVEGDSIDID 854
>gi|423654046|ref|ZP_17629345.1| chaperone ClpB [Bacillus cereus VD200]
gi|401296812|gb|EJS02427.1| chaperone ClpB [Bacillus cereus VD200]
Length = 866
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/874 (52%), Positives = 626/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DE+++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEVILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|407703626|ref|YP_006827211.1| Zn-dependent protease [Bacillus thuringiensis MC28]
gi|407381311|gb|AFU11812.1| Chaperone protein clpB 1 [Bacillus thuringiensis MC28]
Length = 866
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/874 (51%), Positives = 624/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVHIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E V +KK PS T + E + ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQDVENV----IKKKPSVTGSGAEAGKLYVTSNLQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINHLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMSAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEADGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TD+A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDSAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|317484560|ref|ZP_07943467.1| ATP-dependent chaperone ClpB [Bilophila wadsworthia 3_1_6]
gi|316924186|gb|EFV45365.1| ATP-dependent chaperone ClpB [Bilophila wadsworthia 3_1_6]
Length = 872
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/864 (52%), Positives = 610/864 (70%), Gaps = 27/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++FT K+ EA+ A LA GH + HLA+AL++ G + + G A +
Sbjct: 1 MDINRFTEKSREALTTAQGLAAQYGHQEVDAEHLALALVNQEDGFVPRVLERVG--VAPK 58
Query: 61 SAERVFNQAMKKLPS-QTPAPD--EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ +KK PS + P + I S + K I A+A K D +++V+ + L
Sbjct: 59 ALVTALEAVLKKRPSVRGPGAEMGTITISQRVAKAIANAEALAKRLRDEYVSVEHIFAEL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
L + + +G + +AG++ + + +RG +V SA+ + +++AL YGR+LVE
Sbjct: 119 LREPASTGLGQVAADAGLSADKFTETMMAVRGPH--RVTSANPEESYEALSKYGRNLVEA 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRRV+RILSRRTKNNPVLIGE GVGKTA+ EGLA RIV+GDVP
Sbjct: 177 ASKGKLDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIAEGLAYRIVKGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L + + ALDMGAL+AGAKYRGEFEERLKAVL EV+++EG++ILFIDE+H ++GAG+T+G
Sbjct: 237 LKNKTIFALDMGALIAGAKYRGEFEERLKAVLSEVQKSEGQIILFIDELHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KP+LARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EPSV DT+SILR
Sbjct: 297 AMDAGNLLKPLLARGELHCIGATTLDEYRKYIEKDPALERRFQTVLVEEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHGVRI D ++V A LS RYIT R LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLKERFEVHHGVRISDSSIVEAVVLSNRYITDRQLPDKAIDLIDEAAAMIRTEIDSLPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D RK MQLEIE AL KE D AS+ RL ++ EL +L+ L +++ EK I+
Sbjct: 417 LDEANRKVMQLEIEREALRKETDDASRERLEKLENELRNLQMTQAELKGQWENEKGVINV 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETV 532
+R LK + E+ A+ +A RR DL A++L+Y + E+E + + E Q L L + V
Sbjct: 477 VRDLKGEIEQTRLAIDDATRRGDLQAASELKYAKLPELEKRLHEAENGQEAPRL-LKQEV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
PD +A++V+RWTGIPVTRL Q+E+ ER+IG EAV AV+++VLR+RAGL
Sbjct: 536 RPDDVADIVARWTGIPVTRLLQSERDKLIHLPDKLHERVIGQDEAVQAVSDAVLRTRAGL 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTEL KALAE LFD E +VR+DMSEYME+HSV+RLIGAPP
Sbjct: 596 SDPSRPQGSFIFLGPTGVGKTELCKALAEALFDSEENIVRLDMSEYMEKHSVARLIGAPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PYSV+LFDE+EKAH VFNTLLQ+LDDGRLTD QGRTVDFRN
Sbjct: 656 GYVGYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNTLLQLLDDGRLTDSQGRTVDFRN 715
Query: 702 TVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
T++IMTSN+G+ +L G+ G V +V+ E+R+HF+PE LNR+DE V+F PL
Sbjct: 716 TIVIMTSNIGSYRMLDGINPDGSFASDVY-TEVMGELRQHFKPEFLNRVDETVLFKPLLP 774
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
EQ+ ++ LQ++ + RL ER +AL +T+AA + + +YDP YGARP++R+L+ V T
Sbjct: 775 EQIGQIIDLQLRRLQKRLEERKIALELTEAAHEFIGDAAYDPHYGARPLKRYLQSHVETP 834
Query: 820 LSRMLVREEIDENSTVYIDASPKG 843
L++ ++ ++ ++ V IDA+ +G
Sbjct: 835 LAKFIIGGQVRDDQRVVIDATEEG 858
>gi|373494780|ref|ZP_09585379.1| chaperone ClpB [Eubacterium infirmum F0142]
gi|371967824|gb|EHO85292.1| chaperone ClpB [Eubacterium infirmum F0142]
Length = 861
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/865 (51%), Positives = 612/865 (70%), Gaps = 26/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T AI +A G+ P H+ +ALL G+ + + E A+
Sbjct: 1 MNIEKYTQNAQAAIVEGQRIAIENGNPSLEPEHINLALLQQSDGLIPRLLKYM--EIDAK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
S ER ++ + KLP + +I AS L +++ ++ + D +++V+ + + LL +
Sbjct: 59 SVERAVSELVDKLPKVSGG--QIYASQRLNSLLKESEKEAERFKDDYVSVEHIYIALLNE 116
Query: 121 --SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
S ++ K+ G++ + K+RG + +V S + + ++AL+ YG+DLVE A G
Sbjct: 117 RKSPFKEVCKKFGISKEGFLEALTKVRGNQ--RVTSQNPEDNYEALEKYGQDLVELARKG 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR ++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRI++GDVP L D
Sbjct: 175 KLDPVIGRDSEIRHAIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKGDVPEGLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ ALDMGAL+AGAK+RGEFEERLKAVL EVE++EG++ILFIDEIH ++GAG+TEGSMDA
Sbjct: 235 TIFALDMGALIAGAKFRGEFEERLKAVLNEVEKSEGRIILFIDEIHTIVGAGKTEGSMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KP LARG+L CIGATTL EYRKY+EKDAA ERRFQ+V V +P + DT+SILRGLKE
Sbjct: 295 GNLLKPKLARGELHCIGATTLTEYRKYIEKDAALERRFQKVMVDQPDINDTISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
++E HHGVRI D AL+ A LS RYIT R LPDKAIDL+DEA + +R ++DS P E+D +
Sbjct: 355 RFEIHHGVRITDNALIACATLSDRYITDRFLPDKAIDLMDEAASRIRTEIDSMPSELDQI 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK MQL+IE AL KE DKASKARL + KEL +L + L +++ EK++I + ++
Sbjct: 415 SRKIMQLQIEKQALLKETDKASKARLEALEKELSELNSESATLRTQWETEKKKITDSKQT 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD--ENLMLTETVGP 534
KQ EEL ++EAER YDL A L+YG + +E + + + +D E+ +L E V
Sbjct: 475 KQDIEELKHRIEEAERAYDLETLAKLKYGELPTLEKKLEEEKQALADKSEDRLLKEEVDV 534
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
++IAEVVS+WTGIPV++L ++E+E+L IG EAV AV++++LR+RAGL
Sbjct: 535 EEIAEVVSQWTGIPVSKLVESEREKLLKLPEILHKRVIGQDEAVVAVSDAILRARAGLKD 594
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
+P GSF+F+GPTGVGKTELAKAL+E LFD E ++RIDMSEYME+HSVSRL+GAPPGY
Sbjct: 595 ENRPIGSFIFMGPTGVGKTELAKALSEALFDTEKNMIRIDMSEYMEKHSVSRLVGAPPGY 654
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTD QGRTVDF+NT+
Sbjct: 655 VGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQLLDDGRLTDNQGRTVDFKNTI 714
Query: 704 IIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
II+TSN+G+ L+ + GK++ +V D V+ ++ FRPE +NR+D+ +VF PL+ Q
Sbjct: 715 IILTSNIGSRELIDRIEEGGKISEEVKED-VISKLHSFFRPEFINRIDDTIVFTPLNKSQ 773
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++ + + + RL+ER + L +++A D + +Y P +GARP++R+++K V T+L+
Sbjct: 774 IGRIIEIALGSIQKRLSERNIKLVLSEAGKDYICDNAYSPEFGARPVKRFMQKYVETKLA 833
Query: 822 RMLVREEIDENSTVYIDASPKGDNL 846
L++ EI + +TV I + +G L
Sbjct: 834 EALIKGEIADGNTVEITSKGEGIEL 858
>gi|116747712|ref|YP_844399.1| ATPase [Syntrophobacter fumaroxidans MPOB]
gi|116696776|gb|ABK15964.1| ATPase AAA-2 domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 873
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/876 (52%), Positives = 630/876 (71%), Gaps = 27/876 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K+ EA+ A A GH + HL +ALL G+ + + +
Sbjct: 1 MDLNKLTIKSQEALKAAETKAIRYGHVEVDVEHLLLALLEQSQGLIPSLLRKMDVQ-VDR 59
Query: 61 SAERVFNQAMKKLPSQTPA--PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
ER+ + KK P P ++ + L +++ +A+ D +++V+ L+L +
Sbjct: 60 LRERLEQELEKKPRVSGPGIEPGKVYITQRLNQLLIKAEEEAGRLKDEYVSVEHLLLAFI 119
Query: 119 ED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++ + G L +E V + +RG + +V SAS +TT++AL+ YGRDLV++A
Sbjct: 120 QEGGATPAGRLLQENRVGKDAFLQTLTSVRGNQ--RVTSASPETTYEALQKYGRDLVQEA 177
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD EIRRVVRILSR+TKNNPVLIGEPGVGKTA+VEGLA RIVRGDVP L
Sbjct: 178 RTNKLDPVIGRDSEIRRVVRILSRKTKNNPVLIGEPGVGKTAIVEGLAHRIVRGDVPEGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + ALDMGALVAGAKYRGEFEERLKAVL+E++E+EG ++LFIDE+H ++GAG+ EGS
Sbjct: 238 KDKAIFALDMGALVAGAKYRGEFEERLKAVLQEIKESEGGILLFIDELHTIVGAGKAEGS 297
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA N+ KPMLARG+L CIGATTL+EYRKY+EKDAA ERRFQ V V +P+V DT+SILRG
Sbjct: 298 MDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDAALERRFQPVLVDQPTVEDTISILRG 357
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HHGV+IQD ALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS+PEE+
Sbjct: 358 LKERYEVHHGVKIQDSALVAAAVLSGRYITDRFLPDKAIDLVDEACAMIRTEIDSRPEEL 417
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D + R+ MQLEIE AL+KEKDKAS+ RL +RKE+ +LR + + +++ EK+ I ++
Sbjct: 418 DEVMRRVMQLEIEEVALKKEKDKASQERLEALRKEIGELRARTDAMSAQWEAEKQAIKKV 477
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS---DENLMLTE 530
+ ++++ E++ ++ AER++DL + A+L++G + ++E + EG S D N +L E
Sbjct: 478 QAIREEIEKVRRDIEVAERQFDLQKVAELKHGLMPDLEKKLKTEEGGLSADPDGNRLLRE 537
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRA 579
V ++IAE++SRWTGIPVTRL + E+E R++G EAV+ VA++V+R+R+
Sbjct: 538 EVTEEEIAEIISRWTGIPVTRLVEGEREKLLRLDEVLHRRIVGQNEAVSLVADAVIRARS 597
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTEL KALAE LFD E+ +VRIDMSEYME+H+VSRLIGA
Sbjct: 598 GIKDPRRPIGSFIFLGPTGVGKTELGKALAEALFDSEDNVVRIDMSEYMEKHAVSRLIGA 657
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGRLTD QGRTVDF
Sbjct: 658 PPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNVLLQLLDDGRLTDAQGRTVDF 717
Query: 700 RNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NTV+IMTSN+G+ +LL G+ G++ + AR+QV+ ++R+ FRPE LNR+D+IV+F PL
Sbjct: 718 KNTVVIMTSNIGSVYLLDGVTDDGQIK-ERAREQVMSDLRRQFRPEFLNRVDDIVLFKPL 776
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ ++ K+ L KD+ RL +R + L +T A + + YDP++GARP++R+L+ +
Sbjct: 777 TVGEIEKIIDLLTKDLTRRLKDRRIELELTGQAREFIARAGYDPVFGARPLKRFLQHNLE 836
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKN 853
T + R L+ +I + ST+ +D ++ + V +N
Sbjct: 837 TRIGRALIAGDIPDGSTIRVDIQDGDLSVTHTVNEN 872
>gi|229095757|ref|ZP_04226736.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-29]
gi|423443959|ref|ZP_17420865.1| chaperone ClpB [Bacillus cereus BAG4X2-1]
gi|423445785|ref|ZP_17422664.1| chaperone ClpB [Bacillus cereus BAG5O-1]
gi|423467051|ref|ZP_17443819.1| chaperone ClpB [Bacillus cereus BAG6O-1]
gi|423536448|ref|ZP_17512866.1| chaperone ClpB [Bacillus cereus HuB2-9]
gi|423538307|ref|ZP_17514698.1| chaperone ClpB [Bacillus cereus HuB4-10]
gi|423544531|ref|ZP_17520889.1| chaperone ClpB [Bacillus cereus HuB5-5]
gi|423625749|ref|ZP_17601527.1| chaperone ClpB [Bacillus cereus VD148]
gi|228687590|gb|EEL41489.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-29]
gi|401132878|gb|EJQ40511.1| chaperone ClpB [Bacillus cereus BAG5O-1]
gi|401177950|gb|EJQ85136.1| chaperone ClpB [Bacillus cereus HuB4-10]
gi|401184061|gb|EJQ91170.1| chaperone ClpB [Bacillus cereus HuB5-5]
gi|401253493|gb|EJR59730.1| chaperone ClpB [Bacillus cereus VD148]
gi|402412091|gb|EJV44453.1| chaperone ClpB [Bacillus cereus BAG4X2-1]
gi|402414855|gb|EJV47182.1| chaperone ClpB [Bacillus cereus BAG6O-1]
gi|402460884|gb|EJV92599.1| chaperone ClpB [Bacillus cereus HuB2-9]
Length = 866
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/874 (51%), Positives = 625/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPA---STTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E V +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQDVENV----IKKKPSVTGSGAEVGKLYITSNLQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINHLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMSAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEADGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TD+A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDSAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|399888832|ref|ZP_10774709.1| clpb protein [Clostridium arbusti SL206]
Length = 867
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/867 (50%), Positives = 612/867 (70%), Gaps = 25/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
MN ++ T K EAI + +A H +HL +AL+S G+ + G EN
Sbjct: 1 MNVERLTTKVKEAINDSQLVAVKFNHQTIDSIHLFMALVSQEDGLIPNIFSKMGVDIENL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ E ++ M K+ + + A+ ++ +A+ K D++++ + +++ L+
Sbjct: 61 KKDIENELDR-MPKVLGEAAQNSSVYATRRFEEIFIKAEGISKDFKDSYISSEHVMIALM 119
Query: 119 E---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
+ + + + K + + ++RG ++VE+ + T+ AL YGR+LVE+A
Sbjct: 120 DLDKNDIVVTILKRHNIQKKEFLQTLAQIRG--NQRVETEDPEGTYDALSKYGRNLVEEA 177
Query: 176 GK--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
K LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTA+VEGLA+RI+RGD+P L
Sbjct: 178 KKHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIIRGDIPDGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ + +LDMG+L+AGAKYRGEFEERLKAVLKEV+ +EGK+ILFIDEIH ++GAG+TEG+
Sbjct: 238 KNRIIFSLDMGSLIAGAKYRGEFEERLKAVLKEVQNSEGKIILFIDEIHTIVGAGKTEGA 297
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KP+LARG+L CIGATT +EYRKY+EKD A ERRFQ V V+EP+V D++SILRG
Sbjct: 298 MDAGNLIKPLLARGELHCIGATTFDEYRKYIEKDKALERRFQPVIVSEPTVEDSISILRG 357
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE++E HHGV I D A++ AA+LS RYIT R LPDKAIDLVDEA A +R ++DS P E+
Sbjct: 358 LKERFEIHHGVTIHDSAIIAAAKLSDRYITDRFLPDKAIDLVDEAGAMIRTEIDSMPTEM 417
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L+RK Q+EIE AL KEKD+A+K RL + +EL +L++K + + +Y+ EK +I E+
Sbjct: 418 DMLKRKIFQMEIEKEALSKEKDEATKERLKVLEEELSNLKEKDKEMTSKYENEKSQITEV 477
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG--NQSDENLMLTET 531
+ LK K +E+ +++AER YDL +AA+L+YG + +E I + E EN +L E
Sbjct: 478 KELKTKLDEVRGQIEKAEREYDLNKAAELKYGTVPNLEKEISEKEALIKGKTENAILKEE 537
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAG 580
V ++I+E+VS+WTGIPV+RL + E K+R+IG EAV AVA +V+R+RAG
Sbjct: 538 VTEEEISEIVSKWTGIPVSRLVEGERKKLLRLEDELKKRVIGQDEAVRAVANAVIRARAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L ++P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME++SVSRLIGAP
Sbjct: 598 LKDIKKPIGSFIFLGPTGVGKTELAKTLARTLFDTEENIIRIDMSEYMEKYSVSRLIGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF+
Sbjct: 658 PGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKTVDFK 717
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
N +IIMTSN+G+ HLLS + + V+ E++ F+PE LNRLD+I++F PLS
Sbjct: 718 NCIIIMTSNIGSSHLLSNTKENGIDENVKKYVMDEMKSRFKPEFLNRLDDIIMFKPLSTS 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++ K+ + + D+ RL E+ + L +T+ A ++ E YDP+YGARP++R++E + T++
Sbjct: 778 EITKIIDIFIDDIRKRLNEKNIKLVITEEAEKLMAREGYDPVYGARPLKRYIENTLETDI 837
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLV 847
+R ++ EI E +TV +D KGDN+V
Sbjct: 838 ARKIIAGEIYEGTTVKVDG--KGDNIV 862
>gi|261419034|ref|YP_003252716.1| ATP-dependent chaperone ClpB [Geobacillus sp. Y412MC61]
gi|319765851|ref|YP_004131352.1| ATP-dependent chaperone ClpB [Geobacillus sp. Y412MC52]
gi|261375491|gb|ACX78234.1| ATP-dependent chaperone ClpB [Geobacillus sp. Y412MC61]
gi|317110717|gb|ADU93209.1| ATP-dependent chaperone ClpB [Geobacillus sp. Y412MC52]
Length = 864
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/854 (53%), Positives = 617/854 (72%), Gaps = 21/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ + T K EA+ A LA H Q HL +ALL G+ + + +G + +
Sbjct: 1 MDASRLTEKLQEALMAAQSLAKERHHQQLDVEHLLIALLEQEGGLAPRLVELSGADKE-K 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
A+ + +Q +++ P A +++ + L +++ A+ K D +++V+ ++L L
Sbjct: 60 VADWLRSQ-LRQKPEVHGADEQLYVAPALARLLEEAENEAKRMQDEYISVEHVLLALPHG 118
Query: 121 SQ-IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
++ + G+ + + V K+RG + +V S + T++AL YGRDLV +A GK
Sbjct: 119 AEPVARQLASFGLTKEALLAAVRKVRGNQ--RVTSPHPEATYEALAKYGRDLVAEAKAGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DPVIGRD EIRR++RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L D
Sbjct: 177 IDPVIGRDSEIRRIIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLKDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+ ALDM ALVAGAK+RGEFEERLKAVL E+++++G++ILFIDE+H ++GAGR EG++DA
Sbjct: 237 IFALDMSALVAGAKFRGEFEERLKAVLNEIKKSDGRIILFIDELHTIVGAGRAEGAIDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPMLARG+LRCIGATTL+EYR+Y+EKD A ERRFQQV V EPSV DT+SILRGLKE+
Sbjct: 297 NMLKPMLARGELRCIGATTLDEYRQYIEKDPALERRFQQVLVQEPSVEDTISILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGV+I DRALV AA LS RYI+ R LPDKAIDLVDEACA +R +++S P E+D +
Sbjct: 357 YEVHHGVKIHDRALVAAAVLSDRYISDRFLPDKAIDLVDEACATIRTEMESMPSELDEVM 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ MQLEIE AL KE D+AS+ RLV ++KEL DLR+K + +++KEKE +D +RRL+
Sbjct: 417 RRVMQLEIEEAALSKETDEASRERLVALQKELADLREKANAMKAQWQKEKEALDRVRRLR 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD--ENLMLTETVGPD 535
+ E L+EAE YDL +AA+LR+G I ++E + QLE S+ E +L E V +
Sbjct: 477 EALERAKRELEEAENEYDLNKAAELRHGRIPQLEKQLKQLEQEISEQSEGKLLREEVTEE 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKER-----------LIGLAEAVNAVAESVLRSRAGLGRP 584
+IAE+VSRWTGIP+TRL + E+E+ +IG EAV VA++VLR+RAG+ P
Sbjct: 537 EIAEIVSRWTGIPLTRLVEGEREKLLRLHELLHRRVIGQDEAVELVADAVLRARAGMKDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALAE LFD E L+R+DMSEYME+H+VSRLIGAPPGYV
Sbjct: 597 NRPIGSFLFLGPTGVGKTELAKALAEALFDSEEQLIRLDMSEYMEKHAVSRLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGRLTD QGRTVDF+NTV+
Sbjct: 657 GYEEGGQLTEAVRRKPYSVLLFDEIEKAHPEVFNILLQLLDDGRLTDSQGRTVDFKNTVV 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSN+G+ LL G + + + QV ++R HFRPE LNR+D+IV+F PLS +++
Sbjct: 717 IMTSNIGSPLLLENKQGDIDEETHK-QVFDQLRAHFRPEFLNRIDDIVLFKPLSMNEVKG 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ ++++ RLA+R + L +T+AA + +DP+YGARP++R+++K++ T L++ L
Sbjct: 776 IVEKFARELSARLADRHIELVLTEAAKQYIAEAGFDPVYGARPLKRFMQKQIETPLAKEL 835
Query: 825 VREEIDENSTVYID 838
+ + + STV +D
Sbjct: 836 IAGRVKDYSTVTVD 849
>gi|297530994|ref|YP_003672269.1| ATP-dependent chaperone ClpB [Geobacillus sp. C56-T3]
gi|297254246|gb|ADI27692.1| ATP-dependent chaperone ClpB [Geobacillus sp. C56-T3]
Length = 864
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/854 (53%), Positives = 616/854 (72%), Gaps = 21/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ + T K EA+ A LA H Q HL +ALL G+ + + +G + +
Sbjct: 1 MDASRLTEKLQEALMAAQSLAKERHHQQLDVEHLLIALLEQEGGLAPRLVELSGADKE-K 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
A+ + +Q +++ P A +++ + L +++ A+ K D +++V+ ++L L
Sbjct: 60 VADWLRSQ-LRQKPEVHGADEQLYVAPALARLLEEAENEAKRMQDEYISVEHVLLALPHG 118
Query: 121 SQ-IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
++ + G+ + + V K+RG + +V S + T++AL YGRDLV +A GK
Sbjct: 119 AEPVARQLASFGLTKEALLAAVRKVRGNQ--RVTSPHPEATYEALAKYGRDLVAEAKAGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DPVIGRD EIRR++RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L D
Sbjct: 177 IDPVIGRDSEIRRIIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLKDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+ ALDM ALVAGAK+RGEFEERLKAVL E+++++G++ILFIDE+H ++GAGR EG++DA
Sbjct: 237 IFALDMSALVAGAKFRGEFEERLKAVLNEIKKSDGRIILFIDELHTIVGAGRAEGAIDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPMLARG+LRCIGATTL+EYR+Y+EKD A ERRFQQV V EPSV DT+SILRGLKE+
Sbjct: 297 NMLKPMLARGELRCIGATTLDEYRQYIEKDPALERRFQQVLVQEPSVEDTISILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGV+I DRALV AA LS RYI+ R LPDKAIDLVDEACA +R +++S P E+D +
Sbjct: 357 YEVHHGVKIHDRALVAAAVLSDRYISDRFLPDKAIDLVDEACATIRTEMESMPSELDEVM 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ MQLEIE AL KE D+AS+ RL ++KEL DLR+K + +++KEKE +D +RRL+
Sbjct: 417 RRVMQLEIEEAALSKETDEASRERLAALQKELADLREKANAMKAQWQKEKEALDRVRRLR 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD--ENLMLTETVGPD 535
+ E L+EAE YDL +AA+LR+G I ++E + QLE S+ E +L E V +
Sbjct: 477 EALERAKRELEEAENEYDLNKAAELRHGRIPQLEKQLKQLEQEISEQSEGKLLREEVTEE 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKER-----------LIGLAEAVNAVAESVLRSRAGLGRP 584
+IAE+VSRWTGIP+TRL + E+E+ +IG EAV VA++VLR+RAG+ P
Sbjct: 537 EIAEIVSRWTGIPLTRLVEGEREKLLRLHELLHRRVIGQDEAVELVADAVLRARAGMKDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALAE LFD E L+R+DMSEYME+H+VSRLIGAPPGYV
Sbjct: 597 NRPIGSFLFLGPTGVGKTELAKALAEALFDSEEQLIRLDMSEYMEKHAVSRLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGRLTD QGRTVDF+NTV+
Sbjct: 657 GYEEGGQLTEAVRRKPYSVLLFDEIEKAHPEVFNILLQLLDDGRLTDSQGRTVDFKNTVV 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSN+G+ LL G + + R QV ++R HFRPE LNR+D+IV+F PLS +++
Sbjct: 717 IMTSNIGSPLLLENKQGDIDEET-RKQVFDQLRAHFRPEFLNRIDDIVLFKPLSMNEVKG 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ ++++ RLA+R + L +T+AA + +DP+YGARP++R+++K++ T L++ L
Sbjct: 776 IVEKFARELSARLADRHIELVLTEAAKQYIAEAGFDPVYGARPLKRFMQKQIETPLAKEL 835
Query: 825 VREEIDENSTVYID 838
+ + + STV +D
Sbjct: 836 IAGRVKDYSTVTVD 849
>gi|296447416|ref|ZP_06889341.1| ATP-dependent chaperone ClpB [Methylosinus trichosporium OB3b]
gi|296255036|gb|EFH02138.1| ATP-dependent chaperone ClpB [Methylosinus trichosporium OB3b]
Length = 871
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/865 (53%), Positives = 605/865 (69%), Gaps = 29/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK+T + + A LAT G+ Q P H+ LL D G+ A I+ AGG +
Sbjct: 1 MNFDKYTTRAQGFVQAALSLATREGNPQLQPEHVLKVLLDDEQGLSAGLIDRAGGRSREA 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIP--ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILG-- 116
A+ A+ KLP + P A T + AQKA GD+++ V++L+L
Sbjct: 61 LAKT--EAALAKLPKVSGGGAGQPQLAQATARLFDNAEKIAQKA-GDSYVTVERLLLAIA 117
Query: 117 LLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
L + ++ + E+GV + + +E LR +GR +S+S ++ + ALK Y RDL E A
Sbjct: 118 LEKGTEAARILSESGVTPQTLSATIEDLR--KGRTADSSSAESAYDALKKYARDLTEAAR 175
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L
Sbjct: 176 EGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLE 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +L+ALDMGAL+AGAKYRGEFEERLKAVL E+ A+G +ILFIDE+H ++GAG+ +G+M
Sbjct: 236 DKKLLALDMGALIAGAKYRGEFEERLKAVLSEITAAQGGIILFIDEMHTLVGAGKADGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V EP+V DT+SILRGL
Sbjct: 296 DASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVNEPTVEDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KEKYE HHGVR+ D A+V AA LS RYI+ R LPDKAIDLVDEA + +R+Q+DS+PEE+D
Sbjct: 356 KEKYEMHHGVRVTDGAIVAAATLSNRYISDRFLPDKAIDLVDEAGSRLRMQIDSKPEELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L+R+ +QL IE AL KE D ASK RL ++ EL +L +K L R+K EK+++ + +
Sbjct: 416 ELDRRIIQLRIEQEALRKETDAASKDRLAKLETELAELSEKSAALTQRWKSEKDKLGQAQ 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVE--AAIGQLEGNQSDENLMLTETV 532
+ K++ E L +A+RR + RA +L YG I ++E A + EG Q ML E V
Sbjct: 476 KYKEQLETARNELAQAQRRGEFQRAGELTYGVIPDLERKLASSEKEGAQK----MLEEEV 531
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
P+ +A+VVSRWTGIPV ++ + E+E+L +G EAV AV+ +V R+RAGL
Sbjct: 532 TPEHVAQVVSRWTGIPVDKMLEGEREKLLLMEDELARRVVGQKEAVAAVSTAVRRARAGL 591
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTEL KALA LFDDE +VR+DMSEYME+HSV+RLIGAPP
Sbjct: 592 QDPNRPIGSFIFLGPTGVGKTELTKALASFLFDDETAMVRLDMSEYMEKHSVARLIGAPP 651
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+N
Sbjct: 652 GYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKN 711
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+IIMTSNLG+E L+ G+ + V D+V+Q VR HFRPE LNR+DEIV+F L E
Sbjct: 712 TLIIMTSNLGSEFLVMQQEGEDSTAV-HDEVMQVVRAHFRPEFLNRVDEIVLFHRLRRED 770
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + +Q++ + L +R + L + + A ++ A+ YDP YGARP++R ++K++ L+
Sbjct: 771 MGAIVDIQLERLQKLLDDRKIVLQLDEKARAVLAAKGYDPAYGARPLKRVIQKELQDPLA 830
Query: 822 RMLVREEIDENSTVYIDASPKGDNL 846
L+ +I + STV + +G L
Sbjct: 831 EALLAGDIVDGSTVRVSTDSQGLTL 855
>gi|357115924|ref|XP_003559735.1| PREDICTED: chaperone protein ClpB2, chloroplastic-like
[Brachypodium distachyon]
Length = 918
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/878 (51%), Positives = 610/878 (69%), Gaps = 40/878 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT ++I +A E+A + H HL +LL +G+ + AG +N +
Sbjct: 28 EFTEMAWQSIVLAPEVAKESKHQIVETEHLMKSLLEQRNGLARRIFLKAGVDNT-----K 82
Query: 65 VFNQAMKKLPSQTPAPDEIPASTT---LIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ + K + Q E P S L +I+RA+ +K +GD+ ++V+ L+LG +D
Sbjct: 83 LLDATEKYIQRQPKVLGEDPGSMLGRDLEALIQRARDFKKEYGDSFVSVEHLVLGFADDK 142
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LFK+ + V +KS +E +RGK+ + G ++AL YG+DL A GKL
Sbjct: 143 RFGRQLFKDFLITVKTLKSAIESIRGKQNVIDQDPEG--KYEALDKYGKDLTAMARQGKL 200
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L + RL
Sbjct: 201 DPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPQALTNRRL 260
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I LDMGAL+AGAKYRGEFE+RLKAVLKEV +++G+VILFIDEIH V+GAG T G+MDA N
Sbjct: 261 ITLDMGALIAGAKYRGEFEDRLKAVLKEVIDSDGQVILFIDEIHTVVGAGATSGAMDAGN 320
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +PSV DTVSILRGL+E+Y
Sbjct: 321 LLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTVSILRGLRERY 380
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDE+ A +++++ S+P +D ++R
Sbjct: 381 ELHHGVRISDSALVAAAVLSDRYISGRFLPDKAIDLVDESAAKLKMEITSKPTALDEIDR 440
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
++LE+E +L + DKASK RL + EL L+++ L +++ EK + +I+ +K+
Sbjct: 441 SVLKLEMERLSLTNDTDKASKDRLSRIEAELSLLKERQNKLTEQWEHEKSVMTKIQSIKE 500
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + L +Q+AER YDL RAA+L+YG++ ++++ +L QS ML E V
Sbjct: 501 EIDRLNVEIQQAEREYDLNRAAELKYGSLNALQRQLQTTENELNEYQSSGKSMLREEVSQ 560
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGR 583
D IAE+VSRWTGIPV++L Q+++E+L+ L + AV AVAE++ RSRAGL
Sbjct: 561 DDIAEIVSRWTGIPVSKLKQSDREKLLYLEDELHKRVVGQDPAVKAVAEAIQRSRAGLSD 620
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+F+GPTGVGKTELAKALA +F+ E+ +VRIDMSEYME+HSVSRLIGAPPGY
Sbjct: 621 PNRPIASFMFMGPTGVGKTELAKALASFMFNTEDAVVRIDMSEYMEKHSVSRLIGAPPGY 680
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRRRPYSVVLFDE+EKAH VFN LQVLDDGR+TD QGR V F NT+
Sbjct: 681 VGYEEGGQLTEAVRRRPYSVVLFDEIEKAHSDVFNVFLQVLDDGRVTDSQGRKVSFTNTI 740
Query: 704 IIMTSNLGAEHLLS----GMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
IIMTSN+G++++L+ G + + + +V+ R FRPE +NR+DE +VF PL
Sbjct: 741 IIMTSNVGSQYILNMDEVGGATDLAYENMKKRVMDAARSVFRPEFMNRVDEYIVFKPLER 800
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
EQ+ + +LQ+ V R+A+R + L V+ A++ + + YDP YGARP++R L++ V E
Sbjct: 801 EQINSIVKLQLARVQKRIADRKIKLEVSPGAIEFLGSLGYDPNYGARPVKRVLQQYVENE 860
Query: 820 LSRMLVREEIDENSTVYIDAS---PKG-----DNLVYR 849
L++ ++R E + ++ +D P NLV+R
Sbjct: 861 LAKGILRGEFKDEDSILVDTQVTVPSNGQLPQQNLVFR 898
>gi|336113490|ref|YP_004568257.1| ATP-dependent chaperone ClpB [Bacillus coagulans 2-6]
gi|335366920|gb|AEH52871.1| ATP-dependent chaperone ClpB [Bacillus coagulans 2-6]
Length = 860
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/858 (51%), Positives = 613/858 (71%), Gaps = 29/858 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T E +A A +LA H + HL L+ P + + N G + +
Sbjct: 1 MDINRMTFTVQEGLAEAQQLAAQKHHPELDIAHLWKTLMEKPDSLLPEIYNGLG--LSKE 58
Query: 61 SAERVFNQAMKKLPSQT--PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
++ + + K P T AP S L+++ R A+ +A D +++V+ L L ++
Sbjct: 59 EIGKIADGILAKKPEVTGQSAP---YLSAALLELFRLAEEEMRALKDEYISVEHLALAVM 115
Query: 119 EDSQIGDL--FKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--Q 174
D + DL + ++ + ++ ++ +RG KV S + + T+ LK YG DLVE +
Sbjct: 116 -DVEHDDLSRYLKSRITKQQLLQAIKNIRG--NHKVASQNPEATYNVLKKYGTDLVEAVK 172
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
AGK+DPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 173 AGKIDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 232
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + +LD+GALVAGAK+RGEFEERLKAVL+E++++ G+++LFIDE+H ++GAG+TEG+M
Sbjct: 233 DKTIFSLDLGALVAGAKFRGEFEERLKAVLQEIKKSNGQILLFIDELHTIVGAGKTEGAM 292
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL EYR+Y+EKDAA ERRFQQV V EP V DT+SILRGL
Sbjct: 293 DAGNMLKPMLARGELHCIGATTLNEYRQYIEKDAALERRFQQVLVQEPDVEDTISILRGL 352
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
+E++E HHGVRI D+ALV AA LS RYIT R LPDKAIDLVDEACAN+RV++DS P E+D
Sbjct: 353 RERFEIHHGVRIHDKALVAAATLSNRYITDRFLPDKAIDLVDEACANIRVEMDSMPTELD 412
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ MQLEIE AL+KE D+ASKARL ++KEL DL+++ + +++ EK + +++
Sbjct: 413 EVTRRVMQLEIEEAALQKETDEASKARLGILQKELADLKEEANRMRAKWQAEKAELQKVQ 472
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE---NLMLTET 531
++ E+ L+EAE RYDL +AA+LR+G I VE + QLE +++ +L E
Sbjct: 473 EKRELLEKYRRDLEEAENRYDLNKAAELRHGRIPAVEKELKQLEQQMAEKEGSGRILREE 532
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IA +V+RWTGIPV +L Q+E+E+L IG EAV V+++VLR+RAG
Sbjct: 533 VTEEEIAAIVARWTGIPVAKLVQSEREKLLKLESILHERVIGQDEAVRLVSDAVLRARAG 592
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P +P GSF+FLGPTGVGKTELAKALA+ LFD EN ++RIDMSEYME+ +VSRLIGAP
Sbjct: 593 MKDPNRPIGSFIFLGPTGVGKTELAKALAQHLFDGENHMIRIDMSEYMEKFAVSRLIGAP 652
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQVLDDGR+TD QGRTVDF+
Sbjct: 653 PGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQVLDDGRITDSQGRTVDFK 712
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT++IMTSN+G+ +LL + G+ + +++V+ ++R FRPE LNR+D+I++F PL+ E
Sbjct: 713 NTIVIMTSNIGSSYLLD-IKGEEISEETKNKVMAQLRASFRPEFLNRIDDIILFKPLTLE 771
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + M ++A RLAE+ V L ++D A + +YDP+YGARP++R+++ ++ T L
Sbjct: 772 NMMGIVDKMMHELAARLAEQSVELQLSDEAKKWIAESAYDPVYGARPLKRFIQHQIETRL 831
Query: 821 SRMLVREEIDENSTVYID 838
++ ++ ++ + TV +D
Sbjct: 832 AKEIIAGKVKPHQTVTLD 849
>gi|197103260|ref|YP_002128638.1| ATPase with chaperone activity, ATP-binding subunit
[Phenylobacterium zucineum HLK1]
gi|196480536|gb|ACG80063.1| ATPase with chaperone activity, ATP-binding subunit
[Phenylobacterium zucineum HLK1]
Length = 868
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/855 (53%), Positives = 604/855 (70%), Gaps = 26/855 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + + A +A H + P H+ ALL DP G+ A I +AGG +
Sbjct: 1 MNLEKFTDRAKGMLQAAQSVAVRHNHQRIAPEHILKALLEDPEGMAAGLIRSAGG--TPE 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPAS--TTLIKVIRRA-QAAQKAHGDTHLAVDQLILGL 117
A R + A+ KLP+ T A P I+++ +A Q AQKA GD+ + V++L+L +
Sbjct: 59 LAGREIDTALGKLPAVTGAGASQPPGLDNDAIRLLDQAEQVAQKA-GDSFVTVERLLLAM 117
Query: 118 L--EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE-- 173
S G + AGV + ++ LRG GR ++A+ + ++ALK Y RDL E
Sbjct: 118 AIATSSTAGRVLSAAGVKPEALSKAIDALRG--GRVADTATAEDRYEALKKYARDLTEAA 175
Query: 174 QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
+AGKLDPVIGRDEEIRR V+IL+RRTKNNPVLIG+PGVGKTA+VEGLA RI GDVP L
Sbjct: 176 RAGKLDPVIGRDEEIRRTVQILARRTKNNPVLIGDPGVGKTAIVEGLAIRIANGDVPDTL 235
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +L+ALDMGAL+AGAKYRGEFEERLK VL EV+ AEG +ILFIDE+H ++GAG++EG+
Sbjct: 236 RDRKLMALDMGALIAGAKYRGEFEERLKGVLDEVKGAEGGIILFIDEMHTLIGAGKSEGA 295
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KP LARG+L CIGATTL+EYRK+VEKDAA +RRFQ VYV EP+V DT+SILRG
Sbjct: 296 MDAGNLLKPALARGELHCIGATTLDEYRKHVEKDAALQRRFQPVYVDEPTVEDTISILRG 355
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKEKYE HHGVRI D A+V AA LS RYI+ R LPDKAIDL+DEA + +R++++S+PEEI
Sbjct: 356 LKEKYELHHGVRITDAAIVAAATLSHRYISDRFLPDKAIDLMDEAASRLRMEVESKPEEI 415
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
+ L+R+ +QL+IE AL+KE D ASK RL ++ KEL DL + L R++ EKE+I
Sbjct: 416 EALDRRIIQLKIEREALKKETDAASKDRLAKLEKELADLEQESASLTQRWQAEKEKIQAE 475
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVG 533
+LK++ ++ L++A+RR DL RA +L YG I ++E + E + + ML E V
Sbjct: 476 AKLKEQLDQARLELEQAQRRSDLTRAGELSYGVIPQLERQLA--EAQAASQGAMLREEVT 533
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
IA VVSRWTGIPV ++ + E+E+L IG + A++AV+++V R+RAGL
Sbjct: 534 AQDIAGVVSRWTGIPVDKMLEGEREKLIHMEEALGKRVIGQSHAISAVSKAVRRARAGLK 593
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTEL KALA LFDD+ +VRIDMSE+ME+H+V+RLIGAPPG
Sbjct: 594 DPHRPLGSFLFLGPTGVGKTELTKALAGFLFDDDTAMVRIDMSEFMEKHAVARLIGAPPG 653
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQG TVDF NT
Sbjct: 654 YVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHNDVFNVLLQVLDDGRLTDGQGHTVDFSNT 713
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+II+TSNLG+ H LS + ++ QV++ VR HFRPE LNRLDEI++F L E +
Sbjct: 714 LIILTSNLGS-HFLSNLAEGQDVESVEPQVMEVVRSHFRPEFLNRLDEIILFHRLGAEHM 772
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q++ + LA+R + L +TD A + YDP+YGARP++R +++ + L+
Sbjct: 773 GPIVDIQVERLQHLLADRKITLELTDGARGFLGRVGYDPVYGARPLKRAVQRYLQDPLAD 832
Query: 823 MLVREEIDENSTVYI 837
M+++ E+ + +TV +
Sbjct: 833 MILQGEVRDGATVRV 847
>gi|102073|pir||E35905 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpB [similarity]
- Trypanosoma brucei
Length = 862
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/864 (53%), Positives = 602/864 (69%), Gaps = 32/864 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS-AE 63
+ T+ A++ A E A + P HLA+ L + G+ ++ + N + A
Sbjct: 7 QCTNAAQTALSDAVESARKHNNGFVDPAHLALVLFKNEDGLASRVLRKL---NVLEPLAA 63
Query: 64 RVFNQAMKKLPSQTPAPDEIPASTTL-IKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ 122
RV LP Q P P I S+ RRA+A + GD+ +AVD L++GL E
Sbjct: 64 RV-----GALPEQRPRPRSITFSSDGGCAQHRRAEANRV--GDSLIAVDHLLIGLFE--- 113
Query: 123 IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDP 180
+ + K A + V+ + +LR +G+KV S + +QAL+ Y DL + A GKLDP
Sbjct: 114 VEAIMKAAHASKKAVEGALLELR--KGKKVTSEFQEENYQALEKYATDLCKLAEEGKLDP 171
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGR +E+ R +R+LSRRTKNNP+LIGEPGVGKTA+ EG+AQRIVRGDVP L + RL +
Sbjct: 172 VIGRTDEVLRTIRVLSRRTKNNPILIGEPGVGKTAIAEGIAQRIVRGDVPDTLLNTRLFS 231
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LD+GAL+AG+ RGEFEERLK+VL EV+E+ VILFIDEIHLVLGAG++ GSMDAANL
Sbjct: 232 LDLGALIAGSSLRGEFEERLKSVLNEVKESSNGVILFIDEIHLVLGAGKSGGSMDAANLL 291
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARG+LR IGATTLEEYR YVEKDAAFERRF VYV EPSV + +SILRGLK++YE
Sbjct: 292 KPMLARGELRTIGATTLEEYRTYVEKDAAFERRFMPVYVTEPSVEECISILRGLKDRYEA 351
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HHGV+I D A+VVAAQL+ RYIT R +PDKAIDL+DEACANVRVQL S+PE ID LERK+
Sbjct: 352 HHGVQITDNAVVVAAQLANRYITNRFMPDKAIDLIDEACANVRVQLSSRPEAIDILERKK 411
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
QLEIE ALE++K+ AS+ RL V+ ++ + ++LQPL+ +Y E++RIDE++ ++ +
Sbjct: 412 RQLEIEAKALERDKEAASRERLKLVKADIQRVEEELQPLVSKYNDERQRIDELQEMQSRL 471
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL-EGNQSDENLMLTETVGPDQIAE 539
+E L+ A R + AADL+Y I ++ I L E + + ++ E V +A
Sbjct: 472 DEKK-KLERAVRDGKMDLAADLQYNVIPLIQDRIRSLKEDIERQKATLVQEKVTEGDVAA 530
Query: 540 VVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPT 588
VV+RWTGIPV +L Q ++ERL+ L+ EAV VA++++R+RAGL RP PT
Sbjct: 531 VVARWTGIPVVKLSQTDRERLLNLSMHLHRRVKGQDEAVERVADAIIRARAGLSRPNSPT 590
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
SFLFLGPTGVGKTEL KA+A +LFDDE +VRIDMSEYMEQHSVSRLIGAPPGY+GH+E
Sbjct: 591 ASFLFLGPTGVGKTELVKAVAAELFDDEKHMVRIDMSEYMEQHSVSRLIGAPPGYIGHDE 650
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTE VRRRP++VVLFDEVEKAH +V+N LLQVLDDGRLTD +GRTVDF NT+I+MTS
Sbjct: 651 GGQLTEPVRRRPHAVVLFDEVEKAHPNVYNVLLQVLDDGRLTDSRGRTVDFSNTIIVMTS 710
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
NLG+EHLL+ + +V R+ VL VR +FRPEL+NRLD+IVVF L E LR V
Sbjct: 711 NLGSEHLLNPEETNESYEVLRENVLAAVRSYFRPELINRLDDIVVFRRLRTEDLRGVVDN 770
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
+ V RL G ++ + D D +L +D GARP+RRW+EK +VTE+ RML+ +E
Sbjct: 771 LIAGVNERLKSSGFSVLLDDGVKDFILEHGHDANMGARPLRRWIEKNIVTEIGRMLIAKE 830
Query: 829 IDENSTVYIDASPKGDNLVYRVQK 852
+ NST+ + G+ L + V++
Sbjct: 831 LPPNSTLRVSLPEGGNKLTFGVKR 854
>gi|254560110|ref|YP_003067205.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
gi|254267388|emb|CAX23225.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
Length = 874
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/855 (53%), Positives = 598/855 (69%), Gaps = 23/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K+T + A LA G+ Q P HL LL DP G+ A I+ AGG++
Sbjct: 1 MDFEKYTERARGFAQAAQNLAVREGNPQLAPGHLLKVLLDDPEGLCAGLIDRAGGQSRVA 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A+ Q + K P + + A+ L+++ A+ A + GD+++ V++L++
Sbjct: 61 HAQ--VEQWLAKQPKVSGNAAQPQATRELVRLFDTAEQAAEKAGDSYVTVERLLIAFAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+DS+ G + AGV A + + + LR +GR ++AS + + ALK Y RDL E A G
Sbjct: 119 KDSEAGRILSAAGVTAASLNAAINALR--KGRTADNASAENAYDALKKYARDLTEAAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L +
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKEK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
L+ALDMGAL+AGAKYRGEFEERLK VL EV AEG++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 NLLALDMGALIAGAKYRGEFEERLKGVLSEVTAAEGQIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+DN+
Sbjct: 357 KYEQHHGVRIQDSALVAAATLSNRYITDRFLPDKAIDLVDEAGSRLRMQVDSKPEELDNV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ ++L+IE AL+KE D AS+ RL + KEL DL ++ + R+K EK+++ L
Sbjct: 417 DREIVRLKIEGEALKKETDSASRDRLQRLEKELADLEEQSATITARWKAEKDKLGAAAEL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI---GQLEGNQSDENLMLTETVG 533
K+K +E L A+R+ RA +L YG I +E + + + M+ E V
Sbjct: 477 KKKLDEARNELAGAQRQGQYQRAGELAYGVIPGLEKQLAEIEAAAESAVARDGMVEEAVT 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
P IA VVSRWTG+PV ++ + E+E R++G EAV AV+ +V R+RAGL
Sbjct: 537 PAHIAAVVSRWTGVPVDKMLEGEREKLLAMEEALGKRVVGQREAVEAVSTAVRRARAGLQ 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTEL KALA LFDD+ LVRIDMSEYME+H+V+RLIGAPPG
Sbjct: 597 DPNRPIGSFMFLGPTGVGKTELTKALAGFLFDDDTALVRIDMSEYMEKHAVARLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 657 YVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++IMTSNLGAE+L++ G+ T V RD+V+ VR HFRPE LNR+DEI++F L+ ++
Sbjct: 717 LLIMTSNLGAEYLVNQPAGQDTDAV-RDEVMGVVRGHFRPEFLNRVDEIILFHRLARSEM 775
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ +A L +R + L V +AA + + YDP YGARP++R ++K V L+
Sbjct: 776 GAIVDIQLGRLAKLLEDRKITLDVDEAARTWLADKGYDPAYGARPLKRVIQKNVQDPLAE 835
Query: 823 MLVREEIDENSTVYI 837
++ I + TV I
Sbjct: 836 AILSGVIHDGETVAI 850
>gi|54035803|sp|Q7U637.2|CLPB1_SYNPX RecName: Full=Chaperone protein ClpB 1
Length = 862
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/860 (51%), Positives = 614/860 (71%), Gaps = 27/860 (3%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENA 58
M P ++FT + AI A +LA ++ H Q HL +ALL +G+ + ++ G +
Sbjct: 1 MQPTAEQFTEQAWAAIVAAQQLAQASRHQQLETEHLLLALLRQ-NGLAGRILSKTGVD-- 57
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ E +++LPS APD + +L K + RA+ + GD+ +A++ L+L L
Sbjct: 58 VTTFEASVEGHLQRLPSLGSAPDSVFLGRSLNKALDRAEQRRDGFGDSFIAIEHLLLALA 117
Query: 119 EDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
ED + G L +AGV +K + +RG + V + + T+++L YGRDL A
Sbjct: 118 EDDRCGRQLLSQAGVTTNTLKEAITAVRGNQ--TVTDQNPEATYESLAKYGRDLTAAARD 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
G+LDPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 176 GQLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPQALQN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LI LDMGAL+AGAKYRGEFEERLKAVLKEV ++G+++LFIDEIH V+GAG + G+MD
Sbjct: 236 RQLITLDMGALIAGAKYRGEFEERLKAVLKEVTTSDGQIVLFIDEIHTVVGAGASGGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KPMLARG+LRCIGATTL+E+R+++EKD A ERRFQQV V +P+VPDT+SILRGLK
Sbjct: 296 ASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVPDTISILRGLK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV AA LS+RYIT R LPDKAIDLVDE+ A +++++ S+PE+ID
Sbjct: 356 ERYEVHHGVRIADSALVAAAMLSSRYITDRFLPDKAIDLVDESAARLKMEITSKPEQIDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +L +E D AS+ RL + +EL +L ++ L +++ EK ID++
Sbjct: 416 IDRKILQLEMEKLSLGRESDSASQERLQRIERELAELGEQQSSLNAQWQSEKGAIDQLSA 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN----LMLTET 531
LK++ E + +++A+R YDL +AA+L YG + ++ + + E DE+ +L E
Sbjct: 476 LKEEIERVQLQVEQAKRNYDLNKAAELEYGTLATLQRQLQEQEDLLEDEDGTDKTLLREE 535
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
V D IAEV+++WTGIPV RL Q+E E R+IG +AV AVA+++ RSRAG
Sbjct: 536 VTEDDIAEVIAKWTGIPVARLVQSEMEKLLQLEDDLHQRVIGQNQAVTAVADAIQRSRAG 595
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P SFLFLGPTGVGKTEL+KALA +LFD ++ +VRIDMSEYME+H+VSRLIGAP
Sbjct: 596 LSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDDAMVRIDMSEYMEKHTVSRLIGAP 655
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+E GGQLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTVDF
Sbjct: 656 PGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFT 715
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQE-VRKHFRPELLNRLDEIVVFDPLSH 759
NTV+I+TSN+G++ +L + G A +Q + E ++ FRPE LNRLD+ ++F L
Sbjct: 716 NTVLILTSNIGSQSILE-LAGDPEQHTAMEQRVNEALKAKFRPEFLNRLDDQIIFRSLEK 774
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E+LR++ LQ++ + RL +R + L ++D A D + +DP+YGARP++R +++++ T
Sbjct: 775 EELRRIVSLQVERLRSRLEQRKLDLQLSDIAADWLATIGFDPVYGARPLKRAIQRELETP 834
Query: 820 LSRMLVREEIDENSTVYIDA 839
+++ ++ ++ E TV +DA
Sbjct: 835 IAKAILAGQLSEGQTVQVDA 854
>gi|210620978|ref|ZP_03292363.1| hypothetical protein CLOHIR_00306 [Clostridium hiranonis DSM 13275]
gi|210154962|gb|EEA85968.1| hypothetical protein CLOHIR_00306 [Clostridium hiranonis DSM 13275]
Length = 864
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/873 (50%), Positives = 617/873 (70%), Gaps = 31/873 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T + +++ A + A + Q +HL AL++ G+ I G +
Sbjct: 1 MDVEKMTVRVQKSLNEAFQEAVRHNNQQVDTIHLFSALMNQEDGLIPNIIEKMG--ISPD 58
Query: 61 SAERVFNQAMKKLPS---QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S R + ++P + + A+ + +V+ +A+ K D++++V+ ++L +
Sbjct: 59 SVRRSVENELDRIPKVYGEGAQSQGVTATRRINEVLLKAEEISKDFKDSYISVEHVMLAI 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
+E ++ G + K+ G+ + ++RG + +V++ + T+ AL YG +LVE
Sbjct: 119 IELEKNTATGKILKDFGITKDAFLGVLHQVRGNQ--RVDTQDPEGTYDALAKYGTNLVEL 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A KLDPVIGRD+EIRRV+RILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP
Sbjct: 177 AKKNKLDPVIGRDDEIRRVIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + +LDMGAL+AGAKYRGEFEERLKAVLKEV+ ++GK+ILFIDEIH ++GAG+TEG
Sbjct: 237 LKDKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQGSDGKIILFIDEIHNIVGAGKTEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA NL KPMLARG+L CIGATT +EYRKY+EKD A ERRFQ V EPSV DT+SILR
Sbjct: 297 SMDAGNLIKPMLARGELNCIGATTFDEYRKYIEKDKALERRFQTVIAEEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHG+RI D A+V AA+LS RYI+ R+LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLKERFEIHHGIRIHDNAIVAAAKLSDRYISDRYLPDKAIDLIDEASAMIRSEIDSLPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D++ RK LE E AL KE D SKARL+++++E+ +L+ + +Y KEK I E
Sbjct: 417 LDSIRRKLFTLETEREALLKEDDDKSKARLIDIQREIAELKSMNDEMTAKYDKEKSYITE 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG--NQSDENLMLTE 530
I+ LK + ++ +++ ER YD +AA+++Y I +E AI + E + E +L E
Sbjct: 477 IKNLKSQLDDARGRVEKYEREYDYNKAAEVKYSEIPHLEEAIKEKEERMKNASETPLLKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V D+I+E+VS+WTGIPVT+L + E+E+L IG +AV AV+++V+R+RA
Sbjct: 537 DVTEDEISEIVSKWTGIPVTKLLEGEREKLLKLEDELHKRVIGQDKAVTAVSDAVIRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL +P GSF+FLGPTGVGKTELAK LA LFD E+ ++RIDMSEYME+HSVSRL+G
Sbjct: 597 GLKDENKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIIRIDMSEYMEKHSVSRLVGP 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHEDVFNIFLQILDDGRLTDNKGKTVDF 716
Query: 700 RNTVIIMTSNLGAEHLL-SGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NT+IIMTSN+G+++LL SG G +T +V D V+ E++ F+PE LNR+D+I++F PL+
Sbjct: 717 KNTIIIMTSNIGSQYLLESG--GNITEEV-NDVVMSEMKHRFKPEFLNRVDDIIMFTPLN 773
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
E+++++ + M+ + RLA+R + + +TDAA ++++ E YDP+YGARP++R++ + T
Sbjct: 774 REEIKQIIDIFMQGLRNRLADREIKIELTDAAKEVMINEGYDPVYGARPLKRYISGTLET 833
Query: 819 ELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
L++ L+ EI STV ID S GDN+ V+
Sbjct: 834 MLAKKLISGEIYNGSTVVIDGS--GDNINITVK 864
>gi|239916624|ref|YP_002956182.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|281414926|ref|ZP_06246668.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|239837831|gb|ACS29628.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
Length = 875
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/870 (53%), Positives = 607/870 (69%), Gaps = 25/870 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ + T K+ EA+ A LA AG + HL +ALL G+ + + AG + A
Sbjct: 1 MDMNSLTQKSQEALTSAQSLAVQAGQVETDEEHLLLALLQQEEGLVPRLLQAAGADVEAV 60
Query: 61 SAERVFNQAMK-KLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
A+ A K + +P ++ S +L + RA+ K D++++V+ L+L L++
Sbjct: 61 RADVEAEIARKPSVSGSSPQTGQVYVSRSLTSTLERAEREAKRLKDSYISVEHLVLALVD 120
Query: 120 DSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
DS + + GV S + ++RG + V SA+ + T++AL YGRDLV A
Sbjct: 121 DSSNRPASRVLRGHGVTRESFLSALTEIRGNQ--HVNSATPEQTYEALAKYGRDLVADAR 178
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD EIRRV++ILSR+TKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP L
Sbjct: 179 LGKLDPVIGRDAEIRRVIQILSRKTKNNPVLIGEPGVGKTAIVEGLAQRILSEDVPEGLR 238
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + +LD+ ALVAGAKYRGEFEER+KAVL EV+ AEG+++LFIDE+H ++GAG TEG+M
Sbjct: 239 DKTVFSLDLSALVAGAKYRGEFEERMKAVLAEVKAAEGRILLFIDELHTLVGAGATEGAM 298
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L IGATTL+EYRK++EKDAA ERRFQ V V EP V D +SILRGL
Sbjct: 299 DAGNMLKPMLARGELHLIGATTLDEYRKHIEKDAALERRFQTVMVEEPDVEDAISILRGL 358
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
+E+ E HGVRIQD ALV AA LS RYIT R LPDKAIDL+DEACA +R ++DS P E+D
Sbjct: 359 RERLEVFHGVRIQDSALVAAAVLSHRYITDRFLPDKAIDLIDEACARLRTEIDSMPAELD 418
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L R+ +LEIE AL KE D ASK RL E+R+EL DL+ + +++ E++ I +++
Sbjct: 419 ELTRRVTRLEIEEAALSKETDTASKNRLEELRRELADLKAEADSKRAQWEAERQAIRKVQ 478
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE---NLMLTET 531
L+ + E L +EAER YDL RAA+LRYGAI + E + E + + +L E
Sbjct: 479 ELRSELERLRREAEEAERSYDLNRAAELRYGAIADAERRLRAEEERLTSKQGGQRLLREV 538
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAG 580
V D+IAE+V+ WTGIPV RL + E KER++G EA+ V+++++R+R+G
Sbjct: 539 VTEDEIAEIVAAWTGIPVARLQEGERNKILTLDATLKERVVGQDEAITLVSDAIIRARSG 598
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P++P GSF+FLGPTGVGKTELAKALAE LFD E+ ++R+DMSEY E+H+VSRL+GAP
Sbjct: 599 IRDPRRPIGSFIFLGPTGVGKTELAKALAEALFDSESAMIRLDMSEYQERHTVSRLVGAP 658
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRRRPYSVVL DE+EKAH VFNTLLQVLDDGR+TD QGRTVDFR
Sbjct: 659 PGYVGYEEGGQLTEAVRRRPYSVVLLDEIEKAHPDVFNTLLQVLDDGRITDSQGRTVDFR 718
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSN+GA HLL G + V RD VL E+R HFRPE LNR+D+IVVF PL E
Sbjct: 719 NTIIIMTSNIGAHHLLGSDGGAIPDDV-RDSVLGELRAHFRPEFLNRVDDIVVFSPLGRE 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q++ + LQ D+ RLAER + + +T AA ++ YDP+YGARP+RR++ ++ T L
Sbjct: 778 QIQDIVELQFTDLRSRLAERQIRIELTPAARQLIADRGYDPVYGARPLRRYISHEIETRL 837
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYRV 850
R L+ ++ + STV +D GD LV+ +
Sbjct: 838 GRALLSGQVMDGSTVTLDVQ-DGD-LVFNI 865
>gi|145226771|gb|ABP48137.1| putative ATP-dependent Clp protease [Rhodococcus sp. DK17]
Length = 877
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/862 (53%), Positives = 602/862 (69%), Gaps = 29/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
M+ T K+ EA+ A +AT GH + HL +AL+ G+ + + AG A
Sbjct: 1 MDTGSLTEKSREALQEAQNVATRMGHTEVDGEHLLLALVDQQEGLVPRLLEQAGANVDAL 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
ER ++ K+ P ++ + L K++ A+ K D++++V+ L++ L
Sbjct: 61 RSDLERELSR-RPKVSGPGATPGQVMITQRLAKLLDAAEREAKRLKDSYVSVEHLVMALS 119
Query: 119 ED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ- 174
E+ S G + GV + + K+RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 120 EEGSASAAGRVLASHGVTREAFLTALTKVRGNQ--RVTSATPEGAYEALEKYGRDLVSEG 177
Query: 175 -AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
AGKLDPVIGRD EIRRV +ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP L
Sbjct: 178 RAGKLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT--E 291
D + +LDMG+LVAGAKYRGEFEERL+AVL EV+ AEG+++LF+DE+H V+GAG E
Sbjct: 238 RDKTIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGRILLFVDELHTVVGAGSVGGE 297
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
GS+DA N+ KPMLARG+L IGATTL+EYRK++E DAA ERRFQ V V EPS D +SIL
Sbjct: 298 GSLDAGNMLKPMLARGELHMIGATTLDEYRKHIESDAALERRFQTVLVDEPSAEDAISIL 357
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RGL+E+ E HGV+IQD ALV A LS RYIT R LPDKAIDLVDEACA +R ++DS P
Sbjct: 358 RGLRERLEVFHGVKIQDGALVAAVTLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPA 417
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
E+D L RK +LEIE AL KE D ASKARL E+RKEL DLR + +++ E++ I
Sbjct: 418 ELDELTRKVTRLEIEEAALSKETDAASKARLEELRKELADLRAEADARHAQWEAERQAIR 477
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLM 527
++ L+ + E L +EAER YDL RAA+LRYG I E +EAA QL Q N +
Sbjct: 478 RVQELRGELERLRHEAEEAERNYDLNRAAELRYGEITELERRLEAAEEQLATRQG-RNPL 536
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLR 576
L E V D+IAE+V+ WTGIPV RL + E+ ER++G EAV VA++V+R
Sbjct: 537 LREVVTEDEIAEIVAAWTGIPVARLQEGEREKLLKLDEILHERVVGQDEAVQLVADAVIR 596
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
+R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E+ +VR+DMSEY E+H+VSRL
Sbjct: 597 ARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQERHTVSRL 656
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
IGAPPGYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQVLDDGR+TD QGR
Sbjct: 657 IGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQ 716
Query: 697 VDFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFD 755
VDFRNTVIIMTSN+G++HLL G+ ++ ARD VL E+R HFRPE LNR+D+IV+F
Sbjct: 717 VDFRNTVIIMTSNIGSQHLLEGVTADGEIKPDARDWVLAELRGHFRPEFLNRVDDIVLFT 776
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PL+ Q+ + LQ+ D+ RL+ER + L +T A ++ +DP+YGARP+RR++ +
Sbjct: 777 PLTLPQIEHIVELQLTDLRNRLSERQIHLDITPEARRLIAEHGFDPVYGARPLRRYIAHE 836
Query: 816 VVTELSRMLVREEIDENSTVYI 837
V T++ R L+R EI+ T+ +
Sbjct: 837 VETKIGRALLRGEIEPGGTISV 858
>gi|118470039|ref|YP_885138.1| chaperone ClpB [Mycobacterium smegmatis str. MC2 155]
gi|399985143|ref|YP_006565491.1| Chaperone protein clpB [Mycobacterium smegmatis str. MC2 155]
gi|118171326|gb|ABK72222.1| chaperone ClpB [Mycobacterium smegmatis str. MC2 155]
gi|399229703|gb|AFP37196.1| Chaperone protein clpB [Mycobacterium smegmatis str. MC2 155]
Length = 848
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/863 (53%), Positives = 605/863 (70%), Gaps = 36/863 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + A+SAG+ + P HL +ALL+ GI A + G E A
Sbjct: 4 FNP---TTKTQAALTSALQAASSAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATI 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
E + + +LPS + A + S + I AQ D +++ + L++GL
Sbjct: 61 RTET--QRLLDRLPSASGASSQPQLSRESLAAITTAQNLATEMDDEYVSTEHLMVGLATG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
DS++ L G + ++ K+RG +V S + T+QAL+ Y DL +A GK
Sbjct: 119 DSEVAKLLTGHGASPQALREAFVKVRGSA--RVTSPDPEGTYQALEKYSTDLTARAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+IALD+G++VAGAKYRGEFEERLKAVL +++ + G+VI FIDE+H ++GAG T E +MDA
Sbjct: 237 VIALDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV+V EPSV DTV ILRGLK+
Sbjct: 297 GNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDTVGILRGLKD 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+P EID +
Sbjct: 357 RYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE ALEKE+D+ASK RL ++R EL D ++KL L R++ EK I+ +R L
Sbjct: 417 ERLVRRLEIEEMALEKEEDEASKDRLEKLRAELADHKEKLSELTTRWQNEKNAINVVREL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLEGNQSDENLMLTETVGPD 535
K++ + L AER DLA+AA+LRYG I EVE + L ++ ENLML E VGPD
Sbjct: 477 KEQLDTLRGEADRAERDGDLAKAAELRYGRIPEVEKKLDAALPAAEARENLMLKEEVGPD 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
IAEVV WTGIP R+ + E +R++G +AV AV+++V RSRAG+ P
Sbjct: 537 DIAEVVEAWTGIPSGRMLEGETAKLLRMEEELGKRVVGQRKAVQAVSDAVRRSRAGVADP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+PTGSF+FLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RL+GAPPGY+
Sbjct: 597 NRPTGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYI 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+++GGQLTEAVRRRPY+V+LFDE+EKAH VF+ LLQVLD+GRLTDGQGRTVDFRNT++
Sbjct: 657 GYDQGGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTIL 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSNLGA DQV+ VR F+PE +NRLD++++FD L+ E+L +
Sbjct: 717 ILTSNLGAGG-------------NEDQVMAAVRSAFKPEFINRLDDVIIFDGLNPEELVQ 763
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+ +A RL +R + L V+ A + +DP+YGARP+RR +++ + +L++ML
Sbjct: 764 IVDIQLAQLAKRLEQRRLTLEVSLPAKKWLGQRGFDPLYGARPLRRLVQQAIGDQLAKML 823
Query: 825 VREEIDENSTVYIDASPKGDNLV 847
+ E+ + V ++ SP G++LV
Sbjct: 824 LAGEVHDGDIVPVNVSPDGESLV 846
>gi|229101855|ref|ZP_04232569.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-28]
gi|228681438|gb|EEL35601.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-28]
Length = 866
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/874 (51%), Positives = 625/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E V +KK PS T + E + ++ L +++ RA+ + D +++V+ ++L
Sbjct: 61 KQDVENV----IKKKPSVTGSGAEAGKLYVTSNLQQLLVRARKEAEKLQDDYISVEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINHLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMSAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRQLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TD+A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDSAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|290962751|ref|YP_003493933.1| chaperone [Streptomyces scabiei 87.22]
gi|260652277|emb|CBG75410.1| chaperone [Streptomyces scabiei 87.22]
Length = 879
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/863 (52%), Positives = 611/863 (70%), Gaps = 29/863 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T K+ EA+ A A G + HL +ALL G+ + + AG E
Sbjct: 1 MDMNRLTQKSQEALQEAQTAAVRMGQTEVDGEHLLLALLDQEDGLIPRLLQQAGREPEEF 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
A + + + P T AP ++ + L +++ A+ K D +++V+ L+L L
Sbjct: 61 RA--AVGEELSRRPKVTGPGAAPGQVFVTQRLSRLLDAAEREAKRLKDEYVSVEHLLLAL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ + G L KE G+ S + ++RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 119 AEEGSATAAGRLLKEHGITRDSFLSALTQIRGNQ--RVTSANPEVAYEALEKYGRDLVAE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRRV +ILSR++KNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP
Sbjct: 177 ARNGKLDPVIGRDAEIRRVTQILSRKSKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMG+LVAGAKYRGEFEERLKAVL EV+ A+G ++LF+DE+H V+GAG EG
Sbjct: 237 LRDKTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQGHILLFVDELHTVVGAGAAEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L IGATTL+EYRK++EKDAA ERRFQQV V EPSV DT+SILR
Sbjct: 297 AMDAGNMLKPMLARGELHMIGATTLDEYRKHIEKDAALERRFQQVLVEEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E+ E HGV+IQD ALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 357 GLRERLEIFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ +LEIE AL KE D ASK RL E+R+EL DLR + +++ E++ I
Sbjct: 417 LDEITRRVTRLEIEEAALSKETDPASKTRLEELRRELADLRGEADAKHAQWEAERQAIRR 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLML 528
++ L+Q+ E++ +EAER YDL RAA+LRYG +Q+VE + QL Q +N +L
Sbjct: 477 VQELRQELEQVRHEAEEAERAYDLNRAAELRYGRLQDVERRLKSEEEQLAAKQG-QNRLL 535
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRS 577
E V ++IAE+V+ WTG+PV RL + E +ER+IG EAV VA++++R+
Sbjct: 536 REVVTEEEIAEIVAAWTGVPVARLQEGEREKLLRLDEILRERVIGQDEAVQLVADAIIRA 595
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E +VR+DMSEY E+H+VSRL+
Sbjct: 596 RSGIRDPRRPIGSFIFLGPTGVGKTELAKTLAAALFDSEENMVRLDMSEYQERHTVSRLM 655
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQ+LDDGR+TD QGRTV
Sbjct: 656 GAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRTV 715
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
DFRNTVIIMTSN+G+EHLL G + ++ +R V+ E+R HFRPE LNR+D+IV+F P
Sbjct: 716 DFRNTVIIMTSNIGSEHLLDGATAEGEIKPDSRALVMGELRGHFRPEFLNRVDDIVLFKP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L Q+ ++ LQ ++ RLAER + + +TD A +++ + YDP+YGARP+RR++ +V
Sbjct: 776 LGERQIERIVELQFDELRRRLAERRITVELTDEARELIAHQGYDPVYGARPLRRYISHEV 835
Query: 817 VTELSRMLVREEIDENSTVYIDA 839
T + R L+R ++ + + V +DA
Sbjct: 836 ETLVGRALLRGDVQDGAKVRVDA 858
>gi|296132448|ref|YP_003639695.1| ATP-dependent chaperone ClpB [Thermincola potens JR]
gi|296031026|gb|ADG81794.1| ATP-dependent chaperone ClpB [Thermincola potens JR]
Length = 868
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/859 (54%), Positives = 614/859 (71%), Gaps = 25/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++T K+ EA+A A +LA H + T HL LL+ G+ + + +AG A
Sbjct: 1 MDLHRYTQKSREALAGAQQLAAQRHHQEVTGKHLLAVLLTQEGGMAPRFLEHAGVNVGAL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+A +KK+P T + A + + + RA+ + D +++V+ L+L LLED
Sbjct: 61 AAG--VEGLLKKIPVVTGYEGSLYAGSGFTRTLARAEQEARDMKDDYVSVEHLLLALLED 118
Query: 121 SQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ + ++ + G+ + + +RG + +V + + T++AL+ YGRDL + A G
Sbjct: 119 GEPELKEVLRRNGLTRENLLHSLRSIRGNQ--RVTGENPEETYEALEKYGRDLTKLARQG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRRV+ ILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIV GDVP L D
Sbjct: 177 KLDPVIGRDEEIRRVIEILSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPEGLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
LI LDMGAL+AGAKYRGEFEERLKAVLKEV+E+ GK+ILFIDE+H V+GAG EG++DA
Sbjct: 237 VLIGLDMGALIAGAKYRGEFEERLKAVLKEVQESNGKIILFIDELHTVVGAGAAEGAVDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KPMLARG+LR IGATTL+EYRK+VEKDAA ERRFQ V V PSV DT+SILRGLKE
Sbjct: 297 GNLLKPMLARGELRTIGATTLDEYRKHVEKDAALERRFQPVLVNPPSVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI+D A+V AA LS RYI+ R LPDKAIDL+DEA A +R ++DS P E+D +
Sbjct: 357 RYEVHHGVRIKDSAIVAAAVLSDRYISDRFLPDKAIDLMDEAAARIRTEIDSLPTELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
R+ MQ+EIE AL KEKD+AS+ RL ++R +L +LR + + +++ EK+ I +R +
Sbjct: 417 TRRIMQMEIEEAALSKEKDEASQERLEKLRSQLAELRSEADAMKAQWEVEKQAISRLREI 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQ----LEGNQSDENLMLTETV 532
K++ EE ++ AER YDL R A+LRYG + +E + + L G Q ++L E V
Sbjct: 477 KKEIEETRQEIERAEREYDLNRLAELRYGKLANLERQLKEEEETLAGKQK-HGMLLKEEV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSRAGL 581
+ IA VVSRWTGIPV+RL EKE+LI G EAV AVA++VLR+RAG+
Sbjct: 536 DEEDIARVVSRWTGIPVSRLMAGEKEKLIHLDEELHKRVVGQDEAVRAVADAVLRARAGI 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTELA+ALA+ LFDDE ++R+DMSEYME+H+V+RLIGAPP
Sbjct: 596 KDPNRPIGSFIFLGPTGVGKTELARALAQALFDDERNMIRLDMSEYMEKHTVARLIGAPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGRLTDGQGRTV+F+N
Sbjct: 656 GYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHNDVFNVLLQLLDDGRLTDGQGRTVNFQN 715
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
TV+IMTSNLG++ +L+ + ++ VL +R++FRPE LNR+DEIVVF L EQ
Sbjct: 716 TVVIMTSNLGSQEILAQRERGGDYEQMKESVLGILRQYFRPEFLNRVDEIVVFHALKQEQ 775
Query: 762 LRKVARLQMKDVAIRL-AERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++++ARL M+ +A R+ A GV L T+ AL + + Y+P YGARP++R ++++V T L
Sbjct: 776 VKEIARLLMEKLAARVYAGAGVKLEWTENALTYLADKGYEPSYGARPLKRLIQQEVETPL 835
Query: 821 SRMLVREEIDENSTVYIDA 839
SRMLV+ EI + TV + A
Sbjct: 836 SRMLVKGEISDKETVVLQA 854
>gi|33866037|ref|NP_897596.1| endopeptidase Clp ATP-binding chain B [Synechococcus sp. WH 8102]
gi|33639012|emb|CAE08018.1| endopeptidase Clp ATP-binding chain B [Synechococcus sp. WH 8102]
Length = 875
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/860 (51%), Positives = 614/860 (71%), Gaps = 27/860 (3%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENA 58
M P ++FT + AI A +LA ++ H Q HL +ALL +G+ + ++ G +
Sbjct: 14 MQPTAEQFTEQAWAAIVAAQQLAQASRHQQLETEHLLLALLRQ-NGLAGRILSKTGVD-- 70
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ E +++LPS APD + +L K + RA+ + GD+ +A++ L+L L
Sbjct: 71 VTTFEASVEGHLQRLPSLGSAPDSVFLGRSLNKALDRAEQRRDGFGDSFIAIEHLLLALA 130
Query: 119 EDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
ED + G L +AGV +K + +RG + V + + T+++L YGRDL A
Sbjct: 131 EDDRCGRQLLSQAGVTTNTLKEAITAVRGNQ--TVTDQNPEATYESLAKYGRDLTAAARD 188
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
G+LDPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 189 GQLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPQALQN 248
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LI LDMGAL+AGAKYRGEFEERLKAVLKEV ++G+++LFIDEIH V+GAG + G+MD
Sbjct: 249 RQLITLDMGALIAGAKYRGEFEERLKAVLKEVTTSDGQIVLFIDEIHTVVGAGASGGAMD 308
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KPMLARG+LRCIGATTL+E+R+++EKD A ERRFQQV V +P+VPDT+SILRGLK
Sbjct: 309 ASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVPDTISILRGLK 368
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV AA LS+RYIT R LPDKAIDLVDE+ A +++++ S+PE+ID
Sbjct: 369 ERYEVHHGVRIADSALVAAAMLSSRYITDRFLPDKAIDLVDESAARLKMEITSKPEQIDE 428
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +L +E D AS+ RL + +EL +L ++ L +++ EK ID++
Sbjct: 429 IDRKILQLEMEKLSLGRESDSASQERLQRIERELAELGEQQSSLNAQWQSEKGAIDQLSA 488
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN----LMLTET 531
LK++ E + +++A+R YDL +AA+L YG + ++ + + E DE+ +L E
Sbjct: 489 LKEEIERVQLQVEQAKRNYDLNKAAELEYGTLATLQRQLQEQEDLLEDEDGTDKTLLREE 548
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V D IAEV+++WTGIPV RL Q+E E+L IG +AV AVA+++ RSRAG
Sbjct: 549 VTEDDIAEVIAKWTGIPVARLVQSEMEKLLQLEDDLHQRVIGQNQAVTAVADAIQRSRAG 608
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P SFLFLGPTGVGKTEL+KALA +LFD ++ +VRIDMSEYME+H+VSRLIGAP
Sbjct: 609 LSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDDAMVRIDMSEYMEKHTVSRLIGAP 668
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+E GGQLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTVDF
Sbjct: 669 PGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFT 728
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQE-VRKHFRPELLNRLDEIVVFDPLSH 759
NTV+I+TSN+G++ +L + G A +Q + E ++ FRPE LNRLD+ ++F L
Sbjct: 729 NTVLILTSNIGSQSILE-LAGDPEQHTAMEQRVNEALKAKFRPEFLNRLDDQIIFRSLEK 787
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E+LR++ LQ++ + RL +R + L ++D A D + +DP+YGARP++R +++++ T
Sbjct: 788 EELRRIVSLQVERLRSRLEQRKLDLQLSDIAADWLATIGFDPVYGARPLKRAIQRELETP 847
Query: 820 LSRMLVREEIDENSTVYIDA 839
+++ ++ ++ E TV +DA
Sbjct: 848 IAKAILAGQLSEGQTVQVDA 867
>gi|229114707|ref|ZP_04244121.1| Chaperone protein clpB 1 [Bacillus cereus Rock1-3]
gi|423380928|ref|ZP_17358212.1| chaperone ClpB [Bacillus cereus BAG1O-2]
gi|228668772|gb|EEL24200.1| Chaperone protein clpB 1 [Bacillus cereus Rock1-3]
gi|401630550|gb|EJS48351.1| chaperone ClpB [Bacillus cereus BAG1O-2]
Length = 866
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/874 (51%), Positives = 625/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPA---STTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E V +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQDVENV----IKKKPSVTGSGAEVGKLYITSNLQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINHLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRIIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMSAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEADGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TD+A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDSAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|365174642|ref|ZP_09362082.1| ATP-dependent chaperone ClpB [Synergistes sp. 3_1_syn1]
gi|363614439|gb|EHL65933.1| ATP-dependent chaperone ClpB [Synergistes sp. 3_1_syn1]
Length = 882
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/865 (52%), Positives = 624/865 (72%), Gaps = 32/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ +K T K+ EA A +A GH + +LA+ALL +G+ + + N E+
Sbjct: 9 MDMNKLTQKSQEAFYEAQNIAVRHGHQEVDAENLALALLRQENGLIPRLFDKMNVPVESL 68
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
A + E N+ KK P + A E I S L K++ RA+ + D +++V+ L L
Sbjct: 69 ANAVE---NELSKK-PRVSGAGQETGKIYVSQRLSKILVRAEDEADSLKDEYISVEHLFL 124
Query: 116 GLLEDSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLV 172
+L +++ +G +F G+ + + ++RG + +V S + + T+ AL+ YGRDLV
Sbjct: 125 AILYETKGSPLGRIFDTFGITPDKFLKTLSEVRGNQ--RVTSDNPEDTYDALEKYGRDLV 182
Query: 173 EQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP 230
+ A KLDPVIGRDEEIRR +RILSR+TKNNPVLIGEPGVGKTA+ EGLA RI+RGDVP
Sbjct: 183 KAARENKLDPVIGRDEEIRRTIRILSRKTKNNPVLIGEPGVGKTAIAEGLAIRIMRGDVP 242
Query: 231 SNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT 290
NL D + ALDMG+L+AGAK+RGEFEERLKAVL EV+++EG++ILFIDE+H ++GAG+T
Sbjct: 243 ENLKDRIIFALDMGSLIAGAKFRGEFEERLKAVLDEVKKSEGRIILFIDELHTIVGAGKT 302
Query: 291 EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSI 350
+G++DA N+ KP+LARG+L CIGATTLEEYR+Y+EKDAA ERRFQ V V PSV DT+SI
Sbjct: 303 DGALDAGNMLKPLLARGELHCIGATTLEEYRQYIEKDAALERRFQPVLVDPPSVEDTISI 362
Query: 351 LRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQP 410
LRGLKE+++ HHGVRIQD ALV AA LS RYI+ R LPDKAIDL+DEACA +R +DS P
Sbjct: 363 LRGLKERFQVHHGVRIQDSALVAAATLSNRYISDRFLPDKAIDLIDEACAMIRTDIDSLP 422
Query: 411 EEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
++D++ R+ MQLEIE AL+ EKDKASK RL ++KEL D+++ L +Y+ EKE I
Sbjct: 423 TDLDSVNRRVMQLEIEEAALKLEKDKASKDRLEALQKELADVKEHANTLRAQYEVEKENI 482
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENL 526
+IR ++++ E++ + EAER YDL AA LRYG + ++E + L G +
Sbjct: 483 VKIRSMREEIEKVRHQIDEAERSYDLNLAAQLRYGTLNKLEGDLKIEEENLSGIEKGGTK 542
Query: 527 MLTETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVL 575
+L E V ++IAE+V++WTGIPVTRL G+ EK ER++G EAV+ VA++VL
Sbjct: 543 LLREEVTEEEIAEIVAKWTGIPVTRLMEGEREKLLHLDAVLHERVVGQDEAVSLVADAVL 602
Query: 576 RSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSR 635
R+R+G+ P++P GSF+FLGPTGVGKTELA+ALAE LFD E+ +VRIDMSEYME+HSVSR
Sbjct: 603 RARSGIKDPKRPIGSFIFLGPTGVGKTELARALAESLFDSEDNIVRIDMSEYMEKHSVSR 662
Query: 636 LIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGR 695
L+GAPPGYVG+EEGGQLTEAVRR PYSVVLFDE+EKAH VFN +LQ+LDDGR+TD GR
Sbjct: 663 LVGAPPGYVGYEEGGQLTEAVRRHPYSVVLFDEIEKAHPDVFNIMLQILDDGRVTDSHGR 722
Query: 696 TVDFRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVF 754
TV+F+N VIIMTSN+GA+ L+ GM G+ + + A ++V+ +R FRPE LNR+DE++ F
Sbjct: 723 TVNFKNCVIIMTSNIGAQVLIDGMDGEGALSEGAVEEVMGLMRTKFRPEFLNRVDEMICF 782
Query: 755 DPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEK 814
PL+ + +R++ RL ++ + +RL +R + L +TD ALD+ YDP+YGARP++R+++K
Sbjct: 783 KPLTLKDIRQIVRLILRQLELRLHDRNIDLELTDEALDVCARNGYDPVYGARPLKRYVQK 842
Query: 815 KVVTELSRMLVREEIDENSTVYIDA 839
+ T ++R ++ +I + T+ + A
Sbjct: 843 ALETRIARAIIAGDIGDGGTIRVVA 867
>gi|260889049|ref|ZP_05900312.1| ATP-dependent chaperone protein ClpB [Leptotrichia hofstadii F0254]
gi|260861109|gb|EEX75609.1| ATP-dependent chaperone protein ClpB [Leptotrichia hofstadii F0254]
Length = 856
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/864 (49%), Positives = 611/864 (70%), Gaps = 29/864 (3%)
Query: 6 FTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAERV 65
FT K+ EAI+ A+ A H+ HL +AL+ G+ + G + R
Sbjct: 5 FTQKSIEAISEANNFAIRYRHSDIKVEHLLLALVGQMDGLIPSVLKKMGIDTTDMI--RK 62
Query: 66 FNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGD 125
++ P E A++ L +V+ A+ K GD++++ + L L +++ +
Sbjct: 63 IESKLESFPKIEGGNSEPRANSELNRVLVGARDIAKKMGDSYISTEHLFLASYDNN---N 119
Query: 126 LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIG 183
K+ G+ + ++ +E +RG GRK+ + + ++T++AL +G+DLVE A GKLDP+IG
Sbjct: 120 FLKDYGINKKQFETVLENVRG--GRKIMTDNPESTYEALDKFGKDLVELARKGKLDPIIG 177
Query: 184 RDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDM 243
RD EIRR ++ILSRR KNNP+LIGEPGVGKTA+ EG+AQRI++GDVP NL D + +LDM
Sbjct: 178 RDNEIRRAIQILSRRNKNNPILIGEPGVGKTAIAEGIAQRILKGDVPENLKDKTIFSLDM 237
Query: 244 GALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPM 303
GALVAGAKYRGEFEERLKAVL+E+E++EG++ILFIDE+H ++GAG+TEGSMDA NL KPM
Sbjct: 238 GALVAGAKYRGEFEERLKAVLEEIEKSEGRIILFIDEVHNIVGAGKTEGSMDAGNLLKPM 297
Query: 304 LARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHG 363
LARG+++ IGATT++EYRKY+EKDAA ERRFQ V V EP+V DT+SILRGLKEK+E HG
Sbjct: 298 LARGEIKVIGATTIDEYRKYIEKDAALERRFQPVMVDEPTVEDTISILRGLKEKFEIFHG 357
Query: 364 VRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQL 423
+RI D A+V AA +S RYI R LPDKAIDL+DEA A V+ +++S P E+D + R+ MQL
Sbjct: 358 IRITDNAIVTAATMSDRYINDRFLPDKAIDLIDEAAAKVKTEINSMPTELDEVTRRVMQL 417
Query: 424 EIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREEL 483
EIE ALEKEKD+ASK RLV + KEL +L +K +++ EK+ +++I+ + + E++
Sbjct: 418 EIEKVALEKEKDQASKDRLVTLEKELAELNEKKAAFKAQWESEKQEVEKIQNINTEIEKI 477
Query: 484 LFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQS-DENLMLTETVGPDQIAE 539
+ +A+R+ D + A+L+YG + E+E E NQ+ N +L + + ++IAE
Sbjct: 478 KLQIADAQRKNDYNKLAELQYGKLPELEKQRADEEEKAKNQNPSANKLLKQEIDSEEIAE 537
Query: 540 VVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQPT 588
+V +WTGIPV++L Q E+E R+IG EA+ +++++++RSRAGL P +P
Sbjct: 538 IVGKWTGIPVSKLLQGEREKILHLAEQMMKRVIGQDEAITSISDTIIRSRAGLKDPNRPI 597
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
GSF+FLGPTGVGKT L K LA LFDDE+ ++RIDMSEYM++ S +RLIGAPPGYVG+EE
Sbjct: 598 GSFIFLGPTGVGKTYLTKTLAFNLFDDESNIIRIDMSEYMDKFSTTRLIGAPPGYVGYEE 657
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGRLTDG+G+ VDF+NT+IIMTS
Sbjct: 658 GGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQLLDDGRLTDGKGKVVDFKNTIIIMTS 717
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
N+G+E +L + ++ VL E++ F+PE LNR+D+I+VF L E ++ + L
Sbjct: 718 NIGSEIILEDPQ---VSESTKEAVLNEMKHRFKPEFLNRIDDIIVFKALGKESVKNIISL 774
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
+ ++ +L E+ + + TD ALD ++ E+YDP YGARP++R+++K + T LS+M++ E
Sbjct: 775 ILDEINDKLKEQYIKIEFTDKALDYIVNEAYDPAYGARPLKRFVQKDIETNLSKMILSNE 834
Query: 829 IDENSTVYIDASPKGDNLVYRVQK 852
+ ENSTV +D+ G+ L+Y V+K
Sbjct: 835 VPENSTVVLDSD--GEKLIYDVKK 856
>gi|390442448|ref|ZP_10230443.1| Chaperone [Microcystis sp. T1-4]
gi|389834227|emb|CCI34569.1| Chaperone [Microcystis sp. T1-4]
Length = 872
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/857 (51%), Positives = 612/857 (71%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP +FT K EAI ++A Q HL ALL A ++ + + A+
Sbjct: 5 NPQQFTEKAWEAIVKTPDIAKQHSQQQIESEHLMKALLEQEG--LAGSVFSKANISLARL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + +++ P + D I +L ++ RA+ ++ GD ++++ LILG +D
Sbjct: 63 RDRT-DDFIRRQPKISNPGDSIYLGRSLDSLLDRAENYRREFGDDFISIEHLILGYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G ++F+E G+ ++K ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGKNIFQEFGLTENKLKEIIQQVRGSQ--KVTDQNPEGKYEALEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLLDRTL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LD+G L+AGAKYRGEFEERLKAVLKEV +++G +I+FIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDLGGLIAGAKYRGEFEERLKAVLKEVTDSQGNIIMFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADNALVAAALLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L++E D AS+ RL ++ KEL +L+++ L +++ EKE ID++R +K+
Sbjct: 420 KILQLEMEKLSLQREYDPASRERLEKLEKELANLKEEQSGLNAQWQGEKEIIDKVRGVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL----MLTETVGP 534
E++ +Q+AER YD RAA+L++G + +++ + LE +D+ +L E V
Sbjct: 480 AIEQVNLEIQQAERDYDYNRAAELKFGKLTDLQRQMSALETQLADKQTTGKSLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+ +L ++ E +IG EAV AVAE++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPLNKLIESEKEKLLNLEEELHESVIGQEEAVTAVAEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E LVRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PHRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHSVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDSQGHLVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + + +V++ +R FRPE LNR+DE ++F L QLR
Sbjct: 720 IIMTSNIGSQYILDVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDETIIFHSLQKAQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ+ +++ RL E+ +AL D ALD + YDP+YGARP++R +++ V T +++
Sbjct: 780 SIVKLQIGNLSDRLMEQKLALKFADIALDYLAEIGYDPVYGARPLKRAVQRYVETPIAKA 839
Query: 824 LVREEIDENSTVYIDAS 840
++R E T+++D +
Sbjct: 840 ILRGEFKAGDTIFVDVA 856
>gi|392948965|ref|ZP_10314564.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
pentosus KCA1]
gi|392435784|gb|EIW13709.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
pentosus KCA1]
Length = 867
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/870 (52%), Positives = 613/870 (70%), Gaps = 27/870 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE--NA 58
MNP++FT +A+ A +A + H + HL L+ P + Q + AG +
Sbjct: 1 MNPEQFTESLQQALQEAQHIAQTRRHQEIGVPHL-FKFLTQPGELVRQIFSEAGADLDQL 59
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q +R + + S S++L +++ A A +K+ GD +LA D L L L+
Sbjct: 60 QQELDRELDDI--AVVSGGNVQYGSAMSSSLATLMQTADAKRKSLGDDYLATDTLALALM 117
Query: 119 EDS--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ + Q+ G+ +VK+ V+++RG G++V S + + +QAL+ YG DLV+QA
Sbjct: 118 DQTGDQLTKYLTAQGITAGQVKNAVDRIRG--GQRVTSRNQEDQYQALEKYGVDLVKQAR 175
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
G DPVIGRDEEI V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP NL
Sbjct: 176 QGNQDPVIGRDEEILDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPENLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D L +LDMG+L+AGAKYRGEFEERLKAVLKE+++++G++I+FIDEIH ++GAG+TEGSM
Sbjct: 236 DKTLFSLDMGSLIAGAKYRGEFEERLKAVLKEIKKSDGQIIMFIDEIHNIVGAGKTEGSM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L IGATTL+EYR+Y+EKD A ERRFQ+V VAEPSV DT+SILRGL
Sbjct: 296 DAGNLLKPMLARGELHLIGATTLDEYRQYMEKDKALERRFQKVLVAEPSVEDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGVRI D ALV AA+LS RYIT R+LPDKA+DLVDEA A +RV+++S P E+D
Sbjct: 356 KERFEIHHGVRIHDNALVAAAKLSDRYITDRYLPDKALDLVDEASAEIRVEMNSNPTELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ M+LE+E AL+KE D AS RL +V+KEL ++K + L R+ EK+ + +
Sbjct: 416 QVNRQLMRLEVEEAALKKETDDASVKRLGDVQKELASAKEKQRALSERWDSEKKSLQALS 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
K ++ L+ AE YDL +AA L++G I E+E + +E N E+ ++ E+V P
Sbjct: 476 DKKSALDKAKHELETAESNYDLEKAAKLQHGTIPELEQELKAMEANDHHEDWLVEESVTP 535
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGR 583
DQIA VVSR TGIPV +L E+E+L+ LA+ AV+AV+++VLRSRAGL
Sbjct: 536 DQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDAVLRSRAGLQD 595
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSF+FLGPTGVGKTELAKALAE LFD ++ +VRIDMSEYME+ SVSRL+GA PGY
Sbjct: 596 PNRPLGSFMFLGPTGVGKTELAKALAENLFDADDHMVRIDMSEYMEKESVSRLVGAAPGY 655
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR PYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+
Sbjct: 656 VGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTI 715
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSNLG+E LL+G+ G ++ + QV+Q V+ F+PE LNR+D+I++F PL +
Sbjct: 716 LIMTSNLGSELLLAGVDDQGHLSDET-HSQVMQLVQSRFKPEFLNRIDDIIMFTPLQLDA 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++ + ++ RL +R + L ++D A + + Y+P YGARP+RR++ V T L+
Sbjct: 775 IEEIVVKLIDRLSARLQDREITLKISDEAKKWIAKQGYEPAYGARPLRRFITNHVETPLA 834
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+ ++ + STV I+ D+LV+ Q
Sbjct: 835 KEIIAGRVAPKSTVAINLL--DDHLVFENQ 862
>gi|431793874|ref|YP_007220779.1| ATP-dependent chaperone ClpB [Desulfitobacterium dichloroeliminans
LMG P-21439]
gi|430784100|gb|AGA69383.1| ATP-dependent chaperone ClpB [Desulfitobacterium dichloroeliminans
LMG P-21439]
Length = 866
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/860 (51%), Positives = 615/860 (71%), Gaps = 21/860 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+ ++FT K+ EAI A +A G+ Q P HL +ALL G+ Q +
Sbjct: 3 FDTNRFTQKSQEAIIQAQTMAERNGNGQVEPEHLLLALLEQGEGVVPQVLTKLNIP-VGV 61
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
A++V Q +++ P T ++ S+ L V+ A + D +++ + L+L +LE
Sbjct: 62 LAQKV-RQDIQRFPRMTGTSVQLTISSRLRTVLVSAHDEMETFKDEYVSTEHLLLAILEK 120
Query: 121 SQIG--DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ G L K+ G+ ++ + ++RG + +V S + + TFQAL+ YGR+LVEQA G
Sbjct: 121 GEGGAEKLLKQEGLNREKLLQVLREIRGTQ--RVTSQTPEGTFQALEQYGRNLVEQARRG 178
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGL+QRIVRGDVP ++ D
Sbjct: 179 KLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLSQRIVRGDVPESVKDK 238
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
++I LDMG L+AGAKYRGEFEERLKAVLKEV+E E +ILFIDE+H V+GAG EG+MDA
Sbjct: 239 KVINLDMGLLIAGAKYRGEFEERLKAVLKEVQERE-DIILFIDELHTVVGAGAAEGAMDA 297
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+N+ KPMLARG+L +GATTLEEYRKY+EKDAA ERRFQ V V PSV DT+SILRGLKE
Sbjct: 298 SNMLKPMLARGELHMVGATTLEEYRKYIEKDAALERRFQPVMVGAPSVEDTISILRGLKE 357
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D A++ AA LS RYI+ R LPDKAIDLVDEA A +R+++ S P E+D +
Sbjct: 358 RYETHHGVRITDGAIISAAILSDRYISDRFLPDKAIDLVDEAAARLRMEITSDPYELDQI 417
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QLEIE AL+KEKD SK RL ++ ++L +L+++ L + + E+E + I +L
Sbjct: 418 KRRVLQLEIEREALKKEKDDGSKDRLAKIEEDLANLKEERGALEAQLQGEREVLTNINKL 477
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVGPD 535
K++ ++ +++A++ YD +AA+L+YG + ++E + LE Q+ +N +L + VG +
Sbjct: 478 KEEIDQTRTKMEQAQQTYDYNKAAELQYGILPKLEKDLNTLEEQLQTRKNTLLKQEVGEE 537
Query: 536 QIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGRP 584
IAEVV++WT +PVT+L ++E ER+IG EAV AVA++V R+RAGL P
Sbjct: 538 DIAEVVAKWTQVPVTKLLESEMDKLVHMEERIHERVIGQEEAVKAVADAVRRARAGLQDP 597
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALAE LFDD+ +VRIDMSEYME+H+V+RLIGAPPGYV
Sbjct: 598 NRPLGSFLFLGPTGVGKTELAKALAEFLFDDDQGIVRIDMSEYMEKHTVARLIGAPPGYV 657
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQ+LDDGRLTDGQGR V+F+NTV+
Sbjct: 658 GYEEGGQLTEAVRRKPYSVVLFDEVEKAHGDVFNVLLQLLDDGRLTDGQGRVVNFKNTVV 717
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSN+ + + + +V R +V +E++ FRPE LNRLDE++VF PL E +R
Sbjct: 718 ILTSNIASPLIQEMTASGASQEVLRSKVSEELKHFFRPEFLNRLDEMIVFHPLGQEHIRS 777
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ ++Q+ + LA R + L ++DAA +I++ + YDPIYGARP++R ++ + L+ +
Sbjct: 778 IVQIQLDLLRKYLAPRKITLNLSDAAQNIIVQQGYDPIYGARPLKRVIQHNLQNPLAMRI 837
Query: 825 VREEIDENSTVYIDASPKGD 844
++ I E + V +D + +G+
Sbjct: 838 LQGTIHEGAHVMVDVNSRGE 857
>gi|300867974|ref|ZP_07112613.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
gi|300333995|emb|CBN57791.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
Length = 870
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/855 (50%), Positives = 617/855 (72%), Gaps = 26/855 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K EAIA ++ + Q HL ALL A ++ G N Q
Sbjct: 5 NPNQFTEKAWEAIARTPDIVKQSQQQQLESEHLMKALLEQDG--LANSLFTKAGINVRQL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + + + P + + + +L ++ RA+A +K + D ++++ L+L +D
Sbjct: 63 QDRT-EEFINRQPKISGSGASVYLGRSLDTLLDRAEAHRKEYEDEFISIEHLVLAYPQDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LF+E + A++K + ++RG + KV + + +++L+ YGRDL E A GKL
Sbjct: 122 RFGKSLFQEFKLDEAKLKEIIAQVRGNQ--KVTDQNPEVKYESLEKYGRDLTEFAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D RL
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGDVPQSLKDRRL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKEV +++G +ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEVTDSKGLIILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPTVEDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKISDSALVAAATLSTRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE AS RL + K+L + +++ L +++ EK + I+++K+
Sbjct: 420 KILQLEMERLSLQKESAPASIERLERLEKDLANFKEQQSALNGQWQAEKGVLGNIQKIKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTETVGP 534
+ +++ +Q+AER Y+L RAA+L+YG + E +E A +L Q+ +L E V
Sbjct: 480 QIDKVNIEIQQAEREYNLNRAAELKYGTLTELQKQLEEAETKLTATQTTGQTLLREEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++E ++L IG EAV AVA+++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEMQKLLHLEDELHKRVIGQDEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFD E+ +VRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPVASFIFLGPTGVGKTELAKALAAYLFDTEDAMVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPY+V+LFDE+EKAH VFN +LQ+LDDGR+TD QG TVDF+N V
Sbjct: 660 VGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDAQGHTVDFKNAV 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L M R +V++ +R FRPE LNR+DE ++F LS ++LR
Sbjct: 720 IIMTSNVGSQYILDVGGDDEEM---RSRVMEAMRGTFRPEFLNRIDETIIFQGLSKQELR 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ+ + RLA+R +++ ++D+ALD + YDP+YGARP++R +++++ T++++
Sbjct: 777 QIVKLQIGRLDKRLADRKMSIKLSDSALDFLAEVGYDPVYGARPLKRAIQRELETQIAKS 836
Query: 824 LVREEIDENSTVYID 838
++R + + T+++D
Sbjct: 837 ILRGDFSDGDTIFVD 851
>gi|226325297|ref|ZP_03800815.1| hypothetical protein COPCOM_03089 [Coprococcus comes ATCC 27758]
gi|225206645|gb|EEG88999.1| ATP-dependent chaperone protein ClpB [Coprococcus comes ATCC 27758]
Length = 866
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/859 (51%), Positives = 606/859 (70%), Gaps = 31/859 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + A+ ++A G+ + HL +LL+ + + I G
Sbjct: 1 MNINKFTQSSMAAVQNLEKIAADYGNQEIEQEHLLYSLLTIDDSLILKLIEKMG-----I 55
Query: 61 SAERVFNQA---MKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ E + N+ ++K P ++ L V+ + K GD +++V+ L L L
Sbjct: 56 TKETMMNRVEELLRKRPKVQGG--QMYIGQNLNNVLIHGEDEAKQMGDEYVSVEHLFLAL 113
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L+ + +I + KE G+ + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 114 LKYANREIKGMMKELGITRESFLQVLSSVRGNQ--RVTSDNPEATYDTLNKYGEDLVEKA 171
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA VEGLAQRIVRGDVP L
Sbjct: 172 REQKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAAVEGLAQRIVRGDVPEAL 231
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D ++ ALDMGALVAGAKYRGEFEERLKAVL+EV+ ++G +ILFIDE+H ++GAG+++G+
Sbjct: 232 KDKKVFALDMGALVAGAKYRGEFEERLKAVLEEVKNSDGNIILFIDELHTIVGAGKSDGA 291
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EPSV D +SILRG
Sbjct: 292 MDAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVDEPSVEDAISILRG 351
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HGV+I D ALV A LS RYI+ R LPDKAIDLVDEACA+++ +LDS P E+
Sbjct: 352 LKERYEVFHGVKITDSALVAAVTLSNRYISDRFLPDKAIDLVDEACASIKTELDSMPTEL 411
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L RK MQLEIE AL+KE D+ SK RL ++++EL + R+K ++ EK ++ +
Sbjct: 412 DELNRKIMQLEIEEAALKKEDDRLSKERLQKLQEELAEEREKFAKQKAQWDNEKHSVEHV 471
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETV 532
++++++ E+L ++ A+R YDL +AA+L+YG + +++ + + E DE+L L E+V
Sbjct: 472 QKIREQIEQLNREIEAAQRSYDLNKAAELQYGRLPQLQKQLEEEEAKVKDEDLSLVHESV 531
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
D+IA+++SRWTGIPV +L ++E+ +R+IG E V V ++++RS+AG+
Sbjct: 532 TDDEIAKIISRWTGIPVAKLNESERSKTLHLADELHKRVIGQDEGVTKVTDAIIRSKAGI 591
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTELAKALAE LFDDEN +VRIDMSEYME++SVSRLIGAPP
Sbjct: 592 KDPTKPIGSFLFLGPTGVGKTELAKALAENLFDDENNMVRIDMSEYMEKYSVSRLIGAPP 651
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+N
Sbjct: 652 GYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKN 711
Query: 702 TVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
T++IMTSN+G+ +LL G+ G + + A + V+ ++R HFRPE LNRLDE ++F PL+
Sbjct: 712 TILIMTSNIGSSYLLDGIDENGDIKPE-AEEMVMNDLRAHFRPEFLNRLDETIMFRPLTK 770
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
+ + + L + D+ RLA++ + + +T+AA +V+ YDP YGARP++R+L+K V TE
Sbjct: 771 DNVYSIISLLVNDINKRLADKELRIELTEAAKQLVVEGGYDPTYGARPLKRYLQKNVETE 830
Query: 820 LSRMLVREEIDENSTVYID 838
+++++ + T+ ID
Sbjct: 831 AAKLILEGNVGSGDTILID 849
>gi|196036224|ref|ZP_03103623.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus W]
gi|195991199|gb|EDX55168.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus W]
Length = 866
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/874 (52%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ A+ N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAARIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + KV S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--KVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLHLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +T+AA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVKLTEAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|383826736|ref|ZP_09981858.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium
xenopi RIVM700367]
gi|383332104|gb|EID10588.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium
xenopi RIVM700367]
Length = 848
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/863 (53%), Positives = 604/863 (69%), Gaps = 36/863 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + A++AGH + P HL +ALL+ GI A + G E A
Sbjct: 4 FNP---TTKTQAALTSALQAASAAGHPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATI 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
AE + + +LP T A + S + I AQ D +++ + L++GL
Sbjct: 61 RAE--AQRLIDRLPQVTGASSQPQLSRESLAAITAAQQLATEMDDEYVSTEHLMVGLATG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
DS + L G + ++ K+RG +V S + T+QAL+ Y +L A GK
Sbjct: 119 DSDVAKLLNGHGASPQALREAFVKVRGSA--RVTSPDPEATYQALEKYSTNLTAAAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D
Sbjct: 177 LDPVIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+IALD+G++VAG+KYRGEFEERLKAVL++++ + G++I FIDE+H ++GAG T EGSMDA
Sbjct: 237 IIALDLGSMVAGSKYRGEFEERLKAVLEDIKNSAGQIITFIDELHTIVGAGATGEGSMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRK++EKDAA ERRFQ VYV EPSV DT+ ILRGLK+
Sbjct: 297 GNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQPVYVGEPSVEDTIGILRGLKD 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+P EID +
Sbjct: 357 RYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE AL KE+D+AS+ RL ++R EL D ++KL L R++ EK ID +R L
Sbjct: 417 ERLVRRLEIEEMALAKEEDEASRERLEKLRAELADQKEKLAELTTRWQNEKNAIDTVREL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLEGNQSDENLMLTETVGPD 535
K++ E L + AER DLA+AA+LRYG I EVE + L Q+ E +ML E VGPD
Sbjct: 477 KEQLERLRGESERAERDGDLAKAAELRYGRIPEVEKKLEAALPQAQAREAMMLKEEVGPD 536
Query: 536 QIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGRP 584
IAEVVS WTGIP RL + E +R++G AV AV+++V RSRAG+ P
Sbjct: 537 DIAEVVSAWTGIPAGRLLEGETAKLLRMEDELSKRVVGQRRAVQAVSDAVRRSRAGISDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+PTG+F+FLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RLIGAPPGYV
Sbjct: 597 NRPTGAFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGERHSVARLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+E GGQLTEAVRRRPY+VVLFDE+EKAH VF+ LLQVLD+GRLTDGQGRTVDFRNT++
Sbjct: 657 GYESGGQLTEAVRRRPYTVVLFDEIEKAHQDVFDVLLQVLDEGRLTDGQGRTVDFRNTIL 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSNLG+ + +QV+ VR F+PE +NRLD +++FD L+ E+L +
Sbjct: 717 ILTSNLGSGG-------------SEEQVMAAVRATFKPEFINRLDAVLIFDGLNPEELVQ 763
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q++ + RLA+R + L V+ A + +DP+YGARP+RR +++ + +L++ML
Sbjct: 764 IVDIQLEQLGKRLAQRRLQLEVSLQAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKML 823
Query: 825 VREEIDENSTVYIDASPKGDNLV 847
+ ++ + TV ++ SP GD+L+
Sbjct: 824 LSGQVHDGDTVPVNVSPDGDSLI 846
>gi|222529497|ref|YP_002573379.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor bescii DSM 6725]
gi|222456344|gb|ACM60606.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor bescii DSM 6725]
Length = 864
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/860 (50%), Positives = 618/860 (71%), Gaps = 28/860 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN ++FT A+ A A H + P HL AL+++ + A+ + N G + +
Sbjct: 1 MNMERFTQSLQTALLDAQNTAIVYKHQEIGPEHLHYALVNEDGKLVAKILKNMGID--IE 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+R + +KK+P P + + + +++ RA+ K D +++V+ + L ++
Sbjct: 59 LYKRDVEEQLKKIPMVYGPGASTVYVNRYVNEILIRAEEEAKKFKDEYISVEHVYLAMI- 117
Query: 120 DSQI---GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
DS I ++F++ G+ + ++ K+RG + ++ + + + ++ LK YGRDL E A
Sbjct: 118 DSDIPSSKNIFRKYGITREKFLQQLYKIRGNQ--RITNPNPEEVYEVLKKYGRDLTELAR 175
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L
Sbjct: 176 KGKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + ALD+GAL+AGAKYRGEFEERLKAVL E+ +EG++ILFIDEIH ++GAGR EG+M
Sbjct: 236 DKTIFALDLGALIAGAKYRGEFEERLKAVLNEIIASEGRIILFIDEIHNIVGAGRAEGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT++EYR+Y+EKDAA ERRFQ V V PSV DT+SILRGL
Sbjct: 296 DAGNLLKPMLARGELHCIGATTIDEYRRYIEKDAALERRFQPVLVNPPSVEDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGVRI D AL+ AA+LS RYI+ R LPDKAIDL+DEA A +R ++DS P E+D
Sbjct: 356 KERFEIHHGVRITDDALIAAAKLSDRYISDRFLPDKAIDLIDEAAALLRTEIDSMPTELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQL IE + L+KE++ ++K R+ E+ KE+ L+ + L +++ EKE I E+R
Sbjct: 416 EITRKIMQLRIENNVLQKEENPSAKQRIEEIEKEIAQLQSRADELSAQWEYEKELIKEVR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLMLTE 530
R+K++ E + ++EAER YDL R ++L+YG + E++ A+ +LE E +L E
Sbjct: 476 RIKEEIENVKIQIEEAERNYDLNRLSELKYGKLIELQKALDRKRQELE-KIPPEKRLLKE 534
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRA 579
V ++IA++VS+WTGIPV +L + E++ R++G EA+ AV +++R+RA
Sbjct: 535 EVTEEEIAKIVSKWTGIPVAKLVETERQKILELDKILHRRVVGQDEAIEAVCNAIMRARA 594
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P G+FLFLGPTGVGKTELA+ALAE LFD EN ++RIDM+EYME+HSVSRLIGA
Sbjct: 595 GIKDPRKPIGTFLFLGPTGVGKTELARALAEALFDSENNMIRIDMTEYMEKHSVSRLIGA 654
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVR +PYSVVLFDE+EKAH VFN LLQ++DDGRLTD +GRTVDF
Sbjct: 655 PPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHRDVFNILLQIMDDGRLTDSKGRTVDF 714
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NT+IIMTSNLG+E+LL+ + + + R + +E++ HFRPE LNRLDEI++F PL+
Sbjct: 715 KNTIIIMTSNLGSEYLLNAKISNGEIDEETRKLIDRELKLHFRPEFLNRLDEIIIFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
EQ+ K+ L++ ++ +L E+G+++ +T A + V+ ++D +GARPI+R+L+K V T
Sbjct: 775 KEQIIKIIDLRVAEIQQKLIEKGISIRLTQRAKEFVMENAFDVNFGARPIKRFLQKNVET 834
Query: 819 ELSRMLVREEIDENSTVYID 838
+++ +++ I E ++ ID
Sbjct: 835 LIAKEILKGTIVEGDSIDID 854
>gi|407476337|ref|YP_006790214.1| chaperone protein ClpB [Exiguobacterium antarcticum B7]
gi|407060416|gb|AFS69606.1| Chaperone protein ClpB [Exiguobacterium antarcticum B7]
Length = 857
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/868 (51%), Positives = 615/868 (70%), Gaps = 30/868 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T + +EAI A +A H++ T HL ++L+S GI A+ + + Q
Sbjct: 1 MDFEKLTDRAHEAIISAQAIAKQRRHSEITEWHLLLSLISQEEGI-ARIVFEKLDQRMDQ 59
Query: 61 SAERVFNQAMKKLPS--QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
E N+A+ +LP+ Q+ P S +L++V+ A+ + D +++V+ L+LGL+
Sbjct: 60 -LEVAINEAIGRLPALGQSSTP---RISNSLLQVLTEAETEARLMQDDYVSVEHLLLGLV 115
Query: 119 EDSQIGDLF-KEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QA 175
+ S + + GV ++ + ++RG RKV + + + TF LK YGRDLV ++
Sbjct: 116 KQSSPATQYLRSQGVTEPLLREAIIEMRG--NRKVTTKNPEATFDVLKKYGRDLVADFRS 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GK DPVIGRD+EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP +L +
Sbjct: 174 GKTDPVIGRDDEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPESLKN 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L +LDM LVAGAKYRGEFEERL+AVL EV+EAEG+++L +DE+H ++GAG+TEG+MD
Sbjct: 234 KQLFSLDMSTLVAGAKYRGEFEERLQAVLNEVKEAEGQILLRVDELHTIVGAGKTEGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV VAEP V DT+SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLVAEPDVEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E++E +HGVRI D ALV AA LS RYIT R +PDKAIDLVDEACA +R ++S P E+D+
Sbjct: 354 ERFEIYHGVRIHDNALVAAAILSDRYITDRFMPDKAIDLVDEACAMIRTDMESMPAELDS 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L R+ MQLEIE AL+KE D+AS+ RL +++EL +R+ L R+++EK+ +++
Sbjct: 414 LVRRVMQLEIEEAALKKETDEASRKRLDVLQQELSSVREDESALRTRWEREKDSSQNVQQ 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL---MLTETV 532
L+ E+ ALQEAE RYDL A++++YG I E+E + E +S E + ++ E V
Sbjct: 474 LRADLEKAKLALQEAEGRYDLNTASEIKYGQIPELENRLKVAE--ESAEQVSHELVREAV 531
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSRAGL 581
++I+++VS+WTGIPVTRL Q E+E+L+ G EAV V+++V+R+RAG+
Sbjct: 532 TDEEISDIVSKWTGIPVTRLAQGEREKLLYLEDTLHQRVFGQDEAVRLVSDAVIRARAGI 591
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTELAKALA +FD E +VRIDMSEYME+H+VSRL+GAPP
Sbjct: 592 KDPNRPIGSFLFLGPTGVGKTELAKALAAAMFDSEEHIVRIDMSEYMEKHNVSRLVGAPP 651
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR PYSV+LFDE+EKAH VFN LLQVLDDGRLTD QGR VDF+N
Sbjct: 652 GYVGYEEGGQLTEAVRRSPYSVLLFDEIEKAHGDVFNILLQVLDDGRLTDAQGRMVDFKN 711
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T++IMTSN+G+ LL + V QE++ +FRPE LNR+D+ ++F PL +
Sbjct: 712 TIVIMTSNIGSNILLEAAKDGNIDAAEEEAVRQELKNYFRPEFLNRIDDTILFHPLHRAE 771
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++ + +A RL+ R + + VTDAA ++ E+++P YGARPI R++++ + T+L+
Sbjct: 772 IERIIDKAVSKMADRLSGREITIDVTDAAKTLIFNEAFEPQYGARPINRYIQRTIETKLA 831
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYR 849
R L+ I + S V +D G LV R
Sbjct: 832 RALISGAIQDGSHVAVDTD--GTELVIR 857
>gi|423588334|ref|ZP_17564421.1| chaperone ClpB [Bacillus cereus VD045]
gi|423647208|ref|ZP_17622778.1| chaperone ClpB [Bacillus cereus VD169]
gi|401226319|gb|EJR32859.1| chaperone ClpB [Bacillus cereus VD045]
gi|401286602|gb|EJR92422.1| chaperone ClpB [Bacillus cereus VD169]
Length = 866
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/874 (52%), Positives = 625/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + E +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQETRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|310814544|ref|YP_003962508.1| chaperone protein clpB [Ketogulonicigenium vulgare Y25]
gi|308753279|gb|ADO41208.1| chaperone protein clpB [Ketogulonicigenium vulgare Y25]
Length = 870
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/872 (52%), Positives = 610/872 (69%), Gaps = 25/872 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT ++ + A +A GH + P H+ ALL DP G+ A IN AGG AA
Sbjct: 1 MNLEKFTERSRGFLQAAQTIAMREGHQRLLPEHILKALLDDPEGLSANLINRAGG--AAD 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-LE 119
+ A+ +LP + ++ + +V+ A+ GD+ + V++L+ L L
Sbjct: 59 RVREAVDLAVSRLPKVSGDAGQVYLDSLTGRVLDEAEQISTKAGDSFVTVERLLTALALV 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
S+ + V + + + +R +GR +SA + F ALK Y RDL E A GK
Sbjct: 119 KSKAKEALDAGAVTPQGLNTAINDIR--KGRTADSAGAEDGFDALKKYARDLTEDAAAGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DP+IGRDEEIRR +++LSRRTKNNP+LIGEPGVGKTA+ EGLA RI+ GDVP +L + +
Sbjct: 177 IDPIIGRDEEIRRAMQVLSRRTKNNPILIGEPGVGKTAIAEGLALRIINGDVPESLRNKK 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ALDMG+L+AGAKYRGEFEERLK++LKE+E A G+VILFIDEIH ++GAG+ +G+MDAA
Sbjct: 237 LLALDMGSLIAGAKYRGEFEERLKSILKEIEAAAGEVILFIDEIHTLVGAGKADGAMDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L C+GATTL+EYRKY+EKDAA RRFQ + VAEP+V DT+SILRG+KEK
Sbjct: 297 NLIKPALARGELHCVGATTLDEYRKYIEKDAALARRFQPIVVAEPNVEDTISILRGIKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AAQLS RYIT R LPDKAIDLVDEA + +R+++DS+PEE+D L+
Sbjct: 357 YELHHGVRISDSALVAAAQLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
+ +Q +IE AL+KE D ASK RL ++ +EL DL+++ L +++ E+++++ R LK
Sbjct: 417 PEVLQKQIEAEALKKEDDTASKDRLEKLERELSDLQERAASLTAKWQSERDQMEAARGLK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+K E+ L+ A+R +L +A +L YG I ++E I + + E++M+ ETV P+QI
Sbjct: 477 EKLEKARAELEIAKREGNLGKAGELSYGIIPQLERDIAAAD---TAESVMVEETVRPEQI 533
Query: 538 AEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEVV RWTGIP R+ + E++ R+IG EAV+AVA +V R+RAGL +
Sbjct: 534 AEVVERWTGIPTARMLEGERDKLLRMEDELGRRVIGQREAVHAVANAVRRARAGLNDENR 593
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KA+AE LFDD+ +VRIDMSE+ME+HSV+RLIGAPPGYVG+
Sbjct: 594 PLGSFLFLGPTGVGKTELTKAVAEFLFDDDTAMVRIDMSEFMEKHSVARLIGAPPGYVGY 653
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDG LTDGQGRTVDF+ T+I++
Sbjct: 654 EEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGMLTDGQGRTVDFKQTLIVL 713
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ LS + V A+D+V+ VR HFRPE LNRLDEI++FD LS + +
Sbjct: 714 TSNLGSQA-LSMLPEGVGKDEAKDEVMAAVRGHFRPEFLNRLDEIIIFDRLSRADMDGIV 772
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q+K + RLA R V LA+ +A + E YDP++GARP++R +++ + L+ ML+
Sbjct: 773 TIQLKRLENRLAARKVTLALDSSARTWLADEGYDPVFGARPLKRVIQRALQDPLASMLLS 832
Query: 827 EEIDENSTVYIDASPKGDNLVYRV---QKNGG 855
EI + + + + A G + RV QK+ G
Sbjct: 833 GEILDGTEIPVTAGAHGLVVGSRVADAQKDHG 864
>gi|17232576|ref|NP_489124.1| endopeptidase Clp ATP-binding subunit B [Nostoc sp. PCC 7120]
gi|17134222|dbj|BAB76783.1| endopeptidase Clp ATP-binding chain B [Nostoc sp. PCC 7120]
Length = 835
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/811 (52%), Positives = 603/811 (74%), Gaps = 21/811 (2%)
Query: 46 FAQAINNAGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGD 105
A I G N + ++R Q +++ P + + +L ++ RA+A +K D
Sbjct: 10 LASGILTKAGVNLQKISDRT-EQYIQRQPKVSGNSTSVYLGRSLDTLLDRAEAHRKDFQD 68
Query: 106 THLAVDQLILGLLEDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQAL 164
+++++ L+L +D + G LF+E + +++K+ ++++RG + V + + +Q+L
Sbjct: 69 EYISIEHLLLAYPKDDRFGKGLFQEFALDESKLKNIIKQVRGSQ--TVTDQNPEGKYQSL 126
Query: 165 KTYGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQ 222
+ YGRDL E A G+LDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQ
Sbjct: 127 EKYGRDLTEAARKGQLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQ 186
Query: 223 RIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIH 282
RIV GDVP +L D +LI+LDMGA++AGAK+RGEFEERLKAVLKEV E+ G ++LFIDEIH
Sbjct: 187 RIVAGDVPQSLKDRKLISLDMGAMIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIH 246
Query: 283 LVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEP 342
V+GAG T+G+MDA NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P
Sbjct: 247 TVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQP 306
Query: 343 SVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANV 402
SV DT+SILRGLKE+YE HHGV+I D +LV AA LS+RYI+ R LPDKAIDLVDEA A +
Sbjct: 307 SVEDTISILRGLKERYEVHHGVKISDSSLVAAATLSSRYISDRFLPDKAIDLVDEAAARL 366
Query: 403 RVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMR 462
++++ S+PEE+D ++RK +QLE+E +L+KE D AS+ RL + KEL DL+++ + L +
Sbjct: 367 KMEITSKPEELDEIDRKILQLEMEKLSLQKESDAASRERLERLEKELADLKEEQRTLNTQ 426
Query: 463 YKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLE 518
++ EK+ I++++ +K++ +++ +Q+AER YDL RAA+L+YG + + +EA +L
Sbjct: 427 WQSEKDVINKLQSVKEEIDKVNLEIQQAERNYDLNRAAELKYGNLTDLHRRLEATERELS 486
Query: 519 GNQSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAV 567
Q +L E V IAE++S+WTGIP+++L ++EKE+L IG EAV
Sbjct: 487 QTQGTGKSLLREEVTEADIAEIISKWTGIPISKLVESEKEKLLHLEDELHHRVIGQDEAV 546
Query: 568 NAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEY 627
AVA+++ RSRAGL P +PT SF+FLGPTGVGKTELAKALA +FD E+ LVRIDMSEY
Sbjct: 547 TAVADAIQRSRAGLADPNRPTASFVFLGPTGVGKTELAKALASYMFDTEDALVRIDMSEY 606
Query: 628 MEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDG 687
ME+H+VSRLIGAPPGYVG+EEGGQLTE +RRRPY+V+LFDE+EKAH VFN LQ+LDDG
Sbjct: 607 MEKHAVSRLIGAPPGYVGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDG 666
Query: 688 RLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNR 747
R+TD QG TVDF+NT+IIMTSN+G++++L R +V++ +R FRPE LNR
Sbjct: 667 RVTDAQGHTVDFKNTIIIMTSNIGSQYILDIAGDNSRYDEMRHRVMEAMRNSFRPEFLNR 726
Query: 748 LDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARP 807
+DE+++F L ++LR++ +LQ++ + RL +R ++L ++D ALD + YDP++GARP
Sbjct: 727 IDEVIIFHSLDKKELRQIVQLQVERLKARLDDRKISLRLSDVALDFLAEVGYDPVFGARP 786
Query: 808 IRRWLEKKVVTELSRMLVREEIDENSTVYID 838
++R +++++ T++++ ++R E ++ T+++D
Sbjct: 787 LKRAIQRELETQIAKAILRGEFNDGDTIFVD 817
>gi|229195470|ref|ZP_04322238.1| Chaperone protein clpB 1 [Bacillus cereus m1293]
gi|423607027|ref|ZP_17582920.1| chaperone ClpB [Bacillus cereus VD102]
gi|228588010|gb|EEK46060.1| Chaperone protein clpB 1 [Bacillus cereus m1293]
gi|401241217|gb|EJR47609.1| chaperone ClpB [Bacillus cereus VD102]
Length = 866
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/874 (52%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|301052812|ref|YP_003791023.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Bacillus
cereus biovar anthracis str. CI]
gi|423577002|ref|ZP_17553121.1| chaperone ClpB [Bacillus cereus MSX-D12]
gi|300374981|gb|ADK03885.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus biovar anthracis str. CI]
gi|401206173|gb|EJR12966.1| chaperone ClpB [Bacillus cereus MSX-D12]
Length = 866
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/874 (52%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++++ ++L
Sbjct: 61 KQGAENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISIEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|347760901|ref|YP_004868462.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
gi|347579871|dbj|BAK84092.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
Length = 867
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/878 (52%), Positives = 619/878 (70%), Gaps = 31/878 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT ++ + A +A + Q TP HL ALL D G + I AGG+ A
Sbjct: 1 MNIEKFTERSRGFLQAAQTIAMRDYNQQLTPEHLLKALLDDEQGAASSLIRAAGGQVPAI 60
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRA-QAAQKAHGDTHLAVDQLILGLL 118
+A A+ KLP Q + A++ L++V+ A QAAQKA GD ++A D+L+ +
Sbjct: 61 TAAN--EAALAKLPKVQGSGAGQPTATSELVRVLDGAEQAAQKA-GDEYVAQDRLLAAIA 117
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
++ G + G ++ + +R +GR V+S + + F ALK Y RD+ E A
Sbjct: 118 ASETPAGQALRAGGATPQALEKAIATIR--KGRTVDSENAEANFDALKKYARDVTEVALQ 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++L+RR+KNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 176 GKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEALKN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LDMGALVAGAK+RGEFEERLKAVLKE+E AEG+VILFIDE+H ++GAGR++G+MD
Sbjct: 236 KKLLSLDMGALVAGAKFRGEFEERLKAVLKEIESAEGQVILFIDEMHTLVGAGRSDGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG L CIGATTL+EYRKY+EKDAA RRFQ VYV EP+V DT+SILRG+K
Sbjct: 296 ASNLIKPELARGVLHCIGATTLDEYRKYIEKDAALARRFQPVYVGEPTVADTISILRGIK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHG+RI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D
Sbjct: 356 EKYELHHGIRISDGALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQIDSKPEELDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE A+ KE D ASK RLV++ EL +L++K L + EK+R++ +++
Sbjct: 416 LDRRLIQLKIEREAIRKEDDAASKERLVKLEAELSELQEKSDALTAAWHAEKDRVNAVQK 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI--GQLEGNQ-SDENLMLTETV 532
L+++ +++ ++ A+R+ DLARA++L Y + +++A I Q E +Q S + M+++TV
Sbjct: 476 LQEEMDQVRSDIEIAQRKGDLARASELMYSRLPQLQAQIAKAQEEADQISKGDGMVSDTV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
IA VVSRWTG+PV R+ + E+ +L +G A+ AV+ +V R+RAGL
Sbjct: 536 TDQGIAAVVSRWTGVPVDRMLEGERAKLLRMEDELRKSVVGQEPALKAVSNAVRRARAGL 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTEL KALA LFDDE L+RIDMSE+ME+H+VSRL+GAPP
Sbjct: 596 QDPNRPIGSFLFLGPTGVGKTELCKALARFLFDDEKALLRIDMSEFMEKHAVSRLVGAPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRN
Sbjct: 656 GYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGRTVDFRN 715
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+I++TSNLG+E +L+ + ++ R +V+Q VR HFRPE LNRLDEI++F L
Sbjct: 716 TLIVLTSNLGSE-VLAHLPDGEAVESVRPEVMQVVRNHFRPEFLNRLDEIILFSRLQKAD 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ +Q+ + L ER + L + + + E YDP+YGARP++R +++ + L+
Sbjct: 775 MGKIVEIQIGRLRKLLDERNIQLRLDKGGEEWLANEGYDPVYGARPLKRVIQRALQNPLA 834
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDA 859
+L+ I + T+ +DA K D+L NG VDA
Sbjct: 835 GLLLEGTIHDGETITVDA--KDDHLTI----NGTEVDA 866
>gi|397737187|ref|ZP_10503860.1| ATP-dependent chaperone ClpB [Rhodococcus sp. JVH1]
gi|396926917|gb|EJI94153.1| ATP-dependent chaperone ClpB [Rhodococcus sp. JVH1]
Length = 877
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/862 (53%), Positives = 602/862 (69%), Gaps = 29/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
M+ T K+ EA+ A +AT GH + HL +AL+ G+ + + AG A
Sbjct: 1 MDTGSLTEKSREALQEAQNVATRMGHTEVDGEHLLLALVDQQEGLVPRLLEQAGANVDAL 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
ER ++ K+ P ++ + L K++ A+ K D++++V+ L++ L
Sbjct: 61 RSDLERELSR-RPKVSGPGATPGQVTITQRLAKLLDAAEREAKRLKDSYVSVEHLVMALS 119
Query: 119 ED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ- 174
E+ S G + GV + + K+RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 120 EEGSASAAGRVLASHGVTRDAFLTALTKVRGNQ--RVTSATPEGAYEALEKYGRDLVSEG 177
Query: 175 -AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
AGKLDPVIGRD EIRRV +ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP L
Sbjct: 178 RAGKLDPVIGRDTEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT--E 291
D + +LDMG+LVAGAKYRGEFEERL+AVL EV+ AEG+++LF+DE+H V+GAG E
Sbjct: 238 RDKTIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGRILLFVDELHTVVGAGSVGGE 297
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
GS+DA N+ KPMLARG+L IGATTL+EYRK++E DAA ERRFQ V V EPS D +SIL
Sbjct: 298 GSLDAGNMLKPMLARGELHMIGATTLDEYRKHIESDAALERRFQTVLVDEPSAEDAISIL 357
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RGL+E+ E HGV+IQD ALV A LS RYIT R LPDKAIDLVDEACA +R ++DS P
Sbjct: 358 RGLRERLEVFHGVKIQDGALVAAVTLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPA 417
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
E+D L RK +LEIE AL KE D ASKARL E+RKEL DLR + +++ E++ I
Sbjct: 418 ELDELTRKVTRLEIEEAALSKETDAASKARLEELRKELADLRAEADARHAQWEAERQAIR 477
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLM 527
++ L+ + E L +EAER YDL RAA+LRYG I + +EAA QL Q N +
Sbjct: 478 RVQELRGELERLRHEAEEAERNYDLNRAAELRYGEITALERRLEAAEEQLATRQG-RNPL 536
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLR 576
L E V D+IAE+V+ WTGIPV RL + E+E R++G EAV VA++V+R
Sbjct: 537 LREVVTEDEIAEIVAAWTGIPVARLQEGEREKLLKLDEILHERVVGQDEAVQLVADAVIR 596
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
+R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E+ +VR+DMSEY E+H+VSRL
Sbjct: 597 ARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQERHTVSRL 656
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
IGAPPGYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQVLDDGR+TD QGR
Sbjct: 657 IGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQ 716
Query: 697 VDFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFD 755
VDFRNTVIIMTSN+G++HLL G+ ++ ARD VL E+R HFRPE LNR+D+IV+F
Sbjct: 717 VDFRNTVIIMTSNIGSQHLLEGVTADGEIKPDARDWVLAELRGHFRPEFLNRVDDIVLFT 776
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PL+ Q+ + LQ+ D+ RL+ER + L +T A ++ +DP+YGARP+RR++ +
Sbjct: 777 PLTLPQIEHIVELQLTDLRNRLSERQIHLDITPEARRLIAEHGFDPVYGARPLRRYIAHE 836
Query: 816 VVTELSRMLVREEIDENSTVYI 837
V T++ R L+R EI+ T+ +
Sbjct: 837 VETKIGRALLRGEIEPGGTISV 858
>gi|423398009|ref|ZP_17375210.1| chaperone ClpB [Bacillus cereus BAG2X1-1]
gi|423408875|ref|ZP_17386024.1| chaperone ClpB [Bacillus cereus BAG2X1-3]
gi|401648684|gb|EJS66278.1| chaperone ClpB [Bacillus cereus BAG2X1-1]
gi|401657145|gb|EJS74657.1| chaperone ClpB [Bacillus cereus BAG2X1-3]
Length = 866
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/874 (51%), Positives = 627/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + ++TL +++ RA + D +++V+ ++L
Sbjct: 61 KQGTESL----IKKKPSVTGSGAEAGKLYITSTLQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTKFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTNSAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|300088401|ref|YP_003758923.1| ATP-dependent chaperone ClpB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299528134|gb|ADJ26602.1| ATP-dependent chaperone ClpB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 857
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/838 (53%), Positives = 605/838 (72%), Gaps = 24/838 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K +AI A LA + HAQ HL ++L++ G+ Q + G + +A
Sbjct: 1 MNIEKFTEKAQQAIFAAQRLAEDSRHAQIESEHLLLSLVAQEGGVVPQLLGKMGNQPSAI 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
+ + ++KLP + ++ S + +++ A+ D + + + + + +L+
Sbjct: 61 ADK--LQGELEKLP-KAYGVTQVFMSPNMKQILEAAEKETANFKDEYTSTEHIFIAILDK 117
Query: 120 DSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
D++ G + +EAG+ R+ + ++RG + +V + + +QAL+ YG DL E A G
Sbjct: 118 DNRAGGRILREAGITKDRLYQALTQIRGSQ--RVTDPNPEGKYQALEKYGHDLTEAARRG 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L +
Sbjct: 176 KLDPVIGRDEEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKNK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL++LDMG+LVAGAKYRGEFEERLKAVLKE++EA+G+ ILFIDE+H V+GAG EG+MDA
Sbjct: 236 RLVSLDMGSLVAGAKYRGEFEERLKAVLKEIQEAQGEYILFIDELHTVIGAGAAEGAMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+N+ KPMLARG+L IGATTL+EYRKYVEKDAA ERRFQ V V+EPSV D +SILRGLKE
Sbjct: 296 SNMLKPMLARGELHLIGATTLDEYRKYVEKDAALERRFQPVSVSEPSVEDAISILRGLKE 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI+D ALV AA LS RYI+ R LPDKAIDLVDEA A +R ++DS P E+D +
Sbjct: 356 RYEVHHGVRIKDTALVAAAVLSDRYISDRFLPDKAIDLVDEAAAKLRTEIDSVPTELDEV 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER+ +QLEIE AL+KEKD AS+ RL + KEL DL++K L +++ EKE I +++++
Sbjct: 416 ERRIIQLEIEREALKKEKDTASQERLGNLEKELADLKEKGAGLKTQWQNEKEDILKLQQI 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTETVGP 534
K++RE+ L +++AER DL RAA L+Y + E+E + + E E +L E V
Sbjct: 476 KEQREQTLHEIEKAERIGDLERAARLKYTTLAELEKQLKEQEIALVNGKEGQLLKEEVDD 535
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
+ IAEVV+RWTGIPV+RL + E + RL+G EA+ AVA S+ R+RAGL
Sbjct: 536 EDIAEVVARWTGIPVSRLMEGEIQKLLQMENRLRLRLVGQDEAIKAVANSIRRARAGLQD 595
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSF+FLGPTGVGKTELAKALAE +FDDE +VR+DMSEYME+H+VSRL+GAPPGY
Sbjct: 596 PNRPVGSFIFLGPTGVGKTELAKALAEFMFDDEKAMVRLDMSEYMEKHTVSRLVGAPPGY 655
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPYSVVL DE+EKAH VFNTLLQ+LDDGRLTDGQGRTVDF+NTV
Sbjct: 656 VGYEEGGHLTEAVRRRPYSVVLLDEIEKAHPDVFNTLLQILDDGRLTDGQGRTVDFKNTV 715
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++ + +G + +D+VL+ ++ FRPE LNR+DEIV+F LS E ++
Sbjct: 716 IIMTSNIGSQWIAE--LGTGHEEEMKDKVLEALKTSFRPEFLNRVDEIVIFHQLSWENIK 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
++ +Q + RLA R + + +TD A + + +DP YGARP++R ++++V+ L+
Sbjct: 774 RIVDIQFTGLKKRLAGRHLEVELTDEAREKLAEIGFDPAYGARPLKRAIQRQVLDPLA 831
>gi|257125508|ref|YP_003163622.1| ATP-dependent chaperone ClpB [Leptotrichia buccalis C-1013-b]
gi|257049447|gb|ACV38631.1| ATP-dependent chaperone ClpB [Leptotrichia buccalis C-1013-b]
Length = 856
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/864 (49%), Positives = 609/864 (70%), Gaps = 29/864 (3%)
Query: 6 FTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAERV 65
FT K+ EAI+ A+ A H+ HL +AL+ G+ + G + R
Sbjct: 5 FTQKSFEAISEANNFAIRYRHSDIKVEHLLLALVGQMDGLIPSVLKKMGIDTTDMI--RK 62
Query: 66 FNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGD 125
++ P E A++ L +V+ A+ K GD++++ + L L +++
Sbjct: 63 IESKLESFPKIEGGNSEPRANSELNRVLVGARDIAKKMGDSYISTEHLFLASYDNNS--- 119
Query: 126 LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIG 183
K+ G+ + ++ +E +RG GRK+ + + ++T++AL +G+DLVE A GKLDP+IG
Sbjct: 120 FLKDYGINKKQFETVLENVRG--GRKIMTDNPESTYEALDKFGKDLVELARKGKLDPIIG 177
Query: 184 RDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDM 243
RD EIRR ++ILSRR KNNP+LIGEPGVGKTA+ EG+AQRI++GDVP NL D + +LDM
Sbjct: 178 RDNEIRRAIQILSRRNKNNPILIGEPGVGKTAIAEGIAQRILKGDVPENLKDKTIFSLDM 237
Query: 244 GALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPM 303
GALVAGAKYRGEFEERLKAVL+E+E++EG++ILFIDE+H ++GAG+TEGSMDA NL KPM
Sbjct: 238 GALVAGAKYRGEFEERLKAVLEEIEKSEGRIILFIDEVHNIVGAGKTEGSMDAGNLLKPM 297
Query: 304 LARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHG 363
LARG+++ IGATT++EYRKY+EKDAA ERRFQ V V EP+V DT+SILRGLKEK+E HG
Sbjct: 298 LARGEIKVIGATTIDEYRKYIEKDAALERRFQPVMVDEPTVEDTISILRGLKEKFEIFHG 357
Query: 364 VRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQL 423
+RI D A+V AA +S RYI R LPDKAIDL+DEA A V+ +++S P E+D + R+ MQL
Sbjct: 358 IRITDNAIVTAATMSDRYINDRFLPDKAIDLIDEAAAKVKTEINSMPTELDEVTRRVMQL 417
Query: 424 EIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREEL 483
EIE ALEKEKD+ASK RLV + KEL +L +K +++ EK+ +++I+ + + E++
Sbjct: 418 EIEKVALEKEKDQASKDRLVTLEKELAELNEKKAAFKAQWESEKQEVEKIQNINTEIEKV 477
Query: 484 LFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQS-DENLMLTETVGPDQIAE 539
+ +A+R+ D + A+L+YG + E+E E NQ+ D N +L + + ++IAE
Sbjct: 478 KLQIADAQRKNDYNKLAELQYGKLPELEKQRADEEEKAKNQNPDANKLLKQEIDSEEIAE 537
Query: 540 VVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQPT 588
+V +WTGIPV++L Q E+E R+IG EA+ ++++++RSRAGL P +P
Sbjct: 538 IVGKWTGIPVSKLLQGEREKILHLAEQMMKRVIGQDEAITTISDTIIRSRAGLKDPNRPI 597
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
GSF+FLGPTGVGKT L K LA LFDDE ++RIDMSEYM++ S +RLIGAPPGYVG+EE
Sbjct: 598 GSFIFLGPTGVGKTYLTKTLAFNLFDDERNIIRIDMSEYMDKFSTTRLIGAPPGYVGYEE 657
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGRLTDG+G+ +DF+NT+IIMTS
Sbjct: 658 GGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQLLDDGRLTDGKGKVIDFKNTIIIMTS 717
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
N+G+E +L + ++ VL E++ F+PE LNR+D+I+VF L E ++ + L
Sbjct: 718 NIGSEIILEDPQ---VSEPTKEAVLNEMKHRFKPEFLNRIDDIIVFKALGKESVKNIISL 774
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
+ ++ +L E+ + + TD ALD ++ E+YDP YGARP++R+++K + T LS+M++ E
Sbjct: 775 ILDEINDKLKEQYIKIEFTDKALDYIVNEAYDPAYGARPLKRFVQKDIETNLSKMILSNE 834
Query: 829 IDENSTVYIDASPKGDNLVYRVQK 852
+ ENSTV +D+ G+ L+Y V+K
Sbjct: 835 VPENSTVVLDSD--GEKLIYDVKK 856
>gi|336371623|gb|EGN99962.1| hypothetical protein SERLA73DRAFT_180301 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384379|gb|EGO25527.1| hypothetical protein SERLADRAFT_465826 [Serpula lacrymans var.
lacrymans S7.9]
Length = 907
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/869 (51%), Positives = 610/869 (70%), Gaps = 42/869 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSG----------------IFAQ 48
+FT KT+ +IA AH+LA +AQ P H+A ALL++ +G +F+
Sbjct: 4 EFTDKTSSSIAAAHQLAKDYANAQVHPAHIASALLNEGAGEPSMPGGLSGGNSGASLFSS 63
Query: 49 AINNAGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHL 108
I AGG+ A +R + + +LP+Q P PDE+ S IKV+R AQ+ Q+ D+++
Sbjct: 64 VIQKAGGDPAI--IKRGLQKIIVRLPAQNPPPDEVTLSAGAIKVLREAQSLQQTMHDSYI 121
Query: 109 AVDQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYG 168
A D ++L L++DS I + KEA + A +K+ +++ RG R+VES S + F AL+ Y
Sbjct: 122 AQDHILLALVKDSTIAAVLKEASLTEASLKTAIQQTRGN--RRVESKSAEAGFDALQKYA 179
Query: 169 RDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVR 226
DL A GK+DPVIGRD EIRRV+RIL RRTKNNPVLIGEPGVGKT++ EGLAQRIV
Sbjct: 180 IDLTALAEEGKIDPVIGRDSEIRRVIRILCRRTKNNPVLIGEPGVGKTSIAEGLAQRIVN 239
Query: 227 GDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEA--EG-KVILFIDEIHL 283
DVP++L RL +LDMGAL+AGAKY+GE+EER+K+VL EVE++ EG VILFIDE+HL
Sbjct: 240 RDVPASLLS-RLYSLDMGALMAGAKYKGEYEERIKSVLNEVEKSTEEGVGVILFIDELHL 298
Query: 284 VL-GAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEP 342
++ G G G MDAANLFKP+LARG+LRCIGATTL EYRKY+E DAA ERRF QV V EP
Sbjct: 299 IMAGRGSEGGGMDAANLFKPLLARGKLRCIGATTLAEYRKYIETDAALERRFAQVLVNEP 358
Query: 343 SVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANV 402
SVP+T+SILRG++EKYE HHGVRI D AL+ AA L+ RY+T R LPD AIDLVDEACA+V
Sbjct: 359 SVPETISILRGIREKYEVHHGVRILDGALISAATLAHRYLTSRRLPDAAIDLVDEACASV 418
Query: 403 RVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMR 462
RV ++ PE ID L+R++++LE+E+HALE+EKD+ASK RLV RK + D+ ++LQPL
Sbjct: 419 RVTRETAPEAIDKLDRRKLELEVEIHALEREKDQASKDRLVTARKAIADVDEQLQPLKAA 478
Query: 463 YKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS 522
Y+ EK+R DE+ +++K +EL EAERRYDLA A+DLRY A+ ++++ + QL+ ++
Sbjct: 479 YEIEKKRGDEVNEVRRKIDELKAKADEAERRYDLATASDLRYYALPDLQSRLQQLQAKKA 538
Query: 523 DENLML---TETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVN 568
+E+ + T+TV P+QIAE+V RWT IPVTRL EKE+L +G EAV
Sbjct: 539 EEDETMGGGTDTVTPEQIAEIVGRWTSIPVTRLMSTEKEKLLRMERILAGSVVGQPEAVK 598
Query: 569 AVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYM 628
AVA ++ SR+GL Q+P SFL GP+G GKT L+K LA LFD + ++R+D SEY
Sbjct: 599 AVANAIRLSRSGLSNSQRPIASFLMAGPSGTGKTLLSKTLATLLFDSPDAMIRVDGSEYS 658
Query: 629 EQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGR 688
E+HS++RLIGAPPGYVGH+ GGQLTE VRR+PY ++L DE+EKA LQVLDDGR
Sbjct: 659 EKHSIARLIGAPPGYVGHDSGGQLTEYVRRKPYCIILIDEIEKASREFVTLFLQVLDDGR 718
Query: 689 LTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRL 748
LTDGQGR VDFRNTVIIMTSNLGA +L G V ++ V+ ++ HF PE +NR+
Sbjct: 719 LTDGQGRVVDFRNTVIIMTSNLGAMYLNDMGEGPVN-ATTKELVMSSIQAHFPPEFINRI 777
Query: 749 DEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPI 808
DE+V+F LS + + K+ L++K+V RLA+R + L + + A +++ Y YGARP+
Sbjct: 778 DEVVIFRTLSRKNVLKIVDLRLKEVQERLADRKMKLEIDNEAKQYLMSIGYSTTYGARPL 837
Query: 809 RRWLEKKVVTELSRMLVREEIDENSTVYI 837
R ++ +++ LS +L+ + + + TV +
Sbjct: 838 NRAIQSELLNPLSILLLSDRVRDGETVNV 866
>gi|86604906|ref|YP_473669.1| ATP-dependent chaperone protein ClpB [Synechococcus sp. JA-3-3Ab]
gi|86553448|gb|ABC98406.1| ATP-dependent chaperone protein ClpB [Synechococcus sp. JA-3-3Ab]
Length = 880
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/869 (52%), Positives = 626/869 (72%), Gaps = 31/869 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K AI + ++A Q HL ++LL G+ + AG +
Sbjct: 5 NPNQFTEKAWSAIVQSQDVARRHQQQQLETEHLLISLLDQEGGLTQTILQRAGLDP---- 60
Query: 62 AERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
R+ ++ +Q P D++ L + RA+ +K +GD ++V+ L+LG L
Sbjct: 61 --RLVRDRVESFINQQPKLARVDQLYLGRGLETTLDRAEEFRKEYGDDFISVEHLLLGSL 118
Query: 119 EDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D ++G + G+ V R+K ++++RGK+ +V + ++ ++AL+ YGRDL + A
Sbjct: 119 DDERVGKRVLAPLGLTVERLKPVIQQVRGKQ--RVTDKNPESRYEALERYGRDLTKAARE 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRI RGDVP +L +
Sbjct: 177 GKLDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRINRGDVPESLKN 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
R+IALDMG+L+AGAKYRGEFE+RLKAVLKEV E+EG++ILFIDE+H V+GAG EG+MD
Sbjct: 237 RRVIALDMGSLIAGAKYRGEFEDRLKAVLKEVTESEGQIILFIDELHTVVGAGAAEGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+LRCIGATTL+EYRK++EKDAA ERRFQ VYV +PSV DT+SILRGLK
Sbjct: 297 AGNLLKPMLARGELRCIGATTLDEYRKHIEKDAALERRFQPVYVDQPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+P E+D
Sbjct: 357 ERYELHHGVKISDSALVAAAVLSNRYISERFLPDKAIDLVDEAAAKLKMEITSKPVELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ MQL++E +L+KE D ASK RL ++ +EL +L ++ + L R++ EKE I+ ++
Sbjct: 417 IDRRIMQLQMEELSLKKEDDPASKERLGKIEQELANLMERQRELSARWQMEKEAIERLQN 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTET 531
LK +R+ + +++AE++YDL RAA+L+YG + E+E I + E + Q++ +L E
Sbjct: 477 LKAERDAVKLQIEQAEQKYDLNRAAELKYGKLMELERQIQEQEAHLAKLQANGEPLLREQ 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAG 580
V P+ IAE+VSRWTGIPVT L ++EK +R++G EAV AVA ++ R+RAG
Sbjct: 537 VTPEDIAEIVSRWTGIPVTSLMESEKQKLLRLEAHLHQRVVGQDEAVAAVAAAIRRARAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P GSFLF+GPTGVGKTELA+ALAE LFD +VRIDMSEYME+HSVSRLIGAP
Sbjct: 597 LKDPNRPIGSFLFMGPTGVGKTELARALAEFLFDTSEAMVRIDMSEYMEKHSVSRLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQL+EAVRRRPYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+
Sbjct: 657 PGYVGYEEGGQLSEAVRRRPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSN+G+E +L + + + QVL +R HFRPE LNR+DE+++F L+ E
Sbjct: 717 NTIIIMTSNIGSELILEIGGDESRYEEMKSQVLAMLRHHFRPEFLNRVDELIIFHALTKE 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q+R++ LQM+ V LA++ + + +T+ A D + YDP++GARP++R +++++ L
Sbjct: 777 QIRQIVSLQMRRVEQLLADQQIEIVLTEEAKDYLAELGYDPVFGARPLKRVIQREIENPL 836
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYR 849
+ L+ E + ++ + + L++R
Sbjct: 837 ATKLLENEFLPGDRILVEVA--NERLIFR 863
>gi|386838314|ref|YP_006243372.1| ATP-dependent Clp protease [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374098615|gb|AEY87499.1| ATP-dependent Clp protease [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451791606|gb|AGF61655.1| ATP-dependent Clp protease [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 879
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/863 (53%), Positives = 614/863 (71%), Gaps = 29/863 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T K+ EA+ A A G + HL +ALL G+ + + AG E
Sbjct: 1 MDMNRLTQKSQEALQEAQSAAVGMGQTEVDGEHLLLALLDQEDGLIPRLLRQAGTEPKEL 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
A + + + P T AP ++ + L +++ A+ K D +++V+ L+L L
Sbjct: 61 RA--AVREELSRRPKVTGPGAAPGQVFVTQRLSRLLDAAEREAKRLKDEYVSVEHLLLAL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ + G L K+ GV S + ++RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 119 AEEGSATAAGRLLKQHGVTRDSFLSALTQVRGNQ--RVTSANPEVAYEALEKYGRDLVLE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A G+LDPVIGRD EIRRV +ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP
Sbjct: 177 ARSGRLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMG+LVAGAKYRGEFEERLKAVL EV+ A+G+++LF+DE+H V+GAG EG
Sbjct: 237 LRDKTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQGRILLFVDELHTVVGAGAAEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L IGATTL+EYR+++EKDAA ERRFQQV V EPSV DT+SILR
Sbjct: 297 AMDAGNMLKPMLARGELHMIGATTLDEYRQHIEKDAALERRFQQVLVDEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E+ E HGV+IQD ALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 357 GLRERLEVFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ +LEIE AL KE D AS+ RL E+RKEL DLR + +++ E++ I
Sbjct: 417 LDEITRRVTRLEIEEAALSKETDAASRTRLEELRKELADLRGEADAKRAQWEAERQAIRR 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVE----AAIGQLEGNQSDENLML 528
++ L+Q+ E++ +EAER YDL RAA+LRYG +Q++E A QL Q +N +L
Sbjct: 477 VQELRQELEQVRHEAEEAERAYDLNRAAELRYGRLQDLERRLKAEEEQLAVKQG-QNRLL 535
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRS 577
E V ++IAE+V+ WTGIPV RL + E +ER+IG EAV VA++++R+
Sbjct: 536 REVVTEEEIAEIVAAWTGIPVARLQEGEREKLLRLDEILRERVIGQDEAVKLVADAIIRA 595
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E +VR+DMSEY E+H+VSRL+
Sbjct: 596 RSGIRDPRRPIGSFIFLGPTGVGKTELAKTLAAALFDSEENMVRLDMSEYQERHTVSRLM 655
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGY+G+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQVLDDGR+TD QGRTV
Sbjct: 656 GAPPGYIGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQVLDDGRITDSQGRTV 715
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
DFRNTVIIMTSN+G+E+LL G + ++ AR V+ E+R HFRPE LNR+D+IV+F P
Sbjct: 716 DFRNTVIIMTSNIGSEYLLDGATAEGEIKPDARALVMGELRGHFRPEFLNRVDDIVLFKP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L Q+ ++ LQ ++ RLAER + + +T+AA +++ + YDP+YGARP+RR++ +V
Sbjct: 776 LGERQIERIVELQFDELRRRLAERRITVELTEAARELIAHQGYDPVYGARPLRRYISHEV 835
Query: 817 VTELSRMLVREEIDENSTVYIDA 839
T + R L+R ++ + +TV +DA
Sbjct: 836 ETMVGRALLRGDVQDGATVRVDA 858
>gi|228919991|ref|ZP_04083345.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228839704|gb|EEM84991.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 866
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/874 (52%), Positives = 624/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
GK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRVGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL ++ EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQHELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAANEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|17065040|gb|AAL32674.1| heat shock protein 101 [Arabidopsis thaliana]
Length = 460
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/459 (90%), Positives = 442/459 (96%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP+KFTHKTNE IA AHELA +AGHAQFTPLHLA AL+SDP+GIF QAI++AGGENAAQ
Sbjct: 1 MNPEKFTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQAISSAGGENAAQ 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
SAERV NQA+KKLPSQ+P PD+IPAS++LIKVIRRAQAAQK+ GDTHLAVDQLI+GLLED
Sbjct: 61 SAERVINQALKKLPSQSPPPDDIPASSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGLLED 120
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDP 180
SQI DL E GVA ARVKSE EKLRGKEG+KVESASGDT FQALKTYGRDLVEQAGKLDP
Sbjct: 121 SQIRDLLNEVGVATARVKSEFEKLRGKEGKKVESASGDTNFQALKTYGRDLVEQAGKLDP 180
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVP++L DVRLI+
Sbjct: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLTDVRLIS 240
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LDMGALVAGAKYRGEFEERLK+VLKEVE+AEGKVILFIDEIHLVLGAG+TEGSMDAANLF
Sbjct: 241 LDMGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTEGSMDAANLF 300
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDT+SILRGLKEKYEG
Sbjct: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEKYEG 360
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HHGVRIQDRAL+ AAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
Sbjct: 361 HHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPL 459
MQLEIELHALE+EKDKASKARL+EVRKELDDLRDKLQPL
Sbjct: 421 MQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPL 459
>gi|152974698|ref|YP_001374215.1| ATPase [Bacillus cytotoxicus NVH 391-98]
gi|152023450|gb|ABS21220.1| ATPase AAA-2 domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 866
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/861 (52%), Positives = 617/861 (71%), Gaps = 29/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLKQQDGLAVRIFQKMNVNIEQL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
+ E + ++K PS T + E + + L +++ +A+A K D +++V+ ++L
Sbjct: 61 TKEVETL----IQKKPSVTGSGIEAGKLYITGALQQLLVKAEAEAKKLQDEYISVEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E++ + LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFCEETGDVNRLFSNFRITKDTLLQSLMAVRGNQ--RVTSQNPEVTYEALEKYGRDLVAE 174
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
GK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VKQGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRALV A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRALVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL ++ EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQHELSDLKEVASGMRAQWEKEKEEIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++K E L L+EAE YDL +AA+LR+G I EVE + E + +EN +L
Sbjct: 475 VRNLREKLERLRRELEEAEGNYDLNKAAELRHGKIPEVEKELKVAEEAGTHHENENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA +VSRWTGIPV +L G+ EK ER+IG EAV+ VA++VLR+R
Sbjct: 535 EEVSEEEIANIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVADAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMM-GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ +LL G+ + ARD V+ E+R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAYLLEGLQENGAIKEEARDLVMGELRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RL ER + +A+T++A + ++ +DP+YGARP++R++++++
Sbjct: 775 TTHEIKGIVDKIVKELQGRLVERHITVALTESAKEFIVESGFDPMYGARPLKRYVQRQIE 834
Query: 818 TELSRMLVREEIDENSTVYID 838
T+L+R L+ I +NS V +D
Sbjct: 835 TKLARELIAGTIIDNSHVVVD 855
>gi|346309848|ref|ZP_08851916.1| chaperone ClpB 2 [Dorea formicigenerans 4_6_53AFAA]
gi|345897276|gb|EGX67201.1| chaperone ClpB 2 [Dorea formicigenerans 4_6_53AFAA]
Length = 861
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/856 (51%), Positives = 611/856 (71%), Gaps = 25/856 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + +A+ ++A G+ + HL ALL+ + A+ + G +
Sbjct: 1 MNINKFTQNSLQAVQNCEKIAMDYGNQELAQEHLLYALLTQDDSLIAKLMEKMGLDKN-M 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
RV ++++KLP + L V+ A+ K GD +++V+ L L +++
Sbjct: 60 VINRV-EESLRKLPKVQGGQQYV--GQALNNVLVHAEDEAKQMGDEYVSVEHLFLAMIKY 116
Query: 121 S--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ ++ + +E G++ + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 117 AGKEMKSILRELGISRDGFLQALSSVRGNQ--RVTSDNPEATYDTLNKYGSDLVERAREQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 175 KLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMGALVAGAKYRGEFEERLKAVL+EV+ ++GK+ILFIDE+H ++GAG+T+G+MDA
Sbjct: 235 TIFSLDMGALVAGAKYRGEFEERLKAVLEEVKNSDGKIILFIDELHTIVGAGKTDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V D +SILRGLKE
Sbjct: 295 GNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVEEPTVEDAISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D L
Sbjct: 355 RYEVFHGVKITDGALVAAATLSDRYISDRFLPDKAIDLVDEACALIKTELDSMPTELDEL 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK MQLEIE AL+KE+D+ SK RL +++EL +LR + ++ EK ++ ++RL
Sbjct: 415 NRKIMQLEIEETALKKEEDRLSKERLEHLQQELAELRAEFAGKKAQWDNEKVGVERVQRL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+++ E++ +++A+ YDL +AA+L+YG + +++ + Q E DE+L L E+V +
Sbjct: 475 REEIEQVNKDIEKAQHSYDLDKAAELQYGKLPQLQKQLEQEEEKVKDEDLSLVHESVTDE 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA +VSRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+ P
Sbjct: 535 EIARIVSRWTGIPVAKLNESERNKTLHLADELHKRVIGQDEGVELVTEAIIRSKAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALA LFDDEN +VRIDMSEYME++SVSRLIGAPPGYV
Sbjct: 595 TKPIGSFLFLGPTGVGKTELAKALAASLFDDENNMVRIDMSEYMEKYSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT++
Sbjct: 655 GYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTIL 714
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+++LL GM G ++ + ++ V+ ++R HFRPE LNRLDE ++F PL+ + +
Sbjct: 715 IMTSNIGSQYLLDGMDDHGNISEE-SQTMVMNDLRAHFRPEFLNRLDETIMFKPLTKDNI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L + DV RLA+R + + +T+ A +++ YDP YGARP++R+L+K V T ++
Sbjct: 774 YDIIDLLVADVNKRLADREIQIKLTEEAKKMIVDGGYDPNYGARPLKRYLQKNVETLAAK 833
Query: 823 MLVREEIDENSTVYID 838
++++ +I T+ ID
Sbjct: 834 LMLQGDIGTGDTIVID 849
>gi|315498625|ref|YP_004087429.1| ATP-dependent chaperone clpb [Asticcacaulis excentricus CB 48]
gi|315416637|gb|ADU13278.1| ATP-dependent chaperone ClpB [Asticcacaulis excentricus CB 48]
Length = 859
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/861 (51%), Positives = 600/861 (69%), Gaps = 23/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ KT + I A +A S H FTPLHL AL D + I AGG A
Sbjct: 1 MNIEKYSEKTQKLIQSAQAIAQSRNHQYFTPLHLLKALSEDRESVARPLIERAGGRPEAF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ + KLPS T ++ K A+ GD + D+L++ L +
Sbjct: 61 VG--AVDATLNKLPSVTGGTQQLYMHNDTAKAFTDAENDANKAGDAFVTADRLLVAALNN 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
S L K AG ++ +K ++ R +G+ S++ + F AL Y RDL + A GK+
Sbjct: 119 SDGAALLKAAGTSLGALKDAQKEFR--KGKPANSSNAEAGFDALNKYARDLTQAALDGKI 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRR +++L+RRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D +L
Sbjct: 177 DPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPESLKDKKL 236
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
++LDMGAL+AGAKYRGEFEERLK+VL EV +AEG+++LFIDE+H ++GAG+++G+MDA+N
Sbjct: 237 LSLDMGALIAGAKYRGEFEERLKSVLNEVTQAEGQIVLFIDEMHTLVGAGKSDGAMDASN 296
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KP LARG+L C+GATTL+EY+K+VEKD A RRFQ V+V EP+V DT+SILRGLKEKY
Sbjct: 297 LLKPALARGELHCVGATTLDEYQKHVEKDPALARRFQPVFVQEPTVEDTISILRGLKEKY 356
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D A+V AA LS RYI R LPDKAIDL+DEA + VR+ +DS+PEE+D L+R
Sbjct: 357 EVHHGVKISDSAIVAAATLSNRYIADRFLPDKAIDLIDEAGSRVRMAVDSKPEELDELDR 416
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+ +QL+IE AL+KE D+ SK RL ++ +EL DL K L R++ EK+++ R ++
Sbjct: 417 RIVQLKIEREALQKESDQGSKTRLEKLNEELGDLEGKSAHLTARWQSEKDKVGAASRARE 476
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+ LQ A+R DL RA+++ YG I ++E + + E N S+E + E V QIA
Sbjct: 477 ALDRARIELQSAQRSGDLQRASEILYGQIPQLEKMVAEAETN-SEEAPLTPEVVDSAQIA 535
Query: 539 EVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQP 587
+VVSRWTGIPV ++ + E+++L +G EA+ AV+++V R+RAGL P +P
Sbjct: 536 QVVSRWTGIPVDKMMEGERDKLLRMEDELRKRVVGQDEALEAVSDAVRRARAGLKDPNRP 595
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
GSFLFLGPTGVGKTEL KALAE LFDDE + R+DMSEYME+H+VSR+IGAPPGYVG++
Sbjct: 596 IGSFLFLGPTGVGKTELNKALAEFLFDDETAITRLDMSEYMEKHAVSRMIGAPPGYVGYD 655
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGR VDFRNT+I+MT
Sbjct: 656 EGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRVVDFRNTLIVMT 715
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLG+++L++ M +++ R V+ EV++HFRPE LNR+DE ++F L Q+ + R
Sbjct: 716 SNLGSQYLVN-MEDDQDVEMVRGLVMDEVKRHFRPEFLNRIDETILFHRLGRAQMGNIVR 774
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS-RMLVR 826
+Q+K + L +R + LA+ DAAL+ + Y+P YGARP++R ++K++V ++ R+LV
Sbjct: 775 IQLKGLEKLLKDRQMTLAIDDAALNHLAELGYEPAYGARPLKRVIQKQLVDAIAKRILVG 834
Query: 827 EEIDENSTVYIDASPKGDNLV 847
D + I S GD+LV
Sbjct: 835 AFADGD---VISVSFDGDHLV 852
>gi|389742320|gb|EIM83507.1| hypothetical protein STEHIDRAFT_101770 [Stereum hirsutum FP-91666
SS1]
Length = 907
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/872 (51%), Positives = 605/872 (69%), Gaps = 41/872 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSG--------------IF 46
++ D FT K ++A A +LA HAQ P HLA LL++ +G +F
Sbjct: 3 LSLDAFTDKAQASVAAALQLAKDYSHAQLYPAHLAFVLLNEGAGDTAAPGGVSHAQTPLF 62
Query: 47 AQAINNAGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDT 106
A I AGG+ +R + + +LPSQ+PAP+E+ S+ KV+R AQ+ K D+
Sbjct: 63 ASVIQKAGGD--VSLVKRALQKLIVRLPSQSPAPEEVSLSSEAAKVLREAQSLSKTMHDS 120
Query: 107 HLAVDQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKT 166
++A D ++L L++ S I + KEA + A +K+ +E++RG R+VES + F AL
Sbjct: 121 YVAQDHILLALIKSSSIAPVLKEASLTDAALKTAIEQIRGN--RRVESRQAEQGFDALNK 178
Query: 167 YGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRI 224
Y DL A GK+DPVIGRD EIRRV+RIL RRTKNNPVLIGEPGVGKT++ EGLAQRI
Sbjct: 179 YAVDLTALAEEGKIDPVIGRDNEIRRVIRILCRRTKNNPVLIGEPGVGKTSIAEGLAQRI 238
Query: 225 VRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGK----VILFIDE 280
V DVP++L RL +LDMGAL+AGAKY+GE+EER+KAVL EVE++ + VILFIDE
Sbjct: 239 VNRDVPASLI-ARLYSLDMGALMAGAKYKGEYEERVKAVLNEVEKSSEEDGPGVILFIDE 297
Query: 281 IHLVL-GAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYV 339
+HL++ G G G MDAANLFKP+LARG+LRCIGATTL EYRKY+E DAA ERRF QV V
Sbjct: 298 LHLIMAGKGSEGGGMDAANLFKPLLARGKLRCIGATTLAEYRKYIETDAALERRFAQVIV 357
Query: 340 AEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEAC 399
EPSV +T+SILRG++EKYE HHGVRI D AL+ AA L+ RY+T R LPD AIDLVDEAC
Sbjct: 358 NEPSVTETISILRGIREKYEVHHGVRILDGALISAATLAHRYLTSRRLPDAAIDLVDEAC 417
Query: 400 ANVRVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPL 459
A+VRV ++ PE ID L+R++++LE+E+HALE+EKD+ASK RLV RK + + ++L+P+
Sbjct: 418 ASVRVTRETAPEAIDKLQRRKLELEVEIHALEREKDEASKERLVTARKAISQVEEELRPM 477
Query: 460 MMRYKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG 519
+ Y+ EK R DE+ ++++K +EL +EAERRYDLA A+DLRY AI +++ + QL
Sbjct: 478 VAAYENEKSRGDEVNQVRRKIDELKAKAEEAERRYDLATASDLRYYAIPDLQKRLDQLVA 537
Query: 520 NQSDENLM---LTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAE 565
+++E+ ++TV P+QI+E+VSRWT IPVTRL EKE+L +G E
Sbjct: 538 KKAEEDAQGGSGSDTVTPEQISEIVSRWTSIPVTRLLSTEKEKLLRMEKILAENVVGQPE 597
Query: 566 AVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMS 625
AV AVA ++ SR+GLG Q+P SFL GP+G GKT L+K LA LFD + ++RID S
Sbjct: 598 AVKAVANAIRLSRSGLGNAQRPIASFLMAGPSGTGKTLLSKTLATLLFDSPDAMIRIDGS 657
Query: 626 EYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLD 685
EY E+HS+SRLIGAPPGYVGH++GG LTE VRR+PY +VL DE+EKA LQVLD
Sbjct: 658 EYSEKHSISRLIGAPPGYVGHDQGGALTEYVRRKPYCIVLIDEIEKAAREFVTLFLQVLD 717
Query: 686 DGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELL 745
DGRLTDGQGR VDFRNTVI+MTSNLGA +L G V + R+ V+ ++ HF PE +
Sbjct: 718 DGRLTDGQGRVVDFRNTVIVMTSNLGAAYLNDMGEGPVKKET-RELVMGAIQVHFPPEFI 776
Query: 746 NRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGA 805
NR+D+IV+F LS + K+ +++ +V RL +R + L + D A + +++ Y PIYGA
Sbjct: 777 NRIDDIVIFRTLSRRNVMKIIDIRLAEVQQRLVDRKMTLNIDDEAKNYLVSIGYSPIYGA 836
Query: 806 RPIRRWLEKKVVTELSRMLVREEIDENSTVYI 837
RP+ R ++ +++ LS ML+ +++ + V +
Sbjct: 837 RPLNRAIQTELLNPLSVMLLADKVRDGEVVRV 868
>gi|295690764|ref|YP_003594457.1| ATP-dependent chaperone Clpb [Caulobacter segnis ATCC 21756]
gi|295432667|gb|ADG11839.1| ATP-dependent chaperone ClpB [Caulobacter segnis ATCC 21756]
Length = 859
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/855 (51%), Positives = 599/855 (70%), Gaps = 29/855 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN D ++ + +A+ A LA + GH QF P H+ LL + G+ I +AGG
Sbjct: 1 MNIDLYSDRAKQAVQSAQSLALARGHQQFAPEHILKVLLEEKDGLSRALIQSAGGRPDQ- 59
Query: 61 SAERVFNQAMKKLPSQTPAPD----EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILG 116
+ ++ L ++TP D ++ +V A+ A K GD + ++L++
Sbjct: 60 -----LDGGVETLLAKTPRVDGAGGQLYMKPDTARVFAEAEKAAKTSGDAFVTTERLLIA 114
Query: 117 LL-EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
+ E + LFKEAGV+ +++ +R +GR +SA+ + + ALK Y RDL + A
Sbjct: 115 IAKEGGEAAKLFKEAGVSAQSLETAANAVR--KGRTADSANAEEGYDALKRYARDLTQAA 172
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L
Sbjct: 173 RDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESL 232
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +L++LDMG+L+AGAKYRGEFEERLKAVL E AEG +ILFIDE+H ++GAG+T+G+
Sbjct: 233 KDKKLLSLDMGSLIAGAKYRGEFEERLKAVLAETTAAEGSIILFIDEMHTLVGAGKTDGA 292
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DT+SILRG
Sbjct: 293 MDASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRG 352
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKEKYE HHGVRI D A+V AA LS RYI R LPDKAIDLVDEA + VR+Q+DS+PEE+
Sbjct: 353 LKEKYEVHHGVRISDSAIVAAATLSNRYIADRFLPDKAIDLVDEASSRVRMQIDSKPEEL 412
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D ++R+ +QL+IE AL KE D AS+ RL + E+DDL+ + + ++K EKE++
Sbjct: 413 DEIDRRLVQLKIEREALSKETDAASRQRLENLETEIDDLQFRSDEMTAKWKAEKEKVGGA 472
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVG 533
+ ++ + L L A+R D ARA ++YG I +E + + E + D + E V
Sbjct: 473 AQAREALDRLRADLANAQRAGDFARAGQIQYGEIPALEKRLAEAE--EGDTQALTPEVVD 530
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
+QIA VVSRWTG+PV ++ + E++ R++G EA+ AV+++V R+RAGL
Sbjct: 531 AEQIAAVVSRWTGVPVEKMLEGERDKLLKMEDQLRGRVVGQDEALEAVSDAVRRARAGLQ 590
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTEL K+LAE LF DE + R+DMSEYME+HSVSRLIGAPPG
Sbjct: 591 DPSKPIGSFLFLGPTGVGKTELTKSLAEFLFADEAAITRMDMSEYMEKHSVSRLIGAPPG 650
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 651 YVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNT 710
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IIMTSNLGAE+L + G+ ++ R V+ VR HFRPE LNR+DEI++F LS +
Sbjct: 711 LIIMTSNLGAEYLANQEEGE-DVEAVRPMVMNTVRGHFRPEFLNRIDEIILFKRLSRHNM 769
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ R+Q++ V LA+R ++LA+ AL+ + + YDP+YGARP++R ++K++V +++
Sbjct: 770 GDIVRIQLQRVEKLLADRRMSLALDAEALNWLADKGYDPVYGARPLKRVIQKELVDPIAK 829
Query: 823 MLVREEIDENSTVYI 837
L+ EI++ + +
Sbjct: 830 KLLAGEIEDGGVIAV 844
>gi|255505776|ref|ZP_05348096.3| ATP-dependent chaperone protein ClpB [Bryantella formatexigens DSM
14469]
gi|255265998|gb|EET59203.1| ATP-dependent chaperone protein ClpB [Marvinbryantia formatexigens
DSM 14469]
Length = 879
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/856 (51%), Positives = 609/856 (71%), Gaps = 25/856 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ +AI ++A G+ + HL AL++ + + I E
Sbjct: 19 MNINKFTQKSLQAINDLEKVAYEYGNQEIEEEHLLYALMNQEDSLIKKLI-----EKMEI 73
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ N + L +T P L +V+ A+ KA GD +++V+ L L L+
Sbjct: 74 QPQYFANAVISALEKRTKVSGGQPYIGNDLNQVLVSAEDEAKAMGDEYVSVEHLFLALIR 133
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ + ++F+E G+ R + +RG + +V S + + T+ LK YG++LVE+A
Sbjct: 134 HPNKAVKEIFREFGITRERFLQALSTVRGNQ--RVTSDNPEATYDTLKKYGQELVEKARQ 191
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L +
Sbjct: 192 QKLDPVIGRDTEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLKN 251
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
++ +LDMGALVAGAKYRGEFEERLKAVL++V +++G++ILFIDE+HL++GAG+T+G+MD
Sbjct: 252 KKIFSLDMGALVAGAKYRGEFEERLKAVLEDVRKSDGEIILFIDELHLIVGAGKTDGAMD 311
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRGLK
Sbjct: 312 AGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVDEPTVEDTISILRGLK 371
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
++YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ ++DS P E+D
Sbjct: 372 DRYEVYHGVKITDGALVAAATLSDRYISDRFLPDKAIDLVDEACALIKTEMDSMPTELDE 431
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L R+ MQ+EIE AL+KE DK S+ RL ++KEL +L+D+ + ++ EK ++ + +
Sbjct: 432 LRRRVMQMEIEEAALKKETDKLSQDRLANLQKELAELKDEFANMKAQWDNEKSAVENLSK 491
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
L+++ E + +++A+R YDL RAA L+YG + +++ + E +++L L E+V
Sbjct: 492 LREQIEAMNKEIEKAQREYDLNRAAQLQYGELPKLQQQLAIEEEKVKNKDLSLVHESVTE 551
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++I+ ++SRWTGIPV +L ++E+ +R+IG + V V ++++RS+AG+
Sbjct: 552 EEISRIISRWTGIPVAKLTESERSKILNLSGELHKRVIGQDDGVQKVTDAIIRSKAGIKD 611
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLF+GPTGVGKTELAKALA+ LFDDE +VRIDMSEYME++SVSRLIGAPPGY
Sbjct: 612 PTKPIGSFLFMGPTGVGKTELAKALAQSLFDDEQNMVRIDMSEYMEKYSVSRLIGAPPGY 671
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 672 VGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTI 731
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IMTSN+G+ +LL G+ T++ + V+ ++R HFRPE LNRLDEI++F PL+ E +
Sbjct: 732 LIMTSNIGSTYLLEGIEDDGTIKPECEELVMNDLRAHFRPEFLNRLDEIIMFKPLTRENI 791
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L M D+ RLA + ++L +TDAA V+ Y+P+YGARP++R+L+K V T +R
Sbjct: 792 GHIIDLMMADLNRRLASQDISLQLTDAAKAFVIDGGYEPMYGARPLKRFLQKNVETLAAR 851
Query: 823 MLVREEIDENSTVYID 838
++ E+ + ID
Sbjct: 852 EILSGEVRGGDVITID 867
>gi|336428180|ref|ZP_08608165.1| chaperone ClpB [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336006933|gb|EGN36964.1| chaperone ClpB [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 868
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/856 (52%), Positives = 614/856 (71%), Gaps = 25/856 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EA+ +LA G+ + HL +LL+ + + I G +
Sbjct: 1 MNISKFTQKSMEAVERCQKLAYEYGNQEIEEEHLLYSLLTIEDSLILKLIEKMGIQKE-H 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
RV N K++ Q ++ L +V+ A+ K GD +++V+ L L +++
Sbjct: 60 FVNRVENAVSKRVKVQG---GQVYVGRELNQVLTSAEDEAKQMGDEYVSVEHLFLSMIKH 116
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ +I +++ E G+ R + +RG + +V S + + T+ L+ YG DLVE+A
Sbjct: 117 PNKEIKEIWTEYGITRERFLQALSTVRGNQ--RVTSDNPEATYDTLEKYGEDLVEKARNQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR VVRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 175 KLDPVIGRDAEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPQGLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
++ ALDMGALVAGAKYRGEFEERLKAVL++V+ +EG++ILFIDE+H ++GAG+TEGSMDA
Sbjct: 235 KIFALDMGALVAGAKYRGEFEERLKAVLEDVKNSEGQIILFIDELHTIVGAGKTEGSMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRGLKE
Sbjct: 295 GNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVEEPTVEDTISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D L
Sbjct: 355 RYEVYHGVKIMDNALVSAAVLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELDEL 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK MQ+EIE AL+KE+D+ S+ RL +++KEL +L+++ Q ++ EK +D++ +L
Sbjct: 415 QRKIMQMEIEEAALKKEEDRLSQERLADLQKELAELKEEFQNRKAQWDNEKASVDKLSKL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+++ + + ++ A+R DL +AA L YG + E+ + E E+L L E+V D
Sbjct: 475 REQIDSVNSQIEIAQREGDLEKAAQLSYGQLPELRKQLEIEEETVKSEDLSLVHESVSED 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA +VSRWTGIP+++L ++E+ +R++G E V V E+++RS+AG+ P
Sbjct: 535 EIARIVSRWTGIPISKLTESERNKTLHLDEELHKRVVGQDEGVTKVTEAIIRSKAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALA LFDDEN +VRIDMSEYME++SVSRLIGAPPGYV
Sbjct: 595 SKPIGSFLFLGPTGVGKTELAKALAAALFDDENNMVRIDMSEYMEKYSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT++
Sbjct: 655 GYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTIL 714
Query: 705 IMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+GA +LL G+ G ++ + + V+ ++R HFRPE LNRLDEI++F PL+ + +
Sbjct: 715 IMTSNIGANYLLEGISQDGMISEETEK-FVMSDLRGHFRPEFLNRLDEIILFKPLTKDNI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +L + D+ RL++R + + +T AA V+ +YDP YGARP++R+++K V T ++
Sbjct: 774 AGIIQLIIGDLNKRLSDRELTIELTPAAEQFVVDNAYDPAYGARPLKRYIQKHVETLSAK 833
Query: 823 MLVREEIDENSTVYID 838
+++++ + E T+ ID
Sbjct: 834 LILQDAVGEGDTILID 849
>gi|405354006|ref|ZP_11023415.1| ClpB protein [Chondromyces apiculatus DSM 436]
gi|397092697|gb|EJJ23446.1| ClpB protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 874
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/865 (52%), Positives = 606/865 (70%), Gaps = 31/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DK+T K EAI LA A + Q+ P HLA ALL GI + G +
Sbjct: 1 MRLDKYTVKAQEAIQEGQTLARRADNPQYEPEHLAAALLGQKDGIVEPLLRKIGADVKLF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+A +A++KLP + L+K +A+ K+ D ++ + L+L L D
Sbjct: 61 AAR--LGEALQKLPRMQGGESAM-LGQRLLKTFDKAEDEAKSLKDEFISSEHLLLALTHD 117
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+G++ K +GV RV S ++++RG GR V S ++T+QAL+ YGRDL + A GK
Sbjct: 118 KGAVGEVMKSSGVTRERVLSGLKEVRGS-GR-VTSQDAESTYQALEKYGRDLTDAARSGK 175
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA+RIV GDVP L + R
Sbjct: 176 LDPVIGRDEEIRRCIQVLSRRTKNNPVLIGEPGVGKTAIAEGLARRIVDGDVPEGLKNKR 235
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L++LD+GA+VAGAKYRGEFEERLKAVLKE+ +A G+VILFIDE+H ++GAG+ EG+MDA
Sbjct: 236 LVSLDLGAMVAGAKYRGEFEERLKAVLKEIADAAGEVILFIDELHTLVGAGKAEGAMDAG 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L CIGATTL+EYRK++EKDAA ERRFQ V V EPSV DT+SILRGLKE+
Sbjct: 296 NMLKPALARGELHCIGATTLDEYRKHIEKDAALERRFQPVMVGEPSVHDTISILRGLKER 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRIQD ALV AA LS RYI R LPDKAIDLVDEA + +R+++DS P E+D++
Sbjct: 356 YEVHHGVRIQDNALVAAATLSHRYIADRFLPDKAIDLVDEASSRLRIEIDSMPTELDDVR 415
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK QL+IE L KE D S+ RL ++ KEL +L +K L + + EK I IR LK
Sbjct: 416 RKMTQLQIEREGLRKETDLHSQERLGQIEKELANLSEKFNALKVHWDAEKSAIGAIRALK 475
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAI----QEVEA---AIGQLEGNQSDENLMLTE 530
+K+E+ AER+ DL RAA+L++G I +E++A + +L+ NQ L E
Sbjct: 476 EKQEKAKNDQAAAERQGDLNRAAELKFGVIPSLDKELKAQNEKLAELQKNQK----FLKE 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRA 579
V + IAEVV++WTGIPV+RL + E +R+IG A+ AV+ +V R+R+
Sbjct: 532 EVDAEDIAEVVAKWTGIPVSRLMEGEVQKLVHMEDRLAKRVIGQRSAIEAVSNAVRRARS 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P GSF+FLGPTGVGKTE AKALAE LFDD++ +VRIDMSEYME+HSV+RL+GA
Sbjct: 592 GLQDPNRPIGSFIFLGPTGVGKTETAKALAEFLFDDDSAMVRIDMSEYMEKHSVARLVGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRRRPY+VVLFDE+EKAH VFN LLQ+LD+GRLTD QGRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAVRRRPYTVVLFDEIEKAHHDVFNVLLQILDEGRLTDSQGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTV+I+TSNLG++ + +GM GK + + R++V+ +R HFRPE LNR+DE+V+F+PL
Sbjct: 712 KNTVLILTSNLGSQDIQAGMAGKEELDERTREEVMDALRSHFRPEFLNRVDEVVIFEPLR 771
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
+ + ++ LQ+ ++ LA++ + L +T+ A +++ YDP YGARP++R ++K ++
Sbjct: 772 KKDIYRIVDLQLARLSKLLADKRLTLELTEKARELLAERGYDPTYGARPLKRAVQKNLLD 831
Query: 819 ELSRMLVREEIDENSTVYIDASPKG 843
L+ ++ E + DA P G
Sbjct: 832 PLALKVLGGEFVPGDHIQADAGPDG 856
>gi|375007742|ref|YP_004981375.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359286591|gb|AEV18275.1| hypothetical protein GTCCBUS3UF5_9540 [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 861
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/854 (53%), Positives = 610/854 (71%), Gaps = 21/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ + T K EA+ A LA H Q HL +ALL G+ + + +G + +
Sbjct: 1 MDASRLTEKLQEALMAAQSLAKERHHQQLDVEHLLIALLEQEGGLAPRLVELSGADK--E 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
A +++ P A ++ + L +++ A+ K D +++V+ ++L L
Sbjct: 59 KAADWLRSQLRQKPEVHGADGQLYVAPALARLLEEAENEAKRMQDEYISVEHVLLALPHG 118
Query: 121 SQ-IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
++ + G+ + + V +RG + +V S + T++AL YGRDLV +A GK
Sbjct: 119 AEPVARQLASFGLTKEALLAAVRNVRGNQ--RVTSPHPEATYEALAKYGRDLVAEAKAGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DPVIGRD EIRR++RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L D
Sbjct: 177 IDPVIGRDSEIRRIIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLKDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+ ALDM ALVAGAK+RGEFEERLKAVL E+++++G++ILFIDE+H ++GAGR EG++DA
Sbjct: 237 IFALDMSALVAGAKFRGEFEERLKAVLNEIKKSDGRIILFIDELHTIVGAGRAEGAIDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPMLARG+LRCIGATTL+EYR+Y+EKD A ERRFQQV V EPSV DT+SILRGLKE+
Sbjct: 297 NMLKPMLARGELRCIGATTLDEYRQYIEKDPALERRFQQVLVQEPSVEDTISILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGV+I DRALV AA LS RYI+ R LPDKAIDLVDEACA +R +++S P E+D +
Sbjct: 357 YEVHHGVKIHDRALVAAAVLSDRYISDRFLPDKAIDLVDEACATIRTEMESMPSELDEVM 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ MQLEIE AL KE D+AS+ RL ++KEL DLR+K + +++KEKE +D +RRL+
Sbjct: 417 RRVMQLEIEEAALSKETDEASRERLAALQKELADLREKANAMKAQWQKEKEALDRVRRLR 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD--ENLMLTETVGPD 535
+ E L+EAE YDL +AA+LR+G I ++E + QLE S+ E +L E V +
Sbjct: 477 EALERAKRELEEAENEYDLNKAAELRHGRIPQLEKQLKQLEQEISEQSEGKLLREEVTEE 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKER-----------LIGLAEAVNAVAESVLRSRAGLGRP 584
+IAE+VSRWTGIP+TRL + E+E+ +IG EAV VA++VLR+RAG+ P
Sbjct: 537 EIAEIVSRWTGIPLTRLVEGEREKLLRLHELLHRRVIGQDEAVELVADAVLRARAGMKDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALAE LFD E L+R+DMSEYME+H+VSRLIGAPPGYV
Sbjct: 597 NRPIGSFLFLGPTGVGKTELAKALAEALFDSEEQLIRLDMSEYMEKHAVSRLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGRLTD QGRTVDF+NTV+
Sbjct: 657 GYEEGGQLTEAVRRKPYSVLLFDEIEKAHPEVFNILLQLLDDGRLTDSQGRTVDFKNTVV 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSN+G+ LL G + + R QV ++R HFRPE LNR+D+IV+F PLS +++
Sbjct: 717 IMTSNIGSPLLLENKHGDIDEET-RKQVFDQLRAHFRPEFLNRIDDIVLFKPLSMNEVKG 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ ++++ RLA+R + L +T+AA + +DP+YGARP++R+++K++ T L++ L
Sbjct: 776 IVEKFARELSARLADRHIELVLTEAAKQYIAEAGFDPVYGARPLKRFMQKQIETPLAKEL 835
Query: 825 VREEIDENSTVYID 838
+ + + STV +D
Sbjct: 836 IAGRVKDYSTVTVD 849
>gi|225156853|ref|ZP_03724956.1| ATP-dependent chaperone ClpB [Diplosphaera colitermitum TAV2]
gi|224802799|gb|EEG21049.1| ATP-dependent chaperone ClpB [Diplosphaera colitermitum TAV2]
Length = 870
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/868 (52%), Positives = 615/868 (70%), Gaps = 27/868 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P++FT + +AI A A + + HL ALL+ +GI + G A
Sbjct: 1 MDPNQFTQMSRQAITDAQSEARRRNNNEVETWHLLHALLAQENGIVPAIVEKLGLTTPA- 59
Query: 61 SAERVFNQAMKKLPSQTPAPD--EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ N+ + +LP + + D +I + + +V+ RA+ K D ++V+ L L L+
Sbjct: 60 -LQLAANRELDRLPRVSGSVDTSKIYVTQAVNEVLTRAEEEAKQLTDEFVSVEHLFLALV 118
Query: 119 EDSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
E ++ + + + V + +LRG ++V S + + T+ ALK YG DLVEQA
Sbjct: 119 EVAKPDALAKYLRSFNIDRRAVLKTLRELRG--AQRVTSDNPEATYNALKKYGIDLVEQA 176
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GK+DPVIGRD+EIRR +RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP L
Sbjct: 177 KKGKMDPVIGRDDEIRRTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPEGL 236
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + +LDMGALVAGAKYRGEFEERLKAVL EV++++G+++LFIDE+H ++GAG+TEG+
Sbjct: 237 KDKTIFSLDMGALVAGAKYRGEFEERLKAVLNEVKQSDGRILLFIDELHTIVGAGKTEGA 296
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATTL+EYRK++EKDAA ERRFQ V V PSV D +SILRG
Sbjct: 297 MDAGNLLKPMLARGELHCIGATTLDEYRKHIEKDAALERRFQPVQVEPPSVEDAISILRG 356
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
L+E++E HHGVRIQD ALV A LS RYI+ R LPDKAIDLVDEACA +R ++DS P+E+
Sbjct: 357 LRERFELHHGVRIQDNALVAAVTLSNRYISDRFLPDKAIDLVDEACAMIRTEMDSMPQEL 416
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L R+ +QLEIE AL+ EKD ASK RL +RKEL + R++ L ++++EK ID +
Sbjct: 417 DALTRRALQLEIEETALKLEKDDASKQRLETLRKELANTREQAGALKRQWEREKASIDRV 476
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTE 530
R+++++ + +++A+R YDL + A+L++G I ++EA + + E +D N + E
Sbjct: 477 RKIREELDAARVEMEKAQRAYDLNKLAELQHGRIPQLEAELKKSESVATDGGSNNQLFKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRA 579
V +++AE+V++W+GIPVTRL ++EK ER+IG EAV +E++LR+RA
Sbjct: 537 EVSAEEVAEIVAKWSGIPVTRLVESEKAKLLRLGDTLHERVIGQDEAVQLTSEAILRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSFLFLGPTGVGKTELAK LAE LFD E ++R+DMSEYME SV++LIGA
Sbjct: 597 GIKDPRRPVGSFLFLGPTGVGKTELAKTLAETLFDSEAAMIRLDMSEYMEPISVNKLIGA 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR+PY+V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRKPYAVILFDEIEKAHHDVFNALLQVLDDGRLTDGQGRTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NTVIIMTSN+G+ LL G+ G R+ V+ E+RK FRPE LNR+DE ++F PL+
Sbjct: 717 KNTVIIMTSNIGSRFLLDGVQGDAIPDGVRESVMAELRKSFRPEFLNRIDETILFKPLTL 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E++ K+ L + D+ RLA+R V + + A + + YDP++GARP++R+L++ + T+
Sbjct: 777 EEITKIVDLLLIDLNKRLADRRVTVNLDKKAREWTAEKGYDPVFGARPLKRFLQRNIETK 836
Query: 820 LSRMLVREEIDENSTVYIDASPKGDNLV 847
L+R L+ EI E S+V K D LV
Sbjct: 837 LARALISGEIAEGSSVTFQV--KDDELV 862
>gi|423564445|ref|ZP_17540721.1| chaperone ClpB [Bacillus cereus MSX-A1]
gi|401196578|gb|EJR03518.1| chaperone ClpB [Bacillus cereus MSX-A1]
Length = 875
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/876 (51%), Positives = 623/876 (71%), Gaps = 31/876 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPA---STTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ + L ++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYITGALQQLFVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKN 853
T+L+R L+ I +NS V +D + + LV V+ N
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVDVENN 868
>gi|108763122|ref|YP_633246.1| ATP-dependent chaperone protein ClpB [Myxococcus xanthus DK 1622]
gi|108467002|gb|ABF92187.1| ATP-dependent chaperone protein ClpB [Myxococcus xanthus DK 1622]
Length = 874
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/865 (52%), Positives = 605/865 (69%), Gaps = 31/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DK+T K EAI LA A + Q+ P HLA ALL GI + G +
Sbjct: 1 MRLDKYTVKAQEAIHEGQSLARRADNPQYEPEHLAAALLGQKDGIVDPLLRKIGADVKLF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+A +A++KLP + L+K +A+ K+ D ++ + L+L L D
Sbjct: 61 AAR--LGEALQKLPRMQGGESAM-LGQRLLKTFDKAEDEAKSLKDEFISSEHLLLALTHD 117
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+G++ K +GV RV S ++++RG GR V S + T+QAL+ YGRDL E A GK
Sbjct: 118 KGAVGEVMKSSGVTRERVLSGLKEVRGS-GR-VTSQDAEATYQALEKYGRDLTEAARSGK 175
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR V++LSRRTKNNPVLIGEPGVGKTA+ EGLA+RIV GDVP L + R
Sbjct: 176 LDPVIGRDEEIRRCVQVLSRRTKNNPVLIGEPGVGKTAIAEGLARRIVDGDVPEGLKNKR 235
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L++LD+GA+VAGAKYRGEFEERLKAVLKE+ +A G+VILFIDE+H ++GAG+ EG+MDA
Sbjct: 236 LVSLDLGAMVAGAKYRGEFEERLKAVLKEIADAAGEVILFIDELHTLVGAGKAEGAMDAG 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L CIGATTL+EYRK++EKDAA ERRFQ V V EPSV DT+SILRGLKE+
Sbjct: 296 NMLKPALARGELHCIGATTLDEYRKHIEKDAALERRFQPVLVGEPSVHDTISILRGLKER 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRIQD ALV AA LS RYI R LPDKAIDLVDEA + +R+++DS P E+D++
Sbjct: 356 YEVHHGVRIQDNALVAAATLSHRYIADRFLPDKAIDLVDEASSRLRIEIDSMPTELDDVR 415
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK QL+IE L KE D S+ RL ++ KEL +L +K L + + EK I IR LK
Sbjct: 416 RKMTQLQIEREGLRKETDPHSQERLGQIEKELANLSEKFNALKVHWDAEKTAIGAIRSLK 475
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAI----QEVEA---AIGQLEGNQSDENLMLTE 530
+K+E+ AER+ DL RAA+L++G I +E++A + +L+ NQ L E
Sbjct: 476 EKQEKAKNDQAAAERQGDLNRAAELKFGVIPSLDKELKAQNEKLAELQKNQK----FLKE 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V + IA+VV++WTGIPV+RL + E ++L IG A+ AV+ +V R+R+
Sbjct: 532 EVDAEDIAQVVAKWTGIPVSRLMEGEVQKLVHMEDRLANRVIGQRSAIEAVSNAVRRARS 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P GSF+FLGPTGVGKTE AKALAE LFDD++ +VRIDMSEYME+HSV+RL+GA
Sbjct: 592 GLQDPNRPIGSFIFLGPTGVGKTETAKALAEFLFDDDSAMVRIDMSEYMEKHSVARLVGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRRRPY+VVLFDE+EKAH VFN LLQ+LD+GRLTD QGRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAVRRRPYTVVLFDEIEKAHHDVFNVLLQILDEGRLTDSQGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTV+I+TSN+G++ + +GM GK + + R++V+ +R HFRPE LNR+DEIV+F+PL
Sbjct: 712 KNTVLILTSNIGSQDIQAGMAGKEELDERTRNEVMDALRAHFRPEFLNRVDEIVIFEPLR 771
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
+ + ++ LQ+ ++ LA++ + L +T+ A +++ YDP YGARP++R ++K ++
Sbjct: 772 KKDIYRIVDLQLARLSKLLADKRLTLELTEKARELLAERGYDPTYGARPLKRAVQKNLLD 831
Query: 819 ELSRMLVREEIDENSTVYIDASPKG 843
L+ ++ E + DA P G
Sbjct: 832 PLALKVLGGEFVPGDHIQADAGPDG 856
>gi|167636130|ref|ZP_02394435.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. A0442]
gi|170686647|ref|ZP_02877867.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. A0465]
gi|254682659|ref|ZP_05146520.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. CNEVA-9066]
gi|254740279|ref|ZP_05197971.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. Kruger B]
gi|421637779|ref|ZP_16078376.1| Chaperone protein clpB [Bacillus anthracis str. BF1]
gi|167528484|gb|EDR91249.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. A0442]
gi|170669170|gb|EDT19913.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. A0465]
gi|403395338|gb|EJY92577.1| Chaperone protein clpB [Bacillus anthracis str. BF1]
Length = 866
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/874 (52%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEERDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +T+AA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVKLTEAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|451336793|ref|ZP_21907347.1| ClpB protein [Amycolatopsis azurea DSM 43854]
gi|449420598|gb|EMD26069.1| ClpB protein [Amycolatopsis azurea DSM 43854]
Length = 876
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/863 (52%), Positives = 597/863 (69%), Gaps = 29/863 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ K T K+ EA+ A +A GH + HL ALL G+ + + AG +
Sbjct: 1 MDMSKLTRKSQEALQEAQSVAQRHGHTETDGEHLLFALLDQSDGLAPRLLEQAGAD--VD 58
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ + P T P ++ + L ++ A+ K D +++V+ L+L L
Sbjct: 59 GLRETVEAEIARRPKVTGPGATPGQVYLTRRLAGLLDTAEREAKRLKDEYVSVEHLVLAL 118
Query: 118 L---EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E S G L GV + + ++RG + +V SA+ + ++AL+ YGRDLV
Sbjct: 119 ADEGEKSAAGRLLTRYGVTRESFLTALTRIRGNQ--RVTSATPEGAYEALEKYGRDLVAD 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRRV++ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP
Sbjct: 177 ARSGKLDPVIGRDAEIRRVIQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + +LDMGALVAGAKYRGEFEERLKAVL EV+ EG+++LF+DE+H V+GAG TEG
Sbjct: 237 LRDKTIFSLDMGALVAGAKYRGEFEERLKAVLAEVKAEEGRILLFVDELHTVVGAGATEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L IGATTL+EYRK++EKDAA ERRFQ + V EPSV DT+SILR
Sbjct: 297 AMDAGNMLKPMLARGELHMIGATTLDEYRKHIEKDAALERRFQPIVVDEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E+ E HGV+IQD ALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 357 GLRERLEVFHGVKIQDGALVAAATLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D L R+ +LEIE AL KE D+ASKARL ++ KEL DLR + +++ E++ I
Sbjct: 417 LDELTRRVTRLEIEQAALSKESDQASKARLADLEKELADLRAEADSKKAQWEAERQGIRR 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLML 528
++ L+ + E L +EAER YDL RAA+LRYG I E E + QL G Q + L L
Sbjct: 477 VQELRSELERLRHEAEEAERNYDLNRAAELRYGEITEAERRLAAEEEQLAGKQGRKRL-L 535
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRS 577
E V ++IAE+V+ WTGIPV+RL + E+ ER+IG EAV VA++++R+
Sbjct: 536 HEVVTEEEIAEIVAAWTGIPVSRLQEGEREKLLRLDEILHERVIGQDEAVRLVADAIIRA 595
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E +VR+DMSEY E+H+VSRL+
Sbjct: 596 RSGIRDPRKPIGSFIFLGPTGVGKTELAKTLASALFDSEENMVRLDMSEYQERHTVSRLL 655
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQVLDDGR+TD QGRTV
Sbjct: 656 GAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNTLLQVLDDGRITDAQGRTV 715
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
DFRNTVIIMTSN+G++HLL G+ ++ ARD VL E+R FRPE LNR+D+IV+F P
Sbjct: 716 DFRNTVIIMTSNIGSQHLLDGVTSTGEIKPDARDAVLAELRHQFRPEFLNRVDDIVLFTP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L ++ ++ LQ ++ RLAE +++ +T A ++ +DP+YGARP+RR++ +V
Sbjct: 776 LGRSEIERIVDLQFDELRHRLAELDISVELTAEARKLIAQHGFDPVYGARPLRRYISHEV 835
Query: 817 VTELSRMLVREEIDENSTVYIDA 839
T + R L+R E E + +DA
Sbjct: 836 ETRIGRTLLRGEPTEGLVITVDA 858
>gi|54035749|sp|O87444.2|CLPB_PLEBO RecName: Full=Chaperone protein ClpB
Length = 873
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/859 (51%), Positives = 608/859 (70%), Gaps = 32/859 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
N +KFT K EAI E+ A Q HL ALL + G+ N A
Sbjct: 5 NSEKFTEKVWEAIYRTQEMYKQAQQQQIETEHLMKALL-EQDGLAISIFNKL-----AVP 58
Query: 62 AERVFNQA---MKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+RV ++ +++ P + + + ++ RA+ +K D+ ++++ L+LG
Sbjct: 59 VDRVRDRTDDFIRRQPKVSGSGTSVYWGRRADALLXRAEEYRKQFEDSFISIEHLLLGYA 118
Query: 119 EDSQIGD-LFKEAGVA-VARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+DS+ G L E A++++ +E++RG + KV + + +++L+ YGRDL + A
Sbjct: 119 QDSRFGKALLSEFRYPDEAKLRNAIEQVRGNQ--KVTDQTPENKYESLEKYGRDLTQYAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L
Sbjct: 177 EGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRILSGDVPQSLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +LIALDMGAL+AGAKYRGEFEERLKAVLKEV ++ G +ILFIDEIH V+GAG T+G+M
Sbjct: 237 DRKLIALDMGALIAGAKYRGEFEERLKAVLKEVTDSRGNIILFIDEIHTVVGAGATQGAM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQV+V +PSV DT+SILRGL
Sbjct: 297 DAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVFVDQPSVEDTISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGV+I D ALV AA LS RYI+ R LP KAIDLVDEA A +++++ S+PEE+D
Sbjct: 357 KERYEVHHGVKISDSALVAAATLSTRYISDRFLPSKAIDLVDEAAAKLKMEITSKPEELD 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
++RK +QLE+E +L+KE D S+ RL + +EL D ++ L +++ EK I +++
Sbjct: 417 EVDRKVLQLEMERLSLQKENDAGSRDRLERLERELADFKEDQSKLNAQWQAEKSVITDLQ 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTE 530
+LK++ + + +Q+AER YDL RAA+L+YG + E VE QL Q +L E
Sbjct: 477 KLKEEIDRVNLEIQQAERDYDLNRAAELKYGKLNELNRKVEETESQLSQIQKSGATLLRE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRA 579
V IAE++S+WTGIPV++L ++E +R+IG EAV AV++++ RSRA
Sbjct: 537 EVLESDIAEIISKWTGIPVSKLVESEMQKLLQLDDVLHQRVIGQDEAVTAVSDAIQRSRA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +PT SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+HSVSRLIGA
Sbjct: 597 GLSDPNRPTASFIFLGPTGVGKTELAKALAAFLFDTEEAMVRIDMSEYMEKHSVSRLIGA 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSQGRTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSN+G++++ + +V++ + +FRPE LNR+DEI++F L
Sbjct: 717 KNTIIIMTSNIGSQYIFEYGGDDDRYEEILSRVMEAMLSNFRPEFLNRIDEIIIFHSLQK 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
QLR++ ++Q + RLA R ++L ++DAALD LAE +DP+YGARP++R +++++ T
Sbjct: 777 AQLREIVKIQTHRLESRLA-RKMSLKLSDAALDF-LAEGFDPVYGARPLKRAIQRELETT 834
Query: 820 LSRMLVREEIDENSTVYID 838
+++ ++R E T+++D
Sbjct: 835 IAKEILRSNFTEGDTIFVD 853
>gi|229177685|ref|ZP_04305062.1| Chaperone protein clpB 1 [Bacillus cereus 172560W]
gi|228605875|gb|EEK63319.1| Chaperone protein clpB 1 [Bacillus cereus 172560W]
Length = 866
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/874 (51%), Positives = 625/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL ++ EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQHELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|256828102|ref|YP_003156830.1| ATP-dependent chaperone ClpB [Desulfomicrobium baculatum DSM 4028]
gi|256577278|gb|ACU88414.1| ATP-dependent chaperone ClpB [Desulfomicrobium baculatum DSM 4028]
Length = 864
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/858 (52%), Positives = 606/858 (70%), Gaps = 24/858 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT K+ EA+A A +A GH Q HL AL+ G+ + + +G + A
Sbjct: 1 MDLSKFTKKSQEAVAEAQAVAIRLGHQQVDVDHLFRALVGQEQGLVPRLLERSGCDVRAL 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
++ + + K+P + P +I + + +V+ AQ K D +++V+ ++L +
Sbjct: 61 AS--ALDSELGKMPRVSGPGAQPGQIYVTQRMNEVMLAAQDLAKKMQDEYVSVEHVLLAI 118
Query: 118 LEDSQIGD---LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
L+ G + ++ G+ ++ S + ++RG + +V S + + T+ AL YGRDLVE
Sbjct: 119 LDKPGTGPSAVVLRQFGLTKDKILSVLAEVRGNQ--RVTSDNPEETYDALNKYGRDLVED 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRR +RILSRRTKNNPV+IGE GVGKTA+VEGLAQRI+ DVP
Sbjct: 177 ARKGKLDPVIGRDSEIRRCIRILSRRTKNNPVMIGEAGVGKTAIVEGLAQRILNKDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMGAL+AGAKYRGEFEERLKAVLKEV+++EG+VILFIDE+H ++GAG+TEG
Sbjct: 237 LKDKTVFALDMGALIAGAKYRGEFEERLKAVLKEVQKSEGRVILFIDELHTIVGAGKTEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EPSV D +SILR
Sbjct: 297 AMDAGNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVEEPSVEDAISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHGVRI D ALV A LS+RYI+ R LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLKERFEVHHGVRISDSALVTAVTLSSRYISDRQLPDKAIDLIDEAAAMIRTEIDSLPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK MQLEIE AL +E D AS+ RL ++ KEL +L++ L ++++EK IDE
Sbjct: 417 LDEINRKAMQLEIEREALRRESDAASRERLEKLEKELAELKETQTGLRAQWEREKSGIDE 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETV 532
I +LK++ E A+ +AER YDL +AA+L+Y + E+E + L E +L E V
Sbjct: 477 ISQLKKELEATKEAIAKAEREYDLNKAAELKYSRLIELERKLETLSSGDDGEQRLLREEV 536
Query: 533 GPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGL 581
GPD IA ++S+WTGIPV +L G+ EK ER+IG EAV AVA++VLR+RAGL
Sbjct: 537 GPDDIASIISKWTGIPVVKLVEGEREKLLKLGDILHERVIGQDEAVQAVADAVLRARAGL 596
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
PQ+P GSF+FLGPTGVGKTEL K LA+ LFD +VR+DMSEYME+H+V+RLIGAPP
Sbjct: 597 KNPQRPIGSFMFLGPTGVGKTELCKTLAKSLFDTVENMVRLDMSEYMEKHTVARLIGAPP 656
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GY+G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQ+LDDGRLTD GRTVDF+N
Sbjct: 657 GYIGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQILDDGRLTDSHGRTVDFKN 716
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVA-RDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
T+IIMTSN+G+ LL G+ + ++ R+ V+ +R HFRPE LNR+DEIV+F PL E
Sbjct: 717 TIIIMTSNIGSHLLLEGITEQGELRDGVREAVMGVLRGHFRPEFLNRVDEIVLFKPLLIE 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q+ ++ L + ++ RL ER + L +TD A + + E+YDP+YGARP+ R+L+ + T L
Sbjct: 777 QITRIIDLLLANLQARLDERKITLVLTDRAKEFIAREAYDPVYGARPLLRYLQHHLETPL 836
Query: 821 SRMLVREEIDENSTVYID 838
+R ++ + + + +D
Sbjct: 837 AREIIAGRLHDGQELVVD 854
>gi|300780363|ref|ZP_07090219.1| chaperone protein ClpB [Corynebacterium genitalium ATCC 33030]
gi|300534473|gb|EFK55532.1| chaperone protein ClpB [Corynebacterium genitalium ATCC 33030]
Length = 884
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/863 (53%), Positives = 599/863 (69%), Gaps = 39/863 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG--GENA 58
NP T KT EA+ A + A++ G+ P HL A+LS GI A + G +
Sbjct: 4 FNP---TTKTQEALQQALQTASANGNPDIRPAHLLQAILSQEEGIAAPVLKATGVDPQTV 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ A + + K P+ + + + AQ GD +++ + L+ G+
Sbjct: 61 VKEAAAIVDGYPKAEGQNMANPN---FNRDGLNALNTAQELASELGDEYVSTEVLLAGIA 117
Query: 119 EDSQ-IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
S DL K+ G +K +RG + KV + + FQAL+ Y DL +A
Sbjct: 118 RGSDDAADLLKKRGATYETIKGAFPSVRGHQ--KVTTQDPEGQFQALEKYSTDLTARARE 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GK+DPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLA+RIV GDVP +L
Sbjct: 176 GKIDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKG 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSM 294
LI+LD+G++VAGAK+RGEFEERLKAVL E++ ++G++I FIDE+H ++GAG T EGSM
Sbjct: 236 KTLISLDLGSMVAGAKFRGEFEERLKAVLDEIKSSDGEIITFIDELHTIVGAGATGEGSM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQVYV EPSV DT+ ILRGL
Sbjct: 296 DAGNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVYVGEPSVEDTIGILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
K++YE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS P+EID
Sbjct: 356 KDRYEVHHGVRIQDSALVAAASLSDRYITNRFLPDKAIDLVDEAGSRLRMEIDSSPQEID 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
LER +LEIE ALEKE D AS+ RL +R+EL D R+KL + R++ EK ID+++
Sbjct: 416 ELERVVRRLEIEEIALEKESDAASRERLDALRQELADQREKLGEMKARWENEKSEIDKVQ 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
K++ E+L + AER D A+ ++LRYG I E+EA + E + S E ML E V P
Sbjct: 476 HAKEELEDLRNQSEIAERDGDFAKVSELRYGRIPELEAQVEAAEASAS-EKTMLAEEVTP 534
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
D IA+VVS WTGIP ++ + E E R++G EAVNAV+++V RSRAG+
Sbjct: 535 DVIADVVSSWTGIPAGKMMEGETEKLLHMESVLGGRVVGQHEAVNAVSDAVRRSRAGIAD 594
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAK+LAE LFDDE+ ++RIDMSEY E+HSV+RL+GAPPGY
Sbjct: 595 PNRPIGSFLFLGPTGVGKTELAKSLAEFLFDDESAMIRIDMSEYGEKHSVARLVGAPPGY 654
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG + GGQLTEAVRRRPYS+VLFDEVEKAH VF+ LLQVLD+GRLTDGQGRTVDFRNTV
Sbjct: 655 VGFDAGGQLTEAVRRRPYSLVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTV 714
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
II+TSNLGA L RD++++ V++ F+PE +NRLD++VVFDPL+ +QL
Sbjct: 715 IILTSNLGAGGL-------------RDEIMEAVKRAFKPEFINRLDDVVVFDPLTQDQLV 761
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ +A RLAER +AL VTDAA + YDP YGARP+RR ++K++ +L+R
Sbjct: 762 GIVDIQLRGLADRLAERRLALDVTDAAKRWLADRGYDPAYGARPLRRLIQKEIGDKLARE 821
Query: 824 LVREEIDENSTVYIDASPKGDNL 846
++ EI + V ++ P D L
Sbjct: 822 VLAGEIRDGDAVLVEVGPDADTL 844
>gi|222094897|ref|YP_002528957.1| ATP-dependent clp protease, ATP-binding subunit clpb [Bacillus
cereus Q1]
gi|221238955|gb|ACM11665.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus Q1]
Length = 866
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/874 (52%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++++ ++L
Sbjct: 61 KQGAENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISIEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLGEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEVGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|423643675|ref|ZP_17619293.1| chaperone ClpB [Bacillus cereus VD166]
gi|401272887|gb|EJR78876.1| chaperone ClpB [Bacillus cereus VD166]
Length = 866
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/874 (52%), Positives = 624/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFFFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRVLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|262039647|ref|ZP_06012938.1| ATP-dependent chaperone protein ClpB [Leptotrichia goodfellowii
F0264]
gi|261746333|gb|EEY33881.1| ATP-dependent chaperone protein ClpB [Leptotrichia goodfellowii
F0264]
Length = 856
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/866 (49%), Positives = 614/866 (70%), Gaps = 30/866 (3%)
Query: 4 DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAE 63
+KFT K+ EA++ AH A + HL +AL+ +G+ + G N + +
Sbjct: 3 EKFTQKSMEALSEAHNFAVRYKSSDMKVEHLLLALIGQMNGLIPNILKKMGI-NTIELTK 61
Query: 64 RVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQI 123
++ ++ + ++P + + L +VI A+ K GD +++ + L L +++
Sbjct: 62 KLEDK-LNRMPKIEGGTSDPRPNGELNRVIVGAEDYAKKMGDAYISTEHLFLASYDNNS- 119
Query: 124 GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPV 181
+E G+ + ++ + ++RG GRK+ S + + +++AL+ YG+DLVE A GKLDP+
Sbjct: 120 --FLRENGIVKNQFENVLNEIRG--GRKIMSDNPENSYEALEKYGKDLVELARKGKLDPI 175
Query: 182 IGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIAL 241
IGRD+EIRR ++ILSRR KNNP+LIGEPGVGKTA+ EG+AQRI++GDVP NL D + +L
Sbjct: 176 IGRDQEIRRAIQILSRRNKNNPILIGEPGVGKTAIAEGIAQRILKGDVPENLKDKTIFSL 235
Query: 242 DMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFK 301
DMGAL++GAKYRGEFEERLKAVL E+E ++G++ILFIDE+H ++GAG+TEGSMDA NL K
Sbjct: 236 DMGALISGAKYRGEFEERLKAVLDELENSDGRIILFIDEVHNIVGAGKTEGSMDAGNLLK 295
Query: 302 PMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGH 361
PMLARG+++ IGATTL+EYRKY+EKDAA ERRFQ + V EP+V DT+SILRGLKEK+E
Sbjct: 296 PMLARGEIKVIGATTLDEYRKYIEKDAALERRFQPIMVNEPTVEDTISILRGLKEKFEIF 355
Query: 362 HGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRM 421
HG+RI D A+V AA +S RYI R LPDKAIDL+DEA A V+ +++S P E+D + R+ M
Sbjct: 356 HGIRITDNAIVTAATMSDRYINDRFLPDKAIDLIDEAAAKVKTEINSMPTELDEVTRRLM 415
Query: 422 QLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKRE 481
QLEIE AL KEKD+ASK RL + KE+ +L+++ L +++ EK+ + ++ ++ E
Sbjct: 416 QLEIEKVALTKEKDQASKDRLESLEKEIAELKEEETKLKSQWENEKQEAGRLTKINEEIE 475
Query: 482 ELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN-----LMLTETVGPDQ 536
++ +QEAER+ D + A+L+YG + +E E D N +L + + ++
Sbjct: 476 KVNLEIQEAERKSDYNKLAELKYGKLATLEKERENEEEKWKDRNEGNGSKLLKQEIDSEE 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQ 585
IAE+V +WTGIPV++L Q EKE+++ LA EA+ ++++++RSRAGL P
Sbjct: 536 IAEIVGKWTGIPVSKLLQGEKEKILNLAEHMKARVIGQDEAIETISDTIIRSRAGLKDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKT L K LA LFDDEN +VRIDMSEYM++ SV+RLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTYLTKTLAHNLFDDENNIVRIDMSEYMDKFSVTRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGRLTDG+G+ VDF+NT++I
Sbjct: 656 YEEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNVLLQLLDDGRLTDGKGKVVDFKNTIVI 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSN+G+E +L K++ V ++ VL E++ F+PE LNR+D+I+VF L E ++ +
Sbjct: 716 MTSNIGSEIILED--PKLS-NVTKEAVLDEMKHRFKPEFLNRIDDIIVFKSLGKEHVKNI 772
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
L +KD+ +L ++ + + TD ALD ++ E+YDP YGARP++R+++K + T LS+M++
Sbjct: 773 ISLILKDINKKLKDQFIKIEFTDKALDYIVDEAYDPAYGARPLKRFVQKDIETNLSKMIL 832
Query: 826 REEIDENSTVYIDASPKGDNLVYRVQ 851
EI ENSTV ID+ G+ L Y+V+
Sbjct: 833 SNEIPENSTVLIDSD--GEKLTYKVK 856
>gi|83859253|ref|ZP_00952774.1| endopeptidase Clp: ATP-binding subunit B, clpB [Oceanicaulis sp.
HTCC2633]
gi|83852700|gb|EAP90553.1| endopeptidase Clp: ATP-binding subunit B, clpB [Oceanicaulis
alexandrii HTCC2633]
Length = 874
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/858 (52%), Positives = 603/858 (70%), Gaps = 32/858 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
M+ +KFT + + A LA + F+P HL ALL D + I AGG + A
Sbjct: 1 MDFEKFTDRARTVLQGAQGLALKNKNQHFSPEHLLKALLDDDQKLTVNLIKAAGGRPDVA 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL- 117
A ER A+ LP A ++ + +V A+ A K GD ++ ++++ GL
Sbjct: 61 ADLTER----ALTALPKVESATGQLYLAPKTAEVFTTAEEAAKKAGDEYITAERILQGLT 116
Query: 118 -LEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
++ + ++ K+AGV + + V LR +GR +S S + +++ALK Y RDL E A
Sbjct: 117 LVKGQKAEEILKQAGVTPQALNTAVNDLR--QGRTADSQSAEDSYEALKKYARDLTEVAR 174
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRR V++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L
Sbjct: 175 EGKLDPVIGRDEEIRRAVQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLK 234
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
RL+ALDMG+L+AGAKYRGEFEERLK+VL EVE A G +ILFIDE+H ++GAG+T+G+M
Sbjct: 235 GKRLLALDMGSLIAGAKYRGEFEERLKSVLNEVEAAGGNIILFIDEMHTLVGAGKTDGAM 294
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V EP+V DT+SILRGL
Sbjct: 295 DASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVEEPTVEDTISILRGL 354
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KEKYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +R+Q+DS+PEE+D
Sbjct: 355 KEKYEVHHGVRIADGAIVAAATLSNRYITDRFLPDKAIDLMDEASARLRMQVDSKPEELD 414
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L+R+ +QL+IE AL+KE D+ASK RL + KEL +L + L ++ EK+++
Sbjct: 415 ELDRRIIQLKIEAEALKKEGDEASKKRLETLNKELSELEGRSAELTAAWRAEKDKLASST 474
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI----GQLEGNQSDENLMLTE 530
LK++ + L L +AERR DL +A++L+YG I ++E + +G +D + ++ E
Sbjct: 475 ELKERLDRLRAELADAERRGDLGKASELKYGQIPQIEKQLKEAEDAADGAANDSSALVKE 534
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V +QIA VVSRWTG+PV ++ + E+E+L +G EA+ AV+++V RSRA
Sbjct: 535 VVDEEQIAAVVSRWTGVPVDKMLEGEREKLLAMEEGLRKRVVGQEEALEAVSDAVRRSRA 594
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P GSFLFLGPTGVGKTEL KALAE LFDDE + R+DMSEYME+HSV+RLIGA
Sbjct: 595 GLKDPSRPIGSFLFLGPTGVGKTELTKALAEFLFDDETAVTRMDMSEYMEKHSVARLIGA 654
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGG LTE+VRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDF
Sbjct: 655 PPGYVGYEEGGALTESVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDF 714
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
RNT++IMTSNLG+E LL+G ++ ARDQV+ VR FRPE LNR+DEI++F L
Sbjct: 715 RNTILIMTSNLGSEFLLAG-----DVEAARDQVMDVVRSSFRPEFLNRIDEIILFRRLEE 769
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
+ + + +Q+K + LA+R + L + ++A + + YDP YGARP++R ++K++
Sbjct: 770 QHMGAIVDIQLKRLEKLLADRRMTLELDESARQWLATKGYDPAYGARPLKRVIQKELQDP 829
Query: 820 LSRMLVREEIDENSTVYI 837
L+R+++ + + T+ +
Sbjct: 830 LARLILEGSLQDGETLKV 847
>gi|442322518|ref|YP_007362539.1| ATP-dependent chaperone protein ClpB [Myxococcus stipitatus DSM
14675]
gi|441490160|gb|AGC46855.1| ATP-dependent chaperone protein ClpB [Myxococcus stipitatus DSM
14675]
Length = 874
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/865 (52%), Positives = 599/865 (69%), Gaps = 31/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DKFT K EAI LA A + Q+ P HLA ALL GI + G +
Sbjct: 1 MRLDKFTVKAQEAIQEGQTLARRADNPQYEPEHLAAALLGQKDGIVDPLLRKLGADVKLF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
++ +A+ KLP + L+K +A KA D ++ + L+L L +D
Sbjct: 61 ASR--LGEALGKLPRMQGGESAM-LGQRLLKTFDKADDEAKALKDEFISSEHLLLALTQD 117
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+G++ K +GV RV S ++++RG GR V S ++T+QAL+ YGRDL E A GK
Sbjct: 118 KGALGEVMKASGVTRERVLSSLKEVRGS-GR-VTSQDAESTYQALEKYGRDLTEAAREGK 175
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA+RIV GDVP +L + +
Sbjct: 176 LDPVIGRDEEIRRCIQVLSRRTKNNPVLIGEPGVGKTAIAEGLARRIVDGDVPESLKNKQ 235
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
LI LD+GA+VAGAKYRGEFEERLKAVLKEV ++ G+VILFIDEIH ++GAG+ EG+MDA
Sbjct: 236 LITLDLGAMVAGAKYRGEFEERLKAVLKEVADSAGQVILFIDEIHTIVGAGKAEGAMDAG 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L CIGATTL+EYRK++EKDAA ERRFQ V+V EPSV DT+SILRGLKE+
Sbjct: 296 NMLKPALARGELHCIGATTLDEYRKHIEKDAALERRFQPVFVGEPSVHDTISILRGLKER 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRIQD ALV AA LS RYI R LPDKAIDLVDEA + +R+++DS P E+D++
Sbjct: 356 YEVHHGVRIQDTALVAAATLSHRYIADRFLPDKAIDLVDEAASRLRIEIDSMPTELDDMR 415
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK QL+IE L KE D S+ RL ++ KEL ++R++ L + EK I IR LK
Sbjct: 416 RKMTQLQIEKEGLRKETDPHSQERLAQIEKELANMRERFDALKAHWDAEKSAIGAIRGLK 475
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVE-------AAIGQLEGNQSDENLMLTE 530
+K E++ AER+ DL RAA+L++G + +E + + +L+ NQ L E
Sbjct: 476 EKLEKVKNDQVAAERQGDLNRAAELKFGVMPSLEKDLQTQNSKLEELQKNQK----FLKE 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRA 579
V + IA VV++WTGIPV+RL + E +R+IG A+ AV+ +V R+R+
Sbjct: 532 EVDSEDIAAVVAKWTGIPVSRLMEGEVQKLVHMEDRLGQRVIGQRSAIEAVSNAVRRARS 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P GSF+FLGPTGVGKTE AKALAE LFDD+ +VRIDMSEYME+H+VSRL+GA
Sbjct: 592 GLQDPNRPIGSFIFLGPTGVGKTETAKALAEFLFDDDTAMVRIDMSEYMEKHAVSRLVGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRRRPY+VVLFDE+EKAH VFN LLQ+LD+GRLTD QGRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNILLQILDEGRLTDSQGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+N V+IMTSN+G+ + +GM GK + + R+ + +R HFRPE LNR+DEIV+F+PL
Sbjct: 712 KNAVLIMTSNIGSADIQAGMAGKDELDEKTRNDAMDALRAHFRPEFLNRVDEIVIFEPLR 771
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
+ + ++ LQ+ ++ LAE+ + L +T+ A +++ YDP YGARP++R +++ ++
Sbjct: 772 KKDIYRIVDLQLAKLSQLLAEKRLTLELTEPARELLAERGYDPTYGARPLKRAVQRNLLD 831
Query: 819 ELSRMLVREEIDENSTVYIDASPKG 843
L+ ++ + T+ DA P G
Sbjct: 832 PLALKVLNGDFVPGDTIQADAGPSG 856
>gi|415716971|ref|ZP_11466658.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 1500E]
gi|388061471|gb|EIK84127.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 1500E]
Length = 864
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/867 (52%), Positives = 613/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + A +AG+AQ LHLA ALL G+ I AG + AQ
Sbjct: 4 KFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGAD--AQQIGS 61
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
A+ LPS T + P AS L+ + +A+ +A GD +++ + +++G++ E +
Sbjct: 62 EIRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMRAMGDEYVSTEHMLIGMVASEPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 122 SVADIFKKHNVSADVLRKVVPTVRG--GAKVTSPDAEGNYKALEKYSVDMTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVLKE+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 240 SLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EYR+++EKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 300 LKPMLARGELRLVGATTLNEYREHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A++ RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDAAARERLEKLQEELANSREKLTGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E S+ E + PDQ
Sbjct: 480 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESEASNAKSEAKEPMVPDQVDA 539
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 540 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 600 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 660 IGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PLS E+L
Sbjct: 720 LIMTSNLGSQFLVQEGLDDAA---KRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELG 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ VA RL++R ++L V+D+A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 777 GIVDIQVRQVAARLSDRRISLDVSDSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 836
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + V D + D++ ++
Sbjct: 837 LLSGKVHDGAHVVADCAESDDHVTLKI 863
>gi|302774152|ref|XP_002970493.1| hypothetical protein SELMODRAFT_411118 [Selaginella moellendorffii]
gi|300162009|gb|EFJ28623.1| hypothetical protein SELMODRAFT_411118 [Selaginella moellendorffii]
Length = 1060
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/863 (50%), Positives = 604/863 (69%), Gaps = 30/863 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
++ FT+ +A+ A E+A ++ HL ALL +G+ + AG +N+A
Sbjct: 183 LSAKDFTNMAWQAVVSAVEVAQTSRQQVVETEHLLKALLEQKNGLARRIFTKAGIDNSAL 242
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q+ ER +++ P T +L ++ RA+ GDT+ +++ L+L L
Sbjct: 243 LQATERY----IERQPKVTGNISGAMVGQSLETLLDRAKVHMDDFGDTYTSIEHLVLALA 298
Query: 119 EDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
ED +IG +LF + G+ K + +RG + KV + + ++AL+ +G DL E A
Sbjct: 299 EDIRIGKELFGQFGLNAKATKDAINAIRGSQ--KVTDQAPENKYEALEKFGVDLTEMARQ 356
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRR ++IL RRTKNNPV+IGEPGVGKTA+ EGLAQRIV+GDVP LA+
Sbjct: 357 GKLDPVIGRDDEIRRCIQILCRRTKNNPVVIGEPGVGKTAIAEGLAQRIVQGDVPEALAN 416
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LI+LD+GAL+AGAK++GEFE+RLKAVLKEV+E+EG ++LFIDEIH+V+GAG T G+MD
Sbjct: 417 RKLISLDLGALIAGAKFQGEFEDRLKAVLKEVKESEGYIVLFIDEIHMVVGAGATSGAMD 476
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPML RG+LRCIGATT++EYRKY+EKDAA ERRFQQVYV EP+V DT+SILRGL+
Sbjct: 477 AGNLLKPMLGRGELRCIGATTIKEYRKYLEKDAALERRFQQVYVPEPAVEDTISILRGLR 536
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGV+I D ALV AA LS+RYI+ R LPDKAIDLVDEA A ++++ S+P +D
Sbjct: 537 EKYELHHGVKISDNALVEAALLSSRYISDRFLPDKAIDLVDEAAAKLKMERTSKPTALDE 596
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R ++LE+E +LE + DKAS+ RL ++ EL L++K + L +++ EK + I
Sbjct: 597 IDRAIIKLEMERLSLEHDNDKASRERLQKLEAELASLKEKQKALQQQWEMEKSIMTRINS 656
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTET 531
K++ + + +Q+AER YDL RAA+L+YG + ++ + + EG + E ML E
Sbjct: 657 CKEEIDRVNLEIQQAERDYDLNRAAELKYGVLINLQKQLKETEGELATYRKSEKTMLREE 716
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
+ D IAE+VS+WT IPV+RL Q+E E RLIG AV AVA+++ RSRAG
Sbjct: 717 ITADDIAEIVSKWTKIPVSRLLQSEMEKLLQLDDHLHKRLIGQDPAVKAVADAIRRSRAG 776
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P SF+F+GPTGVGKTELAKALAE LFD + L+R DMSEYME+H+VSRLIGAP
Sbjct: 777 LSDPNRPIASFMFMGPTGVGKTELAKALAEYLFDTDKALLRFDMSEYMEKHAVSRLIGAP 836
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTE+VRRRPYSVVLFDE+EKAH VFN LQ+LDDGR+TD QGRTV+F
Sbjct: 837 PGYVGYEEGGQLTESVRRRPYSVVLFDEIEKAHGDVFNIFLQILDDGRVTDSQGRTVNFT 896
Query: 701 NTVIIMTSNLGAEHLLSGMMG----KVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
NTV+IMTSNLG++H+L + K Q ++ V++ R FRPE +NR+DE +VF P
Sbjct: 897 NTVVIMTSNLGSQHILDALKSSGNKKAAYQAMKETVMEVARSTFRPEFMNRVDEFIVFQP 956
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L +Q++ + +LQ+++V RL R ++L +TD A+ + YDP YGARP++R +++ V
Sbjct: 957 LDVDQIQNIVKLQLQNVEKRLQHRKISLKITDDAVQVFAKLGYDPNYGARPVKRVIQQYV 1016
Query: 817 VTELSRMLVREEIDENSTVYIDA 839
EL++ ++R + E TV I +
Sbjct: 1017 TNELAKGILRGDFKEEDTVLITS 1039
>gi|219683162|ref|YP_002469545.1| ATP-dependent chaperone ClpB [Bifidobacterium animalis subsp.
lactis AD011]
gi|384190129|ref|YP_005575877.1| chaperone ClpB [Bifidobacterium animalis subsp. lactis BB-12]
gi|384192920|ref|YP_005578667.1| chaperone ClpB [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|61679305|gb|AAX52932.1| ClpB [Bifidobacterium animalis subsp. animalis ATCC 25527]
gi|219620812|gb|ACL28969.1| ATP-dependent chaperone ClpB [Bifidobacterium animalis subsp.
lactis AD011]
gi|289177621|gb|ADC84867.1| ClpB [Bifidobacterium animalis subsp. lactis BB-12]
gi|340365657|gb|AEK30948.1| ClpB [Bifidobacterium animalis subsp. lactis CNCM I-2494]
Length = 899
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/857 (53%), Positives = 605/857 (70%), Gaps = 30/857 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
K+T EA+ A + A++AG+ Q PLHL +LL +G+ I G A+
Sbjct: 8 KYTTLAQEALGDAVQSASAAGNPQVEPLHLLDSLLRQENGVIGGLIEAVGANRQTIGAQ- 66
Query: 65 VFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE--DS 121
A+ LPS + + + AS L + A K GD +++ + L+LG+L+ +
Sbjct: 67 -VRNALVSLPSASGSSTAQASASRQLTTALADASKEMKDMGDEYISTEHLLLGILDAAPN 125
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ + ++ G+ +V++ + +RG G KV S + +++AL+ + DL +A GKLD
Sbjct: 126 EAAKILEQNGITADKVRAAIPNVRG--GAKVTSPDAEASYKALEKFSTDLTARAREGKLD 183
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLA+RIV GDVPS L + RLI
Sbjct: 184 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAERIVAGDVPSTLQNKRLI 243
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK VL E+++++G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 244 SLDLGSMVAGSKYRGEFEERLKGVLDEIKQSDGQIITFIDEIHTIVGAGAAEGSMDAGNM 303
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 304 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 363
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 364 AHHKVTIGDDALVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 423
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ EKE +++ L+ +
Sbjct: 424 VTRLEMEEMQLKKAEDPASKERLAKLQSELADAREKLAGLNARWNAEKEGHNKVGDLRAQ 483
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS-------DENLMLTETV 532
+E +A R DLA+A+ + YG I ++ + + E ++ M+ + V
Sbjct: 484 LDEKRVEADKATREGDLAKASRILYGEIPAIQKQLTEAEHEAEKEADFAHEDEPMVPDHV 543
Query: 533 GPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGL 581
D +A +VS WTGIPV RL G+NEK R+IG EAV AV+++V RSRAGL
Sbjct: 544 DADSVAGIVSEWTGIPVGRLMQGENEKLLNMEEYLNRRVIGQPEAVRAVSDAVRRSRAGL 603
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +PTGSFLF+GPTGVGKTELAKALAE LFDDE ++RIDMSEYME+ SVSRLIGA P
Sbjct: 604 SDPNRPTGSFLFMGPTGVGKTELAKALAEFLFDDEKAMIRIDMSEYMEKSSVSRLIGAAP 663
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRRRPYSVVLFDEVEKA+ VF+ LLQVLDDGRLTDGQGRTVDF+N
Sbjct: 664 GYVGYEEGGQLTEAVRRRPYSVVLFDEVEKANSEVFDILLQVLDDGRLTDGQGRTVDFKN 723
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T++IMTSNLG++ L++ + + Q +D V+ V FRPE LNRLD++V+F PL+ ++
Sbjct: 724 TILIMTSNLGSQFLVNPDLDE---QQKKDAVMNAVHSQFRPEFLNRLDDMVIFHPLTRQE 780
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L K+ LQ+K VA RL +R + L VT+AA + + YDP YGARP+RR ++ +V +L+
Sbjct: 781 LGKIVDLQVKQVASRLTDRRITLDVTEAAREWLADTGYDPAYGARPLRRLVQTEVGDQLA 840
Query: 822 RMLVREEIDENSTVYID 838
RML+ EI + TV +D
Sbjct: 841 RMLLAGEIKDGDTVLVD 857
>gi|209543912|ref|YP_002276141.1| ATP-dependent chaperone ClpB [Gluconacetobacter diazotrophicus PAl
5]
gi|209531589|gb|ACI51526.1| ATP-dependent chaperone ClpB [Gluconacetobacter diazotrophicus PAl
5]
Length = 867
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/861 (52%), Positives = 604/861 (70%), Gaps = 23/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT ++ + A +A H Q TP HL ALL DP G + I AGG+ A
Sbjct: 1 MNIEKFTERSRGFLQAAQTIAVRDYHQQLTPEHLLKALLDDPEGAASSLIRAAGGQ--AP 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ + A+ K+P Q + A+ L++++ AQ A + GD ++A D+L++ +
Sbjct: 59 AVQAAVEAALAKVPRVQGGGAGQPQATPDLVRLLDAAQTAAQKAGDEYVAQDRLLVAIAA 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
D+ G ++ G + V +R +GR V S + + +F ALK Y RD+ E Q G
Sbjct: 119 SDTPAGRALRDGGATAQALDKAVAAIR--KGRTVTSENAEASFDALKKYARDVTEIAQQG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++L+RR+KNNPVLIGEPGVGKTA+VEGLA RIV GDVP L +
Sbjct: 177 KLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEALKNK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L++LD+GALVAGAK+RGEFEERLKAVLKE+E AEG+VILFIDE+H ++GAGRT+G+MDA
Sbjct: 237 KLLSLDLGALVAGAKFRGEFEERLKAVLKEIESAEGQVILFIDEMHTLVGAGRTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG L CIGATTL+EYRKY+EKDAA RRFQ VYV EPSVPDT+SILRG+KE
Sbjct: 297 SNLIKPELARGTLHCIGATTLDEYRKYIEKDAALARRFQPVYVGEPSVPDTISILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D L
Sbjct: 357 KYELHHGVRITDNALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQIDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE A+ KE D AS+ RLV++ EL D+ +K + + EK+R++ +++L
Sbjct: 417 DRRLIQLKIEREAIRKEDDSASRERLVKLEAELADIEEKSNAMSAAWHAEKDRVNAVQKL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL-EGNQSDEN--LMLTETVG 533
K++ ++ ++ A+RR DL RA++L YG I ++ I Q E N+S +++E V
Sbjct: 477 KEQLDQARSDVEVAQRRGDLGRASELMYGVIPNLQEKIAQAQEENESAAQGAGLVSEAVT 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
IA VVSRWTG+PV R+ + E+ +L +G A+ AVA +V R+RAGL
Sbjct: 537 EQGIASVVSRWTGVPVDRMLEGERAKLLRMEDELRRSVVGQEPALKAVANAVRRARAGLQ 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTEL KALA LFDDE L+R+DMSE+ME+H+VSRLIGAPPG
Sbjct: 597 DPNRPIGSFLFLGPTGVGKTELCKALARFLFDDEKALLRVDMSEFMEKHAVSRLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEA RRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 657 YVGYEEGGVLTEAARRRPYQVILFDEVEKAHEDVFNVLLQVLDDGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+I++TSNLG++ +L+ + + ++ + +V++ VR HFRPE LNRLDEI++F L +
Sbjct: 717 IIVLTSNLGSD-VLAHLPDNESTEMVQAEVMKVVRAHFRPEFLNRLDEIILFSRLQRADM 775
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++ +Q+ + L +R + LA+ + A + E YDP+YGARP++R +++ + ++
Sbjct: 776 TRIVDIQIARLRKLLEDRHIDLALDEPAHLWLAEEGYDPVYGARPLKRVIQRTLQNPMAG 835
Query: 823 MLVREEIDENSTVYIDASPKG 843
+L+ I + TV + A G
Sbjct: 836 LLLDGTIHDGETVKVSADDVG 856
>gi|228984343|ref|ZP_04144524.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228775460|gb|EEM23845.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 866
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/874 (52%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +L + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTVLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|413955490|gb|AFW88139.1| putative chaperone clbp family protein [Zea mays]
Length = 974
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/861 (51%), Positives = 606/861 (70%), Gaps = 34/861 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT +AI + E+A + H HL +LL +G+ + + AG +N R
Sbjct: 85 EFTEMAWQAIVSSPEVAKESKHQIVETEHLMKSLLEQRNGLARRIFSKAGVDNT-----R 139
Query: 65 VFNQAMKKLPSQTPAPDEIPASTT---LIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ + K + Q E P S L +I+RA+ +K +GD++++V+ L+LG ED
Sbjct: 140 LLDATKKFIQRQPKVLGEEPGSMLGRDLEALIQRARDFKKEYGDSYVSVEHLVLGFAEDK 199
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LFK+ + V +KS +E +RGK+ + G ++AL YG+DL A GKL
Sbjct: 200 RFGTQLFKDFQITVKTLKSAIESIRGKQNVIDQDPEG--KYEALDKYGKDLTAMARQGKL 257
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L + RL
Sbjct: 258 DPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPQALTNRRL 317
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFE+RLKAVLKEV +++G+ ILFIDEIH V+GAG T G+MDA N
Sbjct: 318 IALDMGALIAGAKYRGEFEDRLKAVLKEVTDSDGQTILFIDEIHTVVGAGATNGAMDAGN 377
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +PSV DT+SILRGL+E+Y
Sbjct: 378 LLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTISILRGLRERY 437
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDE+ A +++++ S+P +D ++R
Sbjct: 438 ELHHGVRISDSALVAAAVLSDRYISGRFLPDKAIDLVDESAAKLKMEITSKPTALDEIDR 497
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+++E+E +L + DKASK RL + EL L+DK + L +++ EK + +I+ +K+
Sbjct: 498 AVLKIEMERLSLTNDTDKASKDRLSRLEAELSLLKDKQRQLTEKWEHEKSVMTKIQSIKE 557
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG++ ++++ +L+ QS ML E V
Sbjct: 558 EIDRVNVEIQQAEREYDLNRAAELKYGSLNALQRQLQTTEKELDEYQSSGKSMLREEVTQ 617
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D IAE+VSRWTGIPV++L Q+++ +R++G AV AVAE++ RSRAGL
Sbjct: 618 DDIAEIVSRWTGIPVSKLKQSDREKLLYLEEELHKRVVGQDPAVKAVAEAIQRSRAGLSD 677
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+F+GPTGVGKTELAKALA +F+ E +VRIDMSEYME+HSVSRLIGAPPGY
Sbjct: 678 PNRPIASFMFMGPTGVGKTELAKALASFMFNTEEAVVRIDMSEYMEKHSVSRLIGAPPGY 737
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRRRPYSVVLFDE+EKAH+ VFN LQ+LDDGR+TD QGR V F N++
Sbjct: 738 VGYEEGGQLTEAVRRRPYSVVLFDEIEKAHLDVFNVFLQILDDGRVTDSQGRKVSFTNSI 797
Query: 704 IIMTSNLGAEHLLS-----GMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
IIMTSN+G++++L+ G + R +V+ R FRPE +NR+DE +VF PL
Sbjct: 798 IIMTSNVGSQYILNMDEEDGSSDSAYENIKR-RVMDAARSVFRPEFMNRVDEYIVFKPLE 856
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
EQ+ + +LQ+ V R+A+R + L V+ A++ + + YDP YGARP++R +++ V
Sbjct: 857 REQINSIVKLQLARVQKRIADRKIKLDVSPGAIEFLGSLGYDPNYGARPVKRVIQQYVEN 916
Query: 819 ELSRMLVREEIDENSTVYIDA 839
EL++ ++R + + ++++D
Sbjct: 917 ELAKGILRGDFKDEDSIFVDT 937
>gi|229154838|ref|ZP_04282953.1| Chaperone protein clpB 1 [Bacillus cereus ATCC 4342]
gi|228628786|gb|EEK85498.1| Chaperone protein clpB 1 [Bacillus cereus ATCC 4342]
Length = 866
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/874 (51%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q A+ + +KK PS T + E + + L +++ RA + D +++++ ++L
Sbjct: 61 KQGAKNL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISIEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|78212541|ref|YP_381320.1| ATPase [Synechococcus sp. CC9605]
gi|78197000|gb|ABB34765.1| ATPase [Synechococcus sp. CC9605]
Length = 862
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/858 (51%), Positives = 614/858 (71%), Gaps = 25/858 (2%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENA 58
M P ++FT + AI A +LA SA H Q HL +ALL +G+ + ++ AG +
Sbjct: 1 MQPTAEQFTEQAWAAIIAAQQLAQSAKHQQLETEHLLLALLQQ-NGLAGRILSKAGVDVG 59
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A + +++ PS P+ + +L + RA+ A+ D+++A++ L+L L
Sbjct: 60 NFQA--AIDSHLRQQPSLGSPPESVFLGRSLNSCLDRAETARDGFSDSYIAIEHLLLALA 117
Query: 119 EDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D + G L +AGV +++ + +RG + V + + T+++L+ YGRDL A
Sbjct: 118 DDQRCGRQLLSQAGVDTSKLNEAITAVRGNQ--TVTDQNPEGTYESLEKYGRDLTAAARD 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 176 GKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPQALQN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LIALDMGAL+AGAKYRGEFEERLKAVLKEV +EG+++LFIDEIH V+GAG T G+MD
Sbjct: 236 RQLIALDMGALIAGAKYRGEFEERLKAVLKEVTASEGQIVLFIDEIHTVVGAGATGGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KPMLARG+LRCIGATTL+E+R+++EKD A ERRFQQV V +P+V DT+SILRGLK
Sbjct: 296 ASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVEDTISILRGLK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV AA LS+RYI R LPDKAIDLVDE+ A +++++ S+PEEID
Sbjct: 356 ERYEVHHGVRIADSALVAAAVLSSRYIADRFLPDKAIDLVDESAARLKMEITSKPEEIDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +L +E D AS+ RL + +EL DL ++ L ++++EK IDE+
Sbjct: 416 IDRKILQLEMEKLSLGRESDSASQERLQRIERELADLGEQQSSLNAQWQQEKGAIDELSS 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI----GQLEGNQSDENLMLTET 531
LK++ E + +++A+R YDL +AA+L YG + ++ + Q+ + E +L E
Sbjct: 476 LKEEIERVQLQVEQAKRSYDLNKAAELEYGTLASLQKQLLEQETQIASEEPGEKGLLREE 535
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V D IAEV+++WTGIPV RL Q+E E+L IG +AV AVA+++ RSRAG
Sbjct: 536 VSEDDIAEVIAKWTGIPVARLVQSEMEKLLQLEDDLHQRVIGQHKAVTAVADAIQRSRAG 595
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P SFLFLGPTGVGKTEL+KALA +LFD ++ +VRIDMSEYME+H+VSRLIGAP
Sbjct: 596 LSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDDAMVRIDMSEYMEKHTVSRLIGAP 655
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+E GGQLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTVDF
Sbjct: 656 PGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFT 715
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NTV+I+TSN+G++ +L + +V + +R HFRPE LNRLD+ ++F L
Sbjct: 716 NTVLILTSNIGSQSILELAGDPEQHRATESRVNEALRAHFRPEFLNRLDDQIIFHSLRRA 775
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+LR++ LQ++ + RLAER + L+++D A D + + YDP+YGARP++R +++++ T +
Sbjct: 776 ELRQIVTLQVERLRQRLAERKLELSLSDGAADWLASAGYDPVYGARPLKRAVQRELETPI 835
Query: 821 SRMLVREEIDENSTVYID 838
+++++ + ENS + +D
Sbjct: 836 AKLILSGRLGENSAIAVD 853
>gi|166368925|ref|YP_001661198.1| ClpB protein [Microcystis aeruginosa NIES-843]
gi|166091298|dbj|BAG06006.1| ClpB protein [Microcystis aeruginosa NIES-843]
Length = 872
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/857 (50%), Positives = 613/857 (71%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP +FT K EAI ++A Q HL ALL A ++ + + A+
Sbjct: 5 NPQQFTEKAWEAIVKTPDIAKQNSQQQIESEHLMKALLEQEG--LAGSVFSKANISLARL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + +++ P + D I +L ++ RA+ ++ GD ++++ LILG +D
Sbjct: 63 RDRT-DDFIRRQPKISNPGDSIYLGRSLDSLLDRAENYRREFGDDFISIEHLILGYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G ++F+E G+ ++K ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGKNIFQEFGLTENKLKEIIQQVRGSQ--KVTDQNPEGKYEALEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLLDRTL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LD+G L+AGAKYRGEFEERLKAVLKEV +++G +I+FIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDLGGLIAGAKYRGEFEERLKAVLKEVTDSQGNIIMFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADNALVAAALLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L++E D AS+ RL ++ KEL +L+++ L +++ EKE ID++R +K+
Sbjct: 420 KILQLEMERLSLQREYDPASRERLEKLEKELANLKEEQSGLNAQWQGEKEIIDKVRGVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL----MLTETVGP 534
E++ +Q+AER YD RAA+L++G + +++ + LE +D+ +L E V
Sbjct: 480 AIEQVNLEIQQAERDYDYNRAAELKFGKLTDLQRQMSALETQLADKQTTGKSLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+ +L ++ E +IG EAV AVAE++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPLNKLIESEKEKLLNLEEELHESVIGQEEAVTAVAEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD E LVRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PHRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHSVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDSQGHLVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + + +V++ +R FRPE LNR+DE ++F L QLR
Sbjct: 720 IIMTSNIGSQYILDVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDETIIFHSLQKAQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ+ +++ RL E+ +AL + D ALD + +DP+YGARP++R +++ V T +++
Sbjct: 780 SIVKLQVANLSDRLMEQKLALKLADIALDYLAEIGHDPVYGARPLKRAVQRYVETPIAKA 839
Query: 824 LVREEIDENSTVYIDAS 840
++R E T+++D +
Sbjct: 840 ILRGEFKGGDTIFVDVA 856
>gi|312622269|ref|YP_004023882.1| ATP-dependent chaperone clpb [Caldicellulosiruptor kronotskyensis
2002]
gi|312202736|gb|ADQ46063.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor kronotskyensis
2002]
Length = 864
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/860 (50%), Positives = 615/860 (71%), Gaps = 28/860 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN ++FT A+ A A H + P HL AL+++ + A+ + N G + +
Sbjct: 1 MNMERFTQSLQTALLDAQNTAIVYKHQEIGPEHLHYALVNEDDKLVAKILKNMGID--IE 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+R + +KK+P P + + + +++ RA+ K D +++V+ + L ++
Sbjct: 59 LYKRDIEEQLKKIPMVYGPGASTVYVNRYVNEILIRAEEEAKKFKDEYISVEHVYLAMI- 117
Query: 120 DSQI---GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
DS I +F++ G+ + ++ K+RG + ++ + + + ++ LK YGRDL E A
Sbjct: 118 DSDIPSSKSIFRKYGITREKFLQQLYKIRGNQ--RITNPNPEEVYEVLKKYGRDLTELAR 175
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L
Sbjct: 176 KGKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + ALD+GAL+AGAKYRGEFEERLKAVL E+ +EG++ILFIDEIH ++GAGR EG+M
Sbjct: 236 DKTIFALDLGALIAGAKYRGEFEERLKAVLNEIIASEGRIILFIDEIHNIVGAGRAEGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT++EYR+Y+EKDAA ERRFQ V V PSV DT+SILRGL
Sbjct: 296 DAGNLLKPMLARGELHCIGATTIDEYRRYIEKDAALERRFQPVLVNPPSVEDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGVRI D AL+ AA+LS RYI+ R LPDKAIDL+DEA A +R ++DS P E+D
Sbjct: 356 KERFEIHHGVRITDDALIAAAKLSDRYISDRFLPDKAIDLIDEAAALLRTEIDSMPTELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQL IE + L+KE++ ++K R+ E+ KE+ L+ + L ++ EKE I E+R
Sbjct: 416 EITRKIMQLRIEKNVLQKEENPSAKQRIEEIEKEIAQLQSRADELSAQWDYEKELIKEVR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLMLTE 530
R+K++ E + ++EAER YDL R ++L+YG + E++ A+ +LE E +L E
Sbjct: 476 RIKEEIENVKIQIEEAERNYDLNRLSELKYGKLIELQKALDRKRQELE-KIPPERRLLKE 534
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRA 579
V ++IA++VS+WTGIPV +L + E++ R++G EA+ AV +++R+RA
Sbjct: 535 EVTEEEIAKIVSKWTGIPVAKLVETERQKILELDKILHRRVVGQDEAIEAVCNAIMRARA 594
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P G+FLFLGPTGVGKTELA+ALAE LFD EN ++RIDM+EYME+HSVSRLIGA
Sbjct: 595 GIKDPRKPIGTFLFLGPTGVGKTELARALAEALFDSENNMIRIDMTEYMEKHSVSRLIGA 654
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVR +PYSVVLFDE+EKAH VFN LLQ++DDGRLTD +GRTVDF
Sbjct: 655 PPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHRDVFNILLQIMDDGRLTDSKGRTVDF 714
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NT+IIMTSNLG+E+LL+ + + + R + +E++ HFRPE LNRLDEI++F PL+
Sbjct: 715 KNTIIIMTSNLGSEYLLNAKISNGEIDEETRKLIDRELKLHFRPEFLNRLDEIIIFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
EQ+ K+ L++ ++ +L E+G+++ +T A + V+ ++D +GARPI+R+L+K V T
Sbjct: 775 KEQIIKIIDLRVAEIQQKLIEKGISIRLTQRAKEFVMENAFDVNFGARPIKRFLQKNVET 834
Query: 819 ELSRMLVREEIDENSTVYID 838
+++ +++ I E + ID
Sbjct: 835 LIAKEILKGTIVEGERIDID 854
>gi|84497608|ref|ZP_00996430.1| ATP-dependent protease ATP-binding subunit [Janibacter sp.
HTCC2649]
gi|84382496|gb|EAP98378.1| ATP-dependent protease ATP-binding subunit [Janibacter sp.
HTCC2649]
Length = 855
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/868 (53%), Positives = 605/868 (69%), Gaps = 38/868 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+NP T K EA+A+A A +AG+ + TP HL +AL P + AG A
Sbjct: 3 LNP---TTKVAEALALAQRTAQTAGNPEITPDHLVLALAEQPETSTPALLEAAGATAGAV 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+++ A+ +LP + PA + V+++A A GDTHLA D L+L L+E
Sbjct: 60 TSQ--ARSALSRLPVSSGPSTATPALGQAALAVLQQAGTLMSAKGDTHLATDLLVLALIE 117
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
I + + A AV ++ +++LR GRKV S + ++ ++L+ YG DL QA GK
Sbjct: 118 KGAISGVDRSAAKAV---EARLDELRA--GRKVTSEAQESGSESLEKYGTDLTAQARDGK 172
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP +L D R
Sbjct: 173 LDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVDGDVPESLRDKR 232
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
LI+LD+GA+VAGAK+RGEFEERLKAVL+E++ + G+++ FIDE+H V+GAG T EG+MDA
Sbjct: 233 LISLDLGAMVAGAKFRGEFEERLKAVLEEIKASNGQIVTFIDELHTVVGAGATGEGAMDA 292
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+N+ KPMLARG+LR +GATTL+E+R++VEKD A ERRFQQV+V EPSV DT++ILRGLKE
Sbjct: 293 SNMLKPMLARGELRLVGATTLDEFRQHVEKDPALERRFQQVFVGEPSVEDTIAILRGLKE 352
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HH V I+D ALV AA LS RYITGR LPDKAIDLVDEA + +R+++DS P EID L
Sbjct: 353 RYEAHHKVEIEDAALVAAATLSDRYITGRQLPDKAIDLVDEAASRLRMEIDSSPVEIDEL 412
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
R +L++E LE+E D AS RL +R +L D ++L L R+ EK ++ + +
Sbjct: 413 RRAVDRLKMEELHLERETDDASVERLARLRADLADKSEELAGLNARWDAEKSGLNRVGDI 472
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL------EGNQSDENLMLTE 530
K + +E L++A R YD A+ + +G I E+E + +QSD LM+ E
Sbjct: 473 KAQVDEARTRLEKARREYDFETASRIEFGEIPELEKQLAAADREAAASTDQSD--LMVKE 530
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRA 579
VG D IAEV+S WTGIP RL Q E E RLIG A AV AV+++V RSRA
Sbjct: 531 RVGADDIAEVISAWTGIPAGRLLQGETEKLLSMEAIIGSRLIGQASAVQAVSDAVRRSRA 590
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P +PTGSFLFLGPTGVGKTELAK+LA+ LFDDE +VRIDMSEY E+H+V+RLIGA
Sbjct: 591 GIADPDRPTGSFLFLGPTGVGKTELAKSLADFLFDDERAMVRIDMSEYSERHAVARLIGA 650
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG++EGGQLTEAVRRRPYSVVL DEVEKAH F+ LLQVLDDGRLTDGQGRTVDF
Sbjct: 651 PPGYVGYDEGGQLTEAVRRRPYSVVLLDEVEKAHPETFDILLQVLDDGRLTDGQGRTVDF 710
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
RN +++MTSNLG++ L+ M R+ V+ VRK F+PE LNRLDE+V+FDPLS
Sbjct: 711 RNVILVMTSNLGSQFLIDPTMEPA---AKREAVMAAVRKAFKPEFLNRLDEVVIFDPLSR 767
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
++L + LQ++ +A RL++R ++L VTDAA + + YDP YGARP+RR ++K++
Sbjct: 768 DELAHIVELQVRSLATRLSDRRISLEVTDAAREWLADTGYDPAYGARPLRRLVQKEIGDR 827
Query: 820 LSRMLVREEIDENSTVYIDASPKGDNLV 847
L+R L+ ++ + TV +D GD L
Sbjct: 828 LARALLAGDVRDGQTVTVDTD--GDGLT 853
>gi|49481701|ref|YP_035409.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|49333257|gb|AAT63903.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 866
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/874 (51%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + + + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDALAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ +RLA+R + + +T+AA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQVRLADRHITVQLTEAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|3360502|gb|AAC62621.1| heat shock protein [Leptolyngbya boryana]
Length = 883
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/859 (51%), Positives = 608/859 (70%), Gaps = 32/859 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
N +KFT K EAI E+ A Q HL ALL + G+ N A
Sbjct: 15 NSEKFTEKVWEAIYRTQEMYKQAQQQQIETEHLMKALL-EQDGLAISIFNKL-----AVP 68
Query: 62 AERVFNQA---MKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+RV ++ +++ P + + + ++ RA+ +K D+ ++++ L+LG
Sbjct: 69 VDRVRDRTDDFIRRQPKVSGSGTSVYWGRRADALLXRAEEYRKQFEDSFISIEHLLLGYA 128
Query: 119 EDSQIGD-LFKEAGVA-VARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+DS+ G L E A++++ +E++RG + KV + + +++L+ YGRDL + A
Sbjct: 129 QDSRFGKALLSEFRYPDEAKLRNAIEQVRGNQ--KVTDQTPENKYESLEKYGRDLTQYAR 186
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L
Sbjct: 187 EGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRILSGDVPQSLK 246
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +LIALDMGAL+AGAKYRGEFEERLKAVLKEV ++ G +ILFIDEIH V+GAG T+G+M
Sbjct: 247 DRKLIALDMGALIAGAKYRGEFEERLKAVLKEVTDSRGNIILFIDEIHTVVGAGATQGAM 306
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQV+V +PSV DT+SILRGL
Sbjct: 307 DAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVFVDQPSVEDTISILRGL 366
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGV+I D ALV AA LS RYI+ R LP KAIDLVDEA A +++++ S+PEE+D
Sbjct: 367 KERYEVHHGVKISDSALVAAATLSTRYISDRFLPSKAIDLVDEAAAKLKMEITSKPEELD 426
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
++RK +QLE+E +L+KE D S+ RL + +EL D ++ L +++ EK I +++
Sbjct: 427 EVDRKVLQLEMERLSLQKENDAGSRDRLERLERELADFKEDQSKLNAQWQAEKSVITDLQ 486
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTE 530
+LK++ + + +Q+AER YDL RAA+L+YG + E VE QL Q +L E
Sbjct: 487 KLKEEIDRVNLEIQQAERDYDLNRAAELKYGKLNELNRKVEETESQLSQIQKSGATLLRE 546
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRA 579
V IAE++S+WTGIPV++L ++E +R+IG EAV AV++++ RSRA
Sbjct: 547 EVLESDIAEIISKWTGIPVSKLVESEMQKLLQLDDVLHQRVIGQDEAVTAVSDAIQRSRA 606
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +PT SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+HSVSRLIGA
Sbjct: 607 GLSDPNRPTASFIFLGPTGVGKTELAKALAAFLFDTEEAMVRIDMSEYMEKHSVSRLIGA 666
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF
Sbjct: 667 PPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSQGRTVDF 726
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSN+G++++ + +V++ + +FRPE LNR+DEI++F L
Sbjct: 727 KNTIIIMTSNIGSQYIFEYGGDDDRYEEILSRVMEAMLSNFRPEFLNRIDEIIIFHSLQK 786
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
QLR++ ++Q + RLA R ++L ++DAALD LAE +DP+YGARP++R +++++ T
Sbjct: 787 AQLREIVKIQTHRLESRLA-RKMSLKLSDAALDF-LAEGFDPVYGARPLKRAIQRELETT 844
Query: 820 LSRMLVREEIDENSTVYID 838
+++ ++R E T+++D
Sbjct: 845 IAKEILRSNFTEGDTIFVD 863
>gi|402553341|ref|YP_006594612.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus FRI-35]
gi|401794551|gb|AFQ08410.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus FRI-35]
Length = 866
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/874 (52%), Positives = 624/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAEGL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + ++E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEVEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEDDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|167772949|ref|ZP_02445002.1| hypothetical protein ANACOL_04337 [Anaerotruncus colihominis DSM
17241]
gi|167664882|gb|EDS09012.1| ATP-dependent chaperone protein ClpB [Anaerotruncus colihominis DSM
17241]
Length = 869
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/865 (52%), Positives = 612/865 (70%), Gaps = 32/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EAI A +AT H Q HL AL S G+ Q G
Sbjct: 1 MNAQKFTQKSLEAIQEAQNIATDYSHMQIEQQHLLCALASQADGLIGQMFKKMG--ADPA 58
Query: 61 SAERVFNQAMKKLPSQT-PAPDE--IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ +K+LP + P ++ I + + + + +A+ D +++V+ ++L L
Sbjct: 59 AVAEAARDEVKRLPRVSGPGREQGKIYVTHEVDQALVQAEKLADRMKDEYVSVEHIMLAL 118
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
LE + + LF + + S + +RG +V S + + T+ ALK YG DLVEQA
Sbjct: 119 LEMPNEPLKRLFAQFNLTKDAFLSALMSVRG--NTRVTSDTPEDTYDALKKYGSDLVEQA 176
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+ EGLAQRIVRGDVP NL
Sbjct: 177 RAQKLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAIAEGLAQRIVRGDVPENL 236
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ + +LDMGAL+AGAK+RGEFEERLKAVL+E+++++G++ILFIDE+H ++GAG+TEGS
Sbjct: 237 KNRTIFSLDMGALIAGAKFRGEFEERLKAVLQEIKKSDGRIILFIDELHTIVGAGKTEGS 296
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRG
Sbjct: 297 MDAGNLLKPMLARGELHCIGATTLNEYRQYIEKDAALERRFQPVLVPEPTVEDTISILRG 356
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HGV+IQD+AL+ AA LS RYI+ R LPDKAIDLVDEACA +R ++DS P E+
Sbjct: 357 LKERYEVFHGVKIQDQALIAAAVLSNRYISDRFLPDKAIDLVDEACAVIRTEMDSMPSEL 416
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D + R+ MQ EIE AL+KE D+ S+ L E++KEL ++R++ + + R++ EK I ++
Sbjct: 417 DEISRRIMQHEIEEAALKKETDRLSQEHLHEIQKELAEMREQFKAMKARWENEKNAISKV 476
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLT 529
++L+++ E++ ++ AER YDL RAA+L+YG + +E+E + E + D L L
Sbjct: 477 QKLREELEQVNADIEAAERTYDLNRAAELKYGRLPALKKELEEEEKRAETAEKDSTL-LR 535
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
+ V ++IA +V RWTGIPV RL G+ EK ER+IG EAV+ VAE++LRSR
Sbjct: 536 DKVTEEEIARIVGRWTGIPVARLMEGEREKLLNMESILHERVIGQDEAVSKVAEAILRSR 595
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ +P GSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDM+EYME+ SVSRLIG
Sbjct: 596 AGIQDQGRPIGSFLFLGPTGVGKTELAKALAQALFDDEKNIVRIDMTEYMEKFSVSRLIG 655
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQVLDDGR+TD QGRTVD
Sbjct: 656 APPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRITDSQGRTVD 715
Query: 699 FRNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
F+NT+II+TSNLG+ ++L G+ G +T Q ARD V +++ FRPE LNRLDEIV + P
Sbjct: 716 FKNTIIILTSNLGSPYILDGIDASGNIT-QEARDAVEGLLKQQFRPEFLNRLDEIVFYKP 774
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L ++ K+ L + D+ RL+++ + L +T A ++ + YDP+YGARP++R+L+ KV
Sbjct: 775 LQKSEITKIVDLLVADLQRRLSDKQLTLELTPEAKSYIVDQGYDPVYGARPLKRFLQTKV 834
Query: 817 VTELSRMLVREEIDENS--TVYIDA 839
T L+RM++ +++ + VY+D
Sbjct: 835 ETMLARMIIADDLAPGTHLEVYMDG 859
>gi|407918968|gb|EKG12227.1| Chaperonin ClpA/B [Macrophomina phaseolina MS6]
Length = 923
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/877 (51%), Positives = 606/877 (69%), Gaps = 48/877 (5%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDP--------------SGIFAQAI 50
+FT + ++A+ A ELA H+Q PLHLAVAL+ P + +F Q +
Sbjct: 6 QFTDRASKALNDAQELAQQYAHSQLLPLHLAVALIDPPPDLSKDQQNGPGEATPLFRQVV 65
Query: 51 NNAGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAV 110
A G+ Q +R +A+ +LPSQ P PD I S + KV+R A QK D+++AV
Sbjct: 66 ERAHGD--PQLLDRSLKKALVRLPSQDPPPDHISLSPSFSKVLRSANELQKTQKDSYVAV 123
Query: 111 DQLILGLLEDSQIGDLFKEAGVAVARVKSE-VEKLRGKEGRKVESASGDTTFQALKTYGR 169
D LI L +D+ I EA + ++ E ++++RG + ++A + + LK +
Sbjct: 124 DHLIQALAQDTTIQKCLAEANIPKPKLVDEAIQQIRGSKRVDSKTADAEEENENLKKFTI 183
Query: 170 DLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRG 227
D+ A GK+DPVIGR+EEIRRV+RILSRRTKNNPVLIGEPGVGKT VVEGLA RIV
Sbjct: 184 DMTSMAREGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTVVEGLALRIVNA 243
Query: 228 DVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGA 287
DVP+NLA +L++LD+GALVAG+KYRGEFEER+K VLKE+E+++ ++LF+DEIHL++GA
Sbjct: 244 DVPANLAACKLLSLDVGALVAGSKYRGEFEERMKGVLKEIEDSKEMIVLFVDEIHLLMGA 303
Query: 288 GRT-EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPD 346
G + EG MDAANL KPMLARGQL CIGATTL EYRKY+EKD AFERRFQQV V EPS+P+
Sbjct: 304 GSSGEGGMDAANLLKPMLARGQLHCIGATTLGEYRKYIEKDQAFERRFQQVLVKEPSIPE 363
Query: 347 TVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQL 406
T+SILRGLKE+YE HHGV I D A+V AA L+ARY+T R LPD A+DLVDEA A VRV
Sbjct: 364 TISILRGLKERYETHHGVTILDGAIVSAATLAARYLTQRRLPDSAVDLVDEAAAAVRVTR 423
Query: 407 DSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKE 466
+SQPE +DNLERK QL+IE+HALE+EKD+A++ARL E + E ++ ++L+PL +Y+ E
Sbjct: 424 ESQPEALDNLERKLRQLQIEIHALEREKDEAAQARLREAKAEAANVEEELKPLREKYESE 483
Query: 467 KERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE-------- 518
KER EI+ K K ++L EAER DL+ A+DL+Y AI +VE I +LE
Sbjct: 484 KERGREIQEAKIKLDQLKIKRAEAERIGDLSTASDLQYYAIPDVEQRIAKLEHAKAKADA 543
Query: 519 ---GNQSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLA 564
+ +D +LT+ VGP+QI ++V+RWTGIPVTRL EKE+L +G
Sbjct: 544 EMYKSDTDGGSLLTDAVGPEQIQDIVARWTGIPVTRLKTTEKEKLLNMEKHLGHEVVGQK 603
Query: 565 EAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDM 624
EAVN+VA ++ R+GL P QP SFLF GP+G GKT L KALAE LFDD ++R DM
Sbjct: 604 EAVNSVANAIRLQRSGLANPNQPP-SFLFCGPSGTGKTLLTKALAEFLFDDPKAMIRFDM 662
Query: 625 SEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVL 684
SEY E+HS+SR+IGAPPGYVGH+ GGQLTEA+RRRP+S++LFDEVEKA V LLQ++
Sbjct: 663 SEYQERHSLSRMIGAPPGYVGHDAGGQLTEALRRRPFSILLFDEVEKAAKEVLTVLLQLM 722
Query: 685 DDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLL--SGMMGKVTMQVARDQVLQEVRKHFRP 742
DDGR+TDGQGR VD RN++++MTSNLGAE+L + G++ ++ V+ +R +F P
Sbjct: 723 DDGRITDGQGRIVDARNSIVVMTSNLGAEYLARPNAPDGRID-PTTKEMVMGALRNYFLP 781
Query: 743 ELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERG--VALAVTDAALDIVLAESYD 800
E LNR+ IV+F+ L+ ++RK+ L++ +V RLA+ G V + +T D + + Y
Sbjct: 782 EFLNRISSIVIFNRLTKREIRKIVDLRVSEVQKRLAQNGRNVTINMTPEVRDYLGSAGYS 841
Query: 801 PIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYI 837
P YGARP+ R +EK+V+ L+ +++R I + T +
Sbjct: 842 PAYGARPLARLIEKEVLNRLAVLILRGAIRDGETANV 878
>gi|153812816|ref|ZP_01965484.1| hypothetical protein RUMOBE_03223 [Ruminococcus obeum ATCC 29174]
gi|149831028|gb|EDM86117.1| ATP-dependent chaperone protein ClpB [Ruminococcus obeum ATCC
29174]
Length = 860
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/858 (51%), Positives = 608/858 (70%), Gaps = 29/858 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ +A+ ++A G+ + HL ALL+ + + I E
Sbjct: 1 MNISKFTQKSVQAVQDLEKVAYEYGNQEVEQEHLLYALLTQEDSLILKLI-----EKMEI 55
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ + N K L ++ ++ L K + A+ KA GD +++V+ L L LL
Sbjct: 56 NKDYFINTVKKALDAKVKVSGGDLRFGQYLNKSLVNAENEAKAMGDEYVSVEHLFLSLLT 115
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ +F E G+ R + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 116 QPSPSMKKIFNEFGITRERFLQALSTVRGNQ--RVVSDNPEATYDTLNKYGEDLVEKARN 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR ++RILSR+TKNNPVLIGEPGVGKTA +EGLAQRIV GDVP L +
Sbjct: 174 QKLDPVIGRDAEIRNIIRILSRKTKNNPVLIGEPGVGKTAAIEGLAQRIVAGDVPEGLKE 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
++ ALDMGALVAGAKYRGEFEERLKAVL+EV+++EG++ILFIDE+HL++GAG+T+G+MD
Sbjct: 234 KKIFALDMGALVAGAKYRGEFEERLKAVLEEVKKSEGEIILFIDELHLIVGAGKTDGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA RRFQ V V EP+V DT+SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALARRFQPVMVDEPTVEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 ERYEVFHGVKITDSALVAAATLSHRYITDRFLPDKAIDLVDEACALIKTELDSMPTELDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
RK MQLEIE AL+KE D SK RL +++KEL ++RD ++ EK ++++++
Sbjct: 414 QRRKIMQLEIEESALKKETDNLSKERLADLQKELAEMRDTFNTQKAQWDNEKHSVEKLQK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAA--IGQLEGNQSDENLMLTETVG 533
L+++ E++ +Q+A++ YDL +AA+L+YG + +++ I + + +SD +L + E V
Sbjct: 474 LREQIEDINKQIQKAKQNYDLEKAAELQYGELPKLQQQLEIEEKQVKESDRSL-VHEAVT 532
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLG 582
D+IA ++SRWTGIPVT+L + E+ +L+GL E V V +++LRS+AG+
Sbjct: 533 DDEIARIISRWTGIPVTKLTEGERTKLLGLEDELHKRVIGQDEGVRLVTDAILRSKAGIK 592
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAK LA LFDDE +VRIDMSEYME++SVSRLIGAPPG
Sbjct: 593 DPTKPIGSFLFLGPTGVGKTELAKTLAATLFDDEQNMVRIDMSEYMEKYSVSRLIGAPPG 652
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT
Sbjct: 653 YVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNT 712
Query: 703 VIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
++IMTSN+G+ +LL G+ G++ + A++QV+ ++R HFRPE LNRLDEI++F PL+ +
Sbjct: 713 ILIMTSNIGSPYLLEGIDENGEIKPE-AQEQVMNDLRGHFRPEFLNRLDEIILFKPLTKD 771
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + L +K+++ RLA++ ++L +TDAA V+ YDP+YGARP++R+L+ V T
Sbjct: 772 NIGGIVDLMVKELSDRLADQELSLELTDAARTQVIENGYDPVYGARPLKRYLQNYVETLA 831
Query: 821 SRMLVREEIDENSTVYID 838
++ ++ ++ T+ +D
Sbjct: 832 AKKILSGDVHAGDTLVLD 849
>gi|363890578|ref|ZP_09317905.1| ATP-dependent chaperone ClpB [Eubacteriaceae bacterium CM5]
gi|361964954|gb|EHL17954.1| ATP-dependent chaperone ClpB [Eubacteriaceae bacterium CM5]
Length = 862
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/871 (49%), Positives = 618/871 (70%), Gaps = 31/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
MN +K T K+ EA+ A A + + + +HL ALL +GI + ++ N +
Sbjct: 1 MNLEKLTQKSQEAVLQAQNTALNNSNQEIDSIHLLKALLEQDNGIIPKILSLMNINVSSL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAP-DEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ + N KLP + + + AS L +++ AQ K GD +++V+ L L +
Sbjct: 61 ISDVDDMVN----KLPKVSGSSISNVYASRKLSELLSNAQNESKNFGDEYVSVEHLFLAM 116
Query: 118 LEDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++ + I D+F + G+ +EK+RG ++V + + + T+ L+ YGRDLV+ A
Sbjct: 117 FKEKRTIISDIFSKFGIKRQDFMQRLEKIRG--NQRVTNENPEDTYNVLEKYGRDLVDMA 174
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGR++EIRR +RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRI++ DVP +L
Sbjct: 175 RNGKLDPVIGREDEIRRAIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKNDVPDSL 234
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + ALDMG+L+AGAKYRGEFEERLKA+LKE+E+++G++I+FIDEIH ++GAG+TEGS
Sbjct: 235 KDKTIFALDMGSLIAGAKYRGEFEERLKAILKEIEKSDGRIIMFIDEIHTIIGAGKTEGS 294
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATT++EYRKY+EKDAA ERRFQ + V +P+V DT+SILRG
Sbjct: 295 MDAGNLLKPMLARGELHCIGATTIDEYRKYIEKDAALERRFQPIMVDQPTVEDTISILRG 354
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
+KEK+E HHGVRI D A++ +A LS +YI R LPDKAIDL+DEA A +R Q+DS P ++
Sbjct: 355 IKEKFEIHHGVRISDSAIIASAVLSNKYINDRFLPDKAIDLMDEAAAMIRTQIDSMPTDL 414
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D++ RK MQLEIE AL+KE D+ SK RLV + +EL L+D + + E++ I ++
Sbjct: 415 DDMSRKIMQLEIEQQALKKETDEQSKKRLVVLEEELSKLKDDYKNKKATWDVERQSIGKV 474
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE--NLMLTET 531
+ L+++ E + + A+R YDL + L+YG + E+E + + Q ++ N +L E
Sbjct: 475 KELQEEIENIKHQMDIAQRNYDLETLSRLKYGKLVELEKQLQEQIKLQDEKKTNSLLKEE 534
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IA++VS+WT IPV++L + E+++L IG EAV +VA S+LR+R+G
Sbjct: 535 VTKEEIAQIVSQWTNIPVSKLVETERDKLLSLESILHKRVIGQDEAVTSVANSILRARSG 594
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSF+FLGPTGVGKTELAKAL++ LFD E+ ++RIDMSEY E+H+V+RLIGAP
Sbjct: 595 LKDPRKPIGSFIFLGPTGVGKTELAKALSQALFDSEDNIIRIDMSEYQEKHTVARLIGAP 654
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYS++LFDE+EKAH VFN LLQ+LDDGRLTD +G+TV+F+
Sbjct: 655 PGYVGYEEGGQLTEAVRRKPYSIILFDEIEKAHPEVFNILLQLLDDGRLTDSKGKTVNFK 714
Query: 701 NTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+TV+IMTSN+G++ LL + GKVT + A+ +V ++ F+PE LNR+D+I++F+PL
Sbjct: 715 DTVVIMTSNIGSQILLDSVKESGKVTDK-AKTEVEDMLKYSFKPEFLNRIDDIIMFNPLE 773
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
Q+ ++ L +KD+ RL +R + L +TD A +++ E+Y P GARP++R+L++ V T
Sbjct: 774 KSQILQIVDLCLKDIQKRLEDREIVLNITDKAKELIANEAYTPELGARPVKRYLQRNVET 833
Query: 819 ELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
L + +++ + E S V ID GD++V R
Sbjct: 834 LLGKEIIKGTVTEGSKVTIDVD--GDDIVIR 862
>gi|229160228|ref|ZP_04288227.1| Chaperone protein clpB 1 [Bacillus cereus R309803]
gi|228623189|gb|EEK80016.1| Chaperone protein clpB 1 [Bacillus cereus R309803]
Length = 866
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/872 (51%), Positives = 625/872 (71%), Gaps = 27/872 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + + +
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVD--IE 58
Query: 61 SAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ E+ +KK PS T + E + ++TL +++ RA+ D +++V+ ++L
Sbjct: 59 ALEQGIESLIKKKPSVTGSGAEAGKLYITSTLQQLLVRAEKEADKLQDDYISVEHVLLAF 118
Query: 118 LEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
E+ I L + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 119 AEEKGDINQLLTRFNITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAEVR 176
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP L
Sbjct: 177 AGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG+M
Sbjct: 237 DRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILRGL
Sbjct: 297 DAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E+D
Sbjct: 357 KERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTELD 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I ++R
Sbjct: 417 EVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVR 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTET 531
L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L E
Sbjct: 477 DLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREE 536
Query: 532 VGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAG 580
V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+RAG
Sbjct: 537 VSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIGAP
Sbjct: 597 IKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVDF+
Sbjct: 657 PGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL+
Sbjct: 717 NTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPLTA 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
+++ + +K++ RLA+R + + +TD+A + V+ +DP+YGARP++R+++++V T+
Sbjct: 777 NEIKGIVDKIVKELQGRLADRHITVELTDSAKEFVVEAGFDPMYGARPLKRYVQRQVETK 836
Query: 820 LSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
L+R L+ I +NS V +D + + LV V+
Sbjct: 837 LARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|383761689|ref|YP_005440671.1| chaperone ClpB [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381381957|dbj|BAL98773.1| chaperone ClpB [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 864
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/865 (52%), Positives = 616/865 (71%), Gaps = 26/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DKFT K A+ A LA A P HL L+ G+ + G + +
Sbjct: 1 MRFDKFTQKAQAAVLEAQSLAEQRRAATVEPEHLLYTLVHQEGGVVPSLLARIGVD--VE 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
S +R QA+ LP A ++ S L ++ AQ D + + + L+L +L
Sbjct: 59 SLDRSIEQALAALPRAQGASVQVGFSRALADILTDAQQLAGNMKDEYTSTEHLLLAMLSS 118
Query: 121 S-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ ++ L G+ V + +RG + ++ S + + ++ALK YGRDL E+A GK
Sbjct: 119 THKVKQLLARHGIDYNAVIQALAAVRGNQ--RITSDNPEAQYEALKKYGRDLTEEARKGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVPS L D +
Sbjct: 177 LDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPSTLRDKQ 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGAL+AGAKYRGEFEERLKAVL+E+ ++EG++ILFIDEIH ++GAG EG+MDAA
Sbjct: 237 VVALDMGALLAGAKYRGEFEERLKAVLQEIVKSEGRIILFIDEIHTLVGAGAAEGAMDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPMLARG+L IGATTL+EYRK++EKDAA ERRFQ V+V EPSV DT+SILRGLKE+
Sbjct: 297 NMLKPMLARGELHAIGATTLDEYRKHIEKDAALERRFQPVFVDEPSVEDTISILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D A++ AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+P+E+D ++
Sbjct: 357 YEVHHGVRITDSAVIAAATLSHRYITDRFLPDKAIDLIDEAASRLRMQIDSKPQELDEID 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ MQLEIE AL+KEKD+ S+ RL E+ KEL +LR+K L R++ EKE I +R +K
Sbjct: 417 RQIMQLEIEREALKKEKDEVSRQRLEELEKELAELREKSAQLTARWQAEKEAIQRVRSIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTETVGP 534
++ +++ +++AER YDL + A+LRYG ++++EA + Q + + +L E V
Sbjct: 477 EQIDQVRIEIEQAERAYDLQKVAELRYGKMRQLEAELAQANARVQELQKQGALLKEEVDA 536
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
++IAEVVS+WTGIPV++L ++E+E R++G EAV AVA ++ RSRAGL
Sbjct: 537 EEIAEVVSKWTGIPVSKLLESEREKLLRMEEYLHRRVVGQDEAVRAVANAIRRSRAGLQD 596
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSF+FLGPTG GKTELA++LAE LFDDE L+RIDMSEY E+H+V+RLIGAPPGY
Sbjct: 597 PNRPIGSFIFLGPTGTGKTELARSLAEYLFDDERALIRIDMSEYQERHTVARLIGAPPGY 656
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G++EGGQLTEAVRRRPYSVVLFDE+EKAH VFN LLQVLDDGRLTD QGRTVDF+NTV
Sbjct: 657 IGYDEGGQLTEAVRRRPYSVVLFDEIEKAHPEVFNVLLQVLDDGRLTDSQGRTVDFKNTV 716
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSNLG++++L ++ V + +R HFRPE LNR+DEIVVF L EQL+
Sbjct: 717 IIMTSNLGSQYILDVAEVDEEVERR---VREVLRSHFRPEFLNRIDEIVVFHALKREQLK 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +Q++ + LA+R + + +TDAA ++++ E YDP +GARP++R ++ ++ L+
Sbjct: 774 EIIDIQLERLRKLLADRRITIELTDAAKELLINEGYDPAFGARPLKRVIQHRIADPLALE 833
Query: 824 LVREEIDENSTVYIDASPKGDNLVY 848
+++ +I + V +DA GD L +
Sbjct: 834 ILQGKIQDGDHVLVDAI--GDRLTF 856
>gi|338536305|ref|YP_004669639.1| ATP-dependent chaperone protein ClpB [Myxococcus fulvus HW-1]
gi|337262401|gb|AEI68561.1| ATP-dependent chaperone protein ClpB [Myxococcus fulvus HW-1]
Length = 874
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/865 (52%), Positives = 601/865 (69%), Gaps = 31/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DK+T K EAI LA A + Q+ P HLA ALL GI + G +
Sbjct: 1 MRLDKYTVKAQEAIHEGQTLARRADNPQYEPEHLAAALLGQKDGIVDPLLRKIGADVKLF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+A +A++KLP + L+K +A+ K+ D ++ + L+L L D
Sbjct: 61 AAR--LGEALQKLPRMQGGESAM-LGQRLLKTFDKAEDEAKSLKDEFISSEHLLLALTHD 117
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+G++ K +GV RV S ++++RG GR V S + T+QAL+ YGRDL E A GK
Sbjct: 118 KGAVGEVMKSSGVTRERVLSGLKEVRGS-GR-VTSQDAEATYQALEKYGRDLTEAARSGK 175
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR V++LSRRTKNNPVLIGEPGVGKTA+ EGLA+RIV GDVP L + R
Sbjct: 176 LDPVIGRDEEIRRCVQVLSRRTKNNPVLIGEPGVGKTAIAEGLARRIVDGDVPEGLKNKR 235
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L++LD+GA+VAGAKYRGEFEERLKAVLKE+ +A G+VILFIDE+H ++GAG+ EG+MDA
Sbjct: 236 LVSLDLGAMVAGAKYRGEFEERLKAVLKEIADAAGEVILFIDELHTLVGAGKAEGAMDAG 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L CIGATTL+EYRK++EKDAA ERRFQ V V EPSV DT+SILRGLKE+
Sbjct: 296 NMLKPALARGELHCIGATTLDEYRKHIEKDAALERRFQPVLVGEPSVHDTISILRGLKER 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRIQD ALV AA LS RYI R LPDKAIDLVDEA + +R+++DS P E+D++
Sbjct: 356 YEVHHGVRIQDNALVAAATLSHRYIADRFLPDKAIDLVDEASSRLRIEIDSMPTELDDVR 415
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK QL+IE L KE D S+ RL ++ KEL +L +K L + + EK I IR LK
Sbjct: 416 RKVTQLQIEKEGLRKETDPHSQERLGQIEKELANLSEKFNALKVHWDAEKAAIGAIRSLK 475
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEA-------AIGQLEGNQSDENLMLTE 530
+K+E+ AER+ DL RAA+L++G I ++ + +L+ NQ L E
Sbjct: 476 EKQEKAKNDQAAAERQGDLNRAAELKFGVIPSLDKELRAQNEKLAELQKNQK----FLKE 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRA 579
V + IAEVV++WTGIPV+RL + E +R+IG A+ AV+ +V R+R+
Sbjct: 532 EVDAEDIAEVVAKWTGIPVSRLMEGEVQKLVHMEDRLAKRVIGQRSAIEAVSNAVRRARS 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P GSF+FLGPTGVGKTE AKALAE LFDD++ +VRIDMSEYME+HSV+RL+GA
Sbjct: 592 GLQDPNRPIGSFIFLGPTGVGKTETAKALAEFLFDDDSAMVRIDMSEYMEKHSVARLVGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRRRPY+VVLFDE+EKAH VFN LLQ+LD+GRLTD QGRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAVRRRPYTVVLFDEIEKAHHDVFNVLLQILDEGRLTDSQGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTV+I+TSNLG++ + +GM GK + + R++V+ +R HFRPE LNR+DE+V+F+PL
Sbjct: 712 KNTVLILTSNLGSQDIQAGMAGKDELDERTRNEVMDALRGHFRPEFLNRVDEVVIFEPLR 771
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
+ + ++ LQ+ ++ LA++ + L +TD A +++ YDP YGARP++R ++K ++
Sbjct: 772 KKDIYRIVDLQLARLSKLLADKRLTLELTDKARELLAERGYDPTYGARPLKRAVQKNLLD 831
Query: 819 ELSRMLVREEIDENSTVYIDASPKG 843
L+ ++ E + D P G
Sbjct: 832 PLALKVLGGEFLPGDHIQADVGPDG 856
>gi|183602738|ref|ZP_02964101.1| protease of ClpA/ClpB type [Bifidobacterium animalis subsp. lactis
HN019]
gi|241191496|ref|YP_002968890.1| ATP-binding subunit of Clp protease [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241196901|ref|YP_002970456.1| ATP-binding subunit of Clp protease [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|384194490|ref|YP_005580236.1| ATP-dependent chaperone Clp [Bifidobacterium animalis subsp. lactis
BLC1]
gi|384196057|ref|YP_005581802.1| ATP-binding subunit of Clp protease [Bifidobacterium animalis
subsp. lactis V9]
gi|387821356|ref|YP_006301399.1| ClpB protein [Bifidobacterium animalis subsp. lactis B420]
gi|387823039|ref|YP_006302988.1| ClpB protein [Bifidobacterium animalis subsp. lactis Bi-07]
gi|423680025|ref|ZP_17654901.1| ATP-dependent chaperone ClpB [Bifidobacterium animalis subsp.
lactis BS 01]
gi|183217976|gb|EDT88624.1| protease of ClpA/ClpB type [Bifidobacterium animalis subsp. lactis
HN019]
gi|240249888|gb|ACS46828.1| ATP-binding subunit of Clp protease [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240251455|gb|ACS48394.1| ATP-binding subunit of Clp protease [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|295794488|gb|ADG34023.1| ATP-binding subunit of Clp protease [Bifidobacterium animalis
subsp. lactis V9]
gi|345283349|gb|AEN77203.1| ATP-dependent chaperone Clp [Bifidobacterium animalis subsp. lactis
BLC1]
gi|366041024|gb|EHN17537.1| ATP-dependent chaperone ClpB [Bifidobacterium animalis subsp.
lactis BS 01]
gi|386654057|gb|AFJ17187.1| ClpB protein [Bifidobacterium animalis subsp. lactis B420]
gi|386655647|gb|AFJ18776.1| ClpB protein [Bifidobacterium animalis subsp. lactis Bi-07]
Length = 895
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/857 (53%), Positives = 605/857 (70%), Gaps = 30/857 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
K+T EA+ A + A++AG+ Q PLHL +LL +G+ I G A+
Sbjct: 4 KYTTLAQEALGDAVQSASAAGNPQVEPLHLLDSLLRQENGVIGGLIEAVGANRQTIGAQ- 62
Query: 65 VFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE--DS 121
A+ LPS + + + AS L + A K GD +++ + L+LG+L+ +
Sbjct: 63 -VRNALVSLPSASGSSTAQASASRQLTTALADASKEMKDMGDEYISTEHLLLGILDAAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ + ++ G+ +V++ + +RG G KV S + +++AL+ + DL +A GKLD
Sbjct: 122 EAAKILEQNGITADKVRAAIPNVRG--GAKVTSPDAEASYKALEKFSTDLTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLA+RIV GDVPS L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAERIVAGDVPSTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK VL E+++++G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 240 SLDLGSMVAGSKYRGEFEERLKGVLDEIKQSDGQIITFIDEIHTIVGAGAAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 300 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTIGDDALVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ EKE +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDPASKERLAKLQSELADAREKLAGLNARWNAEKEGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS-------DENLMLTETV 532
+E +A R DLA+A+ + YG I ++ + + E ++ M+ + V
Sbjct: 480 LDEKRVEADKATREGDLAKASRILYGEIPAIQKQLTEAEHEAEKEADFAHEDEPMVPDHV 539
Query: 533 GPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGL 581
D +A +VS WTGIPV RL G+NEK R+IG EAV AV+++V RSRAGL
Sbjct: 540 DADSVAGIVSEWTGIPVGRLMQGENEKLLNMEEYLNRRVIGQPEAVRAVSDAVRRSRAGL 599
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +PTGSFLF+GPTGVGKTELAKALAE LFDDE ++RIDMSEYME+ SVSRLIGA P
Sbjct: 600 SDPNRPTGSFLFMGPTGVGKTELAKALAEFLFDDEKAMIRIDMSEYMEKSSVSRLIGAAP 659
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRRRPYSVVLFDEVEKA+ VF+ LLQVLDDGRLTDGQGRTVDF+N
Sbjct: 660 GYVGYEEGGQLTEAVRRRPYSVVLFDEVEKANSEVFDILLQVLDDGRLTDGQGRTVDFKN 719
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T++IMTSNLG++ L++ + + Q +D V+ V FRPE LNRLD++V+F PL+ ++
Sbjct: 720 TILIMTSNLGSQFLVNPDLDE---QQKKDAVMNAVHSQFRPEFLNRLDDMVIFHPLTRQE 776
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L K+ LQ+K VA RL +R + L VT+AA + + YDP YGARP+RR ++ +V +L+
Sbjct: 777 LGKIVDLQVKQVASRLTDRRITLDVTEAAREWLADTGYDPAYGARPLRRLVQTEVGDQLA 836
Query: 822 RMLVREEIDENSTVYID 838
RML+ EI + TV +D
Sbjct: 837 RMLLAGEIKDGDTVLVD 853
>gi|374612446|ref|ZP_09685224.1| ATP-dependent chaperone ClpB [Mycobacterium tusciae JS617]
gi|373547610|gb|EHP74331.1| ATP-dependent chaperone ClpB [Mycobacterium tusciae JS617]
Length = 848
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/863 (52%), Positives = 604/863 (69%), Gaps = 36/863 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + AT+AG+ Q TP HL +ALL+ GI A + G E A
Sbjct: 4 FNP---TTKTQAALTSALQAATAAGNPQITPAHLLMALLTQNDGIAAPLLEAVGVEPATI 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
AE + + +LPS + + + + I I A D +++ + L++GL
Sbjct: 61 RAET--QRLLDRLPSASGSSSQPQLAPQSITAITTATNLATEMDDEYVSTEHLLVGLATG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
DS + L G + ++ K+RG +V + + T+QAL+ Y DL +A GK
Sbjct: 119 DSDVAKLLTNHGASPEALRDAFTKVRGSA--RVTNPDPEATYQALEKYSTDLTARAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+++LD+G++VAGAKYRGEFEERLKAVL +++ + G++I FIDE+H ++GAG T EG+MDA
Sbjct: 237 VVSLDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV V EPSV DTV ILRGLK+
Sbjct: 297 GNMIKPMLARGELRMVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKD 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+P E+D +
Sbjct: 357 RYEVHHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEVDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE AL KE+D ASK RLV++R EL D ++KL L R++ EK ID +R L
Sbjct: 417 ERLVRRLEIEEMALAKEEDDASKDRLVKLRAELADYKEKLAELTTRWQNEKGAIDIVRDL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLEGNQSDENLMLTETVGPD 535
K++ + L AER DLA+A++LRYG I EVE + L ++ EN+ML E VGPD
Sbjct: 477 KEQLDRLRGEADRAERDGDLAKASELRYGRIPEVEKKLDAALPVAEARENVMLKEEVGPD 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVS WTGIP R+ + E +R++G +AV AV+++V RSRAG+ P
Sbjct: 537 DIADVVSAWTGIPAGRMLEGETAKLLRMEGELGKRVVGQKQAVQAVSDAVRRSRAGVADP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+PTGSF+FLGPTGVGKTELAKALAE LFDDE ++RIDMSEY E+HSV+RL+GAPPGYV
Sbjct: 597 NRPTGSFMFLGPTGVGKTELAKALAEFLFDDERAMIRIDMSEYGEKHSVARLVGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+++GGQLTEAVRRRPYSV+LFDE+EKAH VF+ LL VLD+GRLTDGQGRTVDFRNT++
Sbjct: 657 GYDQGGQLTEAVRRRPYSVILFDEIEKAHPDVFDVLLAVLDEGRLTDGQGRTVDFRNTIL 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSNLGA +QV+ VR F+PE +NRLD+++VFD L+ E+L
Sbjct: 717 ILTSNLGAGG-------------TEEQVMAAVRSAFKPEFINRLDDVIVFDGLNPEELVH 763
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q++ +A RLA+R + L V+ A + +DP+YGARP+RR +++ + +L++ML
Sbjct: 764 IVDIQLEQLAKRLAQRRLTLQVSMPAKKWLSQRGFDPLYGARPLRRLIQQAIGDQLAKML 823
Query: 825 VREEIDENSTVYIDASPKGDNLV 847
+ ++ + V ++ S GD+LV
Sbjct: 824 LAGDVHDGDIVPVNVSADGDSLV 846
>gi|409051578|gb|EKM61054.1| hypothetical protein PHACADRAFT_247392 [Phanerochaete carnosa
HHB-10118-sp]
Length = 896
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/857 (52%), Positives = 601/857 (70%), Gaps = 30/857 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSG------IFAQAINNAGGENA 58
+FT KT E IA A ++A G++Q P H+A ALL++ +G +F I AGG+
Sbjct: 6 EFTDKTQETIAAAVQIARDYGNSQVIPAHIAFALLNESAGQQGGHSLFTSVIQKAGGDPI 65
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ +R ++ + + PSQ PAPDE+ K++R AQ+ QK D+++A D L+L +
Sbjct: 66 --TVQRALHKIIVRTPSQQPAPDEVNFGPAATKILREAQSIQKTMHDSYIAQDHLLLATI 123
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
++S I KE G+ A +K++++ +RG R+V+S + + F AL Y DL A G
Sbjct: 124 KESSISQALKEVGLTEAALKTQIDAIRGN--RRVDSKNAEQGFDALNKYATDLTAMAAEG 181
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DPVIGRD EIRRV+RIL RRTKNNPVLIGEPGVGKT++ EGLAQRIV DVP++L
Sbjct: 182 KIDPVIGRDNEIRRVIRILCRRTKNNPVLIGEPGVGKTSIAEGLAQRIVNRDVPASLFG- 240
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEA--EGK-VILFIDEIHLVL-GAGRTEG 292
RL +LDMGAL+AGAKY+GE+EER+K+VL EVE+A EG +ILFIDE+HL++ G+G G
Sbjct: 241 RLYSLDMGALMAGAKYKGEYEERIKSVLNEVEKAADEGTGIILFIDELHLIMAGSGSEGG 300
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
MDAANLFKP+LARG+LRCIGATTL EYRKY+EKDAA ERRF QV V EPSV + +SILR
Sbjct: 301 GMDAANLFKPLLARGKLRCIGATTLAEYRKYIEKDAALERRFAQVLVNEPSVLEAISILR 360
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
G++EKYE HHGVRI D AL+ AA L+ RY+T R LPD AIDLVDEACA+VRV ++ PE
Sbjct: 361 GIREKYEVHHGVRILDGALIQAATLAHRYLTSRRLPDSAIDLVDEACASVRVTRETSPEA 420
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
ID L+R++++LE+E+HALE+EKD+ASK RL RK + D+ D+LQPL+ +Y+ EK R +E
Sbjct: 421 IDKLQRRKLELEVEIHALEREKDEASKERLKIARKAIADVGDQLQPLLAQYEAEKARGEE 480
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLM-LTET 531
+ ++++K +EL EAERRYDLA A+DLRY A+ +++ + +LE +++E ++T
Sbjct: 481 VNQVRRKIDELKAKADEAERRYDLATASDLRYYALPDLQTRLERLEAKRAEEQAEGGSDT 540
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V PDQIAE+V+RWTGIPVTRL EKE+L +G EAV AVA ++ SR+G
Sbjct: 541 VTPDQIAEIVARWTGIPVTRLMSTEKEKLLRMEKILAESVVGQPEAVKAVANAIRLSRSG 600
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L +P SFLF GP+G GKT + K LA LFD ++RID SEY E+HS++RLIGAP
Sbjct: 601 LRNAARPIASFLFAGPSGTGKTLMTKTLATVLFDSPEAMIRIDGSEYSEKHSIARLIGAP 660
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVGH++GGQLTE +RR+PYSVVL DE+EKA LQVLDDGRLTDGQGR VDFR
Sbjct: 661 PGYVGHDQGGQLTEYIRRKPYSVVLIDEIEKASREFVQLFLQVLDDGRLTDGQGRVVDFR 720
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+I+MTSNLGA L G V Q R V+ ++ HF PE +NR+D+IVVF LS
Sbjct: 721 NTIIVMTSNLGASFLNDMGDGPVKPQT-RQLVMGAIQAHFPPEFVNRIDDIVVFRALSRR 779
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ K+ L++ +V RL +R + L + D A +++ Y P YGARP+ R ++ ++ L
Sbjct: 780 NILKIVDLRLAEVQERLEDRKMRLVLDDEAKQYLVSIGYSPQYGARPLNRAIQTDLLNPL 839
Query: 821 SRMLVREEIDENSTVYI 837
S M++ E++ TV +
Sbjct: 840 SVMILSEQVLPGETVQV 856
>gi|425465910|ref|ZP_18845213.1| Chaperone [Microcystis aeruginosa PCC 9809]
gi|389831758|emb|CCI25215.1| Chaperone [Microcystis aeruginosa PCC 9809]
Length = 872
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/857 (50%), Positives = 612/857 (71%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP +FT K EAI ++A Q HL ALL A ++ + + A+
Sbjct: 5 NPQQFTEKAWEAIVKTPDIAKQNSQQQIESEHLMKALLEQEG--LAGSVFSKANISLARL 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R + +++ P + D I +L ++ RA+ ++ GD ++++ LILG +D
Sbjct: 63 RDRT-DDFIRRQPKISNPGDSIYLGRSLDSLLDRAENYRREFGDDFISIEHLILGYAKDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G ++F+E G+ ++K ++++RG + KV + + ++AL+ YGRDL + A GKL
Sbjct: 122 RFGKNIFQEFGLTENKLKEIIQQVRGSQ--KVTDQNPEGKYEALEKYGRDLTQLAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP +L D L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLLDRTL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LD+G L+AGAKYRGEFEERLKAVLKEV +++G +I+FIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDLGGLIAGAKYRGEFEERLKAVLKEVTDSQGNIIMFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADNALVAAALLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L++E D AS+ RL ++ KEL +L+++ L +++ EKE ID++R +K+
Sbjct: 420 KILQLEMERLSLQREYDPASRERLEKLEKELANLKEEQSGLNAQWQGEKEIIDKVRGVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL----MLTETVGP 534
E++ +Q+AER YD RAA+L++G + +++ + LE +D+ +L E V
Sbjct: 480 AIEQVNLEIQQAERDYDYNRAAELKFGKLTDLQRQMSALETQLADKQTTGKSLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+ +L ++ E +IG EAV AVAE++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPLNKLIESEKEKLLNLEEELHESVIGQEEAVTAVAEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA LFD + LVRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 600 PHRPTASFIFLGPTGVGKTELAKALARNLFDTQEALVRIDMSEYMEKHSVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDSQGHLVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + + +V++ +R FRPE LNR+DE ++F L QLR
Sbjct: 720 IIMTSNIGSQYILDVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDETIIFHSLQKAQLR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ +++ RL E+ +AL + D ALD + +DP+YGARP++R +++ V T +++
Sbjct: 780 SIVKLQTANLSDRLMEQKLALKLADIALDYLAEIGHDPVYGARPLKRAVQRYVETPIAKA 839
Query: 824 LVREEIDENSTVYIDAS 840
++R E T+++D +
Sbjct: 840 ILRGEFKGGDTIFVDVA 856
>gi|229491315|ref|ZP_04385140.1| ATP-dependent chaperone protein ClpB [Rhodococcus erythropolis
SK121]
gi|229321772|gb|EEN87568.1| ATP-dependent chaperone protein ClpB [Rhodococcus erythropolis
SK121]
Length = 877
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/863 (52%), Positives = 604/863 (69%), Gaps = 31/863 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ T K+ EA+ A +AT GH + HL +AL+ G+ + + AG A
Sbjct: 1 MDTGSLTEKSREALQEAQNVATRMGHTEVDGEHLLLALVDQQDGLVPRLLEQAGANVDAL 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
++ ++ + + P + P ++ + L K++ A+ K D++++V+ L++ L
Sbjct: 61 RSD--LDRELSRRPKVSGPGATPGQVTITQRLAKLLDAAEREAKRLKDSYVSVEHLVMAL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ S G + GV + + K+RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 119 SEEGSASAAGRVLASHGVTRDAFLTALTKVRGNQ--RVTSATPEGAYEALEKYGRDLVSE 176
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGKLDPVIGRD EIRRV +ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP
Sbjct: 177 GRAGKLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-- 290
L D + +LDMG+LVAGAKYRGEFEERL+AVL EV+ AEG+++LF+DE+H V+GAG
Sbjct: 237 LRDKTIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGRILLFVDELHTVVGAGSVGG 296
Query: 291 EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSI 350
EGS+DA N+ KPMLARG+L IGATTL+EYRK++E DAA ERRFQ V V EPS D +SI
Sbjct: 297 EGSLDAGNMLKPMLARGELHMIGATTLDEYRKHIESDAALERRFQTVLVDEPSAEDAISI 356
Query: 351 LRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQP 410
LRGL+E+ E HGV+IQD ALV A LS RYIT R LPDKAIDLVDEACA +R ++DS P
Sbjct: 357 LRGLRERLEVFHGVKIQDGALVAAVTLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMP 416
Query: 411 EEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
E+D L RK +LEIE AL KE D ASKARL E+RKEL DLR + +++ E++ I
Sbjct: 417 AELDELTRKVTRLEIEEAALSKETDAASKARLEELRKELADLRAEADARHAQWEAERQAI 476
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENL 526
++ L+ + E L +EAER YDL RAA+LRYG I + +EAA QL Q N
Sbjct: 477 RRVQELRGELERLRHEAEEAERNYDLNRAAELRYGEITALERRLEAAEEQLATRQG-RNP 535
Query: 527 MLTETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVL 575
+L E V D+IAE+V+ WTGIPV RL + E+E R++G EAV VA++V+
Sbjct: 536 LLREVVTEDEIAEIVAAWTGIPVARLQEGEREKLLKLDEILHERVVGQDEAVQLVADAVI 595
Query: 576 RSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSR 635
R+R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E+ +VR+DMSEY E+H+VSR
Sbjct: 596 RARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQERHTVSR 655
Query: 636 LIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGR 695
LIGAPPGYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQVLDDGR+TD QGR
Sbjct: 656 LIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGR 715
Query: 696 TVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVF 754
VDFRNTVIIMTSN+G++HLL G+ ++ AR++VL E+R HFRPE LNR+D+IV+F
Sbjct: 716 QVDFRNTVIIMTSNIGSQHLLEGVTADGEIKPDARERVLAELRGHFRPEFLNRVDDIVLF 775
Query: 755 DPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEK 814
PL+ Q+ + LQ+ D+ RL+ER + L +T A ++ +DP+YGARP+RR++
Sbjct: 776 SPLTLPQIEYIVELQLADLRNRLSERQIHLDITPEARRLIAEHGFDPVYGARPLRRYIAH 835
Query: 815 KVVTELSRMLVREEIDENSTVYI 837
+V T++ R L+R EI T+ +
Sbjct: 836 EVETKIGRALLRGEIKPGGTISV 858
>gi|258542820|ref|YP_003188253.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-01]
gi|384042741|ref|YP_005481485.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-12]
gi|384051258|ref|YP_005478321.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-03]
gi|384054366|ref|YP_005487460.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-07]
gi|384057600|ref|YP_005490267.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-22]
gi|384060241|ref|YP_005499369.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-26]
gi|384063533|ref|YP_005484175.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-32]
gi|384119543|ref|YP_005502167.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-01-42C]
gi|421849531|ref|ZP_16282510.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus
NBRC 101655]
gi|421852887|ref|ZP_16285570.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|256633898|dbj|BAH99873.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-01]
gi|256636957|dbj|BAI02926.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-03]
gi|256640010|dbj|BAI05972.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-07]
gi|256643066|dbj|BAI09021.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-22]
gi|256646121|dbj|BAI12069.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-26]
gi|256649174|dbj|BAI15115.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-32]
gi|256652161|dbj|BAI18095.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655218|dbj|BAI21145.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus IFO
3283-12]
gi|371459718|dbj|GAB27713.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus
NBRC 101655]
gi|371478886|dbj|GAB30773.1| Clp protease ATP-binding subunit ClpB [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 871
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/866 (53%), Positives = 610/866 (70%), Gaps = 27/866 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT ++ + A +A + Q TP HL A+L D G + I +AGG A
Sbjct: 1 MDIAKFTDRSRGFLQAAQTIALRDFNQQLTPEHLLKAMLDDNEGAASSLIRSAGGNPEAV 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTT-LIKVIRRA-QAAQKAHGDTHLAVDQLILGLL 118
A QA+ KLP + PA+T L++++ A Q AQKA GD+ +A D+L++ +
Sbjct: 61 KA--ATEQALAKLPKVQGSGAGQPAATPELVRILDNAEQTAQKA-GDSFVAQDRLLVAIA 117
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D+ G KE G + ++ + +R +GR V S + + F ALK Y RD+ E A
Sbjct: 118 ASDTPAGRALKENGASADTLEKAITTIR--KGRTVTSENAEANFDALKKYARDVTEVALK 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++L+RR+KNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 176 GKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEALKN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LDMGALVAGAKYRGEFEERLKAVLKE+E AEG++ILFIDE+H ++GAGRT+G+MD
Sbjct: 236 KKLLSLDMGALVAGAKYRGEFEERLKAVLKEIESAEGQIILFIDEMHTLVGAGRTDGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG L CIGATTL+EYRKY+EKDAA RRFQ V+V EPSV DT+SILRG+K
Sbjct: 296 ASNLIKPELARGTLHCIGATTLDEYRKYIEKDAALARRFQPVFVGEPSVADTISILRGIK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+D
Sbjct: 356 EKYELHHGVRITDGALVAAATLSNRYITDRFLPDKAIDLIDEAASRLRMQIDSKPEELDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE AL KE D ASK RL V EL DL +K L + EK R++ I++
Sbjct: 416 LDRRIIQLKIEREALRKEDDTASKDRLEAVEAELADLEEKSNTLSAAWHAEKNRVNTIQK 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTETV 532
L+++ ++ ++ A+R+ DL RA++L YG I ++A I + + + + ++ +++E V
Sbjct: 476 LQEQLDQARSDVEVAQRKGDLGRASELMYGVIPNLQAQIAEAQKTEEETAKKDDLVSEAV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
+A VVSRWTG+PV R+ + E+ +L +G +A+ AV+ +V R+RAGL
Sbjct: 536 TDQGVASVVSRWTGVPVDRMLEGERAKLLRMEDELRKSVVGQEQALKAVSNAVRRARAGL 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTEL KALA LFDD+ L+RIDMSE+ME+H+V+RLIGAPP
Sbjct: 596 QDPNRPIGSFLFLGPTGVGKTELTKALARFLFDDDKALLRIDMSEFMEKHAVARLIGAPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRN
Sbjct: 656 GYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGRTVDFRN 715
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+II+TSNLG+E+L + G+ + + + QV++ VR+HFRPE LNRLDEI++F L
Sbjct: 716 TLIILTSNLGSEYLANLPDGE-SPDMVQAQVMKVVREHFRPEFLNRLDEIILFSRLQKAD 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ +Q+ + L +R + L + + A + E YDPIYGARP++R +++ + L+
Sbjct: 775 MTKIVDIQIARLQQLLDDRKITLHLDNLAEAWLANEGYDPIYGARPLKRVIQRTLQNPLA 834
Query: 822 RMLVREEIDENSTVYIDASPKGDNLV 847
L+ I + TV I A+ GD L+
Sbjct: 835 EQLLEGNILDGETVNISAN--GDGLL 858
>gi|168216816|ref|ZP_02642441.1| clpB protein [Clostridium perfringens NCTC 8239]
gi|182381023|gb|EDT78502.1| clpB protein [Clostridium perfringens NCTC 8239]
Length = 866
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/860 (50%), Positives = 607/860 (70%), Gaps = 25/860 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK T + +++ A+E+A + Q +HL AL++ G+ G
Sbjct: 1 MNADKMTLRVQQSLNDAYEIAVKYNNQQLDIIHLFSALVNQKDGLIPNIFEKMGVN--ID 58
Query: 61 SAERVFNQAMKKLP---SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S +R + + ++P + + A+ + +V+ +A+ K D++++V+ ++L +
Sbjct: 59 SLKRDIHVQIDRMPKVLGEAAQSSGVTATRRINEVLIKAEEISKQFEDSYISVEHVMLAM 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE- 173
++ + +G++ ++ + + ++RG + +V+S + T++AL YG +L+E
Sbjct: 119 IDIDKNGAVGEILRKNNITKDGFLKVLNEVRGSQ--RVDSQDPEGTYEALDKYGTNLIEL 176
Query: 174 -QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
+ KLDPVIGRDEEIRR VRILSR+TKNNP+LIGEPGVGKTA+VEGLA+RIVRGDVP
Sbjct: 177 VKQHKLDPVIGRDEEIRRAVRILSRKTKNNPILIGEPGVGKTAIVEGLAERIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D +I+LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EGK++LFIDEIH ++GAG+T+G
Sbjct: 237 LKDKVIISLDMGALIAGAKYRGEFEERLKAVLKEVQSSEGKILLFIDEIHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V V EP+V +TVSILR
Sbjct: 297 AMDAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVIVEEPTVEETVSILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHG+RI D A+V AA+LS RYI R+LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLKERFEIHHGIRIHDSAIVAAAKLSHRYIQDRYLPDKAIDLIDEAGAMIRSEIDSLPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK + LE E AL KE D ASK RLV + KEL +L+DK + ++Y+KEK I
Sbjct: 417 LDIIRRKILMLETEKEALSKENDDASKERLVALEKELAELQDKNDEMTIKYEKEKSHISA 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTE 530
+R LK + +E ++ ER YDL + A+L+YG I E+E I + E + + +EN +L E
Sbjct: 477 VRDLKAELDEARGLAEKYEREYDLNKVAELKYGKIPELERKIKEQEASMEKDNENALLKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRA 579
V ++I+E++S+WTGIPVT+L ++ +ER+IG EA AVA +V+R+RA
Sbjct: 537 EVTENEISEIISKWTGIPVTKLVESEREKLLRLEEELRERVIGQDEATTAVANAVIRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL ++P GSF+FLGPTGVGKTELAK LA LFD E+ +VRIDMSEYME+H+VSRLIG
Sbjct: 597 GLKDERKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIVRIDMSEYMEKHAVSRLIGP 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHDDVFNLFLQILDDGRLTDNKGKTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSN+G+ +LL G+ R+ V+ E++ F+PE LNR+D+I++F PLS
Sbjct: 717 KNTIIIMTSNIGSGYLLENKSGEGIEDDIRENVMNEMKLRFKPEFLNRVDDIIMFRPLSS 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E ++K+ + ++DV RL ER + L VTD A +I+ E YDP+YGARP++R++ + TE
Sbjct: 777 EGIKKIIDIFLRDVENRLRERNITLEVTDGAKEILAEEGYDPVYGARPLKRYISNVLETE 836
Query: 820 LSRMLVREEIDENSTVYIDA 839
+++ ++ EI + S ID
Sbjct: 837 IAKKIISGEIYDGSVALIDG 856
>gi|166032466|ref|ZP_02235295.1| hypothetical protein DORFOR_02181 [Dorea formicigenerans ATCC
27755]
gi|166026823|gb|EDR45580.1| ATP-dependent chaperone protein ClpB [Dorea formicigenerans ATCC
27755]
Length = 861
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/856 (51%), Positives = 611/856 (71%), Gaps = 25/856 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + +A+ ++A G+ + HL ALL+ + A+ + G +
Sbjct: 1 MNINKFTQNSLQAVQNCEKIAMDYGNQELAQEHLLYALLTQDDSLIAKLMEKMGLDKN-M 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
RV ++++KLP + L V+ A+ + GD +++V+ L L +++
Sbjct: 60 VINRV-EESLRKLPKVQGGQQYV--GQALNNVLVHAEDEARQMGDEYVSVEHLFLAMIKY 116
Query: 121 S--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ ++ + +E G++ + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 117 AGKEMKSILRELGISRDGFLQALSSVRGNQ--RVTSDNPEATYDTLNKYGSDLVERAREQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 175 KLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMGALVAGAKYRGEFEERLKAVL+EV+ ++GK+ILFIDE+H ++GAG+T+G+MDA
Sbjct: 235 TIFSLDMGALVAGAKYRGEFEERLKAVLEEVKNSDGKIILFIDELHTIVGAGKTDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V D +SILRGLKE
Sbjct: 295 GNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVEEPTVEDAISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D L
Sbjct: 355 RYEVFHGVKITDGALVAAATLSDRYISDRFLPDKAIDLVDEACALIKTELDSMPTELDEL 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK MQLEIE AL+KE+D+ SK RL +++EL +LR + ++ EK ++ ++RL
Sbjct: 415 NRKIMQLEIEETALKKEEDRLSKERLEHLQQELAELRAEFAGKKAQWDNEKVGVERVQRL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+++ E++ +++A+ YDL +AA+L+YG + +++ + Q E DE+L L E+V +
Sbjct: 475 REEIEQVNKDIEKAQHSYDLDKAAELQYGKLPQLQKQLEQEEEKVKDEDLSLVHESVTDE 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA +VSRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+ P
Sbjct: 535 EIARIVSRWTGIPVAKLNESERNKTLHLADELHKRVIGQDEGVELVTEAIIRSKAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALA LFDDEN +VRIDMSEYME++SVSRLIGAPPGYV
Sbjct: 595 TKPIGSFLFLGPTGVGKTELAKALAASLFDDENNMVRIDMSEYMEKYSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT++
Sbjct: 655 GYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTIL 714
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+++LL GM G ++ + ++ V+ ++R HFRPE LNRLDE ++F PL+ + +
Sbjct: 715 IMTSNIGSQYLLDGMDDHGNISEE-SQTMVMNDLRAHFRPEFLNRLDETIMFKPLTKDNI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L + DV RLA+R + + +T+ A +++ YDP YGARP++R+L+K V T ++
Sbjct: 774 YDIIDLLVADVNKRLADREIQIKLTEEAKKMIVDGGYDPNYGARPLKRYLQKNVETLAAK 833
Query: 823 MLVREEIDENSTVYID 838
++++ +I T+ ID
Sbjct: 834 LMLQGDIGTGDTIVID 849
>gi|441511212|ref|ZP_20993101.1| chaperone ClpB [Gordonia aichiensis NBRC 108223]
gi|441444682|dbj|GAC51062.1| chaperone ClpB [Gordonia aichiensis NBRC 108223]
Length = 876
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/862 (53%), Positives = 601/862 (69%), Gaps = 29/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
M+ T K+ EA+ A LAT GH + HL +AL+ G+ + + AG A
Sbjct: 1 MDTGSLTEKSREALQEAQNLATRMGHTEVDGEHLLLALVDQQDGLVPRLLEQAGANVDAL 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
ER ++ K+ P ++ + L K++ A+ K D++++V+ L++ L
Sbjct: 61 RSDLERELSR-RPKVSGPGATPGQVMITQRLAKLLDAAEREAKRLKDSYVSVEHLVMALS 119
Query: 119 ED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ- 174
E+ S G + GV + + +RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 120 EEGSTSAAGRVLTSHGVTREAFLTALTTVRGNQ--RVTSATPEGAYEALEKYGRDLVSEG 177
Query: 175 -AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
AGKLDPVIGRD EIRRV +ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP L
Sbjct: 178 RAGKLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT--E 291
D + +LDMG+LVAGAKYRGEFEERL+AVL EV+ AEG+++LF+DE+H V+GAG E
Sbjct: 238 RDKTIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGRILLFVDELHTVVGAGSVGGE 297
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
GS+DA N+ KPMLARG+L IGATTL+EYRK++E DAA ERRFQ V V EP + D +SIL
Sbjct: 298 GSLDAGNMLKPMLARGELHMIGATTLDEYRKHIESDAALERRFQTVLVDEPGIEDAISIL 357
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RGL+E+ E HGV+IQD ALV A LS RYIT R LPDKAIDLVDEACA +R ++DS P
Sbjct: 358 RGLRERLEVFHGVKIQDGALVAAVTLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPA 417
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
E+D L RK +LEIE AL KE D ASKARL E+RKEL DLR + +++ E++ I
Sbjct: 418 ELDELTRKVTRLEIEEAALSKETDAASKARLEELRKELADLRAEADARHAQWEAERQAIR 477
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLM 527
++ L+ + E L +EAER YDL RAA+LRYG I E +EAA QL Q N +
Sbjct: 478 RVQELRGELERLRHEAEEAERNYDLNRAAELRYGEITELERRLEAAEEQLATRQG-RNPL 536
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLR 576
L E V D+IAE+V+ WTGIPV RL + E+ ER+IG EAV VA++V+R
Sbjct: 537 LREVVTEDEIAEIVAAWTGIPVARLQEGEREKLLKLDEILHERVIGQDEAVQLVADAVIR 596
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
+R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E+ +VR+DMSEY E+H+VSRL
Sbjct: 597 ARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQERHTVSRL 656
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
IGAPPGY+G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQVLDDGR+TD QGR
Sbjct: 657 IGAPPGYIGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQ 716
Query: 697 VDFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFD 755
VDFRNTVIIMTSN+G++HLL G+ ++ AR++VL E+R HFRPE LNR+D+IV+F
Sbjct: 717 VDFRNTVIIMTSNIGSQHLLEGVTADGEIKPDARERVLAELRGHFRPEFLNRVDDIVLFT 776
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PL+ Q+ + LQ+ D+ RL+ER + L +T A ++ +DP+YGARP+RR++ +
Sbjct: 777 PLTLPQIEHIVELQLADLRNRLSERQIHLDITPEARRLIAEHGFDPVYGARPLRRYIAHE 836
Query: 816 VVTELSRMLVREEIDENSTVYI 837
V T + R L+R EI+ T+ +
Sbjct: 837 VETRIGRALLRGEIEPGGTISV 858
>gi|218896206|ref|YP_002444617.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus G9842]
gi|228899853|ref|ZP_04064098.1| Chaperone protein clpB 1 [Bacillus thuringiensis IBL 4222]
gi|228906906|ref|ZP_04070773.1| Chaperone protein clpB 1 [Bacillus thuringiensis IBL 200]
gi|423361240|ref|ZP_17338742.1| chaperone ClpB [Bacillus cereus VD022]
gi|434374216|ref|YP_006608860.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
thuringiensis HD-789]
gi|218542688|gb|ACK95082.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus G9842]
gi|228852654|gb|EEM97441.1| Chaperone protein clpB 1 [Bacillus thuringiensis IBL 200]
gi|228859757|gb|EEN04172.1| Chaperone protein clpB 1 [Bacillus thuringiensis IBL 4222]
gi|401080345|gb|EJP88634.1| chaperone ClpB [Bacillus cereus VD022]
gi|401872773|gb|AFQ24940.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
thuringiensis HD-789]
Length = 866
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/874 (51%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPA---STTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ + L ++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYITGALQQLFVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|347750804|ref|YP_004858369.1| ATP-dependent chaperone ClpB [Bacillus coagulans 36D1]
gi|347583322|gb|AEO99588.1| ATP-dependent chaperone ClpB [Bacillus coagulans 36D1]
Length = 861
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/858 (51%), Positives = 611/858 (71%), Gaps = 29/858 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T E +A A +LA H + HL L+ P + + N G + +
Sbjct: 1 MDINRMTFTVQEGLAEAQQLAAQKHHPELDIAHLWKTLMEKPDSLLPEIYNGLG--LSKE 58
Query: 61 SAERVFNQAMKKLPSQT--PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
++ + + K P T AP S LI++ R A+ +A D +++V+ L L ++
Sbjct: 59 EIGKIADGILAKKPEVTGQSAP---YLSAALIELFRLAEEEMRALQDEYISVEHLALAVM 115
Query: 119 EDSQIGDL--FKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--Q 174
D + DL + ++ + ++ ++ +RG + KV S + + T+ LK YG DLVE +
Sbjct: 116 -DVEHDDLSRYLKSRITKQQLLQVIKNIRGNQ--KVASQNPEATYNVLKKYGTDLVEAVK 172
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
AGK+DPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 173 AGKIDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 232
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + +LD+GALVAGAK+RGEFEERLKAVL+E++++ G+++LFIDE+H ++GAG+TEG+M
Sbjct: 233 DKTIFSLDLGALVAGAKFRGEFEERLKAVLQEIKKSNGQILLFIDELHTIVGAGKTEGAM 292
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL EYR+Y+EKDAA ERRFQQV V EP V DT+SILRGL
Sbjct: 293 DAGNMLKPMLARGELHCIGATTLNEYRQYIEKDAALERRFQQVLVQEPDVEDTISILRGL 352
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
+E++E HHGVRI D+ALV AA LS RYIT R LPDKAIDLVDEACAN+RV++DS P E+D
Sbjct: 353 RERFEIHHGVRIHDKALVAAATLSNRYITDRFLPDKAIDLVDEACANIRVEMDSMPTELD 412
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ MQLEIE AL+KE D+ASKARL ++KEL +L+++ + +++ EK + +++
Sbjct: 413 EVTRRVMQLEIEEAALQKETDEASKARLGILQKELANLKEEANRMRAKWQAEKAELQKVQ 472
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE---NLMLTET 531
++ E+ L+EAE RYDL +AA+LR+G I VE + QLE +++ +L E
Sbjct: 473 EKRELLEKYRRDLEEAENRYDLNKAAELRHGRIPAVEKELKQLEQQMAEKEGSGRILREE 532
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IA +V+RWTGIPV +L Q+E+E+L IG EAV V+++VLR+RAG
Sbjct: 533 VTEEEIAAIVARWTGIPVAKLVQSEREKLLKLESILHERVIGQDEAVRLVSDAVLRARAG 592
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P +P GSF+FLGPTGVGKTELAKALA+ LFDDEN ++RIDMSEYME+ +VSRLIGAP
Sbjct: 593 MKDPNRPIGSFIFLGPTGVGKTELAKALAQHLFDDENHMIRIDMSEYMEKFAVSRLIGAP 652
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQVLDDGR+TD QGRTVDF+
Sbjct: 653 PGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQVLDDGRITDSQGRTVDFK 712
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
N ++IMTSN+G+ +LL + G + ++ V+ ++ FRPE LNR+D+I++F PL+ E
Sbjct: 713 NAIVIMTSNIGSSYLLD-IKGDDISEETKNAVMAQLHASFRPEFLNRIDDIILFKPLTLE 771
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + M ++A RLAE+ V L ++D A + +YDP+YGARP++R+++ ++ T L
Sbjct: 772 NMMGIVDKMMHELAARLAEQSVGLQLSDEAKKWIAESAYDPVYGARPLKRFIQHQIETRL 831
Query: 821 SRMLVREEIDENSTVYID 838
++ ++ ++ + TV +D
Sbjct: 832 AKEIIAGKVKPHQTVTLD 849
>gi|206977690|ref|ZP_03238582.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus H3081.97]
gi|206744118|gb|EDZ55533.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus H3081.97]
Length = 866
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/874 (51%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRTKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLGEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|298674540|ref|YP_003726290.1| ATP-dependent chaperone ClpB [Methanohalobium evestigatum Z-7303]
gi|298287528|gb|ADI73494.1| ATP-dependent chaperone ClpB [Methanohalobium evestigatum Z-7303]
Length = 880
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/871 (51%), Positives = 608/871 (69%), Gaps = 24/871 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN + FT KT EA+ + +A H Q HL +ALL G+ + + + + +
Sbjct: 1 MNGENFTQKTYEALQNSTTIAARYRHQQIDCEHLLLALLEQKDGLIPRILQKM--DISPE 58
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ + +A+ + PS + P +++ S L +V+ A + GD +++V+ L+ GLL+
Sbjct: 59 TIIKKVEKALSESPSVSGPGSEQVYMSQRLKRVLDTAGKEAEQMGDEYVSVEHLLFGLLK 118
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
DS G + AGV ++ ++++RG +KV + + + T++AL+ YG D E A
Sbjct: 119 ESDSSSGKILSNAGVTREYLQQVLKEIRG--DKKVTTENPEETYEALEKYGIDFTELAKQ 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD EIR V+ILSRR KNNPVLIGE GVGKTA+VEGLAQR+ GDVP ++A+
Sbjct: 177 GKLDPVIGRDREIRHTVKILSRRRKNNPVLIGEAGVGKTAIVEGLAQRVANGDVPEDMAN 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
R+IALDMGAL+AGAKYRGEFE+RLK+VLKEV E+EG++ILFIDE+H V+GAG EGSMD
Sbjct: 237 KRIIALDMGALIAGAKYRGEFEDRLKSVLKEVSESEGQIILFIDELHTVVGAGAAEGSMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KPMLARG+L CIGATTL+EYRK +EKDAA ERRF V V EP V DT+SILRGLK
Sbjct: 297 ASNLLKPMLARGELHCIGATTLDEYRKNIEKDAALERRFMPVMVGEPDVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI+D ALV AA LS RYI+ R LPDKAIDLVDEA ANVR Q+DS+P ++D
Sbjct: 357 ERYEVHHGVRIKDSALVEAAVLSDRYISERFLPDKAIDLVDEAAANVRTQIDSKPTQLDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK QLEIE AL+KE D ASK RL + KEL ++R++ + L +++KEKE I E+R
Sbjct: 417 VDRKITQLEIEREALKKETDPASKERLESLEKELSNIREQSKTLREQWQKEKEIISELRS 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG--NQSDENLMLTETVG 533
K++ E+ L+ AE D A+ L+YG + ++ + E +Q + ++L E V
Sbjct: 477 FKEQIEDTKTQLERAENDNDFELASRLKYGTLIPLQRQYEEKEEELHQMQDEMLLREEVD 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
+ IAEVVS WT IPVT+L + E+E+L +G EAV AV+++V+R+ AG+
Sbjct: 537 EEDIAEVVSEWTSIPVTKLMEGEREKLTHLEDRLHNRVVGQDEAVKAVSDAVVRAHAGIK 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTELAKALA LFD+EN +VR+DMSEYME+H+VSR+IGAPPG
Sbjct: 597 DPDKPIGSFIFLGPTGVGKTELAKALAADLFDNENNMVRLDMSEYMEKHTVSRMIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QGRTVDF+NT
Sbjct: 657 YVGYEEGGQLTEAIRRRPYSVILFDEIEKAHHDVFNIMLQILDDGRLTDAQGRTVDFKNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IIMTSN+ +++ + + E+ KHFRPE LNR+DE+ +F PL+ EQL
Sbjct: 717 IIIMTSNIFVDYVHEQLENGADYSKMKSMAQNELSKHFRPEFLNRIDEVAIFRPLTKEQL 776
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++ ++++D+A RL + + L +TD A + E Y YGARP++R ++ +V TE+++
Sbjct: 777 VEIVDIKVQDLAERLIHQRLKLEITDKAKQYLAEEGYSETYGARPLQRVIQNEVETEVAK 836
Query: 823 MLVREEIDENSTVYIDASPKGDNLVYRVQKN 853
++ + E STV +D+ G +V ++K
Sbjct: 837 SIISGYVPERSTVKVDSDENG--IVINIEKT 865
>gi|168214442|ref|ZP_02640067.1| clpB protein [Clostridium perfringens CPE str. F4969]
gi|170714087|gb|EDT26269.1| clpB protein [Clostridium perfringens CPE str. F4969]
Length = 866
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/860 (50%), Positives = 607/860 (70%), Gaps = 25/860 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK T + +++ A+E+A + Q +HL AL++ G+ G
Sbjct: 1 MNADKMTLRVQQSLNDAYEIAVKYNNQQLDIIHLFSALVNQKDGLIPNIFEKMGVN--ID 58
Query: 61 SAERVFNQAMKKLP---SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S +R + + ++P + + A+ + +V+ +A+ K D++++V+ ++L +
Sbjct: 59 SLKRDIHVQIDRMPKVLGEAAQSSGVTATRRINEVLIKAEEISKQFEDSYISVEHVMLAM 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE- 173
++ + +G++ ++ + + ++RG + +V+S + T++AL YG +L+E
Sbjct: 119 IDIDKNGAVGEILRKNNITKDGFLKVLNEVRGSQ--RVDSQDPEGTYEALDKYGTNLIEL 176
Query: 174 -QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
+ KLDPVIGRDEEIRR VRILSR+TKNNP+LIGEPGVGKTA+VEGLA+RIVRGDVP
Sbjct: 177 VKQHKLDPVIGRDEEIRRAVRILSRKTKNNPILIGEPGVGKTAIVEGLAERIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D +I+LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EGK++LFIDEIH ++GAG+T+G
Sbjct: 237 LKDKVIISLDMGALIAGAKYRGEFEERLKAVLKEVQSSEGKILLFIDEIHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V V EP+V +TVSILR
Sbjct: 297 AMDAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVIVEEPTVEETVSILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHG+RI D A+V AA+LS RYI R+LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLKERFEIHHGIRIHDSAIVAAAKLSHRYIQDRYLPDKAIDLIDEAGAMIRSEIDSLPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK + LE E AL KE D ASK RLV + KEL +L+DK + ++Y+KEK I
Sbjct: 417 LDIIRRKILMLETEKEALSKENDDASKERLVALEKELAELQDKNDEMTIKYEKEKSHISA 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTE 530
+R LK + +E ++ ER YDL + A+L+YG I E+E I + E + + +EN +L E
Sbjct: 477 VRDLKAELDEARGLAEKYEREYDLNKVAELKYGKIPELERKIKEQEASMEKDNENALLKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRA 579
V ++I+E++S+WTGIPVT+L ++ +ER+IG EA AVA +V+R+RA
Sbjct: 537 EVTENEISEIISKWTGIPVTKLVESEREKLLRLEEELRERVIGQDEATTAVANAVIRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL ++P GSF+FLGPTGVGKTELAK LA LFD E+ +VRIDMSEYME+H+VSRLIG
Sbjct: 597 GLKDERKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIVRIDMSEYMEKHAVSRLIGP 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHDDVFNLFLQILDDGRLTDNKGKTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSN+G+ +LL G+ R+ V+ E++ F+PE LNR+D+I++F PLS
Sbjct: 717 KNTIIIMTSNIGSGYLLENKSGEGIEDDIRENVMNEMKLRFKPEFLNRVDDIIMFRPLSS 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E ++K+ + ++DV RL ER + L VTD A +I+ E YDP+YGARP++R++ + TE
Sbjct: 777 EGIKKIIDIFLRDVKNRLRERNITLEVTDGAKEILAEEGYDPVYGARPLKRYISNVLETE 836
Query: 820 LSRMLVREEIDENSTVYIDA 839
+++ ++ EI + S ID
Sbjct: 837 IAKKIIAGEIYDGSVALIDG 856
>gi|294678922|ref|YP_003579537.1| chaperone ClpB [Rhodobacter capsulatus SB 1003]
gi|294477742|gb|ADE87130.1| chaperone ClpB [Rhodobacter capsulatus SB 1003]
Length = 871
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/858 (51%), Positives = 609/858 (70%), Gaps = 23/858 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENA-A 59
MN +KFT ++ + A +A GH + P HL AL+ D G+ A I AGGE A
Sbjct: 1 MNMEKFTERSRGFLQAAQTIAMREGHQRVVPEHLLKALMDDDQGLSANLIKRAGGEPARV 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-L 118
Q + +F + KLP + ++ L++V+ A+ K GD+ + V+++++ L +
Sbjct: 61 QESVDLF---VSKLPKVSGGDGQVYVEQALVRVLDEAEKLAKKAGDSFVPVERMLMALAM 117
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+++ D V ++ + + +R +GR +SA+ + + ALK Y RDL A G
Sbjct: 118 VNTRAKDALDAGAVTAQKLNTAINDIR--KGRTADSANAEQGYDALKKYARDLTAAAEEG 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DP+IGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RI+ GDVP +L +
Sbjct: 176 KIDPIIGRDDEIRRTMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIINGDVPESLRNK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKA+LKE+E A G++ILFIDE+H ++GAG++EG+MDA
Sbjct: 236 KLLALDMGALIAGAKYRGEFEERLKAILKEIEAAAGEIILFIDEMHTLVGAGKSEGAMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
ANL KP LARG+L C+GATTL+EYRKYVEKDAA RRFQ V V EP+V DT+SILRG+KE
Sbjct: 296 ANLIKPALARGELHCVGATTLDEYRKYVEKDAALARRFQPVMVNEPTVEDTISILRGIKE 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEE+D L
Sbjct: 356 KYELHHGVRISDSALVAAATLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDAL 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +Q++IE AL +E D ASK RL ++ K+L D++ + + +++ E++ ++ R +
Sbjct: 416 DRQILQMQIEAEALRREDDSASKDRLEKLEKDLADVQQRAAEMTAKWQAERDMLEASRSV 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ ++ AL++A+R + A+A +L+YG I E+E + + E E M+ E V P+Q
Sbjct: 476 KEQLDQARAALEQAKREGNFAKAGELQYGRIPELERVLAEAE--TVAEGKMVEEAVRPEQ 533
Query: 537 IAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGRPQ 585
IAEVV RWTGIP +++ + E+E+L+ + E A+ AVA +V R+RAGL
Sbjct: 534 IAEVVERWTGIPTSKMLEGEREKLLKMEEELHKRVIGQDAAITAVANAVRRARAGLNDEN 593
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSFLFLGPTGVGKTEL KA+A LFDD+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 594 RPLGSFLFLGPTGVGKTELTKAVANYLFDDDAAMVRIDMSEFMEKHSVSRLIGAPPGYVG 653
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDG LTDGQGRTVDF+ T+I+
Sbjct: 654 YDEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGMLTDGQGRTVDFKQTLIV 713
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
+TSNLG++ LS + A+ +V++ VR HFRPE LNRLDE+V+FD L+ E + +
Sbjct: 714 LTSNLGSQA-LSRLPEGTDGSEAKAEVMEAVRMHFRPEFLNRLDEMVIFDRLTRENMDGI 772
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+K + RLA+R +ALA+ +AAL + E YDP++GARP++R +++ + L+ +++
Sbjct: 773 VTVQLKRLEARLAQRKIALALDEAALKWLADEGYDPVFGARPLKRVIQRALQDPLAELIL 832
Query: 826 REEIDENSTVYIDASPKG 843
+ + T+ + A P G
Sbjct: 833 AGTVKDGETLPVTAGPDG 850
>gi|427428354|ref|ZP_18918395.1| ClpB protein [Caenispirillum salinarum AK4]
gi|425882087|gb|EKV30769.1| ClpB protein [Caenispirillum salinarum AK4]
Length = 868
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/879 (51%), Positives = 620/879 (70%), Gaps = 34/879 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT ++ I A +A H Q TP HL ALL D G+ A + +AG +
Sbjct: 1 MDFEKFTDRSKGFIQAAQTIALRQNHQQVTPEHLLKALLDDKEGLAANLLRSAGADPV-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRA-QAAQKAHGDTHLAVDQLILGL-L 118
A A+ K+P A ++ + L +V+ +A QAA+KA GD+++ + ++L L
Sbjct: 59 KALEAVTAAVDKMPKVEGA--QMYVAQELGRVLDQATQAAEKA-GDSYVTAEYMLLALAT 115
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+Q G + K+AG+ ++ ++++R +GR +SAS + + ALK Y RDL E A G
Sbjct: 116 SGTQAGRVLKDAGLTADKLNGAIKEMR--QGRTAQSASAEDQYDALKKYARDLTEAAREG 173
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPV+GRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA R+V GDVP +L +
Sbjct: 174 KLDPVVGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRMVNGDVPESLQNK 233
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL+ALD+GA+VAGAK+RGEFEERLKAVL+E+ AEG+++LFIDE+H ++GAG+ EG+MDA
Sbjct: 234 RLLALDLGAMVAGAKFRGEFEERLKAVLEEITAAEGRIVLFIDEMHTLVGAGKAEGAMDA 293
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+N+ KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V EP+V DTVSILRG+KE
Sbjct: 294 SNMIKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVQEPTVEDTVSILRGIKE 353
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D +LV AA LS RYIT R LPDKAIDL+DEA + +R+++DS+PEE+D L
Sbjct: 354 KYELHHGVRIADASLVSAATLSNRYITDRFLPDKAIDLMDEASSRLRMEVDSKPEELDEL 413
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL+KE D+AS+ RL ++ KEL +L + L R++ EK+++ +L
Sbjct: 414 DRRVIQLKIEREALKKETDQASRDRLEKLEKELAELEGESAALTARWQAEKDKVASASKL 473
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE-----GNQSDENLMLTET 531
K++ ++ L+ A R +A +L+Y I ++EA + + E G + N M+ ET
Sbjct: 474 KEQLDQARSELERALRDSQYEKAGELQYATIPQLEAKLKEAEHREGDGEGTSGNSMVNET 533
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
V P+ IA VVSRWTGIPV ++ E+E R++G EAV AV+ ++ RSRAG
Sbjct: 534 VTPEHIASVVSRWTGIPVDKMLTGEREKLLRMEDNLQRRVVGQREAVVAVSNAIRRSRAG 593
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P +P GSFLFLGPTGVGKTEL KALAE LFDDE +VRIDMSE+ME+H+V+RLIGAP
Sbjct: 594 ISDPNRPMGSFLFLGPTGVGKTELTKALAEFLFDDETAMVRIDMSEFMEKHAVARLIGAP 653
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFR
Sbjct: 654 PGYVGYEEGGSLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 713
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+I+MTSNLG++ L + G+ + V R V++ VR+ FRPE LNRLDE+++F L E
Sbjct: 714 NTLIVMTSNLGSDVLANQPEGEDS-SVVRPMVMEVVREAFRPEFLNRLDEVLLFHRLFRE 772
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + +Q++ +A RL +R V L++ + + YDP+YGARP++R ++K + L
Sbjct: 773 NMAGIVDIQIRRLAKRLEDRKVTLSLDEGGRQWLADHGYDPVYGARPLKRVIQKSLENPL 832
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDA 859
+ M++ I++ TV + A +G NLV NG V+A
Sbjct: 833 AMMMLEGRIEDGETVTVTA--EGGNLVI----NGEAVEA 865
>gi|168206333|ref|ZP_02632338.1| clpB protein [Clostridium perfringens E str. JGS1987]
gi|168210020|ref|ZP_02635645.1| clpB protein [Clostridium perfringens B str. ATCC 3626]
gi|422346093|ref|ZP_16427007.1| chaperone ClpB [Clostridium perfringens WAL-14572]
gi|422874350|ref|ZP_16920835.1| clpB protein [Clostridium perfringens F262]
gi|170662172|gb|EDT14855.1| clpB protein [Clostridium perfringens E str. JGS1987]
gi|170711834|gb|EDT24016.1| clpB protein [Clostridium perfringens B str. ATCC 3626]
gi|373226715|gb|EHP49037.1| chaperone ClpB [Clostridium perfringens WAL-14572]
gi|380304658|gb|EIA16945.1| clpB protein [Clostridium perfringens F262]
Length = 866
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/860 (50%), Positives = 607/860 (70%), Gaps = 25/860 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK T + +++ A+E+A + Q +HL AL++ G+ G
Sbjct: 1 MNADKMTLRVQQSLNDAYEIAVKYNNQQLDIIHLFSALVNQKDGLIPNIFEKMGVN--ID 58
Query: 61 SAERVFNQAMKKLP---SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S +R + + ++P + + A+ + +V+ +A+ K D++++V+ ++L +
Sbjct: 59 SLKRDIHVQIDRMPKVLGEAAQSSGVTATRRINEVLIKAEEISKQFEDSYISVEHVMLAM 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE- 173
++ + +G++ ++ + + ++RG + +V+S + T++AL YG +L+E
Sbjct: 119 IDIDKNGAVGEILRKNNITKDGFLKVLNEVRGSQ--RVDSQDPEGTYEALDKYGTNLIEL 176
Query: 174 -QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
+ KLDPVIGRDEEIRR VRILSR+TKNNP+LIGEPGVGKTA+VEGLA+RIVRGDVP
Sbjct: 177 VKQHKLDPVIGRDEEIRRAVRILSRKTKNNPILIGEPGVGKTAIVEGLAERIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D +I+LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EGK++LFIDEIH ++GAG+T+G
Sbjct: 237 LKDKVIISLDMGALIAGAKYRGEFEERLKAVLKEVQSSEGKILLFIDEIHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V V EP+V +TVSILR
Sbjct: 297 AMDAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVIVEEPTVEETVSILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHG+RI D A+V AA+LS RYI R+LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLKERFEIHHGIRIHDSAIVAAAKLSHRYIQDRYLPDKAIDLIDEAGAMIRSEIDSLPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK + LE E AL KE D ASK RLV + KEL +L+DK + ++Y+KEK I
Sbjct: 417 LDIIRRKILMLETEKEALSKENDDASKERLVALEKELAELQDKNDEMTIKYEKEKSHISA 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTE 530
+R LK + +E ++ ER YDL + A+L+YG I E+E I + E + + +EN +L E
Sbjct: 477 VRDLKAELDEARGLAEKYEREYDLNKVAELKYGKIPELERKIKEQEASMEKDNENALLKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRA 579
V ++I+E++S+WTGIPVT+L ++ +ER+IG EA AVA +V+R+RA
Sbjct: 537 EVTENEISEIISKWTGIPVTKLVESEREKLLRLEEELRERVIGQDEATTAVANAVIRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL ++P GSF+FLGPTGVGKTELAK LA LFD E+ +VRIDMSEYME+H+VSRLIG
Sbjct: 597 GLKDERKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIVRIDMSEYMEKHAVSRLIGP 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHDDVFNLFLQILDDGRLTDNKGKTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSN+G+ +LL G+ R+ V+ E++ F+PE LNR+D+I++F PLS
Sbjct: 717 KNTIIIMTSNIGSGYLLENKSGEGIEDDIRENVMNEMKLRFKPEFLNRVDDIIMFRPLSS 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E ++K+ + ++DV RL ER + L VTD A +I+ E YDP+YGARP++R++ + TE
Sbjct: 777 EGIKKIIDIFLRDVENRLRERNITLEVTDGAKEILAEEGYDPVYGARPLKRYISNVLETE 836
Query: 820 LSRMLVREEIDENSTVYIDA 839
+++ ++ EI + S ID
Sbjct: 837 IAKKIIAGEIYDGSVALIDG 856
>gi|149198905|ref|ZP_01875947.1| putative ATPase with chaperone activity [Lentisphaera araneosa
HTCC2155]
gi|149138103|gb|EDM26514.1| putative ATPase with chaperone activity [Lentisphaera araneosa
HTCC2155]
Length = 860
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/857 (52%), Positives = 613/857 (71%), Gaps = 27/857 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ + FT K+ EA+A A LAT H Q H ALL + A+ I+ ++A
Sbjct: 1 MDINHFTEKSREALAAAQSLATELQHQQLDVEHFVYALLHQEPSLAARIIDRCNAKSADF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+A V Q + + P E+ S+ + I +A+ K DT+L+ + +L +
Sbjct: 61 TA--VLKQGLDA-RGKLSNPSEVYFSSRITPFISKAEKEAKKLDDTYLSAEHFLLASTHE 117
Query: 121 SQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QA 175
S+ IG + + + +K +RG G+K +S + + T++AL+ YG DLVE ++
Sbjct: 118 SKNSDIGKVLNQFDINHKSLKEACMSVRG--GQKCDSPNPENTYEALEKYGSDLVELARS 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD EIR +VRILSR+TKNNP+LIGE GVGKTA++EGLAQRIVRGDVP L D
Sbjct: 176 GKLDPVIGRDTEIRSIVRILSRKTKNNPILIGEAGVGKTAIIEGLAQRIVRGDVPEGLKD 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ +LDM AL+AGAK+RG+FEERLKAVLKE++ A+G++ILFIDEIH ++GAG+TEGS D
Sbjct: 236 KTIFSLDMTALMAGAKFRGDFEERLKAVLKEIKSADGQIILFIDEIHTIVGAGKTEGSSD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+E+RKY+EKDAA ERRFQ V V P+V DT+SILRGLK
Sbjct: 296 AGNMLKPMLARGELYCIGATTLDEHRKYIEKDAALERRFQPVMVDAPNVEDTISILRGLK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E++E HHGV+I D ALV AA LS RYI+ R LPDKAIDL+DEACA++R ++DS P E+D
Sbjct: 356 ERFEVHHGVKIADTALVAAATLSDRYISDRFLPDKAIDLMDEACASIRTEIDSMPAELDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ RK M+LEIE AL+KEKDKASK RL ++RKEL DL++ + +++KEKE I +
Sbjct: 416 ITRKIMRLEIEEVALKKEKDKASKERLQQLRKELADLQESSSTMRAQWQKEKEAIQAVSN 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS--DENLMLTETVG 533
+++ +EL Q + D R A ++Y I ++EA I +LE + EN ++ E V
Sbjct: 476 KREQLDELRTEFQNVQNSQDYERLAQIQYNDIPQLEAEIKELEEEAARVQENALIHERVE 535
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
++IA+VV+RWTGIPVTRL + EK++L IG EAV AVA++V+R+RAG+
Sbjct: 536 EEEIADVVARWTGIPVTRLVEGEKQKLLKLDETLHEKVIGQDEAVQAVADAVIRARAGIK 595
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P++P GSF+FLGPTGVGKTELAK LA LFD E+ L+RIDMSEYME+HSVSRL+GAPPG
Sbjct: 596 DPRRPIGSFIFLGPTGVGKTELAKTLAYSLFDSED-LIRIDMSEYMEKHSVSRLVGAPPG 654
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRR+PYSVVLFDE+EKAH VFN LLQ+LDDGRLTD +GRTVDFRNT
Sbjct: 655 YVGYEEGGYLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQLLDDGRLTDSRGRTVDFRNT 714
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQ--VARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
VII+TSN+G+EHLL + G+ Q AR++V+ ++R FRPE LNR+DEIV+F L
Sbjct: 715 VIILTSNIGSEHLLK-IQGQDEEQDKQARNEVMNQLRASFRPEFLNRIDEIVLFKQLQKS 773
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
++ K+ + +D++ RL ++GV L+++D A + + YDP+YGARP++R+L++++ T +
Sbjct: 774 EIVKIVSILTQDLSKRLKDQGVTLSISDDAKAFIGEQGYDPVYGARPLKRYLQRQLETMI 833
Query: 821 SRMLVREEIDENSTVYI 837
+R L+ +++++S + I
Sbjct: 834 ARKLLAGDLEDSSRINI 850
>gi|337288558|ref|YP_004628030.1| ATP-dependent chaperone ClpB [Thermodesulfobacterium sp. OPB45]
gi|334902296|gb|AEH23102.1| ATP-dependent chaperone ClpB [Thermodesulfobacterium geofontis
OPF15]
Length = 872
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/861 (50%), Positives = 613/861 (71%), Gaps = 24/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DKFT K EA+ A LA + H Q P HL AL+ GI ++ G +
Sbjct: 1 MKLDKFTFKAQEALQSAQRLAETYNHPQIEPEHLLKALVDQEGGIVPTILDRLGVNSKII 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
S++ ++ ++K P T ++ S +L +++ +A++ K D +++ + L L +++
Sbjct: 61 SSD--LDEILEKFPKLTYGTYQLYISLSLKQILDKAESLAKEMRDEYISTEHLFLSIIDS 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGK 177
++ G++ ++ G+ + K + K+R +G+++ + + +QAL+ +GRDL + +AGK
Sbjct: 119 PTRAGEILRKRGITFSNAKDVITKIR--KGQRITDQNPEEKYQALEKFGRDLTALAKAGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRV+ ILSRRTKNNPVL+GEPGVGKTA+VEGLAQRIV GDVP L D R
Sbjct: 177 LDPVIGRDEEIRRVMHILSRRTKNNPVLVGEPGVGKTAIVEGLAQRIVAGDVPEVLKDKR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+I LD+GAL+AG K+RGEFEERLKAVL+E++ +EG++ILFIDEIH ++GAG EG++DAA
Sbjct: 237 IIQLDLGALIAGTKFRGEFEERLKAVLREIQASEGEIILFIDEIHTIVGAGAAEGAIDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+LRCIGATT++EYRKY+EKD A ERRFQ VYV EP+ + ++ILRGLKEK
Sbjct: 297 NMLKPALARGELRCIGATTIDEYRKYIEKDPALERRFQPVYVDEPTPEEAIAILRGLKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D A++ A LS RYIT R+LPDKAIDL+DEA A +R+++DS P EID +E
Sbjct: 357 YEVHHGVRITDNAIIAAVMLSHRYITDRYLPDKAIDLIDEAAAKLRIEIDSMPTEIDEIE 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK QLEIE ALEKE D +K RL ++ ++L++LR + + L ++ KEKE I +IR+LK
Sbjct: 417 RKIKQLEIEKVALEKETDPKAKERLNKLLEQLNELRKEAEKLKAQWLKEKEVIQKIRKLK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAI---QEVEAAIGQLEGNQSDENLMLTETVGP 534
+K ++L Q+AER+ DL R A++ YG I Q+ + E+ L E V
Sbjct: 477 EKIDQLKIEAQQAERQGDLNRVAEIIYGMIPQLQKELEEENKKLEELQKEHKFLKEEVDA 536
Query: 535 DQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGR 583
+ IA++VS+WTGIPV RL ++E KER++G A++A+A ++ R+RAGL
Sbjct: 537 EDIAQIVSKWTGIPVHRLLESEREKLLRIEERLKERVVGQDHAISAIANALRRARAGLKD 596
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P++P GSFLF+GPTGVGKTELAKALAE +FD E+ ++RIDM+EYME+HSVSRLIGAPPGY
Sbjct: 597 PRRPIGSFLFIGPTGVGKTELAKALAEFMFDTEDAMIRIDMTEYMEKHSVSRLIGAPPGY 656
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTDG+GRTVDF+NT+
Sbjct: 657 VGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDGKGRTVDFKNTI 716
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G+ + + + ++ ++V + ++ FRPE LNR+DEI+VF+ L+ E +
Sbjct: 717 IIMTSNVGSFYFQDLSLSRKEVE---NRVFELLKSTFRPEFLNRIDEIIVFNNLTREDII 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
K+ +Q++ + RL+E+G+ L +TD A +++ YDP++GARP++R ++K + L+
Sbjct: 774 KIVDIQIRYLNERLSEKGMFLELTDKAKELLATYGYDPVFGARPLKRTIQKYIENALALK 833
Query: 824 LVREEIDENSTVYIDASPKGD 844
++ E + +D + G+
Sbjct: 834 ILEGVFSEGDKIIVDVNEAGE 854
>gi|317969669|ref|ZP_07971059.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. CB0205]
Length = 872
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/870 (51%), Positives = 620/870 (71%), Gaps = 30/870 (3%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENA 58
M+P + FT K ++ A +LA Q HL ALL+ G+ + + AG +
Sbjct: 1 MHPTAELFTEKAWASVVAAQQLAQQRRQQQMESEHLFAALLAQ-QGLANRVLEKAGVDVG 59
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
S + ++ PS + AP+ + L V+ +A ++++GD+++A++ L+L L
Sbjct: 60 TLS--QTIEAYIEGQPSLSSAPENVYLGRGLNAVLDQANGLKESYGDSYIAIEHLLLALA 117
Query: 119 EDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D + G L K+AG A++K V+ +RG + KV + + T+++L+ YGRDL + A
Sbjct: 118 SDDRCGKQLLKQAGSDAAQLKEAVQAIRGSQ--KVTDQNPEGTYESLEKYGRDLTQAARD 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 176 GKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPQALQN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LIALDMGAL+AGAKYRGEFEERLKAVLKEV +EG+++LFIDEIH V+GAG + G+MD
Sbjct: 236 RQLIALDMGALIAGAKYRGEFEERLKAVLKEVTASEGQIVLFIDEIHTVVGAGASGGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KPMLARG+LRCIGATTL+E+R+++EKD A ERRFQQV+V +P+V DT+SILRGLK
Sbjct: 296 ASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVFVDQPTVEDTISILRGLK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV AA LS+RYI R LPDKAIDLVDE+ A +++++ S+PE+ID
Sbjct: 356 ERYEVHHGVRIADNALVAAAVLSSRYIADRFLPDKAIDLVDESAARLKMEITSKPEQIDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QLE+E +L +E D ASK RL + KEL DL ++ L +++KEK IDE+
Sbjct: 416 LDRRILQLEMEKLSLGRESDAASKDRLERLEKELADLSEQQSALNAQWQKEKGSIDELSS 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTETV 532
+K++ E++ +++A+R YDL +AA+L YG + + + E + D+ +L E V
Sbjct: 476 IKEEIEQVQLQIEQAKRSYDLNKAAELEYGTLTGLHKKLAAKEEELTGEGDDKSLLREEV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
D IAEV+++WTGIPV +L Q+E ++L IG +AV AVA+++ RSRAGL
Sbjct: 536 TEDDIAEVIAKWTGIPVAKLVQSEMQKLLQLEDELHTRVIGQEQAVTAVADAIQRSRAGL 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P SFLFLGPTGVGKTEL+KALA QLFD E +VRIDMSEYME+H+VSRLIGAPP
Sbjct: 596 SDPNRPIASFLFLGPTGVGKTELSKALASQLFDSEEAMVRIDMSEYMEKHTVSRLIGAPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTVDF N
Sbjct: 656 GYVGYEEGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTN 715
Query: 702 TVIIMTSNLGAEHL--LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
TV+I+TSN+G++ + L+G + + AR V + +R HFRPE LNRLDE ++F L
Sbjct: 716 TVLILTSNIGSQSILDLAGDPARHSEMEAR--VNEALRGHFRPEFLNRLDETIIFHSLKQ 773
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E+LR++ LQ++ +A RL ++ + L V ALD + YDP+YGARP++R ++K++ T
Sbjct: 774 EELRQIVELQIQRLAKRLEDKKLGLQVNADALDWLAGVGYDPVYGARPLKRAIQKELETP 833
Query: 820 LSRMLVREEIDENSTVYIDASPKGDNLVYR 849
+++ ++ + V +D +G+ L ++
Sbjct: 834 IAKGILAGQFSAGHDVAVDV--EGETLRFQ 861
>gi|228964216|ref|ZP_04125338.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402561741|ref|YP_006604465.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
thuringiensis HD-771]
gi|228795467|gb|EEM42952.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401790393|gb|AFQ16432.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
thuringiensis HD-771]
Length = 866
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/874 (51%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPA---STTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ + L ++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTESGAEVGKLYITGALQQLFVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|402838574|ref|ZP_10887079.1| ATP-dependent chaperone protein ClpB [Eubacteriaceae bacterium
OBRC8]
gi|402272788|gb|EJU22004.1| ATP-dependent chaperone protein ClpB [Eubacteriaceae bacterium
OBRC8]
Length = 862
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/871 (49%), Positives = 618/871 (70%), Gaps = 31/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
MN +K T K+ EA+ A A + + + +HL ALL +GI + ++ N +
Sbjct: 1 MNLEKLTQKSQEAVLQAQNTALNNSNQEIDSIHLLKALLEQDNGIIPKILSLMNINVSSL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAP-DEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ + N KLP + + + AS L +++ AQ K GD +++V+ L L +
Sbjct: 61 ISDVDDMVN----KLPKVSGSSISNVYASRKLSELLSNAQIESKNFGDEYVSVEHLFLAM 116
Query: 118 LEDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++ + I D+F + G+ +EK+RG ++V + + + T+ L+ YGRDLV+ A
Sbjct: 117 FKEKRTIISDIFSKFGIKRQDFMQRLEKIRG--NQRVTNENPEDTYNVLEKYGRDLVDMA 174
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGR++EIRR +RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRI++ DVP +L
Sbjct: 175 RNGKLDPVIGREDEIRRAIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKNDVPDSL 234
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + ALDMG+L+AGAKYRGEFEERLKA+LKE+E+++G++I+FIDEIH ++GAG+TEGS
Sbjct: 235 KDKTIFALDMGSLIAGAKYRGEFEERLKAILKEIEKSDGRIIMFIDEIHTIIGAGKTEGS 294
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATT++EYRKY+EKDAA ERRFQ + V +P+V DT+SILRG
Sbjct: 295 MDAGNLLKPMLARGELHCIGATTIDEYRKYIEKDAALERRFQPIMVDQPTVEDTISILRG 354
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
+KEK+E HHGVRI D A++ +A LS +YI R LPDKAIDL+DEA A +R Q+DS P ++
Sbjct: 355 IKEKFEIHHGVRISDSAIIASAVLSNKYINDRFLPDKAIDLMDEAAAMIRTQIDSMPTDL 414
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D++ RK MQLEIE AL+KE D+ SK RLV + +EL L+D + + E++ I ++
Sbjct: 415 DDMSRKIMQLEIEQQALKKETDEQSKKRLVVLEEELSKLKDDYKNKKATWDVERQSIGKV 474
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE--NLMLTET 531
+ L+++ E + + A+R YDL + L+YG + E+E + + Q ++ N +L E
Sbjct: 475 KELQEEIENIKHQMDIAQRNYDLETLSRLKYGKLVELEKQLQEQIKLQDEKKTNSLLKEE 534
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IA++VS+WT IPV++L + E+++L IG EAV +VA S+LR+R+G
Sbjct: 535 VTEEEIAQIVSQWTNIPVSKLVETERDKLLSLESILHKRVIGQDEAVTSVANSILRARSG 594
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSF+FLGPTGVGKTELAKAL++ LFD E+ ++RIDMSEY E+H+V+RLIGAP
Sbjct: 595 LKDPRKPIGSFIFLGPTGVGKTELAKALSQALFDSEDNIIRIDMSEYQEKHTVARLIGAP 654
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYS++LFDE+EKAH VFN LLQ+LDDGRLTD +G+TV+F+
Sbjct: 655 PGYVGYEEGGQLTEAVRRKPYSIILFDEIEKAHPEVFNILLQLLDDGRLTDSKGKTVNFK 714
Query: 701 NTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+TV+IMTSN+G++ LL + GKVT + A+ +V ++ F+PE LNR+D+I++F+PL
Sbjct: 715 DTVVIMTSNIGSQILLDSVKESGKVTDK-AKTEVEDMLKYSFKPEFLNRIDDIIMFNPLE 773
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
Q+ ++ L +KD+ RL +R + L +TD A +++ E+Y P GARP++R+L++ V T
Sbjct: 774 KSQILQIVDLCLKDIQKRLEDREIVLNITDKAKELIANEAYTPELGARPVKRYLQRNVET 833
Query: 819 ELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
L + +++ + E S V ID GD++V R
Sbjct: 834 LLGKEIIKGTVTEGSKVTIDVD--GDDIVIR 862
>gi|377563590|ref|ZP_09792937.1| chaperone ClpB [Gordonia sputi NBRC 100414]
gi|377529212|dbj|GAB38102.1| chaperone ClpB [Gordonia sputi NBRC 100414]
Length = 876
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/862 (53%), Positives = 601/862 (69%), Gaps = 29/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
M+ T K+ EA+ A + T GH + HL +AL+ G+ + + AG A
Sbjct: 1 MDTGSLTEKSREALQEAQNVVTRMGHTEVDGEHLLLALVDQQEGLVPRLLEQAGANVDAL 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
ER ++ K+ P ++ + L K++ A+ K D++++V+ L++ L
Sbjct: 61 RSDLERELSR-RPKVSGPGATPGQVTITQRLAKLLDAAEREAKRLKDSYVSVEHLVMALS 119
Query: 119 ED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ- 174
E+ S G + GV + + K+RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 120 EEGSTSAAGRVLTSHGVTRDAFLTALTKVRGNQ--RVTSATPEGAYEALEKYGRDLVSEG 177
Query: 175 -AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
AGKLDPVIGRD EIRRV +ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP L
Sbjct: 178 RAGKLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT--E 291
D + +LDMG+LVAGAKYRGEFEERL+AVL EV+ AEG+++LF+DE+H V+GAG E
Sbjct: 238 RDKTIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGRILLFVDELHTVVGAGSVGGE 297
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
GS+DA N+ KPMLARG+L IGATTL+EYRK++E DAA ERRFQ V V EPSV D +SIL
Sbjct: 298 GSLDAGNMLKPMLARGELHMIGATTLDEYRKHIESDAALERRFQTVLVDEPSVEDAISIL 357
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RGL+E+ E HGV+IQD ALV A LS RYIT R LPDKAIDLVDEACA +R ++DS P
Sbjct: 358 RGLRERLEVFHGVKIQDGALVAAVTLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPA 417
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
E+D L RK +LEIE AL KE D ASK RL E+RKEL DLR + +++ E++ I
Sbjct: 418 ELDELTRKVTRLEIEEAALSKETDAASKTRLEELRKELADLRAEADARHAQWEAERQAIR 477
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVE----AAIGQLEGNQSDENLM 527
++ L+ + E L +EAER YDL RAA+LRYG I E+E AA QL Q N +
Sbjct: 478 RVQELRGELERLRHEAEEAERNYDLNRAAELRYGEITELERKLKAAEEQLATRQG-RNPL 536
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLR 576
L E V D+IAE+V+ WTGIPV RL + E+ ER+IG EAV VA++V+R
Sbjct: 537 LREVVTEDEIAEIVAAWTGIPVARLQEGEREKLLKLDEILHERVIGQDEAVQLVADAVIR 596
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
+R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E+ +VR+DMSEY E+H+VSRL
Sbjct: 597 ARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQERHTVSRL 656
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
IGAPPGYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQVLDDGR+TD QGR
Sbjct: 657 IGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQ 716
Query: 697 VDFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFD 755
VDFRNTVIIMTSN+G++HLL G+ ++ AR +VL E+R HFRPE LNR+D+IV+F
Sbjct: 717 VDFRNTVIIMTSNIGSQHLLEGVTADGEIKPDARARVLAELRGHFRPEFLNRVDDIVLFT 776
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PL+ Q+ + LQ+ D+ RL+ER + L +T A ++ +DP+YGARP+RR++ +
Sbjct: 777 PLTLPQIEHIVELQLTDLRNRLSERQIHLNITPEARRLIAEHGFDPVYGARPLRRYIAHE 836
Query: 816 VVTELSRMLVREEIDENSTVYI 837
V T++ R L+R EI+ T+ +
Sbjct: 837 VETKIGRALLRGEIEPGGTISV 858
>gi|329114582|ref|ZP_08243341.1| Chaperone protein ClpB [Acetobacter pomorum DM001]
gi|326696062|gb|EGE47744.1| Chaperone protein ClpB [Acetobacter pomorum DM001]
Length = 890
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/866 (52%), Positives = 610/866 (70%), Gaps = 27/866 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT ++ + A +A + Q TP HL A+L D G + I +AGG A
Sbjct: 20 MDIAKFTDRSRGFLQAAQTIALRDFNQQLTPEHLLKAMLDDNEGAASSLIRSAGGNPEAV 79
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTT-LIKVIRRA-QAAQKAHGDTHLAVDQLILGLL 118
A QA+ KLP + PA+T L++++ A Q AQKA GD+ +A D+L++ +
Sbjct: 80 KA--ATEQALAKLPKVQGSGAGQPAATPELVRILDNAEQTAQKA-GDSFVAQDRLLVAIA 136
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D+ G KE G + ++ + +R +GR V S + + F ALK Y RD+ E A
Sbjct: 137 ASDTPAGRALKENGASADTLEKAITTIR--KGRTVTSENAEANFDALKKYARDVTEVALK 194
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++L+RR+KNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 195 GKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEALKN 254
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LDMGALVAGAKYRGEFEERLKAVLKE+E AEG++ILFIDE+H ++GAGRT+G+MD
Sbjct: 255 KKLLSLDMGALVAGAKYRGEFEERLKAVLKEIESAEGQIILFIDEMHTLVGAGRTDGAMD 314
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG L CIGATTL+EYRKY+EKDAA RRFQ V+V EPSV DT+SILRG+K
Sbjct: 315 ASNLIKPELARGTLHCIGATTLDEYRKYIEKDAALARRFQPVFVGEPSVADTISILRGIK 374
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+D
Sbjct: 375 EKYELHHGVRITDGALVAAATLSNRYITDRFLPDKAIDLIDEAASRLRMQIDSKPEELDE 434
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE AL+KE D ASK RL V EL DL +K L + EK R++ I++
Sbjct: 435 LDRRIIQLKIEREALKKEDDTASKDRLEAVESELADLEEKSNTLSAAWHAEKNRVNTIQK 494
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTETV 532
L+++ ++ ++ A+R+ DL RA++L YG I ++ I + + + + ++ +++E V
Sbjct: 495 LQEQLDQARSDVEVAQRKGDLGRASELMYGVIPNLQGQIAEAQKTEEETAKKDDLVSEAV 554
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
+A VVSRWTG+PV R+ + E+ +L +G +A+ AV+ +V R+RAGL
Sbjct: 555 TDQGVASVVSRWTGVPVDRMLEGERAKLLRMEDELRKSVVGQEQALKAVSNAVRRARAGL 614
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTEL KALA LFDD+ L+RIDMSE+ME+H+V+RLIGAPP
Sbjct: 615 QDPNRPIGSFLFLGPTGVGKTELTKALARFLFDDDKALLRIDMSEFMEKHAVARLIGAPP 674
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRN
Sbjct: 675 GYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGRTVDFRN 734
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+II+TSNLG+E+L + G+ + + + QV++ VR+HFRPE LNRLDEI++F L
Sbjct: 735 TLIILTSNLGSEYLANLPDGE-SPDMVQAQVMKVVREHFRPEFLNRLDEIILFSRLQKAD 793
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ +Q+ + L +R ++L + A + E YDPIYGARP++R +++ + L+
Sbjct: 794 MTKIVDIQIARLQQLLDDRKISLHLDKLAEAWLANEGYDPIYGARPLKRVIQRTLQNPLA 853
Query: 822 RMLVREEIDENSTVYIDASPKGDNLV 847
L+ I + TV I A+ GD L+
Sbjct: 854 EQLLEGNILDGETVNISAN--GDGLL 877
>gi|423371256|ref|ZP_17348596.1| chaperone ClpB [Bacillus cereus AND1407]
gi|401103082|gb|EJQ11067.1| chaperone ClpB [Bacillus cereus AND1407]
Length = 866
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/874 (51%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLGEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|30261278|ref|NP_843655.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. Ames]
gi|47526441|ref|YP_017790.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Bacillus
anthracis str. 'Ames Ancestor']
gi|49184110|ref|YP_027362.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Bacillus
anthracis str. Sterne]
gi|165873044|ref|ZP_02217664.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. A0488]
gi|167641215|ref|ZP_02399469.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. A0193]
gi|170709080|ref|ZP_02899509.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. A0389]
gi|177654423|ref|ZP_02936320.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. A0174]
gi|190566715|ref|ZP_03019632.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. Tsiankovskii-I]
gi|228926310|ref|ZP_04089384.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229120795|ref|ZP_04250038.1| Chaperone protein clpB 1 [Bacillus cereus 95/8201]
gi|229603919|ref|YP_002865699.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. A0248]
gi|254725453|ref|ZP_05187235.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. A1055]
gi|254734078|ref|ZP_05191791.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. Western North America USA6153]
gi|254753618|ref|ZP_05205654.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. Vollum]
gi|254758715|ref|ZP_05210742.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. Australia 94]
gi|386734981|ref|YP_006208162.1| Chaperone protein clpB [Bacillus anthracis str. H9401]
gi|421509590|ref|ZP_15956494.1| Chaperone protein clpB [Bacillus anthracis str. UR-1]
gi|54035820|sp|Q81TT4.1|CLPB_BACAN RecName: Full=Chaperone protein ClpB
gi|30254892|gb|AAP25141.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. Ames]
gi|47501589|gb|AAT30265.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. 'Ames Ancestor']
gi|49178037|gb|AAT53413.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. Sterne]
gi|164711199|gb|EDR16756.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. A0488]
gi|167510856|gb|EDR86248.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. A0193]
gi|170126035|gb|EDS94933.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. A0389]
gi|172080707|gb|EDT65789.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. A0174]
gi|190562267|gb|EDV16235.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. Tsiankovskii-I]
gi|228662800|gb|EEL18397.1| Chaperone protein clpB 1 [Bacillus cereus 95/8201]
gi|228833407|gb|EEM78970.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229268327|gb|ACQ49964.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. A0248]
gi|384384833|gb|AFH82494.1| Chaperone protein clpB [Bacillus anthracis str. H9401]
gi|401820383|gb|EJT19549.1| Chaperone protein clpB [Bacillus anthracis str. UR-1]
Length = 866
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/874 (51%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +T+AA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVKLTEAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|338741722|ref|YP_004678684.1| protein disaggregation chaperone [Hyphomicrobium sp. MC1]
gi|337762285|emb|CCB68120.1| protein disaggregation chaperone [Hyphomicrobium sp. MC1]
Length = 863
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/852 (52%), Positives = 599/852 (70%), Gaps = 22/852 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +++T + I A LA + Q TP HL LL DP G+ + I A G++ A
Sbjct: 1 MNFERYTDRAKGFIQSAQSLALRENNQQVTPEHLLKILLDDPEGLASGLIQKASGDSRA- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
A R + K P T ++ S+ L +V + D + ++L+L L D
Sbjct: 60 -ALRAVEANLAKKPKVTGGSGQVYVSSELARVFDAVEKLADKASDKFVTAERLLLALALD 118
Query: 121 SQI--GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG-- 176
+ G + ++AGV ++ + + +R +GR +SA+ + + ALK Y RDL E AG
Sbjct: 119 TATDAGKILRDAGVTPDKINAAINDIR--KGRTADSANAEQAYDALKRYARDLTEAAGSG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV+GDVP +L
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVKGDVPESLKHK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L++LDMGAL+AGAKYRGEFEERLKAVL EVE AEG +ILFIDE+H ++GAG+TEGSMDA
Sbjct: 237 KLLSLDMGALIAGAKYRGEFEERLKAVLSEVE-AEGDIILFIDELHTIVGAGKTEGSMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KP LARG+L C+GATTL+EYRK++EKDAA RRFQ ++V EP+V DT+SILRGLKE
Sbjct: 296 GNLLKPALARGELHCVGATTLDEYRKHIEKDAALARRFQPIFVTEPTVEDTISILRGLKE 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 356 KYELHHGVRITDSALVSAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDAI 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R MQ+ IE AL+KE D ASK RL + K + DL++K + + R++ EK+++ ++L
Sbjct: 416 DRDLMQMMIEREALKKETDSASKDRLARLEKSIADLQEKSEAMTARWQAEKQKLGSAQKL 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ E L AL++A+R+ DLARA +LRYG I E+E + +E +Q + ++ E V PDQ
Sbjct: 476 KEELESLRNALEQAQRKGDLARAGELRYGKIPELEKKLADVE-SQERKGALVEEAVTPDQ 534
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
IA VVSRWTG+PV ++ + E++ R+IG EAV AV+ +V R+RAGL P
Sbjct: 535 IAAVVSRWTGVPVDKMLEGERDKLLKMEDALGKRVIGQKEAVIAVSTAVRRARAGLQDPN 594
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDD+ LVRIDMSE+ME+HSV+RLIGAPPGYVG
Sbjct: 595 RPIGSFMFLGPTGVGKTELTKALAGYLFDDDTALVRIDMSEFMEKHSVARLIGAPPGYVG 654
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY ++LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+I+
Sbjct: 655 YEEGGVLTEAVRRRPYQIILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTLIV 714
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
+TSN+GA++L+ G+ T + RD+V+ EVR FRPE LNRLD+I++F L + K+
Sbjct: 715 LTSNIGAQYLVEQKEGEET-EAVRDEVMAEVRARFRPEFLNRLDDIILFHRLQRADMTKI 773
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+ + LA+R + + + + A + YDP YGARP++R +++ V L+ ++
Sbjct: 774 VDIQIGRLQKLLADRKITIELDEQAKTWLANRGYDPAYGARPLKRVIQRNVQDPLAEQIL 833
Query: 826 REEIDENSTVYI 837
+ + TV +
Sbjct: 834 AGGVKDGDTVTV 845
>gi|415728587|ref|ZP_11472032.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6119V5]
gi|388065003|gb|EIK87508.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6119V5]
Length = 864
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/867 (51%), Positives = 612/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + A +AG+AQ LHLA ALL G+ I AG + AE
Sbjct: 4 KFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIGAE- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
A+ LPS T + P AS L+ + +A+ +A GD +++ + +++G++ E +
Sbjct: 63 -IRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMRAMGDEYVSTEHMLIGIVASEPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 122 AVADIFKKHNVSADALRKAVPTVRG--GAKVTSPDAEGNYKALEKYSVDMTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVLKE+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 240 SLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EYR+++EKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 300 LKPMLARGELRLVGATTLNEYREHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A++ RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDAAARERLEKLQEELANSREKLSGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E ++ E + PDQ
Sbjct: 480 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESQAANAKSEAKEPMVPDQVDA 539
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 540 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 600 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 660 IGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PL+ E+L
Sbjct: 720 LIMTSNLGSQFLVQEGLDDAA---KRKAVMNAVHAEFKPEFINRLDELVMFHPLTREELG 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ VA RL++R ++L V+D+A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 777 GIVDIQVRQVAARLSDRRISLDVSDSARTWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 836
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + V D D++ ++
Sbjct: 837 LLSGKVHDGARVVADCENTSDHVTLKI 863
>gi|217958749|ref|YP_002337297.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus AH187]
gi|229137959|ref|ZP_04266558.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST26]
gi|375283242|ref|YP_005103680.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus NC7401]
gi|423354238|ref|ZP_17331864.1| chaperone ClpB [Bacillus cereus IS075]
gi|423569805|ref|ZP_17546051.1| chaperone ClpB [Bacillus cereus MSX-A12]
gi|217067573|gb|ACJ81823.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus AH187]
gi|228645616|gb|EEL01849.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST26]
gi|358351768|dbj|BAL16940.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus NC7401]
gi|401087439|gb|EJP95643.1| chaperone ClpB [Bacillus cereus IS075]
gi|401205343|gb|EJR12146.1| chaperone ClpB [Bacillus cereus MSX-A12]
Length = 866
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/874 (52%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAEGL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEDDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|218781272|ref|YP_002432590.1| ATP-dependent chaperone ClpB [Desulfatibacillum alkenivorans AK-01]
gi|218762656|gb|ACL05122.1| ATP-dependent chaperone ClpB [Desulfatibacillum alkenivorans AK-01]
Length = 862
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/868 (51%), Positives = 612/868 (70%), Gaps = 29/868 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DKFT K+ E + A LA + GH Q P H A+L + G+ G
Sbjct: 1 MRFDKFTIKSQELLGEAQNLAVTKGHQQIEPEHFVSAMLMEDKGMARSMFRKMGVSPDGV 60
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ E F ++++P + A E S +V++ A A D +++++ ++L +
Sbjct: 61 ANE--FAALIERMPRVSGAGAGESYLSPRSKQVLQNAMAEASKMKDEYVSLEHILLAI-A 117
Query: 120 DSQIGD---LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
D + GD G+ + ++ +RG + +V + + +QAL+ Y RDL E A
Sbjct: 118 DEKHGDASRTLASHGITKDTLLKVLQNIRGSQ--RVTDQNPEEKYQALEKYSRDLTELAR 175
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD+EIRR+V++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIVRGDV +L
Sbjct: 176 IGKLDPVIGRDDEIRRIVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVSESLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ RL+ALDMG+L+AGAKYRGEFE+RLKAVLKEVE+AEG+VILFIDE+H ++GAG TEG+M
Sbjct: 236 NRRLVALDMGSLIAGAKYRGEFEDRLKAVLKEVEDAEGEVILFIDEMHTLVGAGATEGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA+N+ KP LARG LRC+GATTL EYRKY+EKDAA ERRF V+ AEP+V DT+SILRGL
Sbjct: 296 DASNMLKPALARGSLRCVGATTLNEYRKYIEKDAALERRFAPVFAAEPTVQDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KEKYE HHGVRI D A+V AA LS RYI+ R LPDKAIDLVDE + +R+++DS P+EID
Sbjct: 356 KEKYEVHHGVRITDAAIVAAATLSDRYISDRFLPDKAIDLVDECASKLRIEIDSMPQEID 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
++R+ Q +IE AL+KEKD ASK RL ++ E+ ++ + ++ + ++ EKE IDEI
Sbjct: 416 EVQRRITQAQIERQALKKEKDAASKERLAKLELEISEMEESMREMKYHWQNEKEAIDEIT 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTET 531
R+K+ +E L ++AER+ DL R A+LRYG E++ A+ Q ++ + ML E
Sbjct: 476 RIKETQERLSIEEEQAERQGDLNRVAELRYGKANELKRAMEQAHAKLAELQKDRKMLKEE 535
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
V + +AEVVSRWTGIPV+++ ++EKE R+IG +A+ AV+ +V R+R+G
Sbjct: 536 VDDEDVAEVVSRWTGIPVSKMLESEKEKLVRMESRLEKRVIGQNDAIVAVSNAVRRARSG 595
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P GSF+F+GPTGVGKTELAKALAE +FDD+ +VR+DMSEYME+HSVSRLIGAP
Sbjct: 596 LQDPNRPIGSFIFMGPTGVGKTELAKALAEFIFDDDQAIVRVDMSEYMEKHSVSRLIGAP 655
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG++EGG LTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LDDGR+TDG G+TVDF+
Sbjct: 656 PGYVGYDEGGYLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRMTDGHGKTVDFK 715
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSN+G++ + +G + R +V+ +R FRPE LNR+DE V+F+ LS E
Sbjct: 716 NTIIIMTSNVGSQFIQD--LGSSNPEEMRRRVMDALRATFRPEFLNRVDETVIFNSLSVE 773
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
L +V R+Q + RL ++ V L +T+ AL ++ + YDP YGARP++R +++ + +L
Sbjct: 774 DLAQVVRIQTDRLIKRLTDQHVNLVITEEALVLLGQKGYDPAYGARPLKRVIQRSLENQL 833
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVY 848
+ +++ +I +STV +DA +GD++V+
Sbjct: 834 ALLILEGKIHPDSTVTVDA--QGDDIVF 859
>gi|383454395|ref|YP_005368384.1| ATP-dependent chaperone protein ClpB [Corallococcus coralloides DSM
2259]
gi|380732359|gb|AFE08361.1| ATP-dependent chaperone protein ClpB [Corallococcus coralloides DSM
2259]
Length = 874
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/865 (52%), Positives = 597/865 (69%), Gaps = 31/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DK+T K EAI LA A + + P HLA ALL GI + G +
Sbjct: 1 MRLDKYTVKAQEAIQEGQSLARRADNPHYEPEHLAAALLGQKDGIVDPLLRKIGVDVKLF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ +A++KLP I S L+K +A+ KA D + + L+L L +D
Sbjct: 61 AGR--LGEALQKLPRIQGGESAI-LSQRLMKTFDKAEDEAKALKDEFTSSEHLLLALTQD 117
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+G+ K +GV RV++ ++++RG +V SA ++T+QAL+ YGRDL E A GK
Sbjct: 118 KGAVGEAMKSSGVTRERVQAGLKEVRGSS--RVTSADAESTYQALEKYGRDLTEAARSGK 175
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA+RIV GDVP L + R
Sbjct: 176 LDPVIGRDEEIRRCIQVLSRRTKNNPVLIGEPGVGKTAIAEGLARRIVDGDVPEGLKNKR 235
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
LI LD+GA+VAGAKYRGEFEERLKAVLKEV +A G++ILFIDE+H ++GAG+ EG+MDA
Sbjct: 236 LITLDLGAMVAGAKYRGEFEERLKAVLKEVADAAGEIILFIDEMHTLVGAGKAEGAMDAG 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L CIGATTL+EYRK++EKDAA ERRFQ V+V EP+V DT+SILRGLKE+
Sbjct: 296 NMLKPALARGELHCIGATTLDEYRKHIEKDAALERRFQPVFVGEPTVHDTISILRGLKER 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRIQD ALV AA LS RYI+ R LPDKAIDLVDEA + +R+++DS P EID++
Sbjct: 356 YEVHHGVRIQDSALVAAATLSHRYISDRFLPDKAIDLVDEASSRLRIEIDSMPTEIDDIR 415
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK QLEIE L KE D S+ RL + KEL +L +K L + +EK+ I +R LK
Sbjct: 416 RKVTQLEIEREGLRKETDPHSRERLSTIEKELANLNEKFNSLKAHWDEEKKAIAALRSLK 475
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-------GQLEGNQSDENLMLTE 530
+K+E+ AER+ DL RAA+L++G I +E + +L+ NQ L E
Sbjct: 476 EKQEKARNDQAAAERQGDLNRAAELKFGVIPSLEKEVAAQNEKLAELQKNQK----FLKE 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRA 579
V + IA VV++WTGIPV++L + E ER+IG + AV+ +V R+R+
Sbjct: 532 EVDSEDIASVVAKWTGIPVSKLMEGEMQKLVKMEDRLAERVIGQRSPIEAVSNAVRRARS 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P GSF+FLGPTGVGKTE AKALAE LFDD+ +VRIDMSEYME+H+VSRL+GA
Sbjct: 592 GLQDPNRPIGSFIFLGPTGVGKTETAKALAEFLFDDDTAMVRIDMSEYMEKHAVSRLVGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRRRPY+VVLFDE+EKAH VFN LLQ+LD+GR+TD QGRTVDF
Sbjct: 652 PPGYVGYEEGGQLTEAVRRRPYTVVLFDEIEKAHHDVFNILLQILDEGRVTDSQGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
RNTV+I+TSN+G++ + GM G T+ + R +V++ +R HFRPE LNR+DEIV+F+PL
Sbjct: 712 RNTVLILTSNIGSQAIQEGMAGTDTLNEKTRGEVMEALRAHFRPEFLNRVDEIVIFEPLR 771
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
+ + ++ +Q+ + L + + L +TD+A +++ YDP YGARP++R ++K ++
Sbjct: 772 KKDIYRIVDIQLGKLQKLLQAKRLTLDLTDSARELLAERGYDPTYGARPLKRAVQKYLLD 831
Query: 819 ELSRMLVREEIDENSTVYIDASPKG 843
L+ ++ E + DA P G
Sbjct: 832 PLAIKVLNGEFAPGEHIQADAGPDG 856
>gi|27376515|ref|NP_768044.1| ATP-dependent protease ATP-binding subunit [Bradyrhizobium
japonicum USDA 110]
gi|54035839|sp|Q89UL2.1|CLPB_BRAJA RecName: Full=Chaperone protein ClpB
gi|27349656|dbj|BAC46669.1| ATP-dependent protease ATP-binding subunit [Bradyrhizobium
japonicum USDA 110]
Length = 879
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/864 (52%), Positives = 612/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T ++ I A LA GH QF+ LH+ LL D G+ A I+ AGG ++
Sbjct: 1 MNIEKYTERSRGFIQSAQSLAVREGHQQFSTLHVLKVLLDDNEGLAAGLIDRAGGN--SR 58
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ + A+ K+P + +I + L + A+ A + GD+ + V++L+LGL
Sbjct: 59 AILKATEDALNKVPKVSGGGAGQIYLAPELARTFDAAEKAGEKAGDSFVTVERLLLGLTL 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ S+ G + + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 EKTSEAGTILSKGGVTPQNLNAAIEALR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LD+GAL+AGAKYRGEFEERLKAVL+EV +EG ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLSLDLGALIAGAKYRGEFEERLKAVLQEVTGSEGTFILFIDEMHTLIGAGKGDGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EY+K+VEKDAA RRFQ ++V+EPSV DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPIFVSEPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV +A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L+IE AL+KE D SK+RL + KEL +L +K L R+ EK ++ + ++
Sbjct: 417 MDREIIRLKIEQEALKKESDAGSKSRLQTLEKELVELEEKSASLTARWSAEKNKLSDAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + +A +L YG I E+E + +E + + M+ E V +
Sbjct: 477 LKAELDGLRVELANAQRRGEFQKAGELAYGRIPELERQLADIEAKE-NSGEMMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EK++L +G AEAV+AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKDKLLKMEDSLGKRVVGQAEAVHAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T V R+QV+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSEFLVNQPEGEDTSAV-REQVMGMVRGHFRPEFLNRVDEIILFHRLQRSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L +R + L + AA D + A+ +DP YGARP++R +++ + L+ M+
Sbjct: 775 IVEIQFARLQKLLTDRKIVLTLDGAARDWLAAKGWDPAYGARPLKRVIQRYLQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ ++ + V I S +G+ L +
Sbjct: 835 LAGDVKDGDNVAI--SSEGNVLTF 856
>gi|383774614|ref|YP_005453683.1| ATP-dependent protease ATP-binding subunit [Bradyrhizobium sp.
S23321]
gi|381362741|dbj|BAL79571.1| ATP-dependent protease ATP-binding subunit [Bradyrhizobium sp.
S23321]
Length = 879
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/864 (52%), Positives = 607/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK+T ++ + A LA GH QF+ LH+ LL D G+ A I+ AGG + A
Sbjct: 1 MNIDKYTERSRGFVQSAQSLAVREGHQQFSTLHVLKVLLDDNEGLAAGLIDRAGGNSRA- 59
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ A+ K+P + +I + L + A+ A + GD+ + V++L+LGL
Sbjct: 60 -ILKATEDALAKVPKVSGGGAGQIYLAPELARTFDAAEKAGEKAGDSFVTVERLLLGLTL 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ S+ G + + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 EKTSEAGVILAKGGVTPQNLNAAIEALR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPEGLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LDMG+L+AGAKYRGEFEERLKAVL+EV AEG +ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLSLDMGSLIAGAKYRGEFEERLKAVLQEVTSAEGSIILFIDEMHTLIGAGKGDGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ ++V EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPIFVPEPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRITDSALVAATTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L+IE AL+KE D SK+RL + KEL +L +K L R+ EK ++ + ++
Sbjct: 417 MDREIIRLKIEQEALKKESDAGSKSRLQTLEKELAELEEKSSALTARWSAEKNKLSDAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L +A+RR + +A +L YG I ++E + +E ++ M+ E V +
Sbjct: 477 LKAELDGLRIDLADAQRRGEFQKAGELAYGRIPQLEKQLADIEAKENSGE-MMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EKE+L +G AEAV AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKEKLLKMEGQLGQRVVGQAEAVRAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T V R+ V+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSEFLVNQPEGEDTSAV-REHVMATVRTHFRPEFLNRVDEIILFHRLQKSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L +R + L + A D + + +DP YGARP++R +++ V L+ M+
Sbjct: 775 IVEIQFSRLERLLTDRKIVLTLDGKARDWLAEKGWDPAYGARPLKRVVQRYVQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ +I + V I S +G+ L +
Sbjct: 835 LAGDIKDGDAVAI--SSEGNVLTF 856
>gi|18310410|ref|NP_562344.1| clpB protein [Clostridium perfringens str. 13]
gi|54035872|sp|Q8XKG8.1|CLPB_CLOPE RecName: Full=Chaperone protein ClpB
gi|18145090|dbj|BAB81134.1| clpB protein [Clostridium perfringens str. 13]
Length = 866
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/860 (50%), Positives = 607/860 (70%), Gaps = 25/860 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK T + +++ A+E+A + Q +HL AL++ G+ G
Sbjct: 1 MNADKMTLRVQQSLNDAYEIAVKYNNQQLDIIHLFSALVNQKDGLIPNIFEKMGVN--ID 58
Query: 61 SAERVFNQAMKKLPS---QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S +R + + ++P + + A+ + +V+ +A+ K D++++V+ ++L +
Sbjct: 59 SLKRDIHVQIDRMPKVLGEAAQSSGVTATRRINEVLIKAEEISKQFEDSYISVEHVMLAM 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE- 173
++ + +G++ ++ + + ++RG + +V+S + T++AL YG +L+E
Sbjct: 119 IDIDKNGAVGEILRKNNITKDGFLKVLNEVRGSQ--RVDSQDPEGTYEALDKYGTNLIEL 176
Query: 174 -QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
+ KLDPVIGRDEEIRR VRILSR+TKNNP+LIGEPGVGKTA+VEGLA+RIVRGDVP
Sbjct: 177 VKQHKLDPVIGRDEEIRRAVRILSRKTKNNPILIGEPGVGKTAIVEGLAERIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D +I+LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EGK++LFIDEIH ++GAG+T+G
Sbjct: 237 LKDKVIISLDMGALIAGAKYRGEFEERLKAVLKEVQSSEGKILLFIDEIHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V V EP+V +TVSILR
Sbjct: 297 AMDAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVIVEEPTVEETVSILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHG+RI D A+V AA+LS RYI R+LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLKERFEIHHGIRIHDSAIVAAAKLSHRYIQDRYLPDKAIDLIDEAGAMIRSEIDSLPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK + LE E AL KE D ASK RLV + KEL +L+DK + ++Y+KEK I
Sbjct: 417 LDIIRRKILMLETEKEALSKENDDASKERLVALEKELAELQDKNDEMTIKYEKEKSHISA 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTE 530
+R LK + +E ++ ER YDL + A+L+YG I E+E I + E + + +EN +L E
Sbjct: 477 VRDLKAELDEARGLAEKYEREYDLNKVAELKYGKIPELERKIKEQEASMEKDNENALLKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRA 579
V ++I+E++S+WTGIPVT+L ++ +ER+IG EA AVA +V+R+RA
Sbjct: 537 EVTENEISEIISKWTGIPVTKLVESEREKLLRLEEELRERVIGQDEATTAVANAVIRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL ++P GSF+FLGPTGVGKTELAK LA LFD E+ +VRIDMSEYME+H+VSRLIG
Sbjct: 597 GLKDERKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIVRIDMSEYMEKHAVSRLIGP 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHDDVFNLFLQILDDGRLTDNKGKTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSN+G+ +LL G+ R+ V+ E++ F+PE LNR+D+I++F PLS
Sbjct: 717 KNTIIIMTSNIGSGYLLENKSGEGIEDDIRENVMNEMKLRFKPEFLNRVDDIIMFRPLSS 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E ++K+ + ++DV RL ER + L VTD A +I+ E YDP+YGARP++R++ + TE
Sbjct: 777 EGIKKIIDIFLRDVENRLRERNITLEVTDRAKEILAEEGYDPVYGARPLKRYISNVLETE 836
Query: 820 LSRMLVREEIDENSTVYIDA 839
+++ ++ EI + S ID
Sbjct: 837 IAKKIIAGEIYDGSVALIDG 856
>gi|42780361|ref|NP_977608.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus ATCC 10987]
gi|54035773|sp|Q73BY1.1|CLPB_BACC1 RecName: Full=Chaperone protein ClpB
gi|42736280|gb|AAS40216.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus ATCC 10987]
Length = 866
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/874 (51%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAEGL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEDDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIASTITDNSHVVVDV--ENNELVVHVK 866
>gi|423481144|ref|ZP_17457834.1| chaperone ClpB [Bacillus cereus BAG6X1-2]
gi|401146660|gb|EJQ54174.1| chaperone ClpB [Bacillus cereus BAG6X1-2]
Length = 866
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/874 (51%), Positives = 625/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + TL +++ RA + D +++++ ++L
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEAGKLYVTGTLQQLLVRAGKEAEKLQDDYISIEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTKFHITKNNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|386867604|ref|YP_006280598.1| ATP-dependent chaperone ClpB [Bifidobacterium animalis subsp.
animalis ATCC 25527]
gi|385701687|gb|AFI63635.1| ATP-dependent chaperone ClpB [Bifidobacterium animalis subsp.
animalis ATCC 25527]
Length = 895
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/857 (53%), Positives = 606/857 (70%), Gaps = 30/857 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
K+T EA+ A + A++AG+ Q PLHL +LL +G+ I G A+
Sbjct: 4 KYTTLAQEALGDAVQSASAAGNPQVEPLHLLDSLLRQENGVIGGLIEAVGANRQTIGAQ- 62
Query: 65 VFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE--DS 121
A+ LPS + + + AS L + A K GD +++ + L+LG+L+ +
Sbjct: 63 -VRNALVSLPSASGSSTAQASASRQLTTALADASKEMKDMGDEYISTEHLLLGILDAAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ + ++ G+ +V++ + +RG G KV S + +++AL+ + DL +A GKLD
Sbjct: 122 EAAKILEQNGITADKVRAAIPNVRG--GAKVTSPDAEASYKALEKFSTDLTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLA+RIV GDVPS L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAERIVAGDVPSTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK VL E+++++G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 240 SLDLGSMVAGSKYRGEFEERLKGVLDEIKQSDGQIITFIDEIHTIVGAGAAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 300 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTIGDDALVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ EKE +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDPASKDRLAKLQSELADAREKLAGLNARWNAEKEGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS-------DENLMLTETV 532
+E +A R DLA+A+ + YG I ++ + + E ++ M+ + V
Sbjct: 480 LDEKRVEADKATREGDLAKASRILYGEIPAIQKQLTEAEHEAEKEADFAHEDEPMVPDHV 539
Query: 533 GPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGL 581
D +A +VS WTGIPV RL G+NEK +R+IG EAV AV+++V RSRAGL
Sbjct: 540 DADSVAGIVSEWTGIPVGRLMQGENEKLLNMEEYLNKRVIGQPEAVRAVSDAVRRSRAGL 599
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +PTGSFLF+GPTGVGKTELAKALAE LFDDE ++RIDMSEYME+ SVSRLIGA P
Sbjct: 600 SDPNRPTGSFLFMGPTGVGKTELAKALAEFLFDDEKAMIRIDMSEYMEKSSVSRLIGAAP 659
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRRRPYSVVLFDEVEKA+ VF+ LLQVLDDGRLTDGQGRTVDF+N
Sbjct: 660 GYVGYDEGGQLTEAVRRRPYSVVLFDEVEKANSEVFDILLQVLDDGRLTDGQGRTVDFKN 719
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T++IMTSNLG++ L++ + + Q +D V+ V FRPE LNRLD++V+F PL+ ++
Sbjct: 720 TILIMTSNLGSQFLVNPDLDE---QQKKDAVMNAVHSQFRPEFLNRLDDMVIFHPLTRQE 776
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L K+ LQ+K VA RL +R + L VT+AA + + YDP YGARP+RR ++ +V +L+
Sbjct: 777 LGKIVDLQVKQVASRLTDRRITLDVTEAAREWLADTGYDPAYGARPLRRLVQTEVGDQLA 836
Query: 822 RMLVREEIDENSTVYID 838
RML+ EI + TV +D
Sbjct: 837 RMLLAGEIKDGDTVLVD 853
>gi|403388385|ref|ZP_10930442.1| ATPase AAA-2 domain-containing protein [Clostridium sp. JC122]
Length = 867
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/862 (50%), Positives = 598/862 (69%), Gaps = 29/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQ-----AINNAGG 55
MN DK T + +++ A+ A H Q +HL AL++ G+ ++N +
Sbjct: 1 MNVDKMTVRVQQSLNDAYSEAVKYNHQQVDVIHLFSALVNQEDGLIPNIFEKMSVNISVL 60
Query: 56 ENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
N + M K+ + + A+ + +V+ +A D++++V+ +++
Sbjct: 61 RNDLHTEL----DRMPKVLGEGAQNSGVVATRRINEVLVKADEIATEFKDSYISVEHVMI 116
Query: 116 GLLE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLV 172
++E +G + + + +RG + +V++ + T+ ALK YG +L+
Sbjct: 117 AIMEVDKKGAVGKILDRFNINKNEFLKVLSDVRGNQ--RVDTQDPEGTYDALKKYGTNLI 174
Query: 173 EQAGK--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP 230
E A K LDPVIGRDEEIRR +RILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP
Sbjct: 175 ELAKKHKLDPVIGRDEEIRRTIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVP 234
Query: 231 SNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT 290
L D + +LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EG++ILFIDEIH ++GAG+T
Sbjct: 235 EGLKDRIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQSSEGRIILFIDEIHTIVGAGKT 294
Query: 291 EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSI 350
+G+MDA NL KP+LARG+L CIGATT +EYR+Y+EKD A ERRFQ V + EP+V DTVSI
Sbjct: 295 DGAMDAGNLIKPLLARGELHCIGATTFDEYRQYIEKDKALERRFQTVIIEEPTVEDTVSI 354
Query: 351 LRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQP 410
LRGLKE++E HHG+RI D A+V AA+LS RYI R+LPDKAIDL+DEA A +R ++DS P
Sbjct: 355 LRGLKERFEIHHGIRIHDSAIVAAAKLSDRYIQDRYLPDKAIDLIDEAGAMIRSEIDSLP 414
Query: 411 EEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
E+D + RK++ LE E AL KE D+AS+ RL + KEL +L++K + +Y+KEK I
Sbjct: 415 TELDIIRRKKLMLETEREALTKENDEASQKRLKNLEKELAELKEKNDEMTAKYEKEKGHI 474
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI--GQLEGNQSDENLML 528
EIR LK + + + L++AER YDL A L+YG I E+E + + E ++ E +L
Sbjct: 475 LEIRNLKSQLDNVRGDLEKAEREYDLNTVAQLKYGTIPELERQVKDKEEEMKKNYEGALL 534
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRS 577
E V +I+E+VS+WTGIPVTRL + E+++L +G EA NAV+ +VLR+
Sbjct: 535 KEEVTESEISEIVSKWTGIPVTRLVEGERQKLLRLEEELQKRVVGQEEATNAVSNAVLRA 594
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGL P +P GSF+FLGPTGVGKTELAK LA LFD E +VRIDMSEYME++SVSRLI
Sbjct: 595 RAGLKDPNRPIGSFIFLGPTGVGKTELAKTLARNLFDSEENIVRIDMSEYMEKYSVSRLI 654
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
G PPGYVG+EEGGQLTEAVRR PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TV
Sbjct: 655 GPPPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHEDVFNIFLQILDDGRLTDNKGKTV 714
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+NT+IIMTSNLG+ +LL + AR+ V+ E++ F+PE LNRLD+I++F PL
Sbjct: 715 DFKNTIIIMTSNLGSSYLLENQDESGISEDARNAVMNEMKLRFKPEFLNRLDDIIMFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
S E ++K+ + +KDV IRL++R + L VTD A DI+ E YDP+YGARP++R++ +
Sbjct: 775 SGEGIKKIIDIFLKDVRIRLSDRNITLQVTDYAKDILAKEGYDPVYGARPLKRYIGNVLE 834
Query: 818 TELSRMLVREEIDENSTVYIDA 839
T+++RM++ EI + V +D
Sbjct: 835 TKIARMIISGEIYDGCIVLVDG 856
>gi|423472842|ref|ZP_17449585.1| chaperone ClpB [Bacillus cereus BAG6O-2]
gi|402427173|gb|EJV59284.1| chaperone ClpB [Bacillus cereus BAG6O-2]
Length = 866
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/874 (51%), Positives = 624/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MELNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGNINQLFTKIHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|386812609|ref|ZP_10099834.1| chaperone ClpB [planctomycete KSU-1]
gi|386404879|dbj|GAB62715.1| chaperone ClpB [planctomycete KSU-1]
Length = 869
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/862 (51%), Positives = 598/862 (69%), Gaps = 29/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DKFT K EA+ A ELA S Q +HL LL+ GI A + G
Sbjct: 1 MRFDKFTIKAQEAVQEAQELAESKRQQQILAIHLLEVLLTQDQGIVAPLLKKLGTNTNVI 60
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ + +A+ KLP S + AP + S L A D +L+ + L+L L
Sbjct: 61 LDKTI--EAVNKLPQVSGSGAPGQAYVSAELRDTFNLAWEEASKLKDEYLSTEHLLLSLA 118
Query: 119 --EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
++ G + EAGV + + ++++RG G+++ + + +QAL+ Y +DLVE A
Sbjct: 119 GQRNTTAGKILNEAGVQKEAIYTALKEIRG--GQRITDQNPEEKYQALERYSKDLVELAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD+EIRRV+++LSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP L
Sbjct: 177 KGKLDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNGDVPEGLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ R+++LDMGAL+AG KYRGEFE+RLKAV+KEV E EG++ILFIDE+H V+GAG EGS+
Sbjct: 237 NKRVMSLDMGALIAGTKYRGEFEDRLKAVIKEVTEKEGQIILFIDELHTVVGAGAAEGSV 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA+NL KP LARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVY+ EPSV DT++ILRGL
Sbjct: 297 DASNLLKPALARGELRCIGATTLDEYRKYIEKDAALERRFQQVYIGEPSVEDTIAILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGVRI+D A+V AA LS RYI R LPDKAIDL+DEA + +R+++DS P E+D
Sbjct: 357 KERYEVHHGVRIKDSAIVAAATLSHRYIADRFLPDKAIDLIDEAASKLRIEIDSMPIELD 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ERK MQLEIE AL+KE D ASK R+ ++ K+L DLR++ L +++ EK+ I EI+
Sbjct: 417 EIERKIMQLEIEKEALKKETDPASKQRMEKIEKQLSDLREESNVLRTQWENEKKIIKEIQ 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQ-----SDENLMLT 529
L + +++ Q A+R +L + A++RYG I+E E + Q NQ L+L
Sbjct: 477 ELNARIDQVRIEEQSAQREGNLGKVAEIRYGIIRECEQKLKQ--KNQELQELQKNKLLLK 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSR 578
E V D IA VVS+WTGIPVTR+ + EKE+L +G EA+ AV+ + R+R
Sbjct: 535 EEVDADDIAVVVSKWTGIPVTRMMEGEKEKLLKMEDRLMERVVGQEEAIRAVSNCIRRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P G FLFLGPTGVGKTEL KALA LFD+EN +VRIDMSE+ME HSV+RLIG
Sbjct: 595 AGLQDPNRPMGVFLFLGPTGVGKTELCKALAAFLFDNENAMVRIDMSEFMESHSVARLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGG+LTEA+RRRPYSV+LFDE+EKAH VFN LLQV DDGRLTDG GRTVD
Sbjct: 655 APPGYVGYEEGGRLTEAIRRRPYSVILFDEIEKAHRDVFNILLQVFDDGRLTDGHGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F+NT+I+MTSN+ A + + G + R ++ Q +++ FRPE LNR+DEI++F LS
Sbjct: 715 FKNTIIVMTSNI-ASQWIQDLTGPENEEELRSRIKQALKEVFRPEFLNRIDEIIIFHGLS 773
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
+ ++++A +Q+K++ RL + + L +TD + ++ E YDP +GARP++R +++ +
Sbjct: 774 IDLIKQIANIQLKELQKRLNKYNLQLTITDGVKEKLVQEGYDPHFGARPLKRTIQQMIEN 833
Query: 819 ELSRMLVREEIDENSTVYIDAS 840
LS ++ ++ E S + +D +
Sbjct: 834 PLSIEILEGKLTEGSEIKVDMN 855
>gi|229132067|ref|ZP_04260930.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST196]
gi|228651467|gb|EEL07439.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST196]
Length = 866
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/874 (51%), Positives = 626/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++++ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLQDDYISIEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTKFYITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV RV+
Sbjct: 835 TKLARELIAGAITDNSHVVVDV--ENNELVVRVK 866
>gi|302870468|ref|YP_003839105.1| ATP-dependent chaperone ClpB [Micromonospora aurantiaca ATCC 27029]
gi|302573327|gb|ADL49529.1| ATP-dependent chaperone ClpB [Micromonospora aurantiaca ATCC 27029]
Length = 879
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/862 (52%), Positives = 616/862 (71%), Gaps = 28/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P++ T K+ EA+ A A GH + HL +ALL P G+ + + AG + Q
Sbjct: 1 MDPNRLTQKSQEALHDAQTKALRFGHVEVDGEHLLLALLDQPDGLAPRLLAQAGA-DPDQ 59
Query: 61 SAERVFNQAMKKLPSQTPA--PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
V + ++ P P ++ + L +++ A K D +++V+ L+L L+
Sbjct: 60 LRNSVEGELGRRPRVSGPGAQPGQVFVTQRLSRLLDAADREAKRLKDEYVSVEHLLLALV 119
Query: 119 ED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE-- 173
E+ S G K+ G+ R+ + +RG + +V SA+ + ++AL YGRDLV
Sbjct: 120 EEGSSSAAGRALKDQGLTRDRLLGALTGIRGNQ--RVTSANPEVAYEALDKYGRDLVADA 177
Query: 174 QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
+AGKLDPVIGRD+EIRRVV+ILSR+TKNNPVLIG+PGVGKTA+VEGLAQR+ GDVP L
Sbjct: 178 RAGKLDPVIGRDDEIRRVVQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRVANGDVPEGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGR-TEG 292
D + +LDMG+LVAGAKYRGEFEERLKAVL EV+ AEG+++LF+DE+H V+GAG +EG
Sbjct: 238 RDKTVFSLDMGSLVAGAKYRGEFEERLKAVLSEVKAAEGRILLFVDELHTVVGAGGGSEG 297
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L IGATTL+EYRK++EKDAA ERRFQ V V EPSV D +SILR
Sbjct: 298 AMDAGNMLKPMLARGELHMIGATTLDEYRKHIEKDAALERRFQPVVVDEPSVEDAISILR 357
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E+ E HGVRIQD ALV A LS RYI+ R LPDKAIDLVDEACA +R ++DSQP E
Sbjct: 358 GLRERLEVFHGVRIQDSALVSAVTLSHRYISDRFLPDKAIDLVDEACAMLRTEIDSQPAE 417
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D R+ M+LEIE AL KE D ASKARL ++RKEL DLR ++ + +++ E++ I
Sbjct: 418 LDAASRRLMRLEIEEAALAKEDDPASKARLDQLRKELADLRGEVDAMRAQWQAERQAIRR 477
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
++ L+++ E++ + AER YDL AA+LR+G + E+E + E + E +L
Sbjct: 478 VQELREEIEQVRVEAEAAERNYDLNTAAELRHGKLPELERRLQAEEERLAAKQGERRLLR 537
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSR 578
E V D+IA +V+RWTGIPV+RL + E+ ER++G EAV VA++V+R+R
Sbjct: 538 EVVTDDEIAGIVARWTGIPVSRLVEGERQKLLRLDEILHERVVGQDEAVQLVADAVIRAR 597
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
+G+ P++P GSFLFLGPTGVGKTELAK LA LFD E+ +VR+DMSEY E+H+VSRL+G
Sbjct: 598 SGVKDPRRPIGSFLFLGPTGVGKTELAKTLAAALFDTEDNMVRLDMSEYQERHTVSRLVG 657
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFNTLLQ+LDDGRLTD QGRTVD
Sbjct: 658 APPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQLLDDGRLTDAQGRTVD 717
Query: 699 FRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
FRNTV++MTSN+G++HLL+G+ G++ AR V+ E+R HFRPE LNR+D+IV+F P
Sbjct: 718 FRNTVVVMTSNIGSQHLLAGVTPDGEIKDD-ARTAVMTELRAHFRPEFLNRVDDIVLFKP 776
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L+ ++ +V L ++D+ RLA+R + L +T+AA V AE +DP+YGARP+RR+L+++V
Sbjct: 777 LTLPEIERVVDLLVQDLRNRLADRQLTLELTEAARRHVAAEGFDPVYGARPLRRYLQREV 836
Query: 817 VTELSRMLVREEIDENSTVYID 838
T + R L+ ++ + STV +D
Sbjct: 837 ETRIGRALLSGDVTDGSTVVVD 858
>gi|197103195|ref|YP_002128573.1| ATPase with chaperone activity, ATP-binding subunit
[Phenylobacterium zucineum HLK1]
gi|196480471|gb|ACG79998.1| ATPase with chaperone activity, ATP-binding subunit
[Phenylobacterium zucineum HLK1]
Length = 868
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/855 (53%), Positives = 601/855 (70%), Gaps = 26/855 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + + A +A H + P H+ ALL DP G+ A I +AGG +
Sbjct: 1 MNLEKFTDRAKGMLQAAQTVAVRLNHQRIAPEHILKALLEDPEGMAAGLIRSAGG--TPE 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPAS--TTLIKVIRRA-QAAQKAHGDTHLAVDQLILG- 116
A R + A+ K+P+ T A P I+++ +A Q AQKA GDT + V++L+L
Sbjct: 59 LAGREVDSALAKIPAVTGAGASQPPGLDNDAIRLLDQAEQVAQKA-GDTFVTVERLLLAM 117
Query: 117 -LLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE-- 173
L S G AGV + ++ LRG GR ++AS + ++ALK Y RDL E
Sbjct: 118 ALSASSTAGRALASAGVKPEALSKAIDALRG--GRLADTASAEDRYEALKKYARDLTEAA 175
Query: 174 QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
+AGKLDPVIGRDEEIRR V+IL+RRTKNNPVLIG+PGVGKTA+VEGLA RI GDVP L
Sbjct: 176 RAGKLDPVIGRDEEIRRTVQILARRTKNNPVLIGDPGVGKTAIVEGLAIRIANGDVPDTL 235
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +L+ALDMGAL+AGAKYRGEFEERLK VL EV+ AEG ++LFIDE+H ++GAG+ EG+
Sbjct: 236 RDRKLMALDMGALIAGAKYRGEFEERLKGVLDEVKSAEGHIVLFIDEMHTLIGAGKAEGA 295
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KP LARG+L CIGATTL+EYRK+VEKDAA +RRFQ V+V EP+V DT+SILRG
Sbjct: 296 MDAGNLLKPALARGELHCIGATTLDEYRKHVEKDAALQRRFQPVFVDEPTVEDTISILRG 355
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKEKYE HHGVRI D A+V AA LS RYI+ R LPDKAIDL+DEA + +R++++S+PEEI
Sbjct: 356 LKEKYELHHGVRITDAAIVAAATLSHRYISDRFLPDKAIDLMDEAASRLRMEVESKPEEI 415
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
+ L+R+ +QL+IE AL+KE D ASK RL ++ KEL DL + L R++ EKE+I
Sbjct: 416 EALDRRIIQLKIEREALKKETDAASKDRLSKLEKELADLEQESAALTQRWQAEKEKIQAE 475
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVG 533
RLK++ ++ L++A+RR DL RA +L YG I ++E + + + + ML E V
Sbjct: 476 ARLKEQLDQARLELEQAQRRSDLTRAGELSYGVIPQLEKQLA--DAQAASQGAMLREEVT 533
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
IA VVSRWTGIPV ++ + E+E+L IG A A++AV+ +V R+RAGL
Sbjct: 534 AQDIAGVVSRWTGIPVDKMLEGEREKLIHMEEALGRRVIGQAHAISAVSRAVRRARAGLK 593
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTEL KALA LFDD+ +VRIDMSE+ME+HSV+RLIGAPPG
Sbjct: 594 DPNRPLGSFLFLGPTGVGKTELTKALAGFLFDDDTAMVRIDMSEFMEKHSVARLIGAPPG 653
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQG TVDF NT
Sbjct: 654 YVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHNDVFNVLLQVLDDGRLTDGQGHTVDFSNT 713
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+II+TSNLG++ L S G+ ++ QV++ VR HFRPE LNRLDEI++F L E +
Sbjct: 714 LIILTSNLGSQFLSSLAEGE-NVESVEPQVMEVVRAHFRPEFLNRLDEIILFHRLGLEHM 772
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ + LA+R + L +++ A + YDP+YGARP++R +++ + L+
Sbjct: 773 GPIVDIQVARLQQLLADRKITLELSEEARAWLGRVGYDPVYGARPLKRTVQRHLQDPLAD 832
Query: 823 MLVREEIDENSTVYI 837
M+++ E+ + +TV I
Sbjct: 833 MILQGEVGDGATVRI 847
>gi|138894350|ref|YP_001124803.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Geobacillus
thermodenitrificans NG80-2]
gi|134265863|gb|ABO66058.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Geobacillus
thermodenitrificans NG80-2]
Length = 861
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/854 (52%), Positives = 607/854 (71%), Gaps = 21/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ + T K EA+ A LA H Q HL ALL G+ + + +G +
Sbjct: 1 MDASRLTEKLQEALMAAQSLAKERHHQQLDVEHLLSALLEQEGGLAPRLLELSGADRNKV 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
N+ ++ P ++ + L +++ A+A K D +++V+ ++L L
Sbjct: 61 VG--FLNEQLRHKPEVHGTEGQLYIAPALARLLDEAEAEAKRMQDEYVSVEHVLLALPSG 118
Query: 121 SQ-IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AGK 177
++ I G+ + + + K+RG + +V S + T++AL YGRDLV + AGK
Sbjct: 119 AEHIARRLASFGLTREALLTALTKVRGNQ--RVTSPHPEATYEALTKYGRDLVAEVKAGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L D
Sbjct: 177 IDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLKDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+ ALDM ALVAGAK+RGEFEERLKAVL E+++++G++ILFIDE+H ++GAG+ EG++DA
Sbjct: 237 IFALDMSALVAGAKFRGEFEERLKAVLNEIKKSDGRIILFIDELHTIVGAGKAEGAIDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPMLARG+LRCIGATTL+EYR+Y+EKD A ERRFQQV V EPSV DT+SILRGLKE+
Sbjct: 297 NMLKPMLARGELRCIGATTLDEYRQYIEKDPALERRFQQVLVEEPSVEDTISILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGV+I DRALV AA LS RYI+ R LPDKAIDLVDEACA +R +++S P E+D +
Sbjct: 357 YEVHHGVKIHDRALVAAAVLSDRYISDRFLPDKAIDLVDEACATIRTEMESMPSELDEVM 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ MQLEIE AL KE D+AS+ RL ++ EL +LR++ + ++++EKE +D +RR++
Sbjct: 417 RRVMQLEIEEAALSKETDEASRTRLEALQNELANLRERANAMKAKWQQEKETLDRVRRVR 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS--DENLMLTETVGPD 535
++ E L+EAE YDL +AA+LR+G I ++E + QLE S E +L E V +
Sbjct: 477 EELERAKRELEEAENDYDLNKAAELRHGRIPQLEKQLKQLEQEASGQGEGKLLREEVTEE 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKER-----------LIGLAEAVNAVAESVLRSRAGLGRP 584
+IAE+VSRWTGIP+TRL + E+E+ +IG EAV VA++VLR+RAG+ P
Sbjct: 537 EIAEIVSRWTGIPLTRLVEGEREKLLRLHELLHERVIGQDEAVELVADAVLRARAGIKDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAK LAE LFD E L+R+DMSEYME+H+VSRLIGAPPGYV
Sbjct: 597 NRPIGSFLFLGPTGVGKTELAKTLAEALFDSEEQLIRLDMSEYMEKHAVSRLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGRLTD QGRTVDF+NTV+
Sbjct: 657 GYEEGGQLTEAVRRKPYSVLLLDEIEKAHPDVFNLLLQLLDDGRLTDSQGRTVDFKNTVV 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSN+G+ LL G++ + R QVL ++R HFRPE LNR+D++V+F PLS +++
Sbjct: 717 IMTSNIGSPLLLESRNGEIEEET-RKQVLDQLRAHFRPEFLNRIDDVVLFKPLSTNEVKG 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ ++++ RLA+R + L +T+ A + +DP+YGARP++R+++K++ T L++ L
Sbjct: 776 IVAKFARELSRRLADRHIELVLTEEAKQHIAEAGFDPVYGARPLKRFMQKQIETPLAKEL 835
Query: 825 VREEIDENSTVYID 838
+ + + STV +D
Sbjct: 836 IAGRVKDYSTVTVD 849
>gi|304319819|ref|YP_003853462.1| endopeptidase Clp: ATP-binding subunit B, clpB [Parvularcula
bermudensis HTCC2503]
gi|303298722|gb|ADM08321.1| endopeptidase Clp: ATP-binding subunit B, clpB [Parvularcula
bermudensis HTCC2503]
Length = 887
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/859 (51%), Positives = 600/859 (69%), Gaps = 21/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK+T + + A +A H Q TP H+ ALL D G+ A + AGG+
Sbjct: 1 MNFDKYTDRAKGLVQAAQTIAIRENHQQITPFHVLKALLDDSEGLAANLMRRAGGD--PD 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
A +QA+ KLP+ A ++ + ++ +A+ K GD+++ ++L++ L +
Sbjct: 59 LALTAVDQALAKLPTVQGANAQVYMAQPTARIFTQAEDIAKKAGDSYVTAERLLVALALE 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ K+AG++ + + + ++R +GR ++A+ + + ALK Y RDL + A GKL
Sbjct: 119 GETAATLKKAGLSPQSLNTAINEIR--KGRTADNANAEQGYDALKRYARDLTDAAREGKL 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DP+IGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D RL
Sbjct: 177 DPIIGRDEEIRRAMQILSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKRL 236
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
+ALD+G+L+AGAKYRGEFEERLKAVL E AEG++ILFIDE+H ++GAG+T+G+MDA+N
Sbjct: 237 LALDLGSLIAGAKYRGEFEERLKAVLSETTSAEGQIILFIDEMHTLVGAGKTDGAMDASN 296
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KP LARG+L CIGATTL+EYRKYVEKDAA RRFQ V+V+EP+V DT+SILRGLKEKY
Sbjct: 297 LLKPALARGELHCIGATTLDEYRKYVEKDAALARRFQAVFVSEPTVADTISILRGLKEKY 356
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D A+V AA LS RYIT R LPDKAIDLVDEA + +R+ +DS+PEE+D L+R
Sbjct: 357 ELHHGVRIADSAIVSAATLSNRYITDRFLPDKAIDLVDEAASRLRMAVDSKPEELDALDR 416
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+ +Q++IE AL KE D ASK RL ++ K L L ++ L ++ EKE + +K+
Sbjct: 417 QIIQMKIEREALLKEDDTASKDRLTDLEKGLAALEERSAELTAAWQAEKEALASTTSVKE 476
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL---MLTETVGPD 535
+ + L +AERR DLA+A++L+YG I +E + + EG Q + + ++ E V +
Sbjct: 477 ELDRARQDLVDAERRGDLAKASELKYGQIPALERRLEEAEGRQDADGVNSGLVQEVVDSE 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVS+WTGIPV ++ + E+++L IG EAV AV+ +V R+RAGL P
Sbjct: 537 TIAQVVSKWTGIPVDKMLEGERDKLLRMEEVLHSRVIGQEEAVTAVSAAVRRARAGLQDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTEL KALA LFDD+ + RIDMSE+ME+H+VSRLIGAPPGYV
Sbjct: 597 NRPLGSFLFLGPTGVGKTELTKALAAFLFDDDQAIARIDMSEFMEKHAVSRLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGR VDF+NT+I
Sbjct: 657 GYEEGGVLTEAVRRRPYQVILFDEVEKAHPDVFNILLQVLDDGRLTDGQGRVVDFKNTII 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSNLGAE+ ++G+ T++ R+QV+ VR FRPE LNRLDEI++F L +Q+
Sbjct: 717 ILTSNLGAEY-MTGLAEGQTVETVREQVMAAVRSAFRPEFLNRLDEIILFSRLERDQMGG 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+ + L +R + + + DAA + YDP +GARP++R ++K V L+ L
Sbjct: 776 IVDIQIARLQSLLDDRKIVIEIDDAARQWLAQSGYDPAFGARPLKRVIQKAVQDPLAERL 835
Query: 825 VREEIDENSTVYIDASPKG 843
+ I + +T+++ A G
Sbjct: 836 LAGRISDGATLHLSADDTG 854
>gi|220933996|ref|YP_002512895.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995306|gb|ACL71908.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 859
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/863 (52%), Positives = 597/863 (69%), Gaps = 23/863 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE-NAA 59
M DK T K A+ AH LA H P HL +ALL G + AG N
Sbjct: 1 MRMDKLTSKFQMALQDAHSLALGRDHQMIEPAHLMIALLDQEGGTVRHVLTQAGANVNLL 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+S +A+++LPS A E+ S L +++ + D ++ + +L LE
Sbjct: 61 RSQ---LGEALERLPSVQGAEGEVHLSNDLGRLLNVCDKLAQKRKDQFISSELFLLAALE 117
Query: 120 D-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
D +G+L K+AG V+ VE +RG G++V+ + + QAL+ Y DL E+A G
Sbjct: 118 DKGTLGELLKKAGADRQAVEKAVEAMRG--GQRVDDPNAEEQRQALEKYTIDLTERAEQG 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRIV G+VP L +
Sbjct: 176 KLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNR 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL++LDMGAL+AGAK+RGEFEERLKAVL ++ + EG++ILFIDEIH ++GAG+ EG+MDA
Sbjct: 236 RLLSLDMGALIAGAKFRGEFEERLKAVLNDLSKQEGRIILFIDEIHTMVGAGKAEGAMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KP LARG+L CIGATTL+EYRKY+EKDAA ERRFQ+V V EPSV DT++ILRGLKE
Sbjct: 296 GNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKE 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGV I D A+V AA LS RYIT R LPDKAIDL+DEA + +R+++DS+PEE+D L
Sbjct: 356 RYEVHHGVEITDPAIVAAAMLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEEMDRL 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER+ +QL+IE AL+KE D+AS+ RL + E+D L + L +K EK + +
Sbjct: 416 ERRLIQLKIEREALKKESDEASRKRLDTLEGEIDKLEREFADLDEIWKAEKAALSGTAHI 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ E L+ A R DLAR ++L+YG I E+E + + E +L V ++
Sbjct: 476 KEELERARLELETARRAGDLARMSELQYGRIPELEKQLDMAAQAEMHEMRLLRNKVSDEE 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IAEVVSRWTGIPV+++ + E+E+L +G +EAV AV+ ++ RSRAGL P+
Sbjct: 536 IAEVVSRWTGIPVSKMLEGEREKLLRMEEALTTRVVGQSEAVKAVSNAIRRSRAGLSDPR 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSFLFLGPTGVGKTEL KALA LFD E +VRIDMSE+ME+HSV+RLIGAPPGYVG
Sbjct: 596 RPNGSFLFLGPTGVGKTELTKALAAFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRR+PYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVI+
Sbjct: 656 YEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIV 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLG++ ++ M G+ + + V++ V HFRPE +NR+DE+VVF PL EQ+R +
Sbjct: 716 MTSNLGSQ-IIQEMAGEEHYEAMKAAVMEVVGSHFRPEFINRVDEVVVFHPLGREQIRSI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+ D+ R+AER + L V++AALD + +DP+YGARP++R ++ +V L++ ++
Sbjct: 775 TSIQLDDLRKRMAERDLKLEVSEAALDRLGEAGFDPVYGARPLKRAIQHQVENPLAQAIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVY 848
TV +D + GD L +
Sbjct: 835 SGRFLPGDTVRVDVA--GDGLTF 855
>gi|229166111|ref|ZP_04293872.1| Chaperone protein clpB 1 [Bacillus cereus AH621]
gi|423594796|ref|ZP_17570827.1| chaperone ClpB [Bacillus cereus VD048]
gi|228617333|gb|EEK74397.1| Chaperone protein clpB 1 [Bacillus cereus AH621]
gi|401223748|gb|EJR30316.1| chaperone ClpB [Bacillus cereus VD048]
Length = 866
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/874 (51%), Positives = 625/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTKFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV RV+
Sbjct: 835 TKLARELIAGAITDNSHVVVDV--ENNELVVRVK 866
>gi|342216055|ref|ZP_08708702.1| ATP-dependent chaperone protein ClpB [Peptoniphilus sp. oral taxon
375 str. F0436]
gi|341586945|gb|EGS30345.1| ATP-dependent chaperone protein ClpB [Peptoniphilus sp. oral taxon
375 str. F0436]
Length = 856
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/855 (50%), Positives = 615/855 (71%), Gaps = 29/855 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN ++FT K+ + + A LA + G+++ PLHL LL DP G+ + +
Sbjct: 1 MNFERFTQKSLQGVQGAQTLAQNYGNSELKPLHLHKVLLEDPEGLIPKILTYMN-----I 55
Query: 61 SAERVFN---QAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
SA+ V A+ +LP Q + S KV++ A+ K D +++V+ L L L
Sbjct: 56 SADAVLTDLISALDRLPKQKGGS--VYPSADFQKVLQDAEKIAKDFKDDYVSVEHLYLAL 113
Query: 118 LEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ D+ +FK+ G+ ++K+RG + V + + + T++AL+ YGRD+ E A
Sbjct: 114 M-DADDKSIFKKYGIDKDGFLKALKKIRGNQ--HVTTDNPEATYEALQKYGRDVTEDARQ 170
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
G++DPVIGRD+EIR V+RILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ DVP L D
Sbjct: 171 GRMDPVIGRDDEIRNVIRILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINKDVPDGLKD 230
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ +LDMGAL+AGAKYRGEFEERLKAVL EV++++G+++LFIDEIH ++GAG++EG+MD
Sbjct: 231 KTIYSLDMGALIAGAKYRGEFEERLKAVLNEVKDSQGQILLFIDEIHTIVGAGKSEGAMD 290
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KP+LARG+L IGATTL+EYRKY+E D A ERRFQ+V VAEPSV DT+SILRGLK
Sbjct: 291 AGNLLKPLLARGELHMIGATTLDEYRKYIESDQALERRFQKVLVAEPSVEDTISILRGLK 350
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE +HG+RI D A++ A+ LS RYIT R LPDKAIDL+DEACA +R +++S P E+D
Sbjct: 351 EKYEIYHGIRISDGAVIAASTLSDRYITDRFLPDKAIDLMDEACAMLRTEIESMPTEVDE 410
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ RK +QLEIE AL+KE D SK RL + EL + + K L +++ EK+ ++ +
Sbjct: 411 VRRKILQLEIEAQALKKESDDGSKRRLEGLENELAEEKAKYDSLKAQWENEKKALEGQKT 470
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
+K++ + + +++AERRYDL + L+YG + +++ + GN+ +N M+ E V +
Sbjct: 471 IKERIDRVKHQIEDAERRYDLEELSQLKYGELPKLQEELKASMGNERPKNSMVKEEVTEE 530
Query: 536 QIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA+VVS+WTGIPV +L Q E K+R+ G EA++AV+++VLR+RAGL
Sbjct: 531 EIAQVVSKWTGIPVAKLAQTERDKLLQMDSLLKKRVFGQDEAIDAVSDAVLRARAGLKAQ 590
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTE AKAL E LFDDE ++RIDMSEYME+HSVSRL+G+PPGYV
Sbjct: 591 NRPIGSFIFLGPTGVGKTETAKALTELLFDDERNMIRIDMSEYMEKHSVSRLVGSPPGYV 650
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR PYSV+LFDE+EKAH VFN LLQVLDDGRLTD QGRTVDF+NTVI
Sbjct: 651 GYDEGGQLTEAVRRAPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDNQGRTVDFKNTVI 710
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+ L+ + G++T + A+++V ++R F+PE LNR+D+IV+F PL +++
Sbjct: 711 IMTSNIGSLDLIESIEDHGEITPE-AQERVQGQLRAAFKPEFLNRIDDIVLFKPLGKDEM 769
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
K+ RLQ++ +A +L +R + L++ + A+D ++ +S+D YGARP++R++++ + T+LSR
Sbjct: 770 DKIVRLQVQVIADQLKDRNIHLSIDEDAVDYIVDQSFDIQYGARPVKRYIQRTLETKLSR 829
Query: 823 MLVREEIDENSTVYI 837
++++ ++ +N + +
Sbjct: 830 LIIQGDVQDNDNLKV 844
>gi|91206187|ref|YP_538542.1| chaperone ClpB [Rickettsia bellii RML369-C]
gi|157827795|ref|YP_001496859.1| chaperone ClpB [Rickettsia bellii OSU 85-389]
gi|122990886|sp|Q1RGR1.1|CLPB_RICBR RecName: Full=Chaperone protein ClpB
gi|91069731|gb|ABE05453.1| ClpB [Rickettsia bellii RML369-C]
gi|157803099|gb|ABV79822.1| ClpB [Rickettsia bellii OSU 85-389]
Length = 858
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/854 (50%), Positives = 606/854 (70%), Gaps = 22/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DKFT AI +A H Q PLHL +L ++ +GI INN+GG N
Sbjct: 1 MNIDKFTAHAKSAITNCQHIAAKNDHQQILPLHLLASLFNEDTGIIRTLINNSGG-NLNI 59
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
A++V + K+P Q I +S L+KV++RA K +GD+ + +++++ L
Sbjct: 60 LADQV-QVELNKIPKVQVDGGGTIYSSAELLKVLQRADDLAKNNGDSFVTIERILEALSF 118
Query: 120 DSQI-GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
D+ I G + G++ ++ + + +LR +G+K ++ S + ++ ALK YGRD+ E ++G
Sbjct: 119 DNTIAGKILTNNGISSKKLAASILQLR--KGKKADTESAENSYDALKKYGRDVTELAESG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDP+IGRDEEIRR V++LSRR KNNPVLIGEPGVGKTA++EGLAQRI DVP L +
Sbjct: 177 KLDPIIGRDEEIRRTVQVLSRRMKNNPVLIGEPGVGKTAIIEGLAQRIFSKDVPETLINC 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
R+I LDMGAL+AGAKYRGEFEERLKAVL E++E+ G++ILFIDE+HL++G G+T+G+MDA
Sbjct: 237 RIIELDMGALIAGAKYRGEFEERLKAVLGEIKESSGEIILFIDELHLLVGTGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KPMLARG+L CIGATTL+EYRKY+EKDAAF RRFQ VYV+EP+V DT+SILRG+KE
Sbjct: 297 SNLLKPMLARGELHCIGATTLDEYRKYIEKDAAFARRFQPVYVSEPTVEDTISILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D A+V AA LS RYIT R LPDKAIDL+DEAC+ ++++L S+PEE+D L
Sbjct: 357 KYELHHAVRISDSAIVAAATLSNRYITDRFLPDKAIDLIDEACSRMKIELSSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +Q++IEL AL+KE D+ SK ++ + EL+ L + +++ EK +I ++L
Sbjct: 417 DRRIIQIKIELAALKKESDEHSKKKIEHLTAELEKLESNSYDMSSKWQAEKSKIQGQQKL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ + L+ AER +LA+A++L+YG I E+ I + E +D +L E V
Sbjct: 477 KEELDRARIDLERAERDANLAKASELKYGIIPEIMKKIQETE--NADSKGLLKEIVSESD 534
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA ++SR TGIP+ + +E+ERL IG EA+ +V+++V RSRAG+
Sbjct: 535 IASIISRITGIPIDTMLSSERERLLVMEQKLRESVIGQDEAIKSVSDAVRRSRAGIQDIN 594
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSFLFLGPTGVGKTEL KALA LFDD N ++RIDMSEYME+H++SRLIGAPPGYVG
Sbjct: 595 RPLGSFLFLGPTGVGKTELTKALAGFLFDDRNAILRIDMSEYMEKHAISRLIGAPPGYVG 654
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+++GG LTEAVRRRPY V+LFDEVEKAH +FN +LQ+LD+GRLTD QG TVDF+NT+I+
Sbjct: 655 YDQGGVLTEAVRRRPYQVILFDEVEKAHPDIFNIMLQILDEGRLTDSQGITVDFKNTIIV 714
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
+TSNLGAE L++ G+ T +V +DQV++ V+ F+PE LNRLDEI++F L+ + +
Sbjct: 715 LTSNLGAEILVNQKEGEDTYKV-KDQVMEYVKMVFKPEFLNRLDEIILFHRLNQSNIHDI 773
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
++Q++ + L+ + + L + AL+ + + YDP +GARP++R +++++ L++M++
Sbjct: 774 VKIQLEGLKKILSAQNIILEFDEPALNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMIL 833
Query: 826 REEIDENSTVYIDA 839
E+ V I A
Sbjct: 834 AGEVSSGKIVKITA 847
>gi|415722734|ref|ZP_11469127.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703C2mash]
gi|388064206|gb|EIK86763.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703C2mash]
Length = 864
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/867 (51%), Positives = 610/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + A +AG+AQ LHLA ALL G+ I AG + AE
Sbjct: 4 KFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEHGVVRALIAQAGADAQQIGAE- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-- 121
A+ LPS T + P AS L+ + +A+ +A GD +++ + +++G++ +
Sbjct: 63 -IRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMRAMGDEYVSTEHMLVGMVASAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 122 AVADIFKKHNVSADALRKAVPTVRG--GAKVTSPDAEGNYKALEKYSVDMTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVLKE+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 240 SLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EYR+++EKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 300 LKPMLARGELRLVGATTLNEYREHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A+K RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDAAAKERLEKLQEELANSREKLAGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E ++ E + PDQ
Sbjct: 480 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESQAANAKSEAKEPMVPDQVDA 539
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 540 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 600 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKSSVSRLIGAAPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 660 IGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PLS E+L
Sbjct: 720 LIMTSNLGSQFLVQEGLDDAA---KRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELS 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q+ VA RL++R ++L V D+A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 777 GIVDIQVCQVAARLSDRRISLDVNDSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 836
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + V D + D++ ++
Sbjct: 837 LLSGKVHDGAHVVADCAENDDHVTLKI 863
>gi|407779870|ref|ZP_11127121.1| ATP-dependent chaperone ClpB [Nitratireductor pacificus pht-3B]
gi|407298375|gb|EKF17516.1| ATP-dependent chaperone ClpB [Nitratireductor pacificus pht-3B]
Length = 873
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/870 (52%), Positives = 603/870 (69%), Gaps = 24/870 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ + I A LA S H QF P HL L+ D G+ A I AGG AQ
Sbjct: 1 MNIEKYSERVRGFIQSAQTLALSGNHQQFAPEHLLKVLVDDSEGLAASLIERAGGR--AQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
+ A+K +P ++ + L KV A+ K GD+ + V++L++ +
Sbjct: 59 DVRLAVDAALKAMPRVEGGNGQLYMAQPLAKVFSTAEDIAKKAGDSFVTVERLLMAMAIE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ DL +AGV + + +R +GR +SAS + + ALK Y RDL +AG
Sbjct: 119 KSAKTADLLAKAGVTPTALNQVINDIR--KGRTADSASAEQGYDALKKYARDLTADARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA R+V GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRLVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLK+VL EV AEG +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKSVLNEVTAAEGNIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V EPSV DTVSILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVNEPSVEDTVSILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYI R LPDKAIDLVDEA A +R+Q+DS+PE +D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYIADRFLPDKAIDLVDEAAARLRMQVDSKPEALDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ EKD+ASK RL ++ KEL L ++ L + EK+++ L
Sbjct: 417 DRRIMQLKIEREALKAEKDEASKDRLGKLEKELTGLEEESVRLTSLWAAEKDKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLMLTETVGP 534
K++ +E L A+R+ + RA +L YG I E+E + + E G++ M+ ETV P
Sbjct: 477 KRQLDEARNELAIAQRKGEFQRAGELAYGRIPELEKKLAEAEAQGDEEGPGGMVEETVTP 536
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
D +A +VSRWTGIPV ++ + E+E+L +G EAV AV+++V R+RAGL
Sbjct: 537 DHVAHIVSRWTGIPVDKMLEGEREKLLRMEDEIAKRVVGQGEAVQAVSKAVRRARAGLQD 596
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSF+FLGPTGVGKTEL KALA LFDDE LVRIDMSE+ME+HSV+RLIGAPPGY
Sbjct: 597 PNRPIGSFMFLGPTGVGKTELTKALASFLFDDEQALVRIDMSEFMEKHSVARLIGAPPGY 656
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+
Sbjct: 657 VGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTL 716
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSNLGAE+L++ + QV RD+V+ V+ FRPE LNR+DE+++F L + +
Sbjct: 717 IIMTSNLGAEYLVNLGEDQDVDQV-RDEVMGVVKASFRPEFLNRVDEVILFHRLRRQDMG 775
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +Q+K + L++R + L + A++ + + YDP YGARP++R ++K++ L+
Sbjct: 776 RIVEIQLKRLERLLSDRKITLDLDAEAIEWLAEKGYDPAYGARPLKRVMQKELQDPLAEK 835
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRVQKN 853
++ EI + STV + A D L +R ++
Sbjct: 836 ILLGEIFDGSTVKVTAG--SDRLNFRPRRT 863
>gi|196248040|ref|ZP_03146742.1| ATP-dependent chaperone ClpB [Geobacillus sp. G11MC16]
gi|196212824|gb|EDY07581.1| ATP-dependent chaperone ClpB [Geobacillus sp. G11MC16]
Length = 861
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/854 (52%), Positives = 607/854 (71%), Gaps = 21/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ + T K EA+ A LA H Q HL ALL G+ + + +G +
Sbjct: 1 MDASRLTEKLQEALMAAQSLAKERHHQQLDVEHLLSALLEQEGGLAPRLLELSGADRNKV 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
N+ ++ P ++ + L +++ A+A K D +++V+ ++L L
Sbjct: 61 VG--FLNEQLRHKPEVHGTEGQLYIAPALARLLDEAEAEAKRMQDEYVSVEHVLLALPSG 118
Query: 121 SQ-IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AGK 177
++ I G+ + + + K+RG + +V S + T++AL YGRDLV + AGK
Sbjct: 119 AEHIARRLASFGLTREALLTALTKVRGNQ--RVTSPHPEATYEALTKYGRDLVAEVKAGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L D
Sbjct: 177 IDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLKDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+ ALDM ALVAGAK+RGEFEERLKAVL E+++++G++ILFIDE+H ++GAG+ EG++DA
Sbjct: 237 IFALDMSALVAGAKFRGEFEERLKAVLNEIKKSDGRIILFIDELHTIVGAGKAEGAIDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPMLARG+LRCIGATTL+EYR+Y+EKD A ERRFQQV V EPSV DT+SILRGLKE+
Sbjct: 297 NMLKPMLARGELRCIGATTLDEYRQYIEKDPALERRFQQVLVEEPSVEDTISILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGV+I DRALV AA LS RYI+ R LPDKAIDLVDEACA +R +++S P E+D +
Sbjct: 357 YEVHHGVKIHDRALVAAAVLSDRYISDRFLPDKAIDLVDEACATIRTEMESMPSELDEVM 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ MQLEIE AL KE D+AS+ RL ++ EL +LR++ + ++++EKE +D +RR++
Sbjct: 417 RRVMQLEIEEAALSKETDEASRTRLEALQNELANLRERANAMKAKWQQEKEALDRVRRVR 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS--DENLMLTETVGPD 535
++ E L+EAE YDL +AA+LR+G I ++E + QLE S E +L E V +
Sbjct: 477 EELERAKRELEEAENDYDLNKAAELRHGRIPQLEKQLKQLEQEASGQGEGKLLREEVTEE 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKER-----------LIGLAEAVNAVAESVLRSRAGLGRP 584
+IAE+VSRWTGIP+TRL + E+E+ +IG EAV VA++VLR+RAG+ P
Sbjct: 537 EIAEIVSRWTGIPLTRLVEGEREKLLRLHELLHERVIGQDEAVELVADAVLRARAGIKDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAK LAE LFD E L+R+DMSEYME+H+VSRLIGAPPGYV
Sbjct: 597 NRPIGSFLFLGPTGVGKTELAKTLAEALFDSEEQLIRLDMSEYMEKHAVSRLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGRLTD QGRTVDF+NTV+
Sbjct: 657 GYEEGGQLTEAVRRKPYSVLLLDEIEKAHPDVFNLLLQLLDDGRLTDSQGRTVDFKNTVV 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSN+G+ LL G++ + R QVL ++R HFRPE LNR+D++V+F PLS +++
Sbjct: 717 IMTSNIGSPLLLESRNGEIEEET-RKQVLDQLRAHFRPEFLNRIDDVVLFKPLSTNEVKG 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ ++++ RLA+R + L +T+ A + +DP+YGARP++R+++K++ T L++ L
Sbjct: 776 IVAKFARELSRRLADRHIELVLTEEAKQHIAEAGFDPVYGARPLKRFMQKQIETPLAKEL 835
Query: 825 VREEIDENSTVYID 838
+ + + STV +D
Sbjct: 836 IAGRVKDYSTVTVD 849
>gi|197302413|ref|ZP_03167469.1| hypothetical protein RUMLAC_01141 [Ruminococcus lactaris ATCC
29176]
gi|197298534|gb|EDY33078.1| ATP-dependent chaperone protein ClpB [Ruminococcus lactaris ATCC
29176]
Length = 874
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/859 (50%), Positives = 610/859 (71%), Gaps = 31/859 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + +A+ ++A G+ + HL ALL+ + + + E +
Sbjct: 13 MNINKFTQNSLQAVQNCEKIAADNGNQELAQEHLLYALLTQDDSLILKLL-----EKMSI 67
Query: 61 SAERVFN---QAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
++ N QA+ K P + L V+ A+ K GD +++V+ L L +
Sbjct: 68 QSQLFVNRVEQAIGKRPKVQGGKAYV--GQDLNNVLIHAEDEAKQMGDEYISVEHLFLAM 125
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++ ++ +LF+E G++ + +RG + +V S + + T+ L YG+DLV++A
Sbjct: 126 MKYASREMKELFREFGISREGFLHALSTVRGNQ--RVTSDNPEATYDTLNKYGQDLVDRA 183
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRDEEIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP L
Sbjct: 184 REQKLDPVIGRDEEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVSGDVPEGL 243
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + +LDMGALVAGAKYRGEFEERLKAVL+EV+ ++GK+ILFIDE+H ++GAG+T+G+
Sbjct: 244 KDKTIFSLDMGALVAGAKYRGEFEERLKAVLEEVKNSDGKIILFIDELHTIVGAGKTDGA 303
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA N+ KPMLARG+L CIGATTL+EYRKY+EKDAA ERRFQ V V EP+V D +SILRG
Sbjct: 304 MDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDAALERRFQPVLVDEPTVEDAISILRG 363
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HGV+I D ALV A LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+
Sbjct: 364 LKERYEVFHGVKITDSALVAAVTLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTEL 423
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L R+ MQ+EIE AL+KE+D+ SK RL +++EL +L+++ ++++ EK+ ++ +
Sbjct: 424 DELRRRVMQMEIEESALKKEEDRLSKERLEHLQEELAELKEQYAGKKVQWENEKKSVEHV 483
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETV 532
++++++ E++ +Q+A+R YDL +AA+L+YG + +++ + + E ++L L E V
Sbjct: 484 QKIREEIEQVNKEIQKAQREYDLNKAAELQYGKLPQLQKQLEEEEERVKAKDLSLVHEAV 543
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
++I +VSRWTGIPV +L ++E+ +R++G E V V E+++RS+AG+
Sbjct: 544 TDEEIGRIVSRWTGIPVAKLNESERNKTLHLADELHKRVVGQDEGVELVTEAIIRSKAGI 603
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTELAKALA+ LFDDEN +VRIDMSEYME++SVSRLIGAPP
Sbjct: 604 KDPSKPIGSFLFLGPTGVGKTELAKALAQSLFDDENNMVRIDMSEYMEKYSVSRLIGAPP 663
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+N
Sbjct: 664 GYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKN 723
Query: 702 TVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
T++IMTSN+GA +LL G+ G + Q + + +++ HFRPE LNRLDEI++F PL+
Sbjct: 724 TILIMTSNIGANYLLEGIKEDGSIDEQCQK-MTMNDLKAHFRPEFLNRLDEIIMFKPLTK 782
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
+R + L +KDV RL E+ + + +T+AA D V+ YDP+YGARP++R+L+K V T
Sbjct: 783 TNIRSIIDLLVKDVNRRLEEKELQIELTEAAKDFVVEGGYDPMYGARPLKRYLQKNVETL 842
Query: 820 LSRMLVREEIDENSTVYID 838
+R+++ + T+ ID
Sbjct: 843 AARLILAGNVGRGDTILID 861
>gi|163939070|ref|YP_001643954.1| ATPase [Bacillus weihenstephanensis KBAB4]
gi|423515931|ref|ZP_17492412.1| chaperone ClpB [Bacillus cereus HuA2-4]
gi|163861267|gb|ABY42326.1| ATPase AAA-2 domain protein [Bacillus weihenstephanensis KBAB4]
gi|401166393|gb|EJQ73698.1| chaperone ClpB [Bacillus cereus HuA2-4]
Length = 866
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/874 (51%), Positives = 626/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++++ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLQDDYISIEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFAKFYITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV RV+
Sbjct: 835 TKLARELIAGAITDNSHVVVDV--ENNELVVRVK 866
>gi|312135307|ref|YP_004002645.1| ATP-dependent chaperone clpb [Caldicellulosiruptor owensensis OL]
gi|311775358|gb|ADQ04845.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor owensensis OL]
Length = 864
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/861 (50%), Positives = 615/861 (71%), Gaps = 30/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN ++FT A+ A A H + HL AL+++ + A+ + N G + +
Sbjct: 1 MNMERFTQSLQTALLDAQNTAIVYKHQEIGAEHLHYALVNEDEKLVAKILKNMGID--IE 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+R + +KK+P P + S + +++ +A+ K D +++V+ + L +++
Sbjct: 59 LYKRDIEEQLKKIPMVYGPGASTVYVSRYVNEILVKAEEEAKKFKDEYISVEHVYLAMID 118
Query: 120 DS--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ +F++ G+ + ++ K+RG +++ + + + ++ LK YGRDL + A
Sbjct: 119 SDIPSVKSIFRKYGITREKFLQQLYKIRG--NQRITNPNPEEVYEVLKKYGRDLTDLARK 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L +
Sbjct: 177 GKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKN 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ ALD+GAL+AGAKYRGEFEERLKAVL E+ +EG++ILFIDEIH ++GAGR EG+MD
Sbjct: 237 KTIFALDLGALIAGAKYRGEFEERLKAVLNEIIASEGRIILFIDEIHNIVGAGRAEGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+L CIGATT++EYRKY+EKDAA ERRFQ V V PSV DT+SILRGLK
Sbjct: 297 AGNLLKPMLARGELHCIGATTIDEYRKYIEKDAALERRFQPVLVNPPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E++E HHGVRI D AL+ AA+LS RYI+ R LPDKAIDL+DEA A +R ++DS P E+D
Sbjct: 357 ERFEIHHGVRITDDALIAAAKLSDRYISDRFLPDKAIDLIDEAAALLRTEIDSMPIELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ RK MQL IE + L+KE++ ++K R+ E+ KE+ L+ + L +++ EKE I EIRR
Sbjct: 417 ITRKIMQLRIEKNVLQKEENPSAKQRIDEIEKEITQLQSRADELSAQWEYEKELIKEIRR 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD------ENLMLT 529
+K++ E + ++EAER YDL R ++L+YG + E++ A LE + + E +L
Sbjct: 477 IKEEIENVKIQIEEAERNYDLNRLSELKYGRLIELQKA---LEKRRQELEKIPPEKRLLK 533
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSR 578
E V ++IA++VS+WTGIPV +L + E++ R++G EA+ AV +++R+R
Sbjct: 534 EEVTEEEIAKIVSKWTGIPVAKLVETERQKILELDKILHKRVVGQDEAIEAVCNAIMRAR 593
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P++P G+FLFLGPTGVGKTELA+ALAE LFD EN ++RIDM+EYME+HSVSRLIG
Sbjct: 594 AGIKDPRKPIGTFLFLGPTGVGKTELARALAEALFDSENNMIRIDMTEYMEKHSVSRLIG 653
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVR +PYSVVLFDE+EKAH VFN LLQ++DDGRLTD +GRTVD
Sbjct: 654 APPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHRDVFNILLQIMDDGRLTDSKGRTVD 713
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NT+IIMTSNLG+E+LL+ + + + R + +E++ +FRPE LNRLDEI++F PL
Sbjct: 714 FKNTIIIMTSNLGSEYLLNAKISNGEIDEETRKLIDRELKLNFRPEFLNRLDEIIIFKPL 773
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ EQ+ K+ L++ ++ +L E+G+++ +T A + V+ ++D +GARPI+R+L+K V
Sbjct: 774 TKEQIIKIIDLRVAEIQQKLIEKGISIRLTQKAKEFVMENAFDINFGARPIKRFLQKNVE 833
Query: 818 TELSRMLVREEIDENSTVYID 838
T ++R +++ I E ++ ID
Sbjct: 834 TLIAREILKGTISEGESIDID 854
>gi|87303275|ref|ZP_01086068.1| ATPase [Synechococcus sp. WH 5701]
gi|87282170|gb|EAQ74131.1| ATPase [Synechococcus sp. WH 5701]
Length = 875
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/861 (52%), Positives = 616/861 (71%), Gaps = 32/861 (3%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENA 58
M+P + FT K AI A +LA Q HL +L+S P G+ + + AG + A
Sbjct: 1 MHPTAEAFTEKAWAAIVAAQQLAQQRRQQQLESEHLFASLISQP-GLATRILEKAGVDVA 59
Query: 59 AQSAERVFNQAMKKL----PSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI 114
A NQA++ PS AP+ + L +V+ +A+ + +GD+ ++++ L+
Sbjct: 60 A------LNQAVESYLASQPSLGAAPENVFLGKGLNEVLDQAEQLKATYGDSFISIEHLL 113
Query: 115 LGLLEDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE 173
L L D + G L +AG + ++K V+ +RG + ++ G T+++L+ YGRDL +
Sbjct: 114 LALAIDDRCGKRLLSQAGTSADKLKDAVQAVRGNQSVTDQNPEG--TYESLEKYGRDLTQ 171
Query: 174 QA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPS 231
A GKLDPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP
Sbjct: 172 AARDGKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPQ 231
Query: 232 NLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTE 291
L + +LIALDMGAL+AGAKYRGEFEERLKAVLKEV +EG+++LFIDEIH V+GAG
Sbjct: 232 ALQNRQLIALDMGALIAGAKYRGEFEERLKAVLKEVTSSEGQIVLFIDEIHTVVGAGAAG 291
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
GSMDA+NL KPMLARG+LRCIGATTL+E+R+++EKD A ERRFQQV+V +P+V DT+SIL
Sbjct: 292 GSMDASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVFVDQPTVEDTISIL 351
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RGLKE+YE HHGVRI D ALV AA LS+RYI R LPDKAIDL+DE+ A +++ + S+PE
Sbjct: 352 RGLKERYEVHHGVRIADNALVAAAVLSSRYIADRFLPDKAIDLMDESAARLKMVITSKPE 411
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
ID L+R+ +QLE+E +L +E D ASK RL + KEL DL ++ L ++++EK ID
Sbjct: 412 AIDELDRRILQLEMEKLSLGRESDAASKDRLERLEKELADLSEQQSTLNAQWQQEKGAID 471
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEV--EAAIGQLEGNQSD-ENLML 528
++ +K++ E++ +++A+R+YDL +AA+L YG + ++ + A+ + E N D E +L
Sbjct: 472 QLSAIKEEIEQVQLQVEQAKRQYDLNKAAELEYGTLADLHKKLAVKEAELNAGDGEKTLL 531
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRS 577
E V D IAEV+++WTGIPV+RL Q+E E+L IG ++AV AVA+++ RS
Sbjct: 532 REEVTEDDIAEVIAKWTGIPVSRLVQSEMEKLLHLEDELHTRVIGQSQAVTAVADAIQRS 591
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGL P +P SFLFLGPTGVGKTEL+KALA QLFD ++ +VRIDMSEYME+H+VSRLI
Sbjct: 592 RAGLSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSDDAMVRIDMSEYMEKHAVSRLI 651
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+EEGGQLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTV
Sbjct: 652 GAPPGYVGYEEGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTV 711
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF NTV+I+TSN+G+ +L +V + +R HFRPE LNRLDE ++F L
Sbjct: 712 DFTNTVLILTSNIGSSSILDLAGDPARHGEMEKRVNEALRAHFRPEFLNRLDETIIFHSL 771
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
E+LR++ LQ++ + RL +R + L + AALD + YDP+YGARP++R +++++
Sbjct: 772 RAEELRQIVELQVQRLRQRLEDRKLGLDLDGAALDWLAGVGYDPVYGARPLKRAIQRQLE 831
Query: 818 TELSRMLVREEIDENSTVYID 838
T +++ ++ + E ST+ +D
Sbjct: 832 TPIAKAILAGQFPEGSTIAVD 852
>gi|339441090|ref|YP_004707095.1| hypothetical protein CXIVA_00260 [Clostridium sp. SY8519]
gi|338900491|dbj|BAK45993.1| hypothetical protein CXIVA_00260 [Clostridium sp. SY8519]
Length = 864
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/871 (51%), Positives = 615/871 (70%), Gaps = 29/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ +AI + +LA G+ + HL VALL G+ + I E
Sbjct: 1 MNIQKFTQKSMQAIQASEKLAYDYGNQEIEQEHLLVALLQQEDGLIPKLI-----EKMEI 55
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ + ++A+ L +T ++ L KV+ A+ KA GD +++V+ L L ++
Sbjct: 56 NRNQFEDEAVAALEKRTKVSGGQVFVGQQLNKVLIEAEDEAKAMGDEYVSVEHLFLCMIR 115
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ I +LF+ G+ R + + +RG + KV S + + T+ L+ YG D+V++A
Sbjct: 116 YPNPAIKELFRTYGITRERFLTVLSTVRGNQ--KVTSDNPEATYDTLEKYGYDMVQRARD 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
K+DPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L +
Sbjct: 174 QKMDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLKN 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L ALDMGAL+AGAKYRGEFEERLKAVL EV ++EG++ILFIDE+H ++GAG+T+G+MD
Sbjct: 234 KKLFALDMGALIAGAKYRGEFEERLKAVLDEVRKSEGEIILFIDELHTIVGAGKTDGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYR+YVEKDAA ERRFQ V V EP+V DT+SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYREYVEKDAALERRFQPVMVDEPTVEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 ERYEVFHGVKITDGALVAAAVLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L RK MQL+IE AL+KE D+ SK RL ++KEL + + + ++ EK ++++++
Sbjct: 414 LNRKIMQLQIEETALKKETDQLSKDRLATLQKELAEYQSEFASKKAQWDNEKADVEKVQK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
L+++ E L ++ A+R YDL +AA+L+YG ++E + E + ++ L + V
Sbjct: 474 LREELEGLNKEIELAQRNYDLNKAAELQYGRKPQLEKELEAEEEKVKNRDMSLVHQNVSE 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D+IA ++SRWTGIPV +L ++E+ +R+IG +AV V E+++RS+AG+
Sbjct: 534 DEIARIISRWTGIPVAKLTESERNKTLHLDEELHKRVIGQDDAVTKVTEAIIRSKAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAKALA LFDDEN +VR+DM+EYME+ SVSRLIGAPPGY
Sbjct: 594 PTKPIGSFLFLGPTGVGKTELAKALAANLFDDENNMVRLDMTEYMEKFSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 654 VGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
IIMTSNLG++HLL G+ G + + A +V+ E++ +FRPE LNRLDEI++F PL+ E
Sbjct: 714 IIMTSNLGSQHLLEGIDANGNINPE-AEARVMNELKGNFRPEFLNRLDEIIMFKPLTKEN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L M D+ RL +R + + +T AA + YDP+YGARP++R+L+K V T +
Sbjct: 773 IAGIVDLLMADLNKRLVDREITVELTPAAKAYITDHGYDPMYGARPLKRYLQKHVETLSA 832
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQK 852
++++ +++ T+ ID + D L +V++
Sbjct: 833 KLILADQVRARDTILIDT--ENDELTAKVKE 861
>gi|84501333|ref|ZP_00999538.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanicola
batsensis HTCC2597]
gi|84390624|gb|EAQ03112.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanicola
batsensis HTCC2597]
Length = 872
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/857 (52%), Positives = 598/857 (69%), Gaps = 20/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT ++ I A +A H + P H+ +LL DP G+ A + AGG A+
Sbjct: 1 MDLSKFTERSRGFIQAAQTIAIRENHQRLAPEHILKSLLDDPEGLAANLVAKAGGN--AR 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-LE 119
+ + + A+ K+P T D++ ++VI A+ D+ + V++L+ L L
Sbjct: 59 AVTQANDAALAKIPVVTGGGDQVYMDNATVRVISEAEKVADKAKDSFVPVERLLTALALV 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
S + GV+ ++ + +R +GR +SA+ + TF+AL+ Y RDL + A GK
Sbjct: 119 KSAAKQALEAGGVSAQKLNEAINDVR--KGRTADSANAEDTFEALEKYARDLTKAAEEGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DP+IGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EG+A RI+ GDVP +L + +
Sbjct: 177 IDPIIGRDDEIRRSMQVLSRRTKNNPVLIGEPGVGKTAIAEGMALRIINGDVPESLRNKK 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ALDMGAL+AGAKYRGEFEERLKA+LKE+E A G++ILFIDE+H ++GAG+T+G+MDAA
Sbjct: 237 LLALDMGALIAGAKYRGEFEERLKAILKEIESAAGEIILFIDEMHTLVGAGKTDGAMDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L CIGATTL+EYRKYVEKDAA RRFQ V V EP+V DT+SILRG+KEK
Sbjct: 297 NLIKPALARGELHCIGATTLDEYRKYVEKDAALARRFQPVMVEEPTVEDTISILRGIKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV A+ LS RYIT R LPDKAIDLVDEA + +R+++DS+PEE+D L+
Sbjct: 357 YELHHGVRISDSALVAASTLSNRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDQLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R +Q++IE+ AL+ E D+ASK RL K L +L++K + +++ E++++ E R LK
Sbjct: 417 RNILQMQIEVEALKLEDDEASKERLARQEKALAELQEKSAEMTAKWQAERDKLGEARELK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
++ + L+ A+R DLARA +L YG I ++E +G+ E Q E +M+ E V P+QI
Sbjct: 477 EQLDRARADLEIAKRNGDLARAGELSYGIIPQLEKQLGEAE-QQEAEGVMVEEAVRPEQI 535
Query: 538 AEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
A+VV RWTGIP T++ + E+E R+IG AV AVA +V R+RAGL +
Sbjct: 536 AQVVERWTGIPTTKMLEGEREKLLRMEDGLHRRVIGQQTAVRAVANAVRRARAGLNDENR 595
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KA+AE LFDD++ +VRIDMSE+ME+HSV+RLIGAPPGYVG+
Sbjct: 596 PLGSFLFLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHSVARLIGAPPGYVGY 655
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
+EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDG LTDGQGRTVDF+ T+I++
Sbjct: 656 DEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVL 715
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLGA+ L G RD V+ V+ HFRPE LNRLDEI+VFD L+ + +
Sbjct: 716 TSNLGAQALSQLPEGADAGAAKRD-VMDAVKAHFRPEFLNRLDEIIVFDRLARGDMAGIV 774
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+QM + RLA R + L + +AA + E YDP++GARP++R ++K V L+ L+
Sbjct: 775 DIQMARLLKRLAGRNIRLELDEAAKKWLADEGYDPVFGARPLKRVIQKAVQDPLAEALLA 834
Query: 827 EEIDENSTVYIDASPKG 843
E+ + TV + A G
Sbjct: 835 GEVKDGDTVPVTAGSDG 851
>gi|302793610|ref|XP_002978570.1| hypothetical protein SELMODRAFT_176984 [Selaginella moellendorffii]
gi|300153919|gb|EFJ20556.1| hypothetical protein SELMODRAFT_176984 [Selaginella moellendorffii]
Length = 870
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/850 (51%), Positives = 597/850 (70%), Gaps = 30/850 (3%)
Query: 12 EAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA--QSAERVFNQA 69
+A+ A E+A ++ HL ALL +G+ + AG +N+A Q+ ER ++
Sbjct: 4 QAVVSAVEVAQTSRQQVVETEHLLKALLEQKNGLARRIFTKAGIDNSALLQATERYIDRQ 63
Query: 70 MKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG-DLFK 128
P T +L ++ RA+ GDT+ +++ L+L L ED +IG +LF
Sbjct: 64 ----PKVTGNISGAMVGQSLETLLDRAKVHMDDFGDTYTSIEHLVLALAEDIRIGKELFG 119
Query: 129 EAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDE 186
+ G+ K + +RG + KV + + ++AL+ +G DL E A GKLDPVIGRD+
Sbjct: 120 QFGLNAKATKDAINAIRGSQ--KVTDQAPENKYEALEKFGVDLTEMARQGKLDPVIGRDD 177
Query: 187 EIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGAL 246
EIRR ++IL RRTKNNPV+IGEPGVGKTA+ EGLAQRIV+GDVP LA+ +LI+LD+GAL
Sbjct: 178 EIRRCIQILCRRTKNNPVVIGEPGVGKTAIAEGLAQRIVQGDVPEALANRKLISLDLGAL 237
Query: 247 VAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLAR 306
+AGAK++GEFE+RLKAVLKEV+E+EG ++LFIDEIH+V+GAG T G+MDA NL KPML R
Sbjct: 238 IAGAKFQGEFEDRLKAVLKEVKESEGYIVLFIDEIHMVVGAGATSGAMDAGNLLKPMLGR 297
Query: 307 GQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRI 366
G+LRCIGATT++EYRKY+EKDAA ERRFQQVYV EP+V DT+SILRGL+EKYE HHGV+I
Sbjct: 298 GELRCIGATTIKEYRKYLEKDAALERRFQQVYVPEPAVEDTISILRGLREKYELHHGVKI 357
Query: 367 QDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIE 426
D ALV AA LS+RYI+ R LPDKAIDLVDEA A ++++ S+P +D ++R ++LE+E
Sbjct: 358 SDNALVEAAVLSSRYISDRFLPDKAIDLVDEAAAKLKMERTSKPTALDEIDRAIIKLEME 417
Query: 427 LHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREELLFA 486
+LE + DKAS+ RL ++ EL L++K + L +++ EK + I K++ + +
Sbjct: 418 RLSLEHDNDKASRERLQKLEAELASLKEKQKALQQQWEMEKSIMTRINSCKEEIDRVNLE 477
Query: 487 LQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTETVGPDQIAEVVS 542
+Q+AER YDL RAA+L+YG + ++ + + EG + E ML E + D IAE+VS
Sbjct: 478 IQQAERDYDLNRAAELKYGVLINLQKQLKETEGELATYRKSEKTMLREEITADDIAEIVS 537
Query: 543 RWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQPTGSF 591
+WT IPV+RL Q+E E RLIG AV AVA+++ RSRAGL P +P SF
Sbjct: 538 KWTKIPVSRLLQSEMEKLLQLDDHLHKRLIGQDPAVKAVADAIRRSRAGLSDPNRPIASF 597
Query: 592 LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQ 651
+F+GPTGVGKTELAKALAE LFD + L+R DMSEYME+H+VSRLIGAPPGYVG+EEGGQ
Sbjct: 598 MFMGPTGVGKTELAKALAEYLFDTDKALLRFDMSEYMEKHAVSRLIGAPPGYVGYEEGGQ 657
Query: 652 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLG 711
LTE+VRRRPYSVVLFDE+EKAH VFN LQ+LDDGR+TD QGRTV+F NTV+IMTSNLG
Sbjct: 658 LTESVRRRPYSVVLFDEIEKAHGDVFNIFLQILDDGRVTDSQGRTVNFTNTVVIMTSNLG 717
Query: 712 AEHLLSGMMG----KVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
++H+L + K Q ++ V++ R FRPE +NR+DE +VF PL +Q++ + +
Sbjct: 718 SQHILDALKSSGNKKAAYQAMKETVMEVARSTFRPEFMNRVDEFIVFQPLDVDQIQNIVK 777
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQ+++V RL R ++L +TD A+ + YDP YGARP++R +++ V EL++ ++R
Sbjct: 778 LQLQNVEKRLQHRKISLKITDDAVQVFAKLGYDPNYGARPVKRVIQQYVTNELAKGILRG 837
Query: 828 EIDENSTVYI 837
+ E TV I
Sbjct: 838 DFKEEDTVLI 847
>gi|269792687|ref|YP_003317591.1| ATP-dependent chaperone ClpB [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100322|gb|ACZ19309.1| ATP-dependent chaperone ClpB [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 871
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/862 (51%), Positives = 607/862 (70%), Gaps = 29/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG--GENA 58
MN D++T+K+ EA+ A + A H P HL +ALL +G+ + + G +
Sbjct: 1 MNLDRYTNKSQEALMEAQKEAVRRSHQAIDPEHLLLALLIQENGLIGRILEREGISSQGI 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q ER ++ K+ ++ + + K++ A+ K D +++V+ L L +L
Sbjct: 61 VQELERELSR-RPKVSGPGMEGGKVYLTQRMSKLLVDAEDEAKGMKDQYVSVEHLFLAIL 119
Query: 119 E---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
+ DS + K V R + ++RG G++V S + T++AL+ YGRDLV+ A
Sbjct: 120 KEAGDSPSKRILKTFNVDRERFLKALAEVRG--GQRVTSQDPEDTYEALEKYGRDLVKMA 177
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRDEEIRRV+RILSR+TKNNPVLIGEPGVGKTA+ EGLAQRI++GDVP L
Sbjct: 178 KEGKLDPVIGRDEEIRRVIRILSRKTKNNPVLIGEPGVGKTAIAEGLAQRILKGDVPEGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + ALDMG+L+AGAK+RGEFEERLK+VL E++ ++G++ILFIDE+H V+GAG+ EG+
Sbjct: 238 KDKTVFALDMGSLIAGAKFRGEFEERLKSVLSEIKRSDGRIILFIDELHTVVGAGKAEGA 297
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA N+ KPMLARG+LRCIGATTL+EYRKY+EKD A ERRFQ V V P V DTVSILRG
Sbjct: 298 MDAGNMLKPMLARGELRCIGATTLDEYRKYIEKDPALERRFQPVLVEAPDVEDTVSILRG 357
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE++E HHGVRIQD ALV AA LS RYIT R+LPDKAIDLVDEACA++R ++DS P E+
Sbjct: 358 LKERFEVHHGVRIQDGALVAAAVLSNRYITDRYLPDKAIDLVDEACAHIRTEIDSMPAEL 417
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D R+ MQLEIE AL KE D AS RL +R+EL + R++ L +Y++EK I EI
Sbjct: 418 DQAVRRVMQLEIEEAALSKETDPASAKRLEALRRELAEARNEADALRAQYEREKSAIGEI 477
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL-----ML 528
R ++++ EE ++EAER YDL AA L++G + ++ + Q E E L +L
Sbjct: 478 RAIRERIEETKRRIEEAERTYDLNLAAQLKHGELPKLTRELAQKEAEL--EKLFGGTRLL 535
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRS 577
E V P++IAE+VSRWTGIPV+R+ + E++ R++G EAV V+E+VLR+
Sbjct: 536 KEEVTPEEIAEIVSRWTGIPVSRIQEGERDKLLRLEEILHKRVVGQDEAVRLVSEAVLRA 595
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAG+ P++P GSFLFLGPTGVGKTELAKALAE LFD E+ ++RIDMSEYME+HSVSRLI
Sbjct: 596 RAGIKDPRRPIGSFLFLGPTGVGKTELAKALAEALFDSEDNMIRIDMSEYMEKHSVSRLI 655
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG++EGGQLTE VRR+PYSV+LFDEVEKAH VFNTLLQ+LDDGR+TD G+TV
Sbjct: 656 GAPPGYVGYDEGGQLTEQVRRKPYSVILFDEVEKAHPDVFNTLLQILDDGRVTDSHGKTV 715
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+N VII+TSN+G++H LS + + A + + EV+ FRPE +NRLDE++VF PL
Sbjct: 716 DFKNCVIILTSNVGSQH-LSRCTDPMAFEEASKRAIDEVKSLFRPEFINRLDEMIVFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
E++ + + + V+ RL +R + L T A++ + + +DP+YGARP++R +++ V
Sbjct: 775 GKEEIGAIVEMLLGKVSERLKDRNMTLQWTPRAVEAIAHQGFDPVYGARPLKRAIQRMVE 834
Query: 818 TELSRMLVREEIDENSTVYIDA 839
T L++ +++ ++ E V +DA
Sbjct: 835 TPLAKAILKGDLQEGGKVSLDA 856
>gi|302793702|ref|XP_002978616.1| hypothetical protein SELMODRAFT_418380 [Selaginella moellendorffii]
gi|300153965|gb|EFJ20602.1| hypothetical protein SELMODRAFT_418380 [Selaginella moellendorffii]
Length = 963
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/861 (51%), Positives = 604/861 (70%), Gaps = 30/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
++P +T+ +A+ A ELA S HL ALL +G+ + AG +N+A
Sbjct: 86 LSPKDYTNMAWQAMVSAVELAQSNRQQVVETEHLLKALLEQKNGLARRIFTKAGIDNSAL 145
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q+ ER + K + + A +L ++ RA+ K GD + +++ L+L L
Sbjct: 146 LQATERYIERQPKVAGNISGAM----LGQSLDSLLDRAKGHMKDFGDNYTSIEHLVLALA 201
Query: 119 EDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
ED +IG +LF + G+ K + +RG + KV + + ++AL+ +G DL E A
Sbjct: 202 EDIRIGKELFGQFGLNAKATKDAITAIRGTQ--KVTDQAPENKYEALEKFGVDLTEMARQ 259
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRR ++IL RRTKNNPV+IGEPGVGKTA+ EGLAQRIV+GDVP LA+
Sbjct: 260 GKLDPVIGRDDEIRRCIQILCRRTKNNPVVIGEPGVGKTAIAEGLAQRIVQGDVPEALAN 319
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LI+LD+GAL+AGAK++GEFE+RLKAVLKEV+E+EG ++LFIDEIH+V+GAG T G+MD
Sbjct: 320 RKLISLDLGALIAGAKFQGEFEDRLKAVLKEVKESEGYIVLFIDEIHMVVGAGATSGAMD 379
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPML RG+LRCIGATT++EYRKY+EKDAA ERRFQQVYVAEP+V D +SILRGL+
Sbjct: 380 AGNLLKPMLGRGELRCIGATTIKEYRKYLEKDAALERRFQQVYVAEPAVEDAISILRGLR 439
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGV+I D ALV AA LS+RYI+ R LPDKAIDLVDEA A ++++ S+P +D
Sbjct: 440 EKYELHHGVKISDNALVEAAILSSRYISDRFLPDKAIDLVDEAAAKLKMERTSKPTALDE 499
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R ++LE+E ++E + DKAS+ RL ++ EL L++K + L +++ EK + I
Sbjct: 500 IDRVIIKLEMERLSVEHDNDKASRERLQKLEAELASLKEKQKALQQQWEMEKSIMTRINS 559
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTET 531
+K++ + + +Q+AER YDL RAA+L+YG + ++ + + EG + E ML E
Sbjct: 560 IKEEIDRVNLEIQQAERDYDLNRAAELKYGVLTNLQKQLNEAEGELATYRKSEKAMLREE 619
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
+ D IAE+VS+WT IPV+RL Q+E E RLIG AV AVA+++ RSRAG
Sbjct: 620 ITADDIAEIVSKWTKIPVSRLLQSEMEKLLHLDEHLHKRLIGQDPAVQAVADAIRRSRAG 679
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P SF+F+GPTGVGKTELAKALAE LFD + L+R DMSEYME+H+VSRLIGAP
Sbjct: 680 LADPNRPIASFMFMGPTGVGKTELAKALAEYLFDTDKALLRFDMSEYMEKHAVSRLIGAP 739
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTE+VRRRPYSVVLFDE+EKAH VFN LQ+LDDGR+TD QGRTV+F
Sbjct: 740 PGYVGYEEGGQLTESVRRRPYSVVLFDEIEKAHADVFNIFLQILDDGRVTDSQGRTVNFT 799
Query: 701 NTVIIMTSNLGAEHLLSGMMG----KVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
NTV+IMTSNLG++H+L + Q ++ V++ R FRPE +NR+DE +VF P
Sbjct: 800 NTVVIMTSNLGSQHILDALKSSGDKNAAYQSMKETVMEVARSTFRPEFMNRVDEFIVFQP 859
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L +Q++++ +LQ+++V RL R ++L +TD A+ + YDP YGARP++R +++ V
Sbjct: 860 LDVDQIQEIVKLQLQNVEKRLQHRKISLKITDDAVQVFAKLGYDPNYGARPVKRVIQQYV 919
Query: 817 VTELSRMLVREEIDENSTVYI 837
EL++ +++ E E TV I
Sbjct: 920 TNELAKGILKGEFKEEDTVLI 940
>gi|363892184|ref|ZP_09319352.1| ATP-dependent chaperone ClpB [Eubacteriaceae bacterium CM2]
gi|361964134|gb|EHL17178.1| ATP-dependent chaperone ClpB [Eubacteriaceae bacterium CM2]
Length = 862
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/871 (49%), Positives = 617/871 (70%), Gaps = 31/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
MN +K T K+ EA+ A A + + + +HL ALL +GI + ++ N +
Sbjct: 1 MNLEKLTQKSQEAVLQAQNTALNNSNQEIDSIHLLKALLEQDNGIIPKILSLMNINVSSL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAP-DEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ + N KLP + + + AS L +++ AQ K GD +++V+ L L +
Sbjct: 61 ISDVDDMVN----KLPKVSGSSISNVYASRKLSELLSNAQNESKNFGDEYVSVEHLFLAM 116
Query: 118 LED--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++ + I D+F + G+ +EK+RG ++V + + + T+ L+ YGRDLV+ A
Sbjct: 117 FKEKGTIISDIFSKFGIKRQDFMQRLEKIRG--NQRVTNENPEDTYNVLEKYGRDLVDMA 174
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGR++EIRR +RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRI++ DVP +L
Sbjct: 175 RNGKLDPVIGREDEIRRAIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKNDVPDSL 234
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + ALDMG+L+AGAKYRGEFEERLKA+LKE+E+++G++I+FIDEIH ++GAG+TEGS
Sbjct: 235 KDKTIFALDMGSLIAGAKYRGEFEERLKAILKEIEKSDGRIIMFIDEIHTIIGAGKTEGS 294
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATT++EYRKY+EKDAA ERRFQ + V +P+V DT+SILRG
Sbjct: 295 MDAGNLLKPMLARGELHCIGATTIDEYRKYIEKDAALERRFQPIMVDQPTVEDTISILRG 354
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
+KEK+E HHGVRI D A++ +A LS +YI R LPDKAIDL+DEA A +R Q+DS P ++
Sbjct: 355 IKEKFEIHHGVRISDSAIIASAVLSNKYINDRFLPDKAIDLMDEAAAMIRTQIDSMPTDL 414
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D++ RK MQ EIE AL+KE D+ SK RLV + +EL L+D + + E++ I ++
Sbjct: 415 DDMSRKIMQFEIEQQALKKETDEQSKKRLVVLEEELSKLKDDYKNKKATWDVERQSIGKV 474
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE--NLMLTET 531
+ L+++ E + + A+R YDL + L+YG + E+E + + Q ++ N +L E
Sbjct: 475 KELQEEIENIKHQMDIAQRNYDLETLSRLKYGKLVELEKQLQEQIKLQDEKKTNSLLKEE 534
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IA++VS+WT IPV++L + E+++L IG EAV +VA S+LR+R+G
Sbjct: 535 VTEEEIAQIVSQWTNIPVSKLVETERDKLLSLESILHKRVIGQDEAVTSVANSILRARSG 594
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSF+FLGPTGVGKTELAKAL++ LFD E+ ++RIDMSEY E+H+V+RLIGAP
Sbjct: 595 LKDPRKPIGSFIFLGPTGVGKTELAKALSQALFDSEDNIIRIDMSEYQEKHTVARLIGAP 654
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYS++LFDE+EKAH VFN LLQ+LDDGRLTD +G+TV+F+
Sbjct: 655 PGYVGYEEGGQLTEAVRRKPYSIILFDEIEKAHPEVFNILLQLLDDGRLTDSKGKTVNFK 714
Query: 701 NTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+TV+IMTSN+G++ LL + GKVT + A+ +V ++ F+PE LNR+D+I++F+PL
Sbjct: 715 DTVVIMTSNIGSQILLDSVKESGKVTDK-AKTEVEDMLKYSFKPEFLNRIDDIIMFNPLE 773
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
Q+ ++ L +KD+ RL +R + L +TD A +++ E+Y P GARP++R+L++ V T
Sbjct: 774 KSQILQIVDLCLKDIQKRLEDREIVLNITDKAKELIANEAYTPELGARPVKRYLQRNVET 833
Query: 819 ELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
L + +++ + E S V ID GD++V R
Sbjct: 834 LLGKEIIKGTVTEGSKVTIDVD--GDDIVIR 862
>gi|329848416|ref|ZP_08263444.1| ATP-dependent chaperone ClpB [Asticcacaulis biprosthecum C19]
gi|328843479|gb|EGF93048.1| ATP-dependent chaperone ClpB [Asticcacaulis biprosthecum C19]
Length = 859
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/850 (51%), Positives = 595/850 (70%), Gaps = 19/850 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ KT + I A LA ++ H FTP+H+ AL D G+ ++ + AGG NA
Sbjct: 1 MNIEKYSEKTQKLIQSAQSLAQASSHQYFTPVHVLKALTEDKDGLSSRLVALAGG-NADA 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
A V + A K+PS + ++ + K+ A+ + GD+ + D+L++ L
Sbjct: 60 FAGAV-DAAFNKIPSVSGGNTQLYMNNDTAKLFNEAETEAQKAGDSFVTADRLLVAALNT 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ K A + + +K R +G+ ++AS + F ALK Y RDL E A GK+
Sbjct: 119 GDGAAVLKAANLNLKTLKEAQTAFR--KGKTADTASAENGFDALKKYARDLTEAAESGKI 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRR +++L+RRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L + +L
Sbjct: 177 DPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPESLKNKKL 236
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
+LDMGAL+AGAKYRGEFEERLKAVL EV AEG+++LFIDE+H ++GAG+ +G+MDA+N
Sbjct: 237 FSLDMGALIAGAKYRGEFEERLKAVLNEVTAAEGEIVLFIDEMHTLVGAGKADGAMDASN 296
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DT+SILRGLKEKY
Sbjct: 297 LLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRGLKEKY 356
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D A+V AA LS RYI R LPDKAIDL+DEA + VR+ +DS+PEE+D L+R
Sbjct: 357 EVHHGVRISDSAIVSAATLSNRYIADRFLPDKAIDLIDEAASRVRMAVDSKPEELDELDR 416
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+ +QL+IE AL KE D AS+ RL ++ EL+DL K L ++K EK+++ R ++
Sbjct: 417 RVVQLKIEREALNKETDAASRTRLDKLTDELEDLEVKSMDLTTKWKAEKDKVGSAARARE 476
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+ L A+R DL +A+++ YG I +E + + E S E + E V QIA
Sbjct: 477 ALDRARIELANAQRGGDLQKASEILYGRIPALEKELAKAE-VASQETPLTPEVVDASQIA 535
Query: 539 EVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQP 587
+VVSRWTGIPV ++ + E+++L +G EA+ AV+++V R+RAGL P +P
Sbjct: 536 QVVSRWTGIPVDKMLEGERDKLLRMEDQLRKRVVGQDEALAAVSDAVRRARAGLKDPNRP 595
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
GSFLFLGPTGVGKTEL KALAE LFDDE + R+DMSEYME+HSVSR+IGAPPGYVG++
Sbjct: 596 IGSFLFLGPTGVGKTELNKALAEFLFDDETAITRLDMSEYMEKHSVSRMIGAPPGYVGYD 655
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGR VDFRNT+I+MT
Sbjct: 656 EGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRVVDFRNTLIVMT 715
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLG++ +L M +++ R V++ VR+HFRPE LNR+DE+++F L + + R
Sbjct: 716 SNLGSD-VLVNMDEATSIETVRPLVMEAVRRHFRPEFLNRVDEMILFHRLDKVHMHDIVR 774
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
+Q+K + +A+R + L++ DAAL+ + + +DP YGARP++R ++K +V ++R ++
Sbjct: 775 IQLKGLEKLMADREMTLSIDDAALNYLADKGFDPAYGARPLKRVIQKTLVDGIARKILAG 834
Query: 828 EIDENSTVYI 837
E + + +
Sbjct: 835 EFGDGDVIQV 844
>gi|453072930|ref|ZP_21975943.1| ATP-dependent chaperone ClpB [Rhodococcus qingshengii BKS 20-40]
gi|452756700|gb|EME15108.1| ATP-dependent chaperone ClpB [Rhodococcus qingshengii BKS 20-40]
Length = 877
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/863 (52%), Positives = 603/863 (69%), Gaps = 31/863 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ T K+ EA+ A +AT GH + HL +AL+ G+ + + AG A
Sbjct: 1 MDTGSLTEKSREALQEAQNVATRMGHTEVDGEHLLLALVDQQDGLVPRLLEQAGANVEAL 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
++ ++ + + P + P ++ + L K++ A+ K D++++V+ L++ L
Sbjct: 61 RSD--LDRELSRRPKVSGPGATPGQVMITQRLAKLLDAAEREAKRLKDSYVSVEHLVMAL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ S G + GV + + K+RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 119 SEEGSASAAGRVLASHGVTRDAFLTALTKVRGNQ--RVTSATPEGAYEALEKYGRDLVSE 176
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGKLDPVIGRD EIRRV +ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP
Sbjct: 177 GRAGKLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-- 290
L D + +LDMG+LVAGAKYRGEFEERL+AVL EV+ AEG+++LF+DE+H V+GAG
Sbjct: 237 LRDKTIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGRILLFVDELHTVVGAGSVGG 296
Query: 291 EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSI 350
EGS+DA N+ KPMLARG+L IGATTL+EYRK++E DAA ERRFQ V V EPS D +SI
Sbjct: 297 EGSLDAGNMLKPMLARGELHMIGATTLDEYRKHIESDAALERRFQTVLVDEPSAEDAISI 356
Query: 351 LRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQP 410
LRGL+E+ E HGV+IQD ALV A LS RYIT R LPDKAIDLVDEACA +R ++DS P
Sbjct: 357 LRGLRERLEVFHGVKIQDGALVAAVTLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMP 416
Query: 411 EEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
E+D L RK +LEIE AL KE D ASKARL E+RKEL DLR + +++ E++ I
Sbjct: 417 AELDELTRKVTRLEIEEAALSKETDAASKARLEELRKELADLRAEADARHAQWEAERQAI 476
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENL 526
++ L+ E L + AER YDL RAA+LRYG I E +EAA QL Q N
Sbjct: 477 RRVQELRGDLERLRVEAEAAERNYDLNRAAELRYGEITEFERRLEAAEEQLATRQG-RNP 535
Query: 527 MLTETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVL 575
+L E V D+IAE+V+ WTGIPV RL + E+E R++G EAV VA++V+
Sbjct: 536 LLREVVTEDEIAEIVAAWTGIPVARLQEGEREKLLKLDEILHERVVGQDEAVQLVADAVI 595
Query: 576 RSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSR 635
R+R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E+ +VR+DMSEY E+H+VSR
Sbjct: 596 RARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQERHTVSR 655
Query: 636 LIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGR 695
LIGAPPGYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQVLDDGR+TD QGR
Sbjct: 656 LIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGR 715
Query: 696 TVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVF 754
VDFRNTVIIMTSN+G++HLL G+ ++ AR++V+ E+R HFRPE LNR+D+IV+F
Sbjct: 716 QVDFRNTVIIMTSNIGSQHLLDGVTADGEIKPDARERVMAELRGHFRPEFLNRVDDIVLF 775
Query: 755 DPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEK 814
PL+ Q+ + LQ+ D+ RL+ER + L +T A ++ +DP+YGARP+RR++
Sbjct: 776 SPLTLPQIEYIVELQLTDLRNRLSERQIHLEITPEARRLIAEHGFDPVYGARPLRRYIAH 835
Query: 815 KVVTELSRMLVREEIDENSTVYI 837
+V T++ R L+R EI + T+ +
Sbjct: 836 EVETKIGRALLRGEIKPDGTISV 858
>gi|94986571|ref|YP_594504.1| ATPases with chaperone activity, ATP-binding subunit [Lawsonia
intracellularis PHE/MN1-00]
gi|442555385|ref|YP_007365210.1| ATP-dependent chaperone ClpB [Lawsonia intracellularis N343]
gi|94730820|emb|CAJ54182.1| ATPases with chaperone activity, ATP-binding subunit [Lawsonia
intracellularis PHE/MN1-00]
gi|441492832|gb|AGC49526.1| ATP-dependent chaperone ClpB [Lawsonia intracellularis N343]
Length = 877
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/872 (52%), Positives = 607/872 (69%), Gaps = 27/872 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K+ EA++ A L+ GH + HLA+AL +G + + A + +
Sbjct: 1 MDVNKLTQKSQEALSEAQRLSAQYGHQEVDVEHLALALTIQENGFVPRVLEQA--KVHVK 58
Query: 61 SAERVFNQAMKKLPS-QTPAPD--EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ +KK PS + P + +I S L KVI A+ K GD +++V+ L
Sbjct: 59 VVISALEEVLKKRPSVRGPGSEMGKITISQRLSKVIANAELLAKRLGDEYVSVEHLFAEC 118
Query: 118 L---EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
L E + +G + KE + R + +RG +V S + + +++ALK YGRDLVE
Sbjct: 119 LNEPESTGMGQVAKEIHLTSQRFIEVMLAVRGP--HRVTSPTPEDSYEALKKYGRDLVEA 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRRV+RILSRRTKNNPVLIGE GVGKTA+VEGLA RIV+GDVP
Sbjct: 177 ARKGKLDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIVEGLAFRIVQGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMG+L+AGAKYRGEFEERLKAVL EVE++EG+++LFIDE+H ++GAG+ +G
Sbjct: 237 LKDKSIFALDMGSLIAGAKYRGEFEERLKAVLTEVEKSEGRIVLFIDELHTIVGAGKADG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EPSV DT+SILR
Sbjct: 297 AMDAGNFLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVMVDEPSVQDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHGVRI D A+V A LS RYI+ R LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLKERFEVHHGVRISDSAIVEAVVLSDRYISDRQLPDKAIDLIDEAAAMIRTEIDSLPSE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK MQLEIE AL KE D AS RLV + +EL L+ L +++ EK ID
Sbjct: 417 LDEVNRKIMQLEIEREALRKESDSASHERLVRLEEELKVLQSTQSELKKQWETEKGSIDS 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETV 532
+R +K++ E+ A+ EA R +L++AA+L+Y + E+E + + E +++D +L E V
Sbjct: 477 LRNIKEQIEQTRLAIDEATRNGELSKAAELKYSKLFELEKQLEERE-SKADGPRLLKEEV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
PD +A +V+RWTGIPVTRL ++EKE+L IG EAVN + +VLR+RAGL
Sbjct: 536 RPDDVANIVARWTGIPVTRLLESEKEKLLRLPDTLHERVIGQDEAVNVICNAVLRTRAGL 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P++P GSF+FLGPTGVGKTEL KALAE LFD E +VR DMSEYME+HSV+RLIGA P
Sbjct: 596 SDPKRPQGSFIFLGPTGVGKTELCKALAESLFDTEENMVRFDMSEYMEKHSVARLIGAHP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLT AV+R+PYSV+LFDEVEKAH VFN LQ+LDDGRLTD GRT++FRN
Sbjct: 656 GYVGYEEGGQLTNAVKRKPYSVILFDEVEKAHPDVFNIFLQLLDDGRLTDNAGRTINFRN 715
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
T+IIMTSN+GA LL G+ + + + V+ ++++HFRPE LNR+D++V+F PL +
Sbjct: 716 TIIIMTSNIGAYKLLEGISPDGSFHEGVYESVMGDLKQHFRPEFLNRVDDVVLFKPLLAD 775
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAES-YDPIYGARPIRRWLEKKVVTE 819
Q+ + LQ++ + RL + V L +T +A + LAE+ YDP YGARP++R+L++ V T
Sbjct: 776 QISSIIDLQLRSLKKRLESQKVTLELTHSA-HLYLAENGYDPHYGARPLKRYLQRVVETP 834
Query: 820 LSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
L++M++ ++ EN + ID S +L Y V+
Sbjct: 835 LAKMIISGKVHENQQIVIDYSESDSSLQYGVK 866
>gi|47568371|ref|ZP_00239072.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus G9241]
gi|47554919|gb|EAL13269.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus G9241]
Length = 866
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/874 (51%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDK+IDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKSIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|213965100|ref|ZP_03393298.1| ATP-dependent chaperone ClpB [Corynebacterium amycolatum SK46]
gi|213952214|gb|EEB63598.1| ATP-dependent chaperone ClpB [Corynebacterium amycolatum SK46]
Length = 859
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/858 (53%), Positives = 599/858 (69%), Gaps = 35/858 (4%)
Query: 7 THKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAERVF 66
T KT E + A + ATSAG+ P H+ VALL GI A + A G N + R
Sbjct: 6 TTKTGEVLQEAMKAATSAGNPDIRPGHILVALLEQKEGIAAPLLE-AAGVNPSGVLTRA- 63
Query: 67 NQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE-DSQIG 124
+ + PS + A P + + + A+ GD +++ + L++G+ S+
Sbjct: 64 KELVAGYPSASGANMANPQFNRDAVNALNAAEELAGELGDEYVSTEILLIGVATGQSEAA 123
Query: 125 DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVI 182
+ + AG +K + +RG RKV + + + +QAL+ Y DL +A GK+DPVI
Sbjct: 124 TVLQSAGATAEALKGALTSVRGS--RKVTTENPEEQYQALEKYATDLTARAREGKIDPVI 181
Query: 183 GRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALD 242
GRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLA+RIV GDVP +L L++LD
Sbjct: 182 GRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLMSLD 241
Query: 243 MGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFK 301
+G++VAGAKYRGEFEERLKAVL E++E++G++I FIDEIH ++GAG T +GSMDA N+ K
Sbjct: 242 LGSMVAGAKYRGEFEERLKAVLDEIKESDGQIITFIDEIHTIVGAGATGDGSMDAGNMIK 301
Query: 302 PMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGH 361
PMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV+V EPSV D + ILRGLKE+YE H
Sbjct: 302 PMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDAIGILRGLKERYEVH 361
Query: 362 HGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRM 421
HGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS PEEID+ ER
Sbjct: 362 HGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPEEIDSAERIVR 421
Query: 422 QLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKRE 481
+LEIE ALEKE D ASK RL ++R+EL D R+KL L R++ EK ID++R ++++ +
Sbjct: 422 RLEIEEMALEKETDIASKERLDKLREELADEREKLNALKTRWQNEKSSIDDVRSVREELD 481
Query: 482 ELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD--ENLMLTETVGPDQIAE 539
L ++AER D R A+LRYG I E+E + E + +D EN ML E V P ++AE
Sbjct: 482 ALRTESEKAEREGDYGRVAELRYGRIPELEKKLEAAEESVADAEENSMLKEEVTPQEVAE 541
Query: 540 VVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQPT 588
VVS WTGIP ++ Q E E R++G AV AV+++V RSRAG+ P +PT
Sbjct: 542 VVSAWTGIPAGKMMQGETEKLLEMELNLGRRVVGQNAAVEAVSDAVRRSRAGVADPNRPT 601
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
GSFLFLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RLIGAPPGYVG++
Sbjct: 602 GSFLFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLIGAPPGYVGYDA 661
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTEAVRRRPY+VVLFDEVEKAH VF+ LLQVLD+GRLTDGQGRTVDFRNT++I+TS
Sbjct: 662 GGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS 721
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
NLGA +Q++ V+ F+PE +NRLD++V+FDPL+ EQLR + +
Sbjct: 722 NLGAGG-------------THEQIMDAVKMAFKPEFINRLDDVVIFDPLTSEQLRGIVDI 768
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
Q++++A RL R + L V D ALD + YDP YGARP+RR ++K + EL+R L+ +
Sbjct: 769 QVRNLAERLEARRLVLDVADGALDWLSERGYDPAYGARPLRRLVQKAIGDELARRLLAGD 828
Query: 829 IDENSTVYIDASPKGDNL 846
+ + V + + G++L
Sbjct: 829 VRDGDRVEVTVADDGESL 846
>gi|377559991|ref|ZP_09789520.1| chaperone ClpB [Gordonia otitidis NBRC 100426]
gi|377522859|dbj|GAB34685.1| chaperone ClpB [Gordonia otitidis NBRC 100426]
Length = 876
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/862 (53%), Positives = 600/862 (69%), Gaps = 29/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
M+ T K+ EA+ A LAT GH + HL +AL+ G+ + + AG A
Sbjct: 1 MDTGSLTEKSREALQEAQNLATRMGHTEVDGEHLLLALVDQQEGLVPRLLEQAGANVDAL 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
ER ++ K+ P ++ + L K++ A+ K D++++V+ L++ L
Sbjct: 61 RSDLERELSR-RPKVSGPGATPGQVMITQRLAKLLDAAEREAKRLKDSYVSVEHLVMALS 119
Query: 119 ED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ- 174
E+ S G + GV + + +RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 120 EEGSTSAAGRVLTSHGVTREAFLAALTTVRGNQ--RVTSATPEGAYEALEKYGRDLVSEG 177
Query: 175 -AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
AGKLDPVIGRD EIRRV +ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP L
Sbjct: 178 RAGKLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT--E 291
D + +LDMG+LVAGAKYRGEFEERL+AVL EV+ AEG+++LF+DE+H V+GAG E
Sbjct: 238 RDKTIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGRILLFVDELHTVVGAGSVGGE 297
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
GS+DA N+ KPMLARG+L IGATTL+EYRK++E DAA ERRFQ V V EP + D +SIL
Sbjct: 298 GSLDAGNMLKPMLARGELHMIGATTLDEYRKHIESDAALERRFQTVLVDEPGIEDAISIL 357
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RGL+E+ E HGV+IQD ALV A LS RYIT R LPDKAIDLVDEACA +R ++DS P
Sbjct: 358 RGLRERLEVFHGVKIQDGALVAAVTLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPA 417
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
E+D L RK +LEIE AL KE D ASK RL E+RKEL DLR + +++ E++ I
Sbjct: 418 ELDELTRKVTRLEIEEAALSKETDAASKTRLEELRKELADLRAEADARHAQWEAERQAIR 477
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVE----AAIGQLEGNQSDENLM 527
++ L+ + E L +EAER YDL RAA+LRYG I E+E AA QL Q N +
Sbjct: 478 RVQELRGELERLRHEAEEAERNYDLNRAAELRYGEITELERKLKAAEEQLATRQG-RNPL 536
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLR 576
L E V D+IAE+V+ WTGIPV RL + E+E R+IG EAV VA++V+R
Sbjct: 537 LREVVTEDEIAEIVAAWTGIPVARLQEGEREKLLKLDEILHERVIGQDEAVQLVADAVIR 596
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
+R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E+ +VR+DMSEY E+H+VSRL
Sbjct: 597 ARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQERHTVSRL 656
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
IGAPPGYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQVLDDGR+TD QGR
Sbjct: 657 IGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQ 716
Query: 697 VDFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFD 755
VDFRNTVIIMTSN+G++HLL G+ ++ AR +VL E+R HFRPE LNR+D+IV+F
Sbjct: 717 VDFRNTVIIMTSNIGSQHLLEGVTADGEIKPDARARVLAELRGHFRPEFLNRVDDIVLFT 776
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PL+ Q+ + LQ+ D+ RL+ER + L +T A ++ +DP+YGARP+RR++ +
Sbjct: 777 PLTLPQIEHIVELQLTDLRNRLSERQIHLNITPEARRLIAEHGFDPVYGARPLRRYIAHE 836
Query: 816 VVTELSRMLVREEIDENSTVYI 837
V T++ R L+R EI+ T+ +
Sbjct: 837 VETKIGRALLRGEIEPGGTISV 858
>gi|374308432|ref|YP_005054863.1| ATP-dependent chaperone protein ClpB [Filifactor alocis ATCC 35896]
gi|291166758|gb|EFE28804.1| ATP-dependent chaperone protein ClpB [Filifactor alocis ATCC 35896]
Length = 859
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/864 (50%), Positives = 611/864 (70%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ K+T K+ + I A +A G+ + T LHL AL++D + A+ + +
Sbjct: 1 MDAQKYTQKSLQMIQDAQNIAIKNGNPEITDLHLHKALVTDSDSLIARVLQEMNVD--IN 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
++A+ LP Q A P + +++ +A KA GD++++V+ L L L+ +
Sbjct: 59 QYRMTVDRAVDNLPRQQGASQVYP-NAVFQRILLKADDEAKALGDSYISVEHLYLSLISE 117
Query: 121 SQIGD--LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+I + + G+ + S + ++RG R+V S + + T L+ YG+DL ++A G
Sbjct: 118 RKIPSEHIIHQYGITGKKFSSVLNEIRG--SRRVTSDNPEETEDVLEKYGKDLTKEAREG 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K DP+IGRD+EIR V+RILSRR+KNNPVLIG+PGVGKTA+VEGLAQRIV GDVP L DV
Sbjct: 176 KSDPIIGRDDEIRNVIRILSRRSKNNPVLIGDPGVGKTAIVEGLAQRIVNGDVPDGLKDV 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMG L+AGAK+RGEFEERLKAVLKEV++++GK+I+FIDE+HL++GAG+T+G+MDA
Sbjct: 236 MIFSLDMGQLIAGAKFRGEFEERLKAVLKEVQKSDGKIIMFIDELHLIVGAGKTDGAMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP L+RG++R IGATTL+EYR+YVEKD A ERRFQ+V V+EPSV DTVSILRG+KE
Sbjct: 296 SNLMKPALSRGEIRMIGATTLKEYREYVEKDGALERRFQKVMVSEPSVEDTVSILRGIKE 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH +RI D A++ A LS RYIT R LPDKAIDL+DEA A VR +LDS P+E+D+
Sbjct: 356 KYELHHKLRISDNAIIACATLSDRYITDRFLPDKAIDLMDEASAMVRTELDSMPQELDDD 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
R+ +QLEIE AL+KE D+ SK RL + +EL +L ++ + ++ K+ +++ +
Sbjct: 416 RRRILQLEIEKAALKKETDEGSKKRLEGLEEELANLNERYNEEFINWQNSKKSLEKQTEI 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K E + +++A+R YD +A++LRYG +QE+E + + E S+E E V +Q
Sbjct: 476 KSAIELVKHQIEDAQRNYDYEKASELRYGKLQELEHELAENERKMSEEEDAAREEVTEEQ 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
IAEVVS+WTGIPV++L + E+E R+IG +A+ AV+E+++R+R+GL
Sbjct: 536 IAEVVSKWTGIPVSKLVETEREKILHLSDILSKRVIGQKDAITAVSEAIIRARSGLKDEN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTELAK L E +FDDE +VRIDMSEYME++SVSRLIG+ PGY+G
Sbjct: 596 RPIGSFIFLGPTGVGKTELAKTLTESMFDDERNMVRIDMSEYMEKYSVSRLIGSAPGYIG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGGQLTEAVRR+PYSVVLFDE+EKAH +FN LLQVLDDGRLTD QGRTVDF+NT+II
Sbjct: 656 YEEGGQLTEAVRRKPYSVVLFDEIEKAHPDIFNILLQVLDDGRLTDNQGRTVDFKNTIII 715
Query: 706 MTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
MTSNLG++ +L G+ + + R+ V ++ FRPE LNR+DEI++F PL+ E++ +
Sbjct: 716 MTSNLGSQAILDGIDDDGMLKESVRESVEDKLHHTFRPEFLNRIDEIILFTPLNKEEVYR 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ LQ+ + +LA+R + L + + A D +L +SY P +GARP+RR+++K + TEL+R L
Sbjct: 776 IIDLQVAKLQEKLADRNIVLQLDEKAKDTILQQSYSPQFGARPVRRFIQKNLETELARKL 835
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ I +N V I + G+NL Y
Sbjct: 836 IEGSISDNDEVLITGN--GENLSY 857
>gi|269836474|ref|YP_003318702.1| ATP-dependent chaperone ClpB [Sphaerobacter thermophilus DSM 20745]
gi|269785737|gb|ACZ37880.1| ATP-dependent chaperone ClpB [Sphaerobacter thermophilus DSM 20745]
Length = 870
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/865 (53%), Positives = 611/865 (70%), Gaps = 32/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN + T K EA+ A AQ L AL+S G+ Q + G ++ A
Sbjct: 1 MNLSRLTEKAQEALITAQRETEERRLAQLDVEPLLYALVSQRDGVVPQVLLRLGIDSRAA 60
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
AE + ++ P+ Q A + A L +V+ RA+ +A GD +++ + L+L LE
Sbjct: 61 QAE--LLRTVEASPTLQYSAQPVLGAG--LRRVLERAEQEARAFGDEYISTEHLLLAALE 116
Query: 120 DSQIGDLFK---EAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ K GV RV + ++RG ++V + + T+QAL+ YGRDL + A
Sbjct: 117 ATPNAPAVKALQRLGVNRDRVLMALSQIRG--AQRVTGTNPEDTYQALEKYGRDLTDLAR 174
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP L
Sbjct: 175 KGKLDPVIGRDEEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPEGLK 234
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D R++ LD+ A++AGAKYRGEFEERLKA L E++EAEG++I+FIDE+H V+GAG EG+M
Sbjct: 235 DKRIVQLDLAAMLAGAKYRGEFEERLKATLNEIQEAEGQIIVFIDELHTVVGAGAAEGAM 294
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA+N+ KPMLARG+L IGATTL+EYRKY+EKDAA ERRFQ VYV EPSV DT+SILRGL
Sbjct: 295 DASNMLKPMLARGELHAIGATTLDEYRKYIEKDAALERRFQPVYVGEPSVEDTISILRGL 354
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
+E+YE HH VRI D ALV AA LS RYIT R+LPDKAIDLVDEA A +R+++ S P E+D
Sbjct: 355 RERYELHHKVRILDSALVAAAVLSHRYITNRYLPDKAIDLVDEAAARLRMEITSMPAELD 414
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L R+ MQLEIE AL KE+D ASK RL E+ +EL DLR++ Q L ++++E+E I I
Sbjct: 415 ELHRRIMQLEIEREALRKERDDASKQRLQELERELADLREQEQVLRSQWEQEREAIQRIS 474
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTE 530
LK++ E+ +++A+R D ARA++L+YG + ++++ L Q++ L L E
Sbjct: 475 ELKEQIEQTRHEIEQAQRAADYARASELQYGRLVELERKLKEEERHLAEVQTNGKL-LKE 533
Query: 531 TVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRA 579
V D IAEVVS+WTGIPV++L G+ EK +R++G EA+ AV+ ++ R+R+
Sbjct: 534 EVDADDIAEVVSKWTGIPVSKLVEGEIEKLVHMESRLHQRVVGQDEAIEAVSNAIRRARS 593
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P GSF+FLGPTGVGKTELA+ALAE LFDDE +VRIDMSEY E+H+V+RLIGA
Sbjct: 594 GLQDPNRPLGSFIFLGPTGVGKTELARALAEFLFDDERAMVRIDMSEYQERHTVARLIGA 653
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG++EGGQLTEA+RRRPY+VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF
Sbjct: 654 PPGYVGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPEVFNVLLQVLDDGRLTDGQGRTVDF 713
Query: 700 RNTVIIMTSNLGAEHL-LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
RNTVIIMTSNLG+ ++ +G G+ M R +V + +R HFRPE LNR+DEIV+F L+
Sbjct: 714 RNTVIIMTSNLGSAYIQAAGPQGEAEM---RRRVFEALRNHFRPEFLNRIDEIVIFHALT 770
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
E L + +Q++ VA RLA+R + L VT A + + YDP++GARP++R ++++++
Sbjct: 771 REHLAMIVDIQLRQVAERLADRNITLQVTQRAKEWLADRGYDPVFGARPLKRTIQRELLD 830
Query: 819 ELSRMLVREEIDENSTVYIDASPKG 843
L++ L+ +I E TV +D P G
Sbjct: 831 RLAKALLEGKIHEGDTVTVDVGPDG 855
>gi|217978067|ref|YP_002362214.1| ATP-dependent chaperone ClpB [Methylocella silvestris BL2]
gi|217503443|gb|ACK50852.1| ATP-dependent chaperone ClpB [Methylocella silvestris BL2]
Length = 864
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/859 (52%), Positives = 601/859 (69%), Gaps = 23/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + + A LA G+ QFTP HL LL D G+ A I+ AGG + +
Sbjct: 1 MNFEKYTERARGFVQSAQSLAMREGNQQFTPEHLLKVLLDDEQGLSAGLIDKAGGRS--R 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
A A+ KLP + ++ + TL ++ A+ + GD+++ V++L+L L
Sbjct: 59 DALTATELALAKLPKVEGSGAGQVYITPTLARLFDNAEKIAEKAGDSYVTVERLLLALAM 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
++S+ G + + AG + +E+LR +GR ++A+ + + ALK Y RDL E A
Sbjct: 119 EKNSEAGKILERAGATPQNLNKAIEELR--KGRTADNATAENAYDALKKYTRDLTEAARS 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLRD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L+ALDMG+L+AGAKYRGEFEERLK +L EV A G +ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLALDMGSLIAGAKYRGEFEERLKGILTEVTSAAGGIILFIDEMHTLVGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L C+GATTLEEYRK+VEKDAA RRFQ V+V+EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCVGATTLEEYRKHVEKDAALARRFQPVFVSEPTVADTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D A+V AA LS RYI R LPDKAIDL+DEA A +R+ +DS+PEE+D
Sbjct: 357 EKYELHHGVRITDAAIVAAATLSHRYIADRFLPDKAIDLIDEASARLRMAIDSKPEELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+R+ +QL+IE AL+KE D ASK RLV++ EL +L +K L R+ EK+++ ++
Sbjct: 417 FDRRIIQLKIEQEALKKETDSASKDRLVKLEGELAELEEKSAALTARWHAEKDKLGSEQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
K++ E L +A+RR + RA +L YG I E+E + ++E + +++ E V P+
Sbjct: 477 FKEQIEAARTELAQAQRRGEYQRAGELTYGVIPELERKLAEIESKRG--GVLVEEAVTPE 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTGIPV ++ + E+E+L +G EAV AV+ +V R+RAGL P
Sbjct: 535 HIAQVVSRWTGIPVDKMLEGEREKLLNMEHALAARVVGQEEAVKAVSTAVRRARAGLQDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALA LFDDEN L+RIDMSEYME+HSV+RLIGAPPGYV
Sbjct: 595 NRPIGSFMFLGPTGVGKTELTKALAAFLFDDENALLRIDMSEYMEKHSVARLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRN +I
Sbjct: 655 GYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNVLI 714
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L+ G+ + V +V+Q VR HFRPE LNR+DEI++F L + +
Sbjct: 715 IMTSNLGSEFLVLQKEGEDSNAV-HSEVMQVVRAHFRPEFLNRVDEIILFHRLRRQDMGA 773
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+K + L +R + L +T A D + + YDP YGARP++R ++K + L+ +
Sbjct: 774 IVDIQLKRLDRLLEDRKITLELTPQARDWLAEKGYDPAYGARPLKRVIQKALQDPLAEAI 833
Query: 825 VREEIDENSTVYIDASPKG 843
+ +I + V I A KG
Sbjct: 834 LSGKIHDGEHVRIGADEKG 852
>gi|312194122|ref|YP_004014183.1| ATP-dependent chaperone ClpB [Frankia sp. EuI1c]
gi|311225458|gb|ADP78313.1| ATP-dependent chaperone ClpB [Frankia sp. EuI1c]
Length = 875
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/869 (53%), Positives = 597/869 (68%), Gaps = 26/869 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNPD+ T ++ EA+A A AT G PLHL ALL+ P GI A A+ A G +
Sbjct: 1 MNPDRLTARSQEALASAISRATGDGSPLVDPLHLLTALLAQPEGI-ATALLTAAGTSVDA 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+R N A+ +LP T P S L+ V+ RA+ GD + +V+ L++ L E
Sbjct: 60 IRQRAEN-AVGRLPHATGTSVSPPQLSRQLVTVLDRAEREAGRLGDEYTSVEHLVIALAE 118
Query: 120 DS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ + G G R++ VE +RG R+V S + +++AL+ Y DL E+A G
Sbjct: 119 EGGEAGRTLTAGGATADRLRGAVETVRGG-ARRVTSRDPEGSYRALEKYSLDLTERARAG 177
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPV+GRD E+RRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLAQR+V GDVP +L
Sbjct: 178 KLDPVVGRDAEVRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRVVAGDVPESLRGR 237
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
R+++LD+G++VAG+K+RGEFEERL +VL E+ EAEG++I FIDE+H V+GAG EGSMDA
Sbjct: 238 RIVSLDLGSMVAGSKFRGEFEERLTSVLNEIREAEGQIITFIDELHTVVGAGAAEGSMDA 297
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR IGATTL+EYRK++EKD A ERRFQ V V EPSV DT+ ILRGLKE
Sbjct: 298 GNMLKPMLARGELRMIGATTLDEYRKHIEKDPALERRFQPVMVGEPSVEDTIGILRGLKE 357
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RY+T R LPDKAIDLVDEA + +R++LDS+P ID L
Sbjct: 358 RYEVHHGVRITDAALVAAATLSDRYVTARFLPDKAIDLVDEAASRLRMELDSRPVAIDAL 417
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE AL E D+ASKARL +R+EL D R++L L R+++EK+ I E++RL
Sbjct: 418 ERAVRRLEIEEMALSNESDEASKARLDRLRRELADKREELNGLTARWQREKDAIGEVQRL 477
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVE-----AAIGQLEGNQSDENLMLTET 531
++ ++ + AER DLARAA+LR+G I +E AA ML E
Sbjct: 478 NEELDQARRMTEIAERDLDLARAAELRHGTIPALEKRLAEAAAALGAKGGGAAEPMLNEE 537
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAG 580
VGPD +AEVV+ WTGIP RL + E R+IG EAV AV+++V R+RAG
Sbjct: 538 VGPDDVAEVVATWTGIPAGRLLEGETAKLLRMEDELHTRVIGQDEAVRAVSDAVRRARAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEY E+HSV+RLIGAP
Sbjct: 598 IADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHSVARLIGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG E GGQLTEAVRRRPYSV+L DEVEKAH VF+ LLQVLDDGRLTDGQGRTVDFR
Sbjct: 658 PGYVGFESGGQLTEAVRRRPYSVILLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFR 717
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT++IMTSNLG++++ + + Q A V +R+ F+PE +NRLD V+F L E
Sbjct: 718 NTILIMTSNLGSQYIADPTL---SAQAAASMVQGAMREAFKPEFINRLDGYVIFSQLDKE 774
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
L ++ LQ+ + RLA+R + LAVT+AA + + DPIYGARP+RR ++ V +L
Sbjct: 775 NLTRIVDLQLDRLRQRLADRRITLAVTEAAKSWLADKGNDPIYGARPLRRLVQTAVGDQL 834
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYR 849
+R L+ ++ + V +D LV R
Sbjct: 835 ARELLSGQVHDGDEVAVDVGADESGLVVR 863
>gi|90425750|ref|YP_534120.1| ATPase [Rhodopseudomonas palustris BisB18]
gi|90107764|gb|ABD89801.1| ATPase AAA-2 [Rhodopseudomonas palustris BisB18]
Length = 879
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/864 (52%), Positives = 607/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A LA GH QF+PLH+ LL D G+ I+ +GG ++
Sbjct: 1 MNIEKYTERVRGFIQSAQSLAVREGHQQFSPLHILKVLLDDSEGLAGGLIDRSGGN--SR 58
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ + A+ K+P + A ++ + + A+ A GD+ + V++L+L L
Sbjct: 59 AILKATEDALNKMPKVSGAGAGQVYLAPDTARAFDAAEQAADKAGDSFVTVERLLLALAL 118
Query: 120 D--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D S+ G L K+ GV + + + LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 DRDSEAGALLKKGGVTPQNLNAAINALR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LD+GAL+AGAKYRGEFEERLKAVL EV AEG +ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLSLDLGALIAGAKYRGEFEERLKAVLSEVTSAEGGIILFIDEMHTLIGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ ++V+EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPIFVSEPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRIADSALVAATTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L+IE AL+KE D SK+RL + EL +L +K L R+ EK ++ ++
Sbjct: 417 MDREIIRLKIEQEALKKETDPGSKSRLQTLSGELAELEEKSAALTARWSAEKNKLSNAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L +A+RR + RA +L YG I E+E + ++E + + M+ E V +
Sbjct: 477 LKSELDGLRIELADAQRRGEYQRAGELAYGRIPELERRLAEIEAHAGNGE-MMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EK++L +G EAV+AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVEKMLEGEKDKLLRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LFDDE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPMGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
+MTSNLG+E L++ G+ T +V R+ V+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 VMTSNLGSEFLVNQPEGEDT-EVVREPVMAMVRAHFRPEFLNRVDEIILFHRLQKSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q +A L ER + L + +A D + + +DP YGARP++R +++ V L+ M+
Sbjct: 775 IVEIQFTRLAKLLEERKIVLELDASARDWLAEKGWDPAYGARPLKRVIQRHVQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ +I + V I S +G L +
Sbjct: 835 LAGDIKDGDRVAI--STEGGVLTF 856
>gi|427701446|ref|YP_007044668.1| ATP-dependent chaperone ClpB [Cyanobium gracile PCC 6307]
gi|427344614|gb|AFY27327.1| ATP-dependent chaperone ClpB [Cyanobium gracile PCC 6307]
Length = 877
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/858 (52%), Positives = 611/858 (71%), Gaps = 26/858 (3%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENA 58
M+P + FT K A+ + +LA Q HL ALL+ + ++ + AG +
Sbjct: 1 MHPTAELFTEKAWGAVVASQQLAQQRRQQQMDSEHLFAALLAQ-QDLASRILEKAGVDLG 59
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A S + + PS APD + L V+ RA+A +K D+++AV+ L+L L
Sbjct: 60 ALSQK--LEAFIAAQPSLATAPDNVYLGKGLNAVLDRAEALKKEFEDSYIAVEHLVLALA 117
Query: 119 EDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D + G L ++G +++ V +RG + +V + + T+++L+ YGRDL A
Sbjct: 118 GDDRCGRQLLSQSGADERKLREAVMAVRGSQ--RVTDQNPEGTYESLEKYGRDLTAAARE 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR V+ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP+ L +
Sbjct: 176 GKLDPVIGRDEEIRRTVQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPTALQN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LIALDMGAL+AGAKYRGEFEERLKAVLKEV +EG+++LFIDEIH V+GAG T G+MD
Sbjct: 236 RQLIALDMGALIAGAKYRGEFEERLKAVLKEVTSSEGQIVLFIDEIHTVVGAGATGGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KPMLARG+LRCIGATTL+E+R+++EKD A ERRFQQV+V +P+V DT+SILRGLK
Sbjct: 296 ASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVFVDQPTVEDTISILRGLK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV AA LS+RYI R LPDKAIDL+DE+ A +++++ S+PEEID
Sbjct: 356 ERYEVHHGVRIADNALVAAAVLSSRYIADRFLPDKAIDLMDESAARLKMEITSKPEEIDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QLE+E +L +E D AS+ RL ++ KEL DL ++ L +++KEK IDE+
Sbjct: 416 LDRRILQLEMEKLSLGRESDPASRDRLEKLEKELADLAEQQSSLNAQWQKEKGSIDELSA 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI----GQLEGNQSDENLMLTET 531
+K++ E++ +++A+R YDL +AA+L YG + E+ + +L + ++NL L E
Sbjct: 476 IKEEIEQVQLQVEQAKRNYDLNKAAELEYGTLAELNKKLAAKEAELSAHAGEKNL-LREE 534
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V D IAEV+++WTGIPV++L Q+E E+L IG +AV AVA+++ RSRAG
Sbjct: 535 VTEDDIAEVIAKWTGIPVSKLVQSEMEKLLHLEDELHTRVIGQEQAVTAVADAIQRSRAG 594
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P SFLFLGPTGVGKTEL+KALA QLFD E +VRIDMSEYME+H+VSRLIGAP
Sbjct: 595 LSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSEEAMVRIDMSEYMEKHAVSRLIGAP 654
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTVDF
Sbjct: 655 PGYVGYEEGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFT 714
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NTV+I+TSN+G+ +L +V + +R HFRPE LNRLDE ++F L E
Sbjct: 715 NTVLILTSNIGSASILDLAGDPARHGEMEKRVNEALRGHFRPEFLNRLDESIIFHSLKAE 774
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+LR++ LQ++ +A RL ER +AL V ALD + A YDP+YGARP++R +++++ T +
Sbjct: 775 ELRQIVELQVQRLARRLEERKLALQVDGEALDWLAAVGYDPVYGARPLKRAIQRELETPI 834
Query: 821 SRMLVREEIDENSTVYID 838
++ ++ ST+ +D
Sbjct: 835 AKAILAGTFPAGSTIAVD 852
>gi|423404202|ref|ZP_17381375.1| chaperone ClpB [Bacillus cereus BAG2X1-2]
gi|423475167|ref|ZP_17451882.1| chaperone ClpB [Bacillus cereus BAG6X1-1]
gi|401647409|gb|EJS65018.1| chaperone ClpB [Bacillus cereus BAG2X1-2]
gi|402436849|gb|EJV68876.1| chaperone ClpB [Bacillus cereus BAG6X1-1]
Length = 866
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/874 (51%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTIHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPA---STTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I L + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLLTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEADGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAREFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|353240126|emb|CCA72009.1| probable heat shock protein HSP104 (endopeptidase Clp ATP-binding
chain HSP104) [Piriformospora indica DSM 11827]
Length = 901
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/871 (51%), Positives = 592/871 (67%), Gaps = 40/871 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGI--------------- 45
MN D FT K+ + +A A +LA H+Q P+H A A+L++ +G+
Sbjct: 1 MNYD-FTEKSEQTLAAAIQLAKDHAHSQVQPVHFASAMLNEDAGLSPPGALPKPAGQGGS 59
Query: 46 -FAQAINNAGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHG 104
F QAI AGG+ + R + + +LPSQ P P+EI S KV+ AQ+ QK
Sbjct: 60 LFVQAIQKAGGDQTLVA--RAIQRQLVRLPSQDPPPEEISLSQASRKVLHEAQSLQKTMH 117
Query: 105 DTHLAVDQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQAL 164
D+++A D L+L L++D I KEA + +K+ +++LRG R+VES S + F AL
Sbjct: 118 DSYIAQDHLLLALIKDPTIVQALKEASITEGVIKTVIQQLRGN--RRVESKSAEQGFDAL 175
Query: 165 KTYGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQ 222
Y DL A GKLDPVIGRD EIRRV+RIL RRTKNNPVLIGEPG GKTA+ EGLAQ
Sbjct: 176 SKYATDLTALAEEGKLDPVIGRDNEIRRVIRILCRRTKNNPVLIGEPGTGKTAIAEGLAQ 235
Query: 223 RIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEA--EGK-VILFID 279
RI R DVP++L RL +LDMGAL+AGAKY+GE+EER+K+VL EVE+A EG VILFID
Sbjct: 236 RIARRDVPASLMG-RLFSLDMGALMAGAKYKGEYEERVKSVLNEVEKASEEGAGVILFID 294
Query: 280 EIHLVL-GAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVY 338
E+HL++ G G G MDAANL KP LARG++R IGATTL EY KY+EKDAAFERRF QV
Sbjct: 295 ELHLIMAGKGAEGGGMDAANLLKPQLARGKIRVIGATTLAEYSKYIEKDAAFERRFAQVL 354
Query: 339 VAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEA 398
V EPSVPDT+SILRG++EKYE HHGVRI D ALV AA L+ RY+T R LPD AIDLVDE
Sbjct: 355 VNEPSVPDTISILRGIREKYEVHHGVRILDSALVAAATLAHRYLTSRRLPDSAIDLVDEC 414
Query: 399 CANVRVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQP 458
CA+VRV ++ PE ID LERKR++LE+E+HALE+EKD +SK RL RKE+ ++ DKLQP
Sbjct: 415 CASVRVTRETAPEAIDQLERKRLELEVEIHALEREKDSSSKERLAAARKEVANIDDKLQP 474
Query: 459 LMMRYKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE 518
L +Y+ EK+R DEI ++++ +EL +AERRYDLA A+DLRY AI E++ + +
Sbjct: 475 LKAQYETEKKRSDEINEIRKRIDELKAKADDAERRYDLATASDLRYYAIPELQGRLEKAM 534
Query: 519 GNQSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAV 567
++ L +TV P+ IAEVV+RWTGIPVTRL E+E+L +G EAV
Sbjct: 535 AEEAAHGGSLADTVAPEAIAEVVARWTGIPVTRLMSTEREKLLRLEKTLAESVVGQPEAV 594
Query: 568 NAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEY 627
AVA ++ SR+GL +P SFLF GP+G GKT L+K LA+ LFD + + RID SEY
Sbjct: 595 KAVANAIRLSRSGLRNENRPLASFLFAGPSGTGKTLLSKTLAQSLFDSPDAMCRIDGSEY 654
Query: 628 MEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDG 687
E+HS+SRLIGAPPGYVGH++GGQLTE +RR+PYSV+L DE+EKA LQVLDDG
Sbjct: 655 SEKHSISRLIGAPPGYVGHDQGGQLTEYIRRKPYSVILVDELEKASREFVTVFLQVLDDG 714
Query: 688 RLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNR 747
RLTDGQGR VDFRNTVII TSN+G+ L G V + R V+ +R + PE LNR
Sbjct: 715 RLTDGQGRVVDFRNTVIIFTSNVGSTFLTDMGEGPVPSPI-RKAVMDAIRTTWPPEFLNR 773
Query: 748 LDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARP 807
+D I+++ LSH +RK+ +++ +V R+ R + L+V+D A + + Y YGARP
Sbjct: 774 IDNIIIYRALSHSNIRKIVDIRLGEVQQRIEGRKMKLSVSDEAKHYLASIGYSATYGARP 833
Query: 808 IRRWLEKKVVTELSRMLVREEIDENSTVYID 838
++R + +++ LS ++ + + + TV +D
Sbjct: 834 LQRAIMTELLNPLSVYILDDRVRDGETVRVD 864
>gi|86609958|ref|YP_478720.1| ATP-dependent chaperone protein ClpB [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558500|gb|ABD03457.1| ATP-dependent chaperone protein ClpB [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 880
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/869 (51%), Positives = 625/869 (71%), Gaps = 31/869 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K AI + ++A Q HL ++LL G+ + AG +
Sbjct: 5 NPNQFTEKAWSAIVQSQDVARRHQQQQLETEHLLISLLDQEGGLTQTLLQRAGIDP---- 60
Query: 62 AERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
++ ++ +Q P D++ L + RA+ +K +GD ++V+ L LG L
Sbjct: 61 --KLVRDKVESFINQQPKLARVDQLYLGRGLETTLDRAEEFRKEYGDDFISVEHLFLGSL 118
Query: 119 EDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D ++G + G+ V R+K ++++RGK+ +V + ++ ++AL+ YGRDL + A
Sbjct: 119 QDERVGKRVLAPLGLTVERLKPVIKEVRGKQ--RVTDKNPESRYEALERYGRDLTQAARE 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRI RGDVP +L +
Sbjct: 177 GKLDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRINRGDVPESLKN 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
R+IALDMGAL+AGAKYRGEFE+RLKAVLKEV E+EG++ILFIDE+H V+GAG EG+MD
Sbjct: 237 RRVIALDMGALIAGAKYRGEFEDRLKAVLKEVTESEGQIILFIDELHTVVGAGAGEGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+LRCIGATTL+EYRK++EKDAA ERRFQ VYV +PSV DT+SILRGLK
Sbjct: 297 AGNLLKPMLARGELRCIGATTLDEYRKHIEKDAALERRFQPVYVDQPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+P E+D
Sbjct: 357 ERYELHHGVKISDSALVAAAVLSNRYISERFLPDKAIDLVDEAAAKLKMEITSKPVELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ MQL++E +L+KE D AS+ RL ++ +EL +L ++ + L R++ EKE I+ ++
Sbjct: 417 IDRRIMQLQMEELSLKKEDDAASRDRLSKIEQELANLTERQRELNARWQFEKEAIERLQS 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTET 531
LK +R+ + +++AE++YDL RAA+L+YG + E+E I + E + Q++ +L E
Sbjct: 477 LKAERDAVKLQIEQAEQKYDLNRAAELKYGKLMELERQIQEQEAHLAKLQTNGEPLLREQ 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAG 580
V P+ IAE+VSRWTGIPVT L ++EK +R++G EAV AVA ++ R+RAG
Sbjct: 537 VTPEDIAEIVSRWTGIPVTSLMESEKQKLLRLEAHLHQRVVGQDEAVAAVAAAIRRARAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P +P GSFLF+GPTGVGKTELA+ALAE LFD +VRIDMSEYME+HSVSRLIGAP
Sbjct: 597 MKDPNRPIGSFLFMGPTGVGKTELARALAEFLFDTSEAMVRIDMSEYMEKHSVSRLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQL+EAVRRRPYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+
Sbjct: 657 PGYVGYEEGGQLSEAVRRRPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSN+G++ +L + + + QVL +R HFRPE LNR+DE+++F L+ E
Sbjct: 717 NTIIIMTSNIGSDLILEIGADESRYEEMKTQVLAMLRHHFRPEFLNRVDELIIFHALTKE 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q+R++ LQM+ V LA++ + + +T+ A D + YDP++GARP++R +++++ +
Sbjct: 777 QIRQIVGLQMQRVEKLLADQQIEILLTEEAKDYLAEVGYDPVFGARPLKRVIQREIENPI 836
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYR 849
+ L+ E + +D + + L++R
Sbjct: 837 ATKLLENEFLPGDRILVDVA--NERLIFR 863
>gi|182626453|ref|ZP_02954205.1| clpB protein [Clostridium perfringens D str. JGS1721]
gi|177908250|gb|EDT70808.1| clpB protein [Clostridium perfringens D str. JGS1721]
Length = 866
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/860 (50%), Positives = 606/860 (70%), Gaps = 25/860 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK T + +++ A+E+A + Q +HL AL++ G+ G
Sbjct: 1 MNADKMTLRVQQSLNDAYEIAVKYNNQQLDIIHLFSALVNQKDGLIPNIFEKMGVN--ID 58
Query: 61 SAERVFNQAMKKLP---SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S +R + + ++P + + A+ + +V+ +A+ K D++++V+ ++L +
Sbjct: 59 SLKRDIHVQIDRMPKVLGEAAQSSGVTATRRINEVLIKAEEISKQFEDSYISVEHVMLAM 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE- 173
++ + +G++ ++ + + ++RG + +V+S + T++AL YG +L+E
Sbjct: 119 IDIDKNGAVGEILRKNNITKDGFLKVLNEVRGSQ--RVDSQDPEGTYEALDKYGTNLIEL 176
Query: 174 -QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
+ KLDPVIGRDEEIRR VRILSR+TKNNP+LIGEPGVGKTA+VEGLA+RIVRGDVP
Sbjct: 177 VKQHKLDPVIGRDEEIRRAVRILSRKTKNNPILIGEPGVGKTAIVEGLAERIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D +I+LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EGK++LFIDEIH ++GAG+T+G
Sbjct: 237 LKDKVIISLDMGALIAGAKYRGEFEERLKAVLKEVQSSEGKILLFIDEIHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V V EP+V +TVSILR
Sbjct: 297 AMDAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVIVEEPTVEETVSILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHG+RI D A+V AA+LS RYI R+LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLKERFEIHHGIRIHDSAIVAAAKLSHRYIQDRYLPDKAIDLIDEAGAMIRSEIDSLPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK + LE E AL KE D ASK RLV + KEL +L+DK + ++Y+KEK I
Sbjct: 417 LDIIRRKILMLETEKEALSKENDDASKERLVALEKELAELQDKNDEMTIKYEKEKSHISA 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTE 530
+R LK + +E ++ ER YDL + A+L+YG I E+E I + E + + +EN +L E
Sbjct: 477 VRDLKAELDEARGLAEKYEREYDLNKVAELKYGKIPELERKIKEQEASMEKDNENALLKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRA 579
V ++I+E++S+WTGIPVT+L ++ +ER+IG EA AVA +V+R+RA
Sbjct: 537 EVTENEISEIISKWTGIPVTKLVESEREKLLRLEEELRERVIGQDEATTAVANAVIRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL ++P GSF+FLGPTGVGKTELAK LA LFD E+ +VRIDMSEYME+H+VSRLIG
Sbjct: 597 GLKDERKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIVRIDMSEYMEKHAVSRLIGP 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHDDVFNLFLQILDDGRLTDNKGKTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+N +IIMTSN+G+ +LL G+ R+ V+ E++ F+PE LNR+D+I++F PLS
Sbjct: 717 KNNIIIMTSNIGSGYLLENKSGEGIEDDIRENVMNEMKLRFKPEFLNRVDDIIMFRPLSS 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E ++K+ + ++DV RL ER + L VTD A +I+ E YDP+YGARP++R++ + TE
Sbjct: 777 EGIKKIIDIFLRDVENRLRERNITLEVTDGAKEILAEEGYDPVYGARPLKRYISNVLETE 836
Query: 820 LSRMLVREEIDENSTVYIDA 839
+++ ++ EI + S ID
Sbjct: 837 IAKKIIAGEIYDGSVALIDG 856
>gi|423420779|ref|ZP_17397868.1| chaperone ClpB [Bacillus cereus BAG3X2-1]
gi|401100489|gb|EJQ08483.1| chaperone ClpB [Bacillus cereus BAG3X2-1]
Length = 866
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/874 (51%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++++ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLQDDYISIEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKVLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLKEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|373118182|ref|ZP_09532317.1| ATP-dependent chaperone ClpB [Lachnospiraceae bacterium 7_1_58FAA]
gi|371667596|gb|EHO32717.1| ATP-dependent chaperone ClpB [Lachnospiraceae bacterium 7_1_58FAA]
Length = 876
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/865 (52%), Positives = 613/865 (70%), Gaps = 35/865 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG----GE 56
MN K+T K+ EA+ A +AT G+ Q HL +ALL D G+ Q + N G
Sbjct: 1 MNAQKYTQKSLEAVQNAQSIATEYGNQQIEQPHLLLALLLDEGGLIPQLLGNMGLTVPSF 60
Query: 57 NAAQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQL 113
AA AE ++KLP + + E I + + K + A++ + D +++V+ L
Sbjct: 61 TAAAKAE------VEKLPRVSGSGREQGKIYVAQDVDKCLNTAESIAASMKDEYVSVEHL 114
Query: 114 ILGLLE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL 171
+L LL+ + ++ +LF+ V V + +RG + +V S + + T+ ALK YG DL
Sbjct: 115 LLALLDTANRELKELFRTYNVQKEGVLQALTNVRGNQ--RVTSDNPEETYNALKKYGSDL 172
Query: 172 VEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDV 229
VE+A KLDPVIGRD+EIR V+RILSR++KNNPVLIGEPGVGKTA+ EGLAQRIV+GDV
Sbjct: 173 VERARANKLDPVIGRDDEIRNVIRILSRKSKNNPVLIGEPGVGKTAIAEGLAQRIVKGDV 232
Query: 230 PSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGR 289
P++L D + ALDMG+L+AGAKYRGEFEERLKAVL EV+++EG++ILFIDE+H ++GAG+
Sbjct: 233 PASLKDKTIFALDMGSLIAGAKYRGEFEERLKAVLNEVKKSEGRIILFIDELHTIVGAGK 292
Query: 290 TEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVS 349
TEG+MDA NL KP+LARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V+EP+V DT++
Sbjct: 293 TEGAMDAGNLLKPLLARGELHCIGATTLNEYRQYIEKDAALERRFQPVMVSEPTVEDTIA 352
Query: 350 ILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQ 409
ILRGLKE+YE +HGV+IQD A++ AA LS RYIT R LPDKAIDL+DEACA +R ++DS
Sbjct: 353 ILRGLKERYEVYHGVKIQDGAIIAAATLSNRYITDRFLPDKAIDLIDEACAMIRTEIDSM 412
Query: 410 PEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKER 469
P E+D ++RK +Q EIE AL+KE D S+ L E++KEL ++RD+ +++ EK
Sbjct: 413 PTELDVIQRKIIQHEIEEAALKKEDDALSREHLAEIQKELAEMRDEFNAKKAQWENEKNA 472
Query: 470 IDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLM 527
I ++++L+++ E L+ A+R+YDL RAA+L+YG I E+ + E N+ +
Sbjct: 473 IGKVQKLREELESANAELEAAQRQYDLNRAAELQYGRIPELRKQLEAEEAIANEGKARSL 532
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLR 576
L + V ++IA ++ RWTGIPV +L + E+E+L +G EAV V+E++LR
Sbjct: 533 LRDKVTEEEIARIIERWTGIPVAKLMEGEREKLLHLEDILHQRVVGQDEAVRLVSEAILR 592
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
SRAG+ P +P GSFLFLGPTGVGKTELAKALAE LFD E LVRIDMSEYME+ SVSRL
Sbjct: 593 SRAGIADPDRPIGSFLFLGPTGVGKTELAKALAEALFDSEKNLVRIDMSEYMEKFSVSRL 652
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
IGAPPGYVG+EEGGQLTEAVRR PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRT
Sbjct: 653 IGAPPGYVGYEEGGQLTEAVRRHPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRT 712
Query: 697 VDFRNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVF 754
VDF+NT+II+TSNLG+++LL G+ G +T + A++ V + FRPE LNRLDEIV +
Sbjct: 713 VDFKNTIIILTSNLGSQYLLDGIDKKGDITAE-AKNAVNDLLHHSFRPEFLNRLDEIVFY 771
Query: 755 DPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEK 814
PL+ + + + L + ++ RL ++ + +A+T AA ++ +YDP +GARP+RR+++
Sbjct: 772 KPLTKDNITHIIDLLVAELNRRLEDKQLKVALTPAAKQHIIDSAYDPAFGARPLRRFVQH 831
Query: 815 KVVTELSRMLVREEIDENSTVYIDA 839
V T +SR ++ +E+ T+ +D
Sbjct: 832 SVETLISRKIIADEVQGGDTLTVDC 856
>gi|169347218|ref|ZP_02866157.1| clpB protein [Clostridium perfringens C str. JGS1495]
gi|169296614|gb|EDS78745.1| clpB protein [Clostridium perfringens C str. JGS1495]
Length = 866
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/860 (50%), Positives = 606/860 (70%), Gaps = 25/860 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK T + +++ A+E+A + Q +HL AL++ G+ G
Sbjct: 1 MNADKMTLRVQQSLNDAYEIAVKYNNQQLDIIHLFSALVNQKDGLIPNIFEKMGVN--ID 58
Query: 61 SAERVFNQAMKKLPS---QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S +R + + ++P + + A+ + +V+ +A+ K D++++V+ ++L +
Sbjct: 59 SLKRDIHVQIDRMPKVLGEAAQSSGVTATRRINEVLIKAEEISKQFEDSYISVEHVMLAM 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE- 173
++ + +G++ ++ + + ++RG + +V+S + T++AL YG +L+E
Sbjct: 119 IDIDKNGAVGEILRKNNITKDGFLKVLSEVRGSQ--RVDSQDPEGTYEALDKYGTNLIEL 176
Query: 174 -QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
+ KLDPVIGRDEEIRR VRILSR+TKNNP+LIGEPGVGKTA+VEGLA+RIVRGDVP
Sbjct: 177 VKQHKLDPVIGRDEEIRRAVRILSRKTKNNPILIGEPGVGKTAIVEGLAERIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D +I+LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EGK++LFIDEIH ++GAG+T+G
Sbjct: 237 LKDKVIISLDMGALIAGAKYRGEFEERLKAVLKEVQSSEGKILLFIDEIHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V V EP+V +TVSILR
Sbjct: 297 AMDAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVIVEEPTVEETVSILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHG+RI D A+V AA+LS RYI R+LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLKERFEIHHGIRIHDSAIVAAAKLSHRYIQDRYLPDKAIDLIDEAGAMIRSEIDSLPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK + LE E AL KE D ASK RLV + KEL +L+DK + ++Y+KEK I
Sbjct: 417 LDIIRRKILMLETEKEALSKENDDASKERLVALEKELAELQDKNDEMTIKYEKEKSHISA 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTE 530
+R LK + +E ++ ER YDL + A+L+YG I E+E I + E + + +EN +L E
Sbjct: 477 VRDLKAELDEARGLAEKYEREYDLNKVAELKYGKIPELERKIKEQEASMEKDNENALLKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRA 579
V ++I+E++S+WTGIPVT+L ++ +ER+IG EA AVA +V+R+RA
Sbjct: 537 EVTENEISEIISKWTGIPVTKLVESEREKLLRLEEELRERVIGQDEATTAVANAVIRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL ++P GSF+FLGPTGVGKTELAK LA LFD E+ +VRIDMSEYME+H+VSRLIG
Sbjct: 597 GLKDERKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIVRIDMSEYMEKHAVSRLIGP 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHDDVFNLFLQILDDGRLTDNKGKTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSN+G+ +LL + R+ V+ E++ F+PE LNR+D+I++F PLS
Sbjct: 717 KNTIIIMTSNIGSGYLLENKSSEGIEDDIRENVMNEMKLRFKPEFLNRVDDIIMFRPLSS 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E ++K+ + ++DV RL ER + L VTD A +I+ E YDP+YGARP++R++ + TE
Sbjct: 777 EGIKKIIDIFLRDVENRLRERNITLEVTDGAKEILAEEGYDPVYGARPLKRYISNVLETE 836
Query: 820 LSRMLVREEIDENSTVYIDA 839
+++ ++ EI + S ID
Sbjct: 837 IAKKIIAGEIYDGSVALIDG 856
>gi|16125131|ref|NP_419695.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Caulobacter
crescentus CB15]
gi|221233859|ref|YP_002516295.1| ClpB protein [Caulobacter crescentus NA1000]
gi|54035891|sp|Q9A9T4.1|CLPB_CAUCR RecName: Full=Chaperone protein ClpB
gi|13422139|gb|AAK22863.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Caulobacter
crescentus CB15]
gi|220963031|gb|ACL94387.1| ClpB protein [Caulobacter crescentus NA1000]
Length = 859
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/855 (52%), Positives = 599/855 (70%), Gaps = 29/855 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN D ++ + +A+ A LA + GH QF P H+ LL + G+ I +AGG
Sbjct: 1 MNIDLYSDRAKQAVQSAQSLALARGHQQFAPEHILKVLLEEKDGLSRALIQSAGGRPDQ- 59
Query: 61 SAERVFNQAMKKLPSQTPAPD----EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILG 116
+ ++ L ++TP D ++ +V A+ + KA GD + ++L++
Sbjct: 60 -----LDGGVETLLAKTPRVDGAGGQLYMKPDTARVFAEAEKSAKAAGDAFVTTERLLIA 114
Query: 117 LL-EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
+ E + LFKEAGV+ +++ +R +GR +SA+ + ++ALK Y RDL A
Sbjct: 115 IAKEGGEAAKLFKEAGVSAQSLETAANAMR--KGRTADSANAEEGYEALKRYARDLTAAA 172
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L
Sbjct: 173 RDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESL 232
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +L++LDMG+L+AGAKYRGEFEERLKAVL EV AEG +ILFIDE+H ++GAG+ +G+
Sbjct: 233 KDKKLLSLDMGSLIAGAKYRGEFEERLKAVLGEVTAAEGSIILFIDEMHTLVGAGKGDGA 292
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRG
Sbjct: 293 MDASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRG 352
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKEKYE HHGVRI D A+V AA LS RYI R LPDKAIDLVDEA + VR+Q+DS+PEE+
Sbjct: 353 LKEKYEVHHGVRISDSAIVAAATLSNRYIADRFLPDKAIDLVDEASSRVRMQIDSKPEEL 412
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D ++R+ +QL+IE AL KE D ASK RL + E+DDL+ + + R+K EKE++
Sbjct: 413 DEIDRRLVQLKIEREALSKETDAASKQRLENLEVEIDDLQFRSDEMTARWKAEKEKVGGA 472
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVG 533
+ ++ + L L A+R D ARA ++YG I +E + + E D + E V
Sbjct: 473 AQAREALDRLRADLANAQRAGDFARAGQIQYGEIPALERRLAEAEAG--DTQALTPEVVD 530
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
+QIA VVSRWTG+PV ++ + E+E+L +G EA+ AV+++V R+RAGL
Sbjct: 531 AEQIAAVVSRWTGVPVEKMLEGEREKLLKMEDELRGRVVGQDEALEAVSDAVRRARAGLQ 590
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTEL K+LAE LF DE + R+DMSEYME+HSVSRLIGAPPG
Sbjct: 591 DPSKPIGSFLFLGPTGVGKTELTKSLAEFLFADEAAITRMDMSEYMEKHSVSRLIGAPPG 650
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGG LTEA+RRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 651 YVGYDEGGALTEAIRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNT 710
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IIMTSNLGAE+L S G+ ++ R V+ VR HFRPE LNR+DEI++F LS +
Sbjct: 711 LIIMTSNLGAEYLASQEDGE-DVEAVRPMVMNTVRGHFRPEFLNRIDEIILFKRLSRHNM 769
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ R+Q++ V LA+R +ALA+ AL+ + + YDP+YGARP++R ++K++V +++
Sbjct: 770 GDIVRIQLQRVEKLLADRRMALALDAEALNWLADKGYDPVYGARPLKRVIQKELVDPIAK 829
Query: 823 MLVREEIDENSTVYI 837
L+ EI++ + +
Sbjct: 830 KLLAGEIEDGGVIAV 844
>gi|110798650|ref|YP_696119.1| clpB protein [Clostridium perfringens ATCC 13124]
gi|110673297|gb|ABG82284.1| clpB protein [Clostridium perfringens ATCC 13124]
Length = 866
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/860 (50%), Positives = 606/860 (70%), Gaps = 25/860 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK T + +++ A+E+A + Q +HL AL++ G+ G
Sbjct: 1 MNADKMTLRVQQSLNDAYEIAVKYNNQQLDIIHLFSALVNQKDGLIPNIFEKMGVN--ID 58
Query: 61 SAERVFNQAMKKLPS---QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S +R + + ++P + + A+ + +V+ +A+ K D++++V+ ++L +
Sbjct: 59 SLKRDIHVQIDRMPKVLGEAAQSSGVTATRRINEVLIKAEEISKQFEDSYISVEHVMLAM 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE- 173
++ + +G++ ++ + + ++RG + +V+S + T++AL YG +L+E
Sbjct: 119 IDIDKNGAVGEILRKNNITKDGFLKVLNEVRGSQ--RVDSQDPEGTYEALDKYGTNLIEL 176
Query: 174 -QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
+ KLDPVIGRDEEIRR VRILSR+TKNNP+LIGEPGVGKTA+VEGLA+RIVRGDVP
Sbjct: 177 VKQHKLDPVIGRDEEIRRAVRILSRKTKNNPILIGEPGVGKTAIVEGLAERIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D +I+LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EGK++LFIDEIH ++GAG+T+G
Sbjct: 237 LKDKVIISLDMGALIAGAKYRGEFEERLKAVLKEVQSSEGKILLFIDEIHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V V EP+V +TVSILR
Sbjct: 297 AMDAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVIVEEPTVEETVSILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHG+RI D A+V AA+LS RYI R+LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLKERFEIHHGIRIHDSAIVAAAKLSHRYIQDRYLPDKAIDLIDEAGAMIRSEIDSLPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK + LE E AL KE D ASK RLV + KEL +L+DK + ++Y+KEK I
Sbjct: 417 LDIIRRKILMLETEKEALSKENDDASKERLVALEKELAELQDKNDEMTIKYEKEKSHISA 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTE 530
+R LK + +E ++ ER YDL + A+L+YG I E+E I + E + + +EN +L E
Sbjct: 477 VRDLKAELDEARGLAEKYEREYDLNKVAELKYGKIPELERKIKEQEASMEKDNENALLKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRA 579
V ++I+E++S+WTGIPVT+L ++ +ER+IG EA AVA +V+R+RA
Sbjct: 537 EVTENEISEIISKWTGIPVTKLVESEREKLLRLEEELRERVIGQDEATTAVANAVIRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL ++P GSF+FLGPTGVGKTELAK LA LFD E+ +VRIDMSEYME+H+VSRLIG
Sbjct: 597 GLKDERKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIVRIDMSEYMEKHAVSRLIGP 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHDDVFNLFLQILDDGRLTDNKGKTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSN+G+ +LL + R+ V+ E++ F+PE LNR+D+I++F PLS
Sbjct: 717 KNTIIIMTSNIGSGYLLENKSNEGIEDDIRENVMNEMKLRFKPEFLNRVDDIIMFRPLSS 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E ++K+ + ++DV RL ER + L VTD A +I+ E YDP+YGARP++R++ + TE
Sbjct: 777 EGIKKIIDIFLRDVENRLRERNITLEVTDGAKEILAEEGYDPVYGARPLKRYISNVLETE 836
Query: 820 LSRMLVREEIDENSTVYIDA 839
+++ ++ EI + S ID
Sbjct: 837 IAKKIIAGEIYDGSVALIDG 856
>gi|312127443|ref|YP_003992317.1| ATP-dependent chaperone clpb [Caldicellulosiruptor hydrothermalis
108]
gi|311777462|gb|ADQ06948.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor hydrothermalis
108]
Length = 864
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/879 (49%), Positives = 621/879 (70%), Gaps = 40/879 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN ++FT A+ A A H + HL AL+++ + A+ + N G + +
Sbjct: 1 MNMERFTQSLQTALLDAQNTAIVYKHQEIGAEHLHYALVNEDDKLVAKILKNMGID--IE 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+R + +KK+P P + + + +++ RA+ K D +++V+ + L ++
Sbjct: 59 LYKRDIEEQLKKIPMVYGPGASTVYVNRYVNEILIRAEEEAKKFKDEYISVEHVYLAMI- 117
Query: 120 DSQI---GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
DS I +F++ G+ + ++ K+RG + ++ + + + ++ LK YGRDL + A
Sbjct: 118 DSDIPSSKSIFRKYGITREKFLQQLYKIRGNQ--RITNPNPEEVYEVLKKYGRDLTDLAR 175
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L
Sbjct: 176 KGKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + ALD+GAL+AGAKYRGEFEERLKAVL E+ +EG++ILFIDEIH ++GAGR EG+M
Sbjct: 236 DKTIFALDLGALIAGAKYRGEFEERLKAVLNEIIASEGRIILFIDEIHNIVGAGRAEGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT++EYRKY+EKDAA ERRFQ V V PSV DT+SILRGL
Sbjct: 296 DAGNLLKPMLARGELHCIGATTIDEYRKYIEKDAALERRFQPVLVNPPSVEDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGVRI D AL+ AA+LS RYI+ R LPDKAIDL+DEA + +R ++DS P E+D
Sbjct: 356 KERFEIHHGVRITDNALIAAAKLSDRYISDRFLPDKAIDLIDEAASLLRTEIDSMPTELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQL IE + L+KE++ ++K R+ E+ KE+ L+ + L +++ EKE I E+R
Sbjct: 416 EITRKIMQLRIEKNVLQKEENTSAKQRIEEIEKEIAQLQSRADELSAQWEYEKELIKEVR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLMLTE 530
R+K++ E + ++EAER YDL R ++L+YG + E++ A+ +LE E +L E
Sbjct: 476 RIKEEIENVKIQIEEAERSYDLNRLSELKYGKLIELQKALDRKRQELE-KIPPEKRLLKE 534
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRA 579
V ++IA++VS+WTGIPV +L + E++ R++G EA+ AV +++R+RA
Sbjct: 535 EVTEEEIAKIVSKWTGIPVAKLVETERQKILELDKILHRRVVGQDEAIEAVCNAIMRARA 594
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P G+FLFLGPTGVGKTELA+ALAE LFD E+ ++RIDM+EYME+HSVSRLIGA
Sbjct: 595 GIKDPRKPIGTFLFLGPTGVGKTELARALAEALFDSESNMIRIDMTEYMEKHSVSRLIGA 654
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVR +PYSVVLFDE+EKAH VFN LLQ++DDGRLTD +GRTVDF
Sbjct: 655 PPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHHDVFNLLLQIMDDGRLTDSKGRTVDF 714
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NT+IIMTSNLG+E+LL+ + + + R + +E++ HFRPE LNRLDE+++F PL+
Sbjct: 715 KNTIIIMTSNLGSEYLLNAKISNGEIDEETRKLIDRELKLHFRPEFLNRLDEVIIFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
EQ+ K+ L++ ++ +L E+G+++ +T A + V+ ++D +GARPI+R+L+K V T
Sbjct: 775 KEQIIKIIDLRVAEIQQKLIEKGISIRLTQRAKEFVMENAFDVNFGARPIKRFLQKNVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFV 857
++R +++ I E ++ ID +NG FV
Sbjct: 835 LIAREILKGTIVEGDSIDIDV------------ENGKFV 861
>gi|119963675|ref|YP_947629.1| ATP-dependent chaperone protein ClpB [Arthrobacter aurescens TC1]
gi|119950534|gb|ABM09445.1| ATP-dependent chaperone protein ClpB [Arthrobacter aurescens TC1]
Length = 878
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/871 (52%), Positives = 605/871 (69%), Gaps = 31/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN + FT K+ EA+A A +A GH + HL ALL +G+ + + AG + +
Sbjct: 1 MNMESFTQKSQEALAGAQRIAQQHGHTETDGEHLLAALLEQEAGLVPRLL--AGMQIDVE 58
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
R ++K P T AP ++ S L ++ A+ K D +++V+ L++ L
Sbjct: 59 ELNRAVETELQKKPKVTGPGAAPGQVYVSRRLGTLLDAAEREAKRLKDEYVSVEHLLVAL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ S G + E G+ S + ++RG + +V SA+ + T++AL+ YGRDLV
Sbjct: 119 AEEGRASAAGRVLAEHGITREAFLSVLTQVRGNQ--RVTSATPEQTYEALEKYGRDLVAD 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRRVV+ILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP
Sbjct: 177 ARTGKLDPVIGRDSEIRRVVQILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRQDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L + + +LD+ ALVAGAKYRGEFEERLKAVL EV AEG+++LF+DE+H V+GAG +EG
Sbjct: 237 LKNKTIFSLDLSALVAGAKYRGEFEERLKAVLAEVLAAEGRILLFVDELHTVVGAGASEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA N+ KPMLARG+L IGATTL+EYRK++E DAA ERRFQ V V EP V D +SILR
Sbjct: 297 SMDAGNMLKPMLARGELHMIGATTLDEYRKHIESDAALERRFQPVTVEEPDVEDAISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E+ E HGVRIQD ALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 357 GLRERLEVFHGVRIQDSALVAAATLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D L RK +LEIE AL KE D ASK RL E+R+EL DLR + +++ E++ I +
Sbjct: 417 LDELTRKVTRLEIEDAALAKETDPASKTRLTELRRELADLRAEADAKRAQWEAERQAIHK 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLML 528
++ ++ + E +EAER YDL AA+LRYG + ++E + +L Q ++ L L
Sbjct: 477 LQEIRTELERARLEAEEAERNYDLNLAAELRYGRLADLERRLAAEEERLTAKQGEKRL-L 535
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRS 577
E V D+IA++V+ WTGIPV RL Q E+E R++G EA+ AV+++++R+
Sbjct: 536 REVVTEDEIADIVAAWTGIPVARLKQGEREKVLHLDEILRARVVGQEEAITAVSDAIIRA 595
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
R+G+ P++P GSF+FLGPTGVGKTELAKALA LFD EN ++R+DMSEY E+H+VSRL+
Sbjct: 596 RSGIRDPRRPIGSFIFLGPTGVGKTELAKALAASLFDSENAMIRLDMSEYQERHTVSRLL 655
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGY+G++EGGQLTEAVRR+PYSVVLFDEVEKAH +FNTLLQVLDDGR+TD QGRTV
Sbjct: 656 GAPPGYIGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDIFNTLLQVLDDGRITDSQGRTV 715
Query: 698 DFRNTVIIMTSNLGAEHLLSGMM-GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
DFRNTVIIMTSN+G+++LL G G + AR V+ E+R HFRPE LNR+D+ V+F P
Sbjct: 716 DFRNTVIIMTSNIGSQYLLEGSAEGGTITEEARGMVMGELRAHFRPEFLNRVDDTVLFAP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L Q+ ++ L + + RLAE+ + L +T+ A ++ +DP+YGARP+RR++ V
Sbjct: 776 LGLAQIERIVDLLFQQLRQRLAEQQIELHLTEQARLLIAERGFDPVYGARPLRRYISHVV 835
Query: 817 VTELSRMLVREEIDENSTVYIDASPKGDNLV 847
T++ R L+R I+E + + S G+ LV
Sbjct: 836 ETQVGRALLRGSIEEGGVITVTVS--GNELV 864
>gi|336437457|ref|ZP_08617163.1| chaperone ClpB [Lachnospiraceae bacterium 1_4_56FAA]
gi|336005583|gb|EGN35628.1| chaperone ClpB [Lachnospiraceae bacterium 1_4_56FAA]
Length = 861
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/856 (51%), Positives = 608/856 (71%), Gaps = 25/856 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + +A+ +LA G+ + HL AL++ + + + G +
Sbjct: 1 MNINKFTQNSLQAVQGCEKLAYDYGNQEIAQEHLLYALVTQNDSLILKLLEKMGYQGTL- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
RV + +KK P ++ L V+ A+ K GD +++V+ L L LL+
Sbjct: 60 VVNRV-EEMLKKRPKVQGG--QVYVGQDLNNVLIHAEDEAKQMGDEYVSVEHLFLALLKY 116
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
++ F+E G++ + +RG + +V S + + T+ L YG+DLVE+A
Sbjct: 117 ASREMKAFFQEMGISREGFLQALSSVRGNQ--RVTSDNPEATYDTLNKYGQDLVERARDQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVP L D
Sbjct: 175 KLDPVIGRDEEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPEGLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMGALVAGAKYRGEFEERLKAVL+EV+ ++GK+ILFIDE+H ++GAG+T+G+MDA
Sbjct: 235 TIFSLDMGALVAGAKYRGEFEERLKAVLEEVKNSDGKIILFIDELHTIVGAGKTDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V D +SILRGLKE
Sbjct: 295 GNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVEEPTVEDAISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D L
Sbjct: 355 RYEVFHGVKITDSALVAAAMLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELDEL 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
R+ MQLEIE AL+KE D+ S+ RLV +++EL LR++ ++ EK ++ ++++
Sbjct: 415 SRRIMQLEIEEEALKKEDDRLSQERLVHLQEELAGLREEYAGQKAQWDNEKSSVERVQKI 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+++ E++ +Q+A+R YDL RAA+L+YG + +++ + + E ++ + L E V +
Sbjct: 475 REQIEQVNKDIQKAQREYDLNRAAELQYGQLPQLKKQLEEEEERVKEKEMSLVHEAVTDE 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA ++SRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+ P
Sbjct: 535 EIARIISRWTGIPVAKLNESERNKTLHLAEELHKRVIGQDEGVELVTEAIIRSKAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALA LFDDEN +VRIDMSEYME++SVSRLIGAPPGYV
Sbjct: 595 TKPIGSFLFLGPTGVGKTELAKALAASLFDDENNMVRIDMSEYMEKYSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT++
Sbjct: 655 GYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTIL 714
Query: 705 IMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+GA +LL G+ G + Q ++ V+ E+R HFRPE LNRLDEI++F PL+ +
Sbjct: 715 IMTSNIGANYLLDGIEEDGSIDEQ-NQNMVMNELRAHFRPEFLNRLDEIIMFKPLTKSNI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L + DV RL E+ +++ +T+AA + V+ YDP+YGARP++R+L+K V T+ +R
Sbjct: 774 YAIIDLLVADVNKRLEEKELSIELTEAAKNYVVEGGYDPMYGARPLKRYLQKNVETQAAR 833
Query: 823 MLVREEIDENSTVYID 838
+++ ++ + ID
Sbjct: 834 LILAGDVGRGDCILID 849
>gi|227815982|ref|YP_002815991.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. CDC 684]
gi|227005521|gb|ACP15264.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
anthracis str. CDC 684]
Length = 866
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/874 (51%), Positives = 621/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT AI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQGAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +T+AA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVKLTEAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|92116299|ref|YP_576028.1| ATPase [Nitrobacter hamburgensis X14]
gi|91799193|gb|ABE61568.1| ATPase AAA-2 [Nitrobacter hamburgensis X14]
Length = 878
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/864 (52%), Positives = 604/864 (69%), Gaps = 25/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A LA GH QFTPLH+ LL D G+ I+ AGG ++
Sbjct: 1 MNIEKYTERVRGFIQSAQSLAVREGHQQFTPLHILKVLLDDSEGLAGSLIDRAGGN--SR 58
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGL 117
+ + A+ K+P + A +I + + A+ A + GD+ + V++L+ L L
Sbjct: 59 AILKATEAALNKMPKVSGAGAGQIYLAPATARAFDAAEQAAEKAGDSFVTVERLLQALSL 118
Query: 118 LEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+DS L K+ GV + + + LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 DKDSDAFKLLKDGGVTPQNLNAAINALR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L+ALD+G+L+AGAKYRGEFEERLKAVL+EV A G ++LFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLALDLGSLIAGAKYRGEFEERLKAVLQEVTSAAGGIVLFIDEMHTLIGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ ++V+EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPIFVSEPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRIADAALVAAATLSHRYITDRFLPDKAIDLVDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ ++L IE AL+KE D S+ RL + KEL DL + L R+ EK ++ + R
Sbjct: 417 LDREIVRLRIEQEALKKENDAGSRMRLENLEKELVDLEKQSADLTSRWNAEKGKLSDAAR 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + ++ L A+RR + +A +L YG I E+E + +E +S N M+ ETV D
Sbjct: 477 LKSELDQARIELANAQRRGEYQKAGELAYGRIPELEKRLESIEAGES--NTMMNETVTAD 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EKE+L +G +EAV AV+ +V R+RAGL P
Sbjct: 535 NIAQVVSRWTGVPVDKMLEGEKEKLLRMEESLAARVVGQSEAVRAVSTAVRRARAGLQDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALA LFD+E +VRIDMSEYME+HSV+RLIGAPPGYV
Sbjct: 595 NRPMGSFMFLGPTGVGKTELTKALAAYLFDNETAMVRIDMSEYMEKHSVARLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 655 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 714
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T V R+QV+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 715 IMTSNLGSEFLVNQPEGEDTGAV-REQVMGMVRAHFRPEFLNRVDEIILFHRLQKSEMGR 773
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L +R + L + AA D + + +DP YGARP++R +++ V L+ M+
Sbjct: 774 IVEIQFARLQKLLEDRKIVLDLDTAARDRLAEKGWDPAYGARPLKRVIQRTVQDPLAEMI 833
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ ++ + V I + KGD L +
Sbjct: 834 LAGKVHDGDHVAI--AVKGDALTF 855
>gi|297564892|ref|YP_003683864.1| ATP-dependent chaperone ClpB [Meiothermus silvanus DSM 9946]
gi|296849341|gb|ADH62356.1| ATP-dependent chaperone ClpB [Meiothermus silvanus DSM 9946]
Length = 855
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/864 (52%), Positives = 614/864 (71%), Gaps = 27/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN + +T + +A+A A LA H HLA LL DP G+ A+ + AGG +
Sbjct: 1 MNLEVWTEQARQALAQAQVLAREFSHQAIDVPHLAAVLLKDPQGLPARLVGRAGGNPS-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
S + + +LP + + S L V RA+A K GD +AVD L L L E
Sbjct: 59 SIYQAAQSELGRLPKVSGSEGGQYLSNRLNAVFDRAEAIAKELGDKFVAVDTLTLALAET 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
G +++ ++ ++++RG G+KV+SA+ + T+QAL+ YG DL A GKL
Sbjct: 119 GYAGL------PSISALRRAIQEIRG--GKKVDSANAEGTYQALEQYGLDLTALAEQGKL 170
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRR V+IL RRTKNNPVLIG+PGVGKTA+VEGLAQRIV+GDVP L R+
Sbjct: 171 DPVIGRDEEIRRTVQILLRRTKNNPVLIGDPGVGKTAIVEGLAQRIVKGDVPEGLKGKRI 230
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+L MG+L+AGAKYRGEFEER+KAV++E ++ G+VILF+DE+H V+GAG+ EG++DA N
Sbjct: 231 ISLQMGSLLAGAKYRGEFEERMKAVIQEAIQSAGEVILFVDELHTVVGAGKAEGAVDAGN 290
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
+ KP LARG+L IGATTL+EYR+ +EKDAA ERRFQ V+V EPSV DT+SILRG+KEKY
Sbjct: 291 MLKPALARGELHMIGATTLDEYRE-IEKDAALERRFQPVFVEEPSVEDTISILRGIKEKY 349
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D A+V AA LS RYI+ R LPDKAIDL+DEA A +R+ L+S PE+ID+LER
Sbjct: 350 EVHHGVRISDPAIVAAAVLSHRYISDRKLPDKAIDLIDEAAARIRMALESSPEQIDSLER 409
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K++QLEIE AL+KE D SKARL ++ E+ L +++ L ++ E+E + +R +Q
Sbjct: 410 KKLQLEIERQALKKETDLESKARLDDIEAEIASLNEEIGKLKTEWEAEREVLKSLREAQQ 469
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+ +E+ ++++AER YDL +AA+LRYG + +EA + +L + + E D IA
Sbjct: 470 RLDEVRTSIEQAERAYDLNKAAELRYGELPRLEARVKELSEQLRNAKFVRLEVTEED-IA 528
Query: 539 EVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQP 587
+VVSRWTGIPV +L + E+E+L +G EA+ AVA+++ R+RAGL P +P
Sbjct: 529 QVVSRWTGIPVAKLLEGEREKLLRLEEEMHKRVVGQDEAIVAVADAIRRARAGLKDPNRP 588
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
GSFLFLGPTGVGKTELAK LA QLFD E +VRIDMSEY E+H+V+RLIGAPPGYVG+E
Sbjct: 589 IGSFLFLGPTGVGKTELAKTLAAQLFDTEENMVRIDMSEYQEKHTVARLIGAPPGYVGYE 648
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTDGQGRTVDFRNTVII+T
Sbjct: 649 EGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRLTDGQGRTVDFRNTVIILT 708
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLG+ +L G+ + + R++V + ++K+FRPE LNRLDEIVVF PL+ EQ+ ++
Sbjct: 709 SNLGSPLILEGIQAGLPYETIRNRVFEVLQKNFRPEFLNRLDEIVVFKPLTQEQIAQIVE 768
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
+Q++ + RLAER + L ++ A + YDP++GARP++R +++++ T L++ ++
Sbjct: 769 IQLEGLRRRLAERRITLELSPEAKRFLAERGYDPVFGARPLKRVIQRELETPLAKKILAG 828
Query: 828 EIDENSTVYIDASPKGDNLVYRVQ 851
E+ + + + ++A P+G L + VQ
Sbjct: 829 EVQDGAYLRVNAGPQG--LSFEVQ 850
>gi|363893635|ref|ZP_09320730.1| ATP-dependent chaperone ClpB [Eubacteriaceae bacterium ACC19a]
gi|361963437|gb|EHL16509.1| ATP-dependent chaperone ClpB [Eubacteriaceae bacterium ACC19a]
Length = 862
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/871 (49%), Positives = 617/871 (70%), Gaps = 31/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
MN +K T K+ EA+ A A + + + +HL ALL +GI + ++ N +
Sbjct: 1 MNLEKLTQKSQEAVLQAQNTALNNSNQEIDSIHLLKALLEQDNGIIPKILSLMNINVSSL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAP-DEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ + N KLP + + + AS L +++ AQ K GD +++V+ L L +
Sbjct: 61 ISDVDDMVN----KLPKVSGSSISNVYASRKLSELLSNAQNESKNFGDEYVSVEHLFLAM 116
Query: 118 LED--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++ + I D+F + + +EK+RG ++V + + + T+ L+ YGRDLV+ A
Sbjct: 117 FKEKGTIISDIFSKFSIKRQDFMQRLEKIRG--NQRVTNENPEDTYNVLEKYGRDLVDMA 174
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGR++EIRR +RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRI++ DVP +L
Sbjct: 175 RNGKLDPVIGREDEIRRAIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKNDVPDSL 234
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + ALDMG+L+AGAKYRGEFEERLKA+LKE+E+++G++I+FIDEIH ++GAG+TEGS
Sbjct: 235 KDKTIFALDMGSLIAGAKYRGEFEERLKAILKEIEKSDGRIIMFIDEIHTIIGAGKTEGS 294
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATT++EYRKY+EKDAA ERRFQ + V +P+V DT+SILRG
Sbjct: 295 MDAGNLLKPMLARGELHCIGATTIDEYRKYIEKDAALERRFQPIMVDQPTVEDTISILRG 354
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
+KEK+E HHGVRI D A++ +A LS +YI R LPDKAIDL+DEA A +R Q+DS P ++
Sbjct: 355 IKEKFEIHHGVRISDSAIIASAVLSNKYINDRFLPDKAIDLMDEAAAMIRTQIDSMPTDL 414
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D++ RK MQLEIE AL+KE D+ SK RLV + +EL L+D + + E++ I ++
Sbjct: 415 DDMSRKIMQLEIEQQALKKETDEQSKKRLVVLEEELSKLKDDYKNKKATWDVERQSIGKV 474
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE--NLMLTET 531
+ L+++ E + + A+R YDL + L+YG + E+E + + Q ++ N +L E
Sbjct: 475 KELQEEIENIKHQMDIAQRNYDLETLSRLKYGKLVELEKQLQEQIKLQDEKKTNSLLKEE 534
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IA++VS+WT IPV++L + E+++L IG EAV +VA S+LR+R+G
Sbjct: 535 VTEEEIAQIVSQWTNIPVSKLVETERDKLLSLETILHKRVIGQDEAVTSVANSILRARSG 594
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSF+FLGPTGVGKTELAKAL++ LFD E+ ++RIDMSEY E+H+V+RLIGAP
Sbjct: 595 LKDPRKPIGSFIFLGPTGVGKTELAKALSQALFDSEDNIIRIDMSEYQEKHTVARLIGAP 654
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRR+PYS++LFDE+EKAH VFN LLQ+LDDGRLTD +G+TV+F+
Sbjct: 655 PGYVGYEEGGQLTEAVRRKPYSIILFDEIEKAHPEVFNILLQLLDDGRLTDSKGKTVNFK 714
Query: 701 NTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+TV+IMTSN+G++ LL + GKVT + A+ +V ++ F+PE LNR+D+I++F+PL
Sbjct: 715 DTVVIMTSNIGSQILLDSVKESGKVTDK-AKTEVEDMLKYSFKPEFLNRIDDIIMFNPLE 773
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
Q+ ++ L +KD+ RL +R + L +TD A +++ E+Y P GARP++R+L++ V T
Sbjct: 774 KSQILQIVDLCLKDIQKRLEDREIVLNITDKAKELIANEAYTPELGARPVKRYLQRNVET 833
Query: 819 ELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
L + +++ + E S V ID GD++V R
Sbjct: 834 LLGKEIIKGTVTEGSKVTIDVD--GDDIVIR 862
>gi|419964527|ref|ZP_14480483.1| ATP-dependent chaperone ClpB [Rhodococcus opacus M213]
gi|414570109|gb|EKT80846.1| ATP-dependent chaperone ClpB [Rhodococcus opacus M213]
Length = 877
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/862 (53%), Positives = 601/862 (69%), Gaps = 29/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
M+ T K+ EA+ A +AT GH + HL +AL+ G+ + + AG A
Sbjct: 1 MDTGSLTEKSREALQEAQNVATRMGHTEVDGEHLLLALVDQQEGLVPRLLEQAGANVDAL 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
ER ++ K+ P ++ + L K++ A+ K D++++V+ L++ L
Sbjct: 61 RSDLERELSR-RPKVSGPGATPGQVTITQRLAKLLDAAEREAKRLKDSYVSVEHLVMALS 119
Query: 119 ED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ- 174
E+ S G + GV + + K+RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 120 EEGSASAAGRVLASHGVTRDAFLTALTKVRGNQ--RVTSATPEGAYEALEKYGRDLVSEG 177
Query: 175 -AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
AGKLDPVIGRD EIRRV +ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP L
Sbjct: 178 RAGKLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT--E 291
D + +LDMG+LVAGAKYRGEFEERL+AVL EV+ AEG ++LF+DE+H V+GAG E
Sbjct: 238 RDKTIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGHILLFVDELHTVVGAGSVGGE 297
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
GS+DA N+ KPMLARG+L IGATTL+EYRK++E DAA ERRFQ V V EPS D +SIL
Sbjct: 298 GSLDAGNMLKPMLARGELHMIGATTLDEYRKHIESDAALERRFQTVLVDEPSAEDAISIL 357
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RGL+E+ E HGV+IQD ALV A LS RYIT R LPDKAIDLVDEACA +R ++DS P
Sbjct: 358 RGLRERLEVFHGVKIQDGALVAAVTLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPA 417
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
E+D L RK +LEIE AL KE D ASK RL E+RKEL DLR + +++ E++ I
Sbjct: 418 ELDELTRKVTRLEIEEAALSKETDAASKTRLEELRKELADLRAEADARHAQWEAERQAIR 477
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLM 527
++ L+ + E L +EAER YDL RAA+LRYG I + +EAA QL Q N +
Sbjct: 478 RVQELRGELERLRHEAEEAERNYDLNRAAELRYGEITALERRLEAAEEQLATRQG-RNPL 536
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLR 576
L E V D+IAE+V+ WTGIPV RL + E+E R++G EAV VA++V+R
Sbjct: 537 LREVVTEDEIAEIVAAWTGIPVARLQEGEREKLLKLDEILHERVVGQDEAVQLVADAVIR 596
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
+R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E+ +VR+DMSEY E+H+VSRL
Sbjct: 597 ARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQERHTVSRL 656
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
IGAPPGYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQVLDDGR+TD QGR
Sbjct: 657 IGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQ 716
Query: 697 VDFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFD 755
VDFRNTVIIMTSN+G++HLL G+ ++ AR++VL E+R HFRPE LNR+D+IV+F
Sbjct: 717 VDFRNTVIIMTSNIGSQHLLEGVTADGEIKPDARERVLAELRGHFRPEFLNRVDDIVLFT 776
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PL+ Q+ + LQ+ D+ RL+ER + L +T A ++ +DP+YGARP+RR++ +
Sbjct: 777 PLTLPQIEHIVELQLTDLRNRLSERQIHLDITPEARRLIAEHGFDPVYGARPLRRYIAHE 836
Query: 816 VVTELSRMLVREEIDENSTVYI 837
V T++ R L+R EI+ T+ +
Sbjct: 837 VETKIGRALLRGEIEPGGTIGV 858
>gi|285025947|dbj|BAI67908.1| ClpB protein [Acetobacter pasteurianus]
Length = 871
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/866 (52%), Positives = 610/866 (70%), Gaps = 27/866 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT ++ + A +A + Q TP HL A+L D G + I +AGG A
Sbjct: 1 MDIAKFTDRSRGFLQAAQTIALRDFNQQLTPEHLLKAMLDDNEGAASSLIRSAGGNPEAV 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTT-LIKVIRRA-QAAQKAHGDTHLAVDQLILGLL 118
A QA+ KLP + PA+T L++++ A Q AQKA GD+ +A D+L++ +
Sbjct: 61 KA--ATEQALAKLPKVQGSGAGQPAATPELVRILDNAEQTAQKA-GDSFVAQDRLLVAIA 117
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D+ G KE G + ++ + +R +GR V S + + F ALK Y RD+ E A
Sbjct: 118 ASDTPAGRALKENGASADTLEKAITTIR--KGRTVTSENAEANFDALKKYARDVTEVALK 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++L+RR+KNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 176 GKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEALKN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LDMGALVAGAKYRGEFEERLKAVLKE+E AEG++ILFIDE+H ++GAGRT+G+MD
Sbjct: 236 KKLLSLDMGALVAGAKYRGEFEERLKAVLKEIESAEGQIILFIDEMHTLVGAGRTDGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG L CIGATTL+EYRKY+EKDAA RRFQ V+V EPSV DT+SILRG+K
Sbjct: 296 ASNLIKPELARGTLHCIGATTLDEYRKYIEKDAALARRFQPVFVGEPSVADTISILRGIK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+D
Sbjct: 356 EKYELHHGVRITDGALVAAATLSNRYITDRFLPDKAIDLIDEAASRLRMQIDSKPEELDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE AL KE D A K RL V EL DL +K L + EK R++ I++
Sbjct: 416 LDRRIIQLKIEREALRKEDDTAGKDRLEAVEAELADLEEKSNTLSAAWHAEKNRVNTIQK 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTETV 532
L+++ ++ ++ A+R+ DL RA++L YG I ++A I + + + + ++ +++E V
Sbjct: 476 LQEQLDQARSDVEVAQRKGDLGRASELMYGVIPNLQAQIAEAQKTEEETAKKDDLVSEAV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
+A VVSRWTG+PV R+ + E+ +L +G +A+ AV+++V R+RAGL
Sbjct: 536 TDQGVASVVSRWTGVPVDRMLEGERAKLLRMEDELRKSVVGQEQALKAVSDAVRRARAGL 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTEL KALA LFDD+ L+RIDMSE+ME+H+V+RLIGAPP
Sbjct: 596 QDPNRPIGSFLFLGPTGVGKTELTKALARFLFDDDKALLRIDMSEFMEKHAVARLIGAPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGG LTEAVRRRPY V+LFDEV+KAH VFN LLQVLDDGRLTDGQGRTVDFRN
Sbjct: 656 GYVGYEEGGVLTEAVRRRPYQVILFDEVKKAHEDVFNILLQVLDDGRLTDGQGRTVDFRN 715
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+II+TSNLG+E+L + G+ + + + QV++ VR+HFRPE LNRLDEI++F L
Sbjct: 716 TLIILTSNLGSEYLANLPDGE-SPDMVQAQVMKVVREHFRPEFLNRLDEIILFSRLQKAD 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ +Q+ + L +R + L + + A + E YDPIYGARP++R +++ + L+
Sbjct: 775 MTKIVDIQIARLQQLLDDRKITLHLDNLAEAWLANEGYDPIYGARPLKRVIQRTLQNPLA 834
Query: 822 RMLVREEIDENSTVYIDASPKGDNLV 847
L+ I + TV I A+ GD L+
Sbjct: 835 EQLLEGNILDGETVNISAN--GDGLL 858
>gi|423618579|ref|ZP_17594413.1| chaperone ClpB [Bacillus cereus VD115]
gi|401253156|gb|EJR59400.1| chaperone ClpB [Bacillus cereus VD115]
Length = 866
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/874 (51%), Positives = 624/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNIDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E V +KK PS T + E + ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQDVENV----IKKKPSVTGSGAEAGKLYITSNLQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMSAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
G+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 TGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ +++ HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLKGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R + + +TD+A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHITVELTDSAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|114569201|ref|YP_755881.1| ATPase [Maricaulis maris MCS10]
gi|114339663|gb|ABI64943.1| ATPase AAA-2 domain protein [Maricaulis maris MCS10]
Length = 868
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/852 (51%), Positives = 592/852 (69%), Gaps = 24/852 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D +T + I A LA + H QF P+HL AL+ D +G+ I AGG +
Sbjct: 1 MEFDTYTDRARSIIQAAQGLALKSSHQQFAPVHLLKALMDDNAGLAGNLIKAAGGR--LR 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILG--LL 118
+ +QA+ +P A ++ + K+ A+ A GD + ++++L L
Sbjct: 59 QVQDGVDQALAAIPRVDAADAKLYLAPETAKLFGAAEEASTKAGDQFVTAERILLAMALA 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+++ D+ K AGV + + + LR +G+ +S S + ++ALK Y RDL E A G
Sbjct: 119 SGTKVADILKAAGVTPQALNTAINDLR--QGKTADSQSAEDGYEALKKYARDLTEVAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L +
Sbjct: 177 KLDPVIGRDEEIRRAIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKEK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL+ALDMG+L+AGAKYRGEFEERLKAVL EVE A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 RLLALDMGSLIAGAKYRGEFEERLKAVLSEVENANGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V + EP+V DTVSILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVMIEEPTVQDTVSILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +R+Q+DS+PEE+D +
Sbjct: 357 KYEVHHGVRIADSAIVSAANLSNRYITDRFLPDKAIDLMDEASARLRMQIDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL+KEKD ASK RL + KE+ +L + L ++ EK+++ L
Sbjct: 417 DRRAIQLKIEAEALKKEKDDASKERLATISKEIAELESRSAELTATWRAEKDKLASATTL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K+ + L +AERR DL RA++++YG + ++E + E + D+ E V +Q
Sbjct: 477 KEAIDRARSDLADAERRGDLGRASEIKYGQLPDLETKLAAAEAD-GDDGAAKQEVVDDEQ 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA++VSRWTG+PV ++ + E+++L IG A+ AV+++V R+RAGL P
Sbjct: 536 IAQIVSRWTGVPVDKMLEGERDKLLRMEDALRGRVIGQDPALEAVSDAVRRARAGLKDPA 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSFLFLGPTGVGKTEL KALAE LFDDE+ + R+DMSEYME+HSV+R+IGAPPGYVG
Sbjct: 596 RPIGSFLFLGPTGVGKTELTKALAEFLFDDEHAVSRLDMSEYMEKHSVARMIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY VVL DE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 656 YEEGGALTEAVRRRPYQVVLLDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTIII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLG+EHL + ARD V+ VR HFRPE LNR+DEI++F L+ E + +
Sbjct: 716 MTSNLGSEHL----QLVDDAEDARDSVMASVRGHFRPEFLNRIDEIILFRKLAEEHMGAI 771
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+ + LA+R + + + A + A+ YDP YGARP++R ++K++ L+R+L+
Sbjct: 772 VDIQLGYLDRLLADRRMTVEIDAGARAWLAAKGYDPAYGARPLKRVIQKELQDPLARLLL 831
Query: 826 REEIDENSTVYI 837
I + T+ +
Sbjct: 832 EGGIKDGDTIQV 843
>gi|227499469|ref|ZP_03929580.1| ATP-binding ClpB chaperone [Anaerococcus tetradius ATCC 35098]
gi|227218531|gb|EEI83774.1| ATP-binding ClpB chaperone [Anaerococcus tetradius ATCC 35098]
Length = 861
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/854 (48%), Positives = 613/854 (71%), Gaps = 21/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT K+ EAI + +A + + +HLA AL+++ I +Q + + +
Sbjct: 1 MDINKFTQKSQEAINDSQAMAIKNSNPEVNEIHLAYALVNNSDSIVSQILKSMKVDYEGY 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-E 119
+E + + LPSQ+ + P S K++ +A+ K GD+ ++ + + L LL E
Sbjct: 61 RSE--LTKKVDSLPSQSGNSNIYP-SQLFQKILLKAEDYAKDMGDSFVSTEHIFLSLLKE 117
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
D+Q+ + K+ G++ + K + +R +G+KV + + + T L+ YGR+L ++A GK
Sbjct: 118 DTQVDPINKKYGISASNFKKSIGNVR--KGQKVNNDNPEETTNPLEKYGRNLTQEAREGK 175
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DPVIGRD EIR +RILSRR KNNPVLIG+PGVGKTA+VEGLAQRIV DVP +
Sbjct: 176 IDPVIGRDTEIRNALRILSRRKKNNPVLIGQPGVGKTAIVEGLAQRIVNNDVPEPIQGRT 235
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+ +LDMG+LVAGAKYRG+FEERLKAV+ EV++++GK+I+FIDEIH ++GAG++EG+MDA+
Sbjct: 236 IFSLDMGSLVAGAKYRGQFEERLKAVIDEVQKSDGKIIMFIDEIHNIVGAGKSEGAMDAS 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPMLARG+++ IGATTL EYR+Y+EKD A ERRFQ+V V EPSV DT+SILRG+K+K
Sbjct: 296 NIMKPMLARGEIKVIGATTLNEYRQYIEKDGALERRFQKVMVEEPSVEDTISILRGIKDK 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HG+RIQD A++ AA+LS RYI+ R LPDKAIDL+DEACA VR ++D+ P +D +
Sbjct: 356 YEIFHGIRIQDSAVIAAAELSDRYISDRFLPDKAIDLMDEACATVRTEIDTMPTYLDEQK 415
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK +QL+IE+ AL+KE D+ SK RL E+ KEL DL +K M +K+EK ID+I+++K
Sbjct: 416 RKLLQLQIEITALKKEDDEYSKKRLAELEKELADLSEKYDEDFMSWKEEKSAIDDIKKIK 475
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD-ENLMLTETVGPDQ 536
++ +++ +++AER YD + ++L+YG ++E++ + + D ++ + E V +
Sbjct: 476 EEIDKVNVEIEQAERNYDFEKLSELKYGKLEELKQKLEKANKMSKDGKDGSIKEEVTDED 535
Query: 537 IAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+VVS WT IPV++L ++E+ +R+IG EA+ AV+ +++R+R+GL
Sbjct: 536 VADVVSNWTNIPVSKLVESERSKILKLPEKLHQRVIGQQEAITAVSNAIIRARSGLKSHN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTELAKAL E +FDDE ++RIDMSEYME++SVSRLIGA PGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELAKALTEAMFDDERNMIRIDMSEYMEKYSVSRLIGAAPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQVLDDGRLTD QGRTVDF+NT+II
Sbjct: 656 YEEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVDFKNTIII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEV-RKHFRPELLNRLDEIVVFDPLSHEQLRK 764
MTSN+G+E+L+ G+ T+ + + + R F+PE LNR+D+IV+F PL+ +++ K
Sbjct: 716 MTSNIGSEYLIDGLNDNGTIDDENKKKVDAILRNSFKPEFLNRIDDIVMFTPLTSDEVYK 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ LQ+ D+ +RL ++ + L ++ AA + +L +Y+ YGARP++R+L+ V TEL +++
Sbjct: 776 IIDLQINDIRLRLEDKDINLEISKAAKEYILKNAYNIEYGARPVKRFLQSHVETELGKLI 835
Query: 825 VREEIDENSTVYID 838
+ ++ E T +D
Sbjct: 836 IEGKVAEKDTALLD 849
>gi|423509092|ref|ZP_17485623.1| chaperone ClpB [Bacillus cereus HuA2-1]
gi|402457236|gb|EJV89005.1| chaperone ClpB [Bacillus cereus HuA2-1]
Length = 866
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/874 (51%), Positives = 625/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++++ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLQDDYISIEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTKFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGAITDNSHVVVDV--ENNELVVHVK 866
>gi|427717076|ref|YP_007065070.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 7507]
gi|427349512|gb|AFY32236.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 7507]
Length = 871
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/855 (50%), Positives = 612/855 (71%), Gaps = 23/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
N ++FT K EAIA ++ Q HL ALL A AI G N +
Sbjct: 5 NQNQFTEKAWEAIAHTPDIVKQYQQQQIESEHLLKALLEQEG--LAIAILTKAGANIQKV 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+R Q +++ P + + + + ++ RA +K D +++V+ + L +D
Sbjct: 63 RDRT-EQFLQRQPKVSGSSTSVYWGRSADTLLDRADGYRKDFQDEYISVEHIFLAYAKDD 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G L +E G+ A++K ++++RG + KV + + ++AL+ YGRDL E A G+L
Sbjct: 122 RFGKGLLQEFGLNEAKLKDIIKQVRGSQ--KVTDQNPEGKYEALEKYGRDLTEAASKGQL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L + +L
Sbjct: 180 DPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGDVPKSLENRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAK+RGEFEERLKAVLKEV E+ G ++LFIDEIH V+GAG T+G+MDA N
Sbjct: 240 IALDMGALIAGAKFRGEFEERLKAVLKEVTESRGNIVLFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P+V DT+SILRGL+E+Y
Sbjct: 300 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPNVEDTISILRGLRERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HH V I D ALV AA LS+RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 ETHHDVTISDSALVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QL++E +L+KE D AS+ RL + KE+ DL+++ + L +++ EK ID+I +K+
Sbjct: 420 KILQLQMERLSLQKESDIASRERLERLEKEIADLQEEQRTLNAQWESEKGIIDKISSVKK 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ E + +Q+AER Y+L +AA L+Y + +++EA +L Q + +L + V
Sbjct: 480 ELERVNQEIQQAERNYELEKAAKLKYTTLIDLHRQLEAVENELAAVQRNGKSLLRKEVTE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
IAEV+S+WTGIP+++L ++EKE R++G +EAV AVA+++ RSRAGL
Sbjct: 540 SDIAEVISKWTGIPISKLVESEKEKLLHLEDELHHRVVGQSEAVTAVADAIQRSRAGLAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA +FD E+ LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 600 PNRPIASFIFLGPTGVGKTELAKALAAYMFDTEDALVRIDMSEYMEKHAVSRLIGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QG VDF+N +
Sbjct: 660 VGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHKVDFKNAI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L + + +V++ +R FRPE LNR+DEI++F L ++LR
Sbjct: 720 IIMTSNIGSQYILDVAGDDSSYDEMQHRVMEAMRNSFRPEFLNRIDEIIIFHTLQKQELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ LQ+ + RL +R ++L ++D+ALD + YDP++GARP++R +++++ T++++
Sbjct: 780 RIVLLQVDRLRKRLTDRKMSLKLSDSALDFLAEVGYDPVFGARPLKRAIQRELETQIAKA 839
Query: 824 LVREEIDENSTVYID 838
++R + ++ T+++D
Sbjct: 840 ILRGDFNDGDTIFVD 854
>gi|120401674|ref|YP_951503.1| ATPase [Mycobacterium vanbaalenii PYR-1]
gi|119954492|gb|ABM11497.1| ATPase AAA-2 domain protein [Mycobacterium vanbaalenii PYR-1]
Length = 848
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/866 (53%), Positives = 602/866 (69%), Gaps = 42/866 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + AT+AG+ Q P HL +ALL+ GI A + G E A
Sbjct: 4 FNP---TTKTQAALTSALQAATAAGNPQIAPAHLLMALLTQNDGIAAPLLEAVGVEPATI 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
AE + + +LPS T + + + I I A D +++ + L++GL
Sbjct: 61 RAET--QRLLDRLPSATGSSSQPQLAPQAIAAITAATHLASEMDDEYVSTEHLLVGLATG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
D+ L G + ++ K+RG +V S + T+QAL+ Y DL +A GK
Sbjct: 119 DADTAKLLTGHGASPQALREAFVKVRGSA--RVTSPDPEGTYQALEKYSTDLTARAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ GDVP +L D
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIIAGDVPESLRDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+++LD+G++VAGAKYRGEFEERLKAVL +++ + G++I FIDE+H ++GAG T E +MDA
Sbjct: 237 VVSLDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGESAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV V EPSV DTV ILRGLKE
Sbjct: 297 GNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVMVGEPSVEDTVGILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+P EID +
Sbjct: 357 RYEVHHGVRITDSALVSAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE ALEKE D ASK RL ++R EL D ++KL L R++ EK ID +R L
Sbjct: 417 ERLVRRLEIEEMALEKESDAASKDRLEKLRSELADQKEKLSELTTRWQNEKGAIDVVREL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVE----AAIGQLEGNQSDENLMLTETV 532
K++ EEL A AER DLA+AA+LRYG I EVE AA+ Q E +N+ML E V
Sbjct: 477 KEQLEELRGAADRAERDGDLAKAAELRYGRIPEVEKKLDAAVPQAEAR---DNVMLKEEV 533
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
GPD IA+VVS WTGIP R+ + E +R++G AV AV+++V RSRAG+
Sbjct: 534 GPDDIADVVSAWTGIPAGRMLEGETAKLLRMEDELGKRVVGQKNAVQAVSDAVRRSRAGV 593
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +PTGSF+FLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RL+GAPP
Sbjct: 594 ADPNRPTGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPP 653
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+++GGQLTEAVRRRPY+V+LFDE+EKAH VF+ LLQVLD+GRLTDGQGRTVDFRN
Sbjct: 654 GYVGYDQGGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRN 713
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T++I+TSNLGA +QV+ VR F+PE +NRLD++++FD L+ EQ
Sbjct: 714 TILILTSNLGAGG-------------NEEQVMAAVRAAFKPEFINRLDDVIMFDALNPEQ 760
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L + +Q+ + RLA+R + L V+ A + +DP+YGARP+RR +++ + +L+
Sbjct: 761 LVSIVDIQLAQLQKRLAQRRLTLEVSLPAKKWLAERGFDPLYGARPLRRLIQQAIGDQLA 820
Query: 822 RMLVREEIDENSTVYIDASPKGDNLV 847
++L+ ++ + V ++ SP GD+LV
Sbjct: 821 KLLLAGDVHDGDVVPVNVSPDGDSLV 846
>gi|410657195|ref|YP_006909566.1| ClpB protein [Dehalobacter sp. DCA]
gi|410660230|ref|YP_006912601.1| ClpB protein [Dehalobacter sp. CF]
gi|409019550|gb|AFV01581.1| ClpB protein [Dehalobacter sp. DCA]
gi|409022586|gb|AFV04616.1| ClpB protein [Dehalobacter sp. CF]
Length = 861
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/854 (51%), Positives = 608/854 (71%), Gaps = 21/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+ ++FT K+ EAI A A S ++Q P HL +ALL G+ Q +N A+
Sbjct: 3 FDTNRFTQKSQEAIIAAQNNAESNHNSQVEPEHLLLALLEQNEGVVPQILNKLNISLASV 62
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
S + ++ +LP A ++ S + V+ A + GD +++ + L+L + +
Sbjct: 63 SEKT--KSSIARLPRMMGAASQLSISPRMRTVLVNAHDQMEPFGDDYVSTEHLLLAVADQ 120
Query: 121 S--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ G + KEAGV + ++++RG + +V + + T+ AL+ YGR+LV A G
Sbjct: 121 AGGDAGKILKEAGVTREALLKVLKEIRGSQ--RVTGQNPEGTYAALEQYGRNLVTLARRG 178
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP + +
Sbjct: 179 KLDPVIGRDEEIRRVLQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPEAIKNK 238
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+I+LDMGAL+AGAKYRGEFEERLKAVLKEVE E +ILFIDE+H V+GAG EG+MDA
Sbjct: 239 EVISLDMGALIAGAKYRGEFEERLKAVLKEVESREN-IILFIDELHTVVGAGAAEGAMDA 297
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL EYRK++EKDAA ERRFQ V VA P+V DT+SILRGLKE
Sbjct: 298 GNMLKPMLARGELRMVGATTLNEYRKHIEKDAALERRFQTVIVAPPTVEDTISILRGLKE 357
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D A++ A+ LS RYI+ R LPDKAIDL+DEA A +R+++ S+P+E+D++
Sbjct: 358 RYETHHGVRITDSAIIAASILSDRYISERFLPDKAIDLIDEAAARLRMEITSEPQELDDI 417
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQLEIE AL+KEKDKAS+ RL + KEL DL++K L + ++E+E++ I +L
Sbjct: 418 KRRVMQLEIEREALKKEKDKASQERLANIEKELGDLKEKRSALEAQLQEEREKLGNIHKL 477
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD-ENLMLTETVGPD 535
K+ + ++ A+++YD +AA+L+YG + ++E + +LE S EN +L + V
Sbjct: 478 KEDIDRTRVEIENAQQKYDYNKAAELQYGVLPKLEKELAELEQLVSGRENTLLKQEVSES 537
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGRP 584
IAE+V++WT IPV++L ++E E+LI + E AV AVA++V R+R GL P
Sbjct: 538 DIAEIVAKWTHIPVSKLLESEAEKLITMEENLHQRVIGQDKAVQAVADAVRRARTGLQDP 597
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALAE LFD+E L+RIDMSEYME+HSV+RLIGAPPGYV
Sbjct: 598 NRPLGSFLFLGPTGVGKTELAKALAEFLFDNEQALIRIDMSEYMEKHSVARLIGAPPGYV 657
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PY+V+L DEVEKAH VFN LLQ+LDDGRLTDGQGR V+F+NTV+
Sbjct: 658 GYDEGGQLTEAVRRKPYAVILLDEVEKAHGDVFNVLLQLLDDGRLTDGQGRIVNFKNTVV 717
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSN+ + + + ++ R + E+ ++FRPE +NRLDE ++FDPL E L +
Sbjct: 718 ILTSNIAGQEIREMNENHSSRELIRKTIEAELSRYFRPEFINRLDETIIFDPLKKEDLVR 777
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+ + RL ERG+ L ++D AL ++ E YDP++GARP++R +++++ L++ +
Sbjct: 778 IVEIQLDLLRKRLKERGLTLTLSDKALYMLTEEGYDPVFGARPLKRVIQQRIQNPLAKQI 837
Query: 825 VREEIDENSTVYID 838
++ E E + + +D
Sbjct: 838 LQGEFPEGTKILVD 851
>gi|167746142|ref|ZP_02418269.1| hypothetical protein ANACAC_00838 [Anaerostipes caccae DSM 14662]
gi|167654657|gb|EDR98786.1| ATP-dependent chaperone protein ClpB [Anaerostipes caccae DSM
14662]
Length = 891
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/858 (50%), Positives = 617/858 (71%), Gaps = 29/858 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
MN +KFT K+ EA+ ++A + + HL +LL+ + + N ++
Sbjct: 32 MNINKFTQKSVEAVNQCEKIAYDCQNQEIDQEHLLYSLLTIEDSLILSLLEKMNVNKDSF 91
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A+ Q ++K P + ++ S L +V+ + KA GD +++V+ L L ++
Sbjct: 92 LSQAQ----QLLQKKPKVSGG--QVYMSQALNQVLLAGEDEMKAMGDEYVSVEHLFLAMI 145
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ ++ + +LF+ G+ R + ++RG +KV + + + T+ L+ YG DLV++A
Sbjct: 146 KKPNNAVKELFRGYGITRDRFLEVLSEVRGD--KKVTTDNPEATYDTLEKYGYDLVKRAR 203
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
KLDPVIGRD EIR VVRILSR++KNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L
Sbjct: 204 EQKLDPVIGRDSEIRNVVRILSRKSKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEQLK 263
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + +LDMG+LVAGAKYRGEFEERLKAVL+EV+++EG++ILFIDE+H ++GAG+TEGSM
Sbjct: 264 DKTIFSLDMGSLVAGAKYRGEFEERLKAVLEEVKKSEGQIILFIDELHTIVGAGKTEGSM 323
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRG+
Sbjct: 324 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVDEPTVEDTISILRGI 383
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HGV+I D +LV AA LS RYIT R LPDKAIDLVDEACA ++ +++S P E+D
Sbjct: 384 KERYEVFHGVKITDGSLVAAATLSNRYITDRFLPDKAIDLVDEACAMIKTEMNSLPSELD 443
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
++RK MQLEIE AL+KE D S+ RL+E+++EL ++R+ ++ EK ++ +
Sbjct: 444 EVQRKIMQLEIEEAALKKEDDNLSRERLLELQRELAEMREDFNAKKATWENEKSSVERVS 503
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVG 533
+L+++ E + +Q A+R YDL +AA+L+YG + E++ + + E + ++ M+ E+V
Sbjct: 504 KLREEIESVNNEIQIAQRNYDLNKAAELQYGRLPELKKQLEEEEEKVRKEDRSMVRESVT 563
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
++IA+++SRWTGIPV +L ++E+ +R++G AV V +S++RS+AG+
Sbjct: 564 DEEIAKIISRWTGIPVAKLTESERNKTLHLDEILHKRVVGQDNAVQLVTDSIIRSKAGIK 623
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAKALAE LFD+E +VRIDMSEYME+HSV+RLIGAPPG
Sbjct: 624 DPSKPIGSFLFLGPTGVGKTELAKALAESLFDNEQNIVRIDMSEYMEKHSVARLIGAPPG 683
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD +GRTVDF+NT
Sbjct: 684 YVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSKGRTVDFKNT 743
Query: 703 VIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
++IMTSN+G+ +LL G+ G +T + A D V+ +++ HFRPE LNRLDE+++F PL+ E
Sbjct: 744 ILIMTSNIGSTYLLEGIDQSGNITKE-AEDMVMADLKNHFRPEFLNRLDEMILFKPLTKE 802
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + L + D+ RL+++ +A+ +T AA V YDP+YGARP++R+L+K V T
Sbjct: 803 NITNIIDLLVADLNKRLSDKELAVELTPAAKIFVADNGYDPMYGARPLKRYLQKSVETLA 862
Query: 821 SRMLVREEIDENSTVYID 838
+R+++ + ++ T+ ID
Sbjct: 863 ARLILGDGVNMEDTILID 880
>gi|338812538|ref|ZP_08624710.1| ATP-dependent chaperone ClpB [Acetonema longum DSM 6540]
gi|337275468|gb|EGO63933.1| ATP-dependent chaperone ClpB [Acetonema longum DSM 6540]
Length = 866
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/871 (51%), Positives = 607/871 (69%), Gaps = 30/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ DKFT K I A +LA H + T HL +AL D G+ A + A Q
Sbjct: 1 MDQDKFTQKAAAVIQEAQQLAAVNYHQELTTRHLILALAQDNEGMIAYIL--AQYNIQIQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ Q +K +P+ + +T +++V+ AQ D +++V+ L L +ED
Sbjct: 59 AFRGKLEQLLKNMPAVKGQEISLRMNTAMVRVLALAQKQAADMRDEYVSVEHLFLAAVED 118
Query: 121 --SQIGDLFKEAGVAVARVKSEVEKLR-GKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
S + ++ +E G++ +RV + + R GK G S + + + QAL YGRDL + A
Sbjct: 119 GDSDVVEVCREFGLSRSRVLETIRQFRAGKHGI---SGNPEESLQALSKYGRDLTDLARQ 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
G+LDPVIGRDEEIRRVV ILSRRTKNNPVLIGEPGVGKTA+ EGLA+R++ GDVP L +
Sbjct: 176 GRLDPVIGRDEEIRRVVEILSRRTKNNPVLIGEPGVGKTAIAEGLARRVIAGDVPEGLKN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ +LD+G+LVAGAKYRGEFEERLK VL E+++AEG +ILFIDE+H V+GAG EG+MD
Sbjct: 236 KTIYSLDLGSLVAGAKYRGEFEERLKNVLTEIKKAEGNIILFIDELHTVVGAGAAEGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL EYRKY+EKDAA ERRFQ + V +PSV DTVSILRGL+
Sbjct: 296 AGNILKPMLARGELHCIGATTLNEYRKYIEKDAALERRFQPIMVDQPSVEDTVSILRGLR 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI+D AL+ AA LS RYI+ R LPDKAIDLVDEA A +R ++DS P E+D
Sbjct: 356 ERYEVHHGVRIKDAALIAAAVLSDRYISDRFLPDKAIDLVDEAAAKLRTEIDSMPGELDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ MQLEIE AL KE D +S+ RL +R+EL +L+ + L +++ EK+ I +R
Sbjct: 416 ALHRVMQLEIEEQALGKEPDPSSQERLRRIREELANLKAQADSLKAQWQTEKQAIMRLRD 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTETV 532
LK++ + + A++ AER YDL + A+L+YG + E+E + E + ++ +ML E V
Sbjct: 476 LKKEIDTVRTAMESAERSYDLNKLAELKYGKLPELEKKLKSEEASLAENRSHRVMLKEEV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGL 581
D IA +VSRWTGIPVTRL E+E R++G AV AV E+++R+RAG+
Sbjct: 536 NEDDIARIVSRWTGIPVTRLLSGEREKLSRLEEILHQRVVGQDAAVTAVTEAIIRARAGI 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
PQ+P GSF+FLGPTGVGKTELAKAL+E LFDDE ++RIDMSEYME+H+VSRL+GAPP
Sbjct: 596 KDPQRPIGSFIFLGPTGVGKTELAKALSEVLFDDERSMIRIDMSEYMEKHTVSRLVGAPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GY+G++EGGQLTEAVRRRPYSV+L DEVEKAH VFN LLQ+LDDGRLTDG+GRTVDF+N
Sbjct: 656 GYIGYDEGGQLTEAVRRRPYSVILLDEVEKAHSDVFNILLQILDDGRLTDGKGRTVDFKN 715
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
TV+IMTSN+G++ +L+G A+++VL+ +++HFRPE LNR+D+I+VF+ L+ +Q
Sbjct: 716 TVVIMTSNIGSQEILNG-----DFAAAKERVLEMMKRHFRPEFLNRIDDIIVFNALNRDQ 770
Query: 762 LRKVARLQMKDVAIRLAER-GVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ +A L ++ + RL ++ + L+ L+++ + YDP YGARP+RR + + V TEL
Sbjct: 771 VASIAGLLLQSLGERLKKQLNITLSWDSDTLNLLAKQGYDPNYGARPLRRLIGRLVETEL 830
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
S+ +V+ EI E S V + A L R+Q
Sbjct: 831 SKKIVKGEIPEGSHVALHADKDRVKLEVRLQ 861
>gi|330991477|ref|ZP_08315428.1| Chaperone protein ClpB [Gluconacetobacter sp. SXCC-1]
gi|329761496|gb|EGG77989.1| Chaperone protein ClpB [Gluconacetobacter sp. SXCC-1]
Length = 867
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/878 (52%), Positives = 619/878 (70%), Gaps = 31/878 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT ++ + A +A + Q TP HL ALL D G + I AGG+
Sbjct: 1 MNIEKFTERSRGFLQAAQTIAMRDYNQQLTPEHLLKALLDDDQGAASSLIRAAGGQVPGI 60
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRA-QAAQKAHGDTHLAVDQLILGLL 118
+A + A+ KLP Q + A+ L++++ A QAAQKA GD ++A D+L+ +
Sbjct: 61 TAAN--DAALAKLPKVQGSGAGQPTATGELVRLLDNAEQAAQKA-GDEYVAQDRLLAAIA 117
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
++ G + G ++ + +R +GR V S + + F ALK Y RD+ E A
Sbjct: 118 ASETPAGQALRAGGATPQALEKAIAAIR--KGRTVTSENAEANFDALKKYARDVTEVALQ 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++L+RR+KNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 176 GKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEALKN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LDMGALVAGAK+RGEFEERLKAVLKE+E AEG+VILFIDE+H ++GAGR++G+MD
Sbjct: 236 KKLLSLDMGALVAGAKFRGEFEERLKAVLKEIEAAEGQVILFIDEMHTLVGAGRSDGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG L CIGATTL+EYRKY+EKDAA RRFQ VYV EP+V DT+SILRG+K
Sbjct: 296 ASNLIKPELARGVLHCIGATTLDEYRKYIEKDAALARRFQPVYVGEPTVADTISILRGIK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHG+RI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D
Sbjct: 356 EKYELHHGIRISDGALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQIDSKPEELDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE A+ KE D AS+ RLV++ EL +L++K L + EK+R++ +++
Sbjct: 416 LDRRLIQLKIEREAIRKEDDAASRERLVKLEAELSELQEKSDALTAAWHAEKDRVNAVQK 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI--GQLEGNQ-SDENLMLTETV 532
L+++ +++ ++ A+R+ DLARA++L Y + +++A I Q E +Q S + M+++TV
Sbjct: 476 LQEEMDQIRSDIEIAQRKGDLARASELMYSRLPQLQAQIAKAQEEADQISKGDGMVSDTV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
IA VVSRWTG+PV R+ + E+ +L +G A+ AV+ +V R+RAGL
Sbjct: 536 TDQGIAAVVSRWTGVPVDRMLEGERAKLLRMEDELRKSVVGQEPALKAVSNAVRRARAGL 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTEL KALA LFDDE L+RIDMSE+ME+H+VSRL+GAPP
Sbjct: 596 QDPNRPIGSFLFLGPTGVGKTELCKALARFLFDDEKALLRIDMSEFMEKHAVSRLVGAPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRN
Sbjct: 656 GYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGRTVDFRN 715
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+I++TSNLG++ +L+ + +++ R +V+Q VR HFRPE LNRLDEI++F L
Sbjct: 716 TLIVLTSNLGSD-VLAHLPDGESVETVRPEVMQVVRNHFRPEFLNRLDEIILFSRLQKAD 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ +Q+ + LA+R + L + + + E YDP+YGARP++R +++ + L+
Sbjct: 775 MGKIVEIQIGRLRKLLADRNIQLRLDKGGEEWLANEGYDPVYGARPLKRVIQRALQNPLA 834
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDA 859
+L+ I + TV +DA K D+L NG V+A
Sbjct: 835 GLLLEGTIHDGETVTVDA--KDDHLTI----NGTEVEA 866
>gi|317154035|ref|YP_004122083.1| ATP-dependent chaperone ClpB [Desulfovibrio aespoeensis Aspo-2]
gi|316944286|gb|ADU63337.1| ATP-dependent chaperone ClpB [Desulfovibrio aespoeensis Aspo-2]
Length = 865
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/873 (52%), Positives = 610/873 (69%), Gaps = 34/873 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT KT EA++ A LA GH Q HL AL++ G+ Q + G A
Sbjct: 1 MDSNKFTRKTQEAVSEAQNLAIRHGHQQIDCEHLMHALVAQEQGLVPQILRKLG--VAPD 58
Query: 61 SAERVFNQAMKKLPSQT-PA--PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ + + KLP + P PD+I + L V+ A + D ++V+ + L L
Sbjct: 59 AYMGAVDAEIAKLPRVSGPGARPDQILVTQRLQSVLVAADDQARRIKDEFVSVEHVFLAL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
+ + + +G + K+ G+ +V + ++RGK+ +V S + + T+ +LK YGRDLVE+
Sbjct: 119 MNEPSSTGVGRVNKQFGLDANKVLRALGEVRGKQ--RVTSDNPEATYDSLKKYGRDLVEE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A G+LDPVIGR EIRRV+RILSRRTKNNPVLIGE GVGKTA+ EGLAQRIV DVP
Sbjct: 177 ARQGRLDPVIGRGSEIRRVIRILSRRTKNNPVLIGEAGVGKTAIAEGLAQRIVAQDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L + + +LDM AL+AGAKYRGEFEERLKAVLKEV+ + G++I+FIDE+H ++GAG+T+G
Sbjct: 237 LKEKTVFSLDMSALIAGAKYRGEFEERLKAVLKEVQSSAGQIIMFIDELHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATT++EYRKY+EKD A ERRFQ V V EPSV DT+SILR
Sbjct: 297 AMDAGNILKPMLARGELHCIGATTIDEYRKYIEKDPALERRFQTVLVEEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E++E HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +R ++DSQP E
Sbjct: 357 GLRERFEVHHGVRISDGAVVEAAVLSNRYITDRQLPDKAIDLIDEAAALIRTEIDSQPYE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D R MQLEIE AL++E DKAS RL ++ K+L +L+++ L+ +++ EK I+
Sbjct: 417 LDKANRHIMQLEIEREALKRETDKASHERLGKLEKDLAELKERQSALLAQWENEKSGIER 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQ----LEGNQSDENLML 528
+R LK E ++EA+R +D RAA+L YG + +E + Q LE D M+
Sbjct: 477 LRSLKGDIESTRRGIEEAKRIHDYNRAAELEYGTLATLEKELAQRNEALE--SGDIPRMV 534
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRS 577
E VGPD +A+V++RWTGIPV+RL + E+E R+IG EAV AVA++VLR+
Sbjct: 535 KEVVGPDDVAQVIARWTGIPVSRLLEGEREKLLRLPEVLHGRVIGQDEAVQAVADAVLRA 594
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGL P +P GSF+FLGPTGVGKTEL K LA LFD E+ +VRIDMSEYME+H+V+RLI
Sbjct: 595 RAGLKDPSRPIGSFIFLGPTGVGKTELCKTLASALFDSEDNMVRIDMSEYMEKHTVARLI 654
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG++EGGQLTEAVRRRPYSVVLFDE+EKAH VFN LLQ+LDDGRLTD GRTV
Sbjct: 655 GAPPGYVGYDEGGQLTEAVRRRPYSVVLFDEIEKAHHDVFNVLLQILDDGRLTDSHGRTV 714
Query: 698 DFRNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFD 755
DF+NT++IMTSNLGAE++L G+ G+ V QV++ +R+HFRPE LNR+DE V+F
Sbjct: 715 DFKNTIVIMTSNLGAEYMLDGIDEHGEFREGVT-GQVMEVLRRHFRPEFLNRVDETVLFR 773
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PL +QL + L + + RLA+R + L +TDAA + +YDP +GARP+ R+++
Sbjct: 774 PLRLDQLMAIVDLLVDGLRGRLADRKIGLTMTDAARAFIAQSAYDPHFGARPLHRYIQTH 833
Query: 816 VVTELSRMLVREEIDENSTVYIDASPKGDNLVY 848
+ T L+R ++ E+ + +TV +D + G L++
Sbjct: 834 LETPLARRIISGELADGATVTLDEA--GGELIF 864
>gi|167760424|ref|ZP_02432551.1| hypothetical protein CLOSCI_02798 [Clostridium scindens ATCC 35704]
gi|167661923|gb|EDS06053.1| ATP-dependent chaperone protein ClpB [Clostridium scindens ATCC
35704]
Length = 864
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/857 (51%), Positives = 609/857 (71%), Gaps = 25/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ +A+ ++A G+ + HL ALL + + + G + A
Sbjct: 1 MNINKFTQKSLQAVQDCEKVALEYGNQEIEQEHLLYALLVQDDSLILKLMEKMGIDKNAM 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
RV K+ Q + L K + A+ K GD +++V+ L L +++
Sbjct: 61 -VNRVEEAIRKRTKVQGG---QQYVGQDLNKALIHAEDEAKQMGDEYVSVEHLFLSMIKY 116
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ ++ +F+E GV + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 117 PNKEVKTIFREMGVKRDDFLQVLSTVRGNQ--RVTSDNPEDTYDTLNKYGSDLVERARDQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR +VRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 175 KLDPVIGRDAEIRNLVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMGALVAGAKYRGEFEERLKAVL+EV+ ++G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 235 TIFSLDMGALVAGAKYRGEFEERLKAVLEEVKNSDGRIILFIDELHTIVGAGKTDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V D +SILRGLKE
Sbjct: 295 GNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVDEPTVEDAISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D +
Sbjct: 355 RYEVFHGVKITDGALVAAATLSDRYISDRFLPDKAIDLVDEACALIKTELDSMPAELDEM 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK MQ+EIE AL+KE D+ SK RL + +EL +LR+ ++ EK I+ +++L
Sbjct: 415 QRKIMQMEIEAAALKKEDDRLSKERLEHLNQELAELRETFAGKKAQWDNEKVGIERVQKL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
++K E++ +++A++ YDL RAA+L+YG + +++ + + E DE+ L E+V +
Sbjct: 475 REKIEQVNKEIEKAQQAYDLNRAAELQYGRLPQLQKQLEEEETKIKDEDRSLVHESVTDE 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+I +VSRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+ P
Sbjct: 535 EIGRIVSRWTGIPVAKLNESERSKTLHLADELHKRVIGQDEGVELVTEAIIRSKAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALAE LFDDE+ +VRIDMSEYME+ SVSRLIGAPPGYV
Sbjct: 595 TKPIGSFLFLGPTGVGKTELAKALAESLFDDESNMVRIDMSEYMEKFSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT++
Sbjct: 655 GYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTIL 714
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+ +LL G+ G ++ + ++ V++E++ HFRPE LNRLDE+++F PL+ + +
Sbjct: 715 IMTSNIGSGYLLDGIDDHGNIS-EDSQQAVMEELKAHFRPEFLNRLDEMIMFKPLTKDNI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L + DV RLAE+ + +A+T+AA + V+ YDP YGARP++R+L+K V T +R
Sbjct: 774 YDIIDLLVADVNQRLAEKEICIALTEAAKNYVVEGGYDPTYGARPLKRYLQKHVETLAAR 833
Query: 823 MLVREEIDENSTVYIDA 839
++++ ++ T+ IDA
Sbjct: 834 LMLQGDVGAQETIVIDA 850
>gi|354557532|ref|ZP_08976790.1| ATP-dependent chaperone ClpB [Desulfitobacterium metallireducens
DSM 15288]
gi|353550326|gb|EHC19763.1| ATP-dependent chaperone ClpB [Desulfitobacterium metallireducens
DSM 15288]
Length = 863
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/865 (51%), Positives = 619/865 (71%), Gaps = 22/865 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+ ++FT K+ EAI A +A G+++ P HL +ALL G+ +Q + + A
Sbjct: 3 FDTNRFTQKSQEAIINAQNMAERNGNSEVEPEHLLLALLEQEDGVVSQVLTKL--KLAVG 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ E+ + + + P + ++ S+ L + A D +++ + ++L LL
Sbjct: 61 ALEQKTRETINRFPRISGGNVQLTISSRLRTTLVSAHDEMAIFNDEYVSTEHILLALLSR 120
Query: 121 S--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ + + KEAG+ ++ + ++RG + +V S + + T+QAL+ YGR+LVEQA G
Sbjct: 121 AGGAVEQILKEAGLTREKLLQALREVRGTQ--RVTSQNPEGTYQALEQYGRNLVEQARRG 178
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP ++ D
Sbjct: 179 KLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPESVKDK 238
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+LIALDMG L+AGAKYRGEFEERLKAVLKE+++ E VILFIDE+H V+GAG EG+MDA
Sbjct: 239 KLIALDMGLLIAGAKYRGEFEERLKAVLKEIQDHE-DVILFIDELHTVVGAGAAEGAMDA 297
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQ V V PSV DT+SILRGLKE
Sbjct: 298 SNMLKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQPVVVDAPSVEDTISILRGLKE 357
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D A++ AA LS RYI+ R LPDKAIDL+DEA A+ R+++ S P E+D +
Sbjct: 358 RYERHHGVRITDGAVIAAAVLSDRYISDRFLPDKAIDLIDEAAASQRMEITSDPFELDQI 417
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QLEIE AL+KEKD+ASK RL ++ +EL +L+++ L + + E+E + +I++
Sbjct: 418 KRRVLQLEIEREALKKEKDEASKERLTKIEEELANLKEQKSGLEAQLQGEREILAQIKQH 477
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD-ENLMLTETVGPD 535
K + ++ +++A++ YD +AA+L+YG I +E + +L+ + +N +L + V
Sbjct: 478 KDELDQARTKMEQAQQVYDYNKAAELQYGIIPHLEKELKELDEQLTGRKNSLLKQEVDEQ 537
Query: 536 QIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGRP 584
IAEVVS+WT +PVTRL + E +R++G EAV AV+++V R+RAGL P
Sbjct: 538 DIAEVVSKWTNVPVTRLLEGEMAKLVHMEDRLHQRVVGQDEAVVAVSDAVRRARAGLQDP 597
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALAE LFDDE +VRIDMSEYME+H+VSRLIGAPPGYV
Sbjct: 598 DRPLGSFLFLGPTGVGKTELAKALAEFLFDDEQAIVRIDMSEYMEKHTVSRLIGAPPGYV 657
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQ+LDDGRLTDGQGR V+F+NTV+
Sbjct: 658 GYEEGGQLTEAVRRKPYSVVLFDEIEKAHRDVFNVLLQLLDDGRLTDGQGRVVNFKNTVV 717
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSN+ + + + R +V +E++ +FRPE LNRLD+I+VF+PL E + K
Sbjct: 718 ILTSNIASPAIQEMNRSSAGQEEIRTRVTEELKNYFRPEFLNRLDDIIVFNPLGQEHIGK 777
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q++ + RLAER + + ++D A + E YDPIYGARP++R +++++ L+ L
Sbjct: 778 IVEIQLQQLHDRLAERKLIIKLSDKARGQIAQEGYDPIYGARPLKRVIQQRLQNPLAMKL 837
Query: 825 VREEIDENSTVYIDASPKGDNLVYR 849
++ E E +++D +P+G + ++R
Sbjct: 838 LQGEFKEGQQIHVDFNPEG-HFIFR 861
>gi|423555991|ref|ZP_17532294.1| chaperone ClpB [Bacillus cereus MC67]
gi|401195694|gb|EJR02644.1| chaperone ClpB [Bacillus cereus MC67]
Length = 866
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/861 (52%), Positives = 618/861 (71%), Gaps = 29/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTKFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYID 838
T+L+R L+ I +NS V +D
Sbjct: 835 TKLARELIAGTITDNSHVVVD 855
>gi|365842013|ref|ZP_09383055.1| ATP-dependent chaperone protein ClpB [Flavonifractor plautii ATCC
29863]
gi|364576519|gb|EHM53839.1| ATP-dependent chaperone protein ClpB [Flavonifractor plautii ATCC
29863]
Length = 876
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/865 (52%), Positives = 613/865 (70%), Gaps = 35/865 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG----GE 56
MN K+T K+ EA+ A +AT G+ Q HL +ALL D G+ Q + N G
Sbjct: 1 MNAQKYTQKSLEAVQNAQSIATEYGNQQIEQPHLLLALLLDEGGLIPQLLGNMGLTVPSF 60
Query: 57 NAAQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQL 113
AA AE ++KLP + + E I + + K + A++ + D +++V+ L
Sbjct: 61 TAAAKAE------VEKLPRVSGSGREQGKIYVAQDVDKCLNTAESIAASMKDEYVSVEHL 114
Query: 114 ILGLLE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL 171
+L LL+ + ++ +LF+ V V + +RG + +V S + + T+ ALK YG DL
Sbjct: 115 LLALLDTANRELKELFRTYNVQKEGVLQALTNVRGNQ--RVTSDNPEETYNALKKYGSDL 172
Query: 172 VEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDV 229
VE+A KLDPVIGRD+EIR V+RILSR++KNNPVLIGEPGVGKTA+ EGLAQRIV+GDV
Sbjct: 173 VERARANKLDPVIGRDDEIRNVIRILSRKSKNNPVLIGEPGVGKTAIAEGLAQRIVKGDV 232
Query: 230 PSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGR 289
P++L D + ALDMG+L+AGAKYRGEFEERLKAVL EV+++EG++ILFIDE+H ++GAG+
Sbjct: 233 PASLKDKTIFALDMGSLIAGAKYRGEFEERLKAVLNEVKKSEGRIILFIDELHTIVGAGK 292
Query: 290 TEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVS 349
TEG+MDA NL KP+LARG+L CIGATTL EYR+Y+EKDAA ERRFQ V V+EP+V DT++
Sbjct: 293 TEGAMDAGNLLKPLLARGELHCIGATTLNEYRQYIEKDAALERRFQPVMVSEPTVEDTIA 352
Query: 350 ILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQ 409
ILRGLKE+YE +HGV+IQD A++ AA LS RYIT R LPDKAIDL+DEACA +R ++DS
Sbjct: 353 ILRGLKERYEVYHGVKIQDGAIIAAATLSNRYITDRFLPDKAIDLIDEACAMIRTEIDSM 412
Query: 410 PEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKER 469
P E+D ++RK +Q EIE AL+KE D S+ L E++KEL ++RD+ +++ EK
Sbjct: 413 PTELDVIQRKIIQHEIEEAALKKEDDALSREHLAEIQKELAEMRDEFNAKKAQWENEKNA 472
Query: 470 IDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLM 527
I ++++L+++ E L+ A+R+YDL RAA+L+YG I E+ + E N+ +
Sbjct: 473 IGKVQKLREELESANAELEAAQRQYDLNRAAELQYGRIPELRKQLEAEEAIANEGKARSL 532
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLR 576
L + V ++IA ++ RWTGIPV +L + E+E+L +G EAV V+E++LR
Sbjct: 533 LRDKVTEEEIARIIERWTGIPVAKLMEGEREKLLHLEDILHQRVVGQDEAVRLVSEAILR 592
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
SRAG+ P +P GSFLFLGPTGVGKTELAKALAE LFD E LVRIDMSEYME+ SVSRL
Sbjct: 593 SRAGIADPDRPIGSFLFLGPTGVGKTELAKALAEALFDSEKNLVRIDMSEYMEKFSVSRL 652
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
IGAPPGYVG+EEGGQLTEAVRR PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRT
Sbjct: 653 IGAPPGYVGYEEGGQLTEAVRRHPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRT 712
Query: 697 VDFRNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVF 754
VDF+NT+II+TSNLG+++LL G+ G +T + A++ V + FRPE LNRLDEIV +
Sbjct: 713 VDFKNTIIILTSNLGSQYLLDGIDEKGDITAE-AKNAVNDLLHHSFRPEFLNRLDEIVFY 771
Query: 755 DPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEK 814
PL+ + + + L + ++ RL ++ + +A+T AA ++ +YDP +GARP+RR+++
Sbjct: 772 KPLTKDNITHIIDLLVAELNRRLEDKQLKVALTPAAKQHIIDSAYDPAFGARPLRRFVQH 831
Query: 815 KVVTELSRMLVREEIDENSTVYIDA 839
V T +SR ++ +E+ T+ +D
Sbjct: 832 SVETLISRKIIADEVQGGDTLTVDC 856
>gi|229010560|ref|ZP_04167762.1| Chaperone protein clpB 1 [Bacillus mycoides DSM 2048]
gi|228750758|gb|EEM00582.1| Chaperone protein clpB 1 [Bacillus mycoides DSM 2048]
Length = 866
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/874 (51%), Positives = 625/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++++ ++L
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLRDDYISIEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFAKFYITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV RV+
Sbjct: 835 TKLARELIAGVITDNSHVVVDV--ENNELVVRVK 866
>gi|163840613|ref|YP_001625018.1| chaperone ClpB [Renibacterium salmoninarum ATCC 33209]
gi|162954089|gb|ABY23604.1| ClpB [Renibacterium salmoninarum ATCC 33209]
Length = 871
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/871 (52%), Positives = 609/871 (69%), Gaps = 30/871 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT K+ EA++ A A++AG+ Q P H+ AL+ G+ + G A S +
Sbjct: 4 KFTTKSQEALSAAAMNASTAGNPQVEPAHMLKALMDQREGVAVALLKATGVAPDAVSVKA 63
Query: 65 VFNQAMKKLPSQTPAP-DEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ- 122
+ A+K+LP+ + + + S ++V++ AQ ++ GD+ ++ + L++G+ S
Sbjct: 64 --SAAIKELPTSSGSTVAQAQFSRAGLQVVQAAQQEAESMGDSFVSTEHLLVGIAAGSDP 121
Query: 123 IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAGKLDP 180
+ K+AG +V ++ + +RG RKV SA + TFQAL+ YG DL E ++GKLDP
Sbjct: 122 AAQILKDAGASVEAFRAALPGIRGD--RKVNSADPENTFQALEKYGTDLTEIARSGKLDP 179
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTAVVEGLAQR+V GDVP +L LI+
Sbjct: 180 VIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRMVAGDVPESLRGKSLIS 239
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LD+GA+VAGAKYRGEFEERLKAVL+E++ ++G+++ FIDEIH V+GAG +EG+MDA N+
Sbjct: 240 LDLGAMVAGAKYRGEFEERLKAVLEEIKNSDGQIVTFIDEIHTVVGAGASEGAMDAGNML 299
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARG+L IGATTL+EYR++VEKD A ERRFQQVYV EPSV DT+ ILRGLK++YE
Sbjct: 300 KPMLARGELSLIGATTLDEYREHVEKDPALERRFQQVYVGEPSVDDTIGILRGLKQRYEA 359
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA + +R+++DS PEEID L R
Sbjct: 360 HHKVSIADSALVAAASLSNRYISGRQLPDKAIDLVDEAASRLRMEIDSAPEEIDQLRRAV 419
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
+L +E AL+ E D AS RL +R ++ D +++L L R++ EK ++ + LK K
Sbjct: 420 DRLTMEELALDGESDAASIERLAALRADMADRKEELAGLNARWEAEKAGLNRVGELKAKL 479
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN------LMLTETVGP 534
+EL ++A+R DL +A+ + YG I +E + +E Q++E+ LM+ E V
Sbjct: 480 DELRSIAEKAQREGDLEQASRILYGEIPGLEQTL--VEAQQAEESLGEKPELMVAEEVTA 537
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
D IAEV+S WTGIP R+ Q E + RLIG +AV+ V+++V RSRAG+
Sbjct: 538 DDIAEVISAWTGIPAGRMLQGESQKLLSMESALGARLIGQTKAVSVVSDAVRRSRAGISD 597
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE LVRIDMSEY E+HSVSRL+GAPPGY
Sbjct: 598 PDRPTGSFLFLGPTGVGKTELAKALADFLFDDERALVRIDMSEYSEKHSVSRLVGAPPGY 657
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRRRPYSV+L DEVEKAH VF+ LLQVLDDGRLTDGQGRTVDFRN +
Sbjct: 658 VGYEEGGQLTEAVRRRPYSVILLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVI 717
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+++TSNLG++ L+ M+ + + RD V+ V F+PE LNRLDE+V+FD LS E+L
Sbjct: 718 LVLTSNLGSQFLVDPMLDE---KQKRDSVMAIVNSAFKPEFLNRLDEVVMFDALSVEELS 774
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ LQ++ +A RL ER + L V D A + YDP YGARP+RR L++++ L++
Sbjct: 775 VIVDLQVQLLAARLQERRLVLEVADGARAWLAMTGYDPAYGARPLRRLLQREIGDRLAKG 834
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRVQKNG 854
L+ EI++ TV +D + D L + +G
Sbjct: 835 LLSGEIEDGDTVLVDVAADVDELSTGIPGSG 865
>gi|374294843|ref|YP_005045034.1| ATP-dependent chaperone ClpB [Clostridium clariflavum DSM 19732]
gi|359824337|gb|AEV67110.1| ATP-dependent chaperone ClpB [Clostridium clariflavum DSM 19732]
Length = 864
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/863 (51%), Positives = 619/863 (71%), Gaps = 35/863 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DKFT K E I+++ E+A H Q HL +A+L+ G+ + ++ G +
Sbjct: 1 MNFDKFTEKAQEVISLSQEIAIRMSHQQIDGEHLHLAMLNQEDGLIPKLLSYMGIDVRMY 60
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ + Q +++LP + A+ +++ RA+ K D ++ V+ + + L++
Sbjct: 61 TND--VEQELERLPKIYGSGASGMYATRRFNEILIRAEDEAKKFRDEYIGVEHIFIRLIK 118
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D+ +F+ G+ + + + K+R + ++ S + + T+ ALK +GRDLVE A
Sbjct: 119 EKDTPSEKIFRRYGINLEKFMEALRKVRSNQ--RITSKNPEDTYDALKRFGRDLVELARQ 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD EIRR +RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRI++GDVP L D
Sbjct: 177 GKLDPVIGRDAEIRRAIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKGDVPEGLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ ALD+GAL+AGAKYRGEFEERLKAVL +V ++ G++ILFIDE+H ++GAG+ EG+MD
Sbjct: 237 KTIFALDLGALIAGAKYRGEFEERLKAVLNDVNKSNGRIILFIDELHNIVGAGKAEGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYRKY+EKDAA ERRFQ + V +P+V DT+SILRGLK
Sbjct: 297 AGNILKPMLARGELHCIGATTLDEYRKYIEKDAALERRFQPILVDQPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E++E HHGVRI D A++ A LS RYI+ R LPDKAIDL+DEA A +R ++DS P E+D
Sbjct: 357 ERFEIHHGVRITDNAIIACAVLSNRYISDRFLPDKAIDLMDEAAAMIRTEIDSMPTELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ R+ MQLEIE AL KE D+ASK RL + K++ L+DK + +++ EK+ I +
Sbjct: 417 ISRRLMQLEIERQALRKEDDQASKERLAALEKDIAALKDKADSMKAQWELEKQNIKREKD 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAA-------IGQLEGNQSDENLML 528
+KQ+ E++ ++EAER YDL + A L++G + E+E I EGN +L
Sbjct: 477 IKQQIEDVKRQIEEAERNYDLDKLAILKHGKLPELEKQLEEEKKRIKSREGNA-----LL 531
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRS 577
E V ++IAE+VSRWTGIPVT+L +NEK++L IG EAV+AV++SV+R+
Sbjct: 532 KEEVTEEEIAEIVSRWTGIPVTKLVENEKDKLLNLEQILHKRVIGQDEAVSAVSDSVIRA 591
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
R+GL ++P GSF+FLGPTGVGKTELAKALAE LFD E+ +VRIDMSEYME+HSV+RLI
Sbjct: 592 RSGLKDLRKPIGSFIFLGPTGVGKTELAKALAEALFDTEDNVVRIDMSEYMEKHSVARLI 651
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+EEGGQLTEAVRR+PY V+LFDE+EKAH VFN LLQ+LDDGRLTD QGRTV
Sbjct: 652 GAPPGYVGYEEGGQLTEAVRRKPYCVILFDEIEKAHPEVFNVLLQLLDDGRLTDSQGRTV 711
Query: 698 DFRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFD 755
+F+NTV+IMTSN+G+++LLSG+ G+++ + AR +V+ E+ ++F+PE LNR+DEIV+F
Sbjct: 712 NFKNTVVIMTSNIGSQYLLSGISPDGEISDE-ARKEVMNELSRNFKPEFLNRIDEIVLFK 770
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PL E++ K+ L + D+ RL +R + L VTD A + + +Y P+YGARP++R+L+K
Sbjct: 771 PLRKEEIIKIIDLALNDIQKRLDDRKIKLNVTDKAKEYMADSAYTPVYGARPVKRYLQKH 830
Query: 816 VVTELSRMLVREEIDENSTVYID 838
V T++++M+++ E+ + V ID
Sbjct: 831 VETQIAKMIIQGELADRMEVKID 853
>gi|424850928|ref|ZP_18275325.1| ATP-dependent chaperone ClpB [Rhodococcus opacus PD630]
gi|356665593|gb|EHI45664.1| ATP-dependent chaperone ClpB [Rhodococcus opacus PD630]
Length = 850
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/865 (52%), Positives = 596/865 (68%), Gaps = 38/865 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + A+SAG+ P HL VALL GI A + G +
Sbjct: 4 FNP---TTKTQAAMTAALQSASSAGNPDIRPAHLLVALLDQTDGIAAPLLKAVGVDPTV- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
R + +LP T A + + AQ D +++ + L++GL
Sbjct: 60 -VHREGQDLVDRLPKTTGATTTPQLGREALAALTAAQHLATELDDEYVSTEHLMVGLASG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+S + L K G ++ +RG +V S + T+QAL+ Y DL A GK
Sbjct: 119 ESDVAGLLKRHGATPEALRDAFTTVRGSA--RVTSPDPEGTYQALEKYSTDLTAAARNGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKS 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+I+LD+G++VAGAKYRGEFEERLKAVL +++ + G+VI FIDE+H ++GAG T E +MDA
Sbjct: 237 VISLDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV V EPSV DTV ILRGLKE
Sbjct: 297 GNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEEID++
Sbjct: 357 RYEVHHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDSV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE AL+KE D ASK RL ++R+EL D R+KL L R++ EK+ ID +R +
Sbjct: 417 ERIVRRLEIEEMALQKESDAASKDRLEKLRQELADEREKLNQLTTRWQNEKQAIDSVRGV 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL---EGNQSDENLMLTETVG 533
K++ E L + AER DL RAA+LRYG I ++E + Q G +D ++ML E VG
Sbjct: 477 KEQLETLRGEEERAERDGDLGRAAELRYGRIPQLEKELEQAARESGAAADGDVMLKEEVG 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
PD +A+VV+ WTGIP R+ + E +R++G EAV AV+++V R+RAG+
Sbjct: 537 PDDVADVVAAWTGIPAGRMMEGETAKLLRMESELGKRVVGQEEAVVAVSDAVRRARAGVA 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +PTGSFLFLGPTGVGKTELAK+LA+ LFDDE +VRIDMSEY E+HSV+RL+GAPPG
Sbjct: 597 DPNRPTGSFLFLGPTGVGKTELAKSLADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+E GGQLTEAVRRRPY+VVLFDEVEKAH VF+ LL VLD+GRLTDGQGRTVDFRNT
Sbjct: 657 YVGYEAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLAVLDEGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++I+TSNLGA +R+QV+ VR F+PE +NRLD++V+FDPL+ EQL
Sbjct: 717 ILILTSNLGAGG-------------SREQVMDAVRHAFKPEFINRLDDVVIFDPLTEEQL 763
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ ++ RLA R + L V+D+A + YDP+YGARP+RR +++ + +L++
Sbjct: 764 ESIVDIQLDQLSRRLAARRLTLDVSDSARFWLAVRGYDPMYGARPLRRLIQQAIGDQLAK 823
Query: 823 MLVREEIDENSTVYIDASPKGDNLV 847
+L+ ++ + TV + S GD LV
Sbjct: 824 LLLAGDVKDGDTVPVKVSETGDALV 848
>gi|295702826|ref|YP_003595901.1| ATP-dependent chaperone ClpB [Bacillus megaterium DSM 319]
gi|294800485|gb|ADF37551.1| ATP-dependent chaperone ClpB [Bacillus megaterium DSM 319]
Length = 867
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/874 (50%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K E + A A + HL L+ GI + +++ ++ Q
Sbjct: 1 MDINKMTQKLQEGVMEAQSEAIKRNQQEVDIAHLLYTLIHQQDGIAPRVLDHLHIDH--Q 58
Query: 61 SAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S ++ NQ + K P+ T + E + + L ++ +AQ D +++V+ + L L
Sbjct: 59 SFQQQVNQLLAKKPAVTGSGAEAGKVYITNKLQQLFVKAQEEASRLQDDYVSVEHIFLAL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
++ S+ G LF G+ ++ + LRG + ++ S + + T++AL YGRDLV +
Sbjct: 119 AQEPSSSEYGKLFSSHGITKKALQDVLTSLRGNQ--RITSQNPEVTYEALAKYGRDLVAE 176
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AG +DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRI+R DVP
Sbjct: 177 VRAGNIDPVIGRDGEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIIRRDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + +LDMGALVAGAK+RGEFEERLKAVL+EV+++ G+++LFIDE+H ++GAGRT+G
Sbjct: 237 LKDKTIFSLDMGALVAGAKFRGEFEERLKAVLQEVKKSNGQILLFIDELHTIVGAGRTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQQV V EPSV DT+SILR
Sbjct: 297 AMDAGNILKPMLARGELHCIGATTLDEYRQYIEKDPALERRFQQVLVEEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHGV I DRA+V AA +S RYI+ R LPDKAIDL+DEACA +R ++DS P E
Sbjct: 357 GLKERFEIHHGVNIHDRAIVSAAVMSDRYISDRFLPDKAIDLIDEACATIRTEIDSMPSE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+AS RL +RKE+ DLR++ + ++++KEK+ I
Sbjct: 417 LDEVTRRVMQLEIEEAALSKETDQASITRLEAIRKEVSDLRERADTMKLQWEKEKQSIQT 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
++ ++++ E+ L+EAE +YDL +AA+LR+G I +E + QLE ++ EN +L
Sbjct: 477 VQDVREQLEKAKRDLEEAEGKYDLNKAAELRHGRIPALEKELKQLEETAAEKAQENRLLR 536
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSR 578
E V ++IAE+V RWTGIPV++L + E+E R+IG EAV+ V ++V+R+R
Sbjct: 537 EEVTEEEIAEIVGRWTGIPVSKLVEGEREKLLKLESILQQRVIGQDEAVSLVTDAVIRAR 596
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA LFD E +VRIDMSEYME+H+VSRLIG
Sbjct: 597 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAHSLFDSEEQMVRIDMSEYMEKHAVSRLIG 656
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR TD +G+ +D
Sbjct: 657 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNVLLQILDDGRATDSKGKVID 716
Query: 699 FRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
F+NTVIIMTSN+G++ LL G+ G++T + AR+QV+ ++R+HFRPE LNR+D+ ++F P
Sbjct: 717 FKNTVIIMTSNIGSQFLLDGLTSEGEIT-EKAREQVMAQLRQHFRPEFLNRVDDTILFKP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L+ +++ + + + RL++R ++L +T+ A + + A +DP+YGARP++R+++K +
Sbjct: 776 LTVHEVKGIIDKLLVQLEKRLSDRHISLTLTEEAKNYIAASGFDPVYGARPLKRFIQKYI 835
Query: 817 VTELSRMLVREEIDENSTVYIDASPKGDNLVYRV 850
T+++R L+ +I++ S V +D K D V V
Sbjct: 836 ETKIARELIAGQIEDYSQVTVDV--KDDEFVVSV 867
>gi|302871695|ref|YP_003840331.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor obsidiansis
OB47]
gi|302574554|gb|ADL42345.1| ATP-dependent chaperone ClpB [Caldicellulosiruptor obsidiansis
OB47]
Length = 864
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/861 (50%), Positives = 615/861 (71%), Gaps = 28/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN ++FT + A A H + HL AL+++ + A+ + N G + +
Sbjct: 1 MNMERFTQSLQTTLLDAQNTAIVYKHQEIGVEHLHYALVNEDDKLVAKILKNMGID--IE 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+R + +KK+P P + S + +++ +A+ K D +++V+ + L ++
Sbjct: 59 LYKRDIEEQLKKIPMVYGPGASTVYVSRYVNEILIKAEEEAKKFKDEYISVEHVYLTMI- 117
Query: 120 DSQI---GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
DS I ++F++ G+ + ++ K+RG +++ S + + ++ LK YGRDL + A
Sbjct: 118 DSDIPSAKNIFRKYGITHEKFLQQLYKIRG--NQRITSPNPEEVYEVLKKYGRDLTDLAR 175
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L
Sbjct: 176 KGKLDPVIGRDDEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + ALD+GAL+AGAKYRGEFEERLKAVL E+ +EGK+ILFIDEIH ++GAGR EG+M
Sbjct: 236 DKTIFALDLGALIAGAKYRGEFEERLKAVLNEIIASEGKIILFIDEIHNIVGAGRAEGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT++EYRKY+EKDAA ERRFQ V V PSV DT+SILRGL
Sbjct: 296 DAGNLLKPMLARGELHCIGATTIDEYRKYIEKDAALERRFQPVLVNPPSVEDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGVRI D AL+ AA+LS RYI+ R LPDKAIDL+DEA A +R ++DS P E+D
Sbjct: 356 KERFEIHHGVRITDDALIAAAKLSDRYISDRFLPDKAIDLIDEAAALLRTEIDSMPTELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQL IE + L+KE++ ++K R+ E+ KE+ L+ + L +++ EKE I +IR
Sbjct: 416 EITRKIMQLRIEKNVLQKEENTSAKQRIEEIEKEIAQLQSRADELSAQWEYEKELIKDIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLMLTE 530
R+K++ E + ++EAER YDL R ++L+YG + E++ A+ +LE E +L E
Sbjct: 476 RIKEEIENVKIQIEEAERNYDLNRLSELKYGKLIELQKALDRKRQELE-KIPPEKRLLKE 534
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRA 579
V ++IA++VS+WTGIPV +L + E++ R++G EA+ AV +++R+RA
Sbjct: 535 EVTEEEIAKIVSKWTGIPVAKLVETERQKILELDKILHKRVVGQDEAIEAVCNAIMRARA 594
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSFLFLGPTGVGKTELA+ALAE LFD EN ++RIDM+EYME+HSVSRLIGA
Sbjct: 595 GIKDPRKPIGSFLFLGPTGVGKTELARALAEALFDSENNMIRIDMTEYMEKHSVSRLIGA 654
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PGYVG+EEGGQLTEAVR +PYSVVLFDE+EKAH VFN LLQ++DDGRLTD +GRTVDF
Sbjct: 655 QPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHRDVFNILLQIMDDGRLTDSKGRTVDF 714
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NT+IIMTSNLG+E+LL+ + + + R + +E++ HFRPE LNRLDEI++F PL+
Sbjct: 715 KNTIIIMTSNLGSEYLLNAKISNGEIDEETRKLIDRELKLHFRPEFLNRLDEIIIFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
EQ+ K+ L++ ++ +L E+G+++ +T A + ++ ++D +GARPI+R+L+K V T
Sbjct: 775 KEQIIKIIDLRVAEIQQKLIEKGISIRLTQKAKEFIMENAFDINFGARPIKRFLQKNVET 834
Query: 819 ELSRMLVREEIDENSTVYIDA 839
++R +++ I E ++ ID
Sbjct: 835 LIAREILKGTIVEGESIDIDV 855
>gi|329890890|ref|ZP_08269233.1| ATP-dependent chaperone ClpB [Brevundimonas diminuta ATCC 11568]
gi|328846191|gb|EGF95755.1| ATP-dependent chaperone ClpB [Brevundimonas diminuta ATCC 11568]
Length = 861
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/857 (51%), Positives = 602/857 (70%), Gaps = 19/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN D ++ + +A+ A LA + H QF P HL LL + G+ + I+ AGG+ +A
Sbjct: 1 MNLDLYSDRAKQAVQSAQSLALARRHQQFAPEHLLKVLLEERDGLARKLIDQAGGDPSA- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E V +KK P + +I +V A+ A K GD + ++L+ + ++
Sbjct: 60 -VELVTEGLLKKRPQVSGGSGQIYLDGDTARVFNAAEEAAKKAGDAFVTTERLLAAIAKE 118
Query: 121 SQIGDL-FKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
K AGV ++ V ++R +G+ +SA + +F ALK Y RDL E A GK
Sbjct: 119 GGAAAEALKSAGVTAKKLDDAVAEIR--KGKTADSAGAEDSFDALKRYARDLTEAARDGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DPVIGRDEEIRR +++L+RRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D +
Sbjct: 177 VDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKK 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+++LDMGAL+AGAKYRGEFEERLKAVL EV AEG+++LFIDE+H ++GAG+ +G+MDA+
Sbjct: 237 VLSLDMGALIAGAKYRGEFEERLKAVLNEVAAAEGQIVLFIDEMHTLVGAGKGDGAMDAS 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRGLKEK
Sbjct: 297 NLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA + VR+ +DS+PE +D ++
Sbjct: 357 YEVHHGVRISDSAIVAAATLSNRYITDRFLPDKAIDLIDEAASRVRMAVDSKPEALDEID 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL+IE AL+KE D AS+ RL ++ E+ DL + + R+K EK+++ + +L+
Sbjct: 417 RRLVQLKIEREALKKESDSASQQRLEKLEDEIADLEGQSDDMTARWKSEKDKVGQGAQLR 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ + L L A+R DL RA+++ YG I ++E + E + + E V +QI
Sbjct: 477 ETLDRLRAELAAAQRAGDLGRASEIAYGQIPQLEKQLADSESPAAVAAPLTPEVVDAEQI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
A VVSRWTG+PV ++ + E+E+L +G EA+ AV+++V R+RAGL P +
Sbjct: 537 AAVVSRWTGVPVDKMLEGEREKLLKMEEELGRRVVGQDEALAAVSDAVRRARAGLNDPNK 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA LFDD+N + RIDMSEYME+HSVSRLIGAPPGYVG+
Sbjct: 597 PLGSFLFLGPTGVGKTELTKALAGYLFDDDNAITRIDMSEYMEKHSVSRLIGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
+EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRT+DF+NT+IIM
Sbjct: 657 DEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTIDFKNTLIIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L G+ ++ R V+++VR HFRPE LNR+DEI++F L EQ+ +
Sbjct: 717 TSNLGSQFLADQPEGE-DVEAVRPLVMEQVRAHFRPEFLNRIDEIILFHRLGREQMGGIV 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
R+Q+ + +A+R + LA+ D+AL + + YDP+YGARP++R ++K++V +++ L+
Sbjct: 776 RIQLARLEKLMADRRLTLALDDSALTWLADKGYDPVYGARPLKRVIQKELVDPMAKKLLA 835
Query: 827 EEIDENSTVYIDASPKG 843
EI++ S V + A G
Sbjct: 836 GEIEDGSVVAVSAGSDG 852
>gi|403527068|ref|YP_006661955.1| chaperone protein ClpB 2 [Arthrobacter sp. Rue61a]
gi|403229495|gb|AFR28917.1| chaperone protein ClpB 2 [Arthrobacter sp. Rue61a]
Length = 878
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/871 (52%), Positives = 605/871 (69%), Gaps = 31/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN + FT K+ EA+A A +A GH + HL ALL +G+ + + AG + +
Sbjct: 1 MNMESFTQKSQEALAGAQRIAQLHGHTETDGEHLLAALLEQEAGLVPRLL--AGMQIDVE 58
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
R ++K P T AP ++ S L ++ A+ K D +++V+ L++ L
Sbjct: 59 ELNRAVETELQKKPKVTGPGAAPGQVYVSRRLGTLLDAAEREAKRLKDEYVSVEHLLVAL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ S G + E G+ S + ++RG + +V SA+ + T++AL+ YGRDLV
Sbjct: 119 AEEGRASAAGRVLAEHGITREAFLSVLTQVRGNQ--RVTSATPEQTYEALEKYGRDLVAD 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRD EIRRVV+ILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP
Sbjct: 177 ARTGKLDPVIGRDSEIRRVVQILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRQDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L + + +LD+ ALVAGAKYRGEFEERLKAVL EV AEG+++LF+DE+H V+GAG +EG
Sbjct: 237 LKNKTIFSLDLSALVAGAKYRGEFEERLKAVLAEVLAAEGRILLFVDELHTVVGAGASEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA N+ KPMLARG+L IGATTL+EYRK++E DAA ERRFQ V V EP V D +SILR
Sbjct: 297 SMDAGNMLKPMLARGELHMIGATTLDEYRKHIESDAALERRFQPVTVEEPDVEDAISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E+ E HGVRIQD ALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 357 GLRERLEVFHGVRIQDSALVAAATLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D L RK +LEIE AL KE D ASK RL E+R+EL DLR + +++ E++ I +
Sbjct: 417 LDELTRKVTRLEIEEAALAKETDPASKTRLTELRRELADLRAEADAKRAQWEAERQAIHK 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLML 528
++ ++ + E +EAER YDL AA+LRYG + ++E + +L Q ++ L L
Sbjct: 477 LQEIRTELERARLEAEEAERNYDLNLAAELRYGRLADLERRLAAEEERLTAKQGEKRL-L 535
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRS 577
E V D+IA++V+ WTGIPV RL Q E+E R++G EA+ AV+++++R+
Sbjct: 536 REVVTEDEIADIVAAWTGIPVARLKQGEREKVLHLDEILRARVVGQEEAITAVSDAIIRA 595
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
R+G+ P++P GSF+FLGPTGVGKTELAKALA LFD EN ++R+DMSEY E+H+VSRL+
Sbjct: 596 RSGIRDPRRPIGSFIFLGPTGVGKTELAKALAASLFDSENAMIRLDMSEYQERHTVSRLL 655
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGY+G++EGGQLTEAVRR+PYSVVLFDEVEKAH +FNTLLQVLDDGR+TD QGRTV
Sbjct: 656 GAPPGYIGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDIFNTLLQVLDDGRITDSQGRTV 715
Query: 698 DFRNTVIIMTSNLGAEHLLSGMM-GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
DFRNTVIIMTSN+G+++LL G G + AR VL E+R HFRPE LNR+D+ V+F P
Sbjct: 716 DFRNTVIIMTSNIGSQYLLEGSAEGGTITEEARGMVLGELRAHFRPEFLNRVDDTVLFAP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L Q+ ++ L + + RLAE+ + L +T+ A ++ +DP+YGARP+RR++ V
Sbjct: 776 LGLAQIERIVDLLFQQLRQRLAEQQIELHLTEEARLLIAERGFDPVYGARPLRRYISHVV 835
Query: 817 VTELSRMLVREEIDENSTVYIDASPKGDNLV 847
T++ R L+R I+E + + S G+ LV
Sbjct: 836 ETQVGRALLRGSIEEGGVITVTVS--GNQLV 864
>gi|229171916|ref|ZP_04299483.1| Chaperone protein clpB 1 [Bacillus cereus MM3]
gi|228611550|gb|EEK68805.1| Chaperone protein clpB 1 [Bacillus cereus MM3]
Length = 866
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/874 (51%), Positives = 620/874 (70%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPA---STTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E+ + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEVGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I L + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLLTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRNLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L + E+E+L IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSKRVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLKADGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAREFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|423663845|ref|ZP_17639014.1| chaperone ClpB [Bacillus cereus VDM022]
gi|401295745|gb|EJS01369.1| chaperone ClpB [Bacillus cereus VDM022]
Length = 866
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/874 (51%), Positives = 625/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + ++ L +++ RA + D +++++ ++L
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEAGKLYVTSALQQLLVRAGKEAEKLRDDYISIEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFAKFYITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKDIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGVITDNSHVVVDV--ENNELVVHVK 866
>gi|315226312|ref|ZP_07868100.1| chaperone protein ClpB [Parascardovia denticolens DSM 10105 = JCM
12538]
gi|315120444|gb|EFT83576.1| chaperone protein ClpB [Parascardovia denticolens DSM 10105 = JCM
12538]
Length = 868
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/872 (52%), Positives = 611/872 (70%), Gaps = 39/872 (4%)
Query: 4 DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAE 63
+K+T EA+ A + A++AG+ Q PLHL +LL G+ + G + QS
Sbjct: 3 EKYTTLAQEALGDAIQSASAAGNPQVEPLHLLDSLLRQDGGVVRGLVQATGAD--PQSIG 60
Query: 64 RVFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-EDS 121
+A+ KLPS + + P S L +VI AQ KA D +++ + L++G+ D
Sbjct: 61 AQTRRALAKLPSASGSATAQPDGSRQLSQVIASAQKEMKALEDEYVSTEHLLIGIAASDG 120
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ G++ + AG +V ++ + ++RG G KV S + +++AL+ Y DL EQA GKLD
Sbjct: 121 EAGEILRHAGASVEALRKAIPQVRG--GAKVTSPDAEGSYKALEKYSTDLTEQAREGKLD 178
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQR+V GDVP+ L D +++
Sbjct: 179 PVIGRDSEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVAGDVPTGLRDKKIV 238
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LDM ++VAG+KYRGEFEER+KAVL E+++++G++I FIDEIH ++GAG TEGSMDA N+
Sbjct: 239 SLDMSSMVAGSKYRGEFEERMKAVLDEIKKSDGRIITFIDEIHTIVGAGATEGSMDAGNM 298
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 299 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTVAILRGLKQRYE 358
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS+PEEID L+R+
Sbjct: 359 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSEPEEIDELQRR 418
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D AS+ RL +++ EL D R+KL L R+ EK +++ L+ K
Sbjct: 419 VTRLEMEEMQLKKSQDTASQERLAKIQSELADTREKLAGLNARWSAEKAGHNKVGDLRAK 478
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVE--------------AAIGQLEGNQSDEN 525
++L +A R DL A+ + YG I ++ AA G +S +
Sbjct: 479 LDDLRVQADKATREGDLEHASRILYGEIPQIRKELAAAEDSASAETAATGA--DGESAQE 536
Query: 526 LMLTETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESV 574
M+ + V D IA +VS WTGIPV RL G+NEK +R+IG EAV AV+++V
Sbjct: 537 PMVPDHVDADSIASIVSSWTGIPVGRLMQGENEKLLHMEEVLGKRVIGQKEAVAAVSDAV 596
Query: 575 LRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVS 634
RSRAG+ +PT SFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVS
Sbjct: 597 RRSRAGISDLDRPTASFLFLGPTGVGKTELAKALADFLFDDEKAIVRIDMSEYMEKESVS 656
Query: 635 RLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQG 694
RLIGA PGY+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQG
Sbjct: 657 RLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQG 716
Query: 695 RTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVF 754
RTVDF+NT++I+TSNLG++ L+ + + A V+ V HF+PE LNRLD+++VF
Sbjct: 717 RTVDFKNTILILTSNLGSQFLVDSGLDADQRKSA---VMDAVHAHFKPEFLNRLDDMIVF 773
Query: 755 DPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEK 814
+PL+ ++L + +Q+ VA RL ER + L VTD+A + + YDP YGARP+RR ++
Sbjct: 774 NPLTRDELAGIVDIQVARVADRLKERRITLDVTDSAREWLADTGYDPAYGARPLRRLVQN 833
Query: 815 KVVTELSRMLVREEIDENSTVYIDASPKGDNL 846
+V +L+RML+ ++ + TV +D + GD+L
Sbjct: 834 EVGDQLARMLLAGQVHDGDTVLVDQT-GGDHL 864
>gi|302814603|ref|XP_002988985.1| hypothetical protein SELMODRAFT_159833 [Selaginella moellendorffii]
gi|300143322|gb|EFJ10014.1| hypothetical protein SELMODRAFT_159833 [Selaginella moellendorffii]
Length = 885
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/862 (50%), Positives = 613/862 (71%), Gaps = 29/862 (3%)
Query: 12 EAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA--QSAERVFNQA 69
+AI ++ E+A HL ALL +G+ + G +N +S ER F Q
Sbjct: 4 QAIVVSPEIAKENKQQIVETEHLMKALLEQKNGLARRVFGKVGVDNTGLLESTER-FIQR 62
Query: 70 MKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGD-LFK 128
K+ +T L ++ RA+ K GD++++++ L+LG L+D + G LFK
Sbjct: 63 QPKIVGETGGS---MLGRELEALLDRARGFMKDMGDSYVSIEHLLLGYLQDKRFGQVLFK 119
Query: 129 EAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDE 186
E + +++ VE +RG + KV S + ++AL YG+DL E A GKLDPVIGRD+
Sbjct: 120 EYQITAKALRTAVESIRGSQ--KVTDQSPEGKYEALDKYGKDLTEMARQGKLDPVIGRDD 177
Query: 187 EIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGAL 246
EIRR ++IL RRTKNNPV IGEPGVGKTA+ EGLAQRIV+GDVP L D +L++LDMGAL
Sbjct: 178 EIRRCIQILCRRTKNNPVFIGEPGVGKTAIAEGLAQRIVQGDVPEALMDRKLVSLDMGAL 237
Query: 247 VAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLAR 306
+AGAKYRGEFE+RLKAVLKEV E++G+++LFIDEIH V+GAG T G+MDA NL KPML R
Sbjct: 238 IAGAKYRGEFEDRLKAVLKEVSESDGRIVLFIDEIHTVVGAGATNGAMDAGNLLKPMLGR 297
Query: 307 GQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRI 366
G+LRCIGATTL+EYRKY+EKD A ERRFQQV+V +P+V DT+SILRGL+E+YE HHGVRI
Sbjct: 298 GELRCIGATTLDEYRKYIEKDPALERRFQQVFVDQPTVEDTISILRGLRERYELHHGVRI 357
Query: 367 QDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIE 426
D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+P +D ++R ++LE+E
Sbjct: 358 SDSALVAAALLSDRYISDRFLPDKAIDLVDEAAAKLKMEITSKPTHLDEIDRAVLKLEME 417
Query: 427 LHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREELLFA 486
+L+ + DKAS+ RL ++ EL+ L++K + + +++ EK + +I+ +K++ + +
Sbjct: 418 RLSLKNDTDKASRDRLDKLNVELEALKEKQKEVTQQWEHEKSVMLKIQSIKEEVDRVNLE 477
Query: 487 LQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGPDQIAEVVS 542
+Q+AER YDL RAA+L+YG++ +++E A L+ QS + ML E V D IAE+VS
Sbjct: 478 IQQAERDYDLNRAAELKYGSLMSLQRQLEVAEKNLDEYQSRGSSMLREEVTSDDIAEIVS 537
Query: 543 RWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQPTGSF 591
+WTGIPV++L Q+E E R++G AV AVA+++ RSRAGL P +P SF
Sbjct: 538 KWTGIPVSKLLQSEMEKLLHIDDELHKRVVGQEPAVQAVADAIQRSRAGLSDPNRPIASF 597
Query: 592 LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQ 651
+F+GPTGVGKTELAKALA LF+ E L+RIDMSEYME+H+VSRLIGAPPGYVG+EEGGQ
Sbjct: 598 MFMGPTGVGKTELAKALAAYLFNTEEALIRIDMSEYMEKHTVSRLIGAPPGYVGYEEGGQ 657
Query: 652 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLG 711
L+EAVRRRPYSVVLFDE+EKAH VFN LQ+LDDGR+TD QGR V F+N++IIMTSN+G
Sbjct: 658 LSEAVRRRPYSVVLFDEIEKAHSDVFNIFLQILDDGRVTDSQGRKVSFKNSIIIMTSNIG 717
Query: 712 AEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMK 771
++ +L+ + + + +D+V+ R++FRPE LNR+DE +VF PL EQ+ K+ +LQ+
Sbjct: 718 SQFILNSLEAGESYERMKDRVMDVARQNFRPEFLNRIDEYIVFKPLDREQINKIVKLQLA 777
Query: 772 DVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDE 831
V RL +R +++ ++++A+D++ YDP +GARP++R ++ +V +++ ++R + E
Sbjct: 778 RVQHRLKDRKISMTISESAVDLLGKMGYDPSFGARPVKRVVQHQVENPIAKGILRGDYKE 837
Query: 832 NSTVYIDA---SPKGDNLVYRV 850
+ T+ +DA +P D L R+
Sbjct: 838 DDTILVDAELVAPSEDVLQQRL 859
>gi|229084261|ref|ZP_04216544.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-44]
gi|228699061|gb|EEL51763.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-44]
Length = 868
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/874 (51%), Positives = 625/874 (71%), Gaps = 29/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + HL +ALL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEIDTAHLLLALLQQQDGLAVRIFQKMNVNIEQL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
+ ER+ ++K P+ T + E + + L +++ +A+A K D +++V+ ++L
Sbjct: 61 TKEVERL----VQKKPAVTGSGAEAGKVYVTNALQQLLVKAEAEAKKLKDEYISVEHILL 116
Query: 116 GLLE-DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E +S I LF + + + ++RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFCEENSDIKRLFTTFHITKNELLQSLMEVRGNQ--RVTSQNPEVTYEALEKYGRDLVAE 174
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
GK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP
Sbjct: 175 VKQGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAQWQKEKEEIYK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L+++ E L L+EAE YDL +AA+LR+G I +E + + E EN +L
Sbjct: 475 VRDLREQLERLRRELEEAEGNYDLNKAAELRHGKIPAMEKELREAEETGAGSGQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA +VSRWTGIPV +L G+ EK ER+IG EAV+ VA++VLR+R
Sbjct: 535 EEVSEEEIANIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVADAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQIIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ T+ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLQEDGTIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R +++ +T++A + V+ +DP+YGARP++R++++++
Sbjct: 775 TTTEIKGIVDKIVKELQGRLADRHISVELTESAKEFVVESGFDPMYGARPLKRYVQRQIE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDVDVENHELVVHVK 868
>gi|229016522|ref|ZP_04173463.1| Chaperone protein clpB 1 [Bacillus cereus AH1273]
gi|229022730|ref|ZP_04179254.1| Chaperone protein clpB 1 [Bacillus cereus AH1272]
gi|228738542|gb|EEL89014.1| Chaperone protein clpB 1 [Bacillus cereus AH1272]
gi|228744789|gb|EEL94850.1| Chaperone protein clpB 1 [Bacillus cereus AH1273]
Length = 866
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/874 (51%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++++ ++L
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLQDDYISIEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKVLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R++V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRERVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|385802257|ref|YP_005838660.1| ATP-dependent chaperone protein ClpB [Gardnerella vaginalis
HMP9231]
gi|333393814|gb|AEF31732.1| ATP-dependent chaperone protein ClpB [Gardnerella vaginalis
HMP9231]
Length = 864
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/867 (51%), Positives = 610/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + A +AG+AQ LHLA ALL G+ I AG + AE
Sbjct: 4 KFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIGAE- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-- 121
A+ LPS T + P AS L+ + +A+ + GD +++ + +++G++ +
Sbjct: 63 -IRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMRTMGDEYVSTEHMLIGIVASAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 122 AVADIFKKHNVSADALRKAVPTVRG--GAKVTSPDAEGNYKALEKYSVDMTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVLKE+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 240 SLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EYR+++EKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 300 LKPMLARGELRLVGATTLNEYREHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A+K RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDAAAKERLEKLQEELANSREKLTGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E ++ E + PDQ
Sbjct: 480 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESQAANAKSEAKEPMVPDQVDA 539
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 540 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIRAIADAVRRSRAGIAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 600 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDE+EKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 660 IGYEEGGQLTEAVRRRPYSVVLFDEIEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PLS E+L
Sbjct: 720 LIMTSNLGSQFLVQEGLDD---DAKRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELG 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ VA RL++R ++L V+D+A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 777 GIVDIQVRQVAARLSDRRISLDVSDSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 836
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + V D D++ ++
Sbjct: 837 LLSGKVHDGARVVADCENTSDHVTLKI 863
>gi|294497454|ref|YP_003561154.1| ATP-dependent chaperone ClpB [Bacillus megaterium QM B1551]
gi|294347391|gb|ADE67720.1| ATP-dependent chaperone ClpB [Bacillus megaterium QM B1551]
Length = 867
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/874 (50%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K E + A A + HL L+ GI + +++ ++ Q
Sbjct: 1 MDINKMTQKLQEGVMEAQSEAIKRNQQEVDIAHLLYTLIHQQDGIAPRILDHLHIDH--Q 58
Query: 61 SAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S ++ NQ + K P+ T + E + + L ++ +AQ D +++V+ + L L
Sbjct: 59 SFQQQVNQLLAKKPAVTGSGAEAGKVYITNKLQQLFVKAQEEASRLQDDYVSVEHIFLAL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
++ S+ G LF G+ ++ + LRG + ++ S + + T++AL YGRDLV +
Sbjct: 119 AQEPSSSEYGKLFSSHGITKKALQDVLTSLRGNQ--RITSQNPEVTYEALAKYGRDLVAE 176
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AG +DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP
Sbjct: 177 VRAGNIDPVIGRDGEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRRDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + +LDMGALVAGAK+RGEFEERLKAVL+EV+++ G+++LFIDE+H ++GAGRT+G
Sbjct: 237 LKDKTIFSLDMGALVAGAKFRGEFEERLKAVLQEVKKSNGQILLFIDELHTIVGAGRTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQQV V EPSV DT+SILR
Sbjct: 297 AMDAGNILKPMLARGELHCIGATTLDEYRQYIEKDPALERRFQQVLVEEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHGV I DRA+V AA +S RYI+ R LPDKAIDL+DEACA +R ++DS P E
Sbjct: 357 GLKERFEIHHGVNIHDRAIVSAAVMSDRYISDRFLPDKAIDLIDEACATIRTEIDSMPSE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+AS RL +RKE+ DL+++ + ++++KEK+ I
Sbjct: 417 LDEVTRRVMQLEIEEAALSKETDQASTTRLEAIRKEVSDLKERADTMKLQWEKEKQSIQT 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
++ ++++ E+ L+EAE +YDL +AA+LR+G I +E + QLE ++ EN +L
Sbjct: 477 VQDVREQLEKAKRDLEEAEGKYDLNKAAELRHGRIPALEKELKQLEETAAEKTQENRLLR 536
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSR 578
E V ++IAE+V RWTGIPV++L + E+E+L IG EAV+ V ++V+R+R
Sbjct: 537 EEVTEEEIAEIVGRWTGIPVSKLVEGEREKLLKLESILQQRVIGQDEAVSLVTDAVIRAR 596
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA LFD E +VRIDMSEYME+H+VSRLIG
Sbjct: 597 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAHSLFDSEEQMVRIDMSEYMEKHAVSRLIG 656
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR TD +G+ +D
Sbjct: 657 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNVLLQILDDGRATDSKGKVID 716
Query: 699 FRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
F+NTVIIMTSN+G++ LL G+ G++T + AR+QV+ ++R+HFRPE LNR+D+ ++F P
Sbjct: 717 FKNTVIIMTSNIGSQFLLDGLTSEGEIT-EKAREQVMAQLRQHFRPEFLNRVDDTILFKP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L+ +++ + + + RL++R ++L +T+ A + + A +DP+YGARP++R+++K +
Sbjct: 776 LTVHEVKGIIDKLLLQLEKRLSDRHISLTLTEEAKNYIAASGFDPVYGARPLKRFIQKYI 835
Query: 817 VTELSRMLVREEIDENSTVYIDASPKGDNLVYRV 850
T+++R L+ +I++ S V +D K D V V
Sbjct: 836 ETKIARELIAGKIEDYSQVTVDV--KDDEFVVSV 867
>gi|260431823|ref|ZP_05785794.1| ATP-dependent chaperone ClpB [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415651|gb|EEX08910.1| ATP-dependent chaperone ClpB [Silicibacter lacuscaerulensis
ITI-1157]
Length = 872
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/857 (52%), Positives = 598/857 (69%), Gaps = 20/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT + + A +A GH + P H+ AL+ D G+ + I AGG A +
Sbjct: 1 MDLNKFTERARGFVQAAQTIALREGHQRLAPEHILKALMDDDQGLASNLIKRAGG--APE 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-LE 119
+ A+ K+P + ++ KV+ A+ K GD+ + V+++++ L +
Sbjct: 59 RVVEALDVALAKIPKVSGDAGQVYLDGQTAKVLDEAEKIAKKAGDSFVPVERVLMALCIV 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
S+ + + V+ ++ + +R +GR +SA+ + + ALK Y RDL E A GK
Sbjct: 119 KSKAKEALEAGAVSAQKLNEAINDIR--KGRTADSANAEEGYDALKKYARDLTEAAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DP+IGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D +
Sbjct: 177 IDPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKK 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ALDMGAL+AGAKYRGEFEERLKAVL EV A G++ILFIDE+H ++GAG+++G+MDAA
Sbjct: 237 LLALDMGALIAGAKYRGEFEERLKAVLNEVTAAAGEIILFIDEMHTLVGAGKSDGAMDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L CIGATTL+EYRKYVEKDAA RRFQ VYV EP+V DT+SILRG+KEK
Sbjct: 297 NLIKPALARGELHCIGATTLDEYRKYVEKDAALARRFQPVYVQEPTVEDTISILRGIKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA A +R+++DS+PEE+D L+
Sbjct: 357 YELHHGVRISDSALVSAATLSHRYITDRFLPDKAIDLVDEAAARLRMEVDSKPEELDQLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL+IE AL+ E D ASK RL ++KEL +L++K + +++ E++++ R LK
Sbjct: 417 RQILQLQIEEEALKLEDDAASKDRLEALQKELAELKEKSAEMTAQWQAERDKLASARELK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
++ ++ L+ A+R +LA+A +L YG I E+E + + E +S+ L ETV P+QI
Sbjct: 477 EQLDKARAELEIAKREGNLAKAGELSYGVIPELERKLAEAESQESNSALA-KETVRPEQI 535
Query: 538 AEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
A VV RWTGIP +++ + E+E R++G EAV AVA +V R+RAGL +
Sbjct: 536 AAVVERWTGIPTSKMLEGEREKLLRMEEALHARVVGQDEAVRAVANAVRRARAGLNDENR 595
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KA+AE LFDDE+ +VRIDMSE+ME+H+V+RLIGAPPGYVG+
Sbjct: 596 PLGSFLFLGPTGVGKTELTKAVAEYLFDDEHAMVRIDMSEFMEKHAVARLIGAPPGYVGY 655
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDG LTDGQGRTVDF+ T+I++
Sbjct: 656 EEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVL 715
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L G T Q RD V+ VR HFRPE LNRLDE ++FD L + +
Sbjct: 716 TSNLGSQALSQLPEGADTAQAKRD-VMDAVRAHFRPEFLNRLDETIIFDRLQRSDMAAIV 774
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q+ + RLA R + L + +AA + + E YDP++GARP++R +++ + L+ L+
Sbjct: 775 DIQLARLQKRLAARKIRLELDEAAKEWLANEGYDPVFGARPLKRVIQRALQNPLAEALLA 834
Query: 827 EEIDENSTVYIDASPKG 843
EI + TV + A P G
Sbjct: 835 GEIRDGDTVPVTAGPDG 851
>gi|384179203|ref|YP_005564965.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|324325287|gb|ADY20547.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 866
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/861 (52%), Positives = 617/861 (71%), Gaps = 29/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
+ AE + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KEGAENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLGEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYID 838
T+L+R L+ I +NS V +D
Sbjct: 835 TKLARELIAGTITDNSHVVVD 855
>gi|432334057|ref|ZP_19585778.1| ATP-dependent chaperone ClpB, partial [Rhodococcus wratislaviensis
IFP 2016]
gi|430779024|gb|ELB94226.1| ATP-dependent chaperone ClpB, partial [Rhodococcus wratislaviensis
IFP 2016]
Length = 869
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/854 (53%), Positives = 600/854 (70%), Gaps = 29/854 (3%)
Query: 9 KTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA--QSAERVF 66
K+ EA+ A +AT GH + HL +AL+ G+ + + AG A ER
Sbjct: 1 KSREALQEAQNVATRMGHTEVDGEHLLLALIDQQEGLVPRLLEQAGANVDALRSDLEREL 60
Query: 67 NQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED---SQI 123
++ K+ P ++ + L K++ A+ K D++++V+ L++ L E+ S
Sbjct: 61 SR-RPKVSGPGATPGQVTITQRLAKLLDAAEREAKRLKDSYVSVEHLVMALSEEGSASAA 119
Query: 124 GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AGKLDPV 181
G + GV + + K+RG + +V SA+ + ++AL+ YGRDLV + AGKLDPV
Sbjct: 120 GRVLASHGVTREAFLTALTKVRGNQ--RVTSATPEGAYEALEKYGRDLVSEGRAGKLDPV 177
Query: 182 IGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIAL 241
IGRD EIRRV +ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP L D + +L
Sbjct: 178 IGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGLRDKTIFSL 237
Query: 242 DMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT--EGSMDAANL 299
DMG+LVAGAKYRGEFEERL+AVL EV+ AEG+++LF+DE+H V+GAG EGS+DA N+
Sbjct: 238 DMGSLVAGAKYRGEFEERLQAVLSEVKAAEGRILLFVDELHTVVGAGSVGGEGSLDAGNM 297
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+L IGATTL+EYRK++E DAA ERRFQ V V EPS D +SILRGL+E+ E
Sbjct: 298 LKPMLARGELHMIGATTLDEYRKHIESDAALERRFQTVLVDEPSAEDAISILRGLRERLE 357
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HGV+IQD ALV A LS RYIT R LPDKAIDLVDEACA +R ++DS P E+D L RK
Sbjct: 358 VFHGVKIQDGALVAAVTLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAELDELTRK 417
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LEIE AL KE D ASKARL E+RKEL DLR + +++ E++ I ++ L+ +
Sbjct: 418 VTRLEIEEAALSKETDAASKARLEELRKELADLRAEADARHAQWEAERQAIRRVQELRGE 477
Query: 480 REELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGPD 535
E L +EAER YDL RAA+LRYG I + +EAA QL Q N +L E V D
Sbjct: 478 LERLRHEAEEAERNYDLNRAAELRYGEITALERRLEAAEEQLATRQG-RNPLLREVVTED 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRP 584
+IAE+V+ WTGIPV RL + E+E R++G EAV VA++V+R+R+G+ P
Sbjct: 537 EIAEIVAAWTGIPVARLQEGEREKLLKLDEILHERVVGQDEAVQLVADAVIRARSGIRDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
++P GSF+FLGPTGVGKTELAK LA LFD E+ +VR+DMSEY E+H+VSRLIGAPPGYV
Sbjct: 597 RRPIGSFIFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQVLDDGR+TD QGR VDFRNTVI
Sbjct: 657 GYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVI 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IMTSN+G++HLL G+ ++ AR++VL E+R HFRPE LNR+D+IV+F PL+ Q+
Sbjct: 717 IMTSNIGSQHLLDGVTADGEIKPDARERVLAELRGHFRPEFLNRVDDIVLFTPLTLPQIE 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ LQ+ D+ RL+ER + L +T A ++ +DP+YGARP+RR++ +V T++ R
Sbjct: 777 HIVELQLTDLRNRLSERQIHLDITPEARRLIAEHGFDPVYGARPLRRYIAHEVETKIGRA 836
Query: 824 LVREEIDENSTVYI 837
L+R EI+ T+ +
Sbjct: 837 LLRGEIEPGGTIAV 850
>gi|429770225|ref|ZP_19302298.1| ATP-dependent chaperone protein ClpB [Brevundimonas diminuta 470-4]
gi|429185062|gb|EKY26052.1| ATP-dependent chaperone protein ClpB [Brevundimonas diminuta 470-4]
Length = 861
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/857 (51%), Positives = 602/857 (70%), Gaps = 19/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN D ++ + +A+ A LA + H QF P HL LL + G+ + I+ AGG+ +A
Sbjct: 1 MNLDLYSDRAKQAVQSAQSLALARRHQQFAPEHLLKVLLEERDGLARKLIDQAGGDPSA- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-E 119
E V +KK P ++ +V A+ A K GD + ++L+ + E
Sbjct: 60 -VELVTEGLLKKRPQVEGGSGQLYLDGDTARVFSAAEEAAKKAGDAFVTTERLLAAIAKE 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ K AGV ++ V ++R +G+ +SA + +F ALK Y RDL E A GK
Sbjct: 119 GGGAAEALKSAGVTAKKLDDAVAEIR--KGKTADSAGAEDSFDALKRYARDLTEAARDGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DPVIGRDEEIRR +++L+RRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D +
Sbjct: 177 VDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKK 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+++LDMGAL+AGAKYRGEFEERLKAVL EV AEG+++LFIDE+H ++GAG+ +G+MDA+
Sbjct: 237 VLSLDMGALIAGAKYRGEFEERLKAVLNEVAAAEGQIVLFIDEMHTLVGAGKGDGAMDAS 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRGLKEK
Sbjct: 297 NLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA + VR+ +DS+PE +D ++
Sbjct: 357 YEVHHGVRISDSAIVAAATLSNRYITDRFLPDKAIDLIDEAASRVRMAVDSKPEALDEID 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL+IE AL+KE D ASK RL ++ E+ DL + + R+K EK+++ + +L+
Sbjct: 417 RRLVQLKIEREALKKESDSASKQRLEKLEDEIADLEGQSDDMTARWKSEKDKVGQGAQLR 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ + L L A+R DL RA+++ YG I ++E + + E + + E V +QI
Sbjct: 477 ETLDRLRAELAAAQRAGDLGRASEIAYGQIPQLEKQLAEDEAPAAVAAPLTPEVVDAEQI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
A VVSRWTG+PV ++ + E+E R++G EA+ AV+++V R+RAGL P +
Sbjct: 537 AAVVSRWTGVPVDKMLEGEREKLLKMEDELGRRVVGQDEALAAVSDAVRRARAGLNDPNK 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA LFDD+N + RIDMSEYME+HSVSRLIGAPPGYVG+
Sbjct: 597 PLGSFLFLGPTGVGKTELTKALAGYLFDDDNAITRIDMSEYMEKHSVSRLIGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
+EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRT+DF+NT+IIM
Sbjct: 657 DEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTIDFKNTLIIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG+++L G+ ++ R V+++VR HFRPE LNR+DEI++F L EQ+ +
Sbjct: 717 TSNLGSQYLADQPEGE-DVEAVRPLVMEQVRAHFRPEFLNRIDEIILFHRLGREQMGGIV 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
R+Q+ + +A+R + LA+ D+AL + + YD +YGARP++R ++K++V +++ L+
Sbjct: 776 RIQLARLEKLMADRRLTLALDDSALTWLADKGYDSVYGARPLKRVIQKELVDPMAKKLLA 835
Query: 827 EEIDENSTVYIDASPKG 843
EI++ S V + A G
Sbjct: 836 GEIEDGSVVAVSAGADG 852
>gi|373459155|ref|ZP_09550922.1| ATP-dependent chaperone ClpB [Caldithrix abyssi DSM 13497]
gi|371720819|gb|EHO42590.1| ATP-dependent chaperone ClpB [Caldithrix abyssi DSM 13497]
Length = 872
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/867 (52%), Positives = 611/867 (70%), Gaps = 29/867 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K EA+A A L T G Q P H+ ALLSD G+ AQAI G Q
Sbjct: 1 MNLEKFTIKAQEALAEAQRLVTEYGQQQIEPEHILKALLSDSEGV-AQAIVKKYGVPLPQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
+++ QA+ K P + ++ S +++ A +A D ++ + L+L + E
Sbjct: 60 LDQKL-EQAIDKFP-RVSGGGQVYLSRRANEILNNAFNEARALKDEFVSTEHLLLAISEE 117
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
D + G + G+ + + ++RG + +V + + +QAL+ Y RDL E A G
Sbjct: 118 KDGEAGRILASFGLTREMILRALMEIRGNQ--RVTDQNPEAKYQALERYARDLTELARKG 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRRV+++LSRRTKNNPVLIG+PGVGKTA+VEG+A RIV GDVP NL D
Sbjct: 176 KLDPVIGRDEEIRRVLQVLSRRTKNNPVLIGDPGVGKTAIVEGIAHRIVNGDVPENLKDK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL+ALD+G+L+AGAK+RGEFEERLKAV+KE+ EAEGK+ILFIDE+H ++GAG EG++DA
Sbjct: 236 RLVALDIGSLIAGAKFRGEFEERLKAVIKEITEAEGKIILFIDELHTIVGAGAAEGAVDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+N+ KP LARG+L IGATTL+EYRKY+EKDAA ERRFQ V + EPSV DT+SILRGLKE
Sbjct: 296 SNMIKPALARGELHTIGATTLDEYRKYIEKDAALERRFQPVLIDEPSVEDTISILRGLKE 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI+D ALV AA LS RYI R LPDKAIDL+DEA + +R+++DS PEE+D++
Sbjct: 356 KYEVHHGVRIKDSALVAAAVLSKRYINDRFLPDKAIDLIDEAASKLRIEIDSMPEELDDV 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER+ QLEIE+ AL+KE D+ASK RL +++E +L +K + L ++K EKE I +IR L
Sbjct: 416 ERRLKQLEIEMMALKKENDEASKKRLELIKEEKANLEEKAKQLRAQWKAEKETIQQIREL 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTETVG 533
K K EE ++ AER L R A++RY I + E I QL ++ E ML E V
Sbjct: 476 KSKIEEYKTQMEIAEREGQLDRVAEIRYSLIPQAEKEIEQLNAKLAEIQKERPMLKEEVE 535
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
+ IAE+VSRWTGIPV R+ ++EKE+L +G EA+ AVA++V RSRAGL
Sbjct: 536 EEDIAEIVSRWTGIPVQRMLESEKEKLLKMEDRLRKRVVGQEEAIRAVADAVRRSRAGLA 595
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
+P GSF+FLG TGVGKTELAKALAE LFDDEN ++RIDMSEYME+HSVSRLIG+PPG
Sbjct: 596 DQNRPIGSFIFLGSTGVGKTELAKALAEFLFDDENAMIRIDMSEYMERHSVSRLIGSPPG 655
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTE VRR+PYSVVL DE+EKAH VFN LLQVL+DGRLTD +GRTVDF+NT
Sbjct: 656 YVGYEEGGQLTEQVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDNKGRTVDFKNT 715
Query: 703 VIIMTSNLGAEHL------LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
+IIMTSNLGA ++ ++ + T + R V++ +++ RPE LNR+D+I+VF P
Sbjct: 716 IIIMTSNLGAGYIREKSENITQEKLEETYEEIRKNVIEFLKQSLRPEFLNRIDDIIVFRP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L+ E ++++ RLQ + + L ++ ++ + ++A++ ++ + YDP +GARP++R ++K++
Sbjct: 776 LNKEDMKQIVRLQFERIKKMLEQQDLSAELDESAVEYLVNKGYDPAFGARPLKRLMQKEL 835
Query: 817 VTELSRMLVREEIDENSTVYIDASPKG 843
V EL++ ++ + TV I A+ G
Sbjct: 836 VNELAKEVIAGNLAPGDTVVISANEHG 862
>gi|366163395|ref|ZP_09463150.1| ATP-dependent chaperone ClpB [Acetivibrio cellulolyticus CD2]
Length = 864
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/861 (51%), Positives = 613/861 (71%), Gaps = 31/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DKFT K E I+ + E+A GH Q H+ +A+L+ G+ + ++ G
Sbjct: 1 MNIDKFTEKAQEVISSSQEIAIRLGHQQVDGEHIHLAMLNQDDGLIPKLVSYMGINTQIY 60
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ + +++LP + A+ +++ RA+ K D + V+ + + LL+
Sbjct: 61 IND--LEKELERLPKVYGSGATSMYATRRFNEILIRAEDEAKKFKDDYTGVEHIYIALLK 118
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D+ +FK G+ + + + + K+R + ++ + + + T+ ALK +GRDLVE A
Sbjct: 119 EKDTPSHSIFKRYGINLEKFMAALSKVRSNQ--RITTKNPEETYDALKRFGRDLVELARQ 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GK+DPVIGRD EIRR +RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRI++GDVP L D
Sbjct: 177 GKVDPVIGRDAEIRRAIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKGDVPEGLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ ALD+GAL+AGAKYRGEFEERLKAVL +V ++ G++ILFIDE+H ++GAG+ EG+MD
Sbjct: 237 KTIFALDLGALIAGAKYRGEFEERLKAVLNDVNKSNGRIILFIDELHNIVGAGKAEGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYRKY+EKDAA ERRFQ + V +P+V DT+SILRGLK
Sbjct: 297 AGNILKPMLARGELHCIGATTLDEYRKYIEKDAALERRFQPILVDQPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E++E HHGVRI D A++ A LS RYI+ R LPDKAIDL+DEA A +R ++DS P E+D
Sbjct: 357 ERFEIHHGVRITDNAIIACAVLSNRYISDRFLPDKAIDLMDEAAAMIRTEIDSMPTELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ R+ MQLEIE AL KE+D +SK RL + KE+ L+D+ + +++ EK+ I +
Sbjct: 417 ISRRIMQLEIERQALRKEEDISSKERLGVLEKEIASLKDRADTMKAQWELEKQNIKREKD 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQ-----SDENLMLTE 530
LKQ+ E++ ++EAER YDL + A L++G + ++E QLE + S+ N +L E
Sbjct: 477 LKQQIEDIKRQIEEAERNYDLDKLAVLKHGKMPDLEK---QLESEKQRIKSSEANSLLKE 533
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRA 579
V ++IAE+VSRWTGIPVTRL +NEK+ R+IG EAV AV++SV+R+R+
Sbjct: 534 EVTEEEIAEIVSRWTGIPVTRLVENEKDKLLNLEEILHKRVIGQDEAVCAVSDSVIRARS 593
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL ++P GSF+FLGPTGVGKTELAKAL+E LFD E +VRIDMSEYME+HSV+RLIGA
Sbjct: 594 GLKDLRKPIGSFIFLGPTGVGKTELAKALSEALFDTEENVVRIDMSEYMEKHSVARLIGA 653
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR+PY V+LFDE+EKAH VFN LLQ+LDDGRLTD QGRTV+F
Sbjct: 654 PPGYVGYEEGGQLTEAVRRKPYCVILFDEIEKAHPEVFNVLLQLLDDGRLTDSQGRTVNF 713
Query: 700 RNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NTV+IMTSN+G++HLL+ + G++ + AR++V+ E+ +HF+PE LNR+DEIV+F PL
Sbjct: 714 KNTVVIMTSNIGSQHLLNNISRDGEIGDK-ARNEVMNELNRHFKPEFLNRVDEIVLFKPL 772
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
E++ ++ L + + RL +R + L VTD A + SY P+YGARP++R+L+K V
Sbjct: 773 RKEEIIRIIDLALAGIQRRLDDRHIRLNVTDRAKAFMAESSYTPVYGARPVKRYLQKFVE 832
Query: 818 TELSRMLVREEIDENSTVYID 838
TE+ +M+++ + + + ID
Sbjct: 833 TEIGKMIIKGTLSDRMEIKID 853
>gi|160931448|ref|ZP_02078844.1| hypothetical protein CLOLEP_00281 [Clostridium leptum DSM 753]
gi|156869513|gb|EDO62885.1| ATP-dependent chaperone protein ClpB [Clostridium leptum DSM 753]
Length = 874
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/862 (51%), Positives = 610/862 (70%), Gaps = 30/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EAI A +A Q HL ALL G+ Q + G + A
Sbjct: 1 MNAQKFTQKSLEAIQEAQNIALEHNSMQIEQEHLVCALLEQKDGLIPQLMKKMGTDPDAL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHG---DTHLAVDQLILGL 117
Q ++ LP T E V + AA++ G D +++V+ +++ +
Sbjct: 61 L--HAVEQRIEGLPGVTGPGRESGKIYVSGDVDQNLAAAEREAGRMKDEYVSVEHIMMAV 118
Query: 118 LEDSQIG--DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
LE G +F++ GV + S + +RG +V S + + T+ +L YG+DLVE A
Sbjct: 119 LEKPNTGMSRIFQQFGVTKDQFLSVLATVRG--NTRVTSDTPEETYDSLSKYGQDLVELA 176
Query: 176 G--KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+ EGLA RIVRGDVP+NL
Sbjct: 177 KNHKLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAIAEGLALRIVRGDVPNNL 236
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +L +LDMG+L+AGAK+RGEFEERLKAVL EV+++EGK+ILFIDE+H ++GAG+TEGS
Sbjct: 237 KDRKLFSLDMGSLIAGAKFRGEFEERLKAVLGEVKKSEGKIILFIDELHTIVGAGKTEGS 296
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KP+LARG+L CIGATTL+EYR+Y+EKD A ERRFQ V V EPSV DT+SILRG
Sbjct: 297 MDAGNLLKPLLARGELHCIGATTLDEYRQYIEKDPALERRFQPVLVDEPSVADTISILRG 356
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HGV+IQD+AL+ AA LS RYI+ R LPDKAIDLVDEACA VR ++DS P E+
Sbjct: 357 LKERYEVFHGVKIQDQALIAAATLSNRYISDRFLPDKAIDLVDEACAMVRTEIDSMPTEL 416
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D + RK MQLEIE AL+KE D S+ L E++KEL +LR + + + +++ EKE I ++
Sbjct: 417 DEISRKIMQLEIEEAALKKETDALSQEHLQELQKELAELRSQFKEMKAKWENEKEAIGKV 476
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQ----LEGNQSDENLMLT 529
++L+++ +++ +++AER YDL + A+L+YG + ++ + + E QS+ +L L
Sbjct: 477 QKLREEIDQVNGEIEKAERSYDLNKLAELKYGRLPALQKELQEEERIAEEGQSNASL-LH 535
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSR 578
+ V ++IA++V RWTGIPV++L + E+ +R+IG EAV V E++LRSR
Sbjct: 536 DKVTEEEIAKIVGRWTGIPVSKLMEGERDKLLRLEDILHQRVIGQDEAVEKVTEAILRSR 595
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDM+EYME++SVSRL+G
Sbjct: 596 AGIQDPDRPIGSFLFLGPTGVGKTELAKALAQTLFDDERNMVRIDMTEYMEKYSVSRLVG 655
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVD
Sbjct: 656 APPGYVGYEEGGQLTEAVRRHPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVD 715
Query: 699 FRNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
F+NT+II+TSNLG+ ++L G+ G+++ + AR V +++ FRPE LNRLD+IV + P
Sbjct: 716 FKNTIIILTSNLGSNYILEGINEKGEISGE-ARTMVDGLLKQQFRPEFLNRLDDIVFYKP 774
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L+ +++ ++ L + D+ RL E+ + + +T AA D V+ YDP+YGARP+RR+L+ KV
Sbjct: 775 LTKDEITRIVDLMIADLQKRLEEKQLTVELTQAAKDYVVDSGYDPVYGARPLRRFLQSKV 834
Query: 817 VTELSRMLVREEIDENSTVYID 838
T +++ ++ ++ + + +D
Sbjct: 835 ETAIAKAIISRDLRPRTHLVVD 856
>gi|311033365|sp|Q7WSY8.2|CLPB_PROFC RecName: Full=Chaperone protein ClpB
Length = 866
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/863 (52%), Positives = 599/863 (69%), Gaps = 24/863 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T + +A+ A LA + G+ P+HL A+L P A + G + A
Sbjct: 1 MDTEKLTTMSRDAVTAAVRLALTKGNPTAEPVHLLHAMLMVPESSVAPLLKAVGAD--AA 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ + A+ KLPS + + P S L +V+ A+ GD ++ + L++ L E
Sbjct: 59 RVDGAASAAIDKLPSSSGSSVAQPQLSGALARVLADAETRADKLGDQFVSTEHLLIALAE 118
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
DS ++ GV A ++ RG +++ SA + AL Y DL ++A G
Sbjct: 119 VDSDAKNILASNGVTTAALEKAFNDSRGD--KRITSAESEGGESALDKYSIDLTQRAKDG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIRRV ++LSRRTKNNPVLIGE GVGKTAVVEGLAQRIV+GDVP +L
Sbjct: 177 KLDPVIGRDSEIRRVAQVLSRRTKNNPVLIGEAGVGKTAVVEGLAQRIVKGDVPDSLKGR 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL++LD+ ++VAGAKYRGEFEERLKAVL E++ AEG++I FIDE+H V+GAG +EGSMDA
Sbjct: 237 RLVSLDLASMVAGAKYRGEFEERLKAVLNEIKSAEGQIITFIDELHTVVGAGASEGSMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+N+ KP+LARG+LR IGATTL+EYR+++EKD A ERRFQQVYV EPSV DTV+ILRGL+E
Sbjct: 297 SNMLKPLLARGELRLIGATTLDEYREHIEKDPALERRFQQVYVGEPSVEDTVAILRGLRE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HH VRI D ALV AAQLS RYITGR LPDKAIDLVDEA + +R+++DS PEEID L
Sbjct: 357 RYEAHHKVRITDSALVAAAQLSHRYITGRQLPDKAIDLVDEAASRLRMEIDSSPEEIDTL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
R+ +L +E A+EKE+D SKARL + +L D +++L+ L R+ EKE ++++ L
Sbjct: 417 RRQVDRLTMEQFAVEKEEDPGSKARLARINSDLADAKEQLRGLEARWAAEKEGLNKVGEL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN--LMLTETVGP 534
K + + L + R DLA+A+++ YG I E+ + + + D M++E V
Sbjct: 477 KTRIDALRTEADKHTRDGDLAKASEILYGEIPELNKQLDEASAAEEDSQGKSMVSEEVTS 536
Query: 535 DQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D IAEVVS WTG+PV ++ G++EK +RL+G AV AV+++V RSRAG+
Sbjct: 537 DDIAEVVSAWTGVPVGKMLEGESEKLLDMENRIGKRLVGQQAAVKAVSDAVRRSRAGISD 596
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSF+FLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 597 PNRPTGSFMFLGPTGVGKTELAKALADFLFDDETAMVRIDMSEYMEKHSVSRLVGAPPGY 656
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRRRPYSVVL DE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRN +
Sbjct: 657 VGYEEGGQLTEAVRRRPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNVI 716
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ + M + + R+QV+ V+ HFRPE LNRLDEIV+FD LS E L
Sbjct: 717 LIMTSNLGSQFMADPSM---SPEERRNQVMAVVKDHFRPEFLNRLDEIVLFDELSREDLD 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
K+ + + + RLAER +++ V+ AA + + YDP+YGARP+RR ++ V +L+R
Sbjct: 774 KIVDISLDKLNRRLAERRISIDVSAAAREWLARTGYDPVYGARPLRRLIQTTVEDQLARA 833
Query: 824 LVREEIDENSTVYIDASPKGDNL 846
++ I ++ V +D + GD +
Sbjct: 834 MLAGTISDDQKVSVDMNQAGDGV 856
>gi|337287439|ref|YP_004626912.1| ATP-dependent chaperone ClpB [Thermodesulfatator indicus DSM 15286]
gi|335360267|gb|AEH45948.1| ATP-dependent chaperone ClpB [Thermodesulfatator indicus DSM 15286]
Length = 872
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/867 (50%), Positives = 610/867 (70%), Gaps = 26/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M +KFT K+ +AI A LA + GH HL AL+ G+ ++ G N
Sbjct: 1 MRLEKFTFKSQDAIQEAQRLAETRGHQNMEVEHLLKALVEQEGGLVPMILDRLGINNKLI 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
+++ ++ + K+PS + ++ S L +V+ RA D +++ + L+L +LE
Sbjct: 61 ASD--VDEVLDKIPSVSGTGYQVYLSPNLKQVLERAMRIAAEMRDDYVSTEHLLLAILES 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGK 177
++ + K+ G+ + + ++R +G++V + + +QAL+ +GRDL + +AGK
Sbjct: 119 NTPSAQILKKRGITKENLMEVINQIR--KGQRVTDQNPEDKYQALEKFGRDLTALAKAGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRV++ILSRRTKNNPVL+GEPGVGKTA+VEGLAQRIV GDVP L + R
Sbjct: 177 LDPVIGRDEEIRRVIQILSRRTKNNPVLVGEPGVGKTAIVEGLAQRIVSGDVPEPLKNKR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+I LD+GAL+AGAKYRGEFEERLKAVLKEV E+EG++ILFIDEIH ++GAG EG+MDAA
Sbjct: 237 IIQLDVGALLAGAKYRGEFEERLKAVLKEVTESEGEIILFIDEIHTIVGAGAAEGAMDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L CIGATT++EYRKY+EKD A ERRFQ VYV EPSV + ++ILRGLKEK
Sbjct: 297 NMLKPALARGELHCIGATTIDEYRKYIEKDPALERRFQPVYVEEPSVEEAIAILRGLKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
+E HHGVRI D A+V A QLSARYIT R+LPDKAIDL+DEA A +R++++S P EID +E
Sbjct: 357 FEVHHGVRITDSAIVAAVQLSARYITDRYLPDKAIDLIDEAAAKLRIEIESMPTEIDEIE 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK QLEIE ALE+E D + R ++ K+L++LR KL+ + +++KEKE I +IR +K
Sbjct: 417 RKIKQLEIERMALERETDPRAVERREKIEKQLEELRKKLEEMKAQWQKEKEIIQKIRAIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVG 533
+K ++L Q+AER+ DL + A++ YG I +E+E +LE Q + L E V
Sbjct: 477 EKIDQLRIEAQQAERQGDLNKVAEIIYGRIPQLEKELEEWNKKLEELQKEGKSFLKEEVT 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLG 582
+ IAEVV++WTGIPVTRL ++E+E+L+ + E A+ A+A +V R+RAGL
Sbjct: 537 AEDIAEVVAKWTGIPVTRLLESEREKLLKMEERLAQRVVGQDHAIKAIANAVRRARAGLK 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTELAKALAE +FD E L+R DMSEYME+H+VS+LIGAPPG
Sbjct: 597 DPNRPIGSFMFLGPTGVGKTELAKALAEFMFDTEEALIRFDMSEYMEKHAVSKLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTD +GRTV+F+NT
Sbjct: 657 YVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVNFQNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IIMTSN+G+ ++ M + A V+ VR HFRPE LNR+DEI++F+ L+ EQL
Sbjct: 717 IIIMTSNIGSHYV----MELEDRKDAERLVMDAVRSHFRPEFLNRIDEIIIFNKLTKEQL 772
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+K+ +Q++ + RL ++ + + +TD A + + YDP+YGARP++R +++ + L+
Sbjct: 773 KKIVDIQIRYLQQRLEDKHITIELTDRAKEWLAEVGYDPVYGARPLKRAIQRYIEDPLAV 832
Query: 823 MLVREEIDENSTVYIDASPKGDNLVYR 849
++ E + +D L +R
Sbjct: 833 KILEGTFQEGDHILVDYDETKGGLDFR 859
>gi|85373114|ref|YP_457176.1| ATP-dependent Clp protease [Erythrobacter litoralis HTCC2594]
gi|84786197|gb|ABC62379.1| ATP-dependent Clp protease [Erythrobacter litoralis HTCC2594]
Length = 859
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/860 (52%), Positives = 600/860 (69%), Gaps = 34/860 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + + A +A H + TP HL A++ DP G+ + I AGG +
Sbjct: 1 MNLEKFTDRAKGFLQAAQTVAIRMSHQRITPAHLLKAMIEDPEGMASGLIARAGGN--PR 58
Query: 61 SAERVFNQAMKKLPS-------QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQL 113
+ E + A+ K+P+ QTP D ++++ +A+ GD+++ +++L
Sbjct: 59 TVEDEVDAALGKIPAVSGGGAQQTPGLD-----NDTVRILDQAETIADKSGDSYVTIERL 113
Query: 114 I--LGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL 171
+ L L + G K A V +++E+ +LRG GR +SA+ + + A+K Y RDL
Sbjct: 114 LVALALATTTSAGQALKAANVDAKTLEAEISELRG--GRTADSANAEEAYDAMKKYARDL 171
Query: 172 VEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDV 229
E A GKLDPVIGRDEEIRR ++IL+RRTKNNP LIG+PG GKTA+ EGLA RI GDV
Sbjct: 172 TEAAREGKLDPVIGRDEEIRRTIQILARRTKNNPALIGDPGTGKTAIAEGLALRIANGDV 231
Query: 230 PSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGR 289
P +L L++LDMG+L+AGAKYRGEFEERLKAVL EV+ A+G++ILFIDE+H ++GAG
Sbjct: 232 PDSLKGRTLMSLDMGSLIAGAKYRGEFEERLKAVLDEVKGADGQIILFIDEMHTLIGAGA 291
Query: 290 TEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVS 349
+EGSMDA+NL KP L+RG+L CIGATTL+EY+KYVEKD A +RRFQ VY+ EPSV DT+S
Sbjct: 292 SEGSMDASNLLKPALSRGELHCIGATTLDEYQKYVEKDPALQRRFQSVYIDEPSVEDTIS 351
Query: 350 ILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQ 409
ILRG+ EKYE HHGV I D ALV AA+LS RYI R LPDKAIDL+DEA + +R++++S+
Sbjct: 352 ILRGIAEKYELHHGVNITDGALVAAARLSDRYIQNRFLPDKAIDLMDEAASRIRMEVESK 411
Query: 410 PEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKER 469
PEEI+NL+R+ +QL+IE ALEKE D ASK RL +RKEL +L K L R++ E+++
Sbjct: 412 PEEIENLDRRIIQLKIEEQALEKETDSASKDRLETLRKELSELEQKSSELTTRWQNERDK 471
Query: 470 IDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT 529
I R+K++ ++ L++AER DLA+A +L YG I E+E + E + EN +L
Sbjct: 472 IQGETRIKEELDQARIELEQAERSGDLAKAGELSYGRIPELEKKLE--EARATTENALLK 529
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSR 578
E V D IA VVSRWTGIP+ ++ + E+++L IG E + AV+++V R+R
Sbjct: 530 EEVTEDDIASVVSRWTGIPIDKMLEGERDKLLKMEELLSKRVIGQEEPIIAVSKAVRRAR 589
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P GSFLFLGPTGVGKTEL KALA LFDD++ +VRIDMSE+ME+HSV+RLIG
Sbjct: 590 AGLQDPGRPLGSFLFLGPTGVGKTELTKALAGFLFDDDDAMVRIDMSEFMEKHSVARLIG 649
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG++EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGR VD
Sbjct: 650 APPGYVGYDEGGVLTEAVRRRPYQVVLFDEVEKAHTDVFNVLLQVLDDGRLTDGQGRVVD 709
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F NT+II+TSNLG+++L + G+ V QV+ VR HFRPE LNRLDEI++F LS
Sbjct: 710 FSNTLIILTSNLGSQYLANMEDGQKVSDV-EPQVMDVVRGHFRPEFLNRLDEIILFHRLS 768
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
E + + +Q+ V LA+R + L +TDAA + YDP+YGARP++R +++ V
Sbjct: 769 MEHMAPIVDIQVGRVQKLLADRKIVLDLTDAAKRWLGRVGYDPVYGARPLKRAVQRYVQD 828
Query: 819 ELSRMLVREEIDENSTVYID 838
L+ +L+ ++ + STV ID
Sbjct: 829 PLAELLLEGKVPDGSTVKID 848
>gi|423455303|ref|ZP_17432156.1| chaperone ClpB [Bacillus cereus BAG5X1-1]
gi|401134602|gb|EJQ42215.1| chaperone ClpB [Bacillus cereus BAG5X1-1]
Length = 866
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/874 (51%), Positives = 624/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ +++
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLQDDYISVEHVLI 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGNINQLFTKFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEGIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|310827092|ref|YP_003959449.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308738826|gb|ADO36486.1| hypothetical protein ELI_1500 [Eubacterium limosum KIST612]
Length = 867
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/861 (50%), Positives = 604/861 (70%), Gaps = 27/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ + T K+ EA+ A ++A H + P HL +ALL+ +G+ + G
Sbjct: 1 MDMNMLTQKSIEAVKNAEQIAIDHDHMEIQPEHLLLALLTQENGVVGRLFERLGKNTYPI 60
Query: 61 SAERVFNQAMKKLPSQT-PA--PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ E + +PS T P P ++ S K++ A K D +++V+ L+LG
Sbjct: 61 TQE--LKGDIDNMPSVTGPGREPGKVYISRDTDKIMNEAYKEAKKMEDQYISVEHLLLGF 118
Query: 118 LEDSQIG---DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
S+ +L GV V + +RG G++V S + + T++AL YG DLV+
Sbjct: 119 YSLSRQNAALELLNRHGVTKDEVLKVLRDVRG--GQRVTSDNPEGTYEALTQYGHDLVQD 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
KLDPVIGRD EIR +RILSR+TKNNPVLIGEPGVGKTA+VEGLA RIV+GDVP
Sbjct: 177 CIDNKLDPVIGRDSEIRHTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAARIVQGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D R+I+LDMGALVAGAKYRGEFEERLKAVLKEV++++G+VILFIDE+H ++GAG+TEG
Sbjct: 237 LKDKRIISLDMGALVAGAKYRGEFEERLKAVLKEVKDSDGRVILFIDELHTIVGAGKTEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA N+ KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQ V V EP+V DT++ILR
Sbjct: 297 SMDAGNMLKPMLARGELHCIGATTLDEYRQYIEKDPALERRFQSVLVDEPTVEDTITILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE+YE HGV+IQD ALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS PEE
Sbjct: 357 GLKERYEIFHGVKIQDNALVSAAVLSNRYITDRFLPDKAIDLVDEACAMIRTEIDSMPEE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK +QLEIE AL+KE+DK SK RL ++KEL + RD+ + +++ EK ++
Sbjct: 417 MDEVNRKMIQLEIEETALKKEEDKLSKERLERIQKELAEYRDRFNEMKIQWDNEKNAVES 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
++++K++ + + ++ A+R D +AA+L YG + E++ + ++E + + ++
Sbjct: 477 VQKIKEEIDRVNHQIELAQRESDYDKAAELTYGRLPELQKKMKEMEEAAEARGEGESLIR 536
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSR 578
E+V D+IAEV+S WTGIP++RL E+E+L +G E + V ++++RSR
Sbjct: 537 ESVTEDEIAEVISNWTGIPLSRLMAGEREKLLNLEDTLRKRVVGQEEPIEKVVDAIIRSR 596
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P P GSFLFLGPTGVGKTELAKA+A LFD E+ ++RIDMSEYME+ SVSRLIG
Sbjct: 597 AGIKNPNSPIGSFLFLGPTGVGKTELAKAVAANLFDSEDNMIRIDMSEYMEKFSVSRLIG 656
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRT+D
Sbjct: 657 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHKDVFNVLLQILDDGRVTDSQGRTID 716
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQ-VLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NT+IIMTSN+G+E+LL G+ + + V ++ V+ ++ +FRPE LNR+DEIV++ PL
Sbjct: 717 FKNTIIIMTSNIGSEYLLEGIDAEGNILVETEEAVMNSLKNYFRPEFLNRIDEIVLYKPL 776
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ + ++ L M ++ RL ++ + + +++ A + V+ + YDP YGARP++R+L+K +
Sbjct: 777 TKRSIGRIVDLMMAELQKRLDDKRIVVKLSEDAKEAVIDQGYDPSYGARPLKRFLQKNIE 836
Query: 818 TELSRMLVREEIDENSTVYID 838
T + + ++R +DE+ V +D
Sbjct: 837 TMIGKEIIRGNLDEDQVVTVD 857
>gi|423609680|ref|ZP_17585541.1| chaperone ClpB [Bacillus cereus VD107]
gi|401250695|gb|EJR56987.1| chaperone ClpB [Bacillus cereus VD107]
Length = 866
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/874 (51%), Positives = 619/874 (70%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
E + +KK PS T E + + L +++ RA D +++++ ++L
Sbjct: 61 KTGVESL----IKKKPSVTGGGAEAGKLYITGALQQLLVRAGTEAGKLQDDYISIEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFCEEKGDINQLFIKCNITKDTLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMSAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TD+A + V+ +DP YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDSAKEFVVEAGFDPTYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|339627474|ref|YP_004719117.1| ATP-dependent chaperone ClpB [Sulfobacillus acidophilus TPY]
gi|379008153|ref|YP_005257604.1| ATP-dependent chaperone ClpB [Sulfobacillus acidophilus DSM 10332]
gi|339285263|gb|AEJ39374.1| ATP-dependent chaperone ClpB [Sulfobacillus acidophilus TPY]
gi|361054415|gb|AEW05932.1| ATP-dependent chaperone ClpB [Sulfobacillus acidophilus DSM 10332]
Length = 861
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/860 (53%), Positives = 608/860 (70%), Gaps = 32/860 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DK T K+ EA+A A E A G TP HL ALL+ GI A I G A
Sbjct: 1 MRLDKLTVKSQEALADAQERARQRGQQAVTPEHLLWALLNQTDGIVAPLIEKLGVPLAPL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
A ++KLP + S L +VI A+ + D +++ + L+L L
Sbjct: 61 VAR--VEAEVEKLPRVSGTQAGAYLSPELAEVIEEAERQAEHLKDEYVSTEHLLLALASR 118
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ G + V + ++ +RG +V + + +QAL Y +DL + A G
Sbjct: 119 PKTAAGQILANYSVTPDHLLKALKDVRGSA--RVTDPNPEDKYQALARYSKDLTDLARRG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV DVP L D
Sbjct: 177 KLDPVIGRDEEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVANDVPEGLRDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
R++ALD+G+L+AG+K+RGEFE+RLKAVLKE+E AEG+VILFIDE+H ++GAG+ EG++DA
Sbjct: 237 RVLALDLGSLIAGSKFRGEFEDRLKAVLKEIEAAEGRVILFIDELHTLVGAGKAEGAVDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
ANL KP LARG+LR +GATTL+EYR+Y+EKDAA ERRFQ VYV+EP+V DT++ILRGLK+
Sbjct: 297 ANLLKPALARGELRAVGATTLDEYRQYIEKDAALERRFQPVYVSEPTVEDTIAILRGLKD 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI+D ALV AA+LS RYIT R+LPDKAIDLVDEA +++RV++DS PEE+D L
Sbjct: 357 RYEVHHGVRIRDSALVAAARLSHRYITDRYLPDKAIDLVDEAASHLRVEMDSLPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDK-ASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
ER+R+Q+EIE AL KE+D +KARL + EL +LR++ LM R+++EK ++ +R
Sbjct: 417 ERRRIQMEIEREALGKEEDDPPTKARLARLEAELAELRERRDALMARWEQEKALVNRVRE 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTET 531
LK + +E AER+ DLARAA+LRYG + +E++ A ++E E+ ++ E
Sbjct: 477 LKHQIDEAQIEEARAERQGDLARAAELRYGVLLNLRKELDEAQARVEA--LGESRLMREE 534
Query: 532 VGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAG 580
V IA++V++WTGIPV RL G+ EK ER++G +AV AVA +V R+RAG
Sbjct: 535 VTEQDIAQIVAKWTGIPVARLLEGEREKLLHMEDRLAERVVGQRQAVTAVANAVRRARAG 594
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSFLFLGPTGVGKTELAKALA LFDDEN LVRIDMSEYME+H+VSRLIGAP
Sbjct: 595 LSDPRRPMGSFLFLGPTGVGKTELAKALAAFLFDDENALVRIDMSEYMERHAVSRLIGAP 654
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEA+RRRPYSVVL DE+EKAH VFN LLQVLDDGRLTDGQGRTVDFR
Sbjct: 655 PGYVGYEEGGQLTEAIRRRPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDGQGRTVDFR 714
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEV-RKHFRPELLNRLDEIVVFDPLSH 759
NTVIIMTSNL ++ +L + R+Q+++ + R+ RPE LNR+DE+++F L+
Sbjct: 715 NTVIIMTSNLASQVILEEENAE-----RREQLVEGILRQSLRPEFLNRIDEVIIFSRLTA 769
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
++LR++ RLQ+KDV RL ER + L VTD ALD++ Y P +GARP+RR +++ V
Sbjct: 770 DELRQIVRLQLKDVEARLQERRITLDVTDRALDLLAERGYQPEFGARPLRRLIQRWVQDR 829
Query: 820 LSRMLVREEIDENSTVYIDA 839
L+ ++ EI + V +DA
Sbjct: 830 LAMKVLAGEIHDGDRVKVDA 849
>gi|262204257|ref|YP_003275465.1| ATP-dependent chaperone ClpB [Gordonia bronchialis DSM 43247]
gi|262087604|gb|ACY23572.1| ATP-dependent chaperone ClpB [Gordonia bronchialis DSM 43247]
Length = 876
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/862 (52%), Positives = 601/862 (69%), Gaps = 29/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
M+ T K+ EA+ A +AT GH + HL +AL+ G+ + + AG A
Sbjct: 1 MDTGSLTEKSREALQEAQNVATRMGHTEVDGEHLLLALVDQQEGLVPRLLEQAGANVDAL 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
ER ++ K+ P ++ + L K++ A+ K D++++V+ L++ L
Sbjct: 61 RSDLERELSR-RPKVSGPGATPGQVMITQRLAKLLDAAEREAKRLKDSYVSVEHLVMALS 119
Query: 119 ED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ- 174
E+ S G + GV + + +RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 120 EEGSTSAAGRVLTSHGVTRETFLAALTTVRGNQ--RVTSATPEGAYEALEKYGRDLVSEG 177
Query: 175 -AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
AGKLDPVIGRD EIRRV +ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP L
Sbjct: 178 RAGKLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT--E 291
D + +LDMG+LVAGAKYRGEFEERL+AVL EV+ AEG+++LF+DE+H V+GAG E
Sbjct: 238 RDKTIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGRILLFVDELHTVVGAGSVGGE 297
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
GS+DA N+ KPMLARG+L IGATTL+EYRK++E DAA ERRFQ V V EPS+ D +SIL
Sbjct: 298 GSLDAGNMLKPMLARGELHMIGATTLDEYRKHIESDAALERRFQTVLVDEPSIEDAISIL 357
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RGL+E+ E HGV+IQD ALV A LS RYIT R LPDKAIDLVDEACA +R ++DS P
Sbjct: 358 RGLRERLEVFHGVKIQDGALVAAVTLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPA 417
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
E+D L RK +LEIE AL KE D ASK RL E+R+EL DLR + +++ E++ I
Sbjct: 418 ELDELTRKVTRLEIEEAALSKETDAASKTRLEELRRELADLRAEADARHAQWEAERQAIR 477
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLM 527
++ L+ + E L +EAER YDL RAA+LRYG I + +EAA QL Q N +
Sbjct: 478 RVQELRGELERLRHEAEEAERNYDLNRAAELRYGEITALERRLEAAEEQLATRQG-RNPL 536
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLR 576
L E V D+IAE+V+ WTGIPV RL + E+E R++G EAV VA++V+R
Sbjct: 537 LREVVTEDEIAEIVAAWTGIPVARLQEGEREKLLKLDEILHERVVGQDEAVQLVADAVIR 596
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
+R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E+ +VR+DMSEY E+H+VSRL
Sbjct: 597 ARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLASALFDSEDNMVRLDMSEYQERHTVSRL 656
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
IGAPPGYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQVLDDGR+TD QGR
Sbjct: 657 IGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQ 716
Query: 697 VDFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFD 755
VDFRNTVIIMTSN+G++HLL G+ ++ AR++VL E+R HFRPE LNR+D+IV+F
Sbjct: 717 VDFRNTVIIMTSNIGSQHLLEGVTADGEIEPDARERVLAELRGHFRPEFLNRVDDIVLFT 776
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PL+ Q+ + LQ+ D+ RL+ER + L +T A ++ +DP+YGARP+RR++ +
Sbjct: 777 PLTLPQIEHIVELQLADLRNRLSERQIHLDITPEARRLIAERGFDPVYGARPLRRYIAHE 836
Query: 816 VVTELSRMLVREEIDENSTVYI 837
V T + R L+R EI+ T+ +
Sbjct: 837 VETRIGRALLRGEIEPGGTISV 858
>gi|302786648|ref|XP_002975095.1| hypothetical protein SELMODRAFT_174539 [Selaginella moellendorffii]
gi|300157254|gb|EFJ23880.1| hypothetical protein SELMODRAFT_174539 [Selaginella moellendorffii]
Length = 885
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/862 (50%), Positives = 611/862 (70%), Gaps = 29/862 (3%)
Query: 12 EAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA--QSAERVFNQA 69
+AI + E+A HL ALL +G+ + G +N +S ER F Q
Sbjct: 4 QAIVASPEIAKENKQQIVETEHLMKALLEQKNGLARRVFGKVGVDNTGLLESTER-FIQR 62
Query: 70 MKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGD-LFK 128
K+ +T L ++ RA+ K GD++++++ L+LG L+D + G LFK
Sbjct: 63 QPKIVGETGGS---MLGRELEALLDRARGFMKDMGDSYVSIEHLLLGYLQDKRFGQVLFK 119
Query: 129 EAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDE 186
E + +++ VE +RG + KV S + ++AL YG+DL E A GKLDPVIGRD+
Sbjct: 120 EYQITAKALRTAVESIRGSQ--KVTDQSPEGKYEALDKYGKDLTEMARQGKLDPVIGRDD 177
Query: 187 EIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGAL 246
EIRR ++IL RRTKNNPV IGEPGVGKTA+ EGLAQRIV+GDVP L D +L++LDMGAL
Sbjct: 178 EIRRCIQILCRRTKNNPVFIGEPGVGKTAIAEGLAQRIVQGDVPEALIDRKLVSLDMGAL 237
Query: 247 VAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLAR 306
+AGAKYRGEFE+RLKAVLKEV E++G++ILFIDEIH V+GAG T G+MDA NL KPML R
Sbjct: 238 IAGAKYRGEFEDRLKAVLKEVSESDGRIILFIDEIHTVVGAGATNGAMDAGNLLKPMLGR 297
Query: 307 GQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRI 366
G+LRCIGATTL+EYRKY+EKD A ERRFQQV+V +P+V DT+SILRGL+E+YE HHGVRI
Sbjct: 298 GELRCIGATTLDEYRKYIEKDPALERRFQQVFVDQPTVEDTISILRGLRERYELHHGVRI 357
Query: 367 QDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIE 426
D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+P +D ++R ++LE+E
Sbjct: 358 SDSALVAAALLSDRYISDRFLPDKAIDLVDEAAAKLKMEITSKPTHLDEIDRAVLKLEME 417
Query: 427 LHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREELLFA 486
+L+ + DKAS+ RL ++ EL+ L++K + + +++ EK + +I+ +K++ + +
Sbjct: 418 RLSLKNDTDKASRDRLDKLNVELEALKEKQKEVTQQWEHEKSVMLKIQSIKEEVDRVNLE 477
Query: 487 LQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGPDQIAEVVS 542
+Q+AER YDL RAA+L+YG++ +++E A L+ QS + ML E V D IAE+VS
Sbjct: 478 IQQAERDYDLNRAAELKYGSLMSLQRQLEVAEKNLDDYQSRGSSMLREEVTSDDIAEIVS 537
Query: 543 RWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQPTGSF 591
+WTGIPV++L Q+E E R++G AV AVA+++ RSRAGL P +P SF
Sbjct: 538 KWTGIPVSKLLQSEMEKLLHIDDELHKRVVGQEPAVQAVADAIQRSRAGLSDPNRPIASF 597
Query: 592 LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQ 651
+F+GPTGVGKTELAKALA LF+ E L+RIDMSEYME+H+VSRLIGAPPGYVG+EEGGQ
Sbjct: 598 MFMGPTGVGKTELAKALAAYLFNTEEALIRIDMSEYMEKHTVSRLIGAPPGYVGYEEGGQ 657
Query: 652 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLG 711
L+EAVRRRPYSVVLFDE+EKAH VFN LQ+LDDGR+TD QGR V F+N++IIMTSN+G
Sbjct: 658 LSEAVRRRPYSVVLFDEIEKAHSDVFNIFLQILDDGRVTDSQGRKVSFKNSIIIMTSNIG 717
Query: 712 AEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMK 771
++ +L+ + + + +D+V+ R+ FRPE LNR+DE +VF PL EQ+ K+ +LQ+
Sbjct: 718 SQFILNSLEAGESYERMKDRVMDVARQTFRPEFLNRIDEYIVFKPLDREQINKIVKLQLA 777
Query: 772 DVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDE 831
V RL +R +++ ++++A+D++ YDP +GARP++R ++ +V +++ ++R + E
Sbjct: 778 RVQHRLKDRKISMTISESAVDLLGKMGYDPSFGARPVKRVVQHQVENPIAKGILRGDYKE 837
Query: 832 NSTVYIDA---SPKGDNLVYRV 850
+ T+ +DA +P D L R+
Sbjct: 838 DDTILVDAELVAPSEDVLQQRL 859
>gi|297243145|ref|ZP_06927083.1| ClpB ATP-binding subunit of Clp protease [Gardnerella vaginalis
AMD]
gi|296889356|gb|EFH28090.1| ClpB ATP-binding subunit of Clp protease [Gardnerella vaginalis
AMD]
Length = 864
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/867 (51%), Positives = 609/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + A +AG+AQ LHLA ALL G+ I AG + AE
Sbjct: 4 KFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIGAE- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-- 121
A+ LPS T + P AS L+ + +A+ A GD +++ + +++G++ +
Sbjct: 63 -IRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMHAMGDEYVSTEHMLIGMVASAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 122 AVADIFKKHNVSADVLRKAVPTVRG--GAKVTSPDAEGNYKALEKYSVDMTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVLKE+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 240 SLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EYR++VEKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 300 LKPMLARGELRLVGATTLNEYREHVEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A++ RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDAAARERLEKLQEELANSREKLTGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E ++ E + PDQ
Sbjct: 480 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESQAANAKSEAKEPMVPDQVDA 539
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 540 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 600 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 660 IGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PLS E+L
Sbjct: 720 LIMTSNLGSQFLVQEGLDDAA---KRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELG 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ VA RL++R ++L V+ +A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 777 GIVDIQVRQVAARLSDRRISLDVSGSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 836
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + V D D++ ++
Sbjct: 837 LLSGDVHDGARVVADCENTSDHVTLKI 863
>gi|311113965|ref|YP_003985186.1| chaperone protein ClpB [Gardnerella vaginalis ATCC 14019]
gi|310945459|gb|ADP38163.1| chaperone protein ClpB [Gardnerella vaginalis ATCC 14019]
Length = 868
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/867 (51%), Positives = 609/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + A +AG+AQ LHLA ALL G+ I G + AE
Sbjct: 8 KFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQTGADAQQIGAE- 66
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-- 121
A+ LPS T + P AS L+ + +A+ + GD +++ + +++G++ +
Sbjct: 67 -IRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMRTMGDEYVSTEHMLIGIVASAPN 125
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 126 AVADIFKKHNVSADALRKAVPTVRG--GAKVTSPDAEGNYKALEKYSVDMTARAREGKLD 183
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + RLI
Sbjct: 184 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLI 243
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVLKE+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 244 SLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 303
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EYR+++EKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 304 LKPMLARGELRLVGATTLNEYREHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 363
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 364 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 423
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A+K RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 424 VTRLEMEEMQLKKAEDAAAKERLEKLQEELANSREKLTGLKARWDAEKAGHNKVGDLRAQ 483
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E ++ E + PDQ
Sbjct: 484 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESQAANAKSEAKEPMVPDQVDA 543
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 544 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIRAIADAVRRSRAGIAD 603
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 604 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGY 663
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDE+EKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 664 IGYEEGGQLTEAVRRRPYSVVLFDEIEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTI 723
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PLS E+L
Sbjct: 724 LIMTSNLGSQFLVQEGLDD---DAKRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELG 780
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ VA RL++R ++L V+D+A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 781 GIVDIQVRQVAARLSDRRISLDVSDSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 840
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + V D D++ ++
Sbjct: 841 LLSGKVHDGARVVADCENTSDHVTLKI 867
>gi|156740924|ref|YP_001431053.1| ATPase [Roseiflexus castenholzii DSM 13941]
gi|156232252|gb|ABU57035.1| ATPase AAA-2 domain protein [Roseiflexus castenholzii DSM 13941]
Length = 871
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/869 (51%), Positives = 618/869 (71%), Gaps = 27/869 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAI---NNAGGEN 57
N ++ T K+ EA+ A +A G++Q P HL +ALL G+ Q + N A G
Sbjct: 3 FNTNRLTQKSEEALLSAQSMAERNGNSQIEPEHLLLALLEQTDGVVPQVLTKLNVAVGAL 62
Query: 58 AAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
Q + K P + ++ S + V+ RA GD +++ + L+L +
Sbjct: 63 VQQ-----LRAEINKFPRVSGGGVQLQYSPRMRTVVVRAADEMPQFGDEYISTEHLLLSI 117
Query: 118 LEDSQIG--DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L+ + G + ++AG+ ++ + ++RG + +V S + + T+ AL+ YGRDL E A
Sbjct: 118 LQHAGGGAERVLRQAGITREKLLQALREVRGSQ--RVTSPTPEGTYAALEQYGRDLTELA 175
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 RRGKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVREDVPEAL 235
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ R+IALDMGAL+AGAKYRGEFEERLKAVLKE++E + VILF+DE+H V+GAG EG+
Sbjct: 236 KNKRIIALDMGALIAGAKYRGEFEERLKAVLKEIQERD-DVILFVDELHTVVGAGAAEGA 294
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA+N+ KPMLARG+L +GATTL+EYRK++EKDAA ERRFQ V V PSV DT+SILRG
Sbjct: 295 MDASNMLKPMLARGELHMVGATTLDEYRKHIEKDAALERRFQPVMVDPPSVEDTISILRG 354
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HHGVRI D A+V AA LS RYI+ R LPDKAIDL+DEA A +R+++ S P+E+
Sbjct: 355 LKERYETHHGVRITDAAIVAAATLSDRYISDRFLPDKAIDLIDEAAARLRMEITSDPQEL 414
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D+L+R+ MQLEIE AL+KEKDKASK RL ++ +EL +L+++ + + + ++E+E++ +
Sbjct: 415 DDLKRRIMQLEIEREALKKEKDKASKERLEKLEQELANLQEQRRAVEAQLQREREQLTRV 474
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETV 532
++LK++ ++ ++ A+R YD +AA+L+YG + +E + ++E ++ ML + V
Sbjct: 475 QQLKEQIDQTRVEIERAQRVYDYNKAAELQYGRLNTLERQLAEIEEQIRASGGGMLRQEV 534
Query: 533 GPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGL 581
IAE+VS+WTG+PV++L G+ EK +R++G EAV+AVA +V R+RAGL
Sbjct: 535 TEQDIAEIVSKWTGVPVSKLLEGEIEKLVHMEERLHQRVVGQDEAVSAVANAVRRARAGL 594
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTELA+ALAE LFDDE +VRIDMSEYME+H+V+RLIGAPP
Sbjct: 595 QDPNRPLGSFLFLGPTGVGKTELARALAEFLFDDEQAMVRIDMSEYMEKHTVARLIGAPP 654
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQ+LDDGRLTDG GR V+F+N
Sbjct: 655 GYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQILDDGRLTDGHGRVVNFKN 714
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
TVIIMTSN+ + + + + R V++E+R RPE LNR+DEI+VF PLS EQ
Sbjct: 715 TVIIMTSNIASPTIQELAQRGASQDIIRASVMEELRTQLRPEFLNRIDEIIVFKPLSREQ 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++ +Q+ + LA+R ++L ++ AA + ++AE YDP++GARP++R +++++ L+
Sbjct: 775 IGQIVEIQLNRLRRLLADRKISLELSPAAREKLVAEGYDPVFGARPLKRVIQQRIQNPLA 834
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRV 850
L++ E + T+ ID +P G R+
Sbjct: 835 LHLLQGEFRDGDTILIDVAPDGSLAFERI 863
>gi|423460840|ref|ZP_17437637.1| chaperone ClpB [Bacillus cereus BAG5X2-1]
gi|401139685|gb|EJQ47244.1| chaperone ClpB [Bacillus cereus BAG5X2-1]
Length = 866
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/874 (51%), Positives = 621/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPA---STTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E+ + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEVGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I L + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLLTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLGADGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAREFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|384048740|ref|YP_005496757.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
megaterium WSH-002]
gi|345446431|gb|AEN91448.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
megaterium WSH-002]
Length = 867
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/874 (50%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K E + A A + HL L+ GI + +++ ++ Q
Sbjct: 1 MDINKMTQKLQEGVMEAQSEAIKRNQQEVDIAHLLYTLIHQQDGIAPRILDHLHIDH--Q 58
Query: 61 SAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S ++ NQ + K P+ T + E + + L ++ +AQ D +++V+ + L L
Sbjct: 59 SFQQQVNQLLAKKPAVTGSGAEAGKVYITNKLQQLFVKAQEEASRLQDDYVSVEHIFLAL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
++ ++ G LF G+ ++ + LRG + ++ S + + T++AL YGRDLV +
Sbjct: 119 AQEPSSNEYGKLFSSHGITKKALQDVLTSLRGNQ--RITSQNPEVTYEALAKYGRDLVAE 176
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AG +DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP
Sbjct: 177 VRAGNIDPVIGRDGEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRRDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + +LDMGALVAGAK+RGEFEERLKAVL+EV+++ G+++LFIDE+H ++GAGRT+G
Sbjct: 237 LKDKTIFSLDMGALVAGAKFRGEFEERLKAVLQEVKKSNGQILLFIDELHTIVGAGRTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQQV V EPSV DT+SILR
Sbjct: 297 AMDAGNILKPMLARGELHCIGATTLDEYRQYIEKDPALERRFQQVLVDEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHGV I DRA+V AA +S RYI+ R LPDKAIDL+DEACA +R ++DS P E
Sbjct: 357 GLKERFEIHHGVNIHDRAIVSAAVMSDRYISDRFLPDKAIDLIDEACATIRTEIDSMPSE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+AS RL +RKE+ DL+++ + ++++KEK+ I
Sbjct: 417 LDEVTRRVMQLEIEEAALSKETDQASITRLEAIRKEVSDLKERADTMKLQWEKEKQSIQT 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
++ +++K E+ L+EAE +YDL +AA+LR+G I +E + QLE ++ EN +L
Sbjct: 477 VQDVREKLEKAKRDLEEAEGKYDLNKAAELRHGRIPALEKELKQLEETAAQKAQENRLLR 536
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSR 578
E V ++IAE+V RWTGIPV++L + E+E+L IG EAV+ V ++V+R+R
Sbjct: 537 EEVTEEEIAEIVGRWTGIPVSKLVEGEREKLLKLESILQQRVIGQDEAVSLVTDAVIRAR 596
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA LFD E +VRIDMSEYME+H+VSRLIG
Sbjct: 597 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAHSLFDSEEQMVRIDMSEYMEKHAVSRLIG 656
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR TD +G+ +D
Sbjct: 657 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNVLLQILDDGRATDSKGKVID 716
Query: 699 FRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
F+NTVIIMTSN+G++ LL G+ G++T + AR+QV+ ++R+HFRPE LNR+D+ ++F P
Sbjct: 717 FKNTVIIMTSNIGSQFLLDGLTSEGEIT-EKAREQVMAQLRQHFRPEFLNRVDDTILFKP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L+ +++ + + + RL++R ++L +T+ A + + A +DP+YGARP++R+++K +
Sbjct: 776 LTVHEVKGIIDKLLLQLEKRLSDRHISLTLTEEAKNYIAASGFDPVYGARPLKRFIQKYI 835
Query: 817 VTELSRMLVREEIDENSTVYIDASPKGDNLVYRV 850
T+++R L+ +I++ S V +D K D V V
Sbjct: 836 ETKIARELIAGQIEDYSQVTVDV--KDDEFVVSV 867
>gi|423601390|ref|ZP_17577390.1| chaperone ClpB [Bacillus cereus VD078]
gi|401230817|gb|EJR37323.1| chaperone ClpB [Bacillus cereus VD078]
Length = 866
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/874 (51%), Positives = 624/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++++ ++L
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLRDDYISIEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFAKFYITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|33862722|ref|NP_894282.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9313]
gi|54035808|sp|Q7V8B1.1|CLPB_PROMM RecName: Full=Chaperone protein ClpB
gi|33634638|emb|CAE20624.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9313]
Length = 865
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/872 (50%), Positives = 615/872 (70%), Gaps = 30/872 (3%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENA 58
M P D+FT K AI +A +LA H Q HL ++LL + + + + AG +
Sbjct: 1 MQPTADQFTEKGWAAIVLAQQLAQQRKHQQLETEHLLLSLLQQ-NALAGRILEKAG--VS 57
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ + +++ P+ APD + + ++ +A+ ++A GD+ ++++ L+L L
Sbjct: 58 IGNLQTAVEAHLQEQPTMQAAPDSVYLGKGVNDLLDQAEKHKQAFGDSFISIEHLLLALA 117
Query: 119 EDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D++ G L +AGV ++K ++ +RG + KV + + T+++L+ YGRDL A
Sbjct: 118 GDNRCGRKLLNQAGVDAGKLKVAIDAVRGNQ--KVTDQNPEGTYESLEKYGRDLSAAARE 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP+ L +
Sbjct: 176 GKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPAALQN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LI LDMGAL+AGAKYRGEFEERLKAVLKEV +EG+++LFIDEIH V+GAG T G+MD
Sbjct: 236 RQLITLDMGALIAGAKYRGEFEERLKAVLKEVTASEGQIVLFIDEIHTVVGAGATGGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KPMLARG+LRCIGATTL+E+R+++EKD A ERRFQQV V +P+V DT+SILRGLK
Sbjct: 296 ASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVQDTISILRGLK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV AA LS+RYI R LPDKAIDL+DE+ A +++++ S+PEEID
Sbjct: 356 ERYEVHHGVRIADNALVAAAVLSSRYIADRFLPDKAIDLMDESAARLKMEITSKPEEIDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +L +E D SK RL ++ +EL +L ++ L ++++EK ID++
Sbjct: 416 IDRKIVQLEMEKLSLGRESDSVSKERLEKLERELAELAEQQSALNAQWQQEKGAIDDLSS 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGA-------IQEVEAAIGQLEGNQSDENLML 528
LK++ E + +++A+R YDL +AA+L YG + E E A+ Q +G D++L L
Sbjct: 476 LKEEIERVQLQVEQAKRSYDLNKAAELEYGTLAGLQKQLSEKETALAQ-DGEAGDKSL-L 533
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGL-----------AEAVNAVAESVLRS 577
E V D IA+V+++WTGIPV +L Q+E E+L+GL +AV AVA+++ RS
Sbjct: 534 REEVTEDDIADVIAKWTGIPVAKLVQSEMEKLLGLEAELHQRVIGQEQAVQAVADAIQRS 593
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGL P +P SFLFLGPTGVGKTEL+KALA QLFD E LVRIDMSEYME+HSVSRLI
Sbjct: 594 RAGLSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSEAALVRIDMSEYMEKHSVSRLI 653
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+E GGQLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTV
Sbjct: 654 GAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHQDVFNVMLQILDDGRVTDGQGRTV 713
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF NTV+I+TSN+G++ +L + +V + HFRPE LNRLDE ++F L
Sbjct: 714 DFTNTVLILTSNIGSQSILDLGGDDSQYREMERRVHDALHAHFRPEFLNRLDETIIFHSL 773
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
E+LR++ LQ+ + RL +R + L ++D A D + YDP+YGARP++R +++++
Sbjct: 774 RREELRQIVALQVNRLRERLCDRKLGLEISDTAADWLANAGYDPVYGARPLKRAIQRELE 833
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
T +++ ++ ++ V++D + L +R
Sbjct: 834 TPIAKSILAGLYGDSQIVHVDVDVDQERLSFR 865
>gi|283782605|ref|YP_003373359.1| ATP-dependent chaperone protein ClpB [Gardnerella vaginalis 409-05]
gi|283441971|gb|ADB14437.1| ATP-dependent chaperone protein ClpB [Gardnerella vaginalis 409-05]
Length = 864
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/867 (51%), Positives = 609/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + A +AG+AQ LHLA ALL G+ I G + AE
Sbjct: 4 KFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQTGADAQQIGAE- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-- 121
A+ LPS T + P AS L+ + +A+ A GD +++ + +++G++ +
Sbjct: 63 -IRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMHAMGDEYVSTEHMLIGIVASAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 122 AVADIFKKHNVSADALRKAVPTVRG--GAKVTSPDAEGNYKALEKYSVDMTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVLKE+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 240 SLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EYR+++EKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 300 LKPMLARGELRLVGATTLNEYREHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A++ RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDAAARERLEKLQEELANSREKLAGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E ++ E + PDQ
Sbjct: 480 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESQAANAKSEAKEPMVPDQVDA 539
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 540 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 600 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 660 IGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PLS E+L
Sbjct: 720 LIMTSNLGSQFLVQEGLDDAA---KRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELG 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ VA RL++R ++L V+D+A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 777 GIVDIQVRQVAARLSDRRISLDVSDSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 836
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + V D D++ ++
Sbjct: 837 LLSGKVHDGARVVADCENTSDHVTLKI 863
>gi|197104240|ref|YP_002129617.1| ATP-dependent Clp protease, ATP-binding subunit [Phenylobacterium
zucineum HLK1]
gi|196477660|gb|ACG77188.1| ATP-dependent Clp protease, ATP-binding subunit [Phenylobacterium
zucineum HLK1]
Length = 858
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/857 (52%), Positives = 604/857 (70%), Gaps = 22/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN D ++ + +AI A LA + H Q P H+ LL + G+ I +AGG A
Sbjct: 1 MNIDIYSDRAKQAIQSAQSLALARRHQQLGPEHVLKVLLEEKDGLSRALIQSAGGRPDA- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-E 119
A++ + + +LP ++ +V A+A KA GD + ++L++ + E
Sbjct: 60 -ADKAVDDLLGRLPKVEGGSGQLYMKPETARVFAEAEAGAKAAGDAFVTTERLLIAIAKE 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ + K+AG + ++ +R +GR +SAS + + ALK Y RDL + A GK
Sbjct: 119 GGEAANALKQAGASPKGLEEAASAVR--KGRTADSASAEEGYDALKRYARDLTQAARDGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D +
Sbjct: 177 LDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKQ 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L ALDMGAL+AGAKYRGEFEERLKAVL EV +AEG +ILFIDE+H ++GAG+++G+MDA+
Sbjct: 237 LHALDMGALIAGAKYRGEFEERLKAVLNEVTQAEGSIILFIDEMHTLVGAGKSDGAMDAS 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRGLKEK
Sbjct: 297 NLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D A+V AA LS RYIT R LPDKAIDLVDEA + VR+ +DS+PEE+D ++
Sbjct: 357 YEVHHGVRISDSAIVAAATLSNRYITDRFLPDKAIDLVDEAASRVRMAVDSKPEELDEID 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL+IE AL KE D ASKARL ++ +EL L + + R++ EKE++ +++
Sbjct: 417 RRVVQLKIEREALAKETDAASKARLEKLEEELAGLEAQSAEMTARWRAEKEKVSSAAQVR 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ + L L A+RR DL RA+++ YG I ++E + + E + + M E V +QI
Sbjct: 477 EGLDRLRAELTAAQRRGDLQRASEIAYGEIPQLEKRLAEAEAAEGGDEAMTPEVVDAEQI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
A VVSRWTG+PV ++ + E+E R++G EA+ AV+++V R+RAGL P +
Sbjct: 537 AAVVSRWTGVPVEKMLEGEREKLLQMEDGLRRRVVGQEEALVAVSDAVRRARAGLKDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALAE LFDDE+ + R+DMSEYME+HSVSR+IGAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELTKALAEFLFDDESAVTRLDMSEYMEKHSVSRMIGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
+EGG LTE+VRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+IIM
Sbjct: 657 DEGGALTESVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG+E L G ++ AR V++ VR+HFRPE LNR+DE+++F L ++ +
Sbjct: 717 TSNLGSEFLAGGD----DVETARPAVMEVVRRHFRPEFLNRIDEVILFKRLGRAEMDDIV 772
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
R+Q++ V LA+R +ALA+ AAL + YDP+YGARP++R ++K++V ++R L+
Sbjct: 773 RIQLQRVEKLLADRRMALALDPAALHWLGDRGYDPVYGARPLKRVIQKELVDPIARKLLA 832
Query: 827 EEIDENSTVYIDASPKG 843
E+++ S + + A G
Sbjct: 833 GELEDGSVIDVTAGDAG 849
>gi|398827700|ref|ZP_10585906.1| ATP-dependent chaperone ClpB [Phyllobacterium sp. YR531]
gi|398219249|gb|EJN05739.1| ATP-dependent chaperone ClpB [Phyllobacterium sp. YR531]
Length = 870
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/870 (51%), Positives = 599/870 (68%), Gaps = 25/870 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+ + QFTP HL L+ D G+ A I AGG A
Sbjct: 1 MNIEKYTERVRGFIQAAQTFALSSNNQQFTPEHLLKVLVDDEEGLAASLIERAGGRIA-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A+ LP T ++ + L KV A+ + GD+ + V++L+ + +
Sbjct: 59 DVRLGLQAALDALPKVTGGNGQLYLAQPLAKVFATAEEVAQKAGDSFVTVERLLTAMAIE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ S+ ++ AGV A + + + +R +GR +SAS + ++ ALK Y RDL A G
Sbjct: 119 KSSKTSEILSRAGVTAAGLNAVINDIR--KGRTADSASAENSYDALKKYARDLTADARSG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMG+L+AGAKYRGEFEERLK VL EV A G +ILFIDE+H ++GAG++EG+MDA
Sbjct: 237 QLMALDMGSLIAGAKYRGEFEERLKGVLSEVTSANGDIILFIDEMHTLVGAGKSEGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYIT R LPDKAIDL+DE A +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRISDSALVAAATLSNRYITDRFLPDKAIDLIDEGAARLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D AS+ RL + KEL DL ++ + ++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDNASRDRLERLEKELVDLEEQSTAITNTWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ ++ AL A+R + +A +L YG I ++E + + E N + M+ E V PD
Sbjct: 477 KRQLDDARNALASAQRNGEFQKAGELAYGTIPQLEKQLAESEKNDGSTS-MVEEIVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA+VVSRWTGIPV R+ + E+++L +G EAV AV+ +V R+RAGL P
Sbjct: 536 IAQVVSRWTGIPVDRMLEGERDKLLRMEDELAKRVVGQGEAVQAVSRAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL K+LA LF DE +VRIDMSEYME+HSV+RLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKSLASFLFSDETAMVRIDMSEYMEKHSVARLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 656 YEEGGALTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLII 715
Query: 706 MTSNLGAEHLLSGMMGK-VTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
MTSNLGAE+L+S +G+ ++ R+ V+ V+ FRPE LNR+DE+++F L +++
Sbjct: 716 MTSNLGAEYLVS--LGEDQDVEDVREDVMNVVKASFRPEFLNRVDEVILFHRLKRKEMGT 773
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q++ + LA+R + L + D A + + + YDP YGARP++R ++K+V L+ +
Sbjct: 774 IVAIQLQRLQSLLADRKIVLKIDDDATNWLADKGYDPAYGARPLKRVIQKQVQDPLAEKI 833
Query: 825 VREEIDENSTVYIDASPKGDNLVYRVQKNG 854
+ EI + STV I + D L ++ K G
Sbjct: 834 LLGEILDGSTVKITSG--SDRLNFKASKAG 861
>gi|423392449|ref|ZP_17369675.1| chaperone ClpB [Bacillus cereus BAG1X1-3]
gi|401634586|gb|EJS52351.1| chaperone ClpB [Bacillus cereus BAG1X1-3]
Length = 866
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/874 (51%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++++ ++L
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLQDDYISIEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRFYITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKVLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|423486362|ref|ZP_17463044.1| chaperone ClpB [Bacillus cereus BtB2-4]
gi|423492086|ref|ZP_17468730.1| chaperone ClpB [Bacillus cereus CER057]
gi|423501122|ref|ZP_17477739.1| chaperone ClpB [Bacillus cereus CER074]
gi|401153746|gb|EJQ61167.1| chaperone ClpB [Bacillus cereus CER074]
gi|401157675|gb|EJQ65072.1| chaperone ClpB [Bacillus cereus CER057]
gi|402439724|gb|EJV71725.1| chaperone ClpB [Bacillus cereus BtB2-4]
Length = 866
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/874 (51%), Positives = 624/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++++ ++L
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLRDDYISIEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFAKFYITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ +++ +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKAESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGVITDNSHVVVDV--ENNELVVHVK 866
>gi|336422130|ref|ZP_08602284.1| chaperone ClpB 2 [Lachnospiraceae bacterium 5_1_57FAA]
gi|336009420|gb|EGN39414.1| chaperone ClpB 2 [Lachnospiraceae bacterium 5_1_57FAA]
Length = 864
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/857 (51%), Positives = 609/857 (71%), Gaps = 25/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ +A+ ++A G+ + HL ALL + + + G + A
Sbjct: 1 MNINKFTQKSLQAVQDCEKVALEYGNQEIEQEHLLYALLVQDDSLILKLMEKMGIDKNAM 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
RV K+ Q + L K + A+ K GD +++V+ L L +++
Sbjct: 61 -VNRVEEAIRKRTKVQGG---QQYVGQDLNKALIHAEDEAKQMGDEYVSVEHLFLSMIKY 116
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ ++ +F+E GV + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 117 PNKEVKTIFREMGVKRDDFLQVLSTVRGNQ--RVTSDNPEDTYDTLNKYGSDLVERARDQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIR +VRILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 175 KLDPVIGRDAEIRNLVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMGALVAGAKYRGEFEERLKAVL+EV+ ++G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 235 TIFSLDMGALVAGAKYRGEFEERLKAVLEEVKNSDGRIILFIDELHTIVGAGKTDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V D +SILRGLKE
Sbjct: 295 GNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVDEPTVEDAISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D +
Sbjct: 355 RYEVFHGVKITDGALVAAATLSDRYISDRFLPDKAIDLVDEACALIKTELDSMPAELDEM 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK MQ+EIE AL+KE D+ SK RL + +EL +LR+ ++ EK I+ +++L
Sbjct: 415 QRKIMQMEIEAAALKKEDDRLSKERLEHLNQELAELRETFAGKKAQWDNEKVGIERVQKL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+++ E++ +++A++ YDL RAA+L+YG + +++ + + E DE+ L E+V +
Sbjct: 475 REEIEQVNKEIEKAQQAYDLNRAAELQYGRLPQLQKQLEEEETKIKDEDRSLVHESVTDE 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+I +VSRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+ P
Sbjct: 535 EIGRIVSRWTGIPVAKLNESERSKTLHLADELHKRVIGQDEGVELVTEAIIRSKAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALAE LFDDE+ +VRIDMSEYME+ SVSRLIGAPPGYV
Sbjct: 595 TKPIGSFLFLGPTGVGKTELAKALAESLFDDESNMVRIDMSEYMEKFSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT++
Sbjct: 655 GYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTIL 714
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G+ +LL G+ G ++ + ++ V++E++ HFRPE LNRLDE+++F PL+ + +
Sbjct: 715 IMTSNIGSGYLLDGIDDHGNIS-EDSQQAVMEELKAHFRPEFLNRLDEMIMFKPLTKDNI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L + DV RLAE+ + +A+T+AA + V+ YDP YGARP++R+L+K V T +R
Sbjct: 774 YDIIDLLVADVNQRLAEKEICIALTEAAKNYVVEGGYDPTYGARPLKRYLQKHVETLAAR 833
Query: 823 MLVREEIDENSTVYIDA 839
++++ ++ T+ IDA
Sbjct: 834 LMLQGDVGAQETIVIDA 850
>gi|347549598|ref|YP_004855926.1| putative endopeptidase Clp ATP-binding chain B [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346982669|emb|CBW86686.1| Putative endopeptidase Clp ATP-binding chain B (ClpB) [Listeria
ivanovii subsp. ivanovii PAM 55]
Length = 866
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/864 (51%), Positives = 620/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ + + H+ LL++ F + + + N +
Sbjct: 1 MDLKKFTQQVQQTIADAQNLAIASENQEIDVAHIFQVLLTESD--FTKRVYDVAEVNIDE 58
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
V A+KK+P S + S +L +++R A+ QK D ++ + LIL ++
Sbjct: 59 LHHSV-EAALKKIPVVSGSGVNYGQAMSQSLFQLMRDAEKEQKQLEDDFVSTEHLILAVM 117
Query: 119 ED--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K+ A ++K + ++RG G+KV S + + ++AL YGRDLV +
Sbjct: 118 DQKTNPITIELKKQNKAKKQIKEAILQIRG--GKKVTSQNAEENYEALLKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDTEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYREYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYI R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYIADRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEILQRELADYKEEANKMKSKWEAEKGEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQ----SDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I VE + LE + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLTKAAELRHGKIPAVEKELLALEAENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVRLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGY+G+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYIGYEEGGQLTEAVRRSPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGMM-GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEDGEISPELEED-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ +++++++AA + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEISISISEAAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V + +S+V ID S K
Sbjct: 835 PLAREIVSGNVLPHSSVEIDLSEK 858
>gi|228990252|ref|ZP_04150220.1| Chaperone protein clpB 1 [Bacillus pseudomycoides DSM 12442]
gi|228769491|gb|EEM18086.1| Chaperone protein clpB 1 [Bacillus pseudomycoides DSM 12442]
Length = 866
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/874 (52%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLQQQDGLAVRIFQKMNVNIEQL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
+ ER+ ++K PS T + E + + L +++ +A+A K D +++V+ ++L
Sbjct: 61 TKEVERL----LQKKPSVTGSGVEAGKVYVTNALGQLLVKAEAEAKKLQDEYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ + LF + + + ++RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFCEEKGDMNHLFTAFHITKDTLLQSLMEVRGNQ--RVTSQNPEVTYEALEKYGRDLVAE 174
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
GK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP
Sbjct: 175 VRQGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVANGMRAQWQKEKEEIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I VE + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAVEKELREAEETGAHNEQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA +VSRWTGIPV +L G+ EK ER+IG EAV+ VA++VLR+R
Sbjct: 535 EEVSEEEIANIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVADAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQIIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ T+ + ARD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSGHLLEGLQEDGTIKEEARDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RL +R + + +T+ A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLIDRHITVELTEVAKEFVVESGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV VQ
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVQ 866
>gi|210617219|ref|ZP_03291463.1| hypothetical protein CLONEX_03685 [Clostridium nexile DSM 1787]
gi|210149420|gb|EEA80429.1| hypothetical protein CLONEX_03685 [Clostridium nexile DSM 1787]
Length = 860
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/870 (50%), Positives = 615/870 (70%), Gaps = 29/870 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + +A+ ++A G+ + HL AL++ + + + E
Sbjct: 1 MNINKFTQNSMQAVQGCEKVAYEYGNQEIEQEHLLYALVTQNDSLILKLL-----EKMEI 55
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
E N+ + L +T ++ L K + A+ GD +++V+ + L L++
Sbjct: 56 QKELFINRVEEALRKRTKVQGGQVYIGQDLNKALIHAEDEATQMGDEYISVEHIFLALIK 115
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ ++ +FKE + R + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 116 QPNREVKAIFKEFNITRERFLQVLSTVRGNQ--RVTSDNPEATYDTLNKYGSDLVERARE 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA VEGLAQRIVRGDVP L D
Sbjct: 174 QKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAAVEGLAQRIVRGDVPEALKD 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
++ ALDMGALVAGAKYRGEFEERLKAVL+EV+ ++G +ILFIDE+H ++GAG+T+G+MD
Sbjct: 234 KKVFALDMGALVAGAKYRGEFEERLKAVLEEVKNSDGNIILFIDELHTIVGAGKTDGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EPSV D +SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVDEPSVEDAISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 ERYEVFHGVKITDSALVAAATLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELDG 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ MQLEIE AL+KE D+ S+ RLV ++KEL +LRD+ ++ EK ++ +++
Sbjct: 414 LQRRIMQLEIEEAALKKENDRLSQDRLVNLQKELGELRDEFAGKKAQWDNEKTSVERLQK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
++++ E++ +Q+A+ Y+L RAA+L+YG + ++ + + E + +L L E+V
Sbjct: 474 IREEIEQVNQEIQKAQHSYNLERAAELQYGKLPQLTKQLEEEEKKVKERDLSLVHESVTD 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA ++SRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+
Sbjct: 534 EEIARIISRWTGIPVAKLNESERSKTLHLDEELHKRVIGQDEGVTKVTEAIIRSKAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAKALAE LFDDE+ +VRIDMSEYME++SVSRLIGAPPGY
Sbjct: 594 PTKPIGSFLFLGPTGVGKTELAKALAESLFDDESNMVRIDMSEYMEKYSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 654 VGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSN+G+ +LL G+ G+++ + + V+ ++R HFRPE LNRLDE ++F PL+ +
Sbjct: 714 LIMTSNIGSAYLLDGIDENGEISKE-SETMVMNDLRAHFRPEFLNRLDETIMFKPLTKQN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L +KDV RL ++ +++ +TDAA + V+ Y+P+YGARP++R+L+K V T +
Sbjct: 773 VYAIIDLLLKDVNKRLEDKELSIELTDAAKNFVVEGGYEPMYGARPLKRYLQKHVETLAA 832
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+++++ +I + ID +GD L +++
Sbjct: 833 KLILQGDIGSEDVILIDV--EGDKLTAKIK 860
>gi|339638943|emb|CCC18145.1| chaperone protein ClpB [Lactobacillus pentosus IG1]
Length = 867
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/870 (52%), Positives = 614/870 (70%), Gaps = 27/870 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE--NA 58
MNP++FT +A+ A ++A + H + HL L+ P + Q + AG +
Sbjct: 1 MNPEQFTESLQQALQEAQQIAQTRRHQEIGVPHL-FKFLTQPGELVRQIFSEAGADLDQL 59
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q +R + + S S++L +++ A A +K+ GD +LA D L L L+
Sbjct: 60 QQELDRELDDIA--VVSGGNVQYGSTMSSSLATLMQTADAKRKSLGDDYLATDTLALALM 117
Query: 119 EDS--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ + Q+ G+ +VK+ V+++RG G++V S + + +QAL+ YG DLV+QA
Sbjct: 118 DQTGDQLTKYLTSQGITAGQVKNAVDRIRG--GQRVTSRNQEDQYQALEKYGVDLVKQAR 175
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
G DPVIGRDEEI V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP NL
Sbjct: 176 QGNQDPVIGRDEEILDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPENLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D L +LDMG+L+AGAKYRGEFEERLKAVLKE+++++G++I+FIDEIH ++GAG+TEGSM
Sbjct: 236 DKTLFSLDMGSLIAGAKYRGEFEERLKAVLKEIKKSDGQIIMFIDEIHNIVGAGKTEGSM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L IGATTL+EYR+Y+EKD A ERRFQ+V VAEPSV DT+SILRGL
Sbjct: 296 DAGNLLKPMLARGELHLIGATTLDEYRQYMEKDKALERRFQKVLVAEPSVDDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGVRI D ALV AA+LS RYIT R+LPDKA+DLVDEA A +RV+++S P E+D
Sbjct: 356 KERFEIHHGVRIHDNALVAAAKLSDRYITDRYLPDKALDLVDEASAEIRVEMNSNPTELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ M+LE+E AL+KE D AS RL +V+KEL ++K + L R+ EK+ + +
Sbjct: 416 QVNRQLMRLEVEEAALKKETDDASVKRLGDVQKELASAKEKQRALSERWDSEKKSLQALS 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
K ++ L+ AE YDL +AA L++G I E+E + +E N E+ ++ E+V P
Sbjct: 476 DKKSALDKAKHELETAESNYDLEKAAKLQHGTIPELEQELKAMEANDHHEDWLVEESVTP 535
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGR 583
DQIA VVSR TGIPV +L E+E+L+ LA+ AV+AV+++VLRSRAGL
Sbjct: 536 DQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDAVLRSRAGLQD 595
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSF+FLGPTGVGKTELAKALAE LFD ++ +VRIDMSEYME+ SVSRL+GA PGY
Sbjct: 596 PNRPLGSFMFLGPTGVGKTELAKALAENLFDADDHMVRIDMSEYMEKESVSRLVGAAPGY 655
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR PYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+
Sbjct: 656 VGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTI 715
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSNLG+E LL+G+ G ++ + QV+Q V+ F+PE LNR+D+I++F PL +
Sbjct: 716 LIMTSNLGSELLLAGVDDQGHLSDET-HSQVMQLVQSRFKPEFLNRIDDIIMFTPLQLDA 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++ + ++ RL +R + L ++D A + + Y+P YGARP+RR++ V T L+
Sbjct: 775 IEEIVVKLIDRLSARLQDREITLKISDEAKKWIAKQGYEPAYGARPLRRFITNHVETPLA 834
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+ ++ + STV I+ D+LV+ Q
Sbjct: 835 KEIIAGRVAPKSTVAINLL--DDHLVFENQ 862
>gi|423524922|ref|ZP_17501395.1| chaperone ClpB [Bacillus cereus HuA4-10]
gi|401169148|gb|EJQ76395.1| chaperone ClpB [Bacillus cereus HuA4-10]
Length = 866
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/861 (52%), Positives = 617/861 (71%), Gaps = 29/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTKFHITKNNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL ++ EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQLELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYID 838
T+L+R L+ I +NS V +D
Sbjct: 835 TKLARELIAGTITDNSHVVVD 855
>gi|415703742|ref|ZP_11459493.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 284V]
gi|388051048|gb|EIK74073.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 284V]
Length = 864
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/867 (51%), Positives = 610/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + A +AG+AQ LHLA ALL G+ I AG + AE
Sbjct: 4 KFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIGAE- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-- 121
A+ LPS T + P AS L+ + +A+ + GD +++ + +++G++ +
Sbjct: 63 -IRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMRTMGDEYVSTEHMLIGIVASAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 122 AVADIFKKHNVSADALRKAVPTVRG--GAKVTSPDAEGNYKALEKYSVDMTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVLKE+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 240 SLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EYR+++EKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 300 LKPMLARGELRLVGATTLNEYREHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A++ RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDAAARERLEKLQEELANSREKLTGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E ++ E + PDQ
Sbjct: 480 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESQAANAKSEAKEPMVPDQVDA 539
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 540 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIRAIADAVRRSRAGIAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 600 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDE+EKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 660 IGYEEGGQLTEAVRRRPYSVVLFDEIEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PLS E+L
Sbjct: 720 LIMTSNLGSQFLVQEGLDN---DAKRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELG 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ VA RL++R ++L V+D+A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 777 GIVDIQVRQVAARLSDRRISLDVSDSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 836
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + V D D++ ++
Sbjct: 837 LLSGKVHDGARVVADCENTSDHVTLKI 863
>gi|58039904|ref|YP_191868.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Gluconobacter
oxydans 621H]
gi|58002318|gb|AAW61212.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Gluconobacter
oxydans 621H]
Length = 866
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/860 (52%), Positives = 605/860 (70%), Gaps = 24/860 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE-NAA 59
M+ FT ++ + A +A + Q TP HL ALL D G + I AGG+
Sbjct: 1 MDIQNFTERSQGFLQAAQTIALRDYNQQLTPEHLLKALLDDEQGAASGLIRAAGGDPKVV 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTT-LIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q+A + A+ KLP A P T L +++ A++A K GD+H+A D+L++ +
Sbjct: 61 QTAN---DAALAKLPKVQGAGAGQPQMTPDLARLLDAAESAAKVAGDSHVAQDRLLVAIA 117
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQA 175
+ G + ++ V ++R +GR V SAS + TF ALK Y RD+ V QA
Sbjct: 118 ASHTPAGKALVDGKAGAPALERAVAEIR--KGRTVTSASAENTFDALKKYARDVTAVAQA 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++L+RR+KNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 176 GKLDPVIGRDEEIRRTIQVLARRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEALRN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LDMGAL+AGAKYRGEFEERLKAVLKE+E AEG++ILFIDE+H ++GAGR++G+MD
Sbjct: 236 KKLLSLDMGALIAGAKYRGEFEERLKAVLKEIETAEGEIILFIDEMHTLVGAGRSDGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG L C+GATTL+EYRKY+EKDAA RRFQ V+V EPSV DT+SILRG+K
Sbjct: 296 ASNLIKPELARGTLHCVGATTLDEYRKYIEKDAALARRFQPVFVGEPSVADTISILRGIK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PE +D
Sbjct: 356 EKYELHHGVRITDNAIVAAATLSNRYITDRFLPDKAIDLIDEAASRLRMQIDSKPEALDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE A+ KE D ASK RLV + EL DL ++ + + EK+R++ I++
Sbjct: 416 LDRRIIQLKIEREAIRKEDDTASKDRLVALEAELADLEEQSDAMGAEWHAEKDRVNAIQK 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI--GQLEGNQSDENLMLTETVG 533
LK++ + ++ A+R+ +L +A++L YG I +EA I Q E + S ++ + +TV
Sbjct: 476 LKEQLDTARSDVEVAQRQGNLGKASELMYGLIPNLEAQIAKAQEEEDASSKSGLFADTVT 535
Query: 534 PDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLG 582
+A VVSRWTG+PV R+ + E +ER++G +A+ AV+ +V R+RAGL
Sbjct: 536 EQGVASVVSRWTGVPVDRMLEGERAKLIRMEDTLRERVVGQEQALVAVSNAVRRARAGLQ 595
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTEL KALA+ LFDDE L+RIDMSE+ME+H+VSRLIGAPPG
Sbjct: 596 DPNRPIGSFLFLGPTGVGKTELTKALAQFLFDDEKALLRIDMSEFMEKHAVSRLIGAPPG 655
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGG LTEAVRRRPY V+LFDEVEKAH +FN LLQVLDDGRLTDGQGR VDFRNT
Sbjct: 656 YVGYDEGGVLTEAVRRRPYQVILFDEVEKAHEDIFNILLQVLDDGRLTDGQGRVVDFRNT 715
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+I++TSNLG+E L + G+ +V R QV+Q VR HFRPE LNRLDEI++F L + +
Sbjct: 716 IIVLTSNLGSEVLANLPDGESVDEV-RPQVMQVVRNHFRPEFLNRLDEIILFSRLQRKDM 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++ ++Q+ + L +R + L + + + + A YDP+YGARP++R +++ + L+
Sbjct: 775 DRIVKIQISRLQKLLEDRKIDLELDEKGTEWLAAAGYDPVYGARPLKRVIQRSLQNPLAS 834
Query: 823 MLVREEIDENSTVYIDASPK 842
+L+ I + TV + A+ K
Sbjct: 835 LLLEGSIHDGETVKVSANDK 854
>gi|423666938|ref|ZP_17641967.1| chaperone ClpB [Bacillus cereus VDM034]
gi|401304867|gb|EJS10414.1| chaperone ClpB [Bacillus cereus VDM034]
Length = 866
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/874 (51%), Positives = 624/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++++ ++L
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLRDDYISIEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFAKFYITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENSLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGAITDNSHVVVDV--ENNELVVHVK 866
>gi|410460971|ref|ZP_11314624.1| ATP-dependent chaperone ClpB [Bacillus azotoformans LMG 9581]
gi|409926176|gb|EKN63372.1| ATP-dependent chaperone ClpB [Bacillus azotoformans LMG 9581]
Length = 869
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/869 (51%), Positives = 617/869 (71%), Gaps = 43/869 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGI---FAQAINNAGGEN 57
M+ +K T KT EA+ + LA GH Q H+ +LL+ GI Q +N G
Sbjct: 1 MDMNKMTEKTQEALVNSQSLAVRKGHQQVDVEHVFSSLLTQEDGITTSILQKLNINPG-- 58
Query: 58 AAQSAERVFNQAMKKLPSQTPAPDEIPA---STTLIKVIRRAQAAQKAHGDTHLAVDQLI 114
+ +++ +A+ KLP + + E A + L ++ RA+ D +++V+ LI
Sbjct: 59 ---TVQKLVEEALNKLPKVSGSGVESGAVYITQRLQSLLVRAEDEASRLKDEYISVEHLI 115
Query: 115 LGLLEDSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL 171
L + ++ Q I +F++ G A + + ++RG + +V S + + T+ ALK YGRDL
Sbjct: 116 LAMTDEKQTTEIAKIFQQIGFDRASLLKVLTEVRGNQ--RVTSPTPEVTYDALKKYGRDL 173
Query: 172 VE--QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDV 229
VE + GK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DV
Sbjct: 174 VEDVKKGKIDPVIGRDAEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDV 233
Query: 230 PSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGR 289
P L D + +LDM +LVAGAKYRGEFEERLKAVL EV+++ G+++LFIDE+H ++GAG+
Sbjct: 234 PEGLKDKTIFSLDMSSLVAGAKYRGEFEERLKAVLNEVKKSNGRILLFIDELHTIVGAGK 293
Query: 290 TEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVS 349
+EG+MDA N+ KPMLARG+L CIGATTL+E+RKY+EKD A ERRFQQV V EP+V DT+S
Sbjct: 294 SEGAMDAGNMLKPMLARGELHCIGATTLDEHRKYIEKDPALERRFQQVLVEEPTVEDTIS 353
Query: 350 ILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQ 409
ILRGLKE++E HHGV I DRALV AA LS RYIT R LPDKAIDL+DEACA +R ++DS
Sbjct: 354 ILRGLKERFEIHHGVNIHDRALVTAAVLSDRYITERFLPDKAIDLIDEACATIRTEIDSM 413
Query: 410 PEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKER 469
P E+D + RK MQLEIE AL KEKD+AS+ RL +RKEL + ++ + ++ +EK+
Sbjct: 414 PSELDEVTRKIMQLEIEEAALSKEKDQASQERLEALRKELANFKETAHVMKAKWDEEKKE 473
Query: 470 IDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT 529
+ I++L+++ E L +L++AE +YDL +AA+LR+G I +E + + ++ LM++
Sbjct: 474 LQMIQQLREQLEALRRSLEDAEAKYDLNKAAELRHGKIPALEKQL-----KEKEQQLMMS 528
Query: 530 ETVG--------PDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAV 570
E G +++AE+V RWTGIPV+RL G+ EK ER+IG EAV V
Sbjct: 529 EKEGRLLREEVTEEEVAEIVGRWTGIPVSRLVEGEREKLLRLDQILHERVIGQDEAVQLV 588
Query: 571 AESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQ 630
A++V+R+RAG+ P +P GSF+FLGPTGVGKTELAKALAE LFD E ++RIDMSEYME+
Sbjct: 589 ADAVIRARAGVKDPNRPIGSFIFLGPTGVGKTELAKALAESLFDSEEHMIRIDMSEYMEK 648
Query: 631 HSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLT 690
H+VSRLIGAPPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+T
Sbjct: 649 HAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRIT 708
Query: 691 DGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQ-VARDQVLQEVRKHFRPELLNRLD 749
D +GR VDF+NTVIIMTSN+G+ HLL G+ +Q R++VL ++R HFRPE LNR+D
Sbjct: 709 DSKGRVVDFKNTVIIMTSNIGSAHLLEGLTDSGQIQEPVREKVLAQLRHHFRPEFLNRVD 768
Query: 750 EIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIR 809
+ ++F PL+ +++ + + ++ RL +R + L++T+ + E +DP+YGARP++
Sbjct: 769 DTILFKPLTVKEISGIVGKLVNELQARLQDRQIKLSLTEETKLFIANEGFDPVYGARPLK 828
Query: 810 RWLEKKVVTELSRMLVREEIDENSTVYID 838
R++++ + T+++R ++ I + S V ID
Sbjct: 829 RFIQRFIETKVAREIIAGNIIDGSNVVID 857
>gi|289435547|ref|YP_003465419.1| chaperone clpB [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289171791|emb|CBH28337.1| chaperone clpB [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 866
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/860 (50%), Positives = 613/860 (71%), Gaps = 28/860 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + H+ LL++ F + + + N +
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHIFQVLLTESD--FTKRVYDVAEVNI-E 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
V +KK+P S + S L +++R A+ QK GD ++ + LIL ++
Sbjct: 58 ELHHVVGDMLKKIPVVSGSGVNYGQAMSQPLFQLMRDAEKEQKQLGDDFVSTEHLILAVM 117
Query: 119 ED--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K+ +K + ++RG G+KV S + + ++AL YGRDLV +
Sbjct: 118 DQKTNPITSELKKQNKHKKHIKEAILQIRG--GKKVTSQNAEENYEALTKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDTEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDSASERRLEILQRELADYKEEANKMKSKWEAEKSEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I V + + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGKIPAVEKELLELEAENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVRLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGY+G+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYIGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGMM-GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEDGEISPELEED-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ ++++++DAA + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEISISISDAAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYID 838
L+R +V + +S+V ID
Sbjct: 835 PLAREIVSGRVFPHSSVEID 854
>gi|103487872|ref|YP_617433.1| ATPase [Sphingopyxis alaskensis RB2256]
gi|98977949|gb|ABF54100.1| ATPase AAA-2 [Sphingopyxis alaskensis RB2256]
Length = 859
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/865 (52%), Positives = 601/865 (69%), Gaps = 34/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + + A +A H + +P H+A ALL D G+ A I N+GG+ A
Sbjct: 1 MNLEKFTDRAKGFLQAAQTIAIRMNHQRISPEHIAKALLEDSQGMAAGLIANSGGDTARA 60
Query: 61 SAERVFNQAMKKLPS-------QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQL 113
A + + KLP+ TP D ++++ +A+ G ++AV +
Sbjct: 61 VAG--IDALLAKLPAVSGSGAQATPGLD-----NDAVRLLDQAEQVAAKAGSEYVAVQNI 113
Query: 114 ILGLL--EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL 171
+L ++ + +G F +AGV+ + + + KL G GR ++AS + + AL+ + RDL
Sbjct: 114 LLAMVLAPSTPVGKAFADAGVSADALNAAIAKLTG--GRTADTASAEDRYDALRKFARDL 171
Query: 172 VEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDV 229
E A GKLDPVIGRDEEIRR V+IL+RRTKNNPVLIGEPGVGKTA+ EGLA RIV GDV
Sbjct: 172 TEVAREGKLDPVIGRDEEIRRTVQILARRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDV 231
Query: 230 PSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGR 289
P +L D RL+ALDMGAL+AGAKYRGEFEERLK VL +V+ AEG++ILFIDE+H ++GAG+
Sbjct: 232 PDSLKDRRLLALDMGALIAGAKYRGEFEERLKGVLDDVKAAEGEIILFIDEMHTLVGAGK 291
Query: 290 TEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVS 349
+EG+MDA+NL KP LARG+L CIGATTL+EYRK+VEKD A +RRFQ V+V EP+V D++S
Sbjct: 292 SEGAMDASNLLKPALARGELHCIGATTLDEYRKHVEKDPALQRRFQPVFVGEPTVEDSIS 351
Query: 350 ILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQ 409
ILRG+KEKYE HHGVRI D A+V AA LS RYI+ R LPDKAIDL+DEA + +R++++S+
Sbjct: 352 ILRGIKEKYELHHGVRITDGAIVAAATLSHRYISDRFLPDKAIDLMDEAASRIRMEVESK 411
Query: 410 PEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKER 469
PEEI+ L+R+ +Q++IE AL KE D ASK RL ++ EL +L + L +++ EKE+
Sbjct: 412 PEEIETLDRRIIQMKIEEAALGKESDAASKDRLASLQAELANLEQQSAELTQKWQAEKEK 471
Query: 470 IDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT 529
I ++K++ + AL++A+R DLA+A +L YG I +E + + E N ML
Sbjct: 472 IHAEAKIKEELDAARSALEQAQRAGDLAKAGELSYGTIPALEKRLAEAEAASG--NAMLR 529
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSR 578
E V D IA VVSRWTGIPV R+ + E+E+L IG EAV AV+ +V R+R
Sbjct: 530 EEVTADDIAAVVSRWTGIPVDRMMEGEREKLLKMEETLTQRVIGQDEAVRAVSTAVRRAR 589
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P GSFLFLGPTGVGKTEL KALA LFDD+N +VRIDMSEYME+HSV+RL+G
Sbjct: 590 AGLQDPNRPLGSFLFLGPTGVGKTELTKALARFLFDDDNAMVRIDMSEYMEKHSVARLVG 649
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVD
Sbjct: 650 APPGYVGYEEGGTLTEAVRRRPYQVVLFDEVEKAHGDVFNILLQVLDDGRLTDGQGRTVD 709
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F NT+II+TSNLG++ ++ + ++ A V++ VR HFRPE LNRLDEIV+F L
Sbjct: 710 FTNTLIILTSNLGSQA-IAALPDGAPVEQAEPAVMEVVRAHFRPEFLNRLDEIVLFHRLG 768
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
E + + +Q+ V L +R V L +TDAA + YDP+YGARP++R ++K +
Sbjct: 769 QEHMGGIVDIQVARVQKLLDDRKVTLDLTDAARAWLGRVGYDPVYGARPLKRAVQKYLQD 828
Query: 819 ELSRMLVREEIDENSTVYIDASPKG 843
L+ ++++ E+ + +T+ +D G
Sbjct: 829 PLADLILKGEVRDGATIRVDEGDGG 853
>gi|229028943|ref|ZP_04185042.1| Chaperone protein clpB 1 [Bacillus cereus AH1271]
gi|228732223|gb|EEL83106.1| Chaperone protein clpB 1 [Bacillus cereus AH1271]
Length = 866
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/874 (51%), Positives = 621/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTAHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I L + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLLTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEHILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEADGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +T+AA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVQLTNAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|384085053|ref|ZP_09996228.1| clpB protein [Acidithiobacillus thiooxidans ATCC 19377]
Length = 865
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/868 (52%), Positives = 601/868 (69%), Gaps = 29/868 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DK T K +A A LA + H Q P+H +A L GI + AG + A
Sbjct: 1 MRTDKLTTKFQQAFQDAQSLALAQDHQQIEPIHFLIAFLDQEGGIARPVLAKAGVQVDAL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ ++A++ +P P E+ S L + A + GD+ ++ + +L LL+D
Sbjct: 61 RNQ--LSRALEGMPKVHGQPGEVQVSRDLNNMFNLADKISQKRGDSFISTEHFLLALLDD 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ G L K AG ++ V L G G K+ A+ + QAL+ Y D E+A GK
Sbjct: 119 KGEAGRLLKAAGATSKDLEQAVHDLHG--GEKINDANAEEQRQALEKYTTDYTERARQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD+EIRR +++L RR+KNNPVLIGEPGVGKTA+VEGLA R+V G+VP +L D R
Sbjct: 177 LDPVIGRDDEIRRTIQVLLRRSKNNPVLIGEPGVGKTAIVEGLALRMVNGEVPESLRDKR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ LD+GAL+AGAK+RGEFEERLKA+L ++E++EGK+ILFIDEIH ++GAG+ EGSMDA
Sbjct: 237 LLGLDLGALIAGAKFRGEFEERLKALLTDLEKSEGKIILFIDEIHTLVGAGKAEGSMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L CIGATTL+EYRKY+EKDAA ERRFQ+V V EPSV D+++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQRVLVDEPSVEDSIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AAQLS RYI R+LPDKAIDL+DEA + +++++DS+P+E+D LE
Sbjct: 357 YEAHHGVRITDPALVAAAQLSHRYIPDRNLPDKAIDLMDEAASRIKMEIDSKPQELDELE 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL IE ALEKEKD+AS RL ++ ++ DL K Q L +K EK I+ +++
Sbjct: 417 RRIIQLNIERVALEKEKDEASLKRLDILQSQIKDLDKKYQDLEEVWKGEKLTIEGTSQIQ 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI----GQLEGNQSDENLMLTETVG 533
++ + L A R DL R A+L+Y I +EA I Q EG + + +L VG
Sbjct: 477 KELDRKRVDLDTARRANDLERMAELQYSVIPALEAQIKAAETQGEGAKQTKLTLLRTEVG 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
++IAEVV+RWTGIPV+++ + EKE+L +G +EAV AVA ++ RSRAGL
Sbjct: 537 EEEIAEVVARWTGIPVSKMLEGEKEKLLKMEERLQARVVGQSEAVAAVANAIRRSRAGLS 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P++P GSFLFLGPTGVGKTEL KALAE LFD E+LLVRIDMSE+ME+HSV+RLIGAPPG
Sbjct: 597 DPRRPNGSFLFLGPTGVGKTELTKALAEFLFDSEDLLVRIDMSEFMEKHSVARLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRR+PYSVVL DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 657 YVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHADVFNVLLQVLDDGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHL--LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
VI+MTSNLG++ + S M+VA V+ V+ HFRPE LNR+DE+V+F PL+
Sbjct: 717 VIVMTSNLGSDRIQEFSRSGNYDAMRVA---VMDVVQDHFRPEFLNRIDEMVIFHPLTAV 773
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
QLR++ LQM + RL ER + L +++ ALD + YDP+YGARP++R +++++ L
Sbjct: 774 QLREITSLQMGALRARLKERDMDLLLSEGALDRLAEVGYDPVYGARPLKRVIQREIENPL 833
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVY 848
++ L+R + I+ +GDN +
Sbjct: 834 AQRLLRGDFSPGEI--IEVMLEGDNFTF 859
>gi|116075417|ref|ZP_01472677.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. RS9916]
gi|116067614|gb|EAU73368.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. RS9916]
Length = 877
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/855 (51%), Positives = 609/855 (71%), Gaps = 27/855 (3%)
Query: 6 FTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAERV 65
FT K AI A +LA S H Q HL +ALL + +G+ + + AG + + V
Sbjct: 8 FTEKAWGAIVAAQQLAQSHRHQQLESEHLFLALL-EQNGLAGRILEKAG--VSPPELQSV 64
Query: 66 FNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGD 125
Q + + P+ P+ + L ++ RA A ++ +GD+ +A++ L+L L +DS+ G
Sbjct: 65 VEQHLHQQPALQNRPESVYLGKGLSDLLDRADALKQGYGDSFIAIEHLVLALADDSRCGK 124
Query: 126 -LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVI 182
L + G +K+ ++ +RG + V + + T+++L+ YGRDL A GKLDPVI
Sbjct: 125 RLLNQVGADATSLKTAIDAVRGSQ--TVTDQNPEGTYESLEKYGRDLTAAARDGKLDPVI 182
Query: 183 GRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALD 242
GRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L + +LIALD
Sbjct: 183 GRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPQALQNRQLIALD 242
Query: 243 MGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKP 302
MGAL+AGAKYRGEFEERLKAVLKEV +EG+++LFIDEIH V+GAG T G+MDA+NL KP
Sbjct: 243 MGALIAGAKYRGEFEERLKAVLKEVTSSEGRIVLFIDEIHTVVGAGATGGAMDASNLLKP 302
Query: 303 MLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHH 362
MLARG+LRCIGATTL+E+R+++EKD A ERRFQQV V +P+V DT+SILRGLKE+YE HH
Sbjct: 303 MLARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVEDTISILRGLKERYEVHH 362
Query: 363 GVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQ 422
GVRI D ALV AA LS RYI R LPDKAIDLVDE+ A +++++ S+PEEID ++RK +Q
Sbjct: 363 GVRIADSALVAAAVLSTRYIADRFLPDKAIDLVDESAARLKMEITSKPEEIDEIDRKILQ 422
Query: 423 LEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREE 482
LE+E +L +E D AS+ RL + +E+ +L ++ L ++++EK ID++ LK++ E
Sbjct: 423 LEMEKLSLGRESDAASQERLERLEREVAELSEQQSTLNAQWQQEKGAIDDLSNLKEEIER 482
Query: 483 LLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE------GNQSDENLMLTETVGPDQ 536
+ +++A+R YDL +AA+L YG + ++ + E + + +L E V D
Sbjct: 483 VQLQVEQAKRNYDLNKAAELEYGTLAGLQKQLSDQEAALAAADDGGQDKSLLREEVTEDD 542
Query: 537 IAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGRPQ 585
IAEV+++WTGIPV +L Q+E ER++G +AV AVA+++ RSRAGL P
Sbjct: 543 IAEVIAKWTGIPVAKLVQSEMEKLLSLESQLHERVVGQQQAVTAVADAIQRSRAGLSDPN 602
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P SFLFLGPTGVGKTEL+KALA QLFD ++ +VRIDMSEYME+HSVSRLIGAPPGYVG
Sbjct: 603 RPIASFLFLGPTGVGKTELSKALAAQLFDSDDAMVRIDMSEYMEKHSVSRLIGAPPGYVG 662
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+E GGQLTEA+RRRPYSVVLFDEVEKAH VFN +LQ+LDDGR+TDGQGRTVDF N V+I
Sbjct: 663 YEAGGQLTEAIRRRPYSVVLFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTNAVLI 722
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQE-VRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
+TSN+G++ +L + G + ++ + E +R HFRPE LNRLD+ ++F L E+LR+
Sbjct: 723 LTSNIGSQSILD-LGGDDSQHSEMERRVNEALRAHFRPEFLNRLDDQIIFHSLRREELRQ 781
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ LQ++ + RL++R ++L +++ A D + YDP+YGARP++R +++++ T +++ +
Sbjct: 782 IVSLQVERLRHRLSDRKLSLTISEGATDWLANAGYDPVYGARPLKRAIQRELETPIAKAI 841
Query: 825 VREEIDENSTVYIDA 839
+ E +TV +DA
Sbjct: 842 LGGHYGEGATVEVDA 856
>gi|443477588|ref|ZP_21067424.1| ATP-dependent chaperone ClpB [Pseudanabaena biceps PCC 7429]
gi|443017260|gb|ELS31741.1| ATP-dependent chaperone ClpB [Pseudanabaena biceps PCC 7429]
Length = 891
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/894 (49%), Positives = 622/894 (69%), Gaps = 53/894 (5%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
+P KFT K EAI + E+A + H Q HL +ALL G+ A A
Sbjct: 5 DPKKFTEKAWEAIVKSQEVARRSQHQQLEVEHLLMALLEQEEGLTANIFTAMSVPMA--R 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
A R + +++ P + +P+++ L + RA+ ++K+ GD +A++ +++GL++D
Sbjct: 63 ARRQVEEFLRRQP-RVASPEQLYLGRNLEVWLDRAEESRKSFGDEFMAIEHMLIGLIDDD 121
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
++G L+++ + +++ ++ +RG + + + + + AL+ YGRDL EQA GKL
Sbjct: 122 RLGKRLYRDLSIDRKKLEETIKAVRGSQ--TITDQNPEAKYAALEKYGRDLTEQAKEGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRRVV++LSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+RGDVP +L D +
Sbjct: 180 DPVIGRDDEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIRGDVPESLKDRTI 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTE-GSMDAA 297
I+LDMG+L+AGAKYRGEFE+RLKAVLKEV ++GK++LFIDE+H V+GAG T+ G+MDA
Sbjct: 240 ISLDMGSLIAGAKYRGEFEDRLKAVLKEVLNSDGKIVLFIDELHTVVGAGATQQGAMDAG 299
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPMLARG+LRCIGATTL+EYR+Y+EKDAA ERRFQQV V +P+V DT+SILRGLKE+
Sbjct: 300 NILKPMLARGELRCIGATTLDEYRQYIEKDAALERRFQQVLVDQPTVEDTISILRGLKER 359
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGV I D ALV AA LS RYIT R LPDKAIDLVDE+ A +++++ S+P E+D ++
Sbjct: 360 YEVHHGVNISDSALVAAATLSNRYITDRFLPDKAIDLVDESAAKLKMEITSKPLELDEID 419
Query: 418 RKRMQLEIELHALEKEKD--------------------KASKARLVEVRKELDDLRDKLQ 457
R+ MQLE+E +L+KE D KA + RL + KE+ +LRD+
Sbjct: 420 RRLMQLEMERLSLQKEGDFTPIERVEAEGKVVYKTRSSKAVQDRLERLEKEMSELRDRQI 479
Query: 458 PLMMRYKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI--G 515
L R+++EK+ ID +R LK++ ++ ++++ER ++L RAA+L+YG + E+E +
Sbjct: 480 NLDDRWQQEKDTIDNLRSLKEQIDQTKLQIEQSEREFNLNRAAELKYGKLTELEKNLDEA 539
Query: 516 QLEGNQS--DENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIG 562
+LE N++ D +++ E V D IAE+V+RWTGIP+ +L +E+ ER+IG
Sbjct: 540 ELELNRARADGSILFREQVTEDDIAEIVARWTGIPLKKLLLSERQKLLMLEKHLHERVIG 599
Query: 563 LAEAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRI 622
EAV +VA ++ R+RAG+ P +P GSFLFLGPTGVGKTELA+ALAE LFD + +VRI
Sbjct: 600 QEEAVTSVASAIRRARAGMNDPNRPLGSFLFLGPTGVGKTELARALAEFLFDSDASMVRI 659
Query: 623 DMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQ 682
DMSEYME+HSVSRLIGAPPGYVG+EEGGQ +EAVRR PYSVVLFDEVEKAH VFN LLQ
Sbjct: 660 DMSEYMEKHSVSRLIGAPPGYVGYEEGGQFSEAVRRHPYSVVLFDEVEKAHPDVFNILLQ 719
Query: 683 VLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLL-------SGMMGKVTMQVARDQVLQE 735
VLDDGR+TD QGR VD +NTVIIMTSN+G++ +L + RD+V+
Sbjct: 720 VLDDGRITDSQGRLVDCKNTVIIMTSNIGSDRILETSKDLAEDIDADSRYDEMRDRVIDV 779
Query: 736 VRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVL 795
+R HFRPE LNR+DE V+F L ++R +A LQ+K + RL++R ++L +++ A D +
Sbjct: 780 LRNHFRPEFLNRIDETVIFHALRRSEIRAIATLQIKRIESRLSDRKISLKLSEEAKDYIA 839
Query: 796 AESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
A YDP YGARP++R +++++ ++ ++ E T+ I + + D LV+R
Sbjct: 840 AVGYDPSYGARPLKRAIQREIENPIATKIIEGTFSEGQTISI--TVEEDKLVFR 891
>gi|227489263|ref|ZP_03919579.1| endopeptidase Clp [Corynebacterium glucuronolyticum ATCC 51867]
gi|227540852|ref|ZP_03970901.1| endopeptidase Clp [Corynebacterium glucuronolyticum ATCC 51866]
gi|227090794|gb|EEI26106.1| endopeptidase Clp [Corynebacterium glucuronolyticum ATCC 51867]
gi|227183384|gb|EEI64356.1| endopeptidase Clp [Corynebacterium glucuronolyticum ATCC 51866]
Length = 851
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/857 (52%), Positives = 603/857 (70%), Gaps = 34/857 (3%)
Query: 7 THKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAERVF 66
T KT EA+ A +LA+ G+ P H+ VA++ G+ A + AG + + E
Sbjct: 7 TTKTGEALQTALQLASGKGNPDIRPAHILVAIVEQQDGVAAPVLKAAGVDPQVIATE--A 64
Query: 67 NQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE-DSQIG 124
+ ++ PS + + P + + + AQ GD +++ + L+ G+ DS
Sbjct: 65 RKLVEGYPSASGSNMTNPNFNRSALNAFNAAQELAGELGDEYVSTEVLLAGIARGDSDAA 124
Query: 125 DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVI 182
+ G +K+ E++RG G KV +A + FQAL+ Y DL E+A GK+DPVI
Sbjct: 125 KMLARHGATYENIKAAFEQVRG--GHKVTNADPENQFQALEKYSTDLTERARQGKIDPVI 182
Query: 183 GRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALD 242
GRD+EIRRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLA+RIV GDVP +L + RLI+LD
Sbjct: 183 GRDQEIRRVMQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKNKRLISLD 242
Query: 243 MGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFK 301
+G++VAGAKYRGEFEERLKAVL+E++ AEG+++ FIDE+H ++GAG T + +MDA N+ K
Sbjct: 243 LGSMVAGAKYRGEFEERLKAVLEEIKNAEGEIVTFIDELHTIVGAGATGDSAMDAGNMIK 302
Query: 302 PMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGH 361
P+LARG+LR +GATTL+EYRKY+EKDAA ERRFQQVYV EPSV D + ILRGLKE+YE H
Sbjct: 303 PLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVYVGEPSVEDGIGILRGLKERYEVH 362
Query: 362 HGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRM 421
HGVRIQD ALV A LS RYIT R+LPDKAIDL+DEA + +R+++DS P+EID ER
Sbjct: 363 HGVRIQDSALVAAVTLSDRYITNRYLPDKAIDLIDEAASRLRMEIDSSPQEIDEAERIVR 422
Query: 422 QLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKRE 481
+LE+E AL+KE D ASK RL ++R+EL D ++KL L R+ EKE I +++ K++ +
Sbjct: 423 RLEVEELALQKETDAASKERLEKLRRELADEKEKLSELRARWANEKEAISHVQKAKEELD 482
Query: 482 ELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG-NQSDENLMLTETVGPDQIAEV 540
L +EAER DLA+ +++RYG I E A+ + E +++ MLTE V PD IAEV
Sbjct: 483 RLRTESEEAEREGDLAKLSEIRYGKIPAAEKALQEAEDVVNKEQDTMLTEEVTPDTIAEV 542
Query: 541 VSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQPTG 589
VS WTGIP ++ Q E E R++G +AV AV+++V R+RAG+ P +PTG
Sbjct: 543 VSAWTGIPAGKMLQGETEKLLYMEDVLAGRVVGQKQAVTAVSDAVRRARAGVADPNRPTG 602
Query: 590 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 649
SFLFLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RL+GAPPGYVG+++G
Sbjct: 603 SFLFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYVGYDQG 662
Query: 650 GQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 709
GQLTEAVRRRPY+VVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDFRNT++I+TSN
Sbjct: 663 GQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVLDDGRLTDGQGRTVDFRNTLLILTSN 722
Query: 710 LGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQ 769
LGA ++Q++ V++ F+PE +NRLD++V+FD L+ EQL + +Q
Sbjct: 723 LGAGG-------------TKEQMMDAVKRTFKPEFVNRLDDVVIFDSLTKEQLTGIVDIQ 769
Query: 770 MKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEI 829
+ +A RLA R + L V+DAA + YDP YGARP+RR +++ + L+R L+ ++
Sbjct: 770 VGQLAERLAARRLTLQVSDAAKSWLADRGYDPAYGARPLRRLIQQAIGDTLARKLLAGDV 829
Query: 830 DENSTVYIDASPKGDNL 846
+ TV++D + G++L
Sbjct: 830 RDGDTVHVDVADGGEHL 846
>gi|363900249|ref|ZP_09326755.1| ATP-dependent chaperone ClpB [Oribacterium sp. ACB1]
gi|395209804|ref|ZP_10398832.1| ATP-dependent chaperone protein ClpB [Oribacterium sp. ACB8]
gi|361957103|gb|EHL10415.1| ATP-dependent chaperone ClpB [Oribacterium sp. ACB1]
gi|394704789|gb|EJF12321.1| ATP-dependent chaperone protein ClpB [Oribacterium sp. ACB8]
Length = 863
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/855 (50%), Positives = 601/855 (70%), Gaps = 24/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN ++FT K+ E+I + ++A G+ +HL ++LL + A+ + G +
Sbjct: 1 MNINRFTQKSVESINNSQKIAMDHGNQALEQVHLLLSLLEVEDSLIAKLLQKMG--ISPD 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
S R + + LP + K++ A+ KA GD +++V+ + L LL+D
Sbjct: 59 SFTRAVEERINALPKVSGGQQYFSQDAN--KIVMNAEDHAKAMGDEYVSVEHIFLALLKD 116
Query: 121 SQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG-- 176
I +LFKE G+ + S + +RG +KV + + + T+ AL YG ++VE+A
Sbjct: 117 GDKTIRELFKEFGITKEKFLSALSSVRG--NQKVMTDNPEGTYDALNKYGYEMVERASQQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K DP+IGRDEEIR ++RILSR+ KNNP LIGEPGVGKTA VEGLAQRI +GDVP +L +
Sbjct: 175 KFDPIIGRDEEIRNIIRILSRKQKNNPCLIGEPGVGKTAAVEGLAQRIAKGDVPESLKNK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
++ ALDMG+L+AGAKYRGEFEERLKAVL +V ++EG++ILFIDEIH ++GAG+TEGSMDA
Sbjct: 235 KIFALDMGSLIAGAKYRGEFEERLKAVLDDVTKSEGEIILFIDEIHNIVGAGKTEGSMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KP+LARG+L CIGATTL+EYRKY+EKDAA ERRFQ V V EP+V DT+SILRG+KE
Sbjct: 295 GNLLKPLLARGELHCIGATTLDEYRKYIEKDAALERRFQPVMVDEPTVEDTISILRGIKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ ++DS PEE+D
Sbjct: 355 RYEVFHGVKITDTALVAAATLSDRYISDRFLPDKAIDLVDEACAMIKTEMDSMPEEMDEQ 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK MQL+IE AL+KE D+ SK RL ++KEL +LRDK +++ EK + +++ L
Sbjct: 415 QRKIMQLQIEELALKKEDDQLSKERLTTLQKELSELRDKFNVQKAQWENEKNAVSKLQTL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEV-EAAIGQLEGNQSDENLMLT-ETVGP 534
++K+ +L + A ++ + +A+ L+Y + +V + Q +EN L + V
Sbjct: 475 REKKNDLQAEINIAMQKGEYEKASKLQYQDLPQVEKELEEAEALAQKEENSTLVHDKVTE 534
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA ++SRWTGIPVT+L ++E+ +RLIG EAV V E++LRS+AG+
Sbjct: 535 EEIARIISRWTGIPVTKLNESERSKVLHLDEEIHKRLIGQEEAVEKVCEAILRSKAGIKD 594
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAK+LA+ LFDDEN +VRIDMSEYME++SVSRLIGA PGY
Sbjct: 595 PTKPIGSFLFLGPTGVGKTELAKSLAQNLFDDENAMVRIDMSEYMEKYSVSRLIGAAPGY 654
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR+PY+VVLFDE+EKAH VFN LLQVLDDGR+TD QGRT+DF+NT+
Sbjct: 655 VGYEEGGQLTEAVRRKPYAVVLFDEIEKAHPDVFNILLQVLDDGRITDSQGRTIDFKNTI 714
Query: 704 IIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
II+TSN+GA+ LL G+ T+ + R +V + HFRPE LNRLDEI++F PL + +
Sbjct: 715 IILTSNIGAQSLLDGIKEDGTIPEEVRKEVTDALHAHFRPEFLNRLDEIILFKPLVQKDM 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++A L +KD+ RL ++ + + + ALD +L +Y+P +GARP++R+++K V T ++
Sbjct: 775 ERIADLVLKDINKRLQDKRLHIEIAKEALDFILENAYEPGFGARPLKRYMQKHVETLAAK 834
Query: 823 MLVREEIDENSTVYI 837
++ +++ E + I
Sbjct: 835 CILEDKVKEGDKIEI 849
>gi|295112200|emb|CBL28950.1| ATP-dependent chaperone ClpB [Synergistetes bacterium SGP1]
Length = 870
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/859 (52%), Positives = 616/859 (71%), Gaps = 29/859 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K+ A+A A +LA + H Q HL +ALL D G+ + + E +
Sbjct: 1 MDFNKLTTKSQSALAAAQDLAAARSHQQVDVEHLLLALLQDAEGLIPRMLRRM--EVDPK 58
Query: 61 SAERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
E++ + + ++P + + P ++ + L +++ A+ KA D +++V+ L L +
Sbjct: 59 VLEKLVSDEVARMPRVSGSGAEPGKVYVTPRLSRLLAAAEERAKALKDEYVSVEHLFLAM 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
L+ ++ +G + G+ R + ++RG + +V+SA + T++AL YGRDLV
Sbjct: 119 LDEGTNTNLGRILNRLGITEDRFLKALTEVRGSQ--RVQSADPEATYEALAKYGRDLVAA 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRDEE+RRV+RILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP
Sbjct: 177 AREGKLDPVIGRDEEVRRVIRILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMG+LVAGAK+RGEFEERLKAVL EV+++EG+++LFIDE+H ++GAG EG
Sbjct: 237 LKDRTVFALDMGSLVAGAKFRGEFEERLKAVLNEVKQSEGRIVLFIDELHTIVGAGAAEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
++DA N+ KPMLARG+L CIGATT++EYRKY+EKDAA RRFQ V V +P V DT+SILR
Sbjct: 297 AVDAGNMLKPMLARGELHCIGATTVDEYRKYIEKDAALARRFQPVTVDQPDVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
G++EK + HHGVRI+D ALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 357 GIREKLQVHHGVRIRDNALVAAAVLSNRYITNRFLPDKAIDLVDEACAMIRTEIDSLPSE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D R+ MQLEIE AL++E+D AS+ RL ++KEL + R + L +Y+ EK+ I
Sbjct: 417 LDAASRRVMQLEIEETALKREQDAASQERLKVLQKELQEARTEADALRAQYEAEKKSIVG 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL---MLT 529
IR+L+ + +E+ ++ AE +YDL R A+LRYG +Q++E + E + +N +L
Sbjct: 477 IRQLRSQIDEVKAEIERAEHQYDLNRVAELRYGKLQKLEEELKAREAEKEGQNAPGSLLR 536
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSR 578
E V D+IA++VSRWTGIPVT+L + E+E R++G EAV VA++VLR+R
Sbjct: 537 EEVTEDEIADIVSRWTGIPVTKLLEGEREKLLKLDEVLHRRVVGQDEAVQLVADAVLRAR 596
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
+G+ P++P GSF+FLGPTGVGKTELAK LAE LFD E ++RIDMSEYME+HSVSRL+G
Sbjct: 597 SGIRDPRRPIGSFIFLGPTGVGKTELAKTLAEALFDSEENIIRIDMSEYMEKHSVSRLVG 656
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG++EGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQVLDDGR+TD GR VD
Sbjct: 657 APPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQVLDDGRITDSHGRLVD 716
Query: 699 FRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
F+NTVIIMTSN+G+ LL G+ GK++ + AR +V+ +R FRPE LNR+D+IV F P
Sbjct: 717 FKNTVIIMTSNIGSSALLEGITADGKIS-ESARRKVMDALRGAFRPEFLNRVDDIVFFKP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L+ +++R++ RL + + RLA+R +AL +D A++ + YD +YGARP++R++ V
Sbjct: 776 LTRDEVRQIVRLLLGHLEERLADRQIALHFSDEAVNFIGEAGYDSVYGARPLKRYITHNV 835
Query: 817 VTELSRMLVREEIDENSTV 835
T+L+R L+ I ++S V
Sbjct: 836 ETKLARALIAGGIRDHSEV 854
>gi|310823094|ref|YP_003955452.1| ATP-dependent chaperone protein clpb [Stigmatella aurantiaca
DW4/3-1]
gi|309396166|gb|ADO73625.1| ATP-dependent chaperone protein ClpB [Stigmatella aurantiaca
DW4/3-1]
Length = 876
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/870 (51%), Positives = 599/870 (68%), Gaps = 33/870 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DK+T K EAI LA A + + P HLA ALL GI + G ++
Sbjct: 1 MRLDKYTVKAQEAIHEGQALARRADNPSYEPEHLAAALLEQKDGIVEPVLRKIGADSKLF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+A +A+ K+P + S L+K +A+ K D ++ + L+L L D
Sbjct: 61 AAR--LGEALGKIPRMQGGESAL-LSQRLLKTFDKAEDEAKGLKDEFISSEHLLLALTHD 117
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+G++ K +GV RV S ++ +RG +V S ++T+QAL+ YGRDL + A GK
Sbjct: 118 KGTVGEVLKSSGVTRDRVLSGLKDVRGSA--RVTSQDAESTYQALEKYGRDLTDSARSGK 175
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA+RIV GDVP +L + R
Sbjct: 176 LDPVIGRDEEIRRCIQVLSRRTKNNPVLIGEPGVGKTAIAEGLARRIVDGDVPESLKNKR 235
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
LI LD+G++VAGAKYRGEFEERLKAVLKEV +A G++ILFIDE+H ++GAG+ EG+MDA
Sbjct: 236 LITLDLGSMVAGAKYRGEFEERLKAVLKEVADAAGEIILFIDEMHTLVGAGKAEGAMDAG 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L CIGATTL+EYRK++EKDAA ERRFQ V V EPSV DT+SILRGLKE+
Sbjct: 296 NMLKPALARGELHCIGATTLDEYRKHIEKDAALERRFQPVMVGEPSVHDTISILRGLKER 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRIQD+ALV AA LS RYI R LPDKAIDLVDEA + +R+++DS P EID++
Sbjct: 356 YEVHHGVRIQDQALVAAANLSHRYIADRFLPDKAIDLVDEASSRLRIEIDSMPTEIDDIR 415
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK QLEIE L+KE D S+ RL ++ KEL +L ++ L + EK I IR LK
Sbjct: 416 RKMTQLEIERQGLKKETDPHSQERLGQIEKELANLSERFTSLKAHWDAEKSAITGIRELK 475
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVE-------AAIGQLEGNQSDENLMLTE 530
+K E+ AER+ DL RAA+L++G + +E A + +L+ +Q L E
Sbjct: 476 EKLEKAKNDQASAERQGDLNRAAELKFGVLPSLEKEVTAQNAKLAELQKSQK----FLKE 531
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRA 579
V + IAEVV++WT IPV++L + E R+IG A+ AV+ +V R+R+
Sbjct: 532 EVDAEDIAEVVAKWTHIPVSKLLEGEVQKLVKMEDRLSNRVIGQHSAIEAVSNAVRRARS 591
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P GSF+FLGPTGVGKTE AKALAE LFDD++ ++RIDMSEYME+HSV+RL+GA
Sbjct: 592 GLQDPNRPIGSFIFLGPTGVGKTETAKALAEFLFDDDSSMIRIDMSEYMEKHSVARLVGA 651
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG++EGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LD+GRLTD QGRTVDF
Sbjct: 652 PPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHHDVFNILLQILDEGRLTDSQGRTVDF 711
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTV+I+TSN+G++ L GM GK T+ + R +V+ +R HFRPE LNR+DEIV+F+PL
Sbjct: 712 KNTVLILTSNIGSQALQEGMAGKETLDERTRGEVMDALRSHFRPEFLNRVDEIVLFEPLK 771
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ ++ LQ+ + LA++ + L +TDAA + + YDP YGARP++R ++K ++
Sbjct: 772 RSEIHRIVDLQLARLQKLLADKRLTLDLTDAARNFLGERGYDPTYGARPLKRVIQKHLMD 831
Query: 819 ELSRMLVREEIDENSTVYIDASPKGDNLVY 848
L+ ++ + + D S GD L +
Sbjct: 832 PLALKVLGGDFLPGDHIQADVS--GDGLSF 859
>gi|326526385|dbj|BAJ97209.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1044
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/860 (50%), Positives = 603/860 (70%), Gaps = 32/860 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT ++I +A E+A + H HL +LL +G+ + + AG +N R
Sbjct: 154 EFTEMAWQSIVLAPEVAKESKHQIVETEHLMKSLLEQRNGLARRIFSKAGVDNT-----R 208
Query: 65 VFNQAMKKLPSQTPAPDEIPAST---TLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ K + Q E P S L +I+RA+ +K +GD+ ++V+ ++LG +D
Sbjct: 209 LLEATEKYIQRQPKVLGEDPGSMLGRDLEALIQRARNYKKEYGDSFVSVEHIVLGFADDK 268
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LFK+ + V +K+ +E +RGK+ + G ++AL YG+DL A GKL
Sbjct: 269 RFGRQLFKDFQITVETLKTAIESIRGKQNVIDQDPEG--KYEALDKYGKDLTAMARQGKL 326
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L + RL
Sbjct: 327 DPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPQALTNRRL 386
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I LDMGAL+AGAKYRGEFE+RLKAVLKEV +++G+VILFIDEIH V+GAG T G+MDA N
Sbjct: 387 ITLDMGALIAGAKYRGEFEDRLKAVLKEVTDSDGQVILFIDEIHTVVGAGATSGAMDAGN 446
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +P+V DTVSILRGL+E+Y
Sbjct: 447 LLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTVSILRGLRERY 506
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDE+ A +++++ S+P +D ++R
Sbjct: 507 ELHHGVRISDSALVAAAVLSDRYISGRFLPDKAIDLVDESAAKLKMEITSKPTVLDEIDR 566
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
++LE+E +L + DKAS+ RL + EL L+++ + L +++ EK + +I+ +K+
Sbjct: 567 SVLKLEMERLSLTNDTDKASRDRLSRIEAELSLLKERQKGLTEQWEHEKSVMTKIQSIKE 626
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTETVGP 534
+ + L +Q+AER YDL RAA+L+YG++ ++ + + E Q+ ML E V
Sbjct: 627 EIDRLNVEIQQAEREYDLNRAAELKYGSLNALQRDLQKTEDELNEYQNSGKSMLREEVTQ 686
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
D IAE+VSRWTGIPV++L Q+++E R++G AV AVAE++ RSRAGL
Sbjct: 687 DDIAEIVSRWTGIPVSKLKQSDREKLLYLEDELHKRVVGQDPAVKAVAEAIQRSRAGLSD 746
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+F+GPTGVGKTELAKALA +F+ E+ +VRIDMSEYME+HSVSRLIGAPPGY
Sbjct: 747 PNRPIASFMFMGPTGVGKTELAKALASFMFNTEDAVVRIDMSEYMEKHSVSRLIGAPPGY 806
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRRRPYSVVLFDE+EKAH VFN LQ+LDDGR+TD QGR V F N++
Sbjct: 807 VGYEEGGQLTEAVRRRPYSVVLFDEIEKAHSDVFNVFLQILDDGRVTDSQGRKVSFTNSI 866
Query: 704 IIMTSNLGAEHLLS----GMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
IIMTSN+G++++L+ G + + +V+ R FRPE +NR+DE +VF PL
Sbjct: 867 IIMTSNVGSQYILNMDEEGGATDSAYESMKKRVMDAARSVFRPEFMNRVDEYIVFKPLER 926
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
+Q+ + +LQ+ V R+A+R + L V+ +A++ + + YDP YGARP++R L++ V E
Sbjct: 927 KQINSIVKLQLARVQKRIADRKIKLDVSPSAIEFLGSLGYDPNYGARPVKRVLQQYVENE 986
Query: 820 LSRMLVREEIDENSTVYIDA 839
L++ ++R E + ++ +D
Sbjct: 987 LAKGILRGEFKDEDSISVDT 1006
>gi|288574959|ref|ZP_06393316.1| ATP-dependent chaperone ClpB [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570700|gb|EFC92257.1| ATP-dependent chaperone ClpB [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 865
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/848 (52%), Positives = 610/848 (71%), Gaps = 29/848 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ K T K+ EA++ A +++ GH + HL ALLS G+ + + +
Sbjct: 1 MDLQKMTLKSQEALSAARDISIREGHQEVDVEHLLSALLSQEDGLVPSLFDRM--DVPIE 58
Query: 61 SAERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
A+ K P + P++I S L +++ AQ K D +++V+ I G
Sbjct: 59 PVRTSLRDALSKKPRISGGGYDPEKIYVSQRLSRMLLSAQERAKELKDEYVSVEH-IFGA 117
Query: 118 LEDSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
+ D + +L + +GV R + LRG + +V+SA+ +TT++ALK YG DLVEQ
Sbjct: 118 MVDGAPDPVAELLRSSGVDRDRFLKALTSLRGNQ--RVQSATPETTYEALKKYGVDLVEQ 175
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRDEEI RV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRI+ GDVP +
Sbjct: 176 AKNGKLDPVIGRDEEILRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRILNGDVPDS 235
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
+ + ALDMG+LVAGAKYRGEFEERLKAVL EV E++G+++LFIDE+H ++GAG+TEG
Sbjct: 236 IKGHGVFALDMGSLVAGAKYRGEFEERLKAVLNEVRESDGRILLFIDELHTIVGAGKTEG 295
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V PSV D +SILR
Sbjct: 296 SMDAGNMLKPMLARGELHCIGATTLDEYRRYIEKDAALERRFQPVIVDPPSVEDAISILR 355
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E+++ HHGVRI D A+V + LS RYIT R LPDKAIDL+DE+CA +R ++DS P E
Sbjct: 356 GLRERFQVHHGVRITDSAVVASVTLSDRYITDRFLPDKAIDLIDESCAMLRTEIDSMPSE 415
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK M+LEIE AL+KE D+AS RL E+++EL DLR++ L RY+ EKERI
Sbjct: 416 LDGVSRKVMRLEIEEAALKKEDDQASAERLKELQRELQDLREEAASLRSRYEAEKERIQS 475
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLMLTE 530
+R ++++ + + ++EAER YDL RAA+L++G + E+ + + E +S +L E
Sbjct: 476 VRSVREEIDRIGREIEEAERNYDLNRAAELKHGRLPELRKELAERERAMEESGGTRLLRE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRA 579
V ++++E+VS+WTGIPV+RL + E+E R+IG EAV+ V +V+R+RA
Sbjct: 536 EVTEEEVSEIVSKWTGIPVSRLVEGEREKLLRLDEILHRRVIGQDEAVDLVVNAVMRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALAE LFD E +VRIDMSEYMEQHSV+RLIG+
Sbjct: 596 GIKDPRRPIGSFIFLGPTGVGKTELAKALAESLFDTEENIVRIDMSEYMEQHSVARLIGS 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+E+GGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQ+LDDGR+TD GRTVDF
Sbjct: 656 PPGYVGYEDGGQLTEAVRRKPYSVVLFDEIEKAHREVFNVLLQILDDGRITDSHGRTVDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NTVIIMTSN+G+ LL G+M G++ + ++ V+ E+R HFRPE LNR+D+IV+F PL
Sbjct: 716 KNTVIIMTSNIGSARLLQGIMPSGEIPQDI-KNSVMGELRGHFRPEFLNRVDDIVLFTPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ EQ+ + L ++D+ RL +R V L VTD A+ + ++ YDP+YGARP++R++ +
Sbjct: 775 NQEQIVLIVDLLLEDLRSRLKDRKVILKVTDEAMRKIGSDGYDPVYGARPLKRFISHVLE 834
Query: 818 TELSRMLV 825
++++R ++
Sbjct: 835 SKIARAII 842
>gi|260589331|ref|ZP_05855244.1| ATP-dependent chaperone protein ClpB [Blautia hansenii DSM 20583]
gi|260540412|gb|EEX20981.1| ATP-dependent chaperone protein ClpB [Blautia hansenii DSM 20583]
Length = 887
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/866 (51%), Positives = 605/866 (69%), Gaps = 29/866 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ +A+ + A G+ + HL LL + + I E
Sbjct: 25 MNISKFTQKSLQAVQDLEKTAYEFGNQEVEQEHLLYNLLKQEDSLILKLI-----EKMEI 79
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
E N+ + L ++T P L K + A+ K GD +++V+ L L LL
Sbjct: 80 QKEHFLNRVEQALNARTKVSGGQPYIGQYLNKALVTAEDEAKTMGDEYVSVEHLFLALLN 139
Query: 120 DSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ + ++ E G+ R + +RG + +V + + + T+ L YG+DLVE+A
Sbjct: 140 NPSPSMKKIWNEYGITRERFLQALSTVRGNQ--RVTTDNPEVTYDTLNKYGQDLVEKARE 197
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA VEGLAQRIV+GDVP L D
Sbjct: 198 QKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAAVEGLAQRIVQGDVPEGLKD 257
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
++ ALDMGALVAGAKYRGEFEERLKAVL+EV ++EG++ILFIDE+HL++GAG+T+G+MD
Sbjct: 258 KKIFALDMGALVAGAKYRGEFEERLKAVLEEVRKSEGQIILFIDELHLIVGAGKTDGAMD 317
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRGLK
Sbjct: 318 AGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVTVDEPTVEDTISILRGLK 377
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 378 ERYEVFHGVKITDSALVAAATLSDRYISDRFLPDKAIDLVDEACALIKTELDSMPTELDE 437
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ RK MQ+EIE AL+KE D+ S+ RLV ++KE+ +LRD ++ EK ++ +++
Sbjct: 438 MRRKIMQMEIEEAALKKENDRLSQDRLVALQKEMAELRDSFNAQKAQWDNEKSTVERLQK 497
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
L+++ E++ +Q+A+R YDL AA L+YG + +++ + E +++L L E+V
Sbjct: 498 LREQIEDMNNRIQKAQRNYDLDEAAKLQYGELPKLQKQLQAEEEKVKNQDLSLVHESVTD 557
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA ++SRWTGIPV +L + E+ +R+IG E V V ++++RS+AG+
Sbjct: 558 EEIARIISRWTGIPVAKLTEGERTKILHLEEELHKRVIGQDEGVTKVTDAIIRSKAGIKD 617
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAK LA LFDDE +VRIDMSEYME++SVSRLIGAPPGY
Sbjct: 618 PTKPIGSFLFLGPTGVGKTELAKTLAATLFDDEQNMVRIDMSEYMEKYSVSRLIGAPPGY 677
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 678 VGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTI 737
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSN+G+ +LL G+ G++ Q AR+ V +++R HFRPE LNRLDE+++F PL+ +
Sbjct: 738 LIMTSNIGSPYLLEGIEENGEIK-QEAREAVERDLRAHFRPEFLNRLDEMIMFKPLTKDN 796
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L + D+ RL ++ +++ +T AA D ++ YDP+YGARP++R+++K V T +
Sbjct: 797 IGGIVELLLADLNKRLKDQELSIELTKAAKDYIIEGGYDPVYGARPLKRYVQKYVETLTA 856
Query: 822 RMLVREEIDENSTVYIDASPKGDNLV 847
++++ I S + ID + D LV
Sbjct: 857 KLILAGNISAGSRIVIDV--ENDELV 880
>gi|423677009|ref|ZP_17651948.1| chaperone ClpB [Bacillus cereus VDM062]
gi|401306624|gb|EJS12090.1| chaperone ClpB [Bacillus cereus VDM062]
Length = 866
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/874 (51%), Positives = 624/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++++ ++L
Sbjct: 61 KQGVESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLRDDYISIEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFAKFYITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGAITDNSHVVVDV--ENNELVVHVK 866
>gi|39995764|ref|NP_951715.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens PCA]
gi|409911208|ref|YP_006889673.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens KN400]
gi|54035778|sp|Q74FF1.1|CLPB_GEOSL RecName: Full=Chaperone protein ClpB
gi|39982528|gb|AAR33988.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens PCA]
gi|298504774|gb|ADI83497.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens KN400]
Length = 865
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/867 (52%), Positives = 604/867 (69%), Gaps = 27/867 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
+ P+K T KT EA+A A +LA G+ P HL V+LL G+ A I GG AA
Sbjct: 2 IRPEKMTIKTQEALAGAQQLAARQGNGSIEPEHLLVSLLEQEGGLIAPIIQKVGGAPAAL 61
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+SA V +K+LP + A + S L +++ AQ D ++ + L+LG
Sbjct: 62 RSAADVL---VKRLPQVSGATAQAYLSPALNRILDAAQREADTMKDEFVSTEHLLLGFFA 118
Query: 120 DSQIGDL--FKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D Q +AGV+ V + + ++RG G +V + + T+QAL Y RDL + A
Sbjct: 119 DRQCAAARALLDAGVSRDNVLAALMEIRG--GERVTDQNPEDTYQALAKYARDLTDLARQ 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L D
Sbjct: 177 GKLDPVIGRDDEIRRVLQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSGDVPETLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
RL+ALDMGAL+AGAKYRGEFEERLKAV++EV ++EGKVILFIDE+H ++GAG EG+MD
Sbjct: 237 KRLVALDMGALIAGAKYRGEFEERLKAVIREVAKSEGKVILFIDELHTLVGAGAAEGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+N+ KP LARG+L CIGATTL EYRKY+EKDAA ERRFQQVY EPSV DT++ILRGLK
Sbjct: 297 ASNMLKPALARGELHCIGATTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIAILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE +HG+RI+D A++ AA LS RYIT R LPDKAIDL+DEA + +R+++DS P EID
Sbjct: 357 EKYENYHGIRIKDSAIIAAATLSDRYITDRFLPDKAIDLIDEAASRLRIEIDSMPTEIDE 416
Query: 416 LERKRMQLEIELHALEKE-KDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ER+ +QLEIE AL +E +D S RL ++ EL++L+ K L +++EK+ I +
Sbjct: 417 VERRIIQLEIEKQALLRESQDPHSLERLKKLADELEELKAKSAELKGHWQREKDIIGRVS 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTET 531
L+Q+ EE ++AER +LAR A++RYG I +E I D E ML E
Sbjct: 477 SLRQRLEEKREEAKKAEREGNLARTAEIRYGEIPAIEKEIADRSAELEDIRKEGKMLPEE 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
V + +AE+VSRWTGIPV+R+ + E + R++G EA+ VA ++ R+R+G
Sbjct: 537 VDGELVAEIVSRWTGIPVSRMMEGEADKLVHMEDRLITRVVGQDEALVLVANAIRRARSG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P GSFLFLGPTGVGKTE AKALAE LF+D+ +VRIDMSEY E+H+V+RLIGAP
Sbjct: 597 LSDPNRPIGSFLFLGPTGVGKTETAKALAEFLFNDDQAIVRIDMSEYQEKHTVARLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRRRPYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFR
Sbjct: 657 PGYVGYEEGGQLTEAVRRRPYSIVLFDEIEKAHPEVFNVLLQVLDDGRLTDGQGRTVDFR 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NTVIIMTSNLG++ + G + V + +++ F+PE LNR+DEIV++ L E
Sbjct: 717 NTVIIMTSNLGSQWI--QQYGSSDYARMKAMVTETLKEGFKPEFLNRIDEIVIYHALPLE 774
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q++K+ +Q++ + RLA+R + L ++D A + + E YDP YGARP++R +++K+ L
Sbjct: 775 QIKKIVDIQVECLKQRLADRRIVLELSDKAREYLSREGYDPAYGARPLKRTIQRKIQDPL 834
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLV 847
+ L+ + E TV +D S G+ LV
Sbjct: 835 ALALLEGKFQEGDTVRVDLSVSGEELV 861
>gi|226364997|ref|YP_002782780.1| chaperone ClpB [Rhodococcus opacus B4]
gi|226243487|dbj|BAH53835.1| chaperone ClpB [Rhodococcus opacus B4]
Length = 850
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/865 (52%), Positives = 596/865 (68%), Gaps = 38/865 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + A+SAG+ P HL VALL GI A + G + A
Sbjct: 4 FNP---TTKTQAAMTAALQSASSAGNPDIRPAHLLVALLDQTDGIAAPLLKAVGVDPA-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
R + +LP T A + + AQ D +++ + L++GL
Sbjct: 59 EIHREAQNLVDRLPKTTGATTTPQLGREALAALTTAQHLATELDDEYVSTEHLMVGLASG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+S + + + G ++ +RG +V S + T+QAL+ Y DL A GK
Sbjct: 119 ESDVAGILRRHGATPEALRDAFTTVRGSA--RVTSPDPEGTYQALEKYSTDLTALARNGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKS 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+I+LD+G++VAGAKYRGEFEERLKAVL +++ + G+VI FIDE+H ++GAG T E +MDA
Sbjct: 237 VISLDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTLEEYRKY+EKDAA ERRFQQV V EPSV DTV ILRGLKE
Sbjct: 297 GNMIKPMLARGELRLVGATTLEEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEEID +
Sbjct: 357 RYEVHHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDTV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE AL+KE D ASK RL ++R+EL D R+KL L R++ EK+ ID +R +
Sbjct: 417 ERIVRRLEIEEMALQKESDAASKDRLEKLRQELADEREKLNQLTTRWQNEKQAIDSVRGV 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL---EGNQSDENLMLTETVG 533
K++ E L + AER DL RAA+LRYG I ++E + Q G +D ++ML E VG
Sbjct: 477 KEQLETLRGEEERAERDGDLGRAAELRYGRIPQLEKELEQAARDSGAAADGDVMLKEEVG 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
PD +A+VV+ WTGIP R+ + E +R++G EAV AV+++V R+RAG+
Sbjct: 537 PDDVADVVAAWTGIPAGRMMEGETAKLLRMESELGKRVVGQEEAVVAVSDAVRRARAGVA 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +PTGSFLFLGPTGVGKTELAK+LA+ LFDDE +VRIDMSEY E+HSV+RL+GAPPG
Sbjct: 597 DPNRPTGSFLFLGPTGVGKTELAKSLADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+E GGQLTEAVRRRPY+VVLFDEVEKAH VF+ LL VLD+GRLTDGQGRTVDFRNT
Sbjct: 657 YVGYEAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLAVLDEGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++I+TSNLGA +R+QV+ VR F+PE +NRLD++V+F+PL+ EQL
Sbjct: 717 ILILTSNLGAGG-------------SREQVMDAVRHAFKPEFINRLDDVVIFEPLTEEQL 763
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ ++ RLA R + L V+D+A + YDP+YGARP+RR +++ + +L++
Sbjct: 764 ESIVDIQLDQLSRRLAARRLTLDVSDSARFWLAVRGYDPMYGARPLRRLIQQAIGDQLAK 823
Query: 823 MLVREEIDENSTVYIDASPKGDNLV 847
+L+ ++ + TV + S GD LV
Sbjct: 824 LLLAGDVKDGDTVPVKVSETGDALV 848
>gi|363422028|ref|ZP_09310109.1| chaperone ClpB [Rhodococcus pyridinivorans AK37]
gi|359733589|gb|EHK82581.1| chaperone ClpB [Rhodococcus pyridinivorans AK37]
Length = 851
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/865 (53%), Positives = 594/865 (68%), Gaps = 38/865 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + A++AG+ + P HL VALL GI + G + AA
Sbjct: 4 FNP---TTKTQAALTAALQSASAAGNPEIRPAHLLVALLDQTDGIAGPLLEAVGVDPAA- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
R +++LP + A I + AQ D ++ + +++GL
Sbjct: 60 -VRREAEDLVRRLPQTSGATTTPQLGREAIAAMTAAQKLATELTDEFVSTEHVLVGLAGG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
DS + L G A ++ +RG R+V SA + ++QAL+ Y DL +A GK
Sbjct: 119 DSDVAKLLAGHGATPAALRDAFTTVRGN--RRVTSADPEASYQALEKYSTDLTARAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+I+LD+G++VAGAKYRGEFEERLKAVL E++E+ G++I FIDE+H ++GAG T E +MDA
Sbjct: 237 VISLDLGSMVAGAKYRGEFEERLKAVLDEIKESAGQIITFIDELHTIVGAGATGESAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV V EPSV DTV ILRGLKE
Sbjct: 297 GNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEEID +
Sbjct: 357 RYEVHHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDTV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE AL+KE D+ASK RL ++R EL D R+KL L R++ EK ID +R +
Sbjct: 417 ERVVRRLEIEEMALQKESDEASKERLEKLRAELADEREKLNQLTTRWQNEKTAIDSVREI 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAI---QEVEAAIGQLEGNQSDENLMLTETVG 533
K++ E L + AER DL +AA+LRYG I ++ A G + +LML E VG
Sbjct: 477 KEQLESLRGEEERAERDGDLGKAAELRYGRIPELEKKLEAAAAASGTTAGGDLMLKEEVG 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLG 582
PD +A+VV+ WTGIP R+ + E ++R++G AV AV+++V R RAG+
Sbjct: 537 PDDVADVVAAWTGIPAGRMLEGETSKLLRMEDELRKRVVGQDVAVQAVSDAVRRVRAGVA 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEY E+HSV+RL+GAPPG
Sbjct: 597 DPNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+E GGQLTEAVRRRPY+VVLFDEVEKAH VF+TLLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 657 YVGYEAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDTLLQVLDDGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++I+TSNLGA R+ ++ VR F+PE +NRLD++V+FDPLS EQL
Sbjct: 717 ILILTSNLGAGG-------------DREHIMAAVRAAFKPEFINRLDDVVIFDPLSEEQL 763
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
K+ +Q+ A R++ R + L V+ A + YDP YGARP+RR +++ V +L++
Sbjct: 764 EKIVDIQLDQFADRMSARRLTLDVSSTARFWLAVRGYDPQYGARPLRRLIQQAVGDQLAK 823
Query: 823 MLVREEIDENSTVYIDASPKGDNLV 847
L+ EI + TV++ S GD+LV
Sbjct: 824 KLLAGEIKDGDTVHVGVSEDGDHLV 848
>gi|331091591|ref|ZP_08340427.1| chaperone ClpB [Lachnospiraceae bacterium 2_1_46FAA]
gi|330403618|gb|EGG83174.1| chaperone ClpB [Lachnospiraceae bacterium 2_1_46FAA]
Length = 861
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/856 (50%), Positives = 606/856 (70%), Gaps = 25/856 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K+ +A+ ++A G+ + HL +LL+ + + + E
Sbjct: 1 MNINKFTQKSLQAVQGCEKIAYDYGNQEVEQEHLLYSLLTQEDSLILKLL-----EKMNI 55
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
E N+ + L + +I L KV+ + GD +++V+ + L LL+
Sbjct: 56 QKELFINRVEEALRKRVKVQGGQIYIGQDLNKVLIHSDDEATQMGDEYVSVEHIFLSLLK 115
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ +I +FKE G+ + +RG + +V + + + T+ L YG DLVE+A
Sbjct: 116 YPNREIKTIFKEFGITRELFLQALSTVRGNQ--RVTNDNPEATYDTLNKYGTDLVERARE 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA VEGLAQRIVRGDVP L D
Sbjct: 174 QKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAAVEGLAQRIVRGDVPEGLKD 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ ALDMGALVAGAKYRGEFEERLKAVL+EV+ ++GK+ILFIDE+H ++GAG+T+G+MD
Sbjct: 234 KTIFALDMGALVAGAKYRGEFEERLKAVLEEVKSSDGKIILFIDELHTIVGAGKTDGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V D +SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVGEPTVEDAISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 ERYEVFHGVKITDGALVSAAVLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L R+ MQLEIE AL+KE D+ S+ RLV ++KEL +LRD+ ++ EK ++++++
Sbjct: 414 LRRRIMQLEIEEAALKKENDRLSQDRLVNLQKELGELRDEFAGRKAQWDNEKASVEKVQK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVGP 534
++++ E L +Q+A+R YDL +AA+L+YG + +++ + + E ++ E ++ E+V
Sbjct: 474 IREEMEALNKEIQKAQRSYDLEKAAELQYGKLPQLQKQLAEEEEKVKARELTLVHESVTD 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA+++SRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+
Sbjct: 534 EEIAKIISRWTGIPVAKLNESERNKTLHLEEELHKRVIGQDEGVTKVTEAIIRSKAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAKALAE LFDDEN +VRIDMSEYME++SVSRLIGAPPGY
Sbjct: 594 PSKPIGSFLFLGPTGVGKTELAKALAESLFDDENNMVRIDMSEYMEKYSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 654 VGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQ-VLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IMTSN+G+ +LL G+ +Q ++ V++++R HFRPE LNRLDE ++F PL+ +
Sbjct: 714 LIMTSNIGSAYLLDGIDDDGNIQKESEELVMRDLRNHFRPEFLNRLDETIMFKPLTKSNI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L +KD+ RL E+ +++ +T AA ++ Y+ +YGARP++R+L+K V T ++
Sbjct: 774 CDIIDLLVKDINHRLEEKEISIELTQAAKAMITERGYEAMYGARPLKRYLQKHVETLAAK 833
Query: 823 MLVREEIDENSTVYID 838
+++ +++ + ID
Sbjct: 834 LILADKVKSQDIILID 849
>gi|335046842|ref|ZP_08539865.1| ATP-dependent chaperone protein ClpB [Oribacterium sp. oral taxon
108 str. F0425]
gi|363896798|ref|ZP_09323347.1| ATP-dependent chaperone ClpB [Oribacterium sp. ACB7]
gi|333760628|gb|EGL38185.1| ATP-dependent chaperone protein ClpB [Oribacterium sp. oral taxon
108 str. F0425]
gi|361960363|gb|EHL13612.1| ATP-dependent chaperone ClpB [Oribacterium sp. ACB7]
Length = 862
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/855 (50%), Positives = 601/855 (70%), Gaps = 24/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN ++FT K+ E+I + ++A G+ +HL ++LL + A+ + G
Sbjct: 1 MNINRFTQKSVESINNSQKIAMDHGNQALEQVHLLLSLLQVEDSLIAKLLQKMG--IPLD 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
S R + + LP + KV+ A+ KA GD +++V+ + L LL+D
Sbjct: 59 SFTRAVEEKINALPKVSGGQQYFSQDAN--KVVMNAEDHAKAMGDEYVSVEHIFLALLKD 116
Query: 121 SQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG-- 176
I +LFKE G+ + S + +RG +KV + + + T+ AL YG ++VE+A
Sbjct: 117 GDKTIRELFKEFGITKEKFLSALSSVRG--NQKVMTDNPEGTYDALNKYGYEMVERASQQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K DP+IGRDEEIR ++RILSR+ KNNP LIGEPGVGKTA VEGLAQRI +GDVP +L +
Sbjct: 175 KFDPIIGRDEEIRNIIRILSRKQKNNPCLIGEPGVGKTAAVEGLAQRIAKGDVPESLKNK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
++ ALDMG+L+AGAKYRGEFEERLKAVL +V ++EG++ILFIDEIH ++GAG+TEGSMDA
Sbjct: 235 KIFALDMGSLIAGAKYRGEFEERLKAVLDDVTKSEGEIILFIDEIHNIVGAGKTEGSMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KP+LARG+L CIGATTL+EYRKY+EKDAA ERRFQ V V EP+V DT+SILRG+KE
Sbjct: 295 GNLLKPLLARGELHCIGATTLDEYRKYIEKDAALERRFQPVMVDEPTVEDTISILRGIKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ ++DS PEE+D
Sbjct: 355 RYEVFHGVKITDTALVAAATLSDRYISDRFLPDKAIDLVDEACAMIKTEMDSMPEEMDEQ 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK MQL+IE AL+KE D+ SK RLV ++KEL +LRDK +++ EK + +++ L
Sbjct: 415 QRKIMQLQIEELALKKEDDQLSKERLVALQKELSELRDKFNVQKAQWENEKNAVSKLQTL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEV-EAAIGQLEGNQSDENLMLT-ETVGP 534
++K+ +L + A ++ + +A+ L+Y + +V + Q +EN L + V
Sbjct: 475 REKKNDLQAEINIAMQKGEYEKASKLQYQDLPQVEKELEEAEALAQKEENSTLVHDKVTE 534
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA ++SRWTGIPVT+L ++E+ +RLIG EAV V E++LRS+AG+
Sbjct: 535 EEIARIISRWTGIPVTKLNESERSKVLHLDAEIHKRLIGQEEAVEKVCEAILRSKAGIKD 594
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAK+LA+ LFDDEN +VRIDMSEYME++SVSRLIGA PGY
Sbjct: 595 PTKPIGSFLFLGPTGVGKTELAKSLAQNLFDDENAMVRIDMSEYMEKYSVSRLIGAAPGY 654
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR+PY+VVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 655 VGYEEGGQLTEAVRRKPYAVVLFDEIEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTI 714
Query: 704 IIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
II+TSN+GA+ LL G+ T+ + R +V + HFRPE LNRLDEI++F PL + +
Sbjct: 715 IILTSNIGAQSLLDGIKEDGTIPEEVRKEVTDALHAHFRPEFLNRLDEIILFKPLVQKDM 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++A L +KD+ RL ++ + + + AL+ +L +Y+P +GARP++R+++K V T ++
Sbjct: 775 ERIADLVLKDINKRLQDKRLHIEIAKDALEFILENAYEPGFGARPLKRYMQKHVETLAAK 834
Query: 823 MLVREEIDENSTVYI 837
++ +++ E + I
Sbjct: 835 CILEDKVKEGDKIEI 849
>gi|254419857|ref|ZP_05033581.1| ATPase, AAA family [Brevundimonas sp. BAL3]
gi|196186034|gb|EDX81010.1| ATPase, AAA family [Brevundimonas sp. BAL3]
Length = 862
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/858 (51%), Positives = 597/858 (69%), Gaps = 20/858 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN D ++ + +A+ A LA + H QF P HL LL + G+ I AGG+ A+
Sbjct: 1 MNLDLYSDRAKQAVQSAQSLALARRHQQFAPEHLLKVLLEERDGLARNLITAAGGD--AK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
AE A+KK T ++ +V A+ A K GD + ++L+ L +
Sbjct: 59 RAEADTETALKKRAQVTGGSGQLYLDGDTARVFAAAEEASKTAGDAFVTTERLLAALARE 118
Query: 121 SQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ ++ K +G ++ + + ++R +G+ +SA+ + + ALK Y RDL A GK
Sbjct: 119 GGVAAEVLKASGATADKLDAAIAEVR--KGKTADSAAAEDGYDALKRYARDLTLAARDGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DPVIGRDEEIRR +++L+RRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 IDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLRDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMG+L+AGAKYRGEFEERLKAVL EV AEG ++LFIDE+H ++GAG+ +G+MDA+
Sbjct: 237 VMALDMGSLIAGAKYRGEFEERLKAVLSEVSAAEGGIVLFIDEMHTLVGAGKGDGAMDAS 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRGLKEK
Sbjct: 297 NLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA + VR+ +DS+PE +D ++
Sbjct: 357 YEVHHGVRISDSAIVAAATLSNRYITDRFLPDKAIDLIDEAASRVRMAVDSKPEALDEID 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL+IE AL+KE D AS+ RL ++ E+ DL + L ++K EK+++ + +L+
Sbjct: 417 RRLVQLKIEREALKKETDTASQHRLEKLEDEIADLEGQSDDLTTQWKAEKDKVGQGAQLR 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPDQ 536
+ + L L A+R DL RA+++ YG I ++E + + E N++ LT E V +Q
Sbjct: 477 ETLDRLRLELTNAQRAGDLGRASEIAYGQIPQIEKQLAEAEANETSGKGPLTPEVVDAEQ 536
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
IA VVSRWTG+PV ++ + E+E R++G EA+ AV+++V R+RAGL P
Sbjct: 537 IAAVVSRWTGVPVDKMLEGEREKLLKMEEALGGRVVGQDEALAAVSDAVRRARAGLNDPN 596
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSFLFLGPTGVGKTEL KALAE LFDDE + R+DMSEYME+HSVSRLIGAPPGYVG
Sbjct: 597 RPLGSFLFLGPTGVGKTELTKALAEFLFDDEAAITRLDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRT+DFRNT+II
Sbjct: 657 YDEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTIDFRNTLII 716
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLG+++L G ++ R V+ VR HFRPE LNR+DEI++F L EQ+ +
Sbjct: 717 MTSNLGSQYLAEQGEGD-DVEAVRPFVMDAVRAHFRPEFLNRIDEIILFHRLGREQMGGI 775
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
R+Q+ LA+R + L++ DAAL + YDP YGARP++R ++K++V ++R L+
Sbjct: 776 VRIQLSRFEKLLADRRLNLSLDDAALAWLADRGYDPAYGARPLKRVIQKELVDPIARKLL 835
Query: 826 REEIDENSTVYIDASPKG 843
EI++ + + A G
Sbjct: 836 AGEIEDGGVIAVTAGEGG 853
>gi|168046528|ref|XP_001775725.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672877|gb|EDQ59408.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 909
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/865 (50%), Positives = 610/865 (70%), Gaps = 32/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
+N +FT +AI + ++A + HL ALL +G+ + AG +N +
Sbjct: 9 INQGEFTEMAWQAIVASPDVAKESKQQIVETEHLMKALLEQRNGLARRIFAKAGVDNTSL 68
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q+ ER F Q K+ T L +I +A+ +K GD+ ++V+ L+L
Sbjct: 69 LQATER-FIQRQPKVLGDTSGS---MLGRDLEGLIEKARGHKKDFGDSFVSVEHLVLAYT 124
Query: 119 EDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D + G LFKE + + + ++ +RG + KV + ++AL+ YG+DL E A
Sbjct: 125 QDKRFGQQLFKEFQLTAKTLSAAIQSIRGSQ--KVTDQDPEGRYEALEKYGKDLTEMARQ 182
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVPS L +
Sbjct: 183 GKLDPVIGRDDEIRRAIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPSALLN 242
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LI+LDMG+L+AGAKYRGEFE+RLKAVLKEV +++G++ILFIDEIH V+GAG T G+MD
Sbjct: 243 RKLISLDMGSLIAGAKYRGEFEDRLKAVLKEVTDSDGQIILFIDEIHTVVGAGATSGAMD 302
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +PSV DT+SILRGL+
Sbjct: 303 AGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTISILRGLR 362
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV +A L+ RYI R LPDKAIDLVDEA A +++++ S+P +D
Sbjct: 363 ERYELHHGVRISDSALVESAMLADRYIADRFLPDKAIDLVDEAAAKLKMEITSKPTALDE 422
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R ++LE+E +L+ + DKAS+ RL + ELD L+ K + L +++ EK + I+
Sbjct: 423 IDRSVLKLEMERLSLKNDTDKASRDRLDRLVTELDLLKKKQKELTDQWEHEKSVMTRIQS 482
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTET 531
+K++ + + +Q+AER YDL RAA+L+YG++ ++++AA L+ Q+ N ML E
Sbjct: 483 IKEEVDRVNLEIQQAERDYDLNRAAELKYGSLMTLQRQLDAAEKALDEYQNSGNSMLREE 542
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAG 580
V + IAEVVS+WTGIP+++L Q+E+E+L+ L + AV +VAE++ RSRAG
Sbjct: 543 VTGNDIAEVVSKWTGIPISKLQQSEREKLLHLDDELHKRVVGQDPAVKSVAEAIQRSRAG 602
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P SF+F+GPTGVGKTELAKALA LF+ E +VRIDMSEYME+H+VSRL+GAP
Sbjct: 603 LSDPNKPIASFMFMGPTGVGKTELAKALASYLFNTEEAIVRIDMSEYMEKHAVSRLVGAP 662
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QGRTV F
Sbjct: 663 PGYVGYEEGGQLTEAVRRRPYAVILFDEIEKAHSDVFNIFLQILDDGRVTDSQGRTVSFT 722
Query: 701 NTVIIMTSNLGAEHLL------SGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVF 754
NTVIIMTSN+G+ ++L +G +V + R +V++ R FRPE +NR+DE +VF
Sbjct: 723 NTVIIMTSNVGSHYVLNSADSMAGNSKEVIYEAMRARVMEAARNTFRPEFMNRIDEYIVF 782
Query: 755 DPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEK 814
L +Q+ ++ R+Q+ V RL++R + L VT++A+ ++ + YDP YGARP++R +++
Sbjct: 783 QQLDRDQISRIVRIQLDRVQKRLSDRKITLKVTESAIQLLASLGYDPNYGARPVKRVIQQ 842
Query: 815 KVVTELSRMLVREEIDENSTVYIDA 839
V EL+R ++R + E T+ ID+
Sbjct: 843 SVENELARSILRGDFKEEDTILIDS 867
>gi|415721679|ref|ZP_11468612.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703Bmash]
gi|388060384|gb|EIK83076.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703Bmash]
Length = 864
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/867 (51%), Positives = 609/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + A +AG+AQ LHLA ALL G+ I AG + AE
Sbjct: 4 KFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIGAE- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-- 121
A+ LPS T + P AS L+ + +A+ + GD +++ + +++G++ +
Sbjct: 63 -IRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMREMGDEYVSTEHMLIGIVASAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 122 SVADIFKKHNVSADALRKAVPTVRG--GAKVTSPDAEGNYKALEKYSVDMTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVLKE+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 240 SLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EY +++EKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 300 LKPMLARGELRLVGATTLNEYHEHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A++ RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDAAARERLEKLQEELANSREKLSGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E ++ E + PDQ
Sbjct: 480 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESQAANAKSEAKEPMVPDQVDA 539
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 540 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 600 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 660 IGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PLS E+L
Sbjct: 720 LIMTSNLGSQFLVQEGLDDTA---KRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELG 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ VA RL++R ++L V+D+A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 777 GIVDIQVRQVAARLSDRRISLDVSDSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 836
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + V D D++ ++
Sbjct: 837 LLSGKVHDGARVVADCENTSDHVTLKI 863
>gi|308180709|ref|YP_003924837.1| chaperone protein ClpB [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308046200|gb|ADN98743.1| chaperone protein ClpB [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 867
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/880 (51%), Positives = 616/880 (70%), Gaps = 47/880 (5%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP++FT +A+ A ++A + H + HL L+ P + Q + AG +
Sbjct: 1 MNPEQFTESLQQALQQAQQIAQTRRHQEIGVPHL-FKFLTQPGELVRQIFSEAGAD---- 55
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA------------STTLIKVIRRAQAAQKAHGDTHL 108
+Q +L + D+I S++L +++ A A +KA GD +L
Sbjct: 56 -----LDQLQTELDREL---DDIAVVSGGNVQYGGSMSSSLATLMQAADAKRKALGDDYL 107
Query: 109 AVDQLILGLLEDS--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKT 166
A D L L L++ + Q+ + G+ +VK+ V+++RG G++V S + + +QAL+
Sbjct: 108 ATDTLALALMDQTGDQLTKYLNQQGITAGQVKNAVDRIRG--GQRVTSRNQEDQYQALEK 165
Query: 167 YGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRI 224
YG DLV+QA G DPVIGRDEEI V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRI
Sbjct: 166 YGVDLVKQARQGNQDPVIGRDEEILDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRI 225
Query: 225 VRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLV 284
VRGDVP NL D L +LDMG+L+AGAKYRGEFEERLKAVLKE+++++G++I+FIDEIH +
Sbjct: 226 VRGDVPENLKDKTLFSLDMGSLIAGAKYRGEFEERLKAVLKEIKKSDGQIIMFIDEIHNI 285
Query: 285 LGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV 344
+GAG+TEGSMDA NL KPMLARG+L IGATTL+EYR+Y+EKD A ERRFQ+V VAEPSV
Sbjct: 286 VGAGKTEGSMDAGNLLKPMLARGELHLIGATTLDEYRQYMEKDKALERRFQKVLVAEPSV 345
Query: 345 PDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRV 404
DT+SILRGLKE++E HHGVRI D ALV AA+LS RYIT R+LPDKA+DLVDEA A +RV
Sbjct: 346 EDTISILRGLKERFEIHHGVRIHDNALVAAAKLSDRYITDRYLPDKALDLVDEASAEIRV 405
Query: 405 QLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYK 464
+++S P E+D + R+ M+LE+E AL+KE D AS RL +V+KEL ++K + L R+
Sbjct: 406 EMNSNPTELDQVNRQLMRLEVEEAALKKETDDASVKRLADVQKELASAKEKQRALSERWD 465
Query: 465 KEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE 524
EK+ + + K ++ L+ AE YDL +AA L++G I ++E + +E N E
Sbjct: 466 SEKKSLQALSDKKSALDKAKHDLENAENNYDLEQAAKLQHGTIPKLEQELKAMEANDHHE 525
Query: 525 NLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAES 573
+ ++ E+V PDQIA VVSR TGIPV +L E+E+L+ LA+ AV+AV+++
Sbjct: 526 DWLVEESVTPDQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDA 585
Query: 574 VLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV 633
VLRSRAGL P +P GSF+FLGPTGVGKTELAKALAE LFD ++ +VRIDMSEYME+ SV
Sbjct: 586 VLRSRAGLQDPNRPLGSFMFLGPTGVGKTELAKALAENLFDADDHMVRIDMSEYMEKESV 645
Query: 634 SRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQ 693
SRL+GA PGYVG+EEGGQLTEAVRR PYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQ
Sbjct: 646 SRLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTDGQ 705
Query: 694 GRTVDFRNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEI 751
GRTVDF+NT++IMTSNLG+E LL+G+ G ++ + QV+Q V+ F+PE LNR+D+I
Sbjct: 706 GRTVDFKNTILIMTSNLGSELLLAGVDDQGHLSADTHQ-QVMQLVQSRFKPEFLNRIDDI 764
Query: 752 VVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRW 811
++F PL + ++ + ++ RL +R + L ++D A + + Y+P YGARP+RR+
Sbjct: 765 IMFTPLQLGAIEEIVVKLIDRLSARLQDREITLKISDEAKKWIAKQGYEPAYGARPLRRF 824
Query: 812 LEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+ V T L++ ++ + STV I+ D+LV+ Q
Sbjct: 825 ITNHVETPLAKEIIAGRVAPKSTVAINLM--DDHLVFENQ 862
>gi|302774240|ref|XP_002970537.1| hypothetical protein SELMODRAFT_231598 [Selaginella moellendorffii]
gi|300162053|gb|EFJ28667.1| hypothetical protein SELMODRAFT_231598 [Selaginella moellendorffii]
Length = 865
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/845 (51%), Positives = 595/845 (70%), Gaps = 30/845 (3%)
Query: 17 AHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA--QSAERVFNQAMKKLP 74
A ELA S HL ALL +G+ + AG +N+A Q+ ER +++ P
Sbjct: 4 AVELAQSNRQQVVETEHLLKALLEQKNGLARRIFTKAGIDNSALLQATERY----IERQP 59
Query: 75 SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG-DLFKEAGVA 133
T +L ++ RA+ K GD + +++ L+L L ED +IG +LF + G+
Sbjct: 60 KVTGNISGAMLGQSLDSLLDRAKGHMKDFGDNYTSIEHLVLALAEDIRIGKELFGQFGLN 119
Query: 134 VARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEEIRRV 191
K + +RG + KV + + ++AL+ +G DL E A GKLDPVIGRD+EIRR
Sbjct: 120 AKATKDAITAIRGTQ--KVTDQAPENKYEALEKFGVDLTEMARQGKLDPVIGRDDEIRRC 177
Query: 192 VRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAK 251
++IL RRTKNNPV+IGEPGVGKTA+ EGLAQRIV+GDVP LA+ +LI+LD+GAL+AGAK
Sbjct: 178 IQILCRRTKNNPVVIGEPGVGKTAIAEGLAQRIVQGDVPEALANRKLISLDLGALIAGAK 237
Query: 252 YRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRC 311
++GEFE+RLKAVLKEV+E+EG ++LFIDEIH+V+GAG T G+MDA NL +PML RG+LRC
Sbjct: 238 FQGEFEDRLKAVLKEVKESEGYIVLFIDEIHMVVGAGATSGAMDAGNLLRPMLGRGELRC 297
Query: 312 IGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRAL 371
IGATT++EYRKY+EKDAA ERRFQQVYVAEP+V D +SILRGL+EKYE HHGV+I D AL
Sbjct: 298 IGATTIKEYRKYLEKDAALERRFQQVYVAEPAVEDAISILRGLREKYELHHGVKISDNAL 357
Query: 372 VVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIELHALE 431
V AA LS+RYI+ R LPDKAIDLVDEA A ++++ S+P +D ++R ++LE+E ++E
Sbjct: 358 VEAAILSSRYISDRFLPDKAIDLVDEAAAKLKMERTSKPTALDEIDRVIIKLEMERLSVE 417
Query: 432 KEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREELLFALQEAE 491
+ DKAS+ RL ++ EL L++K + L +++ EK + I +K++ + + +Q+AE
Sbjct: 418 HDNDKASRERLQKLEAELASLKEKQKALQQQWEMEKSIMTRINSIKEEIDRVNLEIQQAE 477
Query: 492 RRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTETVGPDQIAEVVSRWTGI 547
R YDL RAA+L+YG + ++ + + EG + E ML E + D IAE+VS+WT I
Sbjct: 478 RDYDLNRAAELKYGVLTNLQKQLNEAEGELATYRKSEKAMLREEITADDIAEIVSKWTKI 537
Query: 548 PVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQPTGSFLFLGP 596
PV+RL Q+E E RLIG AV AVA+++ RSRAGL P +P SF+F+GP
Sbjct: 538 PVSRLLQSEMEKLLHLDEHLHKRLIGQDPAVQAVADAIRRSRAGLADPNRPIASFMFMGP 597
Query: 597 TGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAV 656
TGVGKTELAKALAE LFD + L+R DMSEYME+H+VSRLIGAPPGYVG+EEGGQLTE+V
Sbjct: 598 TGVGKTELAKALAEYLFDTDKALLRFDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTESV 657
Query: 657 RRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLL 716
RRRPYSVVLFDE+EKAH VFN LQ+LDDGR+TD QGRTV+F NTV+IMTSNLG++H+L
Sbjct: 658 RRRPYSVVLFDEIEKAHTDVFNIFLQILDDGRVTDSQGRTVNFTNTVVIMTSNLGSQHIL 717
Query: 717 SGMMG----KVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKD 772
+ Q ++ V++ R FRPE +NR+DE +VF PL +Q++++ +LQ+++
Sbjct: 718 DALKSSGDKNAAYQSMKETVMEVARSTFRPEFMNRVDEFIVFQPLDVDQIQEIVKLQLQN 777
Query: 773 VAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDEN 832
V RL R ++L +TD A+ + YDP YGARP++R +++ V EL++ +++ E E
Sbjct: 778 VEKRLQHRKISLKITDDAVQVFAKLGYDPNYGARPVKRVIQQYVTNELAKGILKGEFKEE 837
Query: 833 STVYI 837
TV I
Sbjct: 838 DTVLI 842
>gi|110801619|ref|YP_698735.1| clpB protein [Clostridium perfringens SM101]
gi|110682120|gb|ABG85490.1| clpB protein [Clostridium perfringens SM101]
Length = 866
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/860 (50%), Positives = 607/860 (70%), Gaps = 25/860 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK T + +++ A+E+A + Q +HL AL++ G+ G
Sbjct: 1 MNADKMTLRVQQSLNDAYEIAVKYNNQQLDIIHLFSALVNQKDGLIPNIFEKMGVN--ID 58
Query: 61 SAERVFNQAMKKLPS---QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S +R + + ++P + + A+ + +V+ +A+ K D++++V+ ++L +
Sbjct: 59 SLKRDIHIQIDRMPKVLGEAAQSSGVTATRRINEVLIKAEEISKQFEDSYISVEHVMLAM 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE- 173
++ + +G++ ++ + + ++RG + +V+S + T++AL+ YG +L+E
Sbjct: 119 IDIDKNGFVGEILRKNRITKDGFLKILNEVRGSQ--RVDSQDPEGTYEALEKYGTNLIEL 176
Query: 174 -QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
+ KLDPVIGRDEEIRR +RILSR+TKNNP+LIGEPGVGKTA+VEGLA+RIVRGDVP
Sbjct: 177 VKQHKLDPVIGRDEEIRRAIRILSRKTKNNPILIGEPGVGKTAIVEGLAERIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D +I+LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EGK+ILFIDEIH ++GAG+T+G
Sbjct: 237 LKDKVIISLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGKIILFIDEIHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V V EP+V +TVSILR
Sbjct: 297 AMDAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVIVEEPTVEETVSILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHG+RI D A+V AA+LS RYI R+LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLKERFEIHHGIRIHDSAIVAAAKLSHRYIQDRYLPDKAIDLIDEAGAMIRSEIDSLPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK + LE E AL KE D ASK RL + KEL +L+DK + ++Y+KEK I
Sbjct: 417 LDIIRRKILMLETEKEALSKENDDASKERLAALEKELAELQDKNDEMTIKYEKEKSHISA 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTE 530
IR LK + +E +++ ER YDL + A+L+YG I E+E I + E + + +EN +L E
Sbjct: 477 IRDLKAELDEARGLVEKYEREYDLNKVAELKYGKIPELERKIKEQEESMEKDNENALLKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRA 579
V ++I+E++S+WTGIPV +L ++ +ER+IG EA AVA +V+R+RA
Sbjct: 537 EVTENEISEIISKWTGIPVAKLVESEREKLLRLEEELRERVIGQDEATTAVANAVIRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL ++P GSF+FLGPTGVGKTELAK LA LFD E+ +VRIDMSEYME+H+VSRLIG
Sbjct: 597 GLKDERKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIVRIDMSEYMEKHAVSRLIGP 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHDDVFNLFLQILDDGRLTDNKGKTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSN+G+ +LL + R+ V+ E++ F+PE LNR+D+I++F PLS
Sbjct: 717 KNTIIIMTSNIGSGYLLENKSSEGIEDDIRENVMNEMKLRFKPEFLNRVDDIIMFRPLSS 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E ++K+ + ++DV RL ER + L VTD A +I++ E YDP+YGARP++R++ + TE
Sbjct: 777 EGIKKIIDIFLRDVENRLRERNITLEVTDKAKEILVEEGYDPVYGARPLKRYISNVLETE 836
Query: 820 LSRMLVREEIDENSTVYIDA 839
+++ ++ EI + S ID
Sbjct: 837 IAKKIIAGEIYDGSVALIDG 856
>gi|145220850|ref|YP_001131528.1| ATPase [Mycobacterium gilvum PYR-GCK]
gi|315442195|ref|YP_004075074.1| ATP-dependent chaperone ClpB [Mycobacterium gilvum Spyr1]
gi|145213336|gb|ABP42740.1| ATPase AAA-2 domain protein [Mycobacterium gilvum PYR-GCK]
gi|315260498|gb|ADT97239.1| ATP-dependent chaperone ClpB [Mycobacterium gilvum Spyr1]
Length = 848
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/863 (53%), Positives = 602/863 (69%), Gaps = 36/863 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + AT+AG+ Q TP HL +ALL+ GI A + G E A
Sbjct: 4 FNP---TTKTQAALTSALQAATAAGNPQITPAHLLMALLTQNDGIAAPLLEAVGVEPATI 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
AE + + +LPS T + + S I I A D +++ + L++GL
Sbjct: 61 RAET--QRLLDRLPSATGSASQPQLSPPAIAAITAATHLATEMDDEYVSTEHLLVGLATG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
DS + + G + ++ K+RG +V + + T+QAL+ Y DL +A GK
Sbjct: 119 DSDVAKVLTGHGASPQALREAFVKVRGSA--RVTNPDPEGTYQALEKYSTDLTARAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D
Sbjct: 177 LDPVIGRDHEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+++LDMG++VAGAKYRGEFEERLKAVL +++ + G++I FIDE+H ++GAG T E +MDA
Sbjct: 237 VVSLDMGSMVAGAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGESAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV V EPSV DTV ILRGLK+
Sbjct: 297 GNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKD 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D +LV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+P EID +
Sbjct: 357 RYEVHHGVRITDSSLVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEIDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE AL KE+D ASK RL ++R EL D +++L L R++ EK ID +R L
Sbjct: 417 ERLVRRLEIEEMALAKEEDAASKDRLEKLRAELADKKEQLAELTTRWQNEKSAIDVVREL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLEGNQSDENLMLTETVGPD 535
K++ E L AER DLA+AA+LRYG I EVE + L ++ EN+ML E VGPD
Sbjct: 477 KEQLESLRGEADRAERDGDLAKAAELRYGRIPEVEKKLDAALPHAEARENVMLKEEVGPD 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
IAEVV WTGIP R+ + E +R++G +AV AV+++V RSRAG+ P
Sbjct: 537 DIAEVVEAWTGIPAGRMLEGETAKLLRMEEELGKRVVGQRKAVTAVSDAVRRSRAGVADP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+PTGSF+FLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RL+GAPPGYV
Sbjct: 597 NRPTGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+++GGQLTEAVRRRPY+V+LFDE+EKAH VF+ LLQVLD+GRLTDGQGRTVDFRNT++
Sbjct: 657 GYDQGGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTIL 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSNLGA + +QV+ VR F+PE +NRLD++++FD L EQL
Sbjct: 717 ILTSNLGAGG-------------SEEQVMAAVRAAFKPEFINRLDDVIMFDALDPEQLVS 763
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q++ +A RLA+R + L V+ A + +DP+YGARP+RR +++ + +L+RML
Sbjct: 764 IVDIQLEQLAKRLAQRRLTLEVSLPAKKWLAERGFDPLYGARPLRRLVQQAIGDQLARML 823
Query: 825 VREEIDENSTVYIDASPKGDNLV 847
+ ++ + V ++ S GD+LV
Sbjct: 824 LSGQVHDGDVVPVNLSADGDSLV 846
>gi|359789216|ref|ZP_09292170.1| ATP-dependent chaperone ClpB [Mesorhizobium alhagi CCNWXJ12-2]
gi|359254957|gb|EHK57915.1| ATP-dependent chaperone ClpB [Mesorhizobium alhagi CCNWXJ12-2]
Length = 869
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/866 (52%), Positives = 602/866 (69%), Gaps = 23/866 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K++ + I A +A S H QFTP H+ L+ D G+ A I AGG + +
Sbjct: 1 MDIEKYSERVRGFIQSAQTMALSRNHQQFTPEHILKVLVDDDEGLAASLIERAGG--SVR 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
+ A++ +P ++ + L KV A+ K GD+ + V++L+ L +
Sbjct: 59 DVKLGVEAALEAMPRVEGTNGQLYLAQPLAKVFSTAEELAKKAGDSFVTVERLLTALAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ ++ ++ +AGV + + +R +GR +SAS + + ALK Y RDL A G
Sbjct: 119 KSAKSAEILSKAGVTAQALNQVINDIR--KGRTADSASAEQGYDALKKYARDLTADARSG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
+LDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 RLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV A G++ILFIDE+H ++GAG+ EG+MDA
Sbjct: 237 KLMALDMGALIAGAKYRGEFEERLKAVLSEVTSASGEIILFIDEMHTLVGAGKAEGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V EP+V DTVSILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVNEPTVEDTVSILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYI R LPDKAIDLVDEA + +R+Q+DS+PE +D +
Sbjct: 357 KYEQHHKVRISDSALVSAATLSNRYIADRFLPDKAIDLVDEAASRLRMQVDSKPEALDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D+ASK RL + KEL L+++ + + EK ++ L
Sbjct: 417 DRRIMQLKIEREALKVETDEASKDRLKRLEKELTGLQEESDSITAAWASEKAKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ +E L A+R + A +L YG I E+E + + E + + M+ ETV PD
Sbjct: 477 KRQLDEARNNLAIAQRNGEFQTAGELAYGRIPELERKLKEAEAHDGVTS-MVEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
+A +VSRWTGIPV ++ Q E++ R+IG EAV AV+++V RSRAGL P
Sbjct: 536 VAHIVSRWTGIPVDKMLQGERDKLLRMEDEIATRVIGQGEAVQAVSKAVRRSRAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDDEN +VRIDMSE+ME+HSV+RL+GAPPGYVG
Sbjct: 596 RPIGSFMFLGPTGVGKTELTKALAAFLFDDENAMVRIDMSEFMEKHSVARLVGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 656 YEEGGTLTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ G+ +V RD+V+ VR FRPE LNR+DEI++F L E + K+
Sbjct: 716 MTSNLGAEYLVALGEGEDVDKV-RDEVMAVVRASFRPEFLNRVDEIILFHRLRREDMGKI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
++Q+K + L++R +++A+ A+D + A YDP YGARP++R ++K++ L+ ++
Sbjct: 775 VQIQLKRLERLLSDRKISIALDQDAIDWLAARGYDPAYGARPLKRVMQKELQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYRVQ 851
EI + STV + A D L +R +
Sbjct: 835 LGEILDGSTVKVTAG--SDRLNFRAK 858
>gi|366162905|ref|ZP_09462660.1| ATP-dependent chaperone ClpB [Acetivibrio cellulolyticus CD2]
Length = 863
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/857 (50%), Positives = 616/857 (71%), Gaps = 24/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DKFT K A++ A ++A GH Q H+ +AL + G+ + + G + Q
Sbjct: 1 MNIDKFTEKAQAAVSAAQDIAVRMGHQQVDGEHIHLALAAQEDGLIPKLLGYMGQD--VQ 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ ++KLP + A+ +V+ A+ K D + +V+ + + LL+
Sbjct: 59 LYIKDIEIELEKLPKVYGGGASSLYATRRFNEVLIHAEDEAKRFKDEYTSVEHIYMALLK 118
Query: 120 DSQIGD--LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QA 175
+ +F G+ + + + + K+R + ++ S + + T+ ALK +GRDLVE ++
Sbjct: 119 EKNTPSQTIFIRFGITLEKFMAALGKVRSNQ--RITSKNPEETYDALKRFGRDLVELAKS 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD EIRR +RILSRRTKNNPVLIGEPGVGKTAVVEGLAQRI++GDVP L D
Sbjct: 177 GKLDPVIGRDAEIRRAIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKGDVPEGLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ ALDMGAL+AGAKYRGEFEERLKAVL +V ++ G++ILFIDE+H ++GAG+ EG+MD
Sbjct: 237 KTIFALDMGALIAGAKYRGEFEERLKAVLNDVNKSNGRIILFIDELHNIVGAGKAEGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYRKY+EKDAA ERRFQ + V +P+V DT+SILRGLK
Sbjct: 297 AGNILKPMLARGELHCIGATTLDEYRKYIEKDAALERRFQPIVVDQPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E++E HHGVRI D A++ + LS RYI+ R LPDKAIDL+DEA A +R ++DS P E+D
Sbjct: 357 ERFEIHHGVRITDSAIIACSVLSNRYISDRFLPDKAIDLMDEAAAMIRTEIDSMPTELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ MQLEIE AL+KE+D+AS+ RL + KE+ L++K + +++ EKE I +
Sbjct: 417 IQRRIMQLEIERQALKKEEDEASRERLSTLEKEISSLKEKSDGMKAQWEMEKENIKREKE 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLEGNQSDENLMLTETVGP 534
LK++ EE+ ++EAER YDL + A L++G + E++ ++ + + +S+E ++L E V
Sbjct: 477 LKEQIEEVKRQIEEAERSYDLDKLAVLKHGRLPELQRSLEEEKQRKKSNEGVLLKEEVTE 536
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGR 583
++IAE+VSRWTGIPVTRL +NE+++L+ L EAV AV+ +V+R+R+GL
Sbjct: 537 EEIAEIVSRWTGIPVTRLVENERDKLLNLEELLHKRVVGQDEAVTAVSNAVIRARSGLKD 596
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P++P GSF+FLGPTGVGKTELAKAL++ LFD + +VRIDMSEYME+H+V+RLIGAPPGY
Sbjct: 597 PRKPIGSFIFLGPTGVGKTELAKALSQALFDSDENVVRIDMSEYMEKHAVARLIGAPPGY 656
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR+PY V+LFDE+EKAH VFN LLQ+LDDGRLTD QGRTVDF+NTV
Sbjct: 657 VGYEEGGQLTEAVRRKPYCVILFDEIEKAHPEVFNVLLQLLDDGRLTDSQGRTVDFKNTV 716
Query: 704 IIMTSNLGAEHLLS--GMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSN+G++HLL+ G G++ + R+ VL E+ +HF+PE LNR+DE+V+F PL +
Sbjct: 717 VIMTSNIGSQHLLNAIGADGEID-ENTREYVLGELNRHFKPEFLNRVDEVVLFKPLRKAE 775
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ L + D+ RL +R + L V++AA + +Y+P++GARP++R+++K + TE+
Sbjct: 776 IVKIIDLALADIQRRLDDRRIGLKVSEAAKQYMAQNAYNPVFGARPVKRYMQKFIETEIG 835
Query: 822 RMLVREEIDENSTVYID 838
+ ++ E+ E ++ID
Sbjct: 836 KRIINGEVSEGKNIHID 852
>gi|356568712|ref|XP_003552554.1| PREDICTED: chaperone protein ClpB3, chloroplastic-like [Glycine
max]
Length = 974
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/860 (51%), Positives = 602/860 (70%), Gaps = 32/860 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT +AI + E+A H HL ALL +G+ + + G +N R
Sbjct: 83 EFTEMAWQAIVSSPEVAKENKHQIVETEHLMKALLEQKNGLARRIFSKVGVDNT-----R 137
Query: 65 VFNQAMKKLPSQTPAPDEIPASTT---LIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ K + Q E S L +I+RA+ +K +GD+ ++V+ L+L +D
Sbjct: 138 LLEATDKYIQRQPKVLGESSGSMLGRDLEALIQRARDHKKKYGDSFVSVEHLVLAFTQDQ 197
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGKL 178
+ G F++ ++ +KS +E +RG++ + G ++AL+ YG+DL + +AGKL
Sbjct: 198 RFGKQFFRDFQISEPALKSAIESVRGRQSVIDQDPEG--KYEALEKYGKDLTAMAKAGKL 255
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L D RL
Sbjct: 256 DPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALMDRRL 315
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAKYRGEFE+RLKAVLKEV E++G+ ILFIDEIH V+GAG T G+MDA N
Sbjct: 316 ISLDMGALIAGAKYRGEFEDRLKAVLKEVTESDGQTILFIDEIHTVVGAGATNGAMDAGN 375
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +P+V DT+SILRGL+E+Y
Sbjct: 376 LLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTISILRGLRERY 435
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDEA A +++++ S+P +D + R
Sbjct: 436 ELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEINR 495
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
++LE+E +L + DKASK RL + EL L++K L +++ EK + I+ +K+
Sbjct: 496 SVLKLEMERLSLMNDTDKASKDRLNRLEAELSLLKEKQAELTEQWEHEKSVMTRIQSIKE 555
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG++ +++E+A +L+ + ML E V
Sbjct: 556 EIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLESAEKELDEYMNSGKSMLREEVTG 615
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGR 583
+ IAE+VS+WTGIPV++L Q+E+E+L+ L E AV A+AE++ RSRAGL
Sbjct: 616 NDIAEIVSKWTGIPVSKLQQSEREKLLHLEEVLHKRVVGQDPAVKAIAEAIQRSRAGLSD 675
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+F+GPTGVGKTELAKALA LF+ E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 676 PHRPIASFMFMGPTGVGKTELAKALAAYLFNTEEALVRIDMSEYMEKHAVSRLIGAPPGY 735
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTE VRRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QGRTV F NTV
Sbjct: 736 VGYEEGGQLTEIVRRRPYAVILFDEIEKAHADVFNVFLQILDDGRVTDSQGRTVSFTNTV 795
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEV----RKHFRPELLNRLDEIVVFDPLSH 759
IIMTSN+G++++L+ ++A + + Q V R FRPE +NR+DE +VF PL
Sbjct: 796 IIMTSNVGSQYILNTDDDTTPKELAYETIKQRVMDAARSIFRPEFMNRVDEYIVFQPLDR 855
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
EQ+ + RLQ++ V R+A+R + + VTDAA+ ++ + YDP YGARP++R +++ V E
Sbjct: 856 EQISSIVRLQLERVQKRIADRKMKIQVTDAAVQLLGSLGYDPNYGARPVKRVIQQNVENE 915
Query: 820 LSRMLVREEIDENSTVYIDA 839
L++ ++R E E + ID
Sbjct: 916 LAKGILRGEFKEEDAIIIDT 935
>gi|317501995|ref|ZP_07960179.1| ATP-dependent chaperone ClpB [Lachnospiraceae bacterium 8_1_57FAA]
gi|336440022|ref|ZP_08619621.1| chaperone ClpB [Lachnospiraceae bacterium 1_1_57FAA]
gi|316896675|gb|EFV18762.1| ATP-dependent chaperone ClpB [Lachnospiraceae bacterium 8_1_57FAA]
gi|336014371|gb|EGN44220.1| chaperone ClpB [Lachnospiraceae bacterium 1_1_57FAA]
Length = 870
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/857 (51%), Positives = 607/857 (70%), Gaps = 25/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN ++FT + +A+ ++A G+ + HL ALL+ + + + Q
Sbjct: 1 MNINRFTQNSIQAVQNCEKIAADNGNQELAQEHLLYALLTQDDSLILKLFEKMNIQ--GQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
+QA+ K P ++ L V+ A+ K GD +++V+ L L LL+
Sbjct: 59 LLINRVDQAIGKRPKVQGG--QLFVGQDLNNVLIHAEDEAKQMGDEYVSVEHLFLSLLKY 116
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
++ +++E G++ + +RG + +V S + T+ L YG+DLVE+A
Sbjct: 117 ASKEMKQIYREFGISREGFLHALSTVRGNQ--RVTSDHPEATYDTLNKYGQDLVERARDQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP L D
Sbjct: 175 KLDPVIGRDEEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVNGDVPEGLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMGALVAGAKYRGEFEERLKAVL+EV+ ++GK+ILFIDE+H ++GAG+T+G+MDA
Sbjct: 235 TIFSLDMGALVAGAKYRGEFEERLKAVLEEVKNSDGKIILFIDELHTIVGAGKTDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V D +SILRGLKE
Sbjct: 295 GNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVLVDEPTVEDAISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D L
Sbjct: 355 RYEVFHGVKITDSALVAAAMLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELDEL 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
R+ MQLEIE AL+KE+D+ S+ RL +++EL L+++ ++++ EK ++ ++++
Sbjct: 415 RRRIMQLEIEEEALKKEEDRLSRERLEHLQEELAGLKEEYAGEKVQWENEKHSVERVQKI 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+++ E + + +A+R YDL +AA L+YG + +++ + + E ++ L L E V +
Sbjct: 475 REEIEHVNKEISKAQREYDLNKAAQLQYGELPQLQKQLEEEEEKVREKELSLVHEAVTDE 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA +VSRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+ P
Sbjct: 535 EIARIVSRWTGIPVAKLNESERNKTLHLADELHKRVIGQDEGVELVTEAIIRSKAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALA+ LFDDEN +VRIDMSEYME++SVSRLIGAPPGYV
Sbjct: 595 SKPIGSFLFLGPTGVGKTELAKALAQSLFDDENNMVRIDMSEYMEKYSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT++
Sbjct: 655 GYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTIL 714
Query: 705 IMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+GA +LL G+ G ++ + A+D + ++R HFRPE LNRLDEI++F PL+ E +
Sbjct: 715 IMTSNIGAGYLLDGIKEDGSISKE-AQDMAMNDLRAHFRPEFLNRLDEIIMFKPLTKENI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
R + L + DV RL E+ + + +T+AA D ++ YDP+YGARP++R+L+K V T +R
Sbjct: 774 RAIIDLLVADVNRRLEEKELTIELTEAAKDCIVEGGYDPMYGARPLKRYLQKNVETLAAR 833
Query: 823 MLVREEIDENSTVYIDA 839
+++ + T+ IDA
Sbjct: 834 LILAGNVGREDTILIDA 850
>gi|254820195|ref|ZP_05225196.1| chaperone ClpB [Mycobacterium intracellulare ATCC 13950]
gi|379749397|ref|YP_005340218.1| chaperone ClpB [Mycobacterium intracellulare ATCC 13950]
gi|379756717|ref|YP_005345389.1| chaperone ClpB [Mycobacterium intracellulare MOTT-02]
gi|379764243|ref|YP_005350640.1| chaperone ClpB [Mycobacterium intracellulare MOTT-64]
gi|387878094|ref|YP_006308398.1| chaperone ClpB [Mycobacterium sp. MOTT36Y]
gi|406032990|ref|YP_006731882.1| chaperone protein clpB [Mycobacterium indicus pranii MTCC 9506]
gi|443307877|ref|ZP_21037664.1| chaperone ClpB [Mycobacterium sp. H4Y]
gi|378801761|gb|AFC45897.1| chaperone ClpB [Mycobacterium intracellulare ATCC 13950]
gi|378806933|gb|AFC51068.1| chaperone ClpB [Mycobacterium intracellulare MOTT-02]
gi|378812185|gb|AFC56319.1| chaperone ClpB [Mycobacterium intracellulare MOTT-64]
gi|386791552|gb|AFJ37671.1| chaperone ClpB [Mycobacterium sp. MOTT36Y]
gi|405131535|gb|AFS16790.1| Chaperone protein clpB [Mycobacterium indicus pranii MTCC 9506]
gi|442765245|gb|ELR83243.1| chaperone ClpB [Mycobacterium sp. H4Y]
Length = 848
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/866 (52%), Positives = 604/866 (69%), Gaps = 42/866 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + A++AG+ + P HL +ALL+ GI A + G A
Sbjct: 4 FNP---TTKTQAALTSALQAASAAGNPEIRPAHLLMALLTQADGIAAPLLEAVGVAPATI 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
AE + +++LP + A + S + I AQ D +++ + L++GL
Sbjct: 61 RAE--AERLLERLPQASGASSQPQLSRESLAAITTAQQLATEMDDEYVSTEHLMVGLATG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
DS + L G + ++ K+RG +V SA + T+QAL+ Y DL +A GK
Sbjct: 119 DSDVAKLLTGHGASPQALREAFVKVRGSA--RVTSADPEATYQALEKYSTDLTARAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+I+LD+G++VAGAKYRGEFEERLKAVL +++ + G++I FIDE+H ++GAG T EG+MDA
Sbjct: 237 VISLDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV V EPSV DTV ILRGLK+
Sbjct: 297 GNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKD 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +++++DS+P EID +
Sbjct: 357 RYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLKMEIDSRPVEIDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE AL KE+D+ASK RL ++R EL D ++KL L R++ EK ID +R L
Sbjct: 417 ERLVRRLEIEEMALAKEEDEASKERLEKLRSELADQKEKLAELTTRWQNEKNAIDVVREL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVE----AAIGQLEGNQSDENLMLTETV 532
K++ E L + AER DLA+AA+LRYG I EVE AA+ Q E EN+ML E V
Sbjct: 477 KEQLEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAEAR---ENVMLKEEV 533
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
GPD IA+VVS WTGIP R+ + E +R+IG +AV AV+++V R+RAG+
Sbjct: 534 GPDDIADVVSAWTGIPAGRMLEGETAKLLRMEDELGKRVIGQRKAVTAVSDAVRRARAGV 593
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +PTGSF+FLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RL+GAPP
Sbjct: 594 ADPNRPTGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPP 653
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GY+G+++GGQLTEAVRRRPY+V+LFDE+EKAH VF+ LLQVLD+GRLTDGQGRTVDFRN
Sbjct: 654 GYIGYDQGGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRN 713
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T++I+TSNLG+ +QV+ VR F+PE +NRLD+++VF L +
Sbjct: 714 TILILTSNLGSGG-------------TEEQVMAAVRSAFKPEFINRLDDVIVFAGLEPGE 760
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L + +Q+ + RLA+R + L V+ A + +DP+YGARP+RR +++ + +L+
Sbjct: 761 LVAIVDIQLAQLQKRLAQRRLTLEVSLPAKQWLAHRGFDPVYGARPLRRLVQQAIGDQLA 820
Query: 822 RMLVREEIDENSTVYIDASPKGDNLV 847
++L+ ++ + TV ++ SP GD+L+
Sbjct: 821 KLLLAGDVHDGDTVPVNVSPDGDSLI 846
>gi|116333409|ref|YP_794936.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus brevis ATCC 367]
gi|116098756|gb|ABJ63905.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus brevis ATCC 367]
Length = 870
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/867 (51%), Positives = 613/867 (70%), Gaps = 27/867 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP+K T A+A A +A + H T HL L P + Q +AG + A
Sbjct: 1 MNPEKMTEALTSALAEAQRIAVTRQHQAVTVAHL-FKFLVQPGELARQLFQDAGVDVTAL 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEI--PASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL- 117
E ++ + + + T + + S L +++++A + A+ D +A+D ++L +
Sbjct: 60 DHE--LDRELDSISTVTGSGVQYGQEFSRNLTELLQKADQIRDAYHDDFMALDTVVLAVM 117
Query: 118 -LEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--Q 174
L + D K+ G+ ++++ V+ LRG G +V S + + ++AL+ YG DLV+ +
Sbjct: 118 QLNGEALTDYLKQQGLTEKKLRAAVDDLRG--GERVTSKNQEDQYKALEKYGTDLVKAMR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GK+DP+IGRD+EI V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP NL
Sbjct: 176 SGKIDPIIGRDDEILSVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPDNLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + +LDMGAL+AGAKYRGEFEERLKAVLKEV +++G++I+FIDEIH ++GAG+TEGSM
Sbjct: 236 DKTIFSLDMGALIAGAKYRGEFEERLKAVLKEVTKSDGQIIMFIDEIHNIVGAGKTEGSM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L IGATTL+EYR+Y+E+D A ERRFQ+V V EPSV DTV+ILRGL
Sbjct: 296 DAGNLLKPMLARGELHLIGATTLDEYRQYLEQDKALERRFQRVLVNEPSVADTVTILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
+E++E HHGV+I D AL+ AA+LS RY+T R LPDKAIDLVDEA A++RV+++S P E+D
Sbjct: 356 RERFEIHHGVKIHDNALIAAAKLSDRYLTDRFLPDKAIDLVDEASASIRVEMNSAPTELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
R+ M++++E AL++E D+ASK RL +++KEL D ++++ L R+ +EK I ++
Sbjct: 416 QARRQLMRMQVEQTALKQETDEASKQRLSDLQKELADTKERVDHLSARWNQEKSAIKQLG 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
K + ++ L+ AE YDL RAA+L++G I ++E + LE ++ +++E+V
Sbjct: 476 DKKTELDQAKRELENAESAYDLNRAAELQHGTIPQLEKELADLEQTDQQQDWLVSESVTE 535
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGR 583
++IA VVSR TGIPVT+L Q E+E+L+ LA +AV+AVA++VLRSRAGL
Sbjct: 536 NEIAAVVSRMTGIPVTKLVQGEREKLLKLADHLHERVVGQDQAVSAVADAVLRSRAGLQD 595
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAKALAE LFD E+ +VRIDMSEYME+ SVSRL+GA PGY
Sbjct: 596 PTKPLGSFLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKESVSRLVGAAPGY 655
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR PY++VLFDEVEKAH VFN LLQVLDDGRLTD QGRTVDF+NT+
Sbjct: 656 VGYEEGGQLTEAVRRNPYTIVLFDEVEKAHPDVFNLLLQVLDDGRLTDSQGRTVDFKNTI 715
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSNLG+E LL G G+++ + A+ QV Q ++ HFRPE LNR+DE ++F PLS
Sbjct: 716 LIMTSNLGSELLLQGTDDQGRIS-EDAKKQVAQLLQSHFRPEFLNRIDETIMFTPLSLAD 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++ + +A RL E+ + L +T AA + Y P YGARP++R++ V T L+
Sbjct: 775 VEQIVVKLIDHLATRLHEQQLDLTITPAAQTWIAKAGYLPAYGARPLQRFITTHVETPLA 834
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVY 848
R L+ I NS + ID + D L +
Sbjct: 835 RELIAGTIPANSLITIDVA--DDQLTF 859
>gi|380032689|ref|YP_004889680.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
plantarum WCFS1]
gi|54035837|sp|Q88VX7.1|CLPB_LACPL RecName: Full=Chaperone protein ClpB
gi|342241932|emb|CCC79166.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
plantarum WCFS1]
Length = 867
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/880 (51%), Positives = 616/880 (70%), Gaps = 47/880 (5%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP++FT +A+ A ++A + H + HL L+ P + Q + AG +
Sbjct: 1 MNPEQFTESLQQALQQAQQIAQTRRHQEIGVPHL-FKFLTQPGELVRQIFSEAGAD---- 55
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA------------STTLIKVIRRAQAAQKAHGDTHL 108
+Q +L + D+I S++L +++ A A +KA GD +L
Sbjct: 56 -----LDQLQTELDREL---DDIAVVSGGNVQYGGSMSSSLATLMQAADAKRKALGDDYL 107
Query: 109 AVDQLILGLLEDS--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKT 166
A D L L L++ + Q+ + G+ +VK+ V+++RG G++V S + + +QAL+
Sbjct: 108 ATDTLALALMDQTGDQLTKYLNQQGITAGQVKNAVDRIRG--GQRVTSRNQEDQYQALEK 165
Query: 167 YGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRI 224
YG DLV+QA G DPVIGRDEEI V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRI
Sbjct: 166 YGVDLVKQARQGNQDPVIGRDEEILDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRI 225
Query: 225 VRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLV 284
VRGDVP NL D L +LDMG+L+AGAKYRGEFEERLKAVLKE+++++G++I+FIDEIH +
Sbjct: 226 VRGDVPENLKDKTLFSLDMGSLIAGAKYRGEFEERLKAVLKEIKKSDGQIIMFIDEIHNI 285
Query: 285 LGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV 344
+GAG+TEGSMDA NL KPMLARG+L IGATTL+EYR+Y+EKD A ERRFQ+V VAEPSV
Sbjct: 286 VGAGKTEGSMDAGNLLKPMLARGELHLIGATTLDEYRQYMEKDKALERRFQKVLVAEPSV 345
Query: 345 PDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRV 404
DT+SILRGLKE++E HHGVRI D ALV AA+LS RYIT R+LPDKA+DLVDEA A +RV
Sbjct: 346 EDTISILRGLKERFEIHHGVRIHDNALVAAAKLSDRYITDRYLPDKALDLVDEASAEIRV 405
Query: 405 QLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYK 464
+++S P E+D + R+ M+LE+E AL+KE D AS RL +V+KEL ++K + L R+
Sbjct: 406 EMNSNPTELDQVNRQLMRLEVEEAALKKETDDASVKRLADVQKELASAKEKQRTLSERWD 465
Query: 465 KEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE 524
EK+ + + K ++ L+ AE YDL +AA L++G I ++E + +E N E
Sbjct: 466 SEKKSLQALSDKKSALDKAKHDLENAENNYDLEQAAKLQHGTIPKLEQELKAMEANDHHE 525
Query: 525 NLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAES 573
+ ++ E+V PDQIA VVSR TGIPV +L E+E+L+ LA+ AV+AV+++
Sbjct: 526 DWLVEESVTPDQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDA 585
Query: 574 VLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV 633
VLRSRAGL P +P GSF+FLGPTGVGKTELAKALAE LFD ++ +VRIDMSEYME+ SV
Sbjct: 586 VLRSRAGLQDPNRPLGSFMFLGPTGVGKTELAKALAENLFDADDHMVRIDMSEYMEKESV 645
Query: 634 SRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQ 693
SRL+GA PGYVG+EEGGQLTEAVRR PYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQ
Sbjct: 646 SRLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTDGQ 705
Query: 694 GRTVDFRNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEI 751
GRTVDF+NT++IMTSNLG+E LL+G+ G ++ + QV+Q V+ F+PE LNR+D+I
Sbjct: 706 GRTVDFKNTILIMTSNLGSELLLAGVDDQGHLSADTHQ-QVMQLVQSRFKPEFLNRIDDI 764
Query: 752 VVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRW 811
++F PL + ++ + ++ RL +R + L ++D A + + Y+P YGARP+RR+
Sbjct: 765 IMFTPLQLGAIEEIVVKLIDRLSARLQDREITLKISDEAKKWIAKQGYEPAYGARPLRRF 824
Query: 812 LEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+ V T L++ ++ + STV I+ D+LV+ Q
Sbjct: 825 ITNHVETPLAKEIIAGRVAPKSTVAINLM--DDHLVFENQ 862
>gi|420237302|ref|ZP_14741773.1| ATP-dependent chaperone ClpB [Parascardovia denticolens IPLA 20019]
gi|391879573|gb|EIT88079.1| ATP-dependent chaperone ClpB [Parascardovia denticolens IPLA 20019]
Length = 879
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/875 (52%), Positives = 612/875 (69%), Gaps = 40/875 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T EA+ A + A++AG+ Q PLHL +LL G+ + G + Q
Sbjct: 1 MN-EKYTTLAQEALGDAIQSASAAGNPQVEPLHLLDSLLRQDGGVVRGLVQATGAD--PQ 57
Query: 61 SAERVFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
S +A+ KLPS + + P S L +VI AQ K D +++ + L++G+
Sbjct: 58 SIGAQTRRALAKLPSASGSATAQPDGSRQLSQVIASAQKEMKVLEDEYVSTEHLLIGIAA 117
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
D + G++ + AG +V ++ + ++RG G KV S + +++AL+ Y DL EQA G
Sbjct: 118 SDGEAGEILRHAGASVEALRKAIPQVRG--GAKVTSPDAEGSYKALEKYSTDLTEQAREG 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQR+V GDVP+ L D
Sbjct: 176 KLDPVIGRDSEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVAGDVPTGLRDK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
++++LDM ++VAG+KYRGEFEER+KAVL E+++++G++I FIDEIH ++GAG TEGSMDA
Sbjct: 236 KIVSLDMSSMVAGSKYRGEFEERMKAVLDEIKKSDGRIITFIDEIHTIVGAGATEGSMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DTV+ILRGLK+
Sbjct: 296 GNMLKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTVAILRGLKQ 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS+PEEID L
Sbjct: 356 RYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSEPEEIDEL 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +LE+E L+K +D AS+ RL +++ EL D R+KL L R+ EK +++ L
Sbjct: 416 QRRVTRLEMEEMQLKKSQDTASQERLAKIQSELADTREKLAGLNARWSAEKAGHNKVGDL 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVE--------------AAIGQLEGNQS 522
+ K ++L +A R DL A+ + YG I ++ AA G +S
Sbjct: 476 RAKLDDLRVQADKATREGDLEHASRILYGEIPQIRKELAAAEDSASAETAATGP--DGES 533
Query: 523 DENLMLTETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVA 571
+ M+ + V D IA +VS WTGIPV RL G+NEK +R+IG EAV AV+
Sbjct: 534 AQEPMVPDHVDADSIASIVSSWTGIPVGRLMQGENEKLLHMEEVLGKRVIGQKEAVAAVS 593
Query: 572 ESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQH 631
++V RSRAG+ +PT SFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+
Sbjct: 594 DAVRRSRAGISDLDRPTASFLFLGPTGVGKTELAKALADFLFDDEKAIVRIDMSEYMEKE 653
Query: 632 SVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTD 691
SVSRLIGA PGY+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTD
Sbjct: 654 SVSRLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTD 713
Query: 692 GQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEI 751
GQGRTVDF+NT++I+TSNLG++ L+ + + A V+ V HF+PE LNRLD++
Sbjct: 714 GQGRTVDFKNTILILTSNLGSQFLVDSGLDADQRKSA---VMDAVHAHFKPEFLNRLDDM 770
Query: 752 VVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRW 811
+VF+PL+ ++L + +Q+ VA RL ER + L VTD+A + + YDP YGARP+RR
Sbjct: 771 IVFNPLTRDELAGIVDIQVARVADRLKERRITLDVTDSAREWLADTGYDPAYGARPLRRL 830
Query: 812 LEKKVVTELSRMLVREEIDENSTVYIDASPKGDNL 846
++ +V +L+RML+ ++ + TV +D + GD+L
Sbjct: 831 VQNEVGDQLARMLLAGQVHDGDTVLVDQT-GGDHL 864
>gi|336324863|ref|YP_004604829.1| ATP-dependent Clp protease [Corynebacterium resistens DSM 45100]
gi|336100845|gb|AEI08665.1| ATP-dependent Clp protease [Corynebacterium resistens DSM 45100]
Length = 860
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/870 (52%), Positives = 598/870 (68%), Gaps = 41/870 (4%)
Query: 7 THKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAERVF 66
T KT EA+ A + A++ G+ P HL VALL I + AG E +A V
Sbjct: 7 TTKTQEAMQAALQSASAKGNPDIRPAHLLVALLEQDDSIALPVLQAAGVEPSA-----VL 61
Query: 67 NQAMKKLPSQTPAPDEIPASTTL----IKVIRRAQAAQKAHGDTHLAVDQLILGLLE-DS 121
+A + + A A+ + + AQ GDT+++ + L+ G+ + DS
Sbjct: 62 TEARNLVAAYPQATGSNMANPQFNRDALNALTAAQELAGELGDTYVSTEVLMAGIAKGDS 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ L G + +K+ + +RG RKV + + FQAL+ Y DL +A GK+D
Sbjct: 122 EAATLLNSKGASFDAIKTAFQSVRGN--RKVTTEEPEGQFQALEKYSTDLTARARAGKID 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLA+RIV GDVP +L +LI
Sbjct: 180 PVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLRGKKLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAAN 298
+LD+G++VAGAKYRGEFEERLKAVL E++EAEG+VI FIDE+H ++GAG + +MDA N
Sbjct: 240 SLDLGSMVAGAKYRGEFEERLKAVLDEIKEAEGEVITFIDELHTIVGAGAGGDSAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
+ KP+LARG+LR +GATTL+EYR+Y+EKDAA ERRFQQVYV EP+V DTV ILRGLKE+Y
Sbjct: 300 MIKPLLARGELRLVGATTLDEYRQYIEKDAALERRFQQVYVGEPTVEDTVGILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEEIDN+ER
Sbjct: 360 EVHHGVRIQDSALVAAASLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDNVER 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+LEIE AL KE D ASK RL +R EL D ++KL L R++ EK ID +R LK+
Sbjct: 420 VVRRLEIEEMALAKETDAASKERLERLRSELADEKEKLAGLTARWENEKGSIDSLRALKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTETVGPDQ 536
+ + L + AER + A+ A+LRYG I +VE + + E + E +MLTE V PD
Sbjct: 480 ELDNLRRESEIAEREGNFAKVAELRYGRIPDVEKQLAEAEETVAEQQEGMMLTEEVTPDT 539
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
IA+VVS WTG+P ++ Q E E R++G +AV+AV+++V RSRAG+ P
Sbjct: 540 IADVVSAWTGVPAGKMLQGETEKLLNMELVLAGRVVGQEKAVDAVSDAVRRSRAGVADPN 599
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+PTGSFLFLGPTGVGKTELAK LAE LFDDE +VRIDMSEY E+HSV+RL+GAPPGYVG
Sbjct: 600 RPTGSFLFLGPTGVGKTELAKGLAEFLFDDETAMVRIDMSEYGEKHSVARLVGAPPGYVG 659
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++ GGQLTEAVRRRPY+VVLFDEVEKAH VF+ LLQVLD+GRLTDGQGRTVDFRNT++I
Sbjct: 660 YDAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILI 719
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
+TSNLGA ++V++ V++ F+PE +NRLD++++FDPLS EQL +
Sbjct: 720 LTSNLGAGG-------------TDEEVMEAVKRAFKPEFINRLDDVLIFDPLSEEQLESI 766
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q++ + RLA R + L VTD A + Y+P YGARP+RR ++K + +L++ L+
Sbjct: 767 VSIQLRGLGERLAARRLVLDVTDDAKKWLAERGYEPAYGARPLRRLIQKAIGDQLAKKLL 826
Query: 826 REEIDENSTVYIDASPKGDNLVYRVQKNGG 855
EI + TV +D D V + G
Sbjct: 827 GGEIRDGDTVRVDTETSDDGQAELVVSSAG 856
>gi|331082733|ref|ZP_08331856.1| chaperone ClpB [Lachnospiraceae bacterium 6_1_63FAA]
gi|330400352|gb|EGG79994.1| chaperone ClpB [Lachnospiraceae bacterium 6_1_63FAA]
Length = 863
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/866 (50%), Positives = 605/866 (69%), Gaps = 29/866 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ +A+ + A G+ + HL LL + + I E
Sbjct: 1 MNISKFTQKSLQAVQDLEKTAYEFGNQEVEQEHLLYNLLKQEDSLILKLI-----EKMEI 55
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
E N+ + L ++T P L K + A+ + GD +++V+ L L LL
Sbjct: 56 QKEHFLNRVEQALNARTKVSGGQPYIGQYLNKALVTAEDEARTMGDEYVSVEHLFLALLN 115
Query: 120 DSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ + ++ E G+ R + +RG + +V + + + T+ L YG+DLVE+A
Sbjct: 116 NPSPSMKKIWNEYGITRERFLQALSTVRGNQ--RVTTDNPEVTYDTLNKYGQDLVEKARE 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA VEGLAQRIV+GDVP L D
Sbjct: 174 QKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAAVEGLAQRIVQGDVPEGLKD 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
++ ALDMGALVAGAKYRGEFEERLKAVL+EV ++EG++ILFIDE+HL++GAG+T+G+MD
Sbjct: 234 KKIFALDMGALVAGAKYRGEFEERLKAVLEEVRKSEGQIILFIDELHLIVGAGKTDGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V DT+SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVTVDEPTVEDTISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 ERYEVFHGVKITDSALVAAATLSDRYISDRFLPDKAIDLVDEACALIKTELDSMPTELDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ RK MQ+EIE AL+KE D+ S+ RLV ++KE+ +LRD ++ EK ++ +++
Sbjct: 414 MRRKIMQMEIEEAALKKENDRLSQDRLVALQKEMAELRDSFNAQKAQWDNEKSTVERLQK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
L+++ E++ +Q+A+R YDL AA L+YG + +++ + E +++L L E+V
Sbjct: 474 LREQIEDMNNRIQKAQRNYDLDEAAKLQYGELPKLQKQLQAEEEKVKNQDLSLVHESVTD 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA ++SRWTGIPV +L + E+ +R+IG E V V ++++RS+AG+
Sbjct: 534 EEIARIISRWTGIPVAKLTEGERTKILHLEEELHKRVIGQDEGVTKVTDAIIRSKAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAK LA LFDDE +VRIDMSEYME++SVSRLIGAPPGY
Sbjct: 594 PTKPIGSFLFLGPTGVGKTELAKTLAATLFDDEQNMVRIDMSEYMEKYSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 654 VGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSN+G+ +LL G+ G++ Q AR+ V +++R HFRPE LNRLDE+++F PL+ +
Sbjct: 714 LIMTSNIGSPYLLEGIEENGEIK-QEAREAVERDLRAHFRPEFLNRLDEMIMFKPLTKDN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L + D+ RL ++ +++ +T AA D ++ YDP+YGARP++R+++K V T +
Sbjct: 773 IGGIVELLLADLNKRLKDQELSIELTKAAKDYIIEGGYDPVYGARPLKRYVQKYVETLTA 832
Query: 822 RMLVREEIDENSTVYIDASPKGDNLV 847
++++ I S + ID + D LV
Sbjct: 833 KLILAGNISAGSRIVIDV--ENDELV 856
>gi|449296272|gb|EMC92292.1| hypothetical protein BAUCODRAFT_38324 [Baudoinia compniacensis UAMH
10762]
Length = 937
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/887 (50%), Positives = 604/887 (68%), Gaps = 61/887 (6%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDP--------------------SG 44
+FT + +A++ A +LAT H+Q P+HL VALL P +
Sbjct: 6 QFTDRATQALSDAQDLATQYAHSQMLPIHLGVALLDPPPDQSKDQQTNHAHESHATSSAP 65
Query: 45 IFAQAINNAGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHG 104
+F Q + A G+ Q +R +A+ +LPSQ P P+ + S KV+R A K
Sbjct: 66 LFKQVVERAHGD--PQLLDRALKKALVRLPSQDPPPESVSVSPAFSKVLRAANELSKTQK 123
Query: 105 DTHLAVDQLILGLLEDSQIGDLFKEAGVAVAR-VKSEVEKLRGKEGRKVESASGDTT--F 161
D+++AVD LI L++D+ + E+ V + + + ++++RG R+V+S + D
Sbjct: 124 DSYIAVDHLIQCLVQDATVQRCLAESNVPNTKLIDTAIQQIRGT--RRVDSKTADAEEEH 181
Query: 162 QALKTYGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEG 219
+ LK + D+ A GK+DPVIGR+EEIRRV+RILSRRTKNNPVLIGEPGVGKT VVEG
Sbjct: 182 ENLKKFTIDMTALAREGKMDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTVVEG 241
Query: 220 LAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFID 279
LAQRIV DVP+NLA +L++LD+G+LVAG+KYRGEFEER+K VLKE+E+++ ++LF+D
Sbjct: 242 LAQRIVNADVPANLAACKLLSLDVGSLVAGSKYRGEFEERMKGVLKEIEDSKEMIVLFVD 301
Query: 280 EIHLVLGAGRT-EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVY 338
EIHL++GAG + EG MDAANL KPMLARGQL CIGATTL EYRKY+EKD AFERRFQQV
Sbjct: 302 EIHLLMGAGSSGEGGMDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDQAFERRFQQVL 361
Query: 339 VAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEA 398
V EPSVP+TVSILRGLKEKYE HHGV I D A+V AA L++RY+T R LPD A+DL+DEA
Sbjct: 362 VKEPSVPETVSILRGLKEKYEVHHGVTILDGAIVAAATLASRYLTQRRLPDSAVDLIDEA 421
Query: 399 CANVRVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQP 458
A VRV +SQPE +DN+ERK QLEIE+HALE+EKD ASK RL + E + ++L+P
Sbjct: 422 AAAVRVTRESQPEVLDNMERKLRQLEIEIHALEREKDDASKTRLSHAKAEKANTEEELKP 481
Query: 459 LMMRYKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE 518
L +Y+ EK R EI+ K K ++L QEAER DL A+DL+Y AI +VEA I QLE
Sbjct: 482 LREKYESEKARSKEIQEQKIKLDQLKVKQQEAERTRDLQTASDLKYYAIPDVEARIEQLE 541
Query: 519 GNQS-------------DENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL----- 560
+ DE L + + VGPDQI E+V+RWTGIPVTRL EK++L
Sbjct: 542 HQKKEVEQSESGRRGSVDEKL-VADAVGPDQINEIVARWTGIPVTRLKTTEKDKLLQMEK 600
Query: 561 ------IGLAEAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFD 614
+G EAV +VA ++ R+GL P QP SFLF GP+G GKT L KALAE LFD
Sbjct: 601 VLGAQVVGQKEAVTSVANAIRLQRSGLSNPGQPP-SFLFCGPSGTGKTLLTKALAEFLFD 659
Query: 615 DENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHI 674
D ++R+DMSEY E+HS+SR+IGAPPGYVGH+ GGQLTEA+RRRP+S++LFDEVEKA
Sbjct: 660 DPKAMIRLDMSEYQERHSLSRMIGAPPGYVGHDAGGQLTEALRRRPFSILLFDEVEKAAK 719
Query: 675 SVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLL--SGMMGKVTMQVARDQV 732
V LLQ++DDGR+TDGQGR +D RN +++MTSNLGAE+L + G++ ++ V
Sbjct: 720 EVLTVLLQLMDDGRITDGQGRVIDARNCIVVMTSNLGAEYLSRPNAPDGRID-PTTKELV 778
Query: 733 LQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERG--VALAVTDAA 790
+ +R +F PE LNR+ IV+F+ LS +++RK+ +++ ++ RL G V + ++DA
Sbjct: 779 MNALRNYFLPEFLNRISSIVIFNRLSKKEIRKIVDVRLTEIQQRLTSNGRNVKIQLSDAV 838
Query: 791 LDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYI 837
D + + Y P YGARP++R +EK+V+ L+ +++R + + T +
Sbjct: 839 KDYLGSAGYSPAYGARPLQRLIEKEVLNRLAVLILRGAVRDGETARV 885
>gi|384914574|ref|ZP_10015358.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Methylacidiphilum
fumariolicum SolV]
gi|384527459|emb|CCG91226.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Methylacidiphilum
fumariolicum SolV]
Length = 868
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/876 (52%), Positives = 626/876 (71%), Gaps = 35/876 (3%)
Query: 4 DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAE 63
++FT K EAIA + +AT GH HL AL++ G+ + + G +
Sbjct: 2 NRFTEKAQEAIAESQAIATKYGHQVVDVEHLLEALITQEGGLVPRILERCG--VPLKLLR 59
Query: 64 RVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
++K P + T A S +++ +A+ K D +++V+ L+L +LE+S
Sbjct: 60 EELENELEKFPRITGTAATTGSYISQRFSELLVKAREEAKRLKDEYVSVEHLLLAMLEES 119
Query: 122 Q---IGDLFKEAGV---AVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
+ LFK G+ + RV +EV RG + +V S + + T++AL+ YGRDL + A
Sbjct: 120 SKTVVARLFKSHGLDRETLLRVLTEV---RGSQ--RVTSPNPEVTYEALEKYGRDLTKLA 174
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRD EIRR +++L RRTKNNPVLIGEPGVGKTA+VEG+AQRIV+GDVP +L
Sbjct: 175 ELGKLDPVIGRDAEIRRTIQVLCRRTKNNPVLIGEPGVGKTAIVEGIAQRIVKGDVPESL 234
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ R++ALDMGAL+AGAKYRGEFEERLKAVLKE+ A+G++ILFIDEIH V+GAG+ EG+
Sbjct: 235 KNRRIVALDMGALIAGAKYRGEFEERLKAVLKEISSAQGQIILFIDEIHTVVGAGKAEGA 294
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
+DA N+ KPMLARG+L CIGATTL+EYRKY+EKDAA ERRFQ V V EP+V DT+SILRG
Sbjct: 295 IDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDAALERRFQPVLVEEPTVEDTISILRG 354
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LK +YE HHGVRIQD ALV AA LS RYI+ R LPDKAIDLVDEA A ++ +++S PEE+
Sbjct: 355 LKNRYEVHHGVRIQDAALVAAAVLSHRYISDRFLPDKAIDLVDEAAAKLKTEMESMPEEL 414
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
++LERK +QLEIE AL KEKD+AS+ RL E+ KEL +LR + + ++ EK I E+
Sbjct: 415 ESLERKVLQLEIEREALRKEKDEASQKRLEELEKELAELRSERDRMRANWEAEKGSIMEL 474
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN----LMLT 529
+ L+++ ++ +++A+R YDL + A+LRYG I + I +LE S+E+ M+
Sbjct: 475 QHLREELQKAEQEIEKAQREYDLNKVAELRYGKIPTLTKQIQELESKISEEDGSKHRMIQ 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSR 578
E V PD IAE+VSRWTGIPV RL + EKE+L +G EAVNAV +++LR+R
Sbjct: 535 EEVTPDLIAEIVSRWTGIPVARLLEGEKEKLLKLDQILHKRVVGQDEAVNAVVDAILRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
+GL P++P GSF+FLGPTGVGKTELA++LAE LFD E ++R+DMSEYME+H+V+RLIG
Sbjct: 595 SGLKDPKRPIGSFIFLGPTGVGKTELARSLAEALFDSEENMIRLDMSEYMEKHTVARLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LQ+L+DGRLTDG GRTVD
Sbjct: 655 APPGYVGFEEGGQLTEAVRRKPYSVLLLDEIEKAHPEVFNLFLQILEDGRLTDGHGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLL-SGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NT+IIMTSN+G+ +L S +MG + R ++++E+R FRPE LNR+DE+V+F PL
Sbjct: 715 FKNTIIIMTSNIGSVYLTESALMGGTIREDVRTKIMEELRAVFRPEFLNRIDEVVIFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
S +++++ LQ+ + RL E+ +AL ++++A + + E Y PIYGARP+RR L++++
Sbjct: 775 SLNEIKQIVDLQLVLIKNRLLEKYIALELSESAKEHLAHEGYSPIYGARPLRRILQREIE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKN 853
T LSR ++ EI E+ V++D K L + ++K+
Sbjct: 835 TPLSRKIIAGEIVEHDHVFVDF--KDGKLHFEIRKS 868
>gi|381190965|ref|ZP_09898477.1| endopeptidase Clp ATP-binding chain B, clpB [Thermus sp. RL]
gi|380451054|gb|EIA38666.1| endopeptidase Clp ATP-binding chain B, clpB [Thermus sp. RL]
Length = 854
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/866 (52%), Positives = 609/866 (70%), Gaps = 34/866 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MN +++T EA+A A LA H HL LL DP + + + AG + A
Sbjct: 1 MNLERWTQAAREALAHAQVLAQKMKHQAIDVAHLWTVLLKDPGALPWRLLEKAGADPKAL 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
++ ER + +LP A + L + RA+A + D ++AVD L+L L
Sbjct: 61 KEAQER----ELARLPKVEGAEVGQYLTRRLSGALNRAEALMEELKDRYVAVDTLVLALS 116
Query: 119 EDSQIGDLFKEAGV-AVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
E + G+ + +K +++LRG G+ V++ ++T+ AL+ YG DL + A
Sbjct: 117 EAT--------PGLPGLETLKKALQELRG--GKTVQTEHAESTYNALEQYGIDLTKLAAE 166
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRRV++IL RRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L
Sbjct: 167 GKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKG 226
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
R+I+L MG+L+AGAKYRGEFEERLKAV++EV +++G+VILFIDE+H V+GAG+ EG++D
Sbjct: 227 KRIISLQMGSLLAGAKYRGEFEERLKAVIQEVIQSQGEVILFIDELHTVVGAGKAEGAVD 286
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KP LARG+LR IGATTL+EYR+ +EKD A ERRFQ VYV EP+V +T+SILRGLK
Sbjct: 287 AGNMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTVEETISILRGLK 345
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D A++ AA LS RYIT R LPDKAIDL+DEA A +R+ L+S PEEID
Sbjct: 346 EKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDA 405
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
LERK++QLEIE AL+KEKD S+ RL + E+ L +K+ L ++KE+E + ++R
Sbjct: 406 LERKKLQLEIEREALKKEKDPDSQERLKAIEAEIQKLSEKIAKLRAEWEKEREILRKLRE 465
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
+ + +E+ ++ AER+YDL RAA+LRYG + ++EA + L + E D
Sbjct: 466 AQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEED 525
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
IAE+VSRWTGIPV++L + E+ +R++G EA+ AVA+++ R+RAGL P
Sbjct: 526 -IAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIKAVADAIRRARAGLKDP 584
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAK LA LFD E ++RIDM+EYME+H+VSRLIGAPPGYV
Sbjct: 585 NRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYV 644
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTD GRTVDFRNTVI
Sbjct: 645 GYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVI 704
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSNLG+ +L G+ + RD+VL ++HFRPE LNRLDEIVVF PL+ EQ+R+
Sbjct: 705 ILTSNLGSPLILDGIQKGWPYEXIRDEVLXVXQQHFRPEFLNRLDEIVVFRPLTKEQIRQ 764
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+ + RLAE+ ++L +T+AA D + YDP++GARP++R +++++ T L++ +
Sbjct: 765 IVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLKRVIQRELETPLAQKI 824
Query: 825 VREEIDENSTVYIDASPKGDNLVYRV 850
+ E+ E + +D P G LV+ V
Sbjct: 825 LAGEVKEGDRLQVDVGPAG--LVFTV 848
>gi|350534488|ref|NP_001234143.1| heat shock protein [Solanum lycopersicum]
gi|68989120|dbj|BAE06227.1| heat shock protein [Solanum lycopersicum]
Length = 980
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/884 (50%), Positives = 614/884 (69%), Gaps = 42/884 (4%)
Query: 6 FTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAERV 65
FT +AI + E+A H HL ALL +G+ + + AG +N R+
Sbjct: 89 FTEMAWQAIVASPEIAKENKHQIVETEHLMKALLEQKNGLARRIFSKAGVDNT-----RL 143
Query: 66 FNQAMKKLPSQTPAPDEIPASTT---LIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ 122
K + Q E S L +++RA+ +K +GD+ ++V+ L+LG ++D +
Sbjct: 144 LEATDKFIRQQPKVIGETAGSMLGRELEGLMQRAREYKKEYGDSFVSVEHLVLGFIQDKR 203
Query: 123 IG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGKLD 179
G LF + +++ +K+ +E +RG++ + G +++L+ YG+DL + +AGKLD
Sbjct: 204 FGKQLFNDFQISLKTLKTAIESIRGRQNVIDQDPEG--KYESLEKYGKDLTAMARAGKLD 261
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L + RLI
Sbjct: 262 PVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALMNRRLI 321
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LDMGAL+AGAKYRGEFE+RLKAVLKEV E+EG++ILFIDEIH V+GAG T G+MDA NL
Sbjct: 322 SLDMGALIAGAKYRGEFEDRLKAVLKEVTESEGQIILFIDEIHTVVGAGATNGAMDAGNL 381
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +P+V DTVSILRGL+E+YE
Sbjct: 382 LKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTVSILRGLRERYE 441
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDEA A +++++ S+P +D + R
Sbjct: 442 LHHGVRISDTALVDAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEINRA 501
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
++LE+E +L + DKASK RL + EL L+++ L +++ EK + ++ +K++
Sbjct: 502 VLKLEMERLSLTNDTDKASKDRLNRLETELSLLKERQAELTEQWEHEKSVMTRLQSIKEE 561
Query: 480 REELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGPD 535
+ + +Q+AER YDL RAA+L+YG++ +++EA+ +L ML E V +
Sbjct: 562 IDRVNLEIQQAEREYDLNRAAELKYGSLNTLQRQLEASEKELSDYMKSGKSMLREEVTGN 621
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+AE+VS+WTGIPV++L Q+E+ +R++G AV AVAE++ RSRAGL P
Sbjct: 622 DVAEIVSKWTGIPVSKLQQSEREKLLHLEEELHKRVVGQDPAVRAVAEAIQRSRAGLSDP 681
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P SF+F+GPTGVGKTELAKALA LF+ E LVRIDMSEYME+H+VSRLIGAPPGYV
Sbjct: 682 HRPIASFMFMGPTGVGKTELAKALANYLFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYV 741
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTE VRRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QGRTV F NTVI
Sbjct: 742 GYEEGGQLTEIVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVI 801
Query: 705 IMTSNLGAEHLLSGMMG------KVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
IMTSN+G++++L+ + T Q + +V+ R FRPE +NR+DE +VF PL
Sbjct: 802 IMTSNVGSQYILNTDDNDDDSSKEATYQTIKQRVMDAARAVFRPEFMNRVDEYIVFQPLD 861
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
+Q+ + RLQ++ V RLA+R + + V++AA+ ++ + YDP YGARP++R +++ V
Sbjct: 862 RDQISSIVRLQLERVQQRLADRKMKIQVSEAAIQLLGSLGYDPNYGARPVKRVIQQNVEN 921
Query: 819 ELSRMLVREEIDENSTVYID----ASPKG----DNLVYRVQKNG 854
EL++ ++R E + T+ +D A G LV++ Q++G
Sbjct: 922 ELAKGILRGEFKDEDTILVDTEVSAFSNGQLPQQKLVFKRQESG 965
>gi|189485561|ref|YP_001956502.1| chaperone ClpB [uncultured Termite group 1 bacterium phylotype
Rs-D17]
gi|170287520|dbj|BAG14041.1| chaperone ClpB [uncultured Termite group 1 bacterium phylotype
Rs-D17]
Length = 869
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/880 (49%), Positives = 603/880 (68%), Gaps = 47/880 (5%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EA+A A +A+ G+ + T HL AL+ +G + I + +
Sbjct: 1 MNLSKFTIKSQEALAEAQNIASEYGNQEITSEHLLYALVKQQNGTVGEIIKKSA---TPE 57
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA-----STTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
++ K L S+ ++ S L K++ ++ K D ++ + + +
Sbjct: 58 QQNMLYANISKDLLSEIEKKPKVSGGNLFLSQGLNKILNNSEKTAKNLKDEFISTEHIFI 117
Query: 116 GLLED--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE 173
+ E+ + K+ G+ + + +RG + ++ + + +QAL+ YG+DL +
Sbjct: 118 AVSEEISENASKILKKHGLTKDIILKILVSIRGDQ--RITDQNPEDKYQALEKYGKDLTD 175
Query: 174 QA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPS 231
A GKLDPVIGRDEEIRR V++LSRRTKNNPV+IGEPGVGKTA+VEGLAQRI+ GD+P
Sbjct: 176 LAKRGKLDPVIGRDEEIRRCVQVLSRRTKNNPVIIGEPGVGKTAIVEGLAQRIISGDIPE 235
Query: 232 NLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTE 291
NL D +++ALD+GAL+AGAKYRGEFE+RLKAVLKE++ A+G++ILFIDE+H ++GAG E
Sbjct: 236 NLKDKKVMALDLGALIAGAKYRGEFEDRLKAVLKEIQSAQGRIILFIDELHTIVGAGSAE 295
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
G++DAAN+ KPMLARG+L+ +GATTL+EYRKY+EKDAA ERRFQ V+ EPSV DT++IL
Sbjct: 296 GTVDAANMLKPMLARGELKLVGATTLDEYRKYIEKDAALERRFQPVFAGEPSVEDTIAIL 355
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RG+KEKYE HHGV+I+D ALV AA LSARYI R+LPDKAIDLVDE+ + +R+++DS P
Sbjct: 356 RGIKEKYEVHHGVKIKDSALVAAATLSARYIMDRYLPDKAIDLVDESASKLRIEIDSMPA 415
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
E+D++E + Q+E+E A++KE D ASK RL + KE+D L+ + ++++KEK I
Sbjct: 416 ELDSVEHRLRQIEVERQAVKKETDAASKERLANMEKEIDKLKRDSAEMKVQWEKEKSSIS 475
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN------ 525
EIRRLK + E + Q+AER DL A++RYG I + + QLE +EN
Sbjct: 476 EIRRLKAEIENMKIEEQKAERNGDLNAVAEIRYGKIPQAQK---QLE----EENKKLLKQ 528
Query: 526 ----LMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAV 570
ML E V + IA VVS+WTGIPVTR+ ++E ++L IG EA++A+
Sbjct: 529 QKEKKMLKEEVDEEDIAVVVSKWTGIPVTRMMESEMQKLLKMEDKLHGRVIGQDEAISAI 588
Query: 571 AESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQ 630
A +V RSR+GL P +P GSFLFLGPTGVGKTELAKALAE LFDDE +VRIDMSEYME+
Sbjct: 589 ANAVRRSRSGLSDPNRPIGSFLFLGPTGVGKTELAKALAELLFDDEKNIVRIDMSEYMEK 648
Query: 631 HSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLT 690
HSVSR IGAPPGYVG EEGGQLTEAVRRRPY +VLFDEVEKA+ VFN +LQ+ DDGRLT
Sbjct: 649 HSVSRFIGAPPGYVGFEEGGQLTEAVRRRPYCIVLFDEVEKANREVFNVMLQLFDDGRLT 708
Query: 691 DGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDE 750
DG+G+TVDF+NTVIIMTSN+G++H+ +++V+QE+R +FRPE LNR+DE
Sbjct: 709 DGRGKTVDFKNTVIIMTSNIGSQHIQESE----NYDEMKNKVMQELRNYFRPEFLNRIDE 764
Query: 751 IVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRR 810
I++F L +L K+ +Q+K R A + + + +TD A D + ++ YDP +GARP++R
Sbjct: 765 IIIFRNLGEMELNKIIEIQIKSFESRFAAKNIHVKLTDKAKDFISSKGYDPAFGARPLKR 824
Query: 811 WLEKKVVTELSRMLVREEIDENSTVYIDASPK-GDNLVYR 849
++ ++ LS L+ E E +++ A+ K GD L ++
Sbjct: 825 AIQTYLLNPLSSKLISGEFKEGDNIFVSAAEKAGDRLEFK 864
>gi|319781348|ref|YP_004140824.1| ATP-dependent chaperone ClpB [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167236|gb|ADV10774.1| ATP-dependent chaperone ClpB [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|406816996|gb|AFS60096.1| ATP-dependent chaperone ClpB [Mesorhizobium ciceri]
Length = 868
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/864 (51%), Positives = 599/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ + I A +A S H QFTP H+ L+ D G+ A I AGG +
Sbjct: 1 MNLEKYSERVRGFIQSAQTMALSRNHQQFTPEHILKVLVDDDEGLAASLIERAGGN--VR 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
+ A++ +P ++ + L KV A+ K GD+ + V++L+ L +
Sbjct: 59 DVKLGVETALEAMPKVEGGNGQLYLAQPLAKVFSTAEELAKKAGDSFVTVERLLQALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ D+ +AGV + + +R +GR +SAS + + ALK Y RDL +AG
Sbjct: 119 KSAKTADILAKAGVTAQALNQVINDVR--KGRTADSASAEQGYDALKKYARDLTADARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV A G +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVTSASGNIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V EP+V DTVSILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVDEPTVEDTVSILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYI R LPDKAIDLVDEA + +R+Q+DS+PE +D +
Sbjct: 357 KYEQHHKVRISDSALVAAATLSNRYIADRFLPDKAIDLVDEAASRLRMQVDSKPEALDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL L ++ + +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDDASKDRLARLEKELVGLEEESTEITAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ +E L A+R+ + RA +L YG I E+E + + E Q + M+ E V PD
Sbjct: 477 KKQLDEARNDLAIAQRKGEFQRAGELAYGKIPELEKKLKEAEA-QDGKAGMVEEVVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A +VSRWTGIPV ++ Q E+++L +G EAV AV+++V R+RAGL P
Sbjct: 536 VAHIVSRWTGIPVDKMLQGERDKLLRMEDEIGKRVVGQGEAVQAVSKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDDE+ +VRIDMSE+ME+HSV+RLIGAPPGYVG
Sbjct: 596 RPIGSFMFLGPTGVGKTELTKALASFLFDDESAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 656 YEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + + + RD+V+ VR FRPE LNR+DE+++F L + + ++
Sbjct: 716 MTSNLGAEYLVN-LTEDQDVDLVRDEVMNVVRASFRPEFLNRVDEVILFHRLRRQDMGRI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+K + L +R + L++ A+D + A+ YDP YGARP++R ++K++ L+ ++
Sbjct: 775 VEIQLKRLESLLVDRKITLSLDQEAVDWLAAKGYDPAYGARPLKRVMQKELQDPLAEKIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + STV + A D L +R
Sbjct: 835 LGDILDGSTVKVTAG--SDRLNFR 856
>gi|357022496|ref|ZP_09084722.1| ATPase [Mycobacterium thermoresistibile ATCC 19527]
gi|356477694|gb|EHI10836.1| ATPase [Mycobacterium thermoresistibile ATCC 19527]
Length = 848
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/841 (53%), Positives = 589/841 (70%), Gaps = 37/841 (4%)
Query: 25 GHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAE--RVFNQAMKKLPSQTPAPDE 82
GH Q P HL +ALL+ GI A + G E A AE RV +Q P + +
Sbjct: 25 GHPQIQPAHLLMALLTQHDGIAAPLLEAVGVEPATIRAEVQRVLDQQ----PKISGGASQ 80
Query: 83 IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE-DSQIGDLFKEAGVAVARVKSEV 141
S + I AQ D +++ + L++GL DS + + G ++
Sbjct: 81 PQLSRDSLNAITTAQQLATEMADEYVSTEHLLVGLASGDSDVAKILNGHGATPQALREAF 140
Query: 142 EKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRT 199
K+RG +V + + T+QAL+ Y DL +A GKLDPVIGRD EIRRV+++LSRRT
Sbjct: 141 AKVRGSA--RVTTPDPEGTYQALEKYSTDLTARAREGKLDPVIGRDNEIRRVIQVLSRRT 198
Query: 200 KNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEER 259
KNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D +IALD+G++VAG+KYRGEFEER
Sbjct: 199 KNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVIALDLGSMVAGSKYRGEFEER 258
Query: 260 LKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFKPMLARGQLRCIGATTLE 318
LKAVL E++ + G++I FIDE+H ++GAG T +GSMDA N+ KPMLARG+LR +GATTL+
Sbjct: 259 LKAVLDEIKNSAGQIITFIDELHTIVGAGATGDGSMDAGNMIKPMLARGELRLVGATTLD 318
Query: 319 EYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLS 378
EYRKY+EKDAA ERRFQQVYV EPSV DT+ ILRGLKE+YE HHGVRI D ALV AA LS
Sbjct: 319 EYRKYIEKDAALERRFQQVYVGEPSVEDTIGILRGLKERYEVHHGVRITDSALVAAATLS 378
Query: 379 ARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKAS 438
RYIT R LPDKAIDLVDEA + +R+++DS+P EID +ER +LEIE AL KE+D+AS
Sbjct: 379 NRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLVRRLEIEEMALSKEEDEAS 438
Query: 439 KARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREELLFALQEAERRYDLAR 498
K RL ++R EL D ++KL L R++ EK+ I+ +R LK++ E L + AER + R
Sbjct: 439 KERLEKLRAELADHKEKLAELTARWQNEKKAIETVRELKEQLEALKIEAERAERDGNYER 498
Query: 499 AADLRYGAIQEVEAAI-GQLEGNQSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEK 557
A+LRYG I EVE + ++ EN+ML E VGPD IAEVVS WTGIP R+ + E+
Sbjct: 499 VAELRYGRIPEVEKKLEAATPHAEARENVMLKEEVGPDDIAEVVSAWTGIPAGRMLEGEQ 558
Query: 558 -----------ERLIGLAEAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAK 606
+R++G AV AV+++V RSRAG+ P +PTGSF+FLGPTGVGKTELAK
Sbjct: 559 AKLLRMEDELAKRVVGQKRAVQAVSDAVRRSRAGVADPNRPTGSFMFLGPTGVGKTELAK 618
Query: 607 ALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLF 666
ALAE LFDDE +VRIDMSEY E+HSV+RL+GAPPGYVG+++GGQLTEAVRRRPY+V+LF
Sbjct: 619 ALAEFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQLTEAVRRRPYTVILF 678
Query: 667 DEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQ 726
DE+EKAH VF+ LLQVLDDGRLTDGQGRTVDFRNT++I+TSNLGA
Sbjct: 679 DEIEKAHQDVFDILLQVLDDGRLTDGQGRTVDFRNTILILTSNLGAGG------------ 726
Query: 727 VARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAV 786
+ +QV+ VR HF+PE +NRLD+I++FD L+ E+L + +Q+ +A RL +R + L V
Sbjct: 727 -SEEQVMAAVRAHFKPEFINRLDDIIIFDGLNPEELVSIVDIQLAQLAKRLEQRRLTLQV 785
Query: 787 TDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYIDASPKGDNL 846
++ A + +DP YGARP+RR ++K + +L+++L+ E+ + V ++ +P G++L
Sbjct: 786 SEPAKQWLAQRGFDPQYGARPLRRLIQKVIGDQLAKLLLAGEVHDGDVVPVNVAPDGNSL 845
Query: 847 V 847
V
Sbjct: 846 V 846
>gi|294101185|ref|YP_003553043.1| ATP-dependent chaperone ClpB [Aminobacterium colombiense DSM 12261]
gi|293616165|gb|ADE56319.1| ATP-dependent chaperone ClpB [Aminobacterium colombiense DSM 12261]
Length = 874
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/865 (51%), Positives = 612/865 (70%), Gaps = 25/865 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ KFT K+ EA++ A ++A G + HL +ALL G+ + + N +
Sbjct: 1 MDISKFTKKSQEALSSAQDMALRWGQQEVDGEHLLLALLEQSEGLIPRILQKMNVPVDAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ER + ++ P +I S + +++ +AQ + D +++V+ + L
Sbjct: 61 KKDVERELEK-RPRVSGPGLEPGKIYISRRVSQILVQAQERAERLKDEYVSVEHIFSCFL 119
Query: 119 ED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
E+ + G + + + + +RG + +V S + + T++AL YGRDLV+ A
Sbjct: 120 EEGSATAAGRIIAGYNITIESFLETLTAVRGSQ--RVSSENPEETYEALDKYGRDLVKMA 177
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRDEE+RRV+RILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP L
Sbjct: 178 RLGKLDPVIGRDEEVRRVIRILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGL 237
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + ALDMG+LVAGAKYRGEFEERLKAVL E++ +EG++ILFIDE+H ++GAG EG+
Sbjct: 238 KDRSIFALDMGSLVAGAKYRGEFEERLKAVLNEIKTSEGRIILFIDELHTIVGAGAAEGA 297
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
+DA N+ KPMLARG+L CIGATT++EYRK +EKDAA RRFQ V V +P V DT+SILRG
Sbjct: 298 IDAGNMLKPMLARGELHCIGATTIDEYRKRIEKDAALARRFQPVLVEQPDVEDTISILRG 357
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+ E HHGVRI+D ALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E+
Sbjct: 358 LKERLEVHHGVRIRDNALVGAAVLSNRYITDRFLPDKAIDLVDEACAMIRTEIDSLPAEL 417
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D RK MQLEIE AL+KEKD AS RL ++KEL + R++ L +Y+ EKE I ++
Sbjct: 418 DAASRKVMQLEIEEAALKKEKDAASLERLSVLQKELQEAREEADALRAQYESEKEVISKV 477
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS---DENLMLTE 530
R+++++ + + +++AER YDL +AA+L++G + E++ + + EG + + + +L E
Sbjct: 478 RKMREEIDAVKREIEKAEREYDLNKAAELKHGRLPELQQQLKKEEGAHAAGQEGDQLLRE 537
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRA 579
V D+IAE+VSRWTGIPVTRL + E+E R+IG EAV VA++V+R+R+
Sbjct: 538 EVTEDEIAEIVSRWTGIPVTRLMEGEREKLLKLDEILHQRVIGQDEAVELVADAVIRARS 597
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAK LAE LFD E+ ++RIDMSEYME+ SVSRLIGA
Sbjct: 598 GIKDPRRPVGSFIFLGPTGVGKTELAKTLAEALFDSEDNMIRIDMSEYMEKFSVSRLIGA 657
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LDDGR+TD QG VDF
Sbjct: 658 PPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHHDVFNVLLQILDDGRVTDSQGHVVDF 717
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+GA LL G+ G ++ AR+ V++E+R+ FRPE LNR+D++V+F PL
Sbjct: 718 KNTVIIMTSNIGAPLLLEGITGDGQIKEDAREAVMKELRQAFRPEFLNRVDDVVLFKPLQ 777
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++R++ +L +++ RL + + L +++ A+D + YDP++GARP++R++ K++ T
Sbjct: 778 RHEIRQIVKLLAQELQKRLKDHRIDLELSEEAVDYIADAGYDPVFGARPLKRFIVKQLET 837
Query: 819 ELSRMLVREEIDENSTVYIDASPKG 843
++R LV E+ E S VY+ K
Sbjct: 838 RMARSLVAGEVREGSKVYVTVKDKA 862
>gi|395784957|ref|ZP_10464691.1| chaperone ClpB [Bartonella tamiae Th239]
gi|423718135|ref|ZP_17692325.1| chaperone ClpB [Bartonella tamiae Th307]
gi|395425469|gb|EJF91630.1| chaperone ClpB [Bartonella tamiae Th239]
gi|395426568|gb|EJF92695.1| chaperone ClpB [Bartonella tamiae Th307]
Length = 867
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/852 (52%), Positives = 598/852 (70%), Gaps = 21/852 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + + A A SA + QF P HL LL D G+ A + AGG+ +
Sbjct: 1 MNLEKYTERVQGFLQSAQNYALSADNQQFLPEHLLKVLLDDNDGLCASLLEKAGGD--LK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
+ + N+A+ LP + ++ S L KV +A+ + GD+ + V++L+ LL
Sbjct: 59 AVKTSLNEALSALPKVSGGNGQLYMSQPLAKVFTKAEELAEKSGDSFVTVERLLQALLME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ ++ D+ E GVA + + +R +GR +SA+ + + ALK Y RDL + A G
Sbjct: 119 KSAKTSDILSENGVASTDLNKVINDMR--KGRTADSANAEAQYDALKKYARDLTQDAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA++EGLA RIV GDVP L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIIEGLALRIVNGDVPETLRDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
L+ALDMGAL+AGAKYRGEFEERLKA+L EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 ALLALDMGALIAGAKYRGEFEERLKAILTEVQSANGEIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EPSV DT+SILRG+KE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPSVEDTISILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL+ E D ASK RL ++ EL +L ++ + +++ EK+++ L
Sbjct: 417 DRRILQLKIEREALKVETDTASKDRLGKLENELVELEEESNEITAKWQAEKQKLGHAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ ++ AL A+R+ + RA +L Y I ++E + + E +Q ++ M+ ETV PD
Sbjct: 477 KKQLDDARNALAVAQRQGEFQRAGELSYSIIPDLEKQLDEAE-SQENQGSMVEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E+L IG EAV AV+ +V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVIGQGEAVQAVSRAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF DE +VR+DMSEYME+HSV+RLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDETAMVRLDMSEYMEKHSVARLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 656 YEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLG+E L+ + AR+ V+ V+ FRPE LNR+DEI++F L +++ +
Sbjct: 716 MTSNLGSE-FLTALGDGDDADKAREDVMAVVKAAFRPEFLNRVDEIILFHRLHRKEMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+K + L +R + L + D A + + + YDP YGARP++R ++K+V L+ L+
Sbjct: 775 VEVQLKRLQNLLTDRKIHLLIEDDAREFLADKGYDPAYGARPLKRVIQKEVQDPLAERLL 834
Query: 826 REEIDENSTVYI 837
+I + STV I
Sbjct: 835 LGDIFDGSTVKI 846
>gi|171913581|ref|ZP_02929051.1| ATP-dependent chaperone protein ClpB [Verrucomicrobium spinosum DSM
4136]
Length = 858
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/839 (52%), Positives = 594/839 (70%), Gaps = 27/839 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MNP++ T K EA+A + LAT GHA+ P H+ + LL GI ++ G AA
Sbjct: 1 MNPERITVKLQEALASSQSLATRYGHAEVKPSHMLLTLLEQDGGITKPLVDKVGANAAAL 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
QSA F + K P + S L + + A+ QK D +L+V+ +L L +
Sbjct: 61 QSAVEAF---LAKQPRISGGGGADRLSGDLRETLANAEKEQKTLKDEYLSVEHFLLALFK 117
Query: 120 D-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ I + K+AG+ + + +RG ++V + +Q L+ YG DL +A G
Sbjct: 118 TRTDIEGVLKQAGLKYETLLQALTSVRG--AQRVTDQDPEGKYQTLEKYGTDLTARARQG 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DPVIGRD+EIRRV+++LSRR+KNNPVLIGEPGVGKTA+VEGLA+RIV GDVP +L +
Sbjct: 176 KIDPVIGRDDEIRRVMQVLSRRSKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPDSLKNK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
R+I++D+G ++AGAKYRGEFEERLKA LKEV +EG++ILFIDE+H ++GAG +EG++DA
Sbjct: 236 RVISMDLGGMLAGAKYRGEFEERLKAFLKEVTSSEGEIILFIDELHTIVGAGASEGAVDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+LRC+GATTL+EYRKY+EKDAA ERRFQ VYV EPSV DT++ILRGLKE
Sbjct: 296 SNLLKPQLARGELRCVGATTLDEYRKYIEKDAALERRFQPVYVGEPSVEDTIAILRGLKE 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRIQD A+V AA LS RYI+ R LPDKA+DLVDEA + ++++LDS P EID +
Sbjct: 356 RYEVHHGVRIQDSAIVAAATLSHRYISDRFLPDKAVDLVDEAASRLKIELDSMPTEIDVI 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER MQ E+E AL+KE D AS+ARL ++ KE+ DL++K L ++++KEKE + R++
Sbjct: 416 ERDVMQREMERQALKKETDPASRARLEKLEKEIADLKEKGSGLKLQWQKEKEVVQASRKV 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI---GQLEGNQSDENLMLTETVG 533
K++ + L ++A+RR D ARA +++YG I ++E + Q + + +L E V
Sbjct: 476 KEEIDRLRTEQEQAQRRGDFARAGEIQYGLIPDLEKKLQEATQAHAQGTAKGQLLREEVT 535
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
D IA+VV+ WTGIPV+RL + E+ R+IG A+ AV+ +V R+RAGL
Sbjct: 536 EDDIAKVVATWTGIPVSRLQEGERSKLTHMEDRLANRVIGQKNAIKAVSNAVRRARAGLQ 595
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
+P GSFLFLGPTGVGKTEL+KALAE LFDDEN + RIDMSEYME+HSV+RLIGAPPG
Sbjct: 596 DENRPIGSFLFLGPTGVGKTELSKALAEFLFDDENAMTRIDMSEYMEKHSVARLIGAPPG 655
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRRRPYSVVLFDEVEKAH VFN+LLQVLDDGR+TDGQGRTVDFRNT
Sbjct: 656 YVGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPDVFNSLLQVLDDGRITDGQGRTVDFRNT 715
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
VIIMTSN+G+ + + + RD +R+ FRPE LNR+DE+++FD L L
Sbjct: 716 VIIMTSNIGSHAIQEEANPEQREALVRDA----LRQFFRPEFLNRIDEVIIFDRLDARDL 771
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++Q++ V RLA++ + L +TD A+ + E YDP++GARP++R +++ V+ LS
Sbjct: 772 SAIVKVQLQRVVSRLAKQNIGLVLTDEAVRKIADEGYDPVFGARPLKRAIQRLVLDPLS 830
>gi|335036129|ref|ZP_08529459.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium sp.
ATCC 31749]
gi|333792693|gb|EGL64060.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium sp.
ATCC 31749]
Length = 874
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/877 (50%), Positives = 596/877 (67%), Gaps = 23/877 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK++ + + A A + H QF+P H+ LL D G+ A I AGG+ A+
Sbjct: 1 MNIDKYSERVRGFLQSAQTFALAENHQQFSPEHVLKVLLDDEQGMAASLIERAGGD--AK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A + A+ KLP + + + L KV A+ K GD+ + V++L+ L +
Sbjct: 59 EARLANDAALAKLPKVSGGNGGLSLTAPLAKVFSTAEDLAKKAGDSFVTVERLLQALAIE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ K+AG + + +R +GR +SA+ + F ALK Y RDL E+A G
Sbjct: 119 SSASTSASLKKAGATAQALNQVINDIR--KGRTADSANAEQGFDALKKYARDLTEEAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
+LDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 RLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EVE G +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 KLMALDMGALIAGAKYRGEFEERLKAVLNEVEAENGGIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVLVDEPNVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+D L
Sbjct: 357 KYEQHHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL++E D++S RL ++ EL D +K L R++ EK+++ L
Sbjct: 417 DRRIIQLKIEREALKQETDQSSVDRLKKLEDELADTEEKADALTARWQAEKQKLGHAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG-NQSDENLMLTETVGPD 535
K++ +E L A+R RA +L YG I +E + E + S M+ E V PD
Sbjct: 477 KKRLDEARNELAIAQRNGQFQRAGELTYGIIPGLEKELAAAEARDSSGAGSMVQEVVTPD 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA VVSRWTGIPV ++ + ++E+L +G EAV AV+++V RSRAGL P
Sbjct: 537 NIAHVVSRWTGIPVDKMLEGQREKLLRMEDELAKSVVGQGEAVQAVSKAVRRSRAGLQDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL K+LA LFDDE +VR+DMSEYME+HSV+RLIGAPPGYV
Sbjct: 597 NRPIGSFIFLGPTGVGKTELTKSLARFLFDDETAMVRLDMSEYMEKHSVARLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+I
Sbjct: 657 GYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTII 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E ++ M + R+ V++ VR HFRPE LNR+D+I++F L +++
Sbjct: 717 IMTSNLGSE-FMTQMGDNDDVDSVRELVMERVRSHFRPEFLNRIDDIILFHRLRRDEMGA 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+K + LA+R + L + + A + + + YDP YGARP++R ++K V L+ M+
Sbjct: 776 IVEIQLKRLVSLLADRKITLELDEDARNWLANKGYDPAYGARPLKRVIQKSVQDRLAEMI 835
Query: 825 VREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAAT 861
+ EI + S V + + D L+++V+ G + T
Sbjct: 836 LGGEIPDGSRVKVTSGT--DRLLFKVKPAKGEAETET 870
>gi|229828719|ref|ZP_04454788.1| hypothetical protein GCWU000342_00785 [Shuttleworthia satelles DSM
14600]
gi|229793313|gb|EEP29427.1| hypothetical protein GCWU000342_00785 [Shuttleworthia satelles DSM
14600]
Length = 861
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/866 (50%), Positives = 614/866 (70%), Gaps = 30/866 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNA--GGENA 58
MN KFT K+ EA+ +LA G+ HL VALL G+ + + G++
Sbjct: 1 MNIQKFTQKSIEAVQNTEKLAADYGNQTIDDEHLLVALLQQEDGLIPKLLEKMEINGQHF 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
++A N LP + A S L + A+ KA GD +++V+ L L ++
Sbjct: 61 TENALSKLN----ALPKVSGAGQRY-FSQALNDALNHAEDEAKAMGDEYVSVEHLFLSMM 115
Query: 119 EDSQIG--DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ G L E G+ R + + ++RG +V S + + T++AL YG ++V +A
Sbjct: 116 RFASRGMKALMSEYGLTRERFLTALSQVRG--NVRVTSDNPEDTYEALDKYGHEMVARAK 173
Query: 177 --KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K DP+IGRDEEIR V+RILSR++KNNPVLIG+PGVGKTAVVEGLAQRI RGDVP L
Sbjct: 174 EQKADPIIGRDEEIRNVIRILSRKSKNNPVLIGDPGVGKTAVVEGLAQRIARGDVPDTLK 233
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D ++ ALDMGALVAGAKYRGEFEERLKAVL V+++EG++++FIDE+H ++GAG+T+G++
Sbjct: 234 DKKIFALDMGALVAGAKYRGEFEERLKAVLDSVKKSEGQILMFIDELHTIVGAGKTDGAL 293
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKD A RRFQ V V EP+V DT+SILRGL
Sbjct: 294 DAGNMLKPMLARGELHCIGATTLDEYREYIEKDQALARRFQPVMVDEPTVEDTISILRGL 353
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
K++YE H V+IQD ALV AA LS RYIT R LPDKAIDLVDEACA++R ++DS PE++D
Sbjct: 354 KDRYEVFHHVKIQDAALVSAATLSNRYITDRFLPDKAIDLVDEACASIRTEMDSMPEDLD 413
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQ++IE AL+KE D SK RL ++ +EL DL+++L +++ EK +D++
Sbjct: 414 EINRKVMQMQIEEEALKKETDSLSKERLEKLTRELADLKEELNSRKAQWENEKNALDKVS 473
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL-MLTETVG 533
L+++ EE ++ A+ YDL++AA+L+YG + +++ ++ E N +++ M+ E V
Sbjct: 474 ALREEIEETKKEIERAKTSYDLSKAAELQYGKLPKLQESLKAEEANIEGKDMGMVHEAVT 533
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
D+IA +VSRWTGIPV +LG++E+ +R++G +AV V E+++RSRAG+
Sbjct: 534 EDEIARIVSRWTGIPVAKLGESERNKTLHLDEELHKRVVGQDQAVQLVTEAIIRSRAGIK 593
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAK LA LFDDE +VR+DMSEYME++SVSRLIGAPPG
Sbjct: 594 DPSRPIGSFLFLGPTGVGKTELAKTLAASLFDDEKNIVRLDMSEYMEKYSVSRLIGAPPG 653
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT
Sbjct: 654 YVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNT 713
Query: 703 VIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
+IIMTSNLG+++LL G+ G++ + A + V+ +V+ HFRPE +NRLDEI++F PL+
Sbjct: 714 IIIMTSNLGSDYLLDGIDEHGEIGPK-AEEMVMNQVKTHFRPEFINRLDEIIMFKPLTKS 772
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ ++ LQ+ ++ R+ +R + + +TD A D ++ Y+P YGARP++R+++K V T +
Sbjct: 773 NIGRIVDLQLAELNARMDDRQIKVVLTDQARDFIIDHGYEPAYGARPLKRYIQKTVETLV 832
Query: 821 SRMLVREEIDENSTVYIDASPKGDNL 846
+R++++ +ID ++ I S K D L
Sbjct: 833 ARIILQGQIDMGDSIKI--SVKDDQL 856
>gi|225017694|ref|ZP_03706886.1| hypothetical protein CLOSTMETH_01623 [Clostridium methylpentosum
DSM 5476]
gi|224949487|gb|EEG30696.1| hypothetical protein CLOSTMETH_01623 [Clostridium methylpentosum
DSM 5476]
Length = 867
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/852 (51%), Positives = 608/852 (71%), Gaps = 28/852 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EAI + EL+ + Q HL AL++ G+ Q + G
Sbjct: 1 MNAQKFTQKSLEAIQNSQELSLEHQNMQIEAEHLLYALITQEQGLIPQLLLKMGVNLEGF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
AE +A+ P + E I S + + + A+ D +++V+ + L L
Sbjct: 61 EAE--VKRAVDSFPHVSGPGREAGKIYVSGEMDRTLIEAEKIAANMKDDYVSVEHIFLAL 118
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L+ + +I ++F+ G+ + + +RG +V S S ++T+ AL YG DLVE+A
Sbjct: 119 LQSPNDRIKEIFRTFGITKDKFLKILVSVRG--NTRVTSDSPESTYDALSRYGTDLVERA 176
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRD+EIR V+RILSR++KNNPVLIGEPGVGKTA+ EGLAQRIVRGDVP +L
Sbjct: 177 RSKKLDPVIGRDDEIRNVIRILSRKSKNNPVLIGEPGVGKTAIAEGLAQRIVRGDVPHSL 236
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + +LDMG+L+AGAK+RGEFEERLKAVL E++++EGK+ILFIDE+H ++GAG+TEGS
Sbjct: 237 QDKTIFSLDMGSLIAGAKFRGEFEERLKAVLGEIKKSEGKIILFIDELHTIVGAGKTEGS 296
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L CIGATTL EYR+Y+EKD A ERRFQ V V+EP+V DT++ILRG
Sbjct: 297 MDAGNLLKPMLARGELHCIGATTLNEYRQYIEKDPALERRFQPVLVSEPTVEDTIAILRG 356
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE +HGV+IQD+A++ AA LS RYI+ R LPDKAIDLVDEACA +R ++DS P E+
Sbjct: 357 LKERYEVYHGVKIQDQAIIAAATLSNRYISDRFLPDKAIDLVDEACAMIRTEIDSMPTEL 416
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D ++RK +Q EIE AL+KEKD S+ L E++KEL ++R + + L ++ EK I ++
Sbjct: 417 DVIQRKIIQHEIEEAALKKEKDALSQEHLHEIQKELAEMRGEFKSLKAKWDNEKASIGKV 476
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG---NQSDENLMLTE 530
++L++ E+L +++AE+ YDL +AA+L+YG + ++ + + E + + +N +L +
Sbjct: 477 QKLRENLEQLNAEIEKAEQEYDLNKAAELKYGKLPALQKQLEEAEKTAESSAQKNTLLRD 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V ++IA ++ RWTGIPV+RL + E+E+L IG EAV V E+++RSRA
Sbjct: 537 KVTEEEIARIIERWTGIPVSRLMEGEREKLLHLEDTLHKRVIGQNEAVTKVTEAIMRSRA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P +P GSFLFLGPTGVGKTELAKALAE LFDDE+ +VRIDM+EYME++SVSRLIGA
Sbjct: 597 GIQDPNRPIGSFLFLGPTGVGKTELAKALAECLFDDEHSIVRIDMTEYMEKYSVSRLIGA 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NT+II+TSNLG+ LL G+ G++T + A+ +V + +++ FRPE LNRLDEIV + PL
Sbjct: 717 KNTIIILTSNLGSSSLLEGIGADGEIT-ESAKFEVNELLKRTFRPEFLNRLDEIVFYKPL 775
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
S + + + L + D+ RLA + ++ V++ A ++ YDP+YGARP++R++++ V
Sbjct: 776 SRQDITAIVDLLIADLNRRLAPKQLSCEVSEEAKQFIIDHGYDPVYGARPLKRFVQQAVE 835
Query: 818 TELSRMLVREEI 829
T +++ ++ +I
Sbjct: 836 TLIAKEIIASDI 847
>gi|260437230|ref|ZP_05791046.1| ATP-dependent chaperone protein ClpB [Butyrivibrio crossotus DSM
2876]
gi|292810543|gb|EFF69748.1| ATP-dependent chaperone protein ClpB [Butyrivibrio crossotus DSM
2876]
Length = 863
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/861 (51%), Positives = 614/861 (71%), Gaps = 24/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EA+ +LA +++ HLA AL+ + I + A
Sbjct: 1 MNIQKFTQKSVEAVQECEKLAYEFSNSEIDNEHLAYALVRIEDSLILSLIRKMDIDEKAY 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
A+ + + K P + +I S L KV+ A+ KA GD ++V+ L L L++
Sbjct: 61 IAD--CEKIVDKKP-KVSGDVQIRISQALNKVLLCAEDEAKAMGDNFVSVEHLFLTLIKY 117
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGK- 177
++++ LF + + RV ++ +RG + V + + + T++ L+ YG DLVE+A K
Sbjct: 118 PNNEVARLFAKYNITRERVLQVLQSIRGD--KSVTTDNPEATYETLEKYGVDLVEKAKKQ 175
Query: 178 -LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
+DPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 176 EMDPVIGRDNEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPDGLKDK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMGALVAGAKYRGEFEERLK+VL EV++++G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 236 TVFSLDMGALVAGAKYRGEFEERLKSVLDEVKKSDGQIILFIDELHTIVGAGKTDGAMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYR Y+EKD A ERRFQ V V EP+V DT+SILRG+KE
Sbjct: 296 GNMLKPMLARGELHCIGATTLDEYRMYIEKDPALERRFQPVTVDEPTVEDTISILRGIKE 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D L
Sbjct: 356 RYEVYHGVKIADNALVAAAVLSHRYISDRFLPDKAIDLVDEACALIKTELDSMPAELDEL 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK MQLEIE AL+KE D+ SK RL+E+++EL + ++KL +++ EK +D++ ++
Sbjct: 416 SRKVMQLEIEEAALKKETDEISKKRLLELQEELAEDKEKLDAGKAKWESEKSSVDKLSKI 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+++ E + +Q+A+R Y+L +AA+L+YG + ++ + + E + L L E V D
Sbjct: 476 REEIESVNGQIQQAQREYNLEKAAELQYGKLPALQKQLAEEEKIVKERELTLVHECVTED 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+I ++VS+WTGIPVTRL ++E+ +R++G EAV V E+++RS+AG+ P
Sbjct: 536 EIGKIVSKWTGIPVTRLNESERNKTLNLGNELHKRVVGQDEAVRKVTEAIMRSKAGIKDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAK LA LFDDEN +VRIDMSEYME++SVSRLIGAPPGYV
Sbjct: 596 GKPIGSFLFLGPTGVGKTELAKTLAASLFDDENNIVRIDMSEYMEKYSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD +GRTVDF+NT+I
Sbjct: 656 GYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRVTDSKGRTVDFKNTII 715
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
I+TSNLG+++LL G+ G++ + + V+ ++R FRPE LNRLDEI++F PL+ + +
Sbjct: 716 ILTSNLGSQYLLDGIGENGEIKPECEK-LVMNDLRASFRPEFLNRLDEIIMFKPLTKDNI 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L MK++ RL ++ + + ++D+A ++A YDP+YGARP++R+L+K V T ++
Sbjct: 775 GNIINLLMKELNARLEDKEITVKLSDSAKAGIIAGGYDPVYGARPLKRYLQKTVETLCAK 834
Query: 823 MLVREEIDENSTVYIDASPKG 843
+++ + T+ ID + G
Sbjct: 835 LILANSVAPGDTILIDDTGNG 855
>gi|381204181|ref|ZP_09911252.1| ATPase [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 866
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/855 (50%), Positives = 607/855 (70%), Gaps = 22/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT K+ A+ ++ A + Q +HL AL+ +G+ Q + E
Sbjct: 1 MDSRKFTEKSLLALEVSQNEAIRRQNPQIISIHLLYALVVQENGLIPQLLEKM--EIVLT 58
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ + + LP+ + P+ ++ S L V+ A+ K GD+ ++V+ L+L L++
Sbjct: 59 TFQMQLAHQLDTLPTLSGPSSTQVSGSGELNHVLVNAEEKSKQIGDSFISVEHLLLSLVD 118
Query: 120 DSQIGD---LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ + G G+ RV +E++RG + +V S + + +QAL+ YG++L + A
Sbjct: 119 EGKRGSAGRFLAGCGITKERVCKTLEEVRGHQ--RVNSQNPEENYQALEKYGQELTKHAL 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD+EIRRV ++LSRRTKNNPVLIGEPGVGKTA+ EGLAQRIVR DVP +L
Sbjct: 177 EGKLDPVIGRDDEIRRVTQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVRNDVPDSLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D R+I+LD+GAL+AGAKYRGEFEERLKAVL+E++++ G++ILFIDE+H V+GAG+TEG+M
Sbjct: 237 DKRIISLDLGALIAGAKYRGEFEERLKAVLQEMQKSHGEIILFIDELHTVVGAGKTEGAM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATTL+EYRK++EKD A ERRFQQV + +PSV DT+SILRGL
Sbjct: 297 DAGNLLKPMLARGELHCIGATTLDEYRKHIEKDPALERRFQQVLIDQPSVEDTISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGVRI+D AL+ A+ LS RYI R LPDKAIDL+DEA A +RV+++S P E+D
Sbjct: 357 KERYEIHHGVRIKDNALIAASTLSNRYIADRFLPDKAIDLMDEAAAKLRVEINSMPAEMD 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ +QLEIE AL+KEKD AS RL + +EL DL++K+ L +++ KEK+ + +
Sbjct: 417 EISRRILQLEIEKAALKKEKDSASIHRLEVLTRELADLQNKMDTLTLQWSKEKKSLQSLS 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG-NQSDENLMLTETVG 533
LK++ EE A+++A+R Y+L AA L YG ++++ + Q + + +N +L E V
Sbjct: 477 DLKKQLEETRLAIEKAKRNYNLEEAAKLEYGVLRDLANQLRQAQMVAEQHQNQLLREVVS 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
+ IAE+V+RWTGIPV+R+ ++E E+L +G +A+ V+++VLR+R+G+
Sbjct: 537 SEDIAEIVARWTGIPVSRMLESENEKLLLLPEHLRQRVVGQHQAIETVSDAVLRARSGIN 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P++P GSF+FLGPTGVGKTELA+AL+E LFDDE +VRIDMSEYME+H+V+RLIGAPPG
Sbjct: 597 DPKRPLGSFIFLGPTGVGKTELARALSEFLFDDEQSMVRIDMSEYMEKHAVARLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEA+RRRPYSV+LFDE+EKAH VFN LLQ+L+DGRLTD QGRTVDFRNT
Sbjct: 657 YVGYQEGGQLTEAIRRRPYSVILFDEIEKAHYDVFNILLQILEDGRLTDSQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+I+MTSNLG+ ++ KV Q L E++ HFRPE LNR+D+ +VF PL E L
Sbjct: 717 LILMTSNLGSTRIMEQTRNKVDFQSICQSALAELKGHFRPEFLNRIDDTIVFHPLQQEDL 776
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++ ++Q++ + RL ER + L ++ A+ ++ ++ YGARP++R ++K++ T L+R
Sbjct: 777 LEIVQIQLQRLQKRLDERRIELEMSPDAMKLLSETGFEEFYGARPLKRAMQKELETPLAR 836
Query: 823 MLVREEIDENSTVYI 837
L+ I + + I
Sbjct: 837 ALLSGTIKDGQKLNI 851
>gi|46908440|ref|YP_014829.1| clpB protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47093731|ref|ZP_00231482.1| clpB protein [Listeria monocytogenes str. 4b H7858]
gi|254825230|ref|ZP_05230231.1| clpB protein [Listeria monocytogenes FSL J1-194]
gi|254853331|ref|ZP_05242679.1| clpB protein [Listeria monocytogenes FSL R2-503]
gi|254992122|ref|ZP_05274312.1| clpB protein [Listeria monocytogenes FSL J2-064]
gi|255520176|ref|ZP_05387413.1| clpB protein [Listeria monocytogenes FSL J1-175]
gi|300763984|ref|ZP_07073980.1| hypothetical protein LMHG_10770 [Listeria monocytogenes FSL N1-017]
gi|386732954|ref|YP_006206450.1| clpB protein [Listeria monocytogenes 07PF0776]
gi|404281826|ref|YP_006682724.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404287639|ref|YP_006694225.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|405753441|ref|YP_006676906.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|405756384|ref|YP_006679848.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|406705000|ref|YP_006755354.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes L312]
gi|424715089|ref|YP_007015804.1| Chaperone protein ClpB [Listeria monocytogenes serotype 4b str.
LL195]
gi|54035769|sp|Q71XF9.1|CLPB_LISMF RecName: Full=Chaperone protein ClpB
gi|46881711|gb|AAT05006.1| clpB protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47017888|gb|EAL08670.1| clpB protein [Listeria monocytogenes str. 4b H7858]
gi|258606694|gb|EEW19302.1| clpB protein [Listeria monocytogenes FSL R2-503]
gi|293594476|gb|EFG02237.1| clpB protein [Listeria monocytogenes FSL J1-194]
gi|300515325|gb|EFK42376.1| hypothetical protein LMHG_10770 [Listeria monocytogenes FSL N1-017]
gi|384391712|gb|AFH80782.1| clpB protein [Listeria monocytogenes 07PF0776]
gi|404222641|emb|CBY74004.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|404225584|emb|CBY76946.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|404228461|emb|CBY49866.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404246568|emb|CBY04793.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|406362030|emb|CBY68303.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes L312]
gi|424014273|emb|CCO64813.1| Chaperone protein ClpB [Listeria monocytogenes serotype 4b str.
LL195]
Length = 866
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/864 (50%), Positives = 616/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + H+ LL++ FA+ + + E
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESD--FAKRVYDVA-EVDID 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++ A+ K+P S + S L +++R A+ QK D ++ + LIL ++
Sbjct: 58 ALQKTVEDALTKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQKQLDDDFVSTEHLILAVM 117
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K+ + +++ + K+RG G+KV S + + ++AL YGRDLV +
Sbjct: 118 DQKSNPITMNLKKQHKSKKQIQEAILKIRG--GKKVTSQNAEENYEALTKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEILQRELADYKEEANQMKSKWESEKNEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I V + + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGKIPAVEKELLELEAENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADELHQKVIGQDDAVQLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYVGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEITITISDNAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID + K
Sbjct: 835 PLAREIVSGKIMPHSSVEIDLADK 858
>gi|298246165|ref|ZP_06969971.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963]
gi|297553646|gb|EFH87511.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963]
Length = 864
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/856 (52%), Positives = 596/856 (69%), Gaps = 26/856 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M ++FT K +AI A E+A S HAQ P HL ALL G+ Q I AGG + Q
Sbjct: 1 MKIERFTEKARQAIYEASEIARSRNHAQVEPEHLLNALLLQEGGVVPQIIQKAGG--STQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
+ R + +L S+ + S L KV+ A + D +++V+ L+L L +
Sbjct: 59 AVLRRVESDLDRL-SRVYGGSDPGISPRLHKVLNDAWSEMGKFKDEYMSVEHLLLALFDS 117
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
D++ + AG++ V + +RG ++V + + +QAL+ YGR+L A GK
Sbjct: 118 DTEARKALQSAGLSRDSVLQALTSIRG--AQRVTDQNPEGKYQALEKYGRNLTAAAREGK 175
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP L + +
Sbjct: 176 LDPVIGRDEEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPKTLENKQ 235
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ LD+ ALVAGAK+RGEFEERLKAVLKEV A+G +ILFIDE+H ++GAG EG+MDA+
Sbjct: 236 VVTLDLSALVAGAKFRGEFEERLKAVLKEVTSAQGGIILFIDELHTLVGAGAAEGAMDAS 295
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPMLARG+L CIGATTL+EYRK++EKDAA ERRFQ V V PSV DT+SILRGLK +
Sbjct: 296 NMLKPMLARGELHCIGATTLDEYRKHIEKDAALERRFQPVLVDPPSVEDTISILRGLKPR 355
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRIQD A+V AA LS RYIT R LPDKAIDL+DEA ++ RV+LDS P EID L+
Sbjct: 356 YEVHHGVRIQDSAIVAAAMLSNRYITDRFLPDKAIDLIDEAASHRRVELDSTPTEIDALD 415
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ QL++E AL+KE D AS+ R V ++ +L ++L+ L + + E+ +DE+R LK
Sbjct: 416 RRIRQLQVEQEALKKETDPASRERRERVEADIANLNEQLRSLKLALESERAPVDELRSLK 475
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS--DENLMLTETVGPD 535
++ EE ++AER YD A LRYG I+E+E I +E S + ML E V +
Sbjct: 476 KQLEEAQVQYEQAERSYDYESMARLRYGTIKELEERIQAMEAKLSAGGSSRMLKEEVDAE 535
Query: 536 QIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGRP 584
+A +VS+WT IPV+++ + E +ER++G +A+ AV++++ RSRAGL P
Sbjct: 536 DVANIVSKWTHIPVSKMMEGEVQKLLHMEERLRERVVGQEQALEAVSDAIRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P SFLFLGPTGVGKTELA+ALAE LFDDE +VRIDMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPLASFLFLGPTGVGKTELARALAEFLFDDEQAMVRIDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRR PYSV+L DE+EKA VFN LLQ+LDDGRLTDGQGRTVDFRNTV+
Sbjct: 656 GYEEGGQLTEAVRRHPYSVILLDEIEKAAPEVFNVLLQLLDDGRLTDGQGRTVDFRNTVV 715
Query: 705 IMTSNLGAE--HLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+G H GM + + R ++ +E FRPE +NR+DE+++F P+S EQ+
Sbjct: 716 IMTSNVGTTWLHEYDGMDEEDVQRTVRQRLREE---GFRPEFINRIDEVIIFHPISKEQV 772
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
R + +Q+ + RLAER + L +TDAA D + E YDP +GARP++R ++K+V ++R
Sbjct: 773 RNIVDIQINRLRPRLAERHITLQLTDAAKDYLAEEGYDPQFGARPLKRTIQKEVENRIAR 832
Query: 823 MLVREEIDENSTVYID 838
++ + + TV ID
Sbjct: 833 AILDGSVRDGDTVQID 848
>gi|390452276|ref|ZP_10237823.1| ATP-dependent chaperone ClpB [Nitratireductor aquibiodomus RA22]
gi|389659932|gb|EIM71671.1| ATP-dependent chaperone ClpB [Nitratireductor aquibiodomus RA22]
Length = 873
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/869 (51%), Positives = 604/869 (69%), Gaps = 24/869 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ + I A A ++ H QFTP HL L+ D G+ A I AGG A+
Sbjct: 1 MNFEKYSERVRGFIQAAQTFALTSNHQQFTPEHLLKVLVDDEEGLAASLIERAGGR--AE 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A+K +P ++ + L KV A+ K GD+ + V++L+ L +
Sbjct: 59 DVRLGVEAALKAMPQVEGGNGQLYMAQPLAKVFSTAEELAKKAGDSFVTVERLLTALAVE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ D+ AGV + + +R +GR +SAS + + ALK Y RDL +AG
Sbjct: 119 KSAKTADILSRAGVTPTALNQAINDIR--KGRTADSASAEQGYDALKKYARDLTADARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV A G +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVTAASGNIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ EKD+AS+ RL ++ KEL DL ++ L + EK+++ L
Sbjct: 417 DRRIMQLKIEREALKAEKDEASRDRLAKLEKELTDLEEESTRLTSLWAAEKDKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL--MLTETVGP 534
K++ +E L A+R+ + RA +L YG I E+E + + E +E M+ ETV P
Sbjct: 477 KKQLDEARNELAIAQRKGEFQRAGELAYGQIPELEKRLAEAEAQGEEEGATGMVEETVKP 536
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
D +A +VSRWTGIPV ++ + E+E+L +G EAV AV+++V R+RAGL
Sbjct: 537 DHVAHIVSRWTGIPVDKMLEGEREKLLRMEDELARRVVGQGEAVQAVSKAVRRARAGLQD 596
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSF+FLGPTGVGKTEL KALA LFDDE +VRIDMSE+ME+HSV+RLIGAPPGY
Sbjct: 597 PNRPIGSFMFLGPTGVGKTELTKALASFLFDDEQAMVRIDMSEFMEKHSVARLIGAPPGY 656
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+
Sbjct: 657 VGYEEGGVLTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTL 716
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
I+MTSNLG+E+L++ G +V R +V+ V+ FRPE LNR+DE+++F L + +
Sbjct: 717 IVMTSNLGSEYLVNLGEGDDVDKV-RSEVMDVVKASFRPEFLNRIDEVILFHRLRRQDMG 775
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +Q++ + LA+R + L + A++ + + YDP YGARP++R ++K++ L+
Sbjct: 776 QIVEIQLQRLERLLADRKITLDLDGEAIEWLANKGYDPAYGARPLKRVIQKELQDPLAEK 835
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRVQK 852
+++ EI + STV + A D L +R +K
Sbjct: 836 ILQGEIFDGSTVKVTAG--SDRLNFRTRK 862
>gi|307243262|ref|ZP_07525433.1| ATP-dependent chaperone protein ClpB [Peptostreptococcus stomatis
DSM 17678]
gi|306493390|gb|EFM65372.1| ATP-dependent chaperone protein ClpB [Peptostreptococcus stomatis
DSM 17678]
Length = 862
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/860 (50%), Positives = 602/860 (70%), Gaps = 27/860 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K T + A+ A A + Q +HL ALL G+ + +++
Sbjct: 1 MNVEKMTLRVQNALNDAFSEAVRNNNQQVDVIHLLYALLDQEDGLIPNIVEKMN--ISSE 58
Query: 61 SAERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S ++ + KLPS T + A+ + +++ A+ D++++V+ ++L +
Sbjct: 59 SLKKSVKNEISKLPSVTGGGANSQGVTATRGINEIMVNAEKIADDFKDSYISVEHIMLAI 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
+ S IG +F + G+ + + ++RG + +V+S + + AL YG +LV+
Sbjct: 119 FDKEKSSVIGRIFGQYGLVKQEFLNVLHQVRGNQ--RVDSQDPEGIYDALTKYGTNLVKL 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A KLDPVIGRDEEIRR +RILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP
Sbjct: 177 AENNKLDPVIGRDEEIRRAIRILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + +LDMGAL+AGAKYRGEFEERLKAVLKEV +EGK+ILFIDEIH ++GAG+TEG
Sbjct: 237 LKDKVIFSLDMGALIAGAKYRGEFEERLKAVLKEVSSSEGKIILFIDEIHTIVGAGKTEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA NL KPMLARG+L CIGATT +EYRKY+EKD A ERRFQ V V EPS+ DT+SILR
Sbjct: 297 SMDAGNLIKPMLARGELNCIGATTFDEYRKYIEKDKALERRFQPVIVDEPSLEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHG+RI D A+V AA+LS RYI R LPDKAIDL+DEA A +R ++DS P +
Sbjct: 357 GLKERFEIHHGIRIHDNAIVAAAKLSDRYIQDRFLPDKAIDLIDEAGAMIRSEIDSLPTD 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ + LE E AL KE+D+ SK+RL E+ KEL DL+++ + RY+KEK RI E
Sbjct: 417 LDIVRRRLLMLETEREALLKEEDEKSKSRLEELEKELADLKEENDSMTARYEKEKNRITE 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN--LMLTE 530
++ LK +E +++ ER YD +AA++++G I ++E I E E+ +L E
Sbjct: 477 LKVLKSNLDEARAKVEKYEREYDFNKAAEVKFGQIPKLEEEIKNFEDKYDSESGESLLKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRA 579
V ++IA+++S+WTGIPV++L + EK +R+IG EAV AV+ ++LRSRA
Sbjct: 537 EVTENEIADIISKWTGIPVSKLVETEKAKLLNLENQLHKRVIGQDEAVTAVSNAILRSRA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL ++P GSF+FLGPTGVGKTELAK LA LFD E+ +VRIDMSEYME+HSVSRL+G
Sbjct: 597 GLSDQKKPMGSFIFLGPTGVGKTELAKTLARDLFDSEDSIVRIDMSEYMEKHSVSRLVGP 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEA+RR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF
Sbjct: 657 PPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+N++IIMTSN+G+ LL G + V+ + VL+++R F+PE LNR+D+I++F PL
Sbjct: 717 KNSLIIMTSNIGSSTLLEA-GGNIDENVS-ESVLKQMRSRFKPEFLNRVDDIIMFKPLMK 774
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
+++++V + D+A RL+E +++ +T+AA D+++ E+YDP+YGARP++R++ + T
Sbjct: 775 DEIKQVIDIFFADLAARLSENNISVDLTEAAKDLMIKEAYDPVYGARPLKRYISNNIETI 834
Query: 820 LSRMLVREEIDENSTVYIDA 839
L+R ++ +I V ID+
Sbjct: 835 LARKIIGGQIKPGDRVKIDS 854
>gi|111022480|ref|YP_705452.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus jostii
RHA1]
gi|397735876|ref|ZP_10502562.1| ATP-dependent chaperone ClpB [Rhodococcus sp. JVH1]
gi|110822010|gb|ABG97294.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus jostii
RHA1]
gi|396928169|gb|EJI95392.1| ATP-dependent chaperone ClpB [Rhodococcus sp. JVH1]
Length = 850
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/865 (52%), Positives = 594/865 (68%), Gaps = 38/865 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + A+SAG+ P HL VALL GI A + G +
Sbjct: 4 FNP---TTKTQAAMTAALQSASSAGNPDIRPAHLLVALLDQTDGIAAPLLKAVGVDPTV- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
R + +LP T A + + AQ D +++ + L++GL
Sbjct: 60 -VHREGQDLVDRLPKTTGATTTPQLGREALAALTAAQHLATELDDEYVSTEHLMVGLASG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+S + L K G ++ +RG +V S + T+QAL+ Y DL A GK
Sbjct: 119 ESDVAGLLKRHGATPEALRDAFTTVRGSA--RVTSPDPEGTYQALEKYSTDLTALARNGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKS 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+I+LD+G++VAGAKYRGEFEERLKAVL +++ + G+VI FIDE+H ++GAG T E +MDA
Sbjct: 237 VISLDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTLEEYRKY+EKDAA ERRFQQV V EPSV DTV ILRGLKE
Sbjct: 297 GNMIKPMLARGELRLVGATTLEEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEEID +
Sbjct: 357 RYEVHHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDTV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE AL+KE D ASK RL ++R+EL D R+KL L R++ EK+ ID +R +
Sbjct: 417 ERIVRRLEIEEMALQKESDAASKDRLEKLRQELADEREKLNQLTTRWQNEKQAIDSVRGV 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL---EGNQSDENLMLTETVG 533
K++ E L + AER DL RAA+LRYG I ++E + Q G +D ++ML E VG
Sbjct: 477 KEQLETLRGEEERAERDGDLGRAAELRYGRIPQLEKELEQAARESGAAADGDVMLKEEVG 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
PD +A+VV+ WTGIP R+ + E +R++G EAV AV+++V R+RAG+
Sbjct: 537 PDDVADVVAAWTGIPAGRMMEGETAKLLRMESELGKRVVGQEEAVVAVSDAVRRARAGVA 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +PTGSFLFLGPTGVGKTELAK+LA+ LFDDE +VRIDMSEY E+HSV+RL+GAPPG
Sbjct: 597 DPNRPTGSFLFLGPTGVGKTELAKSLADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+E GGQLTEAVRRRPY+VVLFDEVEKAH VF+ LL VLD+GRLTDGQGRTVDFRNT
Sbjct: 657 YVGYEAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLAVLDEGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++I+TSNLGA +R+QV+ VR F+PE +NRLD++V+F+ L+ EQL
Sbjct: 717 ILILTSNLGAGG-------------SREQVMDAVRHAFKPEFINRLDDVVIFESLTEEQL 763
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ ++ RLA R + L V+D+A + YDP+YGARP+RR +++ + +L++
Sbjct: 764 ESIVDIQLDQLSRRLAARRLTLDVSDSARFWLAVRGYDPMYGARPLRRLIQQAIGDQLAK 823
Query: 823 MLVREEIDENSTVYIDASPKGDNLV 847
+L+ ++ + TV + S GD LV
Sbjct: 824 LLLAGDVKDGDTVPVKVSETGDALV 848
>gi|423366983|ref|ZP_17344416.1| chaperone ClpB [Bacillus cereus VD142]
gi|401086766|gb|EJP94987.1| chaperone ClpB [Bacillus cereus VD142]
Length = 866
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/874 (51%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL + LL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLTLLEQQDGLTVRIFQKMNVDIEVL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KTDVESL----IKKKPSVTGSGAEAGKLYVTGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I L + + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLLTKFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDLGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLEGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + ++++ RLA+R ++L +T++A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV RV+
Sbjct: 835 TKLARELIAGVITDNSHVVVDV--ENNELVVRVK 866
>gi|302381391|ref|YP_003817214.1| ATP-dependent chaperone ClpB [Brevundimonas subvibrioides ATCC
15264]
gi|302192019|gb|ADK99590.1| ATP-dependent chaperone ClpB [Brevundimonas subvibrioides ATCC
15264]
Length = 862
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/858 (51%), Positives = 598/858 (69%), Gaps = 20/858 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN D ++ + +A+ A LA + H QF P HL LL + G+ I AGG+ A
Sbjct: 1 MNLDLYSDRAKQAVQSAQSLALARKHQQFAPEHLLKVLLEERDGLARNLITAAGGDPAKA 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-E 119
+ +KK P ++ +V A+AA K +GD + ++++ + E
Sbjct: 61 ADAA--EALLKKRPQVESTNSQLYLDGATARVFAGAEAAAKKNGDAFVTTERILAAIARE 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
GD K AGV ++ + V +R +G+ +SA + ++ALK Y RDL + A GK
Sbjct: 119 GGPAGDALKSAGVTADKLDTAVADIR--KGKTADSAGAEDAYEALKRYARDLTQAARDGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DPVIGRDEEIRR +++L+RRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 IDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMG+L+AGAKYRGEFEERLKAVL EV AEG++ILFIDE+H ++GAG+ +G+MDA+
Sbjct: 237 VMALDMGSLIAGAKYRGEFEERLKAVLGEVTAAEGQIILFIDEMHTLVGAGKGDGAMDAS 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L C+GATTL+EYRKY+EKDAA RRFQ V++ EPSV DTVSILRGLKEK
Sbjct: 297 NLLKPALARGELHCVGATTLDEYRKYIEKDAALARRFQSVFIDEPSVEDTVSILRGLKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA + VR+ +DS+PE +D ++
Sbjct: 357 YEVHHGVRISDSAIVAAATLSNRYITDRFLPDKAIDLIDEAGSRVRMAVDSKPESLDEID 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL+IE AL+KE D ASK RL + E+ DL+ + L R+K EK+++ + +L+
Sbjct: 417 RRLVQLKIEREALKKETDTASKLRLERLDDEISDLQVESDALTTRWKAEKDKVGQGAQLR 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPDQ 536
+ + L L A+R DL RA+++ YG I ++E ++ Q E +++ LT E V +Q
Sbjct: 477 ETLDRLRAELAAAQRNGDLGRASEIAYGQIPQIEKSLDQAEADENAGGGPLTPEVVDAEQ 536
Query: 537 IAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGRPQ 585
IA VVSRWTG+PV ++ + E+E+L+ + + A+ AVA++V R+RAGL P
Sbjct: 537 IAAVVSRWTGVPVDKMLEGEREKLLSMEDALRGRVVGQDAALEAVADAVRRARAGLNDPN 596
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSFLFLGPTGVGKTEL KALA LFDDE + R+DMSEYME+HSVSRLIGAPPGYVG
Sbjct: 597 RPLGSFLFLGPTGVGKTELTKALAAFLFDDETAITRMDMSEYMEKHSVSRLIGAPPGYVG 656
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGR VDF+NT++I
Sbjct: 657 YDEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRVVDFKNTLLI 716
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLG++ L + G+ ++ R V+ VR HFRPE LNR+DEI++F L +Q+ +
Sbjct: 717 MTSNLGSDALANQADGE-DVEAVRPFVMDAVRAHFRPEFLNRIDEIILFRRLGRDQMAGI 775
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
R+Q+ + +A+R + L++ D AL + + YDP+YGARP++R ++K +V +++ L+
Sbjct: 776 VRIQLARLEKLMADRRLTLSIDDGALAWLADKGYDPVYGARPLKRVIQKDLVDPMAKKLL 835
Query: 826 REEIDENSTVYIDASPKG 843
E+++ S + + A G
Sbjct: 836 AGELEDGSVIAVSAGADG 853
>gi|110635325|ref|YP_675533.1| ATPase [Chelativorans sp. BNC1]
gi|110286309|gb|ABG64368.1| ATPase AAA-2 [Chelativorans sp. BNC1]
Length = 891
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/868 (52%), Positives = 608/868 (70%), Gaps = 23/868 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K++ + I A LA S H QF+P H+ L+ D G+ A I AGG A+
Sbjct: 24 MDIEKYSERVRGFIQAAQTLALSRNHQQFSPEHILKVLVDDEEGLAANLIERAGGR--AR 81
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
+ + A++ LP ++ + L KV A+ K GD+ + V++L++ L
Sbjct: 82 DVKLGVDAALEALPRVEGGSGQLYLAQPLAKVFSTAEELAKKAGDSFVTVERLLMALAME 141
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ ++ D+ +AGV + + +R +GR +S + + + ALK Y RDL +A G
Sbjct: 142 KSAKSADILAKAGVTPTALNQVINDIR--KGRTADSPNAEQGYDALKKYARDLTAEARAG 199
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 200 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 259
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL E++ A G VILFIDE+H ++GAG+ +G+MDA
Sbjct: 260 QLMALDMGALIAGAKYRGEFEERLKAVLSEIQAAAGGVILFIDEMHTLVGAGKADGAMDA 319
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRKYVEKDAA RRFQ VYV EPSV DT+SILRGLKE
Sbjct: 320 SNLLKPALARGELHCVGATTLDEYRKYVEKDAALARRFQPVYVNEPSVEDTISILRGLKE 379
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 380 KYEQHHKVRVSDSALVAAANLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEV 439
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL EKD+ASK RL + +EL +L ++ + +++ EK+++ L
Sbjct: 440 DRRIMQLKIEREALRVEKDEASKDRLERLERELAELEEQSANITAKWQAEKQKLGLAAEL 499
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ +E L A+R+ + RA +L YG I E+E + + E Q + ++ ETV PD
Sbjct: 500 KKQLDEARNDLAIAQRKGEFQRAGELAYGRIPELEKKLKEAE-EQDGKGSLVEETVTPDH 558
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
+A +VSRWTGIPV ++ Q E+E R+IG EAV AV+++V R+RAGL P
Sbjct: 559 VAHIVSRWTGIPVDKMLQGEREKLLRMEDELAKRVIGQGEAVQAVSKAVRRARAGLQDPN 618
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDDE +VRIDMSE+ME+HSV+RLIGAPPGYVG
Sbjct: 619 RPLGSFMFLGPTGVGKTELTKALAAFLFDDEQAMVRIDMSEFMEKHSVARLIGAPPGYVG 678
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 679 YDEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLII 738
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ G+ +V RD+V+ V+ FRPE LNR+DEI++F L + + +
Sbjct: 739 MTSNLGAEYLVNLAEGEDVDKV-RDEVMAVVQASFRPEFLNRVDEIILFHRLRRQDMGDI 797
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
R+Q+K + L +R + L + A+D + + YDP YGARP++R ++K++ L+ ++
Sbjct: 798 VRIQLKRIGRLLEDRKITLELDQEAIDWLADKGYDPAYGARPLKRVMQKELQDPLAEKIL 857
Query: 826 REEIDENSTVYIDASPKGDNLVYRVQKN 853
EI + STV I A D L++R +KN
Sbjct: 858 MGEIFDGSTVKITAG--SDRLIFRPRKN 883
>gi|410456268|ref|ZP_11310132.1| Class III stress response-related ATPase [Bacillus bataviensis LMG
21833]
gi|409928276|gb|EKN65392.1| Class III stress response-related ATPase [Bacillus bataviensis LMG
21833]
Length = 864
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/856 (50%), Positives = 601/856 (70%), Gaps = 23/856 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T + + I A LA H + HL + L+ + A AG ++
Sbjct: 1 MDLNRMTERLQKGIMDAETLAIRENHQEIDEPHLFLTLMDQEDSLIAAIFEKAG--MPSE 58
Query: 61 SAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILG- 116
++ ++ K P T + E + + L K++ A+ D +++V+ +L
Sbjct: 59 KVKKNLLDSLAKKPQVTGSGVEQGKLYITAKLQKLLVSAEEFASKFADEYISVEHFLLAA 118
Query: 117 -LLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ- 174
DS I + + G + ++++RG + +V S + + + ALK YGRDLV +
Sbjct: 119 AYANDSAIKKIIQAFGKTPETILKAIKEIRGNQ--RVTSQNPEAGYDALKKYGRDLVAEV 176
Query: 175 -AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
AGK+DPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 177 KAGKMDPVIGRDTEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGL 236
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D + +LDM +L+AGAK+RGEFEERLKAVL E++++EG+++LFIDEIH ++GAG+TEG+
Sbjct: 237 KDKTIFSLDMSSLIAGAKFRGEFEERLKAVLNEIKKSEGQILLFIDEIHTIVGAGKTEGA 296
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA N+ KPMLARG+L CIGATTL+E+RKY+EKD A ERRFQQV V EP++ DT+SILRG
Sbjct: 297 MDAGNMLKPMLARGELHCIGATTLDEHRKYIEKDPALERRFQQVLVQEPNIEDTISILRG 356
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE++E HHGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E+
Sbjct: 357 LKERFEVHHGVKIHDHALVAAATLSDRYITDRFLPDKAIDLVDEACAMIRTEIDSMPTEL 416
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D + R+ MQLEIE AL KE D+ SK RL + KEL DL+++ + ++ +EK+ I ++
Sbjct: 417 DEVTRRVMQLEIEEAALRKESDEGSKLRLGVLVKELADLKEQANTMKAKWLQEKQSIQKV 476
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVG 533
+ +++ E+L LQ+AE +YDL RAA+LR+G I E + +LE + ++ +L E V
Sbjct: 477 QDKREQLEKLRRELQQAEDKYDLNRAAELRHGQIPLTEKELKELESGAAKDDRLLREEVT 536
Query: 534 PDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLG 582
++I+ +VSRWTGIP+++L G+ EK ER+IG EAVN VA++VLR+RAG+
Sbjct: 537 GEEISNIVSRWTGIPLSKLVEGEREKLLKLESILHERVIGQNEAVNLVADAVLRARAGIK 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAKALAE LFD E ++RIDMSEYME+HSVSRLIGAPPG
Sbjct: 597 DPNRPIGSFLFLGPTGVGKTELAKALAESLFDSEEQIIRIDMSEYMEKHSVSRLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRRRPYSV+L DEVEKAH VFN LLQ LDDGR+TD QGR VDF+NT
Sbjct: 657 YVGYEEGGQLTEAVRRRPYSVILMDEVEKAHPEVFNILLQALDDGRITDSQGRVVDFKNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQ-VARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
VIIMTSN+G+ LL ++ + R++V+ ++R HFRPE LNR+DEI++F LS +
Sbjct: 717 VIIMTSNIGSHFLLERSENEIEISDGTREKVMSQLRTHFRPEFLNRIDEIILFKSLSLAE 776
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
++ + MK++ RL ++ + +++++ A + + +DPIYGARP++R++++ + T+L+
Sbjct: 777 IKNIVVKMMKELENRLKQQQINISISEDAKEFIAVNGFDPIYGARPLKRYIQRNIETKLA 836
Query: 822 RMLVREEIDENSTVYI 837
R ++ + + STV I
Sbjct: 837 REIIAGRVYDQSTVDI 852
>gi|334141396|ref|YP_004534602.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Novosphingobium sp. PP1Y]
gi|333939426|emb|CCA92784.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Novosphingobium sp. PP1Y]
Length = 859
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/855 (53%), Positives = 594/855 (69%), Gaps = 24/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + + A +A H + + H+ ALL DP G+ A I AGG Q
Sbjct: 1 MNLEKFTDRAKGFLQAAQTVAIRLNHQRISSEHILKALLDDPEGMAAGLIKRAGGN--PQ 58
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A ++A+ K+P S + A ++V+ A+ A GD+ + V++L+L L+
Sbjct: 59 FATDELDKALAKVPVVSGSGAQGAPGLDNDAVRVLDAAEQAATKSGDSFVTVERLLLALV 118
Query: 119 EDSQI--GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
S G K A V +++ + +LRG GR +SA + + A+K Y RDL E A
Sbjct: 119 LASTTPAGQALKAANVTAQALEAAITELRG--GRTADSAGAENAYDAMKKYARDLTEAAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRR V+IL+RRTKNNPVLIG+PGVGKTA+ EGLA RI GDVP +L
Sbjct: 177 EGKLDPVIGRDEEIRRTVQILARRTKNNPVLIGDPGVGKTAIAEGLALRIANGDVPDSLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D RL+ALDMGAL+AGAKYRGEFEERLKAVL EV+ AEG +ILFIDE+H ++GAG +EGSM
Sbjct: 237 DRRLMALDMGALIAGAKYRGEFEERLKAVLDEVKGAEGDIILFIDEMHTLIGAGASEGSM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KP LARG+L CIGATTL+EY+KYVEKDAA +RRFQ V+V EP+V DT+SILRGL
Sbjct: 297 DAGNLLKPALARGELHCIGATTLDEYQKYVEKDAALQRRFQPVFVGEPTVEDTISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KEKYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA + +R++++S+PEEI+
Sbjct: 357 KEKYELHHGVRITDGAIVAAATLSNRYITNRFLPDKAIDLMDEAASRIRMEVESKPEEIE 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L+R+ +QL+IE AL KE D+AS RL +R+EL +L + L R++ E+++I
Sbjct: 417 KLDRRIIQLKIEESALGKETDEASADRLRSLREELANLEQQSSELTTRWQNERDKIAAEG 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
+LK++ + L++A+R DLARA +L YG I +E + E N +L E V
Sbjct: 477 KLKEQLDAARLELEQAQRSGDLARAGELSYGTIPNLEKQLA--EAQDQSANALLREEVTE 534
Query: 535 DQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D IA VVSRWTG+PV ++ G+ EK ER+IG +AV AV+++V R+RAGL
Sbjct: 535 DDIAGVVSRWTGVPVDKMLEGEREKLLKMEQVIGERVIGQEQAVQAVSKAVRRARAGLQD 594
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL KALA LFDD++ +VRIDMSE+ME+H+V+RLIGAPPGY
Sbjct: 595 PNRPLGSFLFLGPTGVGKTELTKALAGFLFDDDSAMVRIDMSEFMEKHAVARLIGAPPGY 654
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGR VDF NT+
Sbjct: 655 VGYEEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRLVDFTNTL 714
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
II+TSNLG+++L GK ++ QV++ VR HFRPE LNRLDEI++F L + +
Sbjct: 715 IILTSNLGSQYLTQIEDGK-DVESVEPQVMEVVRAHFRPEFLNRLDEIILFHRLGQDHMG 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q+ V L +R + L +TDAA + YDP+YGARP++R +++ + L+
Sbjct: 774 PIVEIQVSRVQKLLKDRKIELDLTDAAKRWLGRVGYDPVYGARPLKRAVQRYLQDPLAEK 833
Query: 824 LVREEIDENSTVYID 838
L+ EI + STV ID
Sbjct: 834 LLAGEIPDGSTVRID 848
>gi|384500351|gb|EIE90842.1| hypothetical protein RO3G_15553 [Rhizopus delemar RA 99-880]
Length = 863
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/843 (53%), Positives = 595/843 (70%), Gaps = 35/843 (4%)
Query: 31 PLHLAVALLSDPSG--IFAQAINNAGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTT 88
P H+A AL + G +F + G E A ER + + + LPSQ PAP EI S
Sbjct: 2 PAHIACALFDETEGTPLFKSILEKTGVETTA--VERGYKKLLVHLPSQDPAPTEISLSPQ 59
Query: 89 LIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKE 148
K++R A+ K DT +++D LIL L ++ +EAGV +++ V ++RG
Sbjct: 60 TGKLLRHAEKHMKDQKDTFISIDHLILALADEDSSFRPMQEAGVTKKALEAAVAQVRG-- 117
Query: 149 GRKVESASGDTTFQALKTYGRDLVE--QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLI 206
R+V+S + + ++AL Y DL + Q GKLDPVIGRD+EIRRV+R+L+RRTKNNPVLI
Sbjct: 118 NRRVDSKNAEEVYEALSKYAIDLTQMAQHGKLDPVIGRDDEIRRVIRVLARRTKNNPVLI 177
Query: 207 GEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKE 266
GEPGVGKTA+VEGLA+RI+ DVP +L +L +LDMGAL+AGAKYRGEFEERLKAVLKE
Sbjct: 178 GEPGVGKTAIVEGLARRIIERDVPQSL-QCKLFSLDMGALIAGAKYRGEFEERLKAVLKE 236
Query: 267 VEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEK 326
V+++E +ILFIDEIH VLGAG+ EGSMDAANL KPMLARG+LRCIGATTL EYR+ +EK
Sbjct: 237 VKDSEEGIILFIDEIHTVLGAGKGEGSMDAANLLKPMLARGELRCIGATTLTEYRE-IEK 295
Query: 327 DAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRH 386
D AFERRFQ+V V EPSVP TVSILRGLKE+YE +HGV+I D ALV AAQLS RYIT R+
Sbjct: 296 DPAFERRFQKVDVGEPSVPATVSILRGLKERYENYHGVKITDSALVSAAQLSDRYITTRY 355
Query: 387 LPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIELHALEKEK-DKASKARLVEV 445
LPDKAIDL+DEA AN RVQLDS+PEEID LER+R QLEIE+ AL KEK +K S RL V
Sbjct: 356 LPDKAIDLIDEAAANARVQLDSKPEEIDILERRRFQLEIEVKALSKEKNNKESNERLQAV 415
Query: 446 RKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYG 505
++E+ + ++L+PL ++Y+ K R+DEIR LKQK ++L A+ YDL AAD+ Y
Sbjct: 416 QEEIARINEELKPLKLKYELTKGRLDEIRDLKQKLDDLKSKATMAKNNYDLDTAADIEYY 475
Query: 506 AIQEVEAAIGQLEG-----------NQSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQ 554
AI +VE I +L+ N ++M++E V P+QI EVVSRWTGIPV L +
Sbjct: 476 AIPDVEQRIAELQAEKQRKISEDLSNDQPADVMVSEVVRPEQIMEVVSRWTGIPVQSLAK 535
Query: 555 NEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTE 603
+E+E+L +G A+ AV +++ S+AGL P +P SF+FLGPTGVGKT
Sbjct: 536 SEREKLLAMESEISRHVVGQDAAIKAVCDAIRLSKAGLQDPHKPLASFMFLGPTGVGKTL 595
Query: 604 LAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSV 663
L K LAE LF+DE L+RIDMSE MEQHSV++LIGAPPGYVGHEEGG L E+VRR+PYSV
Sbjct: 596 LCKTLAEFLFNDERALIRIDMSELMEQHSVAKLIGAPPGYVGHEEGG-LFESVRRKPYSV 654
Query: 664 VLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKV 723
VL DE+EKAH V N LLQVLD+G + D +GR +DFRNT+I+MTSNLGA LL+
Sbjct: 655 VLLDELEKAHRDVANVLLQVLDEGFIHDSKGRRIDFRNTIIVMTSNLGA-GLLADQHQDK 713
Query: 724 TMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVA 783
+ + ++++++ VRKHF PE NR+DE+V+F+ L+ + + +++K++ RLA+R +
Sbjct: 714 DINLLKERIMEVVRKHFSPEFTNRIDELVIFNRLTQNNITNIVDVRLKEIEERLADRRIT 773
Query: 784 LAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYIDASPKG 843
L V+ A + + A+ Y+PI+GARP+ R +++KV+ +L+++++ I ++ S G
Sbjct: 774 LQVSPPAKEWLGAQGYEPIFGARPLNRLIQQKVLNQLAKLIIDGGIRNGEVAQVELSADG 833
Query: 844 DNL 846
+
Sbjct: 834 STI 836
>gi|423552996|ref|ZP_17529323.1| chaperone ClpB [Bacillus cereus ISP3191]
gi|401184722|gb|EJQ91820.1| chaperone ClpB [Bacillus cereus ISP3191]
Length = 866
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/874 (52%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++++ ++L
Sbjct: 61 KQGAENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISIEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IAE+VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIAEIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|87124024|ref|ZP_01079874.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. RS9917]
gi|86168593|gb|EAQ69850.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. RS9917]
Length = 865
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/861 (52%), Positives = 614/861 (71%), Gaps = 28/861 (3%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENA 58
M P ++FT K AI A +LA S H Q HL +ALL + +G+ ++ + AG
Sbjct: 1 MQPTAEQFTEKAWAAILSAQQLAQSRRHQQLETEHLLLALL-EQNGLASRILEKAGVSPP 59
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A ++ V ++ Q+P P+ + L + RA ++ +GD++L+++ L+L L
Sbjct: 60 ALTSA-VDTHLNQQAALQSP-PESVYLGKGLSDLFDRADGLKQTYGDSYLSIEHLLLALA 117
Query: 119 EDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
ED + G L +AGV +K+ V+ +RG + KV + + T+++L+ YGRDL A
Sbjct: 118 EDPRCGKRLLSQAGVDAQGLKTAVDAVRGSQ--KVTDQNPEGTYESLEKYGRDLTAAARD 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 176 GKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPQALQN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LIALDMGAL+AGAKYRGEFEERLKAVLKEV +EG+++LFIDEIH V+GAG T G+MD
Sbjct: 236 RQLIALDMGALIAGAKYRGEFEERLKAVLKEVTASEGRIVLFIDEIHTVVGAGATGGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KPMLARG+LRCIGATTL+E+R+++EKD A ERRFQQV V +P+V DT+SILRGLK
Sbjct: 296 ASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVEDTISILRGLK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV AA LS+RYI R LPDKAIDLVDE+ A +++++ S+PEEID
Sbjct: 356 ERYEVHHGVRIADSALVAAAVLSSRYIADRFLPDKAIDLVDESAARLKMEITSKPEEIDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +L +E D AS+ RL + +EL +L ++ L ++++EK IDE+
Sbjct: 416 IDRKILQLEMEKLSLGRESDAASQERLERLERELAELAEQQSSLNAQWQQEKGAIDELSA 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEV-------EAAIGQLEGNQSDENLML 528
LK++ E++ +++A+R YDL +AA+L YG + + EAA+ +G + E +L
Sbjct: 476 LKEEIEKVQLQVEQAKRNYDLNKAAELEYGTLATLQKQLSAKEAALAGDDGGSNGEKSLL 535
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGL-----------AEAVNAVAESVLRS 577
E V D IAEV+++WTGIPV +L Q+E E+L+GL +AV AVA+++ RS
Sbjct: 536 REEVTEDDIAEVIAKWTGIPVAKLVQSEMEKLLGLEDQLHERVVGQQQAVTAVADAIQRS 595
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGL P +P SFLFLGPTGVGKTEL+KALA QLFD E+ +VRIDMSEYME+HSVSRLI
Sbjct: 596 RAGLSDPHRPIASFLFLGPTGVGKTELSKALAAQLFDSEDAMVRIDMSEYMEKHSVSRLI 655
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+E GGQLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTV
Sbjct: 656 GAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTV 715
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF N V+I+TSN+G++ +L +V +R HFRPE LNRLDE ++F L
Sbjct: 716 DFTNAVLILTSNIGSQSILDLGGDDSQHSEMERRVNDALRAHFRPEFLNRLDETIIFHSL 775
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
E+L ++ LQ++ + RL++R + L+++ A D + YDP+YGARP++R +++++
Sbjct: 776 RREELHRIVNLQVERLRQRLSDRKLGLSISAGATDWLANAGYDPVYGARPLKRAIQRELE 835
Query: 818 TELSRMLVREEIDENSTVYID 838
T +++ ++ + +TV ++
Sbjct: 836 TPIAKAILAGRFSDGTTVQVE 856
>gi|228996347|ref|ZP_04155990.1| Chaperone protein clpB 1 [Bacillus mycoides Rock3-17]
gi|229004011|ref|ZP_04161815.1| Chaperone protein clpB 1 [Bacillus mycoides Rock1-4]
gi|228757225|gb|EEM06466.1| Chaperone protein clpB 1 [Bacillus mycoides Rock1-4]
gi|228763386|gb|EEM12290.1| Chaperone protein clpB 1 [Bacillus mycoides Rock3-17]
Length = 866
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/874 (51%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLQQQDGLAVRIFQKMNVNIEQL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
+ ER+ ++K PS T + E + + L +++ +A+A K D +++V+ ++L
Sbjct: 61 TKEVERL----LQKKPSVTGSGVEAGKVYVTNALGQLLVKAEAEAKKLQDEYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ + LF + + + ++RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFCEEKGDMNHLFTAFHITKDTLLQSLMEVRGNQ--RVTSQNPEVTYEALEKYGRDLVAE 174
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
GK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP
Sbjct: 175 VRQGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVANGMRAQWQKEKEEIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAMEKELREAEETGAHNEQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA +VSRWTGIPV +L G+ EK ER+IG EAV+ VA++VLR+R
Sbjct: 535 EEVSEEEIANIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVADAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQIIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ T+ + AR+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSGHLLEGLQEDGTIKEEARNLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RL +R + + +T+ A + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLIDRHITVELTEVAKEFVVESGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV VQ
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVQ 866
>gi|386360004|ref|YP_006058249.1| ATP-dependent chaperone ClpB [Thermus thermophilus JL-18]
gi|383509031|gb|AFH38463.1| ATP-dependent chaperone ClpB [Thermus thermophilus JL-18]
Length = 854
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/866 (52%), Positives = 610/866 (70%), Gaps = 34/866 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MN +++T EA+A A LA H HL LL D G+ + + AG + A
Sbjct: 1 MNLERWTQAAREALAQAQVLAQRMKHQAIDLPHLWAVLLKDEGGLAWRLLEKAGADPKAL 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
++ ER + +LP A ++ L + RA+A + D ++AVD L+L L
Sbjct: 61 KEAQER----ELSRLPKVEGAEVGQYLTSRLSGALNRAEALMEELKDRYVAVDTLVLALS 116
Query: 119 EDSQIGDLFKEAGV-AVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
E + G+ + +K +++LRG G+ V++ ++T+ AL+ YG DL + A
Sbjct: 117 EAT--------PGLPGLETLKKALQELRG--GKTVQTEHAESTYNALEQYGIDLTKLAAE 166
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRRV++IL RRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L
Sbjct: 167 GKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKG 226
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
R+++L MG+L+AGAKYRGEFEERLKAV++EV +++G+VILFIDE+H V+GAG+ EG++D
Sbjct: 227 KRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVIQSQGEVILFIDELHTVVGAGKAEGAVD 286
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KP LARG+LR IGATTL+EYR+ +EKD A ERRFQ VYV EP+V +T+SILRGLK
Sbjct: 287 AGNMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTVEETISILRGLK 345
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D A++ AA LS RYIT R LPDKAIDL+DEA A +R+ L+S PEEID
Sbjct: 346 EKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDA 405
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
LERK++QLEIE AL+KEKD S+ RL + E+ L +++ L ++KE+E + ++R
Sbjct: 406 LERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEKEREILRKLRE 465
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
+ + +E+ ++ AER+YDL RAA+LRYG + ++EA + L + E D
Sbjct: 466 AQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEED 525
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
IAE+VSRWTGIPV +L + E+ +R++G EA+ AVA+++ R+RAGL P
Sbjct: 526 -IAEIVSRWTGIPVAKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDP 584
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAK LA LFD E ++RIDM+EYME+H+VSRLIGAPPGYV
Sbjct: 585 NRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYV 644
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTD GRTVDFRNTVI
Sbjct: 645 GYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVI 704
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSNLG+ +L G+ + RD+V + +++HFRPE LNRLDEIVVF PL+ EQ+R+
Sbjct: 705 ILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQ 764
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+ + RLAE+ ++L +T+AA D + YDP++GARP+RR +++++ T L++ +
Sbjct: 765 IVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKI 824
Query: 825 VREEIDENSTVYIDASPKGDNLVYRV 850
+ E+ E V +D P G LV+ V
Sbjct: 825 LAGEVKEGDRVQVDVGPAG--LVFTV 848
>gi|373107282|ref|ZP_09521581.1| ATP-dependent chaperone ClpB [Stomatobaculum longum]
gi|371651112|gb|EHO16546.1| ATP-dependent chaperone ClpB [Stomatobaculum longum]
Length = 866
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/843 (53%), Positives = 595/843 (70%), Gaps = 24/843 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN KFT K+ EAIA A +LA+ G+ Q HL ALL+ + A + G + A
Sbjct: 1 MNISKFTQKSQEAIAAAEKLASQNGNQQIDEEHLLSALLTVSDSLIASLVAKMGIQKEAF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E ++KLP + E S L + + A+ KA GD +++V+ L L LL++
Sbjct: 61 LDES--EALIQKLPKVSGGGQEY-VSADLNRALNGAEDEAKAMGDDYVSVEHLFLSLLKN 117
Query: 121 SQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ +LF+ G+ + + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 118 PNRALKELFRTYGITREKFLQALSTVRGNQ--RVTSDNPEATYDTLNKYGYDLVERARDQ 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
+LDPVIGRDEEIR +RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L D
Sbjct: 176 ELDPVIGRDEEIRNAIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLKDK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL ALDMGALVAGAKYRGEFEERLKAVL+EV+++EG+VILFIDE+H ++GAG +EGSMDA
Sbjct: 236 RLFALDMGALVAGAKYRGEFEERLKAVLEEVKKSEGEVILFIDELHTIVGAGASEGSMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ + V +P+V DT+SILRGLKE
Sbjct: 296 GNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPILVDQPTVEDTISILRGLKE 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE +H V+IQD ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LDS P E+D +
Sbjct: 356 RYENYHHVKIQDGALVSAAVLSDRYITDRFLPDKAIDLVDEACAMIKTELDSLPAELDEM 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
R+RMQLEIE AL KE D SK RL + KEL + + +++ EK + ++ +
Sbjct: 416 NRRRMQLEIEATALRKETDNLSKERLEAIEKELAEKKAAFAEAKAKWENEKASVSKLAEI 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+Q+ E+ +Q A++ YDL +AA+L+YG + E++ + E ++ L E V +
Sbjct: 476 RQQIEDTNHEIQAAQQAYDLNKAAELQYGKLPELQKQLAAEEAKVQGQDFSLVHEAVTEN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA+++SRWT IPV +L ++EK +R+IG EAV VAE++ RS+AG+ P
Sbjct: 536 EIAKIISRWTNIPVAKLTESEKNKTLHLDDTLHQRVIGQDEAVEKVAEAIQRSKAGIKDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAK+LA LFDDE+ +VR+DMSEYME+ SVSRLIGAPPGYV
Sbjct: 596 SKPIGSFLFLGPTGVGKTELAKSLAAALFDDESAMVRLDMSEYMEKFSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD G+TVDF+NT+I
Sbjct: 656 GYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSLGKTVDFKNTII 715
Query: 705 IMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSNLG+++LL G+ G + + A V +V+ HFRPE LNRLDEI++F PL+ + +
Sbjct: 716 IMTSNLGSQYLLDGIDEQGNIKPEAAA-AVDADVKAHFRPEFLNRLDEIIMFKPLTKQNI 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ L +++ RLA++ +++ +T AA V E YDP +GARP++R+L+K V T ++
Sbjct: 775 GGIVDLLLQETNERLADQEISIELTPAAKQYVADEGYDPAFGARPLKRFLQKHVETLAAK 834
Query: 823 MLV 825
+++
Sbjct: 835 LIL 837
>gi|196037284|ref|ZP_03104595.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus NVH0597-99]
gi|228913847|ref|ZP_04077472.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228944880|ref|ZP_04107243.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|196031526|gb|EDX70122.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus NVH0597-99]
gi|228814908|gb|EEM61166.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228845786|gb|EEM90812.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 866
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/874 (52%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHNHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IAE+VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIAEIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|448821400|ref|YP_007414562.1| Chaperone protein ClpB [Lactobacillus plantarum ZJ316]
gi|448274897|gb|AGE39416.1| Chaperone protein ClpB [Lactobacillus plantarum ZJ316]
Length = 867
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/880 (51%), Positives = 615/880 (69%), Gaps = 47/880 (5%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP++FT +A+ A ++A + H + HL L+ P + Q + AG +
Sbjct: 1 MNPEQFTESLQQALQQAQQIAQTRRHQEIGVPHL-FKFLTQPGELVRQIFSEAGAD---- 55
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA------------STTLIKVIRRAQAAQKAHGDTHL 108
+Q +L + D+I S++L +++ A A +KA GD +L
Sbjct: 56 -----LDQLQTELDREL---DDIAVVSGGNVQYGGSMSSSLATLMQAADAKRKALGDDYL 107
Query: 109 AVDQLILGLLEDS--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKT 166
A D L L L++ + Q+ + G+ +VK+ V+++RG G++V S + + +QAL+
Sbjct: 108 ATDTLALALMDQTGDQLTKYLNQQGITAGQVKNAVDRIRG--GQRVTSRNQEDQYQALEK 165
Query: 167 YGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRI 224
YG DLV+QA G DPVIGRDEEI V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRI
Sbjct: 166 YGVDLVKQARQGNQDPVIGRDEEILDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRI 225
Query: 225 VRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLV 284
VRGDVP NL D L +LDMG+L+AGAKYRGEFEERLKAVLKE+++++G++I+FIDEIH +
Sbjct: 226 VRGDVPENLKDKTLFSLDMGSLIAGAKYRGEFEERLKAVLKEIKKSDGQIIMFIDEIHNI 285
Query: 285 LGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV 344
+GAG+TEGSMDA NL KPMLARG+L IGATTL+EYR+Y+EKD A ERRFQ+V VAEPSV
Sbjct: 286 VGAGKTEGSMDAGNLLKPMLARGELHLIGATTLDEYRQYMEKDKALERRFQKVLVAEPSV 345
Query: 345 PDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRV 404
DT+SILRGLKE++E HHGVRI D ALV AA+LS RYIT R+LPDKA+DLVDEA A +RV
Sbjct: 346 EDTISILRGLKERFEIHHGVRIHDNALVAAAKLSDRYITDRYLPDKALDLVDEASAEIRV 405
Query: 405 QLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYK 464
+++S P E+D + R+ M+LE+E AL+ E D AS RL +V+KEL ++K + L R+
Sbjct: 406 EMNSNPTELDQVNRQLMRLEVEEAALKNETDDASVKRLADVQKELASAKEKQRALSERWD 465
Query: 465 KEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE 524
EK+ + + K ++ L+ AE YDL +AA L++G I ++E + +E N E
Sbjct: 466 SEKKSLQALSDKKSALDKAKHDLENAENNYDLEQAAKLQHGTIPKLEQELKAMEANDHHE 525
Query: 525 NLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAES 573
+ ++ E+V PDQIA VVSR TGIPV +L E+E+L+ LA+ AV+AV+++
Sbjct: 526 DWLVEESVTPDQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDA 585
Query: 574 VLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV 633
VLRSRAGL P +P GSF+FLGPTGVGKTELAKALAE LFD ++ +VRIDMSEYME+ SV
Sbjct: 586 VLRSRAGLQDPNRPLGSFMFLGPTGVGKTELAKALAENLFDADDHMVRIDMSEYMEKESV 645
Query: 634 SRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQ 693
SRL+GA PGYVG+EEGGQLTEAVRR PYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQ
Sbjct: 646 SRLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTDGQ 705
Query: 694 GRTVDFRNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEI 751
GRTVDF+NT++IMTSNLG+E LL+G+ G ++ + QV+Q V+ F+PE LNR+D+I
Sbjct: 706 GRTVDFKNTILIMTSNLGSELLLAGVDDQGHLSADTHQ-QVMQLVQSRFKPEFLNRIDDI 764
Query: 752 VVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRW 811
++F PL + ++ + ++ RL +R + L ++D A + + Y+P YGARP+RR+
Sbjct: 765 IMFTPLQLGAIEEIVVKLIDRLSARLQDREITLKISDEAKKWIAKQGYEPAYGARPLRRF 824
Query: 812 LEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+ V T L++ ++ + STV I+ D+LV+ Q
Sbjct: 825 ITNHVETPLAKEIIAGRVAPKSTVAINLM--DDHLVFENQ 862
>gi|327399240|ref|YP_004340109.1| ATP-dependent chaperone ClpB [Hippea maritima DSM 10411]
gi|327181869|gb|AEA34050.1| ATP-dependent chaperone ClpB [Hippea maritima DSM 10411]
Length = 868
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/878 (51%), Positives = 615/878 (70%), Gaps = 41/878 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T K+ EA+ A ++A S + + LHL A++SD + + G + +A
Sbjct: 1 MDINKLTVKSQEALQTAKQIAESHKNQEIGSLHLLRAIISDSESVAVSILKKLGVDISA- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTT--------LIKVIRRAQAAQKAHGDTHLAVDQ 112
F L + P EI ST+ L V +RA+ + D +++V+
Sbjct: 60 -----FTSYTDSLIEKIPKV-EIAGSTSTQFYITKELDDVFKRAEEQMRLMEDEYISVEH 113
Query: 113 LILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLV 172
++ L E ++FK GV + + +RG G +V + + ++ALK YGRD+
Sbjct: 114 FLIALSEKCDASEVFKHFGVKKDELLKALVDIRG--GVRVTDQNPEEKYEALKKYGRDIT 171
Query: 173 E--QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP 230
E ++GKLDPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRI +GDVP
Sbjct: 172 ELAKSGKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIAKGDVP 231
Query: 231 SNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT 290
+L D LI LD+GAL+AGAK+RGEFEERLKAVL EV+ +EG++ILFIDE+H V+GAG
Sbjct: 232 ESLKDKTLIELDLGALIAGAKFRGEFEERLKAVLNEVKRSEGRIILFIDELHTVVGAGSA 291
Query: 291 EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSI 350
EGSMDA+N+ KPMLARG+LRCIGATTL+EYRKY+EKDAA +RRFQ V+V EP+V DT+SI
Sbjct: 292 EGSMDASNMLKPMLARGELRCIGATTLKEYRKYIEKDAALQRRFQPVFVKEPTVEDTISI 351
Query: 351 LRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQP 410
LRGLKEKYE HHGVRI+D ALV AA LS RYIT R LPDKAIDL+DEA A+++ QL+S
Sbjct: 352 LRGLKEKYELHHGVRIKDSALVAAAVLSHRYITDRFLPDKAIDLIDEAAASLKTQLESDI 411
Query: 411 EEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERI 470
E IDNL RK QLEIE AL+KE D+ SK RL E+ KEL L+++L + +++ EK I
Sbjct: 412 EPIDNLNRKIAQLEIERQALKKENDEDSKKRLEELEKELSQLKEQLNQIRAKWQYEKGLI 471
Query: 471 DEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI--GQLEGNQSDENLML 528
++IR +K+K +++ ++ AER D +A+ L+YG + +++ I Q E N S EN +L
Sbjct: 472 EDIRTIKEKLDKIKTQIEIAERNGDFEKASVLKYGELPKLQKEIEEKQKELN-SIENRLL 530
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRS 577
E V +++A +VSRWTGIPV+++ ++EKE+L +G AV AV+E++LRS
Sbjct: 531 KEEVTEEEVAAIVSRWTGIPVSKMLESEKEKLLKMEDKLKERVVGQDHAVKAVSEAILRS 590
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGL +P SF+FLGPTGVGKTEL+KALA+ LFDDE ++RIDMSEYME+ SVSRLI
Sbjct: 591 RAGLSDKNRPIASFIFLGPTGVGKTELSKALAKYLFDDERAIIRIDMSEYMEKFSVSRLI 650
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQVLDDGRLTD +G TV
Sbjct: 651 GAPPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGVTV 710
Query: 698 DFRNTVIIMTSNLGAEHL--LSGMMG----KVTMQVARDQVLQEVRKHFRPELLNRLDEI 751
DFRNTVIIMTSN+G+E+L + G G K+ + A +V E+++ F+PE LNR+DEI
Sbjct: 711 DFRNTVIIMTSNIGSEYLTRIKGEPGTEGYKLEFEKAVAEVNAELKRRFKPEFLNRVDEI 770
Query: 752 VVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRW 811
+VF+PL +++++ RL +K +L E G L V+D ++ + E +DP+YGARP+RR+
Sbjct: 771 IVFNPLGRNEIKQIVRLLLKKTQQKLQENGYELEVSDRLVERIADEGFDPVYGARPLRRY 830
Query: 812 LEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
++ ++ L++ ++ + + + D +G+ +V+R
Sbjct: 831 IQNRLENALAKAILEGKFVKGDKIIADY--EGNEIVFR 866
>gi|189460390|ref|ZP_03009175.1| hypothetical protein BACCOP_01029 [Bacteroides coprocola DSM 17136]
gi|189432942|gb|EDV01927.1| ATP-dependent chaperone protein ClpB [Bacteroides coprocola DSM
17136]
Length = 862
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/877 (50%), Positives = 616/877 (70%), Gaps = 44/877 (5%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLS---DPSGIFAQAINNAGGEN 57
MN + FT K+ EA+ A L S G P HL +L + + Q + G
Sbjct: 1 MNFNNFTIKSQEAVQQAVNLVQSRGQQAIEPEHLLAGVLKVGENVTNFIFQKLGING--- 57
Query: 58 AAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
Q E V ++ + LP + E S +V+++A K+ GD +++++ +IL L
Sbjct: 58 --QQIETVLDKQIASLPKVSGG--EPYLSRDANEVLQKAVELSKSLGDEYVSLEAIILAL 113
Query: 118 LE-DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
L S + + K+AGV +++ + +LR +G+ V S S + T+Q+L Y +L+E A
Sbjct: 114 LNVKSTVSTILKDAGVTDKELRAAISELR--QGQNVTSQSSEDTYQSLSKYAINLIEAAR 171
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPG GKTA+VEGLAQRI+RGDVP NL
Sbjct: 172 NGKLDPVIGRDEEIRRVLQILSRRTKNNPVLIGEPGTGKTAIVEGLAQRILRGDVPENLK 231
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ +L +LDMGALVAGAKY+GEFEERLK+V+ EV +++G +ILFIDEIH ++GAG+ EG+M
Sbjct: 232 NKQLFSLDMGALVAGAKYKGEFEERLKSVINEVTKSDGNIILFIDEIHTLVGAGKGEGAM 291
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DAAN+ KP LARG+LR IGATTL+EY+KY EKD A ERRFQ V V EP ++SILRGL
Sbjct: 292 DAANILKPALARGELRSIGATTLDEYQKYFEKDKALERRFQTVMVDEPDTASSISILRGL 351
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HH VRI+D A++ A +LS RYIT R LPDKAIDL+DEA A +R++ DS PEE+D
Sbjct: 352 KERYENHHQVRIKDEAIIAAVELSNRYITDRFLPDKAIDLMDEAAAKLRMERDSLPEELD 411
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ER+ QLEIE A+++EKD +A+L ++ KE+ +L+++ +++ EKE +++I+
Sbjct: 412 EIERRLKQLEIEREAIKREKD---EAKLAQLNKEIAELKEQETSYKAKWQSEKELVNKIQ 468
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN---QSDENLMLTET 531
+ K++ E+L F +AER D + A++RYG +Q +E I ++ + + +N M+ E
Sbjct: 469 QNKKEIEQLKFEADKAEREGDYGKVAEIRYGKLQSLENEIKSIQEDLKKKQGDNAMIKEE 528
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V + IA+VVSRWTGIPV+++ Q+E+++L IG EA+ AVA++V RSRAG
Sbjct: 529 VTAEDIADVVSRWTGIPVSKMLQSERDKLLHLEDELHKRVIGQDEAIEAVADAVRRSRAG 588
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSF+FLG TGVGKTELAKALAE LFDDE+L+ RIDMSEY E+H+VSRLIGAP
Sbjct: 589 LQDPKRPIGSFIFLGTTGVGKTELAKALAEYLFDDESLMTRIDMSEYQEKHTVSRLIGAP 648
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGRLTD +GRTV+F+
Sbjct: 649 PGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFK 708
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQE--------VRKHFRPELLNRLDEIV 752
NT+IIMTSNLG+ ++ S K+ Q DQV++E ++K RPE LNR+DE +
Sbjct: 709 NTIIIMTSNLGSSYIQS-QFEKINDQ-NHDQVVEETKAEVMNMLKKTIRPEFLNRIDETI 766
Query: 753 VFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWL 812
+F PL+ ++ ++ RLQ+ + L E GV L ++D A+D + YDP +GARP++R +
Sbjct: 767 MFQPLNKNEIEQIVRLQINGIKKMLEENGVTLQMSDQAVDFIATAGYDPEFGARPVKRAI 826
Query: 813 EKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
++ ++ +LS+ L+ +E+D + ++ S +G L++R
Sbjct: 827 QRYLLNDLSKKLLSQEVDRTKPIIVERSSEG--LIFR 861
>gi|311029392|ref|ZP_07707482.1| Class III stress response-related ATPase [Bacillus sp. m3-13]
Length = 864
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/861 (50%), Positives = 610/861 (70%), Gaps = 31/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN ++ T K EAI MA LA H Q HL +ALL G+ + + + Q
Sbjct: 1 MNINQMTTKLQEAIVMAKSLAEKMNHQQIEQEHLLLALLQQYEGLTERVLQKLKID--TQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ + +K P + A + S L + ++A + D +L+++ ++L L
Sbjct: 59 ALQLDLKTLLKSKPEVSGATSDAYISNQLNQTFKKADEWKTEWEDDYLSIEHILLALFHH 118
Query: 121 S----QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ Q+ L + AR+K ++++RG ++V S ++T++ALK YGRDL+E+
Sbjct: 119 NSTTYQLKKLSNTYNLNEARLKQAIQEIRG--NQRVTSKEPESTYEALKKYGRDLIEEVK 176
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD+EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 177 SGKLDPVIGRDQEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPDGLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + +LD+ +LVAGAKYRGEFEERLKAVL E+++++G+++LFIDE+H ++GAG+TEGSM
Sbjct: 237 DKTIFSLDLSSLVAGAKYRGEFEERLKAVLHEIKKSDGQILLFIDELHTIVGAGKTEGSM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL E+R+Y+EKD A ERRFQQV V EP+V DT+SILRGL
Sbjct: 297 DAGNMLKPMLARGELHCIGATTLNEHRQYIEKDPALERRFQQVLVQEPTVEDTISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I DRA+V AA LS RYI+ R LPDKAIDLVDEACA +R ++DS P E+D
Sbjct: 357 KERFEIHHGVNIHDRAIVSAAVLSNRYISERFLPDKAIDLVDEACAMIRTEIDSMPSELD 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ MQLEIE AL++EKD+AS RL ++++EL +L++ + +++ EK D+I+
Sbjct: 417 EVTRRVMQLEIEEAALKQEKDQASMERLTQLQQELANLKETSSAMKAQWQLEK---DDIQ 473
Query: 475 RLKQKREELLFA---LQEAERRYDLARAADLRYGAI---QEVEAAIGQLEGNQSDENLML 528
++ KREEL + L AE YDL +AA+LR+G I ++ + + + N +L
Sbjct: 474 LVRVKREELEKSKRDLATAENNYDLNKAAELRHGKIPSLEKELLQLEEKAKQKKQSNQLL 533
Query: 529 TETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRS 577
E V ++IA +V++WTGIPVT+L G+ EK ER++G EAV V+E+V+R+
Sbjct: 534 REEVTEEEIAGIVAKWTGIPVTKLVEGEREKLLKLEEILHERVVGQEEAVQLVSEAVIRA 593
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAG+ P +P GSF+FLGPTGVGKTELA+ALA+ LFD E ++RIDMSEYME+H+VSRLI
Sbjct: 594 RAGIKDPNRPIGSFIFLGPTGVGKTELARALAQSLFDSEEQIIRIDMSEYMEKHAVSRLI 653
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+EEGGQLTEAVRR+PYSV+L DEVEKAH VFN LLQ+LDDGR+TD QG+TV
Sbjct: 654 GAPPGYVGYEEGGQLTEAVRRKPYSVILLDEVEKAHPEVFNILLQMLDDGRITDSQGKTV 713
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+NTVIIMTSN+G+ H+L G+ + +++V+ ++R HFRPELLNR+D+ V+F PL
Sbjct: 714 DFKNTVIIMTSNIGS-HILLEHAGEELTEDTKEKVILQLRSHFRPELLNRIDDTVIFSPL 772
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
S ++ + +KD+ RL ++ + LA+++ A + +YDP++GARP++R+++K +
Sbjct: 773 SKSEIGLIVEKLIKDLQKRLEDKHLTLALSEEAKRFIADSAYDPVFGARPLKRFIQKHIE 832
Query: 818 TELSRMLVREEIDENSTVYID 838
T +++ +++ I + + I+
Sbjct: 833 TLIAKEIIKGSIQDFQEIIIE 853
>gi|153813859|ref|ZP_01966527.1| hypothetical protein RUMTOR_00065 [Ruminococcus torques ATCC 27756]
gi|331088187|ref|ZP_08337107.1| chaperone ClpB [Lachnospiraceae bacterium 3_1_46FAA]
gi|145848255|gb|EDK25173.1| ATP-dependent chaperone protein ClpB [Ruminococcus torques ATCC
27756]
gi|330408843|gb|EGG88306.1| chaperone ClpB [Lachnospiraceae bacterium 3_1_46FAA]
Length = 870
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/857 (51%), Positives = 607/857 (70%), Gaps = 25/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN ++FT + +A+ ++A G+ + HL ALL+ + + + Q
Sbjct: 1 MNINRFTQNSIQAVQNCEKIAADNGNQELAQEHLLYALLTQDDSLILKLFEKMNIQ--GQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
+QA+ K P ++ L V+ A+ K GD +++V+ L L LL+
Sbjct: 59 LLINRVDQAIGKRPKVQGG--QLFVGQDLNNVLIHAEDEAKQMGDEYVSVEHLFLSLLKY 116
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
++ +++E G++ + +RG + +V S + T+ L YG+DLVE+A
Sbjct: 117 ASKEMKQIYREFGISREGFLHALSTVRGNQ--RVTSDHPEATYDTLNKYGQDLVERARDQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP L D
Sbjct: 175 KLDPVIGRDEEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVSGDVPEGLKDK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+ +LDMGALVAGAKYRGEFEERLKAVL+EV+ ++GK+ILFIDE+H ++GAG+++G+MDA
Sbjct: 235 TIFSLDMGALVAGAKYRGEFEERLKAVLEEVKNSDGKIILFIDELHTIVGAGKSDGAMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V D +SILRGLKE
Sbjct: 295 GNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVLVDEPTVEDAISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D L
Sbjct: 355 RYEVFHGVKITDSALVAAAMLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELDEL 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
R+ MQLEIE AL+KE+D+ S+ RL +++EL L+++ ++++ EK ++ ++++
Sbjct: 415 RRRIMQLEIEEEALKKEEDRLSRERLEHLQEELAGLKEEYAGEKVQWENEKHSVERVQKI 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGPD 535
+++ E + + +A+R YDL +AA L+YG + +++ + + E ++ L L E V +
Sbjct: 475 REEIEHVNKEISKAQREYDLNKAAQLQYGELPQLQKQLEEEEEKVREKELSLVHEAVTDE 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
+IA +VSRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+ P
Sbjct: 535 EIARIVSRWTGIPVAKLNESERNKTLHLADELHKRVIGQDEGVELVTEAIIRSKAGIKDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAKALA+ LFDDEN +VRIDMSEYME++SVSRLIGAPPGYV
Sbjct: 595 SKPIGSFLFLGPTGVGKTELAKALAQSLFDDENNMVRIDMSEYMEKYSVSRLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQVLDDGR+TD QGRTVDF+NT++
Sbjct: 655 GYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTIL 714
Query: 705 IMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
IMTSN+GA +LL G+ G ++ + A+D + ++R HFRPE LNRLDEI++F PL+ E +
Sbjct: 715 IMTSNIGAGYLLDGIKEDGSISKE-AQDMAMNDLRAHFRPEFLNRLDEIIMFKPLTKENI 773
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
R + L + DV RL E+ + + +T+AA D ++ YDP+YGARP++R+L+K V T +R
Sbjct: 774 RAIIDLLVADVNRRLEEKELTIELTEAAKDCIVEGGYDPMYGARPLKRYLQKNVETLAAR 833
Query: 823 MLVREEIDENSTVYIDA 839
+++ + T+ IDA
Sbjct: 834 LILAGNVGREDTILIDA 850
>gi|441472020|emb|CCQ21775.1| Chaperone protein ClpB [Listeria monocytogenes]
gi|441475157|emb|CCQ24911.1| Chaperone protein ClpB [Listeria monocytogenes N53-1]
Length = 866
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/864 (50%), Positives = 616/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + H+ LL++ FA+ + + E
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESD--FAKRVYDVA-EVDTD 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++V ++K+P S + S L +++R A+ Q+ D ++ + LIL ++
Sbjct: 58 ALQKVIENTLEKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQQQLEDDFVSTEHLILAVM 117
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K A ++K + K+RG G++V S + + ++AL YGRDLV +
Sbjct: 118 DQKSNPITAELKNQHKAKKQIKEAILKIRG--GKRVTSQNAEENYEALTKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEILQRELADYKEEANQMKSKWESEKNEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I V + + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGRIPAVEKELLELEAENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVQLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGY+G+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYIGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQNEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEITITISDDAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID + K
Sbjct: 835 PLAREIVSGKIMPHSSVEIDLADK 858
>gi|114328467|ref|YP_745624.1| clpB protein [Granulibacter bethesdensis CGDNIH1]
gi|114316641|gb|ABI62701.1| clpB protein [Granulibacter bethesdensis CGDNIH1]
Length = 865
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/862 (52%), Positives = 603/862 (69%), Gaps = 26/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT ++ + A +A H + HL ALL D G A + AGG+
Sbjct: 1 MDIEKFTERSRGFLQAAQTIAAREFHQRLGTEHLLKALLDDEEGAAAGLVRTAGGD--PD 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-L 118
A R + ++P Q + A+ LI+ + A+ A K GD ++A D+L+ GL L
Sbjct: 59 EARRAVEAEIARVPKVQGAGAGQPQATPDLIRALDAAEQAAKKAGDEYVAQDRLLQGLAL 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
D + KEA V ++ + +LR +GR V S + + TF ALK Y RD+ + A G
Sbjct: 119 ADGPASRILKEAKVTPQALERAIGELR--KGRTVSSQNAEATFDALKKYARDVTQLARDG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR V++L+RRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP L +
Sbjct: 177 KLDPVIGRDEEIRRTVQVLARRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEALRNK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALD+GA+VAGAK+RGEFEERLKAVLKE+E A G+VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 KLLALDLGAMVAGAKFRGEFEERLKAVLKEIESANGEVILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG L CIGATTL+EYRK+VEKDAA RRFQ VYV EPSV DT+SILRG+KE
Sbjct: 297 SNLLKPELARGALHCIGATTLDEYRKHVEKDAALARRFQPVYVEEPSVEDTISILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D AL+ AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PE +D L
Sbjct: 357 KYELHHGVRITDSALIAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEALDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL++E D+ +K RL ++KEL +L +K L ++ EK+R+ E ++L
Sbjct: 417 DRRILQLKIEREALKREDDQGAKERLERLQKELAELEEKSFALTTEWRAEKDRVSESQKL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE----GNQSDENLMLTETV 532
K++ ++ ++ A+RR DL RA++L YG I +++A + + E GN ++++ V
Sbjct: 477 KEQLDQARNEVEVAQRRGDLQRASELLYGTIPDLQAKLSEAENAAHGNAGSR--LVSQAV 534
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGL 581
+QIA VVSRWTG+PV R+ + E ++R++G +A+ AVA +V R+RAGL
Sbjct: 535 TDEQIAAVVSRWTGVPVDRMLEGERAKLMRMEDELRQRVVGQEDALRAVANAVRRARAGL 594
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTEL KALAE LFDD+ +VRIDMSE+ME+H+VSRLIGAPP
Sbjct: 595 QDPNRPIGSFLFLGPTGVGKTELTKALAEFLFDDDRAMVRIDMSEFMEKHAVSRLIGAPP 654
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRN
Sbjct: 655 GYVGYDEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGRTVDFRN 714
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+I++TSN+G+E L + G+ T V QV+Q VR FRPE LNRLDEIV+F L +
Sbjct: 715 TIIVLTSNMGSEILAAQADGEDTSLVY-GQVMQVVRARFRPEFLNRLDEIVLFRRLQRQD 773
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + +Q+ + LA+R + L + A D + E YDP+YGARP++R +++ + L+
Sbjct: 774 MASIVDIQLGRLRSLLADRKITLKLDSLAQDWLANEGYDPVYGARPLKRVIQRSLQNPLA 833
Query: 822 RMLVREEIDENSTVYIDASPKG 843
+++ EI + TV + A G
Sbjct: 834 GLILEGEIQDGQTVQVSAGADG 855
>gi|115453619|ref|NP_001050410.1| Os03g0426900 [Oryza sativa Japonica Group]
gi|75137428|sp|Q75GT3.1|CLPB2_ORYSJ RecName: Full=Chaperone protein ClpB2, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpB
homolog 2; AltName: Full=Casein lytic proteinase B2;
Flags: Precursor
gi|41469357|gb|AAS07199.1| putative heat shock protein [Oryza sativa Japonica Group]
gi|108708928|gb|ABF96723.1| Chaperone clpB 1, putative, expressed [Oryza sativa Japonica Group]
gi|113548881|dbj|BAF12324.1| Os03g0426900 [Oryza sativa Japonica Group]
gi|215697274|dbj|BAG91268.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 978
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/860 (50%), Positives = 603/860 (70%), Gaps = 32/860 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT ++I + E+A + H HL +LL +G+ + + AG +N R
Sbjct: 88 EFTEMAWQSIVSSPEVAKESKHQIVETEHLMKSLLEQRNGLARRIFSKAGVDNT-----R 142
Query: 65 VFNQAMKKLPSQTPAPDEIPAST---TLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ + K + Q E P S L +I+RA+ +K +GD+ ++V+ L+LG ED
Sbjct: 143 LLDATEKFIQRQPKVLGEDPGSMLGRDLEALIQRARDFKKEYGDSFVSVEHLVLGFAEDK 202
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LFK+ + V +K+ +E +RGK+ + G ++AL YG+DL A GKL
Sbjct: 203 RFGRQLFKDFQITVQSLKTAIESIRGKQNVIDQDPEG--KYEALDKYGKDLTAMARQGKL 260
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L + RL
Sbjct: 261 DPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPQALTNRRL 320
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFE+RLKAVLKEV +++G+ ILFIDEIH V+GAG T G+MDA N
Sbjct: 321 IALDMGALIAGAKYRGEFEDRLKAVLKEVTDSDGQTILFIDEIHTVVGAGATNGAMDAGN 380
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +PSV DT+SILRGL+E+Y
Sbjct: 381 LLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTISILRGLRERY 440
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDE+ A +++++ S+P +D ++R
Sbjct: 441 ELHHGVRISDSALVAAALLSDRYISGRFLPDKAIDLVDESAAKLKMEITSKPTALDEIDR 500
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
++LE+E +L + DKAS+ RL + EL L++K + L ++++EK + +I+ +K+
Sbjct: 501 AVIKLEMERLSLTNDTDKASRDRLSRIEAELSLLKEKQKDLTEQWEREKSVMTKIQSIKE 560
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG++ ++++ +L+ QS ML E V
Sbjct: 561 EIDRVNVEIQQAEREYDLNRAAELKYGSLNALQRQLQTTEKELDEYQSSGKSMLREEVTQ 620
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D IAE+VSRWTGIPV++L Q+++ +R++G AV AV+E++ RSRAGL
Sbjct: 621 DDIAEIVSRWTGIPVSKLKQSDREKLLYLEEELHKRVVGQDPAVKAVSEAIQRSRAGLSD 680
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+F+GPTGVGKTELAKALA +F+ E +VRIDMSEYME+HSVSRLIGAPPGY
Sbjct: 681 PNRPIASFMFMGPTGVGKTELAKALAAFMFNTEEAVVRIDMSEYMEKHSVSRLIGAPPGY 740
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRRRPYS++LFDE+EKAH VFN LQ+LDDGR+TD QGR V F N++
Sbjct: 741 VGYEEGGQLTEAVRRRPYSIILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRKVSFTNSI 800
Query: 704 IIMTSNLGAEHLLS----GMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
IIMTSN+G++ +L+ G + + +V+ R FRPE +NR+DE +VF PL
Sbjct: 801 IIMTSNVGSQFILNMDEEGGSTDSAYENIKKRVMDAARSVFRPEFMNRIDEYIVFKPLER 860
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
EQ+ + +LQ+ V R+A+R + L V+ A++ + + YDP YGARP++R +++ V E
Sbjct: 861 EQINSIVKLQLARVQKRIADRKIKLEVSPGAVEFLGSLGYDPNYGARPVKRVIQQYVENE 920
Query: 820 LSRMLVREEIDENSTVYIDA 839
L++ ++R + + ++ +D
Sbjct: 921 LAKGILRGDFKDEDSILVDT 940
>gi|217963632|ref|YP_002349310.1| ATP-dependent chaperone ClpB [Listeria monocytogenes HCC23]
gi|386008982|ref|YP_005927260.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes L99]
gi|386027595|ref|YP_005948371.1| Clp endopeptidase ATP-binding subunit [Listeria monocytogenes M7]
gi|404408647|ref|YP_006691362.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
gi|217332902|gb|ACK38696.1| ATP-dependent chaperone ClpB [Listeria monocytogenes HCC23]
gi|307571792|emb|CAR84971.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes L99]
gi|336024176|gb|AEH93313.1| Clp endopeptidase ATP-binding subunit [Listeria monocytogenes M7]
gi|404242796|emb|CBY64196.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC2376]
Length = 866
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/864 (50%), Positives = 614/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + H+ LL++ FA+ + + E
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESD--FAKRVYDVA-EVDID 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++ A+ K+P S + S L +++R A+ QK D ++ + LIL ++
Sbjct: 58 ALQKTVEDALTKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQKQLDDDFVSTEHLILAVM 117
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K + +++ + K+RG G+KV S + + ++AL YGRDLV +
Sbjct: 118 DQKSNPITMNLKNQHKSKKQIQEAILKIRG--GKKVTSQNAEENYEALTKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEILQRELADYKEEANQMKSKWESEKNEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I V + + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGKIPAVEKELLELEAENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADELHQKVIGQDDAVQLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYVGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEITITISDDAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID K
Sbjct: 835 PLAREIVSGKIMPHSSVEIDLEDK 858
>gi|254931681|ref|ZP_05265040.1| clpB protein [Listeria monocytogenes HPB2262]
gi|405750566|ref|YP_006674032.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|417318274|ref|ZP_12104863.1| clpB protein [Listeria monocytogenes J1-220]
gi|424823978|ref|ZP_18248991.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|293583236|gb|EFF95268.1| clpB protein [Listeria monocytogenes HPB2262]
gi|328472108|gb|EGF42983.1| clpB protein [Listeria monocytogenes J1-220]
gi|332312658|gb|EGJ25753.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|404219766|emb|CBY71130.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
Length = 866
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/864 (50%), Positives = 616/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + H+ LL++ FA+ + + E
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESD--FAKRVYDVA-EVDID 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++ A+ K+P S + S L +++R A+ QK D ++ + LIL ++
Sbjct: 58 ALQKTVEDALTKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQKQLDDDFVSTEHLILAVM 117
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K+ + +++ + K+RG G+KV S + + ++AL YGRDLV +
Sbjct: 118 DQKSNPITMNLKKQHKSKKQIQEAILKIRG--GKKVTSQNAEENYEALTKYGRDLVVEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEILQRELADYKEEANQMKSKWESEKNEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I V + + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGKIPAVEKELLELEAENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADELHQKVIGQDDAVQLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYVGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEITITISDNAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID + K
Sbjct: 835 PLAREIVSGKIMPHSSVEIDLADK 858
>gi|218193097|gb|EEC75524.1| hypothetical protein OsI_12134 [Oryza sativa Indica Group]
Length = 964
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/860 (50%), Positives = 603/860 (70%), Gaps = 32/860 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT ++I + E+A + H HL +LL +G+ + + AG +N R
Sbjct: 74 EFTEMAWQSIVSSPEVAKESKHQIVETEHLMKSLLEQRNGLARRIFSKAGVDNT-----R 128
Query: 65 VFNQAMKKLPSQTPAPDEIPASTT---LIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ + K + Q E P S L +I+RA+ +K +GD+ ++V+ L+LG ED
Sbjct: 129 LLDATEKFIQRQPKVLGEDPGSMLGRDLEALIQRARDFKKEYGDSFVSVEHLVLGFAEDK 188
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LFK+ + V +K+ +E +RGK+ + G ++AL YG+DL A GKL
Sbjct: 189 RFGRQLFKDFQITVQSLKTAIESIRGKQNVIDQDPEG--KYEALDKYGKDLTAMARQGKL 246
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L + RL
Sbjct: 247 DPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPQALTNRRL 306
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFE+RLKAVLKEV +++G+ ILFIDEIH V+GAG T G+MDA N
Sbjct: 307 IALDMGALIAGAKYRGEFEDRLKAVLKEVTDSDGQTILFIDEIHTVVGAGATNGAMDAGN 366
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +PSV DT+SILRGL+E+Y
Sbjct: 367 LLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTISILRGLRERY 426
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDE+ A +++++ S+P +D ++R
Sbjct: 427 ELHHGVRISDSALVAAALLSDRYISGRFLPDKAIDLVDESAAKLKMEITSKPTALDEIDR 486
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
++LE+E +L + DKAS+ RL + EL L++K + L ++++EK + +I+ +K+
Sbjct: 487 AVIKLEMERLSLTNDTDKASRDRLSRIEAELSLLKEKQKDLTEQWEREKSVMTKIQSIKE 546
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG++ ++++ +L+ QS ML E V
Sbjct: 547 EIDRVNVEIQQAEREYDLNRAAELKYGSLNALQRQLQTTEKELDEYQSSGKSMLREEVTQ 606
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D IAE+VSRWTGIPV++L Q+++ +R++G AV AV+E++ RSRAGL
Sbjct: 607 DDIAEIVSRWTGIPVSKLKQSDREKLLYLEEELHKRVVGQDPAVKAVSEAIQRSRAGLSD 666
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+F+GPTGVGKTELAKALA +F+ E +VRIDMSEYME+HSVSRLIGAPPGY
Sbjct: 667 PNRPIASFMFMGPTGVGKTELAKALAAFMFNTEEAVVRIDMSEYMEKHSVSRLIGAPPGY 726
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRRRPYS++LFDE+EKAH VFN LQ+LDDGR+TD QGR V F N++
Sbjct: 727 VGYEEGGQLTEAVRRRPYSIILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRKVSFTNSI 786
Query: 704 IIMTSNLGAEHLLS----GMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
IIMTSN+G++ +L+ G + + +V+ R FRPE +NR+DE +VF PL
Sbjct: 787 IIMTSNVGSQFILNMDEEGGSTDSAYENIKKRVMDAARSVFRPEFMNRIDEYIVFKPLER 846
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
EQ+ + +LQ+ V R+A+R + L V+ A++ + + YDP YGARP++R +++ V E
Sbjct: 847 EQINSIVKLQLARVQKRIADRKIKLEVSPGAVEFLGSLGYDPNYGARPVKRVIQQYVENE 906
Query: 820 LSRMLVREEIDENSTVYIDA 839
L++ ++R + + ++ +D
Sbjct: 907 LAKGILRGDFKDEDSILVDT 926
>gi|148658380|ref|YP_001278585.1| ATPase [Roseiflexus sp. RS-1]
gi|148570490|gb|ABQ92635.1| ATPase AAA-2 domain protein [Roseiflexus sp. RS-1]
Length = 871
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/869 (51%), Positives = 617/869 (71%), Gaps = 27/869 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAI---NNAGGEN 57
N ++ T K+ EA+ A A G++Q P HL +ALL G+ Q + N A G
Sbjct: 3 FNTNRLTQKSEEALLAAQSTAERNGNSQVEPEHLLLALLEQTDGVVPQVLARLNVAVGVL 62
Query: 58 AAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
Q + K P + A ++ S + V+ RA GD +++ + L+L +
Sbjct: 63 VQQ-----VRAEINKFPRISGAGVQLQYSPRMRNVVVRAADEMPQFGDEYISTEHLLLSI 117
Query: 118 LEDSQIG--DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
L+ + G + ++AG+ ++ + ++RG + +V S + + T+ AL+ YGRDL E A
Sbjct: 118 LQHAGGGAERILRQAGITRDKLLQALREVRGSQ--RVTSPTPEGTYAALEQYGRDLTELA 175
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 RRGKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVREDVPEAL 235
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ R+IALDMGAL+AGAKYRGEFEERLKAVLKE++E + +ILF+DE+H V+GAG EG+
Sbjct: 236 KNKRIIALDMGALIAGAKYRGEFEERLKAVLKEIQERD-DIILFVDELHTVVGAGAAEGA 294
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA+N+ KPMLARG+L +GATTL+EYRK++EKDAA ERRFQ V V PSV DT+SILRG
Sbjct: 295 MDASNMLKPMLARGELHMVGATTLDEYRKHIEKDAALERRFQPVMVDPPSVEDTISILRG 354
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE+YE HHGVRI D A+V AA LS RYI+ R LPDKAIDL+DEA A +R+++ S P+E+
Sbjct: 355 LKERYETHHGVRITDAAIVAAAVLSDRYISDRFLPDKAIDLIDEAAARLRMEITSDPQEL 414
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D+L+R+ MQLEIE AL+KEKDKASK RL ++ +EL +L+++ + + + ++E+E++ +
Sbjct: 415 DDLKRRIMQLEIEREALKKEKDKASKERLEKLEQELANLQEQRRAVEAQLQREREQLARV 474
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETV 532
++LK++ ++ ++ A+R YD +AA+L+YG + +E + ++E + ++ + ML + V
Sbjct: 475 QQLKEQIDQTRIEIERAQRVYDYNKAAELQYGRLNTLERQLAEIEEHMRASGSAMLRQEV 534
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGL 581
IAE+VS+WTGIPV+RL + E E R++G EAV+AVA +V R+RAGL
Sbjct: 535 TEQDIAEIVSKWTGIPVSRLLEGEIEKLVHMEERLHRRVVGQDEAVSAVANAVRRARAGL 594
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTELA+ALAE LFDDE ++RIDMSEYME+H+V+RLIGAPP
Sbjct: 595 QDPNRPLGSFLFLGPTGVGKTELARALAEFLFDDEQAMIRIDMSEYMEKHTVARLIGAPP 654
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQ+LDDGRLTDG GR V+F+N
Sbjct: 655 GYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHHDVFNILLQILDDGRLTDGHGRVVNFKN 714
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
TVIIMTSN+ + + + ++ R V++E+R RPE LNR+DEI+VF PLS +Q
Sbjct: 715 TVIIMTSNIASPTIQELAQRGASQEIIRASVMEELRAQLRPEFLNRIDEIIVFRPLSRDQ 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ +Q+ + LA+R + L ++ AA + ++AE YDP++GARP++R +++++ L+
Sbjct: 775 IGKIVDIQLNRLRKLLADRKITLDLSPAAREKLVAEGYDPVFGARPLKRVIQQRIQNPLA 834
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRV 850
L++ E + T+ ID + G RV
Sbjct: 835 LRLLQGEFRDGDTILIDVASDGSFTFERV 863
>gi|254556766|ref|YP_003063183.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
plantarum JDM1]
gi|254045693|gb|ACT62486.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
plantarum JDM1]
Length = 867
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/870 (51%), Positives = 614/870 (70%), Gaps = 27/870 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP++FT +A+ A ++A + H + HL L+ P + Q + AG +
Sbjct: 1 MNPEQFTESLQQALQQAQQIAQTRRHQEIGVPHL-FKFLTQPGELVRQIFSEAGADLGQL 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEI--PASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
E ++ + + + + S++L +++ A A +KA GD +LA D L L L+
Sbjct: 60 QTE--LDRELDDIAVVSGGNVQYGGSMSSSLATLMQAADAKRKALGDDYLATDTLALALM 117
Query: 119 EDS--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ + Q+ + G+ +VK+ V+++RG G++V S + + +QAL+ YG DLV+QA
Sbjct: 118 DQTGDQLTKYLNQQGITAGQVKNAVDRIRG--GQRVTSRNQEDQYQALEKYGVDLVKQAR 175
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
G DPVIGRDEEI V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP NL
Sbjct: 176 QGNQDPVIGRDEEILDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPENLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D L +LDMG+L+AGAKYRGEFEERLKAVLKE+++++G++I+FIDEIH ++GAG+TEGSM
Sbjct: 236 DKTLFSLDMGSLIAGAKYRGEFEERLKAVLKEIKKSDGQIIMFIDEIHNIVGAGKTEGSM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L IGATTL+EYR+Y+EKD A ERRFQ+V VAEPSV DT+SILRGL
Sbjct: 296 DAGNLLKPMLARGELHLIGATTLDEYRQYMEKDKALERRFQKVLVAEPSVEDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGVRI D ALV AA+LS RYIT R+LPDKA+DLVDEA A +RV+++S P E+D
Sbjct: 356 KERFEIHHGVRIHDNALVAAAKLSDRYITDRYLPDKALDLVDEASAEIRVEMNSNPTELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ M+LE+E AL+ E D AS RL +V+KEL ++K + L R+ EK+ + +
Sbjct: 416 QVNRQLMRLEVEEAALKNETDDASVKRLADVQKELASAKEKQRALSERWDSEKKSLQALS 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
K ++ L+ AE YDL +AA L++G I ++E + +E N E+ ++ E+V P
Sbjct: 476 DKKSALDKAKHDLENAENNYDLEQAAKLQHGTIPKLEQELKSMEANDHHEDWLVEESVTP 535
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGR 583
DQIA VVSR TGIPV +L E+E+L+ LA+ AV+AV+++VLRSRAGL
Sbjct: 536 DQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDAVLRSRAGLQD 595
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSF+FLGPTGVGKTELAKALAE LFD ++ +VRIDMSEYME+ SVSRL+GA PGY
Sbjct: 596 PNRPLGSFMFLGPTGVGKTELAKALAENLFDADDHMVRIDMSEYMEKESVSRLVGAAPGY 655
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR PYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+
Sbjct: 656 VGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTI 715
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSNLG+E LL+G+ G ++ + QV+Q V+ F+PE LNR+D+I++F PL
Sbjct: 716 LIMTSNLGSELLLAGVDDQGHLSADTHQ-QVMQLVQSRFKPEFLNRIDDIIMFTPLQLGA 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++ + ++ RL +R + L ++D A + + Y+P YGARP+RR++ V T L+
Sbjct: 775 IEEIVVKLIDRLSARLQDREITLKISDEAKKWIAKQGYEPAYGARPLRRFITNHVETPLA 834
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+ ++ + STV I+ D+LV+ Q
Sbjct: 835 KEIIVGRVAPKSTVAINL--MDDHLVFENQ 862
>gi|226224814|ref|YP_002758921.1| endopeptidase Clp ATP-binding chain B (ClpB) [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|225877276|emb|CAS05990.1| Putative endopeptidase Clp ATP-binding chain B (ClpB) [Listeria
monocytogenes serotype 4b str. CLIP 80459]
Length = 866
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/864 (50%), Positives = 616/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + H+ LL++ FA+ + + E
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESD--FAKRVYDVA-EVDID 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++ A+ K+P S + S L +++R A+ QK D ++ + LIL ++
Sbjct: 58 ALQKTVEDALTKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQKQLDDDFVSTEHLILAVM 117
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K+ + +++ + K+RG G+KV S + + ++AL YGRDLV +
Sbjct: 118 DQKSNPITMNLKKQHKSKKQIQEAILKIRG--GKKVTSQNAEENYEALTKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEILQRELADYKEEANQMKSKWESEKNEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I V + + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGKIPAVEKELLELEAENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADELHQKVIGQDDAVQLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR P+S+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYVGYEEGGQLTEAVRRNPFSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEITITISDNAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID + K
Sbjct: 835 PLAREIVSGKIMPHSSVEIDLADK 858
>gi|218902368|ref|YP_002450202.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus AH820]
gi|218537757|gb|ACK90155.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus AH820]
Length = 866
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/874 (52%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHNHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + ++++EKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEREKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IAE+VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIAEIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDSSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|357502203|ref|XP_003621390.1| Chaperone protein clpB [Medicago truncatula]
gi|355496405|gb|AES77608.1| Chaperone protein clpB [Medicago truncatula]
Length = 1034
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/861 (51%), Positives = 602/861 (69%), Gaps = 34/861 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT +AI + E+A H HL ALL +G+ + G +N
Sbjct: 143 EFTEMAWQAIVSSPEVAKENKHQIVETEHLMKALLEQKNGLARRIFTKVGVDNTQ----- 197
Query: 65 VFNQAMKKLPSQTPAPDEIPASTTLIK----VIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+A K + P A + L + +I+RA+ QK +GD+ ++V+ L+LG ++D
Sbjct: 198 -LLEATDKFIQRQPKVIGESAGSMLGRDLEGLIQRARDFQKEYGDSFVSVEHLVLGFIQD 256
Query: 121 SQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGK 177
+ G LFK+ ++ +KS +E +RG++ + G ++AL+ YG+DL + +AGK
Sbjct: 257 QRFGKQLFKDFQISQQGLKSAIESIRGRQSVIDQDPEG--KYEALEKYGKDLTAMAKAGK 314
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L + R
Sbjct: 315 LDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALMNRR 374
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
LI+LDMGAL+AGAKYRGEFE+RLKAVLKEV E++G+ ILFIDEIH V+GAG T G+MDA
Sbjct: 375 LISLDMGALIAGAKYRGEFEDRLKAVLKEVTESDGQTILFIDEIHTVVGAGATNGAMDAG 434
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +P+V DT+SILRGL+E+
Sbjct: 435 NLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTISILRGLRER 494
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDEA A +++++ S+P +D +
Sbjct: 495 YELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEIN 554
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R ++LE+E +L + DKASK RL + EL L+ K L +++ EK + ++ +K
Sbjct: 555 RSVLKLEMERLSLTNDTDKASKDRLSRLEAELSLLKHKQAELTEQWEHEKSVMTRLQSIK 614
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVG 533
++ + + +Q+AER YDL RAA+L+YG++ +++E+A +L+ + ML E V
Sbjct: 615 EEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLESAEKELDEYMNSGKSMLREEVT 674
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLG 582
IAE+VS+WTGIPV++L Q+E+E+L+ L E AV AVAE++ RSRAGL
Sbjct: 675 GSDIAEIVSKWTGIPVSKLQQSEREKLLYLEEVLHKRVVGQDPAVKAVAEAIQRSRAGLS 734
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P SF+F+GPTGVGKTELAK LA +F+ E LVRIDMSEYME+H+VSRLIGAPPG
Sbjct: 735 DPHRPIASFMFMGPTGVGKTELAKTLASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPG 794
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTE VRRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QGRTV F NT
Sbjct: 795 YVGYEEGGQLTETVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNT 854
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEV----RKHFRPELLNRLDEIVVFDPLS 758
VIIMTSN+G++++L+ ++A + + Q V R FRPE +NR+DE +VF PL
Sbjct: 855 VIIMTSNVGSQYILNTDDDTAPKELAYETIKQRVMDAARSIFRPEFMNRVDEYIVFQPLD 914
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
+Q+ + RLQ++ V R+ +R + + VTDAA+ ++ + YDP YGARP++R +++ V
Sbjct: 915 RDQISSIVRLQLERVQKRITDRKMKIQVTDAAIQLLGSLGYDPNYGARPVKRVIQQNVEN 974
Query: 819 ELSRMLVREEIDENSTVYIDA 839
EL++ ++R E + T+ +D
Sbjct: 975 ELAKGILRGEFKDEDTILVDT 995
>gi|423349309|ref|ZP_17326965.1| chaperone ClpB [Scardovia wiggsiae F0424]
gi|393702857|gb|EJD65059.1| chaperone ClpB [Scardovia wiggsiae F0424]
Length = 888
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/868 (51%), Positives = 603/868 (69%), Gaps = 40/868 (4%)
Query: 4 DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAE 63
+KFT EAI A + A++AG+ Q PLHL +LL G+ I +G + A+
Sbjct: 3 EKFTTMAQEAIGDAVQSASAAGNPQVGPLHLLDSLLRQDGGVVKGLIQASGADTQKIGAQ 62
Query: 64 RVFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE-DS 121
+A+ LPS + + P AS L KV+ A+ + GD +++ + L++ + + D
Sbjct: 63 --VRRALASLPSASGSSTAQPDASRQLAKVLSDARREMGSLGDEYISTEHLLIAIAQSDG 120
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ GD+ + AG ++ + ++RG G KV S + +++AL+ Y DL E+A GKLD
Sbjct: 121 EAGDILRSAGADAKALRKAIPEVRG--GAKVTSPDAEGSYKALEKYSIDLTERAREGKLD 178
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQR+V GDVP+ L + R+I
Sbjct: 179 PVIGRDAEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVAGDVPAGLQNRRII 238
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LDM ++VAG+KYRGEFEER+KAVL E+++++G +I FIDEIH ++GAG TEGSMDA N+
Sbjct: 239 SLDMSSMVAGSKYRGEFEERMKAVLNEIKKSDGNIITFIDEIHTIVGAGATEGSMDAGNM 298
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 299 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 358
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS+PEEID L+R+
Sbjct: 359 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSEPEEIDELQRR 418
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D AS+ RL +++ EL D R++L L R+ EK ++I L+ +
Sbjct: 419 VTRLEMEEMQLKKAEDAASRERLEKIQSELADTREQLAGLNSRWSAEKAGHNKIGDLRAQ 478
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEV------------------EAAIGQLEGNQ 521
+ L +A R DL A+ + YG I + EA EG
Sbjct: 479 LDALRVEADKATREGDLEHASKILYGQIPGIQKQLTEAESKADQHGGAAEAGSSGAEGGS 538
Query: 522 SDENLMLTETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAV 570
D M+ + V D +A +VS WTGIPV RL G+NEK +R+IG +AV AV
Sbjct: 539 PDTEPMVPDHVDADSVAAIVSSWTGIPVGRLMQGENEKLLHMEDELSKRVIGQQQAVQAV 598
Query: 571 AESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQ 630
+++V RSRAG+ P +PT SF+FLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+
Sbjct: 599 SDAVRRSRAGISDPDRPTASFMFLGPTGVGKTELAKALADFLFDDERAVVRIDMSEYMEK 658
Query: 631 HSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLT 690
SVSR+IGA PGY+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLT
Sbjct: 659 ASVSRMIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDILLQVLDDGRLT 718
Query: 691 DGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDE 750
DGQGRTVDF NT++IMTSNLG++ L+ MG + R V+ V +F+PE +NRLD+
Sbjct: 719 DGQGRTVDFTNTILIMTSNLGSQFLVD--MG-MDADARRKAVMDAVHMNFKPEFINRLDD 775
Query: 751 IVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRR 810
+++F+PL+ E+L K+ +Q++ VA RL +R + L VTD+A + YDP YGARP+RR
Sbjct: 776 LIIFNPLTREELGKIVNIQVEQVASRLTDRRITLDVTDSARQWLADTGYDPAYGARPLRR 835
Query: 811 WLEKKVVTELSRMLVREEIDENSTVYID 838
++ +V +L+RML+ ++ + TV +D
Sbjct: 836 LVQSEVGDKLARMLLAGQVHDGDTVLVD 863
>gi|228932547|ref|ZP_04095428.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228827237|gb|EEM72990.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 866
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/874 (52%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHNHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQDVENL----IKKKPSVTGSGAEAGNLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IAE+VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIAEIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|260753989|ref|YP_003226882.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258553352|gb|ACV76298.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 864
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/871 (51%), Positives = 605/871 (69%), Gaps = 28/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K T + I A +A H + P HL ALL D G+ + I AGG+
Sbjct: 1 MNFEKLTDRAKGFIQSAQTVAIRLNHQRIAPEHLLKALLEDDQGMASGLIRRAGGD--PM 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPAS--TTLIKVIRRAQAAQKAHGDTHLAVDQLILG-- 116
A R + A+ K+PS + + P ++++ +A+ GD+++ V++L+L
Sbjct: 59 IAVRDTDAALAKIPSVSGSGANTPPGLDNDTVRLLDQAEQIATKAGDSYVTVERLLLAMT 118
Query: 117 LLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
L+ ++Q+G + K++G+ + + + +LR GR ++A+ + + ALK + RDL A
Sbjct: 119 LMPETQVGKILKDSGLKAEALNTAINELRS--GRTADTATAEDRYDALKKFARDLTAAAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRR ++IL+RRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP L
Sbjct: 177 EGKLDPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEGLR 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D L+ LDMG+L+AGAKYRGEFEERLK VL EV++++G++ILFIDE+H ++GAG+++G+M
Sbjct: 237 DRVLMGLDMGSLIAGAKYRGEFEERLKGVLDEVKQSDGQIILFIDEMHTLIGAGKSDGAM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KP LARG+L CIGATTL EY+KYVEKD A +RRFQ VYV EP+V DT+SILRGL
Sbjct: 297 DAGNLLKPALARGELHCIGATTLAEYQKYVEKDPALQRRFQPVYVGEPTVEDTISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KEKYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEEI+
Sbjct: 357 KEKYEAHHGVRITDAALVSAATLSNRYITNRFLPDKAIDLVDEAASRLRMEVDSKPEEIE 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
NL+R+ +QL+IE AL KE D AS+ RL + +L DL + L R+K E+++I
Sbjct: 417 NLDRRIIQLKIEREALLKENDDASRDRLATLEHDLSDLEQQSSELTTRWKNEQDKIKAEA 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
RLK+K ++ AL++AER DL +A ++ YG I ++E + + + + ML E V
Sbjct: 477 RLKEKLDQARIALEQAERSGDLTKAGEISYGIIPQLEKQLA--DAQNAAQGAMLREEVTS 534
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IA +VSRWTGIPV ++ + E+E+L IG +AV AV+ +V R+RAGL
Sbjct: 535 QDIASIVSRWTGIPVDKMLEGEREKLIHMEDWLGKRVIGQEDAVKAVSRAVRRARAGLQD 594
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL KALA LFDD+ +VRIDMSEYME+H+V+RLIGAPPGY
Sbjct: 595 PSRPIGSFLFLGPTGVGKTELTKALASFLFDDDRAMVRIDMSEYMEKHAVARLIGAPPGY 654
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 655 VGYEEGGVLTEAVRRRPYQVILFDEVEKAHQDVFNILLQVLDDGRLTDGQGRTVDFSNTL 714
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
II+TSNLGA++ L+ + ++ +V++ VR HFRPE LNRLDEI++F L +
Sbjct: 715 IILTSNLGAQY-LANLGEDEPVESVEPKVMEVVRAHFRPEFLNRLDEIILFHRLGQSHMG 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ + LA+R + L ++D A + YDP+YGARP+RR ++K + L+
Sbjct: 774 PIVDIQVQHLCRLLADRKITLKLSDKARAWLGRVGYDPVYGARPLRRAVQKYLQDPLAED 833
Query: 824 LVREEIDENSTVYIDASPKGD-NLVYRVQKN 853
L++ I + TV +D +GD +L+++ + +
Sbjct: 834 LLKGTIRDGQTVDVD---EGDSHLIFKTEDS 861
>gi|318041187|ref|ZP_07973143.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. CB0101]
Length = 872
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/828 (53%), Positives = 603/828 (72%), Gaps = 28/828 (3%)
Query: 33 HLAVALLSDPSGIFAQAINNAGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKV 92
HL ALL+ G+ + + AG + S +RV + + PS + APD + L V
Sbjct: 35 HLFAALLAQ-QGLAGRILEKAGVDLGTLS-QRV-DAFIAAQPSLSAAPDNVYLGKGLNSV 91
Query: 93 IRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRK 151
+ +A A + +GD+++A++ L+L L D + G L +AG ++K V+ +RG +
Sbjct: 92 LDQANALKDTYGDSYIAIEHLLLALAIDDRCGKQLLSQAGTDATKLKDAVQAIRGSQ--T 149
Query: 152 VESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEP 209
V + + T+++L+ YGRDL + A GKLDPVIGRDEEIRR ++ILSRRTKNNPVLIGEP
Sbjct: 150 VTDQNPEGTYESLEKYGRDLTQAAKDGKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEP 209
Query: 210 GVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEE 269
GVGKTA+VEGLAQRIV GDVP L + +LIALDMGAL+AGAKYRGEFEERLKAVLKEV
Sbjct: 210 GVGKTAIVEGLAQRIVNGDVPQALQNRQLIALDMGALIAGAKYRGEFEERLKAVLKEVTA 269
Query: 270 AEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAA 329
+EG+++LFIDEIH V+GAG T G+MDA+NL KPMLARG+LRCIGATTL+E+R+++EKD A
Sbjct: 270 SEGQIVLFIDEIHTVVGAGATGGAMDASNLLKPMLARGELRCIGATTLDEHRQHIEKDPA 329
Query: 330 FERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPD 389
ERRFQQV+V +P+V DT+SILRGLKE+YE HHGVRI D ALV AA LS+RYI R LPD
Sbjct: 330 LERRFQQVFVDQPTVEDTISILRGLKERYEVHHGVRIADNALVAAAVLSSRYIADRFLPD 389
Query: 390 KAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKEL 449
KAIDLVDE+ A +++++ S+PE+ID L+R+ +QLE+E +L +E D ASK RL + KEL
Sbjct: 390 KAIDLVDESAARLKMEITSKPEQIDELDRRILQLEMEKLSLGRESDAASKDRLERLEKEL 449
Query: 450 DDLRDKLQPLMMRYKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAI-- 507
DL ++ L +++KEK IDE+ +K++ E++ +++A+R YDL +AA+L YG +
Sbjct: 450 ADLSEQQSTLNAQWQKEKGSIDELGAIKEEIEQVQLQIEQAKRSYDLNKAAELEYGTLAG 509
Query: 508 --QEVEAAIGQLEGNQSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL----- 560
Q++ A +L D++L L E V D IAEV+++WTGIPV +L Q+E ++L
Sbjct: 510 LHQKLAAKEEELSAGGGDKSL-LREEVTEDDIAEVIAKWTGIPVAKLVQSEMQKLLHLED 568
Query: 561 ------IGLAEAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFD 614
IG A+AV AVA+++ RSRAGL P +P SFLFLGPTGVGKTEL KALA QLFD
Sbjct: 569 ELHTRVIGQAQAVTAVADAIQRSRAGLSDPNRPIASFLFLGPTGVGKTELCKALASQLFD 628
Query: 615 DENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHI 674
+ +VRIDMSEYME+H+VSRLIGAPPGYVG+EEGGQLTEAVRRRPY+V+LFDEVEKAH
Sbjct: 629 SDEAMVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYAVILFDEVEKAHP 688
Query: 675 SVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHL--LSGMMGKVTMQVARDQV 732
VFN +LQ+LDDGR+TDGQGRTVDF NTV+I+TSN+G++ + L+G + + AR V
Sbjct: 689 DVFNVMLQILDDGRVTDGQGRTVDFTNTVLILTSNIGSQSILDLAGDPERHSEMEAR--V 746
Query: 733 LQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALD 792
+ +R HFRPE LNRLDE ++F L ++LR++ LQ++ +A RL ++ + L + ALD
Sbjct: 747 NEALRGHFRPEFLNRLDETIIFHSLKQDELRQIVELQVQRLAKRLEDKKLGLQLNADALD 806
Query: 793 IVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYIDAS 840
+ YDP+YGARP++R +++++ T +++ ++ + TV +D +
Sbjct: 807 WLAGVGYDPVYGARPLKRAIQRELETPIAKGILGGQFTGGHTVAVDVA 854
>gi|291523120|emb|CBK81413.1| ATP-dependent chaperone ClpB [Coprococcus catus GD/7]
Length = 864
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/863 (50%), Positives = 605/863 (70%), Gaps = 29/863 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG--GENA 58
M+ +KFT K+ +A+ +LA G+ + HL ++LL+ + + + G E
Sbjct: 1 MDLNKFTQKSLQAVQDCQKLAYQYGNQKIEQEHLLLSLLTQEDSLIDRLLAKMGINHEGF 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A ++ + +K Q D L + + RA+ K D +++V+ L L L
Sbjct: 61 KVQATKLVEKLVKVSGGQVYVGD------NLNRTLVRAEEEAKQMDDEYISVEHLFLALF 114
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLV--EQ 174
E DS I LF+ V + +RG + +V S + + T+ +L Y DLV +
Sbjct: 115 ETADSDIKTLFRNFEVTRDGFLQALSTVRGNQ--RVTSDNPEATYDSLSKYAEDLVGKAR 172
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
A K+DPVIGRD EIR ++RILSR+TKNNPVLIGEPGVGKTAV+EGLAQRIV+GDVP L
Sbjct: 173 AQKMDPVIGRDTEIRNIIRILSRKTKNNPVLIGEPGVGKTAVIEGLAQRIVKGDVPDGLK 232
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D ++ +LDMGALVAGAKYRGEFEERLKAVL EV++++G++ILFIDE+HL++GAG+T+G+M
Sbjct: 233 DKKIYSLDMGALVAGAKYRGEFEERLKAVLAEVKKSDGEIILFIDELHLIVGAGKTDGAM 292
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA+N+ KPMLARG+L CIGATTL+EYR+Y+EKD A ERRFQ V V EP+V DT++ILRGL
Sbjct: 293 DASNMLKPMLARGELHCIGATTLDEYRQYIEKDKALERRFQPVMVDEPTVEDTIAILRGL 352
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 353 KERYEVFHGVKITDGALVAAATLSHRYITDRFLPDKAIDLVDEACAMIKTELDSMPTELD 412
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL+KE DK S+ RL + E+ +LR+ + ++ EK+ +++++
Sbjct: 413 EISRKIMQLEIEEAALKKEDDKLSQERLQNITHEIAELREDFKVQKAKWDDEKQDVEKLQ 472
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVG 533
L+++ E+L ++ A+R YDL +AA+L+YG + +++ + + E +EN +L E V
Sbjct: 473 SLREQIEDLNKQIELAQRNYDLNKAAELQYGKLPQLKKQLEEEEARVHGEENSILRERVT 532
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
++IA +VSRWTGIPV +L ++E+ +R+IG E V+ V E+++RS+AG+
Sbjct: 533 DEEIARIVSRWTGIPVAKLTESERNKILHLDDELHKRVIGQEEGVSKVTEAIIRSKAGIQ 592
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
+P GSFLFLGPTGVGKTELAKALAE LFDDEN +VRIDMSEYME+ SVSRLIGAPPG
Sbjct: 593 DENRPIGSFLFLGPTGVGKTELAKALAENLFDDENNMVRIDMSEYMEKFSVSRLIGAPPG 652
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LLQ+LDDGR+TD QGRTVDF+NT
Sbjct: 653 YVGYEEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNVLLQILDDGRVTDSQGRTVDFKNT 712
Query: 703 VIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
++IMTSN+G+ +LL G+ G ++ + AR + +++ HFRPE LNRLDEI++F PL+ +
Sbjct: 713 ILIMTSNIGSSYLLEGIDSEGNISDE-ARQNTMNDLKAHFRPEFLNRLDEIIMFKPLTKD 771
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+ + + + + RL + + L +T AA D + YDP+YGARP++R+++K V T +
Sbjct: 772 NISGIIDILIGRLNKRLETKELTLQLTPAAKDYITDHGYDPVYGARPLKRYIQKNVETMV 831
Query: 821 SRMLVREEIDENSTVYIDASPKG 843
++M++ E++ + +DA G
Sbjct: 832 AKMILGNELEPGDCINVDADANG 854
>gi|16804245|ref|NP_465730.1| hypothetical protein lmo2206 [Listeria monocytogenes EGD-e]
gi|47097347|ref|ZP_00234901.1| clpB protein [Listeria monocytogenes str. 1/2a F6854]
gi|254826905|ref|ZP_05231592.1| clpB protein [Listeria monocytogenes FSL N3-165]
gi|254912767|ref|ZP_05262779.1| clpB protein [Listeria monocytogenes J2818]
gi|254937094|ref|ZP_05268791.1| clpB protein [Listeria monocytogenes F6900]
gi|255026542|ref|ZP_05298528.1| hypothetical protein LmonocytFSL_09773 [Listeria monocytogenes FSL
J2-003]
gi|255028203|ref|ZP_05300154.1| hypothetical protein LmonL_01239 [Listeria monocytogenes LO28]
gi|386044519|ref|YP_005963324.1| ATP-dependent chaperone ClpB [Listeria monocytogenes 10403S]
gi|386047862|ref|YP_005966194.1| ATP-dependent chaperone ClpB [Listeria monocytogenes J0161]
gi|386051182|ref|YP_005969173.1| clpB protein [Listeria monocytogenes FSL R2-561]
gi|404284704|ref|YP_006685601.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404411513|ref|YP_006697101.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|405759258|ref|YP_006688534.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|54035874|sp|Q8Y570.1|CLPB_LISMO RecName: Full=Chaperone protein ClpB
gi|403399753|sp|G2K265.1|CLPB_LISM4 RecName: Full=Chaperone protein ClpB
gi|16411676|emb|CAD00284.1| clpB [Listeria monocytogenes EGD-e]
gi|47014270|gb|EAL05249.1| clpB protein [Listeria monocytogenes str. 1/2a F6854]
gi|258599285|gb|EEW12610.1| clpB protein [Listeria monocytogenes FSL N3-165]
gi|258609696|gb|EEW22304.1| clpB protein [Listeria monocytogenes F6900]
gi|293590761|gb|EFF99095.1| clpB protein [Listeria monocytogenes J2818]
gi|345534853|gb|AEO04294.1| ATP-dependent chaperone ClpB [Listeria monocytogenes J0161]
gi|345537753|gb|AEO07193.1| ATP-dependent chaperone ClpB [Listeria monocytogenes 10403S]
gi|346425028|gb|AEO26553.1| clpB protein [Listeria monocytogenes FSL R2-561]
gi|404231339|emb|CBY52743.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|404234206|emb|CBY55609.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404237140|emb|CBY58542.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC2479]
Length = 866
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/864 (50%), Positives = 616/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + H+ LL++ FA+ + + E
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESD--FAKRVYDVA-EVDTD 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++V ++K+P S + S L +++R A+ Q+ D ++ + LIL ++
Sbjct: 58 ALQKVIENTLEKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQQQLEDDFVSTEHLILAVM 117
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K A ++K + K+RG G++V S + + ++AL YGRDLV +
Sbjct: 118 DQKSNPITAELKNQHKAKKQIKEAILKIRG--GKRVTSQNAEENYEALTKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEILQRELADYKEEANQMKSKWESEKNEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I V + + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGRIPAVEKELLELEAENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVQLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGY+G+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYIGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEITITISDDAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID + K
Sbjct: 835 PLAREIVSGKIMPHSSVEIDLADK 858
>gi|421527506|ref|ZP_15974107.1| ClpB protein [Fusobacterium nucleatum ChDC F128]
gi|402256384|gb|EJU06865.1| ClpB protein [Fusobacterium nucleatum ChDC F128]
Length = 857
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/868 (49%), Positives = 605/868 (69%), Gaps = 32/868 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP++FT T AI +A +++ P LA+ LL +G+ + I G
Sbjct: 1 MNPNQFTENTISAINLAVDISKGNMQQSIRPEALALGLLMQNNGLIPRVIEKMGLNLQYI 60
Query: 61 SAERVFNQAMKKLPSQ--TPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+E + M P + D I ++ RA+ K D+ L+V+ + ++
Sbjct: 61 ISE--LEKEMNNYPKVEVKVSNDNISLDQKTNTILNRAEMVMKEMEDSFLSVEHIFKAMI 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
E+ I FK G+++ + + +RG RKV++ + + T++ L+ Y +DLVE A G
Sbjct: 119 EEMPI---FKRLGISLEKYMEVLMNIRG--NRKVDNQNPEATYEVLEKYAKDLVELAREG 173
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DP+IGRD EIRR ++I+SRRTKN+P+LIGEPGVGKTA+VEGLAQRI+ GDVP +L +
Sbjct: 174 KMDPIIGRDSEIRRAIQIISRRTKNDPILIGEPGVGKTAIVEGLAQRILNGDVPESLKNK 233
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
++ +LDMGALVAGAKY+GEFEER+K VLKEVEE+ G +ILFIDEIH ++GAG+ EGS+DA
Sbjct: 234 KIFSLDMGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGSLDA 293
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR IGATT++EYRKY+EKD A ERRFQ + V EP+V DT+SILRGLK+
Sbjct: 294 GNMLKPMLARGELRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNVDDTISILRGLKD 353
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
K+E +HGVRI D A+V AA LS RYI+ R LPDKAIDL+DEA A +R ++DS PEE+D L
Sbjct: 354 KFETYHGVRITDTAIVEAATLSQRYISDRKLPDKAIDLIDEAAAMIRTEIDSMPEELDQL 413
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
RK +QLEIE+ ALEKE D ASK RL + KEL +L ++ + L +++ EKE I +I+ +
Sbjct: 414 TRKALQLEIEIKALEKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDISKIKNI 473
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLTETV 532
K++ E + +++AER YDL + ++L+YG + +E + + + N+SD EN +L + V
Sbjct: 474 KREIENVKLEMEKAEREYDLTKLSELKYGKLASLEKELLE-QQNKSDKDGKENSLLKQEV 532
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSRAGL 581
D+IA++VSRWTGIPV++L + +KE+++ G EAV AVA+++LRS AGL
Sbjct: 533 TADEIADIVSRWTGIPVSKLTETKKEKMLHLEDHIKERVKGQDEAVKAVADTMLRSVAGL 592
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKT LAK LA LFD E+ +VRIDMSEYM++ SV+RLIGAPP
Sbjct: 593 KDPNRPMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDNVVRIDMSEYMDKFSVTRLIGAPP 652
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEA+R +PYSV+LFDE+EKAH VFN LLQVLDDGRLTDGQGR VDF+N
Sbjct: 653 GYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVDFKN 712
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+IIMTSN+G+ +L + R++V E++ F+PE LNR+DEI+ F L
Sbjct: 713 TLIIMTSNIGSHFILE---DPNLSEDTREKVADELKARFKPEFLNRIDEIITFKALDLPA 769
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
++++ +L +KD+ +L + + L +D +D + +YDP YGARP+RR++++++ T L+
Sbjct: 770 IKEIVKLSLKDLENKLKPKHITLEFSDKMVDYLANNAYDPHYGARPLRRYIQREIETSLA 829
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYR 849
+ ++ E+ E S V ID D++V++
Sbjct: 830 KKILANEVHEKSNVLIDLD--NDHIVFK 855
>gi|284802653|ref|YP_003414518.1| hypothetical protein LM5578_2409 [Listeria monocytogenes 08-5578]
gi|284995795|ref|YP_003417563.1| hypothetical protein LM5923_2360 [Listeria monocytogenes 08-5923]
gi|404414290|ref|YP_006699877.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|284058215|gb|ADB69156.1| hypothetical protein LM5578_2409 [Listeria monocytogenes 08-5578]
gi|284061262|gb|ADB72201.1| hypothetical protein LM5923_2360 [Listeria monocytogenes 08-5923]
gi|404239989|emb|CBY61390.1| ATP-dependent Clp protease, ATP-binding subunit [Listeria
monocytogenes SLCC7179]
Length = 866
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/864 (50%), Positives = 616/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + H+ LL++ FA+ + + E
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESD--FAKRVYDVA-EVDTD 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++V ++K+P S + S L ++++ A+ Q+ D ++ + LIL ++
Sbjct: 58 ALQKVIENTLEKIPVVSGSGVNYGQAMSQALFQLMKDAEKEQQQLEDDFVSTEHLILAVM 117
Query: 119 --EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K A ++K + K+RG G++V S + + ++AL YGRDLV +
Sbjct: 118 NQKSNPITAELKNQHKAKKQIKEAILKIRG--GKRVTSQNAEENYEALTKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEILQRELADYKEEANQMKSKWESEKNEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I V + + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGRIPAVEKELLELEAENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVQLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGY+G+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYIGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEITITISDDAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID + K
Sbjct: 835 PLAREIVSGKIMPHSSVEIDLADK 858
>gi|418275449|ref|ZP_12890772.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
plantarum subsp. plantarum NC8]
gi|376009000|gb|EHS82329.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus
plantarum subsp. plantarum NC8]
Length = 867
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/880 (51%), Positives = 615/880 (69%), Gaps = 47/880 (5%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP++FT +A+ A ++A + H + HL L+ P + Q + AG +
Sbjct: 1 MNPEQFTESLQQALQQAQQIAQTRRHQEIGVPHL-FKFLTQPGELVRQIFSEAGAD---- 55
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA------------STTLIKVIRRAQAAQKAHGDTHL 108
+Q +L + D+I S++L +++ A A +KA GD +L
Sbjct: 56 -----LDQLQTELDREL---DDIAVVSGGNVQYGGSMSSSLATLMQAADAKRKALGDDYL 107
Query: 109 AVDQLILGLLEDS--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKT 166
A D L L L++ + Q+ + G+ +VK+ V+++RG G++V S + + +QAL+
Sbjct: 108 ATDTLALALMDQTGDQLTKYLNQQGIMAGQVKNAVDRIRG--GQRVTSRNQEDQYQALEK 165
Query: 167 YGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRI 224
YG DLV+QA G DPVIGRDEEI V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRI
Sbjct: 166 YGVDLVKQARQGNQDPVIGRDEEILDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRI 225
Query: 225 VRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLV 284
VRGDVP NL D L +LDMG+L+AGAKYRGEFEERLKAVLKE+++++G++I+FIDEIH +
Sbjct: 226 VRGDVPENLKDKTLFSLDMGSLIAGAKYRGEFEERLKAVLKEIKKSDGQIIMFIDEIHNI 285
Query: 285 LGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV 344
+GAG+TEGSMDA NL KPMLARG+L IGATTL+EYR+Y+EKD A ERRFQ+V VAEPSV
Sbjct: 286 VGAGKTEGSMDAGNLLKPMLARGELHLIGATTLDEYRQYMEKDKALERRFQKVLVAEPSV 345
Query: 345 PDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRV 404
DT+SILRGLKE++E HHGVRI D ALV AA+LS RYIT R+LPDKA+DLVDEA A +RV
Sbjct: 346 EDTISILRGLKERFEIHHGVRIHDNALVAAAKLSDRYITDRYLPDKALDLVDEASAEIRV 405
Query: 405 QLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYK 464
+++S P E+D + R+ M+LE+E AL+ E D AS RL +V+KEL ++K + L R+
Sbjct: 406 EMNSNPTELDQVNRQLMRLEVEEAALKNETDDASVKRLADVQKELASAKEKQRALSERWD 465
Query: 465 KEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE 524
EK+ + + K ++ L+ AE YDL +AA L++G I ++E + +E N E
Sbjct: 466 SEKKSLQALSDKKSALDKAKHDLENAENNYDLEQAAKLQHGTIPKLEQELKAMEANDHHE 525
Query: 525 NLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAES 573
+ ++ E+V PDQIA VVSR TGIPV +L E+E+L+ LA+ AV+AV+++
Sbjct: 526 DWLVEESVTPDQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDA 585
Query: 574 VLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV 633
VLRSRAGL P +P GSF+FLGPTGVGKTELAKALAE LFD ++ +VRIDMSEYME+ SV
Sbjct: 586 VLRSRAGLQDPNRPLGSFMFLGPTGVGKTELAKALAENLFDADDHMVRIDMSEYMEKESV 645
Query: 634 SRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQ 693
SRL+GA PGYVG+EEGGQLTEAVRR PYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQ
Sbjct: 646 SRLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTDGQ 705
Query: 694 GRTVDFRNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEI 751
GRTVDF+NT++IMTSNLG+E LL+G+ G ++ + QV+Q V+ F+PE LNR+D+I
Sbjct: 706 GRTVDFKNTILIMTSNLGSELLLAGVDDQGHLSADTHQ-QVMQLVQSRFKPEFLNRIDDI 764
Query: 752 VVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRW 811
++F PL + ++ + ++ RL +R + L ++D A + + Y+P YGARP+RR+
Sbjct: 765 IMFTPLQLGAIEEIVVKLIDRLSARLQDREITLKISDEAKKWIAKQGYEPAYGARPLRRF 824
Query: 812 LEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+ V T L++ ++ + STV I+ D+LV+ Q
Sbjct: 825 ITNHVETPLAKEIIAGRVAPKSTVAINLM--DDHLVFENQ 862
>gi|386054461|ref|YP_005972019.1| ATP-dependent chaperone ClpB [Listeria monocytogenes Finland 1998]
gi|346647112|gb|AEO39737.1| ATP-dependent chaperone ClpB [Listeria monocytogenes Finland 1998]
Length = 866
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/864 (50%), Positives = 616/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + H+ LL++ FA+ + + E
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESD--FAKRVYDVS-EVDTD 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++V ++K+P S + S L +++R A+ Q+ D ++ + LIL ++
Sbjct: 58 ALQKVIENTLEKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQQRLEDDFVSTEHLILAVM 117
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K A ++K + K+RG G++V S + + ++AL YGRDLV +
Sbjct: 118 DQKSNPITAELKNQHKAKKQIKEAIIKIRG--GKRVTSQNAEENYEALTKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEILQRELADYKEEANQMKSKWESEKNEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I V + + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGRIPAVEKELLELEAENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVQLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGY+G+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYIGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEITITISDDAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID + K
Sbjct: 835 PLAREIVSGKIMPHSSVEIDLADK 858
>gi|222625166|gb|EEE59298.1| hypothetical protein OsJ_11345 [Oryza sativa Japonica Group]
Length = 923
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/860 (50%), Positives = 603/860 (70%), Gaps = 32/860 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT ++I + E+A + H HL +LL +G+ + + AG +N R
Sbjct: 33 EFTEMAWQSIVSSPEVAKESKHQIVETEHLMKSLLEQRNGLARRIFSKAGVDNT-----R 87
Query: 65 VFNQAMKKLPSQTPAPDEIPAST---TLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ + K + Q E P S L +I+RA+ +K +GD+ ++V+ L+LG ED
Sbjct: 88 LLDATEKFIQRQPKVLGEDPGSMLGRDLEALIQRARDFKKEYGDSFVSVEHLVLGFAEDK 147
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LFK+ + V +K+ +E +RGK+ + G ++AL YG+DL A GKL
Sbjct: 148 RFGRQLFKDFQITVQSLKTAIESIRGKQNVIDQDPEG--KYEALDKYGKDLTAMARQGKL 205
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L + RL
Sbjct: 206 DPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPQALTNRRL 265
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFE+RLKAVLKEV +++G+ ILFIDEIH V+GAG T G+MDA N
Sbjct: 266 IALDMGALIAGAKYRGEFEDRLKAVLKEVTDSDGQTILFIDEIHTVVGAGATNGAMDAGN 325
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +PSV DT+SILRGL+E+Y
Sbjct: 326 LLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTISILRGLRERY 385
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDE+ A +++++ S+P +D ++R
Sbjct: 386 ELHHGVRISDSALVAAALLSDRYISGRFLPDKAIDLVDESAAKLKMEITSKPTALDEIDR 445
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
++LE+E +L + DKAS+ RL + EL L++K + L ++++EK + +I+ +K+
Sbjct: 446 AVIKLEMERLSLTNDTDKASRDRLSRIEAELSLLKEKQKDLTEQWEREKSVMTKIQSIKE 505
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG++ ++++ +L+ QS ML E V
Sbjct: 506 EIDRVNVEIQQAEREYDLNRAAELKYGSLNALQRQLQTTEKELDEYQSSGKSMLREEVTQ 565
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D IAE+VSRWTGIPV++L Q+++ +R++G AV AV+E++ RSRAGL
Sbjct: 566 DDIAEIVSRWTGIPVSKLKQSDREKLLYLEEELHKRVVGQDPAVKAVSEAIQRSRAGLSD 625
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+F+GPTGVGKTELAKALA +F+ E +VRIDMSEYME+HSVSRLIGAPPGY
Sbjct: 626 PNRPIASFMFMGPTGVGKTELAKALAAFMFNTEEAVVRIDMSEYMEKHSVSRLIGAPPGY 685
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRRRPYS++LFDE+EKAH VFN LQ+LDDGR+TD QGR V F N++
Sbjct: 686 VGYEEGGQLTEAVRRRPYSIILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRKVSFTNSI 745
Query: 704 IIMTSNLGAEHLLS----GMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
IIMTSN+G++ +L+ G + + +V+ R FRPE +NR+DE +VF PL
Sbjct: 746 IIMTSNVGSQFILNMDEEGGSTDSAYENIKKRVMDAARSVFRPEFMNRIDEYIVFKPLER 805
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
EQ+ + +LQ+ V R+A+R + L V+ A++ + + YDP YGARP++R +++ V E
Sbjct: 806 EQINSIVKLQLARVQKRIADRKIKLEVSPGAVEFLGSLGYDPNYGARPVKRVIQQYVENE 865
Query: 820 LSRMLVREEIDENSTVYIDA 839
L++ ++R + + ++ +D
Sbjct: 866 LAKGILRGDFKDEDSILVDT 885
>gi|300768067|ref|ZP_07077972.1| chaperone protein ClpB [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300494131|gb|EFK29294.1| chaperone protein ClpB [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 882
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/880 (51%), Positives = 615/880 (69%), Gaps = 47/880 (5%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP++FT +A+ A ++A + H + HL L+ P + Q + AG +
Sbjct: 16 MNPEQFTESLQQALQQAQQIAQTRRHQEIGVPHL-FKFLTQPGELVRQIFSEAGAD---- 70
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA------------STTLIKVIRRAQAAQKAHGDTHL 108
+Q +L + D+I S++L +++ A A +KA GD +L
Sbjct: 71 -----LDQLQTELDREL---DDIAVVSGGNVQYGGSMSSSLATLMQAADAKRKALGDDYL 122
Query: 109 AVDQLILGLLEDS--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKT 166
A D L L L++ + Q+ + G+ +VK+ V+++RG G++V S + + +QAL+
Sbjct: 123 ATDTLALALMDQTGDQLTKYLNQQGIMAGQVKNAVDRIRG--GQRVTSRNQEDQYQALEK 180
Query: 167 YGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRI 224
YG DLV+QA G DPVIGRDEEI V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRI
Sbjct: 181 YGVDLVKQARQGNQDPVIGRDEEILDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRI 240
Query: 225 VRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLV 284
VRGDVP NL D L +LDMG+L+AGAKYRGEFEERLKAVLKE+++++G++I+FIDEIH +
Sbjct: 241 VRGDVPENLKDKTLFSLDMGSLIAGAKYRGEFEERLKAVLKEIKKSDGQIIMFIDEIHNI 300
Query: 285 LGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV 344
+GAG+TEGSMDA NL KPMLARG+L IGATTL+EYR+Y+EKD A ERRFQ+V VAEPSV
Sbjct: 301 VGAGKTEGSMDAGNLLKPMLARGELHLIGATTLDEYRQYMEKDKALERRFQKVLVAEPSV 360
Query: 345 PDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRV 404
DT+SILRGLKE++E HHGVRI D ALV AA+LS RYIT R+LPDKA+DLVDEA A +RV
Sbjct: 361 EDTISILRGLKERFEIHHGVRIHDNALVAAAKLSDRYITDRYLPDKALDLVDEASAEIRV 420
Query: 405 QLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYK 464
+++S P E+D + R+ M+LE+E AL+ E D AS RL +V+KEL ++K + L R+
Sbjct: 421 EMNSNPTELDQVNRQLMRLEVEEAALKNETDDASVKRLADVQKELASAKEKQRALSERWD 480
Query: 465 KEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE 524
EK+ + + K ++ L+ AE YDL +AA L++G I ++E + +E N E
Sbjct: 481 SEKKSLQALSDKKSALDKAKHDLENAENNYDLEQAAKLQHGTIPKLEQELKAMEANDHHE 540
Query: 525 NLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAES 573
+ ++ E+V PDQIA VVSR TGIPV +L E+E+L+ LA+ AV+AV+++
Sbjct: 541 DWLVEESVTPDQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDA 600
Query: 574 VLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV 633
VLRSRAGL P +P GSF+FLGPTGVGKTELAKALAE LFD ++ +VRIDMSEYME+ SV
Sbjct: 601 VLRSRAGLQDPNRPLGSFMFLGPTGVGKTELAKALAENLFDADDHMVRIDMSEYMEKESV 660
Query: 634 SRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQ 693
SRL+GA PGYVG+EEGGQLTEAVRR PYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQ
Sbjct: 661 SRLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTDGQ 720
Query: 694 GRTVDFRNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEI 751
GRTVDF+NT++IMTSNLG+E LL+G+ G ++ + QV+Q V+ F+PE LNR+D+I
Sbjct: 721 GRTVDFKNTILIMTSNLGSELLLAGVDDQGHLSADTHQ-QVMQLVQSRFKPEFLNRIDDI 779
Query: 752 VVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRW 811
++F PL + ++ + ++ RL +R + L ++D A + + Y+P YGARP+RR+
Sbjct: 780 IMFTPLQLGAIEEIVVKLIDRLSARLQDREITLKISDEAKKWIAKQGYEPAYGARPLRRF 839
Query: 812 LEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+ V T L++ ++ + STV I+ D+LV+ Q
Sbjct: 840 ITNHVETPLAKEIIAGRVAPKSTVAINLM--DDHLVFENQ 877
>gi|108797458|ref|YP_637655.1| ATPase AAA-2 [Mycobacterium sp. MCS]
gi|119866543|ref|YP_936495.1| ATPase [Mycobacterium sp. KMS]
gi|126433079|ref|YP_001068770.1| ATPase [Mycobacterium sp. JLS]
gi|108767877|gb|ABG06599.1| ATPase AAA-2 [Mycobacterium sp. MCS]
gi|119692632|gb|ABL89705.1| ATPase AAA-2 domain protein [Mycobacterium sp. KMS]
gi|126232879|gb|ABN96279.1| ATPase AAA-2 domain protein [Mycobacterium sp. JLS]
Length = 848
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/866 (52%), Positives = 602/866 (69%), Gaps = 42/866 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + A++AG+ Q P HL +ALL+ GI A + G E A
Sbjct: 4 FNP---TTKTQAALTSALQAASAAGNPQIAPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
AE + + +LPS + A + S + + AQ D +++ + L++GL
Sbjct: 61 RAET--QRLLDRLPSASGASSQPQLSRESLAAVTAAQQLATEIDDEYVSTEHLMVGLATG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
DS + L G + ++ K+RG +V S + ++QAL+ Y DL +A G+
Sbjct: 119 DSDVAKLLTGHGASPQALREAFVKVRGSA--RVTSPDPEGSYQALEKYSTDLTARAREGQ 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L
Sbjct: 177 LDPVIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+I+LD+G++VAG+KYRGEFEERLKAVL +++ + G++I FIDE+H ++GAG T + SMDA
Sbjct: 237 VISLDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGDSSMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQVYV EPSV DTV ILRGLKE
Sbjct: 297 GNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVYVGEPSVEDTVGILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+P EID +
Sbjct: 357 RYEVHHGVRITDSALVSAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE AL KE+D ASK RL ++R EL D ++KL L R++ EK ID +R L
Sbjct: 417 ERLVRRLEIEEMALAKEEDDASKERLEKLRGELADYKEKLAELTTRWQNEKNAIDIVREL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVE----AAIGQLEGNQSDENLMLTETV 532
K++ E L AER +L +AA+LRYG I EVE AA+ Q E +++ML E V
Sbjct: 477 KEQLEALRGEADRAERDGNLEKAAELRYGRIPEVEKKLDAAVPQAEAR---DDVMLKEEV 533
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
GPD IAEVVS WTGIP R+ + E +R++G AV AV+++V R+RAG+
Sbjct: 534 GPDDIAEVVSAWTGIPAGRMLEGETAKLLRMEDELGKRVVGQRRAVQAVSDAVRRTRAGV 593
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +PTGSF+FLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RL+GAPP
Sbjct: 594 ADPNRPTGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPP 653
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GY+G+++GGQLTEAVRRRPY+VVLFDE+EKAH VF+ LLQVLD+GRLTDGQGRTVDFRN
Sbjct: 654 GYIGYDQGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRN 713
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T++I+TSNLGA D V+ VR F+PE +NRLD+++VFD L+ E+
Sbjct: 714 TILILTSNLGAGG-------------TEDMVMAAVRSAFKPEFINRLDDVIVFDGLNPEE 760
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L + +Q++ +A RLA+R + L V+ A + +DP+YGARP+RR +++ + +L+
Sbjct: 761 LVSIVDIQLQQLAKRLAQRRLTLEVSLPAKKWLADRGFDPLYGARPLRRLIQQSIGDQLA 820
Query: 822 RMLVREEIDENSTVYIDASPKGDNLV 847
+ML+ ++ + V ++ SP G++LV
Sbjct: 821 KMLLAGDVHDGDIVPVNVSPDGESLV 846
>gi|415725997|ref|ZP_11470498.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis
00703Dmash]
gi|388063870|gb|EIK86438.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis
00703Dmash]
Length = 864
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/867 (51%), Positives = 613/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + A +AG+AQ LHLA ALL G+ I AG + AE
Sbjct: 4 KFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIGAE- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-- 121
A+ LPS T + P AS L+ + +A+ +A GD +++ + +++G++ +
Sbjct: 63 -IRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMRAMGDEYVSTEHMLIGMVASAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 122 AVADIFKKYNVSADALRKAVPTVRG--GAKVTSPDAEGNYKALEKYSIDMTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVLKE+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 240 SLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EYR+++EKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 300 LKPMLARGELRLVGATTLNEYREHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A++ RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDAAARERLEKLQEELANSREKLAGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E ++ E + PDQ
Sbjct: 480 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESEAANAKSEAKEPMVPDQVDA 539
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 540 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 600 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 660 IGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PLS E+L
Sbjct: 720 LIMTSNLGSQFLVQEGLDDAA---KRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELG 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ VA RL++R ++L V+D+A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 777 GIVDIQVRQVAARLSDRRISLDVSDSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 836
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + V D + D+++ ++
Sbjct: 837 LLSGKVHDGARVVADCAESDDHVILKI 863
>gi|397677499|ref|YP_006519037.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ATCC
29191]
gi|395398188|gb|AFN57515.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ATCC
29191]
Length = 864
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/871 (51%), Positives = 605/871 (69%), Gaps = 28/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K T + I A +A H + P HL ALL D G+ + I AGG+
Sbjct: 1 MNFEKLTDRAKGFIQSAQTVAIRLNHQRIAPEHLLKALLEDDQGMASGLIRRAGGD--PM 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPAS--TTLIKVIRRAQAAQKAHGDTHLAVDQLILG-- 116
A R + A+ K+PS + + P ++++ +A+ GD+++ V++L+L
Sbjct: 59 IAVRDTDAALAKIPSVSGSGANTPPGLDNDTVRLLDQAEQIATKAGDSYVTVERLLLAMT 118
Query: 117 LLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
L+ ++Q+G + K++G+ + + + +LR GR ++A+ + + ALK + RDL A
Sbjct: 119 LMPETQVGKILKDSGLRAEALNTAINELRS--GRTADTATAEDRYDALKKFARDLTAAAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRR ++IL+RRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP L
Sbjct: 177 EGKLDPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEGLR 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D L+ LDMG+L+AGAKYRGEFEERLK VL EV++++G++ILFIDE+H ++GAG+++G+M
Sbjct: 237 DRVLMGLDMGSLIAGAKYRGEFEERLKGVLDEVKQSDGQIILFIDEMHTLIGAGKSDGAM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KP LARG+L CIGATTL EY+KYVEKD A +RRFQ VYV EP+V DT+SILRGL
Sbjct: 297 DAGNLLKPALARGELHCIGATTLAEYQKYVEKDPALQRRFQPVYVGEPTVEDTISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KEKYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEEI+
Sbjct: 357 KEKYEAHHGVRITDAALVSAATLSNRYITNRFLPDKAIDLVDEAASRLRMEVDSKPEEIE 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
NL+R+ +QL+IE AL KE D AS+ RL + +L DL + L R+K E+++I
Sbjct: 417 NLDRRIIQLKIEREALLKENDDASRDRLATLEHDLSDLEQQSSELTTRWKNEQDKIKAEA 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
RLK+K ++ AL++AER DL +A ++ YG I ++E + + + + ML E V
Sbjct: 477 RLKEKLDQARIALEQAERSGDLTKAGEISYGIIPQLEKQLA--DAQNAAQGAMLREEVTS 534
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
IA +VSRWTGIPV ++ + E+E R+IG +AV AV+ +V R+RAGL
Sbjct: 535 QDIASIVSRWTGIPVDKMLEGEREKLIHMEDWLGKRVIGQEDAVKAVSRAVRRARAGLQD 594
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL KALA LFDD+ +VRIDMSEYME+H+V+RLIGAPPGY
Sbjct: 595 PSRPIGSFLFLGPTGVGKTELTKALASFLFDDDRAMVRIDMSEYMEKHAVARLIGAPPGY 654
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 655 VGYEEGGVLTEAVRRRPYQVILFDEVEKAHQDVFNILLQVLDDGRLTDGQGRTVDFSNTL 714
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
II+TSNLGA++ L+ + ++ +V++ VR HFRPE LNRLDEI++F L +
Sbjct: 715 IILTSNLGAQY-LANLGEDEPVETVEPKVMEVVRAHFRPEFLNRLDEIILFHRLGQSHMG 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ + LA+R + L ++D A + YDP+YGARP+RR ++K + L+
Sbjct: 774 PIVDIQVQHLCRLLADRKITLKLSDKARAWLGRVGYDPVYGARPLRRAVQKYLQDPLAED 833
Query: 824 LVREEIDENSTVYIDASPKGD-NLVYRVQKN 853
L++ I + TV +D +GD +L+++ + +
Sbjct: 834 LLKGTIRDGQTVDVD---EGDSHLIFKTEDS 861
>gi|254478026|ref|ZP_05091410.1| ATP-dependent chaperone ClpB [Carboxydibrachium pacificum DSM
12653]
gi|214036030|gb|EEB76720.1| ATP-dependent chaperone ClpB [Carboxydibrachium pacificum DSM
12653]
Length = 864
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/861 (49%), Positives = 609/861 (70%), Gaps = 26/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT A+ A A H + HL AL+++ + A+ + N G +
Sbjct: 1 MNMEKFTQNLQNALLDAQNTAILYKHQEIGIEHLHYALVNEEDKLIAKILKNMGIN--IE 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
++ ++K+P P + + + +++ A+ K D +++V+ + L +++
Sbjct: 59 LYKKDLETELRKIPMVYGPGATAVYVNRIVNEILLEAEDEAKKFKDEYISVEHVYLVIID 118
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ + GV + ++ K+RG +++ + + + T++ LK YGR+L E A
Sbjct: 119 YDHPSTKTILRRYGVNREKFLQQLYKIRG--NQRITTQNPEETYEVLKKYGRNLTELARR 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L D
Sbjct: 177 GKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ ALD+GAL+AGAKYRGEFEERLKAVL E+ +EGK+ILFIDEIH ++GAGR EG+MD
Sbjct: 237 KTIFALDLGALIAGAKYRGEFEERLKAVLNEITASEGKIILFIDEIHTIVGAGRAEGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+L CIGATT++EYRKY+EKDAA ERRFQ V V PSV DT+SILRGLK
Sbjct: 297 AGNLLKPMLARGELHCIGATTIDEYRKYIEKDAALERRFQPVLVNPPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E++E HHGVRI D AL+ AA+LS RYI R LPDKAIDL+DEA A +R ++DS P +D
Sbjct: 357 ERFEIHHGVRITDNALIAAAKLSDRYIPDRFLPDKAIDLIDEAAALLRTEIDSMPVALDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ +K MQ +IE + L+KE+++ +K ++ E+ +E+ +L DK L ++K EKE I EIRR
Sbjct: 417 ITKKIMQFKIEKNILQKEENEDAKQKIEEIDREIAELNDKANQLSAQWKYEKELIKEIRR 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTET 531
+K++ EE+ ++EAER YDL + ++L+YG + +++E + E D+ L L E
Sbjct: 477 IKEEIEEVKIQIEEAERNYDLNKLSELKYGKLFGLQKKLEQKRQEFEKIPPDKRL-LKEK 535
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
V ++IA++VS+WTGIPVT+L + E++ R++G EA+ AV +++R+RAG
Sbjct: 536 VTEEEIAKIVSKWTGIPVTKLIETERQKILELDKILHRRVVGQDEAIEAVCNAIMRARAG 595
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ ++P GSFLFLGPTGVGKTELAKALAE LFD EN ++RIDM+EYME+HSVS+LIGAP
Sbjct: 596 MKDLRRPIGSFLFLGPTGVGKTELAKALAEALFDSENNMIRIDMTEYMEKHSVSKLIGAP 655
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVR +PYSVVLFDE+EKAH VFN LLQ++DDGRLTD +G+T+DF+
Sbjct: 656 PGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHHDVFNILLQIMDDGRLTDSKGKTIDFK 715
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQ-EVRKHFRPELLNRLDEIVVFDPLSH 759
NT+IIMTSNLG+E+LL+ + + Q++ E++ HFRPE LNRLDEI++F PL+
Sbjct: 716 NTIIIMTSNLGSEYLLNANISNGEIDEKTKQLIDGELKMHFRPEFLNRLDEIIIFKPLTK 775
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
EQ+ K+ L++ ++ +L E+G+ + +T A + V+ ++D +GARPI+R+L+K V T
Sbjct: 776 EQIMKIIDLRVAEIQEKLIEKGITITLTQKAKEYVIKNAFDVNFGARPIKRFLQKNVETL 835
Query: 820 LSRMLVREEIDENSTVYIDAS 840
+++ +++E I + ++ +D +
Sbjct: 836 IAKEILKENIKDGDSITVDIA 856
>gi|392414317|ref|YP_006450922.1| ATP-dependent chaperone ClpB [Mycobacterium chubuense NBB4]
gi|390614093|gb|AFM15243.1| ATP-dependent chaperone ClpB [Mycobacterium chubuense NBB4]
Length = 856
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/871 (52%), Positives = 606/871 (69%), Gaps = 44/871 (5%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + AT+AG+ Q TP HL +ALL+ GI A + G E A
Sbjct: 4 FNP---TTKTQAALTSALQAATAAGNPQITPAHLLMALLTQNDGIAAPLLEAVGVEPATV 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
AE + + +LP+ T + + + + I AQ D +++ + L++GL
Sbjct: 61 RAET--QRLLDRLPTATGSSTQPQLAPQSVAAITAAQHLATEMDDEYVSTEHLMVGLAGG 118
Query: 120 --------DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL 171
D+ + L G + ++ K+RG +V + + ++QAL+ Y DL
Sbjct: 119 LGGSAAAGDTDVAKLLTGHGASPQALREAFVKVRGSA--RVTNPDPEGSYQALEKYSTDL 176
Query: 172 VEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDV 229
+A G+LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDV
Sbjct: 177 TARAREGELDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDV 236
Query: 230 PSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGR 289
P +L D +I+LD+G++VAGAKYRGEFEERLKAVL +++ + G++I FIDE+H ++GAG
Sbjct: 237 PESLRDKTVISLDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGA 296
Query: 290 T-EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTV 348
T E +MDA N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV V EPSV DTV
Sbjct: 297 TGESAMDAGNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTV 356
Query: 349 SILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDS 408
ILRGLKE+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS
Sbjct: 357 GILRGLKERYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDS 416
Query: 409 QPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKE 468
+P EID +ER +LEIE AL KE+D ASK RL ++R EL D ++KL L R++ EK
Sbjct: 417 RPVEIDEVERLVRRLEIEEMALAKEEDVASKERLEKLRSELADHKEKLSELTTRWQNEKS 476
Query: 469 RIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLEGNQSDENLM 527
ID +R LK++ EEL A AER DLA+AA+LRYG I EVE + L ++ E++M
Sbjct: 477 AIDVVRELKERLEELRGAADRAERDGDLAKAAELRYGRIPEVEKKLDAALPHAEAREDVM 536
Query: 528 LTETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLR 576
L E VGPD IA+VVS WTGIP R+ + E +R++G +AV AV+++V R
Sbjct: 537 LKEEVGPDDIADVVSAWTGIPAGRMLEGETAKLLRMEEELGKRVVGQRKAVQAVSDAVRR 596
Query: 577 SRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRL 636
SRAG+ P +PTGSF+FLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RL
Sbjct: 597 SRAGVADPNRPTGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARL 656
Query: 637 IGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRT 696
+GAPPGYVG+++GGQLTEAVRRRPY+V+LFDE+EKAH VF+ LLQVLD+GRLTDGQGRT
Sbjct: 657 VGAPPGYVGYDQGGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRT 716
Query: 697 VDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
VDFRNT++I+TSNLG+ + +QV+ VR F+PE +NRLD+++VF
Sbjct: 717 VDFRNTILILTSNLGSGG-------------SEEQVMAAVRSAFKPEFINRLDDVIVFHG 763
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L +L + +Q++ +A RLA+R + L V+ A + +DP+YGARP+RR L++ +
Sbjct: 764 LEPGELVSIVDIQLQQLAKRLAQRRLTLEVSLPAKQWLAQHGFDPVYGARPLRRLLQQAI 823
Query: 817 VTELSRMLVREEIDENSTVYIDASPKGDNLV 847
+L++ML+ ++ + V ++ SP+GD+LV
Sbjct: 824 GDQLAKMLLAGDVHDGDVVPVNVSPEGDHLV 854
>gi|325662250|ref|ZP_08150865.1| chaperone ClpB 2 [Lachnospiraceae bacterium 4_1_37FAA]
gi|325471502|gb|EGC74723.1| chaperone ClpB 2 [Lachnospiraceae bacterium 4_1_37FAA]
Length = 865
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/857 (50%), Positives = 607/857 (70%), Gaps = 27/857 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + +A+ ++A G+ + HL AL+ + A I G +
Sbjct: 1 MNINKFTQNSLQAVQGCEKVAYEYGNQEVEQEHLLYALIIQNDSLIANLIEKMGIQKQLF 60
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
S N+ + L +T ++ L K + A+ K GD +++V+ + L LL+
Sbjct: 61 S-----NRVEEGLRKRTKVQGGQLYIGQDLNKALIHAEDEAKQMGDEYVSVEHIFLSLLK 115
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ ++ +F+E G+ + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 116 YPNKELKAIFREFGITREGFLQALSTVRGNQ--RVTSDNPEATYDTLNKYGSDLVERARE 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA VEGLAQRIVRGDVP L +
Sbjct: 174 QKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAAVEGLAQRIVRGDVPEGLKN 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
++ ALDMGALVAGAKYRGEFEERLKAVL+EV+ ++G +ILFIDE+H ++GAG+T+G+MD
Sbjct: 234 KKIFALDMGALVAGAKYRGEFEERLKAVLEEVKNSDGNIILFIDELHTIVGAGKTDGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V D +SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVDEPTVEDAISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 ERYEVFHGVKITDSALVAAATLSNRYITDRFLPDKAIDLVDEACALIKTELDSMPTEMDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L R+ MQLEIE AL+KE D+ S+ RLV +++EL ++RD+ ++ EK ++ +++
Sbjct: 414 LRRRIMQLEIEEAALKKENDRLSQERLVHLQQELAEMRDEFAGKKAQWDNEKTSVERLQK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
++++ E++ +Q+A+R YDL +AA+L+YG + ++ + + E +++ L E+V
Sbjct: 474 IREEIEQVNQEIQKAQRSYDLEKAAELQYGRLPQLTKQLQEEEERVKGKSMTLVHESVTE 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D+IA ++SRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+
Sbjct: 534 DEIARIISRWTGIPVAKLNESERSKTLHLDEELHKRVIGQDEGVTKVTEAIIRSKAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAKALA+ LFDDE+ +VRIDMSEYME++SVSRLIGAPPGY
Sbjct: 594 PTKPIGSFLFLGPTGVGKTELAKALAQSLFDDESNMVRIDMSEYMEKYSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 654 VGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSN+G+ +LL G+ G++ + + V+ ++R HFRPE LNRLDEI++F PL+ +
Sbjct: 714 LIMTSNIGSTYLLDGIDENGEIKEE-SETLVMNDLRAHFRPEFLNRLDEIIMFKPLTKKD 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++ L ++D+ RL + V + +T+AA V+ Y+P+YGARP++R+L+K V T +
Sbjct: 773 IYEIVELLIQDLNKRLQDSQVKIELTEAAKQFVVDGGYEPMYGARPLKRFLQKNVETLAA 832
Query: 822 RMLVREEIDENSTVYID 838
++++ EI T+ ID
Sbjct: 833 KLILSGEIGAEDTILID 849
>gi|118476751|ref|YP_893902.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
thuringiensis str. Al Hakam]
gi|196044324|ref|ZP_03111560.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus 03BB108]
gi|225863123|ref|YP_002748501.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus 03BB102]
gi|229183474|ref|ZP_04310699.1| Chaperone protein clpB 1 [Bacillus cereus BGSC 6E1]
gi|118415976|gb|ABK84395.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
thuringiensis str. Al Hakam]
gi|196024963|gb|EDX63634.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus 03BB108]
gi|225789526|gb|ACO29743.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus 03BB102]
gi|228600058|gb|EEK57653.1| Chaperone protein clpB 1 [Bacillus cereus BGSC 6E1]
Length = 866
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/874 (52%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IAE+VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIAEIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|56552320|ref|YP_163159.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ZM4]
gi|384412584|ref|YP_005621949.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|56543894|gb|AAV90048.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ZM4]
gi|335932958|gb|AEH63498.1| ATP-dependent chaperone ClpB [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 864
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/871 (51%), Positives = 605/871 (69%), Gaps = 28/871 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K T + I A +A H + P HL ALL D G+ + I AGG+
Sbjct: 1 MNFEKLTDRAKGFIQSAQTVAIRLNHQRIAPEHLLKALLEDDQGMASGLIRRAGGD--PM 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPAS--TTLIKVIRRAQAAQKAHGDTHLAVDQLILG-- 116
A R + A+ K+PS + + P ++++ +A+ GD+++ V++L+L
Sbjct: 59 IAVRDTDAALAKIPSVSGSGANTPPGLDNDTVRLLDQAEQIATKAGDSYVTVERLLLAMT 118
Query: 117 LLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
L+ ++Q+G + K++G+ + + + +LR GR ++A+ + + ALK + RDL A
Sbjct: 119 LMPETQVGKILKDSGLKAEALNTAINELRS--GRTADTATAEDRYDALKKFARDLTAAAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRR ++IL+RRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP L
Sbjct: 177 EGKLDPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEGLR 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D L+ LDMG+L+AGAKYRGEFEERLK VL EV++++G++ILFIDE+H ++GAG+++G+M
Sbjct: 237 DRVLMGLDMGSLIAGAKYRGEFEERLKGVLDEVKQSDGQIILFIDEMHTLIGAGKSDGAM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KP LARG+L CIGATTL EY+KYVEKD A +RRFQ VYV EP+V DT+SILRGL
Sbjct: 297 DAGNLLKPALARGELHCIGATTLAEYQKYVEKDPALQRRFQPVYVGEPTVEDTISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KEKYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEEI+
Sbjct: 357 KEKYEAHHGVRITDAALVSAATLSNRYITNRFLPDKAIDLVDEAASRLRMEVDSKPEEIE 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
NL+R+ +QL+IE AL KE D AS+ RL + +L DL + L R+K E+++I
Sbjct: 417 NLDRRIIQLKIEREALLKENDDASRDRLATLEHDLSDLEQQSSELTTRWKNEQDKIKAEA 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
RLK+K ++ AL++AER DL +A ++ YG I ++E + + + + ML E V
Sbjct: 477 RLKEKLDQARIALEQAERSGDLTKAGEISYGIIPQLEKQLA--DAQNAAQGAMLREEVTS 534
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IA +VSRWTGIPV ++ + E+E+L IG +AV AV+ +V R+RAGL
Sbjct: 535 QDIASIVSRWTGIPVDKMLEGEREKLIHMEDWLGKRVIGQEDAVKAVSRAVRRARAGLQD 594
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL KALA LFDD+ +VRIDMSEYME+H+V+RLIGAPPGY
Sbjct: 595 PSRPIGSFLFLGPTGVGKTELTKALASFLFDDDRAMVRIDMSEYMEKHAVARLIGAPPGY 654
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 655 VGYEEGGVLTEAVRRRPYQVILFDEVEKAHQDVFNILLQVLDDGRLTDGQGRTVDFSNTL 714
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
II+TSNLGA++ L+ + ++ +V++ VR HFRPE LNRLDEI++F L +
Sbjct: 715 IILTSNLGAQY-LANLGEDEPVESVEPKVMEVVRAHFRPEFLNRLDEIILFHRLGQSHMG 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ + LA+R + L ++D A + YDP+YGARP+RR ++K + L+
Sbjct: 774 PIVDIQVQHLCRLLADRKITLKLSDKARAWLGRVGYDPVYGARPLRRAVQKYLQDPLAED 833
Query: 824 LVREEIDENSTVYIDASPKGD-NLVYRVQKN 853
L++ I + TV +D +GD +L+++ + +
Sbjct: 834 LLKGTIRDGQTVDVD---EGDSHLIFKTEDS 861
>gi|296284569|ref|ZP_06862567.1| ATP-dependent Clp protease [Citromicrobium bathyomarinum JL354]
Length = 859
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/855 (52%), Positives = 599/855 (70%), Gaps = 24/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN + FT + + A A H + TPLH+ LL D G+ A + AGG+
Sbjct: 1 MNLENFTDRAKGFLQSAQTTAIRLNHQRITPLHILKVLLDDSEGMAAGLVQRAGGDPV-- 58
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LG 116
AE+ + + ++P S + A ++V+ +AQ + GD+ + V++L+ L
Sbjct: 59 KAEQRVDDELGRIPAVSGSGAQASPGLDNDSVRVLDQAQQIAEKSGDSFVTVERLLVALA 118
Query: 117 LLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
L +S+ G + +AGV ++ + LRG GR +SA+ + + A++ Y RDL + A
Sbjct: 119 LASNSKAGGVLADAGVDAKALERAIADLRG--GRTADSANAEQAYDAMQKYARDLTQAAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRR V+IL+RRTKNNP LIGEPG GKTA+ EGLA RI GDVP +L
Sbjct: 177 DGKLDPVIGRDEEIRRTVQILARRTKNNPALIGEPGTGKTAIAEGLALRIANGDVPDSLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ ++G++ILFIDE+H ++GAG +EGSM
Sbjct: 237 NRTLMALDMGALIAGAKYRGEFEERLKAVLDEVKGSDGQIILFIDEMHTLIGAGASEGSM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA+NL KP L+RG+L CIGATTL+EY+KYVEKD A +RRFQ VY+ EPSV DT+SILRG+
Sbjct: 297 DASNLLKPALSRGELHCIGATTLDEYQKYVEKDPALQRRFQPVYIEEPSVEDTISILRGI 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KEKYE HHGVRI D A+V AAQLS RYI R +PDKAIDL+DEA + +R++++S+PEEI+
Sbjct: 357 KEKYELHHGVRITDGAIVAAAQLSNRYIQNRFMPDKAIDLMDEAASRIRMEVESKPEEIE 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
NL+R+ +QL+IE AL KE D ASK RL +R++L +L + L R++ E+++I
Sbjct: 417 NLDRRIIQLKIEEQALAKESDDASKERLENLREDLANLEQRSSELTTRWQGERDKIHAEA 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
R+K+ + L++A+R DLA+A +L+YG I E+E + + EG+ + N +L E V
Sbjct: 477 RIKEDLDAARLELEQAQRAGDLAKAGELQYGRIPELENKLKEAEGHTA--NALLREEVTE 534
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
+ IA VV+RWTGIPV R+ + E+++L IG AV AV+++V R+RAGL
Sbjct: 535 EDIAGVVARWTGIPVDRMLEGERDKLLKMEEVLGKRVIGQEAAVEAVSKAVRRARAGLKD 594
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL KALA+ LFDD+N +VRIDMSE+ME+H+V+RLIGAPPGY
Sbjct: 595 PGRPLGSFLFLGPTGVGKTELTKALAQFLFDDDNAMVRIDMSEFMEKHAVARLIGAPPGY 654
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTE+VRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGR VDF NT+
Sbjct: 655 VGYEEGGVLTESVRRRPYQVVLFDEVEKAHSDVFNVLLQVLDDGRLTDGQGRVVDFSNTL 714
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
II+TSNLG+++ LS M + QV+ VR HFRPE LNRLDEI++F LS E +
Sbjct: 715 IILTSNLGSQY-LSNMTDDQQVSDVEPQVMDVVRGHFRPEFLNRLDEIILFHRLSMENMA 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ LQ+ V LA+R + L +TDAA + YDP+YGARP++R +++ V L+
Sbjct: 774 PIVELQVARVQKLLADRKIELELTDAAKRWLGRVGYDPVYGARPLKRAVQRYVQDPLAER 833
Query: 824 LVREEIDENSTVYID 838
L++ EI + STV ID
Sbjct: 834 LLQGEIPDGSTVKID 848
>gi|222081552|ref|YP_002540916.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
gi|221726231|gb|ACM29320.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
Length = 870
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/861 (51%), Positives = 599/861 (69%), Gaps = 28/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MN +K+T + I A LAT G+ QFTPLH+ LL D G+ I+ +GG + A
Sbjct: 1 MNAEKYTDRARGFIQSAQSLATREGNQQFTPLHILKVLLDDSEGLAGGLIDRSGGNSRAI 60
Query: 60 -QSAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S E A+ KLP T A ++ + ++ A+ A + GD+ + V++L+ L
Sbjct: 61 LSSTE----DALVKLPKVTGAGAGQVYLAPETARLFTAAEQAAEKAGDSFVTVERLLQAL 116
Query: 118 LED--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
+ D + G L + GV ++ + + LR +GR +SAS + + ALK Y RDL + A
Sbjct: 117 VADKHGEAGKLLAQGGVNPQQLNAAINALR--KGRTADSASAENAYDALKKYARDLTQAA 174
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L
Sbjct: 175 RDSKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESL 234
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +L+ALD+GAL+AGAKYRGEFEERLKAVL+EV A G +ILFIDE+H ++GAG+T+G+
Sbjct: 235 KDKKLLALDLGALIAGAKYRGEFEERLKAVLQEVTSAAGGIILFIDEMHTLIGAGKTDGA 294
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V+V EP+V DT+SILRG
Sbjct: 295 MDASNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVFVPEPTVEDTISILRG 354
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKEKYE HHG+RI D ALV AA LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+
Sbjct: 355 LKEKYELHHGIRIADSALVAAATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEEL 414
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D+L+R+ ++ +IE AL+KE D SK+RL + +EL L L +++ EK ++ +
Sbjct: 415 DSLDREIIRRKIEQEALKKEADAGSKSRLKTLGEELTRLEKASADLTSKWQSEKGKLSDA 474
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVG 533
++++ + E+ L A+R + RA +L Y I E+E + +E + EN +TETV
Sbjct: 475 QKMRSELEQFRTELANAQRSGEYQRAGELAYSTIPELEKKLAAVEAS---ENSSITETVT 531
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
D IA+VVSRWTG+PV ++ + EK++L +G A+AV AV+ +V R+RAGL
Sbjct: 532 ADNIAQVVSRWTGVPVDKMLEGEKDKLLHMEEMLGKRVVGQAQAVRAVSTAVRRARAGLQ 591
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTELAKALAE +FDDE +VRIDMSE+ME+HSV+RLIGAPPG
Sbjct: 592 DPSRPIGSFMFLGPTGVGKTELAKALAEFMFDDETAMVRIDMSEFMEKHSVARLIGAPPG 651
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 652 YVGYDEGGVLTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNT 711
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IIMTSN+GAE+L++ G+ T V R +V+ VR H RPE LNR+D I++F L ++
Sbjct: 712 LIIMTSNIGAEYLVNQPEGEKTSMV-RGEVMTMVRAHLRPEFLNRIDAIILFHRLQKSEM 770
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++ +Q + L +R + L + + + +DP YGARP++R +++ V L+
Sbjct: 771 GQIVEIQFARLRKILDDRKIELTLDAKGRTWLADKGWDPAYGARPLKRVIQRYVQDPLAE 830
Query: 823 MLVREEIDENSTVYIDASPKG 843
M++ ++ + STV + A G
Sbjct: 831 MILAGDVRDGSTVKLSAGKDG 851
>gi|331086051|ref|ZP_08335134.1| chaperone ClpB 2 [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330406974|gb|EGG86479.1| chaperone ClpB 2 [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 865
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/857 (51%), Positives = 606/857 (70%), Gaps = 27/857 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + +A+ ++A G+ + HL AL+ + A I G +
Sbjct: 1 MNINKFTQNSLQAVQGCEKVAYEYGNQEVEQEHLLYALIIQNDSLIANLIEKMGIQKQLF 60
Query: 61 SAERVFNQAMKKLPSQTPAPD-EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
S N+ + L +T +I L K + A+ K GD +++V+ + L LL+
Sbjct: 61 S-----NRVEEGLRKRTKVQGGQIYIGQDLNKALIHAEDEAKQMGDEYVSVEHIFLSLLK 115
Query: 120 --DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ ++ +F+E G+ + +RG + +V S + + T+ L YG DLVE+A
Sbjct: 116 YPNKELKAIFREFGITREGFLQALSTVRGNQ--RVTSDNPEATYDTLNKYGSDLVERARE 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD EIR VVRILSR+TKNNPVLIGEPGVGKTA VEGLAQRIVRGDVP L +
Sbjct: 174 QKLDPVIGRDAEIRNVVRILSRKTKNNPVLIGEPGVGKTAAVEGLAQRIVRGDVPEGLKN 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
++ ALDMGALVAGAKYRGEFEERLKAVL+EV+ + G +ILFIDE+H ++GAG+T+G+MD
Sbjct: 234 KKIFALDMGALVAGAKYRGEFEERLKAVLEEVKNSAGNIILFIDELHTIVGAGKTDGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V D +SILRGLK
Sbjct: 294 AGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVDEPTVEDAISILRGLK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HGV+I D ALV AA LS RYIT R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 354 ERYEVFHGVKITDSALVAAATLSNRYITDRFLPDKAIDLVDEACALIKTELDSMPTEMDE 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L R+ MQLEIE AL+KE D+ S+ RLV +++EL ++RD+ ++ EK ++ +++
Sbjct: 414 LRRRIMQLEIEEAALKKENDRLSQERLVHLQQELAEMRDEFAGKKAQWDNEKTSVERLQK 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVGP 534
++++ E++ +Q+A+R YDL +AA+L+YG + ++ + + E +++ L E+V
Sbjct: 474 IREEIEQVNQEIQKAQRSYDLEKAAELQYGRLPQLTKQLQEEEERVKGKSMTLVHESVTE 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D+IA ++SRWTGIPV +L ++E+ +R+IG E V V E+++RS+AG+
Sbjct: 534 DEIARIISRWTGIPVAKLNESERSKTLHLDEELHKRVIGQDEGVTKVTEAIIRSKAGIKD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAKALA+ LFDDE+ +VRIDMSEYME++SVSRLIGAPPGY
Sbjct: 594 PTKPIGSFLFLGPTGVGKTELAKALAQSLFDDESNMVRIDMSEYMEKYSVSRLIGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 654 VGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTI 713
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IMTSN+G+ +LL G+ G++ + + V+ ++R HFRPE LNRLDEI++F PL+ +
Sbjct: 714 LIMTSNIGSTYLLDGIDENGEIKEE-SETLVMNDLRAHFRPEFLNRLDEIIMFKPLTKKD 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++ L ++D+ RL + V + +T+AA V+ Y+P+YGARP++R+L+K V T +
Sbjct: 773 IYEIVELLIQDLNKRLQDSQVKIELTEAAKQFVVDGGYEPMYGARPLKRFLQKNVETLAA 832
Query: 822 RMLVREEIDENSTVYID 838
++++ EI T+ ID
Sbjct: 833 KLILSGEIGAEDTILID 849
>gi|95931190|ref|ZP_01313912.1| ATPase AAA-2 [Desulfuromonas acetoxidans DSM 684]
gi|95132752|gb|EAT14429.1| ATPase AAA-2 [Desulfuromonas acetoxidans DSM 684]
Length = 866
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/857 (51%), Positives = 607/857 (70%), Gaps = 24/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T + +A+ A +LA GHA+ HL VALL P G+ + + Q
Sbjct: 2 MQRDQLTRNSQQALQAARQLALDRGHAEIDAEHLFVALLQQPDGLVPNLLGKLSIK--PQ 59
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ + +K P + P D + S L K++ AQ +A D +++V+ L+LGL
Sbjct: 60 EVHQQLEKILKARPQISGPGHDNVYLSPRLDKLLTVAQREAEALKDDYISVEHLLLGLSS 119
Query: 120 D---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
D S +G L + R+ + ++RG + +V S ++T+Q L+ YGRDLV
Sbjct: 120 DDKKSPLGQLCARLELTKKRLLEVLAEVRGHQ--RVTSEDPESTYQVLEKYGRDLVAAVR 177
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD+EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP +
Sbjct: 178 DGKLDPVIGRDDEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPDGMR 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + ALDMGAL+AGAKYRGEFEERLKAVL E+ ++G+++LFIDE+H ++GAG+TEG+M
Sbjct: 238 DKTIFALDMGALIAGAKYRGEFEERLKAVLNEIRSSDGRILLFIDELHTIVGAGKTEGAM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR ++EKDAA ERRFQ V V +P+V D++SILRGL
Sbjct: 298 DAGNMLKPMLARGELHCIGATTLDEYRSHIEKDAALERRFQPVMVTQPTVEDSISILRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV+IQD+ALV AA LS RYI+ R LPDKAIDLVDEACA VR ++DS P +D
Sbjct: 358 KERFEVHHGVKIQDQALVAAATLSQRYISERFLPDKAIDLVDEACAMVRTEIDSMPAAMD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
R+ MQLEIE AL KEKD ASK RL +++EL + + + ++ EK + +I+
Sbjct: 418 TAARRVMQLEIEEAALVKEKDAASKERLKALQEELAEQKHIVDSFRAQWDVEKAGLQKIQ 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTET 531
+L+++ E+ L AER YDL AA++R+G + ++E + LE G + + +L E+
Sbjct: 478 QLREQIEQANLQLAAAERDYDLNTAAEIRHGRLPQLEQQLADLEHDAGERPEGQRLLHES 537
Query: 532 VGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAG 580
VG D+IA +V+RWTGIP+ R+ G+ EK ER+IG EAV V+++V+R+RAG
Sbjct: 538 VGADEIAGIVARWTGIPMERMLEGEREKLLKLDEHLHERVIGQDEAVQLVSDAVIRARAG 597
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P++P GSF+FLGPTGVGKTELA+ALA LFD E +VRIDMSEYME+HS+SRL+GAP
Sbjct: 598 IKDPKRPMGSFIFLGPTGVGKTELARALAAALFDSEEHMVRIDMSEYMEKHSISRLVGAP 657
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG++EGGQLTEAVRRRP+SVVLFDE+EKAH +FN LLQ++DDGR+TD GRTVDF+
Sbjct: 658 PGYVGYDEGGQLTEAVRRRPFSVVLFDEIEKAHPDIFNVLLQIMDDGRVTDSHGRTVDFK 717
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NTVIIMTSN+G+E+LL G + R V+ ++R++FRPE LNR+D+ V+F PL E
Sbjct: 718 NTVIIMTSNIGSEYLLQDEGGDEVSEATRQAVMGQLRQNFRPEFLNRVDDTVLFQPLQRE 777
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
QL ++ LQ+ ++ RLA+R + + + AA +V +YDP YGARP++R+L+ ++ T +
Sbjct: 778 QLAQIIDLQVAELQQRLADRRITIHLDAAAKQLVCDRAYDPHYGARPLKRFLQHELETRI 837
Query: 821 SRMLVREEIDENSTVYI 837
R ++ E+ E+ST+ +
Sbjct: 838 GRAIIAGEVLEDSTIAV 854
>gi|159186054|ref|NP_356471.2| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
fabrum str. C58]
gi|54035788|sp|Q7CU92.2|CLPB_AGRT5 RecName: Full=Chaperone protein ClpB
gi|159141188|gb|AAK89256.2| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
fabrum str. C58]
Length = 874
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/877 (50%), Positives = 595/877 (67%), Gaps = 23/877 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK++ + + A A + H QF+P H+ LL D G+ A I AGG+ A+
Sbjct: 1 MNIDKYSERVRGFLQSAQTFALAENHQQFSPEHVLKVLLDDEQGMAASLIERAGGD--AK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A + A+ KLP + + + L KV A+ K GD+ + V++L+ L +
Sbjct: 59 EARLANDAALAKLPKVSGGNGGLSLTAPLAKVFSTAEDLAKKAGDSFVTVERLLQALAIE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ K+AG + + +R +GR +SA+ + F ALK Y RDL E+A G
Sbjct: 119 SSASTSASLKKAGATAQALNQVINDIR--KGRTADSANAEQGFDALKKYARDLTEEAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
+LDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 RLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ G +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 KLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGGIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVLVDEPNVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+D L
Sbjct: 357 KYEQHHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL++E D++S RL ++ EL D +K L R++ EK+++ L
Sbjct: 417 DRRIIQLKIEREALKQETDQSSVDRLRKLEDELADTEEKADALTARWQAEKQKLGHAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG-NQSDENLMLTETVGPD 535
K++ +E L A+R RA +L YG I +E + E + S M+ E V PD
Sbjct: 477 KKRLDEARNELAIAQRNGQFQRAGELTYGIIPGLEKELAAAEARDSSGAGSMVQEVVTPD 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA VVSRWTGIPV ++ + ++E+L +G EAV AV+++V RSRAGL P
Sbjct: 537 NIAHVVSRWTGIPVDKMLEGQREKLLRMEDELAKSVVGQGEAVQAVSKAVRRSRAGLQDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL K+LA LFDDE +VR+DMSEYME+HSV+RLIGAPPGYV
Sbjct: 597 NRPIGSFIFLGPTGVGKTELTKSLARFLFDDETAMVRLDMSEYMEKHSVARLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+I
Sbjct: 657 GYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTII 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E ++ M + R+ V++ VR HFRPE LNR+D+I++F L +++
Sbjct: 717 IMTSNLGSE-FMTQMGDNDDVDSVRELVMERVRSHFRPEFLNRIDDIILFHRLRRDEMGA 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+K + LA+R + L + + A + + YDP YGARP++R ++K V L+ M+
Sbjct: 776 IVEIQLKRLVSLLADRKITLELDEDARSWLANKGYDPAYGARPLKRVIQKSVQDRLAEMI 835
Query: 825 VREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAAT 861
+ EI + S V + + D L+++V+ G + T
Sbjct: 836 LGGEIPDGSRVKVTSGT--DRLLFKVKPAKGEAETET 870
>gi|46199425|ref|YP_005092.1| endopeptidase Clp ATP-binding chain B, clpB [Thermus thermophilus
HB27]
gi|54035771|sp|Q72IK9.1|CLPB_THET2 RecName: Full=Chaperone protein ClpB
gi|46197050|gb|AAS81465.1| endopeptidase clp ATP-binding chain B, clpB [Thermus thermophilus
HB27]
Length = 854
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/864 (52%), Positives = 609/864 (70%), Gaps = 30/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +++T EA+A A LA H HL LL D G+ + + AG + A
Sbjct: 1 MNLERWTQAAREALAQAQVLAQRMKHQAIDLPHLWAVLLKDEGGLAWRLLEKAGADPKA- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ + + + +LP A ++ L + RA+A + D ++AVD L+L L E
Sbjct: 60 -LKELQERELSRLPKVEGAEVGQYLTSRLSGALNRAEALMEELKDRYVAVDTLVLALAEA 118
Query: 121 SQIGDLFKEAGV-AVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ G+ + +K +++LRG GR V++ ++T+ AL+ YG DL A GK
Sbjct: 119 T--------PGLPGLEALKGALKELRG--GRTVQTEHAESTYNALEQYGIDLTRLAAEGK 168
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRV++IL RRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L R
Sbjct: 169 LDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKR 228
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+++L MG+L+AGAKYRGEFEERLKAV++EV +++G+VILFIDE+H V+GAG+ EG++DA
Sbjct: 229 IVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAG 288
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+LR IGATTL+EYR+ +EKD A ERRFQ VYV EP+V +T+SILRGLKEK
Sbjct: 289 NMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTVEETISILRGLKEK 347
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D A++ AA LS RYIT R LPDKAIDL+DEA A +R+ L+S PEEID LE
Sbjct: 348 YEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALE 407
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK++QLEIE AL+KEKD S+ RL + E+ L +++ L +++E+E + ++R +
Sbjct: 408 RKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQ 467
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ +E+ ++ AER+YDL RAA+LRYG + ++EA + L + E D I
Sbjct: 468 HRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEED-I 526
Query: 538 AEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
AE+VSRWTGIPV++L + E+ +R++G EA+ AVA+++ R+RAGL P +
Sbjct: 527 AEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNR 586
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTELAK LA LFD E ++RIDM+EYME+H+VSRLIGAPPGYVG+
Sbjct: 587 PIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGY 646
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTD GRTVDFRNTVII+
Sbjct: 647 EEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIIL 706
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG+ +L G+ + RD+V + +++HFRPE LNRLDEIVVF PL+ EQ+R++
Sbjct: 707 TSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIV 766
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q+ + RLAE+ ++L +T+AA D + YDP++GARP+RR +++++ T L++ ++
Sbjct: 767 EIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILA 826
Query: 827 EEIDENSTVYIDASPKGDNLVYRV 850
E+ E V +D P G LV+ V
Sbjct: 827 GEVKEGDRVQVDVGPAG--LVFAV 848
>gi|422810287|ref|ZP_16858698.1| ClpB protein [Listeria monocytogenes FSL J1-208]
gi|378751951|gb|EHY62539.1| ClpB protein [Listeria monocytogenes FSL J1-208]
Length = 866
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/864 (50%), Positives = 615/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + H+ LL++ FA+ + + E
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESD--FAKRVYDVA-EVDID 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++ A+ K+P S + S L +++R A+ QK D ++ + LIL ++
Sbjct: 58 ALQKTVEDALTKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQKQLEDDFVSTEHLILAVM 117
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K + +++ + K+RG G+KV S + + ++AL YGRDLV +
Sbjct: 118 DQKSNPITMNLKNQHKSKKQIQEAILKIRG--GKKVTSQNAEENYEALTKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEILQRELADYKEEANQMKSKWEAEKNEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I V + + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGKIPAVEKELLELEAENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADELHRKVIGQDDAVQLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYVGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEITITISDDAKVFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID + K
Sbjct: 835 PLAREIVSGKIMPHSSVEIDLADK 858
>gi|241206499|ref|YP_002977595.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860389|gb|ACS58056.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 866
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/868 (52%), Positives = 599/868 (69%), Gaps = 22/868 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ + I A A + GH QFTP H+ LL D G+ A I AGG+ A+
Sbjct: 1 MNIEKYSERVRGFIQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGGD--AK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+A + A+ KLP + I + L KV+ A+ A K GD+ + V++L+ L +
Sbjct: 59 AARLANDAALAKLPKISGGNGNIYLAQPLAKVLSTAEEAAKKAGDSFVTVERLLQALAIE 118
Query: 121 SQIGDL--FKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
S K AGV + + +R +GR +S++ + F +LK + RDL +A G
Sbjct: 119 SSASTFSTLKNAGVTAQGLNQVINDIR--KGRTADSSNAEQGFDSLKKFARDLTAEAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ G++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 KLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVVVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYIT R LPDKAIDL+DEA A +R+Q+DS+PEE+D L
Sbjct: 357 KYEQHHKVRIADAALVAAATLSNRYITDRFLPDKAIDLMDEAAARLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+KE D AS RL + E+ DL ++ L R++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKKETDVASADRLKRLETEVTDLEEQADALTARWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ ++ L A+R+ + RA +L YG I ++E + E D M+ E V PD
Sbjct: 477 KKQLDDARNELAIAQRKGEFQRAGELTYGVIPDLEKQLVDAEKQDGDRGAMVQEVVTPDN 536
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA +VSRWTGIPV R+ + E+++L IG +AV AV+ +V R+RAGL P
Sbjct: 537 IAHIVSRWTGIPVDRMLEGERDKLLRMEDELAKSVIGQGDAVQAVSRAVRRARAGLQDPN 596
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDDE +VR+DMSEYME+HSV+RLIGAPPGYVG
Sbjct: 597 RPIGSFIFLGPTGVGKTELTKALARFLFDDETAMVRMDMSEYMEKHSVARLIGAPPGYVG 656
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 657 YDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTMII 716
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L G + V R+QV++ VR HFRPE LNR+DEI++F L E++ +
Sbjct: 717 MTSNLGAEYLTQLRDGDDSDTV-REQVMEVVRGHFRPEFLNRIDEIILFHRLKREEMGAI 775
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+K + L+ER + + + + A + + YDP+YGARP++R ++K V L+ ++
Sbjct: 776 VDIQLKRLVALLSERKIIIDLDEEARHWLANKGYDPVYGARPLKRVIQKFVQDPLAEQIL 835
Query: 826 REEIDENSTVYIDASPKGDNLVYRVQKN 853
++ + STV + + D L +R ++
Sbjct: 836 SGQVPDGSTVTVTSG--SDRLQFRTRQT 861
>gi|85707682|ref|ZP_01038748.1| ATP-dependent Clp protease [Erythrobacter sp. NAP1]
gi|85689216|gb|EAQ29219.1| ATP-dependent Clp protease [Erythrobacter sp. NAP1]
Length = 858
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/854 (51%), Positives = 592/854 (69%), Gaps = 23/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + + A +A H + TPLHL ALL D G+ A I AGGE A
Sbjct: 1 MNLEKFTDRAKGFLQSAQTVAIRMNHQRITPLHLLKALLEDEEGMAAGLIQRAGGE--AG 58
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGL- 117
A + + K+P T P ++V+ A+ GD ++ V++L+ L
Sbjct: 59 LAVSAVDIGLSKIPQVTGSGAQSTPGLDNDAVRVLDSAEQLADKAGDAYVTVERLLTALA 118
Query: 118 LEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
L G+ K A V + + +E LRG GRK +SA+ ++ + A++ + RDL + A
Sbjct: 119 LASGSTGEAMKAASVTPQSLNAAIEDLRG--GRKADSANAESNYDAMEKFARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR ++IL+RRTKNNP +IGEPG GKTA+ EGLA RI GDVP +L
Sbjct: 177 GKLDPVIGRDEEIRRTIQILARRTKNNPAIIGEPGTGKTAIAEGLALRIANGDVPDSLKG 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
L++LDMGAL+AGAKYRGEFEERLK++L EV A+G +ILFIDE+H ++GAG +EGSMD
Sbjct: 237 RTLMSLDMGALIAGAKYRGEFEERLKSILDEVRHADGNIILFIDEMHTLIGAGASEGSMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP L+RG+L CIGATTL+EY+KYVEKD A +RRFQ VY+ EP+V DTVSILRG+K
Sbjct: 297 ASNLLKPALSRGELHCIGATTLDEYQKYVEKDPALQRRFQPVYIEEPTVEDTVSILRGIK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D A+V AA+LS RYI R LPDKAIDL+DEA + +R++++S+PEEI+
Sbjct: 357 DKYELHHGVRITDTAIVAAAKLSDRYIQNRFLPDKAIDLMDEAASRIRMEVESKPEEIEA 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE ALEKE D ASK RL + KEL +L + L R++ E+++I+ +
Sbjct: 417 LDRRIIQLKIEESALEKEDDTASKDRLANLLKELAELEQESSELTTRWQNERDKIEAEGK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
+K++ + L++A+R DLA+A +L YG I ++E + E EN +L E V +
Sbjct: 477 IKEELDAAKLELEQAQRSGDLAKAGELSYGTIPDLEKKLAAAE--DLTENALLREEVTEE 534
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA VVSRWTGIP+ ++ + E+E+L IG ++A+ AV+++V R+RAGL P
Sbjct: 535 DIASVVSRWTGIPIDKMMEGEREKLLEMESIIGKRVIGQSQAIEAVSKAVRRARAGLQDP 594
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTEL KALAE LFDD+ LVRIDMSE+ME+HSV+RLIGAPPGYV
Sbjct: 595 NRPLGSFLFLGPTGVGKTELTKALAEFLFDDDQALVRIDMSEFMEKHSVARLIGAPPGYV 654
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDG LTDGQGR VDF NT+I
Sbjct: 655 GYDEGGVLTEAVRRRPYQVVLFDEVEKAHTDVFNVLLQVLDDGHLTDGQGRKVDFSNTLI 714
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSNLG++H LS + + DQV+ VR HFRPE LNRLDEI++F L+ E +
Sbjct: 715 ILTSNLGSQH-LSNLGDDQKVADVEDQVMDVVRGHFRPEFLNRLDEIILFHRLAMEHMAP 773
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+K V L +R + L +TDAAL + YDP+YGARP++R +++ + L+ ML
Sbjct: 774 IVEIQVKRVQKLLDDRKITLELTDAALRWLGRVGYDPVYGARPLKRAVQRYLQDPLAEML 833
Query: 825 VREEIDENSTVYID 838
++ + + T+ +D
Sbjct: 834 IQGNVSDGVTLKVD 847
>gi|415706171|ref|ZP_11461245.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 0288E]
gi|388055063|gb|EIK77984.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 0288E]
Length = 864
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/867 (51%), Positives = 611/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + A +AG+AQ LHLA ALL G+ I AG + AE
Sbjct: 4 KFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIGAE- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-- 121
A+ LPS T + P AS L+ + +A+ +A GD +++ + +++G++ +
Sbjct: 63 -IRNALVALPSSTGSTTTKPDASRQLLTALSQAEKEMRAMGDEYVSTEHMLIGIVASAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 122 AVADIFKKHNVSADALRKAVPTVRG--GAKVTSPDAEGNYKALEKYSVDMTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVL+E+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 240 SLDLASMVAGSKYRGEFEERLKAVLREIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EYR+++EKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 300 LKPMLARGELRLVGATTLNEYREHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A+K RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDAAAKERLEKLQEELANSREKLTGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E ++ E + PDQ
Sbjct: 480 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESEAANAKSEAKEPMVPDQVDA 539
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 540 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 600 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 660 IGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PLS E+L
Sbjct: 720 LIMTSNLGSQFLVQEGLDDAA---KRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELG 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ VA RL++R ++L V+D+A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 777 GIVDIQVRQVAARLSDRRISLDVSDSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 836
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + V D D++ ++
Sbjct: 837 LLSGKVHDGARVVADCENTSDHVTLKI 863
>gi|89098078|ref|ZP_01170964.1| ClpB protein [Bacillus sp. NRRL B-14911]
gi|89087241|gb|EAR66356.1| ClpB protein [Bacillus sp. NRRL B-14911]
Length = 866
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/856 (50%), Positives = 600/856 (70%), Gaps = 24/856 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T + + A A H + HL ++L+ + + + AG +A+
Sbjct: 1 MDLNKMTERMQQGFLNAQSKAAIMQHQEVDEAHLFLSLMEQEDSLVSTILERAGA--SAK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S ++ + P + E + + L +++ A+ + D +L+ + L+L
Sbjct: 59 SFSSGLEDSLARKPQVSGGGAEQGKLYITAALQRLLAEAEKMMQELEDLYLSAEHLMLAA 118
Query: 118 LE-DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ +Q G L G + + + +RG + KV S + + +++ALK YGRDLV +
Sbjct: 119 VRGKTQAGKLLAGIGAGFEELNTAIMAIRGNQ--KVTSQNPEASYEALKKYGRDLVAEVK 176
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
AGK+DPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 177 AGKVDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRRDVPEGLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + +LDM +LVAGAK+RGEFEERLKAVL EV+++EG+++LFIDE+H ++GAG+TEG+M
Sbjct: 237 DKTIFSLDMSSLVAGAKFRGEFEERLKAVLNEVKKSEGRILLFIDELHTIVGAGKTEGAM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL E+RKY+EKD A ERRFQQV V+EP V D++SILRGL
Sbjct: 297 DAGNMLKPMLARGELHCIGATTLNEHRKYIEKDPALERRFQQVLVSEPDVEDSISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I DRALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E+D
Sbjct: 357 KERFEIHHGVNIHDRALVAAAALSDRYITDRFLPDKAIDLVDEACAMIRTEIDSMPAELD 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ MQLEIE ALEKE D +S+ RL ++KEL L++K + +++ EKE I +++
Sbjct: 417 EVSRRVMQLEIEEAALEKESDDSSRERLEALQKELAGLKEKAYSMKTKWELEKEAIQKVQ 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN--LMLTETV 532
+++ E+ LQEAE YDL +AA+LR+G+I +E + +LE + + +L E V
Sbjct: 477 EKREQLEKYRLDLQEAENNYDLNKAAELRHGSIPALEKELKKLESEEGERQGERLLREEV 536
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
D+IA +V+RWTGIPVT+L + E+E+L IG EAV+ VA++VLR+RAG+
Sbjct: 537 TEDEIAGIVARWTGIPVTKLVEGEREKLLKLEDTLHQRVIGQEEAVSLVADAVLRARAGI 596
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTELAKALA LFD+E L+RIDMSEYME+H+VSRLIGAPP
Sbjct: 597 QDPNRPIGSFIFLGPTGVGKTELAKALAHSLFDNEEQLIRIDMSEYMEKHAVSRLIGAPP 656
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVDF+N
Sbjct: 657 GYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNVLLQMLDDGRVTDSQGRTVDFKN 716
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
TVIIMTSN+G+ +LL G+ + RD+V+ E+R FRPE LNR+DE+++F PLS
Sbjct: 717 TVIIMTSNIGSAYLLE-QAGEEIPEETRDRVMTELRSRFRPEFLNRVDEMILFKPLSLGD 775
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
++ + M D+ RL ++ + +++ D A + + +DP+YGARP++R++++ + T L+
Sbjct: 776 IKGIVGKLMLDLQRRLEDQHIKISIKDEAKEYIAQNGFDPVYGARPLKRFIQRNIETRLA 835
Query: 822 RMLVREEIDENSTVYI 837
+ ++ I +NS+V I
Sbjct: 836 KEIISGRIRDNSSVEI 851
>gi|359397950|ref|ZP_09190975.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Novosphingobium pentaromativorans US6-1]
gi|357600836|gb|EHJ62530.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Novosphingobium pentaromativorans US6-1]
Length = 859
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/854 (53%), Positives = 593/854 (69%), Gaps = 24/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + + A +A H + + H+ ALL DP G+ A I AGG Q
Sbjct: 1 MNLEKFTDRAKGFLQAAQTVAIRLNHQRISSEHILKALLDDPEGMAAGLIKRAGGN--PQ 58
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A ++A+ K+P S + A ++V+ A+ A GD+ + V++L+L L+
Sbjct: 59 FATDELDKALAKVPVVSGSGAQGAPGLDNDAVRVLDAAEQAATKSGDSFVTVERLLLALV 118
Query: 119 EDSQI--GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
S G K A V +++ + +LRG GR +SA + + A+K Y RDL E A
Sbjct: 119 LASTTPAGQALKAANVTAQALEAAITELRG--GRTADSAGAENAYDAMKKYARDLTEAAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRR V+IL+RRTKNNPVLIG+PGVGKTA+ EGLA RI GDVP +L
Sbjct: 177 EGKLDPVIGRDEEIRRTVQILARRTKNNPVLIGDPGVGKTAIAEGLALRIANGDVPDSLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D RL+ALDMGAL+AGAKYRGEFEERLKAVL EV+ AEG +ILFIDE+H ++GAG +EGSM
Sbjct: 237 DRRLMALDMGALIAGAKYRGEFEERLKAVLDEVKGAEGDIILFIDEMHTLIGAGASEGSM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KP LARG+L CIGATTL+EY+KYVEKDAA +RRFQ V+V EP+V DT+SILRGL
Sbjct: 297 DAGNLLKPALARGELHCIGATTLDEYQKYVEKDAALQRRFQPVFVGEPTVEDTISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KEKYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA + +R++++S+PEEI+
Sbjct: 357 KEKYELHHGVRITDGAIVAAATLSNRYITNRFLPDKAIDLMDEAASRIRMEVESKPEEIE 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L+R+ +QL+IE AL KE D+AS RL +R+EL +L + L R++ E+++I
Sbjct: 417 KLDRRIIQLKIEESALGKETDEASADRLRSLREELANLEQQSSELTTRWQNERDKIAAEG 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
+LK++ + L++A+R DLARA +L YG I +E + E N +L E V
Sbjct: 477 KLKEQLDAARLELEQAQRSGDLARAGELSYGTIPNLEKQLA--EAQDQSANALLREEVTE 534
Query: 535 DQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D IA VVSRWTG+PV ++ G+ EK ER+IG +AV AV+++V R+RAGL
Sbjct: 535 DDIAGVVSRWTGVPVDKMLEGEREKLLKMEQVIGERVIGQEQAVQAVSKAVRRARAGLQD 594
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL KALA LFDD++ +VRIDMSE+ME+H+V+RLIGAPPGY
Sbjct: 595 PNRPLGSFLFLGPTGVGKTELTKALAGFLFDDDSAMVRIDMSEFMEKHAVARLIGAPPGY 654
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGR VDF NT+
Sbjct: 655 VGYEEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRLVDFTNTL 714
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
II+TSNLG+++L GK ++ QV++ VR HFRPE LNRLDEI++F L + +
Sbjct: 715 IILTSNLGSQYLTQIEDGK-DVESVEPQVMEVVRAHFRPEFLNRLDEIILFHRLGQDHMG 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q+ V L +R + L +TDAA + YDP+YGARP++R +++ + L+
Sbjct: 774 PIVEIQVSRVQKLLKDRKIELDLTDAAKRWLGRVGYDPVYGARPLKRAVQRYLQDPLAEK 833
Query: 824 LVREEIDENSTVYI 837
L+ EI + STV I
Sbjct: 834 LLAGEIPDGSTVRI 847
>gi|319649991|ref|ZP_08004140.1| ClpB protein [Bacillus sp. 2_A_57_CT2]
gi|317398172|gb|EFV78861.1| ClpB protein [Bacillus sp. 2_A_57_CT2]
Length = 865
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/859 (50%), Positives = 605/859 (70%), Gaps = 24/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T + E + A +A H + HL +AL + + + ++ + A
Sbjct: 1 MDLNRMTERLQEGLLNAQSIAIREQHQEVDEAHLFLALTGQENSLISLLLSKM--QIPAN 58
Query: 61 SAERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S +A++K P + + ++ S L +++ A+ K + D ++V+ + +
Sbjct: 59 SFNNKMKEALRKKPQVSGSGMDQGKLYISGKLQRLLAEAENYMKIYQDEFMSVEHVFMAA 118
Query: 118 LEDSQIGDL-FKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ K G+ +V+ ++++RG + +V S + ++T++ALK YGRDLV +
Sbjct: 119 AAAETETAVVLKAYGINKEKVEQAIKEIRGNQ--RVTSQNPESTYEALKKYGRDLVAEVK 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GK+DPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 177 QGKVDPVIGRDSEIRHVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + ALDM AL+AGAK+RGEFEERLKAVL EV+++EG+++LFIDE+H ++GAG+TEG+M
Sbjct: 237 DKTIFALDMSALIAGAKFRGEFEERLKAVLNEVKKSEGRILLFIDELHTIVGAGKTEGAM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTLEE+RKY+EKD A ERRFQQV V EP V DT+SILRGL
Sbjct: 297 DAGNMLKPMLARGELHCIGATTLEEHRKYIEKDPALERRFQQVLVQEPDVEDTISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I DRA+V AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E+D
Sbjct: 357 KERFEIHHGVNIHDRAIVAAATLSDRYITDRFLPDKAIDLVDEACAMIRTEIDSMPSELD 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ MQLEIE AL KE D+ SK RL +++KEL +L+D+ + +++ EKE I +++
Sbjct: 417 EVTRRVMQLEIEEAALRKESDEGSKQRLADLQKELAELKDQANSMKAKWQLEKEGIQKVQ 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG--NQSDENLMLTETV 532
+++ E++ L+EAE YDL +AA+LR+G I +E + LE N++ +L E V
Sbjct: 477 EKREQLEKIRRELEEAENNYDLNKAAELRHGRIPSLERELKDLESAVNENQGERLLREEV 536
Query: 533 GPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGL 581
++IA +V+RWTGIPV +L G+ EK ER+IG EAV V+++VLR+RAG+
Sbjct: 537 TEEEIAGIVARWTGIPVVKLVEGEREKLLRLESILHERVIGQDEAVQLVSDAVLRARAGI 596
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTELAKALA+ LFD E ++RIDMSEYME+H+VSRLIGAPP
Sbjct: 597 KDPNRPIGSFIFLGPTGVGKTELAKALAQSLFDSEEQIIRIDMSEYMEKHAVSRLIGAPP 656
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVDF+N
Sbjct: 657 GYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKN 716
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
TVIIMTSN+G+ LL G+ + + R+ VL ++R HFRPE LNR+DEI++F PL+
Sbjct: 717 TVIIMTSNIGSHFLLERSSGEEDISEETRETVLGQLRSHFRPEFLNRVDEIILFKPLALN 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+++ + + + RL+++ + L++ D A + + +DP+YGARP++R++++ V T L
Sbjct: 777 EIKSIVLKLITQLQARLSDQHIKLSINDNAKEYIAENGFDPVYGARPLKRFIQRNVETAL 836
Query: 821 SRMLVREEIDENSTVYIDA 839
+R ++ EI + S V I A
Sbjct: 837 ARKIIAGEIKDYSEVVISA 855
>gi|294790548|ref|ZP_06755706.1| ATP-dependent chaperone protein ClpB [Scardovia inopinata F0304]
gi|294458445|gb|EFG26798.1| ATP-dependent chaperone protein ClpB [Scardovia inopinata F0304]
Length = 879
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/870 (51%), Positives = 603/870 (69%), Gaps = 44/870 (5%)
Query: 4 DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAE 63
+KFT EAI A + A++AG+ Q P+HL ALL G+ I G + A +
Sbjct: 5 EKFTTLAQEAIGDALQTASAAGNPQVEPIHLLDALLRQDGGVVKGLIKETGADPQAIGGD 64
Query: 64 RVFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-LEDS 121
+A+ LP+ + + P AS L V+ A+ + GD +++ + L++ L + +
Sbjct: 65 T--RRALVNLPAASGSSTTQPSASRQLSVVLSEAKNQMTSLGDDYISTEHLLIALAMGQN 122
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ G++ + AG + ++ V ++RG G +V S + T++AL+ Y DL EQA GKLD
Sbjct: 123 EAGEILRTAGASPEELRKAVPQVRG--GARVTSPDAEGTYKALEKYSTDLTEQAREGKLD 180
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQR+V GDVP+ L + +++
Sbjct: 181 PVIGRDAEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVAGDVPTGLKNKKIV 240
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LDM ++VAG+KYRGEFEER+KAVL E+++A G +I FIDEIH ++GAG TEGSMDA N+
Sbjct: 241 SLDMSSMVAGSKYRGEFEERMKAVLDEIKKANGTIITFIDEIHTIVGAGATEGSMDAGNM 300
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 301 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTVAILRGLKQRYE 360
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS+PEEID L+R+
Sbjct: 361 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSEPEEIDELQRR 420
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ EK +++ L+ K
Sbjct: 421 VTRLEMEEMQLKKAEDTASKERLEKIQSELADAREKLAGLNTRWSAEKADRNKVGDLRAK 480
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--------------QSDEN 525
+ L +A R +L A+ + YG I E++ + E +
Sbjct: 481 LDSLRVQADKATREGNLESASKILYGDIPEIQKQLAAAENTAKSAGSESGSESGSDHESE 540
Query: 526 LMLTETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESV 574
M+ + V D +A +VS WTGIPV RL G+NEK +R++G EAV AV+++V
Sbjct: 541 PMVPDHVDADSVASIVSSWTGIPVGRLMQGENEKLLTMEDQLSKRVVGQKEAVRAVSDAV 600
Query: 575 LRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVS 634
RSRAG+ P +PT SFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVS
Sbjct: 601 RRSRAGISDPDRPTASFLFLGPTGVGKTELAKALADFLFDDERAIVRIDMSEYMEKESVS 660
Query: 635 RLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQG 694
RLIGA PGY+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQG
Sbjct: 661 RLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQG 720
Query: 695 RTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQ----VLQEVRKHFRPELLNRLDE 750
RTVDF+NT++IMTSNLG++ L V M ++ +Q V+ V HF+PE +NRLD+
Sbjct: 721 RTVDFKNTILIMTSNLGSQFL-------VDMDLSPEQRHSAVMDAVHAHFKPEFINRLDD 773
Query: 751 IVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRR 810
+++F+PL+ ++L + +Q+ VA RL +R + L VTD+A + + YDP YGARP+RR
Sbjct: 774 LIIFNPLTRQELGSIVDIQVSRVAARLTDRRITLDVTDSAREWLADTGYDPAYGARPLRR 833
Query: 811 WLEKKVVTELSRMLVREEIDENSTVYIDAS 840
++ +V +L+RML+ ++ + TV +D +
Sbjct: 834 LVQSEVGDQLARMLLSGQVHDGDTVLVDQT 863
>gi|421450965|ref|ZP_15900333.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|396064558|gb|EJI72943.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
Length = 857
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/854 (51%), Positives = 592/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S+ L++V+ + GD ++ + +L LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLAMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ VL V ++FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ + ++AS
Sbjct: 836 GELVPGKVIRLEAS 849
>gi|269119999|ref|YP_003308176.1| ATP-dependent chaperone ClpB [Sebaldella termitidis ATCC 33386]
gi|268613877|gb|ACZ08245.1| ATP-dependent chaperone ClpB [Sebaldella termitidis ATCC 33386]
Length = 857
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/868 (48%), Positives = 607/868 (69%), Gaps = 36/868 (4%)
Query: 4 DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAE 63
+KFT K+ EAI+ AH A HL +AL+ G+ + + G +
Sbjct: 3 NKFTEKSVEAISEAHNYAVRYKSPDMKVEHLLLALVGQMEGLIPKLLQKMG-----INTS 57
Query: 64 RVFNQAMKKLPS----QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ N+ KL S + + D P + L +V+ +A+ K + D++++ + L L +
Sbjct: 58 NLINKLSAKLDSFSKVEGSSGDPRP-NVELNRVLVQAEDYMKKYHDSYISTEHLFLAAFD 116
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
++ + K + + ++ + +RG ++V++ + + ++ AL+ YG+DLVE A GK
Sbjct: 117 NN---NFLKANNINKDQFENVLADVRG--NKRVDNTTPENSYDALEKYGKDLVELARKGK 171
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DP+IGRD EIRR ++ILSRRTKNNP+LIGEPGVGKTA+ EG+AQRI++GDVP +L D
Sbjct: 172 IDPIIGRDTEIRRAIQILSRRTKNNPILIGEPGVGKTAIAEGIAQRILKGDVPESLKDKT 231
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+ +LDMG+L++GAKYRGEFEERLKAV+KE+E+++G++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 232 VFSLDMGSLISGAKYRGEFEERLKAVIKEIEDSDGRIILFIDEVHTIVGAGKGDGAMDAG 291
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KPMLARG + IGATT+EEYRKY+EKD A ERRFQ V V E SV DT+SILRGLKEK
Sbjct: 292 NLLKPMLARGDAKVIGATTIEEYRKYIEKDPALERRFQPVLVPESSVEDTISILRGLKEK 351
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
+E HG+RI D ALV AA +S RYI+ R LPDKAIDL+DEA A ++ ++DS P E+D +
Sbjct: 352 FETFHGIRITDNALVAAAVMSDRYISDRFLPDKAIDLIDEASAKIKTEIDSMPTELDEVT 411
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK +QLEIE AL+KEKDKAS+ RL + KEL DL +K L +++ EK +D ++++
Sbjct: 412 RKVLQLEIEREALKKEKDKASQDRLESLEKELADLNEKKSTLQSQWEAEKHEVDTLKKIN 471
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN---QSDENLMLTETVGP 534
++ +++ +QEAER YDL + A+L+YG + +E Q E + + D +L + +
Sbjct: 472 EEIDKVKLDIQEAERVYDLNKLAELKYGKLAALEKKKEQEEADLETKKDSARLLKQELDS 531
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
++IAEVV +WTGIPV++L + EK+ R++G EA+ A++++++RSRAGL
Sbjct: 532 EEIAEVVGKWTGIPVSKLMEGEKDKILHLEDHLKARVVGQDEAIKAISDTIIRSRAGLKD 591
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSF+FLGPTGVGKT LAK LA LFDDEN +VRIDMSEYM++ SV+RLIGAPPGY
Sbjct: 592 PNRPIGSFIFLGPTGVGKTYLAKTLAYNLFDDENNIVRIDMSEYMDKFSVTRLIGAPPGY 651
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RR+PYSV+LFDE+EKAH VFN LLQ+LDDGRLTDG+G+ VDF+N++
Sbjct: 652 VGYEEGGQLTEAIRRKPYSVILFDEIEKAHPDVFNVLLQLLDDGRLTDGKGKVVDFKNSI 711
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSNLG+ +L K Q RD V+ E++ FRPE LNR+D+ +VF L + ++
Sbjct: 712 IIMTSNLGSHLILEDPEMK---QETRDGVMNELKMRFRPEFLNRVDDTIVFKALDRDNVK 768
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ RL + D+ +L E+ + + TDAALD ++ E+YDP YGARP+RR+++K + T LS+M
Sbjct: 769 GIVRLVLDDINKKLKEQYMRIEYTDAALDFIVKEAYDPSYGARPLRRFVQKDIETNLSKM 828
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRVQ 851
++ E+ EN + ID+ G L Y +
Sbjct: 829 ILANEVKENDVILIDSD--GYTLSYNIN 854
>gi|316935949|ref|YP_004110931.1| ATP-dependent chaperone ClpB [Rhodopseudomonas palustris DX-1]
gi|315603663|gb|ADU46198.1| ATP-dependent chaperone ClpB [Rhodopseudomonas palustris DX-1]
Length = 879
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/855 (52%), Positives = 601/855 (70%), Gaps = 22/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A LA GH QF+PLH+ LL D G+ I+ AGG ++
Sbjct: 1 MNVEKYTERVRGFIQSAQSLAVREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGN--SR 58
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ + A+ K+P + ++ + A+ A + GD+ + V++L+L L
Sbjct: 59 AILKATEDALGKMPKVSGSGAGQVYLDPATARAFDAAEKAAEKAGDSFVTVERLLLALSL 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+DS+ G L + GV + + + LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 DKDSEAGKLLAKGGVTPQNLNAAINALR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV AEG +ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLALDMGALIAGAKYRGEFEERLKAVLNEVTTAEGGIILFIDEMHTLVGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ V+V EP+V DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVNEPTVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D A+V +A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRIADSAIVASATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L+IE AL+KE D SK RLV + KEL +L +K L R+ EK ++ ++
Sbjct: 417 MDREIVRLKIEQEALKKESDVGSKTRLVALEKELAELEEKSAVLTQRWSAEKNKLAGAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + RA +L YG I E+E + +E ++ + M+ E V D
Sbjct: 477 LKSELDGLRIELANAQRRGEYQRAGELAYGRIPELEKKLADIEAHE-NAGEMVEEAVTAD 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EKE+L +G EAV+AV+ +V R+RAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKEKLLRMEEQLGQRVVGQFEAVHAVSTAVRRARAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LFDDE +VRIDMSE+ME+HSV+RLIGAPPGYV
Sbjct: 596 NRPMGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDMSEFMEKHSVARLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
+MTSNLG+E+L++ G+ T V R+QV+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 VMTSNLGSEYLVNQPEGEDTGAV-REQVMGMVRAHFRPEFLNRVDEIILFHRLQKSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L +R + L + AA D + + +DP YGARP++R +++ V L+ M+
Sbjct: 775 IVDIQFARLTKLLEDRKIVLDLDAAARDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMI 834
Query: 825 VREEIDENSTVYIDA 839
+ + + V I A
Sbjct: 835 LEGSVKDGDHVAISA 849
>gi|344923863|ref|ZP_08777324.1| ATP-dependent Clp protease ATP-binding subunit [Candidatus
Odyssella thessalonicensis L13]
Length = 857
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/856 (53%), Positives = 594/856 (69%), Gaps = 31/856 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN D++T + + A LA GH Q TP HL LL DP G+ A+ + AGG NA
Sbjct: 1 MNQDRYTQRAQGMLQSAQMLAVREGHQQLTPFHLLKILLDDPEGLAAKMVTIAGG-NA-- 57
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLI-----KVIRRAQAAQKAHGDTHLAVDQLIL 115
++F+Q+++ ++ A+ + K + A+ A D + + L L
Sbjct: 58 ---KLFHQSVEAELAKIAKVSGAGAAGVYLAQETAKALDVAEKAADKMRDQFVTAEVLFL 114
Query: 116 GLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VE 173
GL L + AGV+ A++ + R +GR ++ + + TF AL Y RDL V
Sbjct: 115 GLCSVDPGKRLAEAAGVSAAKISEAIASFR--KGRTADTQNAEDTFDALNRYARDLTAVA 172
Query: 174 QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
+ GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP L
Sbjct: 173 REGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEAL 232
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
RL++LD+GAL+AGAKYRGEFEERLKAVL E+ A G ++LFIDE+H ++GAG++EG+
Sbjct: 233 KHTRLMSLDLGALIAGAKYRGEFEERLKAVLNEIANAAGDIVLFIDELHTLVGAGKSEGA 292
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA+N+ KP LARG+L C+GATTL+EYR+Y+EKDAA RRFQ V+V EP+V DT+SILRG
Sbjct: 293 MDASNMLKPALARGELHCVGATTLDEYRQYIEKDAALARRFQPVFVGEPTVEDTISILRG 352
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKEKYE HHGVRI D A+V A LS RYI+ R LPDKAIDL+DEA + VR+ +DS+PEEI
Sbjct: 353 LKEKYEIHHGVRISDNAIVAACTLSNRYISDRFLPDKAIDLMDEAASRVRMAVDSKPEEI 412
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L+R+ +QL+IE AL++E+D ASK RL ++ KEL +L +K L ++ EKE I
Sbjct: 413 DELDRRIIQLKIEREALKREEDPASKDRLGKLEKELAELEEKSAQLTASWRAEKESIAGT 472
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL-EGNQSDENLMLTETV 532
++K++ + L L+ A+RR DLARA ++ YG + E+EA + + +GN L E V
Sbjct: 473 HKIKEQLDALRSELEVAQRRGDLARAGEIMYGLMPELEAKLRSMADGNPQRS---LREEV 529
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
IA VV RWTGIPV ++ EK +R+IG EAV AVA+SV RSRAGL
Sbjct: 530 TDQDIATVVERWTGIPVDKMLTGEKDKLIHMEENLGQRVIGQDEAVKAVAQSVRRSRAGL 589
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTEL KALAE LFDDE +VRIDMSEYME+H+V+RLIGAPP
Sbjct: 590 QDPNRPLGSFLFLGPTGVGKTELTKALAEFLFDDETNMVRIDMSEYMEKHAVARLIGAPP 649
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+E+GG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLD+GRLTD GRTVDFRN
Sbjct: 650 GYVGYEQGGALTEAVRRRPYQVVLFDEVEKAHPDVFNILLQVLDEGRLTDSHGRTVDFRN 709
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
TVII+TSNLGAE+L + ++T QV RDQV+ VR FRPE LNRLDEI++F LS
Sbjct: 710 TVIILTSNLGAEYLAAHAGEEITPQV-RDQVMTVVRNSFRPEFLNRLDEILIFHRLSRAN 768
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + ++Q+ +A RLAER + L + D AL+ + YDP+YGARP++R +++ + L+
Sbjct: 769 MTHIVKIQIAQLAKRLAERKITLNIDDKALEWLAEAGYDPMYGARPLKRIIQRNLQDPLA 828
Query: 822 RMLVREEIDENSTVYI 837
++ EI E +T+ I
Sbjct: 829 MKILSGEIVEGATINI 844
>gi|393240309|gb|EJD47836.1| hypothetical protein AURDEDRAFT_183947 [Auricularia delicata
TFB-10046 SS5]
Length = 906
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/875 (51%), Positives = 598/875 (68%), Gaps = 37/875 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSG-------------IFAQAIN 51
+FT K E++A A +LA +AQ P HLA ALL++ SG IFA AI
Sbjct: 6 EFTDKAQESLATAIQLARDHHNAQVHPAHLASALLNEGSGPAQGAQPQHQQHSIFAGAIQ 65
Query: 52 NAGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVD 111
AGG+ AA +R + + +LP+Q PAP+E + +++R AQ+ K+ D+++A D
Sbjct: 66 KAGGDTAA--VQRAIQKLIVRLPAQEPAPEETSIGPAMQRLLREAQSLPKSMNDSYIAQD 123
Query: 112 QLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL 171
L+L LL+D + D+FK ++ +KS +E++R ++V+S S ++ F AL Y +DL
Sbjct: 124 HLLLALLKDPNMADVFKSCALSETALKSAIEQMRA--NKRVDSKSAESGFDALNKYAQDL 181
Query: 172 VEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDV 229
A GKLDPVIGRD EIRRV+R+LSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+ DV
Sbjct: 182 TALAEEGKLDPVIGRDNEIRRVIRVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVKRDV 241
Query: 230 PSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGK---VILFIDEIHLVLG 286
P++L RL ++DMGAL+AGAKY+GE+EER+K++L EVE++ + VILFIDE+HL++
Sbjct: 242 PASLI-CRLFSVDMGALMAGAKYKGEYEERVKSLLDEVEKSAEQGTPVILFIDEMHLLMA 300
Query: 287 AGRTEGS-MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVP 345
EG MDAANLFKP+LARG+LRCIGATTL EYRKY+E D A ERRF QV V EPSVP
Sbjct: 301 GRGGEGGGMDAANLFKPLLARGKLRCIGATTLAEYRKYIETDQALERRFAQVIVNEPSVP 360
Query: 346 DTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQ 405
+T+SILRGL+EKYE H VRI D +LV AA L+ RY+T R LPD AIDLVDEACA+VRV
Sbjct: 361 ETLSILRGLREKYELFHAVRIMDGSLVSAATLAKRYLTARRLPDAAIDLVDEACASVRVT 420
Query: 406 LDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKK 465
++ PE ID LER++++L+IE+HALE+EKD ASK RLV RK DL ++L+PL Y+
Sbjct: 421 RETAPEAIDKLERRKLELDIEIHALEREKDSASKDRLVAARKARADLDEQLRPLKAAYEA 480
Query: 466 EKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN 525
EK+R DEI ++++ +EL +AERRYDLA +DLRY AI +++ + QLE + E
Sbjct: 481 EKKRTDEIANVRRRIDELKAKADDAERRYDLATVSDLRYYAIPDLQKKLQQLEARKEAEE 540
Query: 526 LML--TETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAE 572
T+ V P+ IAE+VSRWTGIPVTRL EKE+L +G EAV AVA
Sbjct: 541 GETGGTDVVTPEAIAEIVSRWTGIPVTRLVATEKEKLLRMEKIISECVVGQPEAVKAVAN 600
Query: 573 SVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHS 632
++ SR+GL +P SFL GP+G GKT ++K LA+ LFD + ++RID SEY E+HS
Sbjct: 601 AIRLSRSGLRNAGRPIASFLMAGPSGTGKTLMSKTLAQLLFDSPDAMIRIDGSEYSEKHS 660
Query: 633 VSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDG 692
+SRLIGAPPGYVGH++GGQLTE VRR+P+ +VL DE+EKA LQVLDDGRLTDG
Sbjct: 661 ISRLIGAPPGYVGHDQGGQLTEYVRRKPFCIVLIDEIEKASREFVTLFLQVLDDGRLTDG 720
Query: 693 QGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIV 752
QGR VDFRNTVIIMTSNLGA +L + VL ++ HF PE +NR+DEI+
Sbjct: 721 QGRVVDFRNTVIIMTSNLGAAYLNENASDGPVPPAVKQNVLGTIQAHFPPEFVNRIDEII 780
Query: 753 VFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWL 812
VF PL + K+ L++K+V RLAER V L V A + + Y P YGARP++R +
Sbjct: 781 VFRPLGRASVGKIVDLRLKEVQARLAERKVVLDVDAPAREYLAMRGYSPTYGARPLQRAI 840
Query: 813 EKKVVTELSRMLVREEIDENSTVYIDASPKGDNLV 847
+ +++ LS +++ E + + TV + + LV
Sbjct: 841 QSELLNPLSVLILGERVRDGETVRVTFDKTHNRLV 875
>gi|302546991|ref|ZP_07299333.1| ATP-dependent chaperone ClpB [Streptomyces hygroscopicus ATCC
53653]
gi|302464609|gb|EFL27702.1| ATP-dependent chaperone ClpB [Streptomyces himastatinicus ATCC
53653]
Length = 887
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/887 (51%), Positives = 615/887 (69%), Gaps = 35/887 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T K+ EA+ A A GH + HL ALL P G+ + + G + A
Sbjct: 1 MDMNRLTEKSQEALQNAQTTAMRFGHTEVDGEHLLFALLDQPEGLIPRLVTQVGADPEAM 60
Query: 61 SAERVFNQAMK-KLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ A K K+ AP ++ + L +++ A+ K D +++V+ L+L +
Sbjct: 61 RSMLEAELARKPKVTGPGAAPGQVFVTQRLSQLLDTAEQEAKRLKDEYVSVEHLVLAFTD 120
Query: 120 D---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ + G + KE G+ + ++RG + +V SA+ + ++AL+ YGRDLV +A
Sbjct: 121 EGSGTAAGRVLKEHGITKDAFLHALTQVRGSQ--RVTSANPEVAYEALEKYGRDLVLEAR 178
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD EIRRV +ILSR++KNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP L
Sbjct: 179 SGKLDPVIGRDAEIRRVTQILSRKSKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGLR 238
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + ALDMG+LVAGAKYRGEFEERLKAVL EV+ A+G+++LFIDE+H V+GAG EG+M
Sbjct: 239 DKTVFALDMGSLVAGAKYRGEFEERLKAVLAEVKAAQGRILLFIDELHTVVGAGAAEGAM 298
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L IGATTL+EYRK++EKDAA ERRFQ V V EP V DT+SILRGL
Sbjct: 299 DAGNMLKPMLARGELHMIGATTLDEYRKHIEKDAALERRFQTVMVDEPGVEDTISILRGL 358
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
+E+ E HGV+IQD ALV AA +S RYI+ R LPDKAIDLVDEACA +R ++DS P E+D
Sbjct: 359 RERLEVFHGVKIQDTALVAAATMSHRYISDRFLPDKAIDLVDEACARLRTEIDSMPAELD 418
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ +LEIE AL KE D AS+ RL E+RKEL DLR + +++ E++ I ++
Sbjct: 419 EITRRVTRLEIEEAALSKETDPASRQRLEELRKELADLRAEADAKRAQWEAERQSIRRVQ 478
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLMLTE 530
L+++ EE+ +EAER YDL RAA+LRYG +QE+E + QL Q E+ +L E
Sbjct: 479 ELRRELEEVRREAEEAERNYDLNRAAELRYGKLQELERKLAAEEEQLAAKQG-EHRLLRE 537
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRA 579
V D+I+++VS WTGIPV+RL + E+ ER+IG EAV V+++++R+R+
Sbjct: 538 VVTEDEISDIVSAWTGIPVSRLKEGEREKLLRLDEILQERVIGQDEAVKLVSDAIIRARS 597
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAK LA LFD E ++R+DMSEY E+H+VSRL+GA
Sbjct: 598 GIRDPRRPIGSFIFLGPTGVGKTELAKTLAAALFDTEENMIRLDMSEYQERHTVSRLVGA 657
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFNTLLQVLDDGR+TD QGR VDF
Sbjct: 658 PPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHTDVFNTLLQVLDDGRITDAQGRLVDF 717
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
RNTVIIMTSN+G+ HLL G+ + ++ AR V+ E+R HFRPE LNR+D+IV+F PL
Sbjct: 718 RNTVIIMTSNIGSVHLLDGVTSEGELKPDARSLVMSELRGHFRPEFLNRVDDIVLFKPLG 777
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
Q+ ++ LQ ++ RLAER +A+ +T A ++ E YDP+YGARP+RR++ +V T
Sbjct: 778 EPQIERIVELQFDELRKRLAERLIAVELTPEARQVIAHEGYDPVYGARPLRRFISHEVET 837
Query: 819 ELSRMLVREEIDENSTVYIDA----------SPKGDNLVYRVQKNGG 855
+ R L++ ++ E +T+ +D P G+++ R ++ G
Sbjct: 838 LIGRALLKGDVQEGTTIKVDGRHGELVVTYEQPSGEHVEERARQEAG 884
>gi|224077716|ref|XP_002305376.1| predicted protein [Populus trichocarpa]
gi|222848340|gb|EEE85887.1| predicted protein [Populus trichocarpa]
Length = 967
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/859 (50%), Positives = 602/859 (70%), Gaps = 31/859 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT + I + ++A H HL ALL +G+ + + G +N R
Sbjct: 78 EFTDMAWQGIVSSLDVAKENKHQIVETEHLMKALLEQKNGLARRIFSKVGVDNT-----R 132
Query: 65 VFNQAMKKLPSQTPAPDEIPASTT---LIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ K + Q E +S L +I+RA+ +K +GD+ ++V+ L+LG +D
Sbjct: 133 LLEATDKSIQRQPKVHSESTSSMLGRDLETLIQRAREYKKEYGDSFVSVEHLVLGFAQDQ 192
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGKL 178
+ G LFK+ +++ +KS +E +RG++ + G ++AL+ YG+DL + +AGKL
Sbjct: 193 RFGKQLFKDFQISLQTLKSAIESIRGRQSVIDQDPEG--KYEALEKYGKDLTAMAKAGKL 250
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP L + +L
Sbjct: 251 DPVIGRDEEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVEGDVPQALMNRKL 310
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMG+L+AGAKYRGEFE+RLKAVLKEV +++G++ILFIDEIH V+GAG T G+MDA N
Sbjct: 311 ISLDMGSLIAGAKYRGEFEDRLKAVLKEVTDSDGQIILFIDEIHTVVGAGATNGAMDAGN 370
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML RG+LRCIGATTL+E+RKY+EKD A ERRFQQV+V +P+V DT+SILRGL+E+Y
Sbjct: 371 LLKPMLGRGELRCIGATTLDEHRKYIEKDPALERRFQQVFVDQPTVEDTISILRGLRERY 430
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDEA A +++++ S+P +D + R
Sbjct: 431 ELHHGVRISDSALVEAAVLSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEINR 490
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
++LE+E +L + DKASK RL + EL L+ K L +++ EK + I+ +K+
Sbjct: 491 SVLKLEMERLSLMNDTDKASKDRLSRLDTELSLLKKKQAELTEQWEHEKSVMTCIQSIKE 550
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+Y ++ +++E+A +L+ ML E V
Sbjct: 551 EIDRVNLEIQQAEREYDLNRAAELKYRSLSSLQRQLESAEKELDEYIKSGKSMLREEVTG 610
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGR 583
D IAE+VS+WTGIP+++L Q+E+E+L+ L + AV AVAE++ RSRAGL
Sbjct: 611 DDIAEIVSKWTGIPISKLKQSEREKLLHLEDELHKRVVGQDPAVKAVAEAIQRSRAGLSD 670
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+F+GPTGVGKTELAKALA +F+ E LVRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 671 PHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHSVSRLVGAPPGY 730
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTE VRRRPY+V+LFDE+EKAH VFN LQVLDDGR+TD QGRTV F NTV
Sbjct: 731 VGYEEGGQLTETVRRRPYAVILFDEIEKAHSDVFNIFLQVLDDGRVTDSQGRTVSFTNTV 790
Query: 704 IIMTSNLGAEHLL---SGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
IIMTSN+G++++L + +V + + +V+ R FRPE +NR+DE +VF PL +
Sbjct: 791 IIMTSNVGSQYILDTDDNLPKEVANETIKRRVMDAARSVFRPEFMNRVDEYIVFQPLDRD 850
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q+ + RLQ+ V RLA+R + L VTDAA++ + YDP YGARP++R +++ V EL
Sbjct: 851 QINSIVRLQLGRVQQRLADRKIKLLVTDAAVEFLGTLGYDPNYGARPVKRVIQQHVENEL 910
Query: 821 SRMLVREEIDENSTVYIDA 839
++ ++R E+ + +V ID
Sbjct: 911 AKGILRGELKDEDSVAIDT 929
>gi|325261892|ref|ZP_08128630.1| ATP-dependent chaperone protein ClpB [Clostridium sp. D5]
gi|324033346|gb|EGB94623.1| ATP-dependent chaperone protein ClpB [Clostridium sp. D5]
Length = 865
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/857 (51%), Positives = 602/857 (70%), Gaps = 27/857 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
MN +KFT + +A+ ++A G+ + HL AL++ + + + N G
Sbjct: 1 MNINKFTQNSLQAVQNCEKVAYDYGNQEIAQEHLLYALVTQNDSLILKLLEKMNIQGTLF 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
E +A+ K P ++ L V+ A+ K GD +++V+ L L LL
Sbjct: 61 TNRVE----EALAKRPKVQGG--QVFVGQDLNNVLIHAEDEAKQMGDEYVSVEHLFLALL 114
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ ++ L+KE G++ + +RG + KV S + + T+ L YG+DLVE+A
Sbjct: 115 KYASRELKALYKEFGISRNDFLQALSTVRGNQ--KVTSDNPEATYDTLNKYGQDLVERAR 172
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
KLDPVIGRDEEIR V+RILSR+TKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVP L
Sbjct: 173 DQKLDPVIGRDEEIRNVIRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEGLK 232
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMGALVAGAKYRGEFEERLKAVL+EV+ ++G++ILFIDE+H ++GAG+T+G+M
Sbjct: 233 NKTIFSLDMGALVAGAKYRGEFEERLKAVLEEVKNSDGQIILFIDELHTIVGAGKTDGAM 292
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EP+V D +SILRGL
Sbjct: 293 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVEEPTVEDAISILRGL 352
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 353 KERYEVFHGVKITDSALVAAAMLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELD 412
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L R+ MQLEIE AL+KE+D+ SK RL +++EL L ++ ++ EK ++ ++
Sbjct: 413 ELRRRIMQLEIEEEALKKEEDRLSKERLGHLQEELAGLNEEYAGKKAQWDNEKASVERVQ 472
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVG 533
+++++ E++ +Q+A+R YDL AA+L+YG + +++ + + E ++ L L E V
Sbjct: 473 KIREEIEQVNKDIQKAQREYDLNLAAELQYGRLPQLQKQLEEEEDKVREKELALVHEAVT 532
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
++IA+++SRWTGIPV +L ++E+ R+IG E V V E+++RS+AG+
Sbjct: 533 DEEIAKIISRWTGIPVAKLNESERSKTLHLGDELHRRVIGQDEGVELVTEAIIRSKAGIK 592
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAKALAE LFDDEN +VRIDMSEYME+ SVSRLIGAPPG
Sbjct: 593 DPSKPIGSFLFLGPTGVGKTELAKALAESLFDDENSMVRIDMSEYMEKFSVSRLIGAPPG 652
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT
Sbjct: 653 YVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNT 712
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVA-RDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
++IMTSNLGA +LL G+ T+ A +D V+ E+R FRPE LNRLDEI++F PL+
Sbjct: 713 ILIMTSNLGANYLLEGIEEDGTIDAASQDMVMNELRARFRPEFLNRLDEIIMFKPLTKHN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L DV RLA++ +++ +T+ A + ++ YDP+YGARP++R+L+K V T +
Sbjct: 773 IYAIIDLLAADVNKRLADKELSIELTEEARNYIVEGGYDPMYGARPLKRYLQKNVETLAA 832
Query: 822 RMLVREEIDENSTVYID 838
++++ + + ID
Sbjct: 833 KLILAGNVGRGDIILID 849
>gi|124023532|ref|YP_001017839.1| ATP-dependent Clp protease Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9303]
gi|123963818|gb|ABM78574.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9303]
Length = 863
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/863 (51%), Positives = 612/863 (70%), Gaps = 34/863 (3%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENA 58
M P D+FT K AI +A +LA H Q HL ++LL + + + + + AG +
Sbjct: 1 MQPTADQFTEKGWAAIVLAQQLAQQRKHQQLETEHLLLSLL-EQNALAGRILEKAG--VS 57
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ + + + P+ APD + + ++ +A ++A GD ++++ L+L L
Sbjct: 58 IGNLQTAVEAHLHEQPTLQAAPDSVYLGKGVNDLLDQADKHKQAFGDGFISIEHLLLALA 117
Query: 119 EDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D++ G L +AGV ++K ++ +RG + KV + + T+++L+ YGRDL A
Sbjct: 118 GDNRCGRKLLNQAGVDAGKLKVAIDAVRGNQ--KVTDQNPEGTYESLEKYGRDLTAAARE 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP+ L +
Sbjct: 176 GKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPAALQN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LIALDMGAL+AGAKYRGEFEERLKAVLKEV +EG+++LFIDEIH V+GAG T G+MD
Sbjct: 236 RQLIALDMGALIAGAKYRGEFEERLKAVLKEVTASEGQIVLFIDEIHTVVGAGATGGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KPMLARG+LRCIGATTL+E+R+++EKD A ERRFQQV V +P+V DT+SILRGLK
Sbjct: 296 ASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVQDTISILRGLK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV AA LS+RYI R LPDKAIDL+DE+ A +++++ S+PEEID
Sbjct: 356 ERYEVHHGVRIADNALVAAAVLSSRYIADRFLPDKAIDLMDESAARLKMEITSKPEEIDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +L +E D SK RL ++ +EL +L ++ L ++++EK ID++
Sbjct: 416 IDRKIVQLEMEKLSLGRESDSVSKERLEKLERELAELAEQQSALNAQWQQEKGAIDDLSS 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGA-------IQEVEAAIGQLEGNQSDENLML 528
LK++ E + +++A+R YDL +AA+L YG + E E A+ Q +G D++L L
Sbjct: 476 LKEEIERVQLQVEQAKRSYDLNKAAELEYGTLAGLQKQLSEKETALAQ-DGEAGDKSL-L 533
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGL-----------AEAVNAVAESVLRS 577
E V D IA+V+++WTGIPV +L Q+E E+L+GL +AV AVA+++ RS
Sbjct: 534 REEVTEDDIADVIAKWTGIPVAKLVQSEMEKLLGLEAELHQRVIGQEQAVQAVADAIQRS 593
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGL P +P SFLFLGPTGVGKTEL+KALA QLFD E LVRIDMSEYME+HSVSRLI
Sbjct: 594 RAGLSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSEAALVRIDMSEYMEKHSVSRLI 653
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+E GGQLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTV
Sbjct: 654 GAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTV 713
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVA--RDQVLQEVRKHFRPELLNRLDEIVVFD 755
DF NTV+I+TSN+G++ +L +G Q +V + HFRPE LNRLDE ++F
Sbjct: 714 DFTNTVLILTSNIGSQSILD--LGGDDSQYGEMERRVHDALHAHFRPEFLNRLDETIIFH 771
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
L E+LR++ LQ+ + RL +R + L ++D A D + YDP+YGARP++R ++++
Sbjct: 772 SLRREELRQIVALQVNRLRERLGDRKLGLEISDTAADWLANAGYDPVYGARPLKRAIQRE 831
Query: 816 VVTELSRMLVREEIDENSTVYID 838
+ T +++ ++ ++ V++D
Sbjct: 832 LETPIAKSILAGFYGDSQIVHVD 854
>gi|433456518|ref|ZP_20414558.1| chaperone ClpB [Arthrobacter crystallopoietes BAB-32]
gi|432196146|gb|ELK52627.1| chaperone ClpB [Arthrobacter crystallopoietes BAB-32]
Length = 868
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/860 (52%), Positives = 606/860 (70%), Gaps = 28/860 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT K+ EA++ A A++AG+ Q P+HL AL+ G+ + G + S +
Sbjct: 4 KFTTKSQEALSSAAMNASTAGNPQIEPVHLLKALMDQREGVAVALLKATGTDPDTVSVQ- 62
Query: 65 VFNQAMKKLP-SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-Q 122
+ A+K LP S + + S +++VI AQ + GD++++ + L+LGL D+
Sbjct: 63 -ASTAIKALPASSGTSVAQAQYSRGILQVINVAQQEAEKLGDSYVSTEHLLLGLAADNGA 121
Query: 123 IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGKLDP 180
G + +EAG + + + + +RG RKV +A + TFQAL+ +G DL + ++GKLDP
Sbjct: 122 AGKVLREAGASHEALSAALPGVRGD--RKVTNADPENTFQALEKFGVDLTAIARSGKLDP 179
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP +L LI+
Sbjct: 180 VIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPESLRGKTLIS 239
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LD+G++VAGAKYRGEFEERLKAVL+E++ ++G+++ FIDEIH V+GAG EGSMDA N+
Sbjct: 240 LDLGSMVAGAKYRGEFEERLKAVLEEIKNSDGQIVTFIDEIHTVVGAGAAEGSMDAGNML 299
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARG+LR IGATTL+EYR+ VEKDAA ERRFQQVYV EPSV DT+ ILRGLKE+YE
Sbjct: 300 KPMLARGELRLIGATTLDEYRENVEKDAALERRFQQVYVGEPSVEDTIGILRGLKERYEA 359
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HH V I D ALV AA LS RYITGR LPDKAIDLVDEA + +R+++DS PEEID L R
Sbjct: 360 HHKVAIADSALVAAATLSNRYITGRQLPDKAIDLVDEAASRLRMEIDSAPEEIDQLRRAV 419
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
+L +E AL E D+AS+ RL +R ++ D +++L L R++ EK ++ + LK K
Sbjct: 420 DRLTMEELALADETDEASRERLEALRADMADKKEQLAALNARWEAEKAGLNRVGDLKAKL 479
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE---NLMLTETVGPDQI 537
+EL +A+R DLA A+ + YG I ++ + + ++ LM++E V D I
Sbjct: 480 DELRSLADKAQRDGDLAEASRILYGEIPALQKELDAAQAAETQAEAPELMVSEEVTADDI 539
Query: 538 AEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV+S WTGIP R+ Q E + RLIG A+AV +V+++V R+RAG+ P +
Sbjct: 540 AEVISAWTGIPAGRMLQGESQKLLHMEQVIGGRLIGQAKAVQSVSDAVRRARAGISDPDR 599
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEY E+HSVSRL+GAPPGYVG+
Sbjct: 600 PTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYSEKHSVSRLVGAPPGYVGY 659
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTEAVRRRPYSVVL DEVEKAH VF+ LLQVLDDGRLTDGQGRTVDFRN ++++
Sbjct: 660 EEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVILVL 719
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ + + R+ V+ V F+PE LNRLD++++FDPLS E L ++
Sbjct: 720 TSNLGSQFLVDPALDE---DRKREAVMNVVHASFKPEFLNRLDDVIMFDPLSIEDLSRIV 776
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
LQ++ +A RL+ER + L VT+AA + + +DP YGARP+RR +++++ L+R L+
Sbjct: 777 DLQVQALAARLSERRLTLEVTEAAREWLALTGFDPAYGARPLRRLVQREIGDRLARGLLA 836
Query: 827 EEIDENSTVYID---ASPKG 843
I + TV +D A P+G
Sbjct: 837 GSIVDGDTVLVDREEAGPEG 856
>gi|423074005|ref|ZP_17062740.1| ATP-dependent chaperone protein ClpB [Desulfitobacterium hafniense
DP7]
gi|361855154|gb|EHL07151.1| ATP-dependent chaperone protein ClpB [Desulfitobacterium hafniense
DP7]
Length = 864
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/864 (51%), Positives = 609/864 (70%), Gaps = 25/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+ ++FT K+ EAI A +A G++Q P HL +ALL G+ Q + A
Sbjct: 3 FDTNRFTQKSQEAIIQAQTMAERNGNSQVEPEHLLLALLEQGEGVVPQVLTKLDIPVGAL 62
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ Q + +LP A ++ S L V+ A + D +++ + L+L L
Sbjct: 63 VQK--VRQEINRLPRMMGANVQLTISPRLRTVLVSAHDEMETFKDDYVSTEHLLLATL-- 118
Query: 121 SQIG----DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
SQ G + K+ G+ ++ + ++RG + +V S + + TF+AL+ YGR+LVEQA
Sbjct: 119 SQGGGAAEKILKQEGLNREKLLQALREVRGTQ--RVTSQTPEGTFRALEQYGRNLVEQAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRRV++ILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP ++
Sbjct: 177 RGKLDPVIGRDEEIRRVIQILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPESVK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D ++IALDMG+L+AGAKYRGEFEERLKAVLKEV+E E +ILFIDE+H V+GAG EG+M
Sbjct: 237 DKKIIALDMGSLIAGAKYRGEFEERLKAVLKEVQERE-DIILFIDELHTVVGAGAAEGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L +GATTL+EYRKY+EKDAA ERRFQ V V PSV DT+SILRGL
Sbjct: 296 DAGNMLKPMLARGELHMVGATTLDEYRKYIEKDAALERRFQPVTVGAPSVEDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGVRI D A++ AA LS RYI+ R LPDKAIDL+DEA A +R+++ S P E+D
Sbjct: 356 KERYETHHGVRITDGAIIAAAVLSDRYISDRFLPDKAIDLIDEAAARMRMEITSDPYELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
++R+ +QLEIE AL+KEKD+ SK RL ++ ++L +L+++ L + + E+E + I
Sbjct: 416 QIKRRILQLEIEREALKKEKDEGSKERLEKIEEDLANLKEERSALEAQLQGEREVLARIN 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVG 533
LK+ ++ +++A++ +D +AA+L+YG + ++E + LE ++ +N +L + VG
Sbjct: 476 SLKEDIDQNRLKMEQAQQAFDYNKAAELQYGILPKLEKELNALEEQLRNRKNTLLKQEVG 535
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
+ IAEVV++WT +PV +L ++E E+L IG EAV AVA++V RSRAGL
Sbjct: 536 EEDIAEVVAKWTQVPVAKLLESEMEKLVHMEARIHQRVIGQEEAVKAVADAVRRSRAGLQ 595
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAKALAE LFDD+ +VRIDMSEYME+H+VSRLIGAPPG
Sbjct: 596 DPNRPLGSFLFLGPTGVGKTELAKALAEFLFDDDQGIVRIDMSEYMEKHTVSRLIGAPPG 655
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQ+LDDGRLTDGQGR V+F+NT
Sbjct: 656 YVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHGDVFNVLLQLLDDGRLTDGQGRVVNFKNT 715
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
V+I+TSN+ + + +V R +V +E+R HFRPE LNRLDEI+VF PL E +
Sbjct: 716 VVILTSNIASPLIQELTASGAAQEVLRSRVTEELRLHFRPEFLNRLDEIIVFHPLGQEHI 775
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ ++Q+ + LA R + L ++ AAL+ ++ + YDPIYGARP++R +++ + L+
Sbjct: 776 GSIVQIQINKLRDYLAPRKMTLELSQAALNKIIQQGYDPIYGARPLKRVIQQNLQNPLAM 835
Query: 823 MLVREEIDENSTVYIDASPKGDNL 846
+++ + E V +D P+G L
Sbjct: 836 KILQGALYEGDHVLVDLDPQGQLL 859
>gi|373856910|ref|ZP_09599653.1| ATP-dependent chaperone ClpB [Bacillus sp. 1NLA3E]
gi|372453156|gb|EHP26624.1| ATP-dependent chaperone ClpB [Bacillus sp. 1NLA3E]
Length = 864
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/846 (51%), Positives = 598/846 (70%), Gaps = 26/846 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T + EAI LA H + LHL +A+ + + + + + +
Sbjct: 1 MDINKMTERLQEAILSGQSLARQNEHQEVDDLHLFLAITEQENNLVSSVLEKI--QCPVE 58
Query: 61 SAERVFNQAMKKLPSQTP---APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
+ + +A++K P T A + + L K++ A+ K D L+++ ++LG
Sbjct: 59 AFKSQLAKALEKKPKVTGTGVAQGNLYITANLQKILTEAEKEMKQFQDDFLSIEHVLLGA 118
Query: 118 LE-DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ ++G + GV ++ ++++RG + +V S + ++T++ALK YGRDLVE+
Sbjct: 119 MTVRGEVGKILAGLGVTKEKLLVAIKEIRGNQ--RVTSQNPESTYEALKKYGRDLVEEVK 176
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GK+DPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 177 TGKMDPVIGRDNEIRHVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + ALDM AL+AGAK+RGEFEERLKAVL EVE++EG+++LFIDE+H ++GAG+TEG+M
Sbjct: 237 DKTIFALDMSALIAGAKFRGEFEERLKAVLNEVEKSEGRILLFIDELHTIVGAGKTEGAM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+E+RKY+EKD A ERRFQQV V EP V +T+SILRGL
Sbjct: 297 DAGNMLKPMLARGELHCIGATTLDEHRKYIEKDPALERRFQQVIVQEPDVENTISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I DRA+V AA LS RYIT R LPDKAIDL+DEACA +R ++DS P E+D
Sbjct: 357 KERFEIHHGVNIHDRAIVAAATLSDRYITDRFLPDKAIDLIDEACAMIRTEIDSMPTELD 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ MQLEIE AL+KE D S+ RL ++KEL DL+D+ + +++ EK+ I ++R
Sbjct: 417 EVVRRVMQLEIEEAALQKENDPQSQNRLEILKKELADLKDRANSMKAQWQIEKDGIQKVR 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE--NLMLTETV 532
+ E+L L+EAE YDL +A++LRYG I + E + QLE +D + +L E V
Sbjct: 477 DQRALLEKLRRELEEAENDYDLNKASELRYGKIPQTEKELKQLELQLNDHKGSKLLREEV 536
Query: 533 GPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGL 581
++IA +V+RWTGIPVTRL G+ EK ER+IG EA+ VA +VLR+RAG+
Sbjct: 537 TEEEIASIVARWTGIPVTRLVEGEREKLLRLESILHERVIGQDEAIELVANAVLRARAGI 596
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME+H+VSRLIGAPP
Sbjct: 597 KDPNRPIGSFIFLGPTGVGKTELAKTLANALFDSEEQMIRIDMSEYMEKHAVSRLIGAPP 656
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD GRTVDF+N
Sbjct: 657 GYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSHGRTVDFKN 716
Query: 702 TVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
TVIIMTSNLG+ L+ M G ++ + R +V+ +R HFRPE LNR+DE ++F PL
Sbjct: 717 TVIIMTSNLGSHLLIDEAMKDGNISEE-TRGKVMATLRNHFRPEFLNRVDETLLFKPLGL 775
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
+++ + + D+ RL+++ + L +TD A + +DP+YGARP++R+++++V T+
Sbjct: 776 GEIKGIVSKLVIDLQKRLSDQQINLRLTDEAKTFIAENGFDPVYGARPLKRFIQREVETK 835
Query: 820 LSRMLV 825
L+++++
Sbjct: 836 LAKLII 841
>gi|297627074|ref|YP_003688837.1| ATP-dependent Clp protease B1 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296922839|emb|CBL57417.1| Chaperone clpB 1 (ATP-dependent Clp protease B1) (Clp chaperone)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 858
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/854 (52%), Positives = 594/854 (69%), Gaps = 24/854 (2%)
Query: 10 TNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAERVFNQA 69
+ +A+ A LA + G+ P+HL A+L P A + G + A + + A
Sbjct: 2 SRDAVTAAVRLALTKGNPTAEPVHLLHAMLMVPESSVAPLLKAVGAD--AARVDGAASAA 59
Query: 70 MKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE-DSQIGDLF 127
+ KLPS + + P S L +V+ A+ GD ++ + L++ L E DS ++
Sbjct: 60 IDKLPSSSGSSVAQPQLSGALARVLADAETRADKLGDQFVSTEHLLIALAEVDSDAKNIL 119
Query: 128 KEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRD 185
GV A ++ RG +++ SA + AL Y DL ++A GKLDPVIGRD
Sbjct: 120 ASNGVTTAALEKAFNDSRGD--KRITSAESEGGESALDKYSIDLTQRAKDGKLDPVIGRD 177
Query: 186 EEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGA 245
EIRRV ++LSRRTKNNPVLIGE GVGKTAVVEGLAQRIV+GDVP +L RL++LD+ +
Sbjct: 178 SEIRRVAQVLSRRTKNNPVLIGEAGVGKTAVVEGLAQRIVKGDVPDSLKGRRLVSLDLAS 237
Query: 246 LVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLA 305
+VAGAKYRGEFEERLKAVL E++ AEG++I FIDE+H V+GAG +EGSMDA+N+ KP+LA
Sbjct: 238 MVAGAKYRGEFEERLKAVLNEIKSAEGQIITFIDELHTVVGAGASEGSMDASNMLKPLLA 297
Query: 306 RGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVR 365
RG+LR IGATTL+EYR+++EKD A ERRFQQVYV EPSV DTV+ILRGL+E+YE HH VR
Sbjct: 298 RGELRLIGATTLDEYREHIEKDPALERRFQQVYVGEPSVEDTVAILRGLRERYEAHHKVR 357
Query: 366 IQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEI 425
I D ALV AAQLS RYITGR LPDKAIDLVDEA + +R+++DS PEEID L R+ +L +
Sbjct: 358 ITDSALVAAAQLSHRYITGRQLPDKAIDLVDEAASRLRMEIDSSPEEIDTLRRQVDRLTM 417
Query: 426 ELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREELLF 485
E A+EKE+D SKARL + +L D +++L+ L R+ EKE ++++ LK + + L
Sbjct: 418 EQFAVEKEEDPGSKARLARINSDLADAKEQLRGLEARWAAEKEGLNKVGELKTRIDALRT 477
Query: 486 ALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN--LMLTETVGPDQIAEVVSR 543
+ R DLA+A+++ YG I E+ + + + D M++E V D IAEVVS
Sbjct: 478 EADKHTRDGDLAKASEILYGEIPELNKQLDEASAAEEDSQGKSMVSEEVTSDDIAEVVSA 537
Query: 544 WTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGRPQQPTGSFL 592
WTG+PV ++ G++EK +RL+G AV AV+++V RSRAG+ P +PTGSF+
Sbjct: 538 WTGVPVGKMLEGESEKLLDMENRIGKRLVGQQAAVKAVSDAVRRSRAGISDPNRPTGSFM 597
Query: 593 FLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQL 652
FLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+HSVSRL+GAPPGYVG+EEGGQL
Sbjct: 598 FLGPTGVGKTELAKALADFLFDDETAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQL 657
Query: 653 TEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGA 712
TEAVRRRPYSVVL DE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRN ++IMTSNLG+
Sbjct: 658 TEAVRRRPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNVILIMTSNLGS 717
Query: 713 EHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKD 772
+ + M + + R+QV+ V+ HFRPE LNRLDEIV+FD LS E L K+ + +
Sbjct: 718 QFMADPSM---SPEERRNQVMAVVKDHFRPEFLNRLDEIVLFDELSREDLDKIVDISLDK 774
Query: 773 VAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDEN 832
+ RLAER +++ V+ AA + + YDP+YGARP+RR ++ V +L+R ++ I ++
Sbjct: 775 LNRRLAERRISIDVSAAAREWLARTGYDPVYGARPLRRLIQTTVEDQLARAMLAGTISDD 834
Query: 833 STVYIDASPKGDNL 846
V +D + GD +
Sbjct: 835 QKVSVDMNQAGDGV 848
>gi|349688168|ref|ZP_08899310.1| Clp protease ATP-binding subunit [Gluconacetobacter oboediens
174Bp2]
Length = 867
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/878 (52%), Positives = 620/878 (70%), Gaps = 31/878 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT ++ + A +A + Q TP HL ALL D G A I AGG+ A
Sbjct: 1 MNIEKFTERSRGFLQAAQTIAMRDYNQQLTPEHLLKALLDDDQGAAAALIRAAGGQXPAI 60
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRA-QAAQKAHGDTHLAVDQLILGLL 118
+A A+ KLP Q + A++ L++V+ A QAAQKA GD ++A D+L+ +
Sbjct: 61 TAAN--EAALAKLPKVQGSGAGQPSATSELVRVLDAAEQAAQKA-GDEYVAQDRLLAAIA 117
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
++ G + G + + +R +GR V+S + + F ALK Y RD+ E A
Sbjct: 118 ASETPAGQALRAGGATPQALDKAIATIR--KGRTVDSENAEANFDALKKYARDVTEIALQ 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++L+RR+KNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 176 GKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEALKN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LDMGALVAGAK+RGEFEERLKAVLKE+E AEG++ILFIDE+H ++GAGR++G+MD
Sbjct: 236 KKLLSLDMGALVAGAKFRGEFEERLKAVLKEIESAEGQIILFIDEMHTLVGAGRSDGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG L CIGATTL+EYRKY+EKDAA RRFQ VYV EP+V DT+SILRG+K
Sbjct: 296 ASNLIKPELARGVLHCIGATTLDEYRKYIEKDAALARRFQPVYVGEPTVADTISILRGIK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHG+RI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D
Sbjct: 356 EKYELHHGIRISDNALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQIDSKPEELDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE A+ KE D ASK RLV++ EL +L++K L + EK+R++ +++
Sbjct: 416 LDRRLIQLKIEREAIRKEDDPASKERLVKLEAELSELQEKSDALTAAWHAEKDRVNAVQK 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI--GQLEGNQ-SDENLMLTETV 532
L+++ +++ ++ A+R+ DLARA++L Y + +++A I Q E +Q S + M+++TV
Sbjct: 476 LQEEMDQVRSDIEIAQRKGDLARASELMYSRLPQLQAQIAKAQEEADQISKGDGMVSDTV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
IA VVSRWTG+PV R+ + E+ +L +G A+ AV+ +V R+RAGL
Sbjct: 536 TDQGIAAVVSRWTGVPVDRMLEGERAKLLRMEDELRKSVVGQEPALKAVSNAVRRARAGL 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTEL KALA LFDDE L+R+DMSE+ME+H+V+RL+GAPP
Sbjct: 596 QDPNRPIGSFLFLGPTGVGKTELCKALARFLFDDEKALLRVDMSEFMEKHAVARLVGAPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRN
Sbjct: 656 GYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGRTVDFRN 715
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+I++TSNLG+E +L+ + +++ R +V+Q VR HFRPE LNRLDEI++F L
Sbjct: 716 TLIVLTSNLGSE-VLAHLPDGESVESVRPEVMQVVRNHFRPEFLNRLDEIILFSRLQKAD 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ +Q+ + LAER + L + + + E YDP+YGARP++R +++ + L+
Sbjct: 775 MGKIVEIQIGRLRKLLAERNIQLRLDKGGEEWLANEGYDPVYGARPLKRVIQRALQNPLA 834
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDA 859
+L+ I + TV +DA K D+L NG +DA
Sbjct: 835 GLLLEGTIHDGETVTVDA--KDDHLTI----NGNEMDA 866
>gi|335357393|ref|ZP_08549263.1| chaperone [Lactobacillus animalis KCTC 3501]
Length = 865
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/867 (51%), Positives = 606/867 (69%), Gaps = 30/867 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA-- 59
N D T A+ A ++A + + HL L P + + AG + A
Sbjct: 3 NEDNLTSAVQAALGEAQQIAITRKQQEIDVAHL-FKFLVQPGELVGEIYKKAGVDLKALE 61
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q +RV +Q LP + + A ST L++++R A ++ D ++++D L+L L+
Sbjct: 62 QEIDRVLDQ----LPVISGSVQYGQAFSTKLLQLLRDADEIKQEFSDEYISLDTLVLALM 117
Query: 119 EDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ + + E G +++ + ++R G V S + + +QAL+ YG DLV+Q
Sbjct: 118 KQTYDPLARWLTEHGATATKLQQTITEMRA--GELVTSKNQEEQYQALEKYGVDLVKQVR 175
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GK DP+IGRDEEIR V+RILSR+TKNNPVLIGEPGVGKTA++EGLAQRIVR DVP NL
Sbjct: 176 QGKQDPIIGRDEEIRDVIRILSRKTKNNPVLIGEPGVGKTAIIEGLAQRIVRKDVPDNLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + +LDMG+L+AGAKYRGEFEERLKAVLK V +++G++ILFIDEIH ++GAG+TEGSM
Sbjct: 236 DKTIFSLDMGSLIAGAKYRGEFEERLKAVLKAVTKSQGQIILFIDEIHNIVGAGKTEGSM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L IGATTL+EYR+Y+EKD A ERRFQ+V V EP+V DT+SILRGL
Sbjct: 296 DAGNLLKPMLARGELHLIGATTLDEYREYLEKDKALERRFQKVLVKEPTVEDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV+++S P E+D
Sbjct: 356 KERYEIHHGVSIHDSALVAAATLSDRYITDRFLPDKAIDLVDEACAEIRVEMNSMPTELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ M+ E+E AL+KE D ASK RL E++ EL + R+K L MR++ EKE + +I
Sbjct: 416 QITRQLMRQEVEEAALKKESDPASKKRLAEMQSELAESREKANQLKMRWESEKENVQKIS 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
K + + L+EAE YDL +AA L++ I E+E + +LE + +N ++ E+V
Sbjct: 476 DKKSELDRAKHELEEAENNYDLEKAAKLQHAVIPELEKQLAKLEQVERPDNWLVEESVTE 535
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGR 583
++IA VVSR TG+PV +L Q E+++L+ LA EAV+AV+ +VLRSRAGL
Sbjct: 536 EEIASVVSRLTGVPVAKLVQGERQKLLHLAENLHKRVIGQDEAVDAVSNAVLRSRAGLQD 595
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSF+FLGPTGVGKTELAKALAE LFD + +VRIDMSEYME+ +VSRL+GA PGY
Sbjct: 596 PSKPLGSFMFLGPTGVGKTELAKALAEDLFDSDKHMVRIDMSEYMEKANVSRLVGAAPGY 655
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRR PY++VLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+
Sbjct: 656 IGYEEGGQLTEAVRRNPYTIVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTI 715
Query: 704 IIMTSNLGAEHLLSGMMG--KVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+I+TSNLG+E LL+ + K++ + A+ QVL + HF+PE LNR+D+I++F PLS +
Sbjct: 716 LILTSNLGSEILLNNLEADDKISPE-AKKQVLDIAKAHFKPEFLNRIDDIIMFSPLSLKA 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ + ++ RL E+ ++L ++D+A + + YDP YGARP++R++ +V T L+
Sbjct: 775 IGKIVDKFVAQLSKRLEEQEISLTISDSARQWLAQKGYDPAYGARPLQRFITNQVETPLA 834
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVY 848
R ++ EI +S V ID K NLV+
Sbjct: 835 REIISGEILPHSKVEIDL--KDGNLVF 859
>gi|404369969|ref|ZP_10975296.1| chaperone ClpB [Clostridium sp. 7_2_43FAA]
gi|226913900|gb|EEH99101.1| chaperone ClpB [Clostridium sp. 7_2_43FAA]
Length = 864
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/861 (49%), Positives = 598/861 (69%), Gaps = 25/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK T + EA+ A +A H Q +HL AL+ G+ + G +
Sbjct: 1 MNIDKMTLRVQEALNNASLVAVKYNHQQVELIHLFSALVEQEDGLIPNILTKMGIR--VK 58
Query: 61 SAERVFNQAMKKLPS---QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S + N+ + P + + A+ + +V+ +A+ K D++++V+ L+L +
Sbjct: 59 SLDEDVNKVLDNKPKVLGEGANSSGVYATRQIEEVLVKAEDIAKKFEDSYISVEHLMLAI 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
+E + ++ L + + ++++RG + +VE+ + T+ AL YG +L +
Sbjct: 119 IEVDKNGEVKKLLDKYNINKKNFMEVLKEVRGNQ--RVETQDPEGTYDALGKYGTNLTDL 176
Query: 175 AGK--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A K LDPVIGRD+EIRR +RILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP
Sbjct: 177 AKKHKLDPVIGRDDEIRRTIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + +LDMG+L+AGAKYRGEFEERLKAVLKEV+ +EG++ILFIDEIH ++GAG+T+G
Sbjct: 237 LKDKVIFSLDMGSLIAGAKYRGEFEERLKAVLKEVQSSEGRIILFIDEIHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KP+LARG+L CIGATT +EYR+Y+EKD A ERRFQ V V EP+V D +SILR
Sbjct: 297 AMDAGNLIKPLLARGELHCIGATTFDEYRQYIEKDKALERRFQPVVVEEPTVEDAISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHGVRI D AL+ AA+LS RYI R+LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLKERFEIHHGVRIHDTALIAAAKLSHRYIQDRYLPDKAIDLIDEAGAMIRTEIDSLPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+DN+ RK+ QLEIE AL KE D+ SK +LV + KE+ +L+ K + +++KEK I +
Sbjct: 417 LDNIRRKQFQLEIEKEALTKESDEGSKKKLVALEKEIAELKAKNDEMTAKFEKEKGAIVK 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTE 530
+R LK K ++ L+ A+R YD +AA+++Y I +E I Q E + ++ E +L E
Sbjct: 477 LRDLKSKLDDARGDLEAAQRNYDYNKAAEIQYSVIPALEEEIKQKEVDVKENYEGALLKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V +++++++S+WTGIPVT L + E+E+L IG EA+ AV+ ++LR+RA
Sbjct: 537 EVTEEEVSKILSKWTGIPVTNLLEGEREKLLRLESEMQGRVIGQEEAITAVSNAILRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL +P GSF+FLGPTGVGKTELAK LA LFD E ++RIDMSEYME+HSVSRL+GA
Sbjct: 597 GLKDVNKPIGSFIFLGPTGVGKTELAKTLARNLFDSEENIIRIDMSEYMEKHSVSRLVGA 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG++EGGQLTEAVRR PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF
Sbjct: 657 PPGYVGYDEGGQLTEAVRRNPYSVILFDEIEKAHEDVFNIFLQILDDGRLTDNKGKTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSN+G+ +LL V R QV+ E++ F+PE LNR+D+I++F PLS
Sbjct: 717 KNTIIIMTSNIGSSYLLENKNEDVVDDNIRAQVMNEMKLRFKPEFLNRVDDIIMFKPLSE 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
++K+ + +K+V+ RL ++ + L VTD A I+ E YDP+YGARP++R+++ +
Sbjct: 777 NGIKKIIDIFLKEVSSRLKDKNITLEVTDEAKTIMAKEGYDPVYGARPLKRYIQNSLENN 836
Query: 820 LSRMLVREEIDENSTVYIDAS 840
L+R +++ EI S V +DA+
Sbjct: 837 LARKIIKGEIGYGSNVVVDAN 857
>gi|119026482|ref|YP_910327.1| chaperone clpB [Bifidobacterium adolescentis ATCC 15703]
gi|118766066|dbj|BAF40245.1| chaperone clpB [Bifidobacterium adolescentis ATCC 15703]
Length = 905
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/907 (50%), Positives = 618/907 (68%), Gaps = 46/907 (5%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT EA++ A + A + G+ Q LHL A+L + + I AGG SAE
Sbjct: 4 KFTQMAQEALSDAVQNAAALGNPQVDTLHLLDAMLRQENSMARALIEAAGGNAQNVSAE- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
+QAM+ LPS + + P S L V+ +A+ + GD ++ VD +++ + + +
Sbjct: 63 -VHQAMQSLPSASGSTTTQPDVSRQLSAVLSQAEKEMQRRGDEYVTVDLMLVAIAAAKPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q D+ ++ G+ ++++ + RG + RKV SA + +++AL+ Y DL A GKLD
Sbjct: 122 QSADILEKNGLTADKLRNALTAARGSD-RKVTSADAEGSYKALEKYSTDLTAAAKEGKLD 180
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + +LI
Sbjct: 181 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLI 240
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL+E+++A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 241 SLDLGSMVAGSKYRGEFEERLKSVLEEIKKADGQIITFIDEIHTIVGAGAAEGSMDAGNM 300
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DTV+ILRG+ KYE
Sbjct: 301 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTVAILRGIAPKYE 360
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L R+
Sbjct: 361 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELRRQ 420
Query: 420 RMQLEIELHAL-------------EKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKE 466
+L++E L E E D ++K RL ++ +E+ D +KL L R+ E
Sbjct: 421 VDRLKMEKSYLLGNPKNDKATEKAEAELDDSAKDRLADLNQEIADKSEKLNGLKARWDAE 480
Query: 467 KERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN- 525
K + I L++K +EL ++ ER DLA+++ + YG I ++ I Q E N+++
Sbjct: 481 KNGHNRIGDLRKKLDELRTQAEKYEREGDLAKSSAINYGEIPAIQKEIAQAEKNEAESGG 540
Query: 526 --------LMLTETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEA 566
M+ + V D IAE+VS WTGIPV RL G+NEK +R+IG EA
Sbjct: 541 ADNANADVPMVPDRVDADSIAEIVSDWTGIPVGRLMQGENEKLLHMEEYLGKRVIGQKEA 600
Query: 567 VNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSE 626
+ AV+++V RSRAG+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSE
Sbjct: 601 IQAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSE 660
Query: 627 YMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDD 686
YME+ SVSRLIGA PGY+G+EEGGQLTEAVRRRPYSVVLFDEVEKA+ VF+ LLQVLDD
Sbjct: 661 YMEKASVSRLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDD 720
Query: 687 GRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLN 746
GRLTDGQGRTVDF+NT++IMTSNLG++ L++ M + V+ V F+PE +N
Sbjct: 721 GRLTDGQGRTVDFKNTILIMTSNLGSQFLVNPDM---DADAKKKAVMDAVHMQFKPEFIN 777
Query: 747 RLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGAR 806
RLDE+V+F PL+ E+L + +Q+ V+ RL +R + L VTD+A + + YDP YGAR
Sbjct: 778 RLDELVMFHPLTREELGGIVDIQVAQVSARLTDRRITLDVTDSAREWLANTGYDPAYGAR 837
Query: 807 PIRRWLEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSD 866
P+RR ++ +V +L+RML+ E+ + TV +D + GD+L D G K+D
Sbjct: 838 PLRRLVQTEVGDQLARMLLAGEVHDGDTVLVDQT-GGDHLELSAWAADQLEDMGEG-KTD 895
Query: 867 VLIQIPN 873
+PN
Sbjct: 896 DSADVPN 902
>gi|299822157|ref|ZP_07054043.1| chaperone protein ClpB [Listeria grayi DSM 20601]
gi|299815686|gb|EFI82924.1| chaperone protein ClpB [Listeria grayi DSM 20601]
Length = 870
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/865 (50%), Positives = 618/865 (71%), Gaps = 28/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+NP+++T + + IA A LA H + HL LL++ FA + +
Sbjct: 4 LNPNQYTEQVQQLIADAQALAVEWQHQEIDSYHLFHELLANSE--FAARVYEVAEIDKQL 61
Query: 61 SAERVFNQAMKKLPSQTPAPDEI--PASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
E V N + LP T + + S +L +++ A +K D++L+ + L+L ++
Sbjct: 62 LMETVDN-GLAGLPVITGSNVQYGQAMSQSLYQLLTDAGKVEKELEDSYLSTEHLLLAIM 120
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
E + I + ++ + ++K + ++RG G++V S + + T++AL YGRDL+ +
Sbjct: 121 EQKNHPITEAIQKQKCSKKQLKEAIMQIRG--GKRVTSPNAEETYEALLKYGRDLIAEVR 178
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA++EGLAQRIVR DVP L
Sbjct: 179 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIIEGLAQRIVRKDVPEGLK 238
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV+++EG+V+LFIDEIH+++GAG+TEG+M
Sbjct: 239 DKTIISLDLGSLIAGAKYRGEFEERLKAVLQEVKQSEGQVLLFIDEIHMIVGAGKTEGAM 298
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP++ DTVSILRGL
Sbjct: 299 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVTVNEPTLEDTVSILRGL 358
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA+LS RYIT R LPDKAIDL+DEACA +RV++DS P E+D
Sbjct: 359 KERFEIHHGVNIHDNALVAAARLSDRYITDRFLPDKAIDLIDEACATIRVEIDSMPNELD 418
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ R+ MQLEIE AL++E D AS+ RL +++KEL D ++ + +++ EK I +IR
Sbjct: 419 EVTRRVMQLEIEEAALKEESDPASRRRLEQLQKELADYKEAANQMQSKWEIEKNEISQIR 478
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE----NLMLTE 530
+++ + L L+EAE YDL +AA+LR+G I E E + LE ++ + +L E
Sbjct: 479 EKREQIDILRHQLEEAENNYDLTKAAELRHGKIPEAEKELAALEAENREKSKTGDRLLQE 538
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRA 579
V ++IA+++ RWTGIPV++L + E+E+L IG +AV V+ +VLR+RA
Sbjct: 539 EVTENEIADIIGRWTGIPVSKLVEGEREKLLKLGDLLHQQVIGQDQAVELVSNAVLRARA 598
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E ++RIDMSEYME+HSVSRL+GA
Sbjct: 599 GIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEEHMIRIDMSEYMEKHSVSRLVGA 658
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR VDF
Sbjct: 659 PPGYVGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRMVDF 718
Query: 700 RNTVIIMTSNLGAEHLLSGMM-GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ +D + Q ++ F+PE LNR+D+I++F PL+
Sbjct: 719 KNTVIIMTSNIGSTLLLERTKDGEISPELEKD-IQQVLQGSFKPEFLNRIDDIILFKPLT 777
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
E ++ + + ++ RLAE+ + L +++ A + +E+YDP+YGARP++R++ +++ T
Sbjct: 778 IENMKGIVDKLIHELERRLAEQEIHLEMSEEAKTFIASEAYDPVYGARPLKRYIVRQIET 837
Query: 819 ELSRMLVREEIDENSTVYIDASPKG 843
L+R +V +I +STV I+ + +G
Sbjct: 838 PLARDIVAGKILPHSTVTIERTEEG 862
>gi|356523596|ref|XP_003530423.1| PREDICTED: chaperone protein ClpB3, chloroplastic-like [Glycine
max]
Length = 974
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/860 (51%), Positives = 600/860 (69%), Gaps = 32/860 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT +AI + E+A H HL ALL +G+ + + G +N R
Sbjct: 83 EFTEMAWQAIVSSPEVAKENKHQIVETEHLMKALLEQKNGLARRIFSKVGVDNT-----R 137
Query: 65 VFNQAMKKLPSQTPAPDEIPASTT---LIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ K + Q E S L +I+RA+ +K +GD+ ++V+ L+L +D
Sbjct: 138 LLEATDKYIQRQPKVLGESSGSMLGRDLEALIQRARDHKKKYGDSFVSVEHLVLAFTQDQ 197
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGKL 178
+ G F++ ++ +KS +E +RG++ + G ++AL+ YG+DL + +AGKL
Sbjct: 198 RFGKQFFRDFQISEPALKSAIESVRGRQSVIDQDPEG--KYEALEKYGKDLTAMAKAGKL 255
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP L + RL
Sbjct: 256 DPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVHGDVPQALMNRRL 315
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAKYRGEFE+RLKAVLKEV E++G+ ILFIDEIH V+GAG T G+MDA N
Sbjct: 316 ISLDMGALIAGAKYRGEFEDRLKAVLKEVTESDGQTILFIDEIHTVVGAGATNGAMDAGN 375
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +P+V DT+SILRGL+E+Y
Sbjct: 376 LLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTISILRGLRERY 435
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDEA A +++++ S+P +D + R
Sbjct: 436 ELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEINR 495
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
++LE+E +L + DKASK RL + EL L++K L +++ EK + I+ +K+
Sbjct: 496 SVLKLEMERLSLMNDTDKASKDRLNRLEAELSLLKEKQAELTEQWEHEKSVMTRIQSIKE 555
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG++ +++E+A +L+ + ML E V
Sbjct: 556 EIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLESAEKELDEYMNSGKSMLREEVTG 615
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGR 583
+ IAE+VS+WTGIPV++L Q+E+E+L+ L E V AVAE++ RSRAGL
Sbjct: 616 NDIAEIVSKWTGIPVSKLQQSEREKLLYLEEVLHKRVVGQDPVVKAVAEAIQRSRAGLSD 675
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+F+GPTGVGKTELAKALA LF+ E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 676 PHRPIASFMFMGPTGVGKTELAKALAAYLFNTEEALVRIDMSEYMEKHAVSRLIGAPPGY 735
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTE VRRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QGRTV F NTV
Sbjct: 736 VGYEEGGQLTEIVRRRPYAVILFDEIEKAHADVFNVFLQILDDGRVTDSQGRTVSFTNTV 795
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEV----RKHFRPELLNRLDEIVVFDPLSH 759
IIMTSN+G++++L+ ++A + + Q V R FRPE +NR+DE +VF PL
Sbjct: 796 IIMTSNVGSQYILNTDDDTTPKELAYETIKQRVMDAARSIFRPEFMNRVDEYIVFQPLDR 855
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
EQ+ + RLQ++ V R+A+R + + VTDAA+ ++ + YDP YGARP++R +++ V E
Sbjct: 856 EQISSIVRLQLERVQKRIADRKMKIQVTDAAVQLLGSLGYDPNYGARPVKRVIQQNVENE 915
Query: 820 LSRMLVREEIDENSTVYIDA 839
L++ ++R E E + ID
Sbjct: 916 LAKGILRGEFKEEDAILIDT 935
>gi|89894414|ref|YP_517901.1| hypothetical protein DSY1668 [Desulfitobacterium hafniense Y51]
gi|89333862|dbj|BAE83457.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 864
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/864 (51%), Positives = 609/864 (70%), Gaps = 25/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+ ++FT K+ EAI A +A G++Q P HL +ALL G+ Q + A
Sbjct: 3 FDTNRFTQKSQEAIIQAQTMAERNGNSQVEPEHLLLALLEQGEGVVPQVLTKLDIPVGAL 62
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ Q + +LP A ++ S L V+ A + D +++ + L+L L
Sbjct: 63 VQK--VRQEVNRLPRMMGANVQLTISPRLRTVLVSAHDEMETFKDDYVSTEHLLLATL-- 118
Query: 121 SQIG----DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
SQ G + K+ G+ ++ + ++RG + +V S + + TF+AL+ YGR+LVEQA
Sbjct: 119 SQGGGAAEKILKQEGLNREKLLQALREVRGTQ--RVTSQTPEGTFRALEQYGRNLVEQAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRRV++ILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP ++
Sbjct: 177 RGKLDPVIGRDEEIRRVIQILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPESVK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D ++IALDMG+L+AGAKYRGEFEERLKAVLKEV+E E +ILFIDE+H V+GAG EG+M
Sbjct: 237 DKKIIALDMGSLIAGAKYRGEFEERLKAVLKEVQERE-DIILFIDELHTVVGAGAAEGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L +GATTL+EYRKY+EKDAA ERRFQ V V PSV DT+SILRGL
Sbjct: 296 DAGNMLKPMLARGELHMVGATTLDEYRKYIEKDAALERRFQPVTVGAPSVEDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGVRI D A++ AA LS RYI+ R LPDKAIDL+DEA A +R+++ S P E+D
Sbjct: 356 KERYETHHGVRITDGAIIAAAVLSDRYISDRFLPDKAIDLIDEAAARMRMEITSDPYELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
++R+ +QLEIE AL+KEKD+ SK RL ++ ++L +L+++ L + + E+E + I
Sbjct: 416 QIKRRILQLEIEREALKKEKDEGSKERLEKIEEDLANLKEERSALEAQLQGEREVLARIN 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVG 533
LK+ ++ +++A++ +D +AA+L+YG + ++E + LE ++ +N +L + VG
Sbjct: 476 SLKEDIDQNRLKMEQAQQAFDYNKAAELQYGILPKLEKELNALEEQLRNRKNTLLKQEVG 535
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
+ IAEVV++WT +PV +L ++E E+L IG EAV AVA++V RSRAGL
Sbjct: 536 EEDIAEVVAKWTQVPVAKLLESEMEKLVHMEARIHQRVIGQEEAVKAVADAVRRSRAGLQ 595
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAKALAE LFDD+ +VRIDMSEYME+H+VSRLIGAPPG
Sbjct: 596 DPNRPLGSFLFLGPTGVGKTELAKALAEFLFDDDQGIVRIDMSEYMEKHTVSRLIGAPPG 655
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQ+LDDGRLTDGQGR V+F+NT
Sbjct: 656 YVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHGDVFNVLLQLLDDGRLTDGQGRVVNFKNT 715
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
V+I+TSN+ + + +V R +V +E+R HFRPE LNRLDEI+VF PL E +
Sbjct: 716 VVILTSNIASPLIQELTASGAAQEVLRSRVTEELRLHFRPEFLNRLDEIIVFHPLGQEHI 775
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ ++Q+ + LA R + L ++ AAL+ ++ + YDPIYGARP++R +++ + L+
Sbjct: 776 GSIVQIQINKLRDYLAPRKMTLELSQAALNKIIQQGYDPIYGARPLKRVIQQNLQNPLAM 835
Query: 823 MLVREEIDENSTVYIDASPKGDNL 846
+++ + E V +D P+G L
Sbjct: 836 KILQGALYEGDHVLVDLDPQGQLL 859
>gi|116873639|ref|YP_850420.1| chaperone ClpB [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116742517|emb|CAK21641.1| chaperone ClpB [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 811
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/804 (53%), Positives = 593/804 (73%), Gaps = 25/804 (3%)
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
S ++V + +++K+P S + S +L +++R A+ QK D ++ + LIL ++
Sbjct: 3 SLQKVVDDSLRKIPVVSGSDVNYGQAMSGSLFQLMRDAEKEQKQLEDDFISTEHLILAVM 62
Query: 119 ED--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ S I K A ++K + K+RG G+KV S + + ++AL YGRDLV +
Sbjct: 63 DQKTSPITAELKNQHKAKKQIKEAILKIRG--GKKVTSQNAEENYEALTKYGRDLVAEVR 120
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 121 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 180
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV+++EG+++LFIDEIH ++GAG+T+G+M
Sbjct: 181 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSEGQILLFIDEIHTIVGAGKTDGAM 240
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 241 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 300
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 301 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 360
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 361 EVTRKVMQLEIEEAALKEEKDPASERRLEMLQRELADYKEEANKMKSKWESEKSEISKIR 420
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQ----SDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I VE + LE + E+ +L E
Sbjct: 421 EVREQIDHLRHELEEAENNYDLNKAAELRHGKIPAVEKELLALETENREKTAQEDRILQE 480
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 481 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVQLVSDAVLRARA 540
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 541 GIKDPKRPIGSFIFLGPTGVGKTELAKALAYNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 600
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 601 PPGYVGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 660
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 661 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLT 719
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 720 LADIKGIVEKLVEELQIRLADQEITITISDDAKAFIAEEAYDPVYGARPLKRYIVRHVET 779
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID K
Sbjct: 780 PLAREIVSGKIMPHSSVEIDLQEK 803
>gi|148556033|ref|YP_001263615.1| ATPase [Sphingomonas wittichii RW1]
gi|148501223|gb|ABQ69477.1| ATPase AAA-2 domain protein [Sphingomonas wittichii RW1]
Length = 859
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/861 (53%), Positives = 599/861 (69%), Gaps = 36/861 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + + A +A H + P HL ALL D G+ + I AGG+ A
Sbjct: 1 MNLEKFTDRAKGFLQSAQTVAIRNSHQRIAPEHLLKALLEDEQGMASGLIKAAGGDPAV- 59
Query: 61 SAERVFNQAMKKLPS-------QTPAPDEIPASTTLIKVIRRA-QAAQKAHGDTHLAVDQ 112
A R + A+ K+P+ TP D L +V+ +A Q AQKA GD+++ V++
Sbjct: 60 -AMRATDAALAKIPAVSGSGAQATPGLD-----NDLARVLDQAEQIAQKA-GDSYVTVER 112
Query: 113 LILGLL--EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRD 170
++L L S G EAGV + + + +LRG GR ++AS + + ALK + RD
Sbjct: 113 MLLALTLATTSPAGKALAEAGVRAEALNAAINELRG--GRSADTASAEDRYDALKKFARD 170
Query: 171 LVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD 228
L + A GKLDPVIGRDEEIRR +++L+RRTKNNPVLIGEPGVGKTA+ EGLA RI GD
Sbjct: 171 LTQAARDGKLDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIAEGLALRIANGD 230
Query: 229 VPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAG 288
VP L D +++ALDMG+L+AGAKYRGEFEERLK VL EV+ AEG++ILFIDE+H ++GAG
Sbjct: 231 VPDGLKDRKVMALDMGSLIAGAKYRGEFEERLKGVLDEVKGAEGQIILFIDEMHTLIGAG 290
Query: 289 RTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTV 348
++EG+MDA NL KP LARG+L CIGATTL+EYRKYVEKD A +RRFQ V+V EP+V DT+
Sbjct: 291 KSEGAMDAGNLLKPALARGELHCIGATTLDEYRKYVEKDPALQRRFQPVFVGEPTVEDTI 350
Query: 349 SILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDS 408
SILRGLKEKYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA + +R++++S
Sbjct: 351 SILRGLKEKYELHHGVRITDGAIVSAATLSNRYITDRFLPDKAIDLMDEAASRLRMEVES 410
Query: 409 QPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKE 468
+PEEI+ L+R+ +QL+IE AL+KE D ASK RL + +L +L ++ L R++ EK+
Sbjct: 411 KPEEIETLDRRIIQLKIEREALKKETDAASKDRLDALEADLVELEEQSAELTQRWQGEKD 470
Query: 469 RIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLML 528
+I+ +LK++ + L +A+RR DLARA +L YG I +E A+ + ML
Sbjct: 471 KINAEAKLKEQLDAARMELDQAQRRGDLARAGELSYGVIPNLEKALAGA--QSASAGAML 528
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRS 577
E V + IA VVSRWTGIPV ++ + E+E+L IG +A+ AV+ +V RS
Sbjct: 529 REEVTSEDIASVVSRWTGIPVDKMLEGEREKLLAMEDELGKRVIGQKDAIEAVSRAVRRS 588
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGL P +P GSFLFLGPTGVGKTEL KALA LFDD++ +VRIDMSE+ME+HSV+RLI
Sbjct: 589 RAGLQDPNRPLGSFLFLGPTGVGKTELTKALAGFLFDDDSAMVRIDMSEFMEKHSVARLI 648
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTV
Sbjct: 649 GAPPGYVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHGDVFNVLLQVLDDGRLTDGQGRTV 708
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF NT+II+TSNLG++ L + G+ ++ DQV++ VR HFRPE LNRLDEI++F L
Sbjct: 709 DFSNTLIILTSNLGSQFLANLGEGQ-AVETVEDQVMEVVRAHFRPEFLNRLDEIILFHRL 767
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
E + + +Q+ V L +R + L +TD A + YDP+YGARP++R ++K +
Sbjct: 768 GQEHMGPIVDIQVGRVGKLLKDRKIKLELTDGARAWLGRVGYDPVYGARPLKRAVQKYLQ 827
Query: 818 TELSRMLVREEIDENSTVYID 838
L+ L++ E+ + S + ID
Sbjct: 828 DPLAEALLKGEVPDGSALRID 848
>gi|417942555|ref|ZP_12585822.1| Negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve CECT 7263]
gi|376166873|gb|EHS85750.1| Negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve CECT 7263]
Length = 889
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/863 (52%), Positives = 605/863 (70%), Gaps = 35/863 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT EA+ A + A++AG+AQ LH+ ALL +G+ I AGG+ A A
Sbjct: 4 KFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVVRSLIKAAGGDPQAIGA-- 61
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
A+ LPS + + P AS L I +A+ + GD +++ + L++G+ + +
Sbjct: 62 AVRNALVALPSASGSSTSQPQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q ++ ++ GV A ++ V +RG G KV S + +++AL+ Y DL A GKLD
Sbjct: 122 QSAEILEKNGVTAASLRKAVPGVRG--GAKVTSPDAEGSYKALEKYSTDLTAAAKEGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L +LI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQGKKLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL E++ A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 240 SLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 300 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L+RK
Sbjct: 360 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ E+ +++ L+ K
Sbjct: 420 VTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAK 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG-----------NQSDENLML 528
++L + R +LA A+ + YG I ++ + E N +DE M+
Sbjct: 480 LDDLRVQADKFTREGNLADASKILYGEIPAIQKELAAAESADAESADAGAENPADEP-MV 538
Query: 529 TETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRS 577
+ V D +AE+VS WTGIPV RL G+NEK +R+IG EA+ AV+++V RS
Sbjct: 539 PDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLHMEDYLGKRVIGQEEAIVAVSDAVRRS 598
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAG+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLI
Sbjct: 599 RAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLI 658
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GA PGYVG+E+GGQLTEAVRRRPYSVVLFDEVEKA+ +F+ LLQVLDDGRLTDGQGRTV
Sbjct: 659 GAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+NT++IMTSNLG++ L++ M + V+ V +F+PE LNRLD+IV+F PL
Sbjct: 719 DFKNTILIMTSNLGSQFLVNEDM---DADAKKKAVMDAVHMNFKPEFLNRLDDIVMFHPL 775
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ E+L + +Q+K VA RL +R + L VTD+A + + YDP YGARP+RR ++ +V
Sbjct: 776 TREELGGIVDIQVKGVAQRLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVG 835
Query: 818 TELSRMLVREEIDENSTVYIDAS 840
+L+RML+ ++ + TV +D +
Sbjct: 836 DQLARMLLAGKVHDGDTVLVDQT 858
>gi|225452950|ref|XP_002284243.1| PREDICTED: chaperone protein ClpB3, chloroplastic-like [Vitis
vinifera]
Length = 976
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/859 (50%), Positives = 604/859 (70%), Gaps = 32/859 (3%)
Query: 6 FTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAERV 65
FT +AI + E+A H HL ALL +G+ + + AG +N R+
Sbjct: 86 FTEMAWQAIVSSPEVAKENKHQIVETEHLMKALLEQKNGLARRIFSKAGVDNT-----RL 140
Query: 66 FNQAMKKLPSQTPAPDEIPASTT---LIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ 122
+ K + Q E S L +I+RA+ +K +GD+ ++V+ L+L ++D +
Sbjct: 141 LDATDKFIQRQPKVIGESAGSMLGRDLESLIQRAREYKKEYGDSFVSVEHLVLAFVQDQR 200
Query: 123 IG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGKLD 179
G LFK+ ++ +KS +E +RG++ +V + ++AL+ YG+DL + +AGKLD
Sbjct: 201 FGKQLFKDFQISQKALKSAIEAIRGRQ--QVIDQDPEGKYEALEKYGKDLTAMAKAGKLD 258
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L + +LI
Sbjct: 259 PVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALMNRKLI 318
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LDMGAL+AGAK+RGEFE+RLKAVLKEV E++G+ ILFIDEIH V+GAG T G+MDA NL
Sbjct: 319 SLDMGALIAGAKFRGEFEDRLKAVLKEVTESDGQTILFIDEIHTVVGAGATNGAMDAGNL 378
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +P+V DT+SILRGL+E+YE
Sbjct: 379 LKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTISILRGLRERYE 438
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDEA A +++++ S+P +D + R
Sbjct: 439 LHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEINRS 498
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
++LE+E +L + DKASK RL + EL L++K L +++ EK + ++ +K++
Sbjct: 499 VLKLEMERLSLTNDTDKASKDRLSRLEAELSLLKEKQAELSEQWEHEKSVMTRLQSIKEE 558
Query: 480 REELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGPD 535
+ + +Q+AER YDL RAA+L+YG++ +++E A +L+ ML E V +
Sbjct: 559 IDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLENAEKELDEYMKSGKSMLREEVTGN 618
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
IAE+VS+WTGIPV++L Q+E+ +R++G AV +VAE++ RSRAGL P
Sbjct: 619 DIAEIVSKWTGIPVSKLQQSEREKLLHLEEELHKRVVGQDPAVRSVAEAIQRSRAGLSDP 678
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P SF+F+GPTGVGKTELAKALA +F+ E LVRIDMSEYME+H+VSRLIGAPPGYV
Sbjct: 679 HRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGYV 738
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTE VRRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QGRTV F NTVI
Sbjct: 739 GYEEGGQLTETVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVI 798
Query: 705 IMTSNLGAEHLLS----GMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
IMTSN+G++++L+ + + + + +V+ R FRPE +NR+DE +VF PL +
Sbjct: 799 IMTSNVGSQYILNMDDETLPKETAYETIKQRVMDAARSIFRPEFMNRVDEYIVFQPLDRD 858
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q+ + +LQ++ V +RLA+R + L VT+ A+ ++ + YDP YGARP++R +++ V EL
Sbjct: 859 QISSIVKLQLERVQLRLADRKMKLQVTETAIQLLGSLGYDPNYGARPVKRVIQQNVENEL 918
Query: 821 SRMLVREEIDENSTVYIDA 839
++ ++R E + TV ID
Sbjct: 919 AKGILRGEFKDEDTVLIDT 937
>gi|392374139|ref|YP_003205972.1| chaperone [Candidatus Methylomirabilis oxyfera]
gi|258591832|emb|CBE68133.1| Chaperone [Candidatus Methylomirabilis oxyfera]
Length = 865
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/861 (52%), Positives = 606/861 (70%), Gaps = 29/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DKFT K EAI A +LA H HL +AL+ G+ Q I G + Q
Sbjct: 4 MRFDKFTFKAQEAIQQAQKLAEQLEHQAIDVEHLLLALVQQAEGV-VQPILGKMGTDPRQ 62
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A R + +K+LP S P P ++ + L KV+ A + + D +++ + L+L +
Sbjct: 63 VASR-LTEELKRLPRVSGLP-PGQVHITPRLEKVLSAALSEAERLKDEYVSTEHLLLAIA 120
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ +G + +EAG+ + + ++++RG + +V + +QAL+ Y RDL + A
Sbjct: 121 DAGGGAVGRVLREAGITKDTIYAALQEVRGSQ--RVTDQVPEEKYQALERYARDLTDLAR 178
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD+EIRRVV++L+RRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L
Sbjct: 179 KGKLDPVIGRDDEIRRVVQVLARRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPESLK 238
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ R++ALD+GALVAG+KYRGEFE+RLKAVL+EV E +G+++LFIDE+H ++GAG EG++
Sbjct: 239 NKRVLALDIGALVAGSKYRGEFEDRLKAVLREVTEQQGQIVLFIDELHTLVGAGAAEGAV 298
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA+N+ KP LARG+LRC+GATTL+EY K VEKDAA ERRFQ V V EPSV D++SILRGL
Sbjct: 299 DASNMLKPALARGELRCVGATTLDEYHKRVEKDAALERRFQPVLVGEPSVEDSISILRGL 358
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGVRI+D ALV AA LS RYIT R LPDKAIDL+DEA + +R+++DS P E+D
Sbjct: 359 KERYEVHHGVRIRDSALVAAAILSNRYITDRFLPDKAIDLIDEAASRLRMEIDSMPTELD 418
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L R+ Q+E+E HAL+KE D S+ RL + EL ++R K + L R+++EK I IR
Sbjct: 419 ELSRRIRQIEVEYHALKKETDSESQERLARLADELVEIRIKEEGLKTRWEQEKGFIQRIR 478
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTE 530
LK++ E Q AER+ DL + A+LRYG + +E+E+ LE Q ML E
Sbjct: 479 GLKERIEAAKVQEQMAERQGDLGKVAELRYGVVTLLQKELESEKRGLEQVQQ-VGAMLKE 537
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRA 579
V + +A+VVS+WTG+PV R+ + E +ER++G EA+ AV++++ R+R+
Sbjct: 538 EVDEEDVAQVVSKWTGVPVARMLEGETQKLLTMEEKLRERVVGQYEAIGAVSDAIRRARS 597
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P GSF+FLGPTGVGKTELA+ALA LFDDE ++R+DMSEYME+H+VSRLIGA
Sbjct: 598 GLQDPNRPIGSFMFLGPTGVGKTELARALAAFLFDDERAMIRLDMSEYMEKHTVSRLIGA 657
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG EEGGQLTEAVRRRPY V+L DE+EKAH VFN LLQ+LDDGRLTDGQGRTVDF
Sbjct: 658 PPGYVGFEEGGQLTEAVRRRPYCVLLLDEIEKAHTDVFNILLQILDDGRLTDGQGRTVDF 717
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSNLG++ + +G + R +VL+ VR HFRPE LNR+DEI++F LS
Sbjct: 718 KNTIIIMTSNLGSQVIQE--LGGRDDEEMRRRVLEAVRTHFRPEFLNRVDEILIFHTLSL 775
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
Q++ + +Q++ V RL ER + L VTDAA D + E YDP++GARP+RR +++ ++
Sbjct: 776 AQIKAIVEIQLRRVGKRLVERKLDLEVTDAAKDFLAKEGYDPVFGARPLRRAIQRALLDP 835
Query: 820 LSRMLVREEIDENSTVYIDAS 840
L+R L+ E E TV +DA+
Sbjct: 836 LARRLLEHEFAEGDTVRVDAA 856
>gi|169335290|ref|ZP_02862483.1| hypothetical protein ANASTE_01702 [Anaerofustis stercorihominis DSM
17244]
gi|169258028|gb|EDS71994.1| ATP-dependent chaperone protein ClpB [Anaerofustis stercorihominis
DSM 17244]
Length = 862
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/857 (49%), Positives = 605/857 (70%), Gaps = 24/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN + +T K+ AI A +A ++ HL ALL D G+ + ++ G +
Sbjct: 1 MNANDYTEKSLLAIQNAQNIAMDNNNSVIEAEHLLYALLEDNGGLIGEILSKMGVD--LN 58
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+R + P + + + AS L +VI A+ K D +++V+ L L L
Sbjct: 59 GLKREVKNKIDSFPRVSGGNENNLYASNNLNRVINLAEKIAKNMKDEYVSVEHLFLALFN 118
Query: 120 D--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ S I D+F V ++ +RG GR V + + + T+ L+ YG DLVE A
Sbjct: 119 EGGSFIKDVFNRYKVTKEMFTKQLSLVRG--GRTVTNQNPENTYNVLEKYGSDLVELAKN 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
KLDPVIGRD+EIR V+RILSR+TKNNPVLIGEPGVGKTA+ EGLA RIVRGDVP+NL D
Sbjct: 177 NKLDPVIGRDDEIRNVIRILSRKTKNNPVLIGEPGVGKTAIAEGLALRIVRGDVPNNLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ +LDMGALVAGAK+RGEFEER+KAVL E++++EGK+ILFIDE+H ++GAG+T+G+MD
Sbjct: 237 RSIFSLDMGALVAGAKFRGEFEERIKAVLDEIKKSEGKIILFIDELHTIVGAGKTDGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KP+LARG+L CIGATTL EYR+Y+EKDAA ERRFQ V + EP+V DT++ILRGLK
Sbjct: 297 AGNLLKPLLARGELHCIGATTLNEYRQYIEKDAALERRFQPVMIGEPTVEDTIAILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE +HGV+I D+AL+ AA LS RYIT R LPDKAIDL+DEACA ++ ++DS P E+D
Sbjct: 357 ERYEIYHGVKITDQALISAATLSNRYITDRFLPDKAIDLIDEACALIKTEMDSMPTELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ RK MQ +IE AL+KEKD+ SK RL E+ KE+ +L+ K + ++ KEK+ I + +R
Sbjct: 417 VNRKIMQYQIEATALKKEKDELSKKRLEEINKEIAELQSKFNEMKAKWLKEKDNIGKAQR 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQE-VEAAIGQLEGNQSDENLMLTETVGP 534
L+++ +++ +++A+R +L +AA+L+YG + + + + E ++ N +L + V
Sbjct: 477 LREEIDKVNVEIEQAQRVNNLNKAAELKYGKLPDLQKQLKEEEEKSKEKNNTLLRDKVSD 536
Query: 535 DQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA++VS+WT IPV++L G+ EK ER+IG EAV V+++++RSRAG+
Sbjct: 537 EEIAKIVSKWTHIPVSKLVEGEREKLLHLEDTLHERVIGQDEAVRLVSDAIIRSRAGIQD 596
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAK LA LFD+E ++RIDMSEYME+ SVSRLIGAPPGY
Sbjct: 597 PSKPIGSFLFLGPTGVGKTELAKTLAYTLFDNEQNIIRIDMSEYMEKFSVSRLIGAPPGY 656
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRT+DF+NT+
Sbjct: 657 VGYDEGGQLTEAVRRNPYSVVLFDEIEKAHPDVFNILLQVLDDGRVTDSQGRTIDFKNTI 716
Query: 704 IIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
II+TSNLG+++LL G +T + +D + + ++ +FRPE LNRLDEIV++ PL ++
Sbjct: 717 IILTSNLGSDYLLESTEKYGDITDE-TKDNIDKLLKANFRPEFLNRLDEIVIYKPLKKDE 775
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ L +KD+ R+ ++ + L +TD A + ++ YDPI+GARP++R+++ KV T ++
Sbjct: 776 ISKIVDLMLKDLEKRMEDKFLHLNITDKAKEFIIDNGYDPIFGARPLKRFIQSKVETLIA 835
Query: 822 RMLVREEIDENSTVYID 838
+ ++ + +T+ +D
Sbjct: 836 KSILSNNFESGTTLTVD 852
>gi|357033114|ref|ZP_09095044.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Gluconobacter
morbifer G707]
gi|356413271|gb|EHH66928.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Gluconobacter
morbifer G707]
Length = 868
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/859 (52%), Positives = 606/859 (70%), Gaps = 22/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT ++ + A +A H Q TP HL ALL D G + I AGG+ +
Sbjct: 1 MDIQKFTERSQGFLQAAQTIALRDYHQQLTPEHLLKALLDDEQGAASGLIRAAGGD--PK 58
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
++ + A+ KLP Q + A+ ++++ A+AA KA GD+H+A D+L++ +
Sbjct: 59 VVQQANDAALAKLPQVQGGGAGQPQATPDFVRLLDSAEAAAKAAGDSHVAQDRLLIAIAA 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAG 176
++ G + A ++ V ++R +GR V SAS + TF ALK Y RD+ V QAG
Sbjct: 119 SNTPAGKALAQGKADAAALERAVAQIR--KGRTVTSASAENTFDALKKYARDVTAVAQAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++L+RR+KNNPVLIGEPGVGKTA+VEGLA RIV GDVP L +
Sbjct: 177 KLDPVIGRDEEIRRTIQVLARRSKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEALRNK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L++LDMGAL+AGAKYRGEFEERLKAVLKE+E AEG++ILFIDE+H ++GAGR++G+MDA
Sbjct: 237 KLMSLDMGALIAGAKYRGEFEERLKAVLKEIEAAEGEIILFIDEMHTLVGAGRSDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG L C+GATTL+EYRKY+EKDAA RRFQ V+V EPSV DT+SILRG+KE
Sbjct: 297 SNLIKPELARGTLHCVGATTLDEYRKYIEKDAALARRFQPVFVGEPSVADTISILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PE +D L
Sbjct: 357 KYELHHGVRITDNAIVAAATLSNRYITDRFLPDKAIDLIDEAASRLRMQIDSKPEALDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE A+ KE D ASK RLV + EL DL ++ + + EK+R++ I++L
Sbjct: 417 DRRIIQLKIEREAIRKEDDTASKDRLVALEAELADLEEQSNAMSADWHAEKDRVNAIQKL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI--GQLEGNQSDENLMLTETVGP 534
K++ + ++ A+R+ +L +A++L YGAI ++EA I Q E + + ++ + +TV
Sbjct: 477 KEQLDTARSDVEVAQRQGNLGKASELMYGAIPQLEAQIAKAQEEEDAASKSGLFADTVTD 536
Query: 535 DQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGR 583
+A VVSRWTG+PV R+ + E +ER++G +A+ AV+ +V R+RAGL
Sbjct: 537 QGVAAVVSRWTGVPVDRMLEGERAKLMRMEDVLRERVVGQEQALVAVSNAVRRARAGLQD 596
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAKALA+ LFDDE L+RIDMSE+ME+H+VSRLIGAPPGY
Sbjct: 597 PNRPIGSFLFLGPTGVGKTELAKALAQFLFDDEKALLRIDMSEFMEKHAVSRLIGAPPGY 656
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGR VDFRNT+
Sbjct: 657 VGYDEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGRVVDFRNTI 716
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
II+TSNLG++ L + G+ T + R QV+ VR HFRPE LNRLDEI++F L +
Sbjct: 717 IILTSNLGSDILANQPDGEST-DLVRAQVMAVVRSHFRPEFLNRLDEIILFSRLQRVDMD 775
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +Q+ + L +R + L + A + + YDP+YGARP++R +++ + L+ M
Sbjct: 776 RIVTIQIGRLQKLLEDRKITLDLDQKATEWLAEAGYDPVYGARPLKRVIQRSLQNPLAGM 835
Query: 824 LVREEIDENSTVYIDASPK 842
L+ I + V + + K
Sbjct: 836 LLDGSIHDGEEVKVSSEDK 854
>gi|291457035|ref|ZP_06596425.1| ATP-dependent chaperone protein ClpB [Bifidobacterium breve DSM
20213 = JCM 1192]
gi|291380870|gb|EFE88388.1| ATP-dependent chaperone protein ClpB [Bifidobacterium breve DSM
20213 = JCM 1192]
Length = 894
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/863 (52%), Positives = 605/863 (70%), Gaps = 35/863 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT EA+ A + A++AG+AQ LH+ ALL +G+ I AGG+ A A
Sbjct: 9 KFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVVRSLIEAAGGDPQAIGA-- 66
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
A+ LPS + + P AS L I +A+ + GD +++ + L++G+ + +
Sbjct: 67 AVRNALVALPSASGSSTSQPQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPN 126
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q ++ ++ GV A ++ V +RG G KV S + +++AL+ Y DL A GKLD
Sbjct: 127 QSAEILEKNGVTAASLRKAVPGVRG--GAKVTSPDAEGSYKALEKYSTDLTAAAKEGKLD 184
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L +LI
Sbjct: 185 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQGKKLI 244
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL E++ A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 245 SLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNM 304
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 305 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 364
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L+RK
Sbjct: 365 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRK 424
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ E+ +++ L+ K
Sbjct: 425 VTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAK 484
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG-----------NQSDENLML 528
++L + R +LA A+ + YG I ++ + E N +DE M+
Sbjct: 485 LDDLRVQADKFTREGNLAEASKILYGEIPAIQKELAAAESADAESADAGAENPADEP-MV 543
Query: 529 TETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRS 577
+ V D +AE+VS WTGIPV RL G+NEK +R+IG EA+ AV+++V RS
Sbjct: 544 PDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRS 603
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAG+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLI
Sbjct: 604 RAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLI 663
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GA PGYVG+E+GGQLTEAVRRRPYSVVLFDEVEKA+ +F+ LLQVLDDGRLTDGQGRTV
Sbjct: 664 GAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 723
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+NT++IMTSNLG++ L++ M + V+ V +F+PE LNRLD+IV+F PL
Sbjct: 724 DFKNTILIMTSNLGSQFLVNEDM---DADAKKKAVMDAVHMNFKPEFLNRLDDIVMFHPL 780
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ E+L + +Q+K VA RL +R + L VTD+A + + YDP YGARP+RR ++ +V
Sbjct: 781 TREELGGIVDIQVKGVAQRLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVG 840
Query: 818 TELSRMLVREEIDENSTVYIDAS 840
+L+RML+ ++ + TV +D +
Sbjct: 841 DQLARMLLAGKVHDGDTVLVDQT 863
>gi|52144162|ref|YP_082667.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus E33L]
gi|51977631|gb|AAU19181.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
cereus E33L]
Length = 866
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/861 (52%), Positives = 616/861 (71%), Gaps = 29/861 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IAE+VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIAEIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +T+AA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVQLTEAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYID 838
T+L+R L+ I +NS V +D
Sbjct: 835 TKLARELIAGTITDNSHVVVD 855
>gi|344199838|ref|YP_004784164.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrivorans SS3]
gi|343775282|gb|AEM47838.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrivorans SS3]
Length = 866
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/870 (51%), Positives = 607/870 (69%), Gaps = 32/870 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DK T K +A A LA H Q P+HL +A L GI ++ AG A
Sbjct: 1 MRTDKLTTKFQQAFQDAQSLALGQDHQQMDPVHLLIAFLDQEGGIARPLLSKAGVRVDAL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ N+ ++ LP P E+ L ++ A + GDT+++ + +L L++D
Sbjct: 61 RNQ--LNRVLESLPKVQGHPGEVQVGRDLTNMLNLADKMGQKRGDTYISTEHFLLALMDD 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ G L KEAG + ++ V L G G K+ + + QAL+ Y D E+A GK
Sbjct: 119 KGEAGRLLKEAGATIKDLEQAVHDLHG--GEKINDVNAEEQRQALEKYTVDYTERASQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD+EIRR +++L RR+KNNPVLIGEPGVGKTA+VEGLA R++ G+VP +L D R
Sbjct: 177 LDPVIGRDDEIRRTIQVLLRRSKNNPVLIGEPGVGKTAIVEGLALRLINGEVPESLRDKR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ LD+GAL+AGAK+RGEFEERLK++L ++E++EGK+ILFIDEIH+++GAG+ EGSMDA
Sbjct: 237 LLGLDLGALIAGAKFRGEFEERLKSLLNDLEKSEGKIILFIDEIHMLVGAGKAEGSMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L CIGATTL+EYRK++EKDAA ERRFQ+V V EPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCIGATTLDEYRKHIEKDAALERRFQRVLVDEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AAQLS RYIT R+LPDKAIDL+DEA + +++++DS+P+E+D LE
Sbjct: 357 YEAHHGVRITDPALVAAAQLSHRYITDRNLPDKAIDLMDEAASRIKMEIDSKPQELDELE 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL IE ALEKEKD+AS+ RL ++ ++ +L K Q L +K EK I+ +++
Sbjct: 417 RRIIQLNIERVALEKEKDEASRKRLGILQTQISELGRKYQELEEVWKGEKLAIEGTSQIQ 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE------GNQSDENLMLTET 531
++ + L A R DL R A+L+Y +I +EA + E G+ + L+ TE
Sbjct: 477 KELDRKRVELDTARRANDLERMAELQYSSIPALEAQLRNAEIHAESAGSGAKPTLLRTE- 535
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
VG ++IAEVV+RWTGIPV+++ + EKE+L +G +EAV AV+ ++ RSRAG
Sbjct: 536 VGEEEIAEVVARWTGIPVSKMLEGEKEKLLKMEERLQARVVGQSEAVAAVSNAIRRSRAG 595
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSFLFLGPTGVGKTEL+KALAE LFD E+ LVR+DMSE+ME+HSV+RLIGAP
Sbjct: 596 LSDPRRPNGSFLFLGPTGVGKTELSKALAEFLFDSEDHLVRVDMSEFMEKHSVARLIGAP 655
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGG LTEAVRR+PYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFR
Sbjct: 656 PGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 715
Query: 701 NTVIIMTSNLGAEHLLS-GMMGKVT-MQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
NTVI+MTSNLG++ + G G M+VA V+ V+ HFRPE LNR+DE+V+F PL+
Sbjct: 716 NTVIVMTSNLGSDRIQEFGRKGDYDGMRVA---VMDVVQDHFRPEFLNRIDELVIFHPLT 772
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
QLR++ +QM + RL ER + L ++D ALD + YDP YGARP++R +++++
Sbjct: 773 AVQLREITEIQMGFLRARLRERDMGLVLSDGALDRLAEVGYDPAYGARPLKRVIQREIEN 832
Query: 819 ELSRMLVREEIDENSTVYIDASPKGDNLVY 848
L++ L+R + I+ +GD+ +
Sbjct: 833 PLAQQLLRGDFGPGEI--IEVLLEGDSFTF 860
>gi|229090214|ref|ZP_04221462.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-42]
gi|228693150|gb|EEL46863.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-42]
Length = 866
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/874 (52%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IAE+VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIAEIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +T+AA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVQLTEAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|402309267|ref|ZP_10828262.1| ATP-dependent chaperone protein ClpB [Eubacterium sp. AS15]
gi|400372762|gb|EJP25700.1| ATP-dependent chaperone protein ClpB [Eubacterium sp. AS15]
Length = 865
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/869 (49%), Positives = 611/869 (70%), Gaps = 27/869 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DKFT K+ AI A LA + + + +HL ALL GI + + +
Sbjct: 1 MNMDKFTQKSASAIMEAQNLALANNNQEVDSIHLFKALLVQEDGIIPKILQLMNINTTSL 60
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
E + + KLP + + + AS ++ A+ + D +++V+ L L + E
Sbjct: 61 INET--DTVISKLPKVSGSSVTNVYASRKFSSLLANAEKERVDFKDEYVSVEHLFLAMFE 118
Query: 120 D--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ S + ++FK+ + + ++ +RG +KV S + + T+ L+ YGR+LVE A
Sbjct: 119 EKGSALTEIFKKFDIKRSVFLEKLISVRG--NQKVTSENPEDTYNVLEKYGRNLVEMAKK 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGR++EIRR +RILSRRTKNNPVLIGEPGVGKTAVVEGLA RIV+ DVP +L D
Sbjct: 177 GKLDPVIGREDEIRRAIRILSRRTKNNPVLIGEPGVGKTAVVEGLAMRIVKNDVPDSLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ ALDMG+L+AGAKYRGEFEERLKAVL EVE+++G +I+FIDEIH ++GAG+TEGSMD
Sbjct: 237 KTIFALDMGSLIAGAKYRGEFEERLKAVLTEVEKSDGNIIMFIDEIHTIVGAGKTEGSMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+L CIGATT++EYRKY+EKD A ERRFQ V V EP+V DT+SILRG+K
Sbjct: 297 AGNLLKPMLARGELHCIGATTIDEYRKYIEKDPALERRFQVVMVDEPTVEDTISILRGIK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EK+E HHGVRI D A++ A LS +YI+ R LPDKAIDL+DEA A +R Q+DS P E+D+
Sbjct: 357 EKFEIHHGVRISDSAIISCAVLSNKYISDRFLPDKAIDLMDEAAAMIRTQIDSLPTELDD 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ RK MQLEIE+ AL+KE D+ SK RL + +EL L+ + E++ I ++
Sbjct: 417 MSRKIMQLEIEVQALKKESDEQSKKRLATIEEELSSLKQDYANQKASWDVERQSIQGVKA 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE--NLMLTETVG 533
L+++ E++ + A+R YDL + L+YG + E+E + + Q ++ N +L E V
Sbjct: 477 LQEEIEDVKHQMDIAQRNYDLETLSRLKYGKLVELENKLAEQIKVQDEKKNNALLKEEVT 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
++IA +VS+WTGIPV +L + E+++L IG EAV +VA+S+LR+R+GL
Sbjct: 537 EEEIATIVSQWTGIPVQKLVETERDKLLHLQDILHQDVIGQDEAVKSVADSILRARSGLK 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P++P GSF+FLGPTGVGKT+LAK+L++ LFD E+ ++RIDMSEY E+H+V+RLIGAPPG
Sbjct: 597 DPRKPIGSFIFLGPTGVGKTQLAKSLSKALFDSEDNIIRIDMSEYQEKHTVARLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRR+PYS++LFDE+EKAH VFN LLQ+LDDGRLTD +GRTV+F++T
Sbjct: 657 YVGYEEGGQLTEAVRRKPYSIILFDEIEKAHSEVFNVLLQLLDDGRLTDSKGRTVNFKDT 716
Query: 703 VIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
++IMTSN+G++ LL + +VT Q A+ +V +R F+PE LNR+D+I++F+PL+ +
Sbjct: 717 IVIMTSNIGSQILLDSVKEHNEVTDQ-AKKEVEDMLRFSFKPEFLNRIDDIIMFNPLTKD 775
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q+ ++ L +KD+ RL +R + L +TD A +++ ESY P GARP++R++++ + T L
Sbjct: 776 QISQIVELCLKDIQARLQDRQITLNITDKAKNLIAEESYTPQLGARPVKRYIQRNIETLL 835
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYR 849
+ +++ +++NSTV ID + DN+V +
Sbjct: 836 GKEIIKGTLEDNSTVTIDV--EDDNIVIK 862
>gi|302695231|ref|XP_003037294.1| hypothetical protein SCHCODRAFT_73165 [Schizophyllum commune H4-8]
gi|300110991|gb|EFJ02392.1| hypothetical protein SCHCODRAFT_73165 [Schizophyllum commune H4-8]
Length = 901
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/884 (50%), Positives = 612/884 (69%), Gaps = 35/884 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSG--------IFAQAINNAGGE 56
+FT KT E +A A +LA +AQ P H+A ALL++ +G +F I AGG+
Sbjct: 6 EFTDKTQETLAAAIQLAKDYANAQVHPAHIAFALLNEGAGEGNTGNHSLFTSIIEKAGGD 65
Query: 57 NAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILG 116
+ +R + + +LP+Q+P PDE S+ +KV+R AQ+ QK D+++A D LIL
Sbjct: 66 --PTTFKRSVQKLIVRLPTQSPPPDETTLSSAALKVLREAQSLQKTMHDSYIAQDHLILA 123
Query: 117 LLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
L++D L K+ G+ A +K+ VE+ RG R+V+S + + F AL+ Y DL A
Sbjct: 124 LVKDPSFAQLLKDNGITEATIKTAVEQTRGN--RRVDSKTAEQGFDALQKYAVDLTALAE 181
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GK+DPVIGRD EIRRV+RIL RRTKNNPVLIGEPGVGKT++ EGLAQRIV+ DVP++L
Sbjct: 182 EGKIDPVIGRDNEIRRVIRILCRRTKNNPVLIGEPGVGKTSIAEGLAQRIVKRDVPASLF 241
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGK----VILFIDEIHLVL-GAGR 289
RL +LDMGAL+AGAKY+GE+EER+K+VL EVE+A VILFIDE+HL++ G G
Sbjct: 242 -ARLWSLDMGALMAGAKYKGEYEERIKSVLDEVEKAAENGGQGVILFIDELHLIMAGRGS 300
Query: 290 TEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVS 349
G MDA NLFKP+LARG+LRCIGATTL EYRKY+E DAA ERRF QV V EPSV +T++
Sbjct: 301 EGGGMDAGNLFKPLLARGKLRCIGATTLAEYRKYIETDAALERRFAQVIVNEPSVSETIN 360
Query: 350 ILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQ 409
ILRG++EKYE HHGVRI D AL+ AA L+ RY+T R LPD AIDLVDEACA+VRV +++
Sbjct: 361 ILRGIREKYEVHHGVRIMDGALISAATLAHRYLTSRRLPDAAIDLVDEACASVRVTRETE 420
Query: 410 PEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKER 469
PE ID L+R++++LE+E+HALE+EKD SK RL+ RK + D+ ++LQPL +++ EK+R
Sbjct: 421 PEAIDLLQRRKLELEVEIHALEREKDAESKERLLAARKAIADVDEQLQPLKAQFENEKKR 480
Query: 470 IDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLML- 528
+EI ++++ +EL +++AERRYDLA A+D++Y A+ +++ + LE +++E+
Sbjct: 481 GEEINNVRRRIDELKAKVEDAERRYDLATASDIKYYALPDLQKRLEALEAKKAEEDAAAG 540
Query: 529 --TETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVL 575
+ V P+QIAE+V+RWT IPVTRL +EKE+L +G A+AV AVA ++
Sbjct: 541 VGHDVVTPEQIAEIVARWTSIPVTRLMSSEKEKLLRMERILAKEVVGQADAVKAVANAIR 600
Query: 576 RSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSR 635
SR+GL +P SFLF GP+G GKT +AK LA+ LFD + ++R+D SEY E+HS+SR
Sbjct: 601 LSRSGLANQNRPIASFLFAGPSGTGKTLMAKTLAQILFDSSDAMIRVDGSEYSEKHSISR 660
Query: 636 LIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGR 695
LIGAPPGYVGH+ GGQLTE +RR+PYS++L DE+EKA LQVLDDGRLTDGQGR
Sbjct: 661 LIGAPPGYVGHDSGGQLTEYIRRKPYSIILIDEIEKACREFVTLFLQVLDDGRLTDGQGR 720
Query: 696 TVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFD 755
VDF+NTVIIMTSNLGA +L G V V R+ V+ + HF PE +NR+DEIV+F
Sbjct: 721 VVDFKNTVIIMTSNLGAAYLNDVGEGPVNPAV-RELVMGAISGHFPPEFINRIDEIVIFR 779
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
L+ + + K+ L++ +V RLA+R + L + D A +++ Y P YGARP+ R ++ +
Sbjct: 780 ALARKHILKIVDLRIAEVEQRLADRKIKLDIADDAKQYLMSVGYSPQYGARPLNRAIQSE 839
Query: 816 VVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDA 859
++ LS ML+ E++ + TV + + LV VDA
Sbjct: 840 LLNPLSVMLLSEQVRDGETVQVRFDGPHNRLVIVPNHAASNVDA 883
>gi|255570232|ref|XP_002526076.1| chaperone clpb, putative [Ricinus communis]
gi|223534573|gb|EEF36270.1| chaperone clpb, putative [Ricinus communis]
Length = 973
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/859 (51%), Positives = 603/859 (70%), Gaps = 31/859 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT + I + ++A H HL ALL +G+ + + G +N R
Sbjct: 84 EFTELAWQGIVSSPDVAKENKHQIVETEHLMKALLEQKNGLARRIFSKVGVDNT-----R 138
Query: 65 VFNQAMKKLPSQTPAPDEIPASTT---LIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ K + Q E S L +I+RA+ +K +GD+ ++V+ L+L +D
Sbjct: 139 LLEATDKFIQRQPKVLGESAGSMLGRDLEALIQRARDYKKEYGDSFVSVEHLVLAFAQDQ 198
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGKL 178
+ G LF++ +++ VKS VE +RG++ + G ++AL+ YG+DL + +AGKL
Sbjct: 199 RFGKQLFRDFQISLQTVKSAVESIRGRQSVIDQDPEG--KYEALEKYGKDLTAMAKAGKL 256
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L + +L
Sbjct: 257 DPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALMNRKL 316
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAKYRGEFE+RLKAVLKEV E++G++ILFIDEIH V+GAG T G+MDA N
Sbjct: 317 ISLDMGALIAGAKYRGEFEDRLKAVLKEVTESDGQIILFIDEIHTVVGAGATNGAMDAGN 376
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +PSV DT+SILRGL+E+Y
Sbjct: 377 LLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTISILRGLRERY 436
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDEA A +++++ S+P +D ++R
Sbjct: 437 ELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEIDR 496
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
++LE+E +L + D+AS+ RL + EL L+ K L +++ EK + I+ +K+
Sbjct: 497 SVLKLEMEKLSLTNDTDRASRDRLSRLDAELSLLKKKQAELTEQWEHEKTVMTRIQSIKE 556
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG++ +++E A +L+ ML E V
Sbjct: 557 EIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLEIAEKELDEYMRSGKSMLREEVTG 616
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D IAEVVS+WTGIP+++L Q+E+ +R++G AV AVAE++ RSRAGL
Sbjct: 617 DDIAEVVSKWTGIPLSKLKQSEREKLLHLEEELHKRVVGQDPAVKAVAEAIQRSRAGLSD 676
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P++P SF+F+GPTGVGKTELAKALA +F+ E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 677 PRRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHAVSRLIGAPPGY 736
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTE VRRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QGRTV F NTV
Sbjct: 737 VGYEEGGQLTETVRRRPYAVILFDEIEKAHADVFNVFLQILDDGRVTDSQGRTVSFTNTV 796
Query: 704 IIMTSNLGAEHLLSG---MMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
IIMTSN+G++++L M +V + + +V++ R FRPE +NR+DE +VF PL
Sbjct: 797 IIMTSNVGSQYILDTDDDMPKEVAYETIKQRVMEAARSVFRPEFMNRVDEYIVFQPLDRS 856
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q+ + +LQ++ V R+A+R + L VT+AA+D++ + YDP YGARP++R +++ V EL
Sbjct: 857 QINSIVKLQLERVQQRVADRKMKLRVTEAAVDLLGSLGYDPNYGARPVKRVIQQYVENEL 916
Query: 821 SRMLVREEIDENSTVYIDA 839
++ ++R E + V ID
Sbjct: 917 AKGILRGEFKDEDAVLIDT 935
>gi|453329128|dbj|GAC88738.1| Clp protease ATP-binding subunit ClpB [Gluconobacter thailandicus
NBRC 3255]
Length = 866
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/861 (51%), Positives = 605/861 (70%), Gaps = 24/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE-NAA 59
M+ KFT ++ + A +A H Q TP HL ALL D G + I AGG+
Sbjct: 1 MDIQKFTERSQGFLQAAQTIALRDYHQQLTPEHLLKALLDDEQGAASGLIRAAGGDPKVV 60
Query: 60 QSAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q+A + A+ KLP Q + A+ ++++ A+AA K GD+H+A D+L++ +
Sbjct: 61 QAAN---DAALAKLPKVQGGGAGQPQATPDFVRLLDSAEAAAKNAGDSHVAQDRLLVAIA 117
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQA 175
+S G E + ++ V ++R +GR V SAS + TF ALK Y RD+ V QA
Sbjct: 118 ASNSPAGKALVEGKADASALERAVAQIR--KGRTVTSASAENTFDALKKYARDVTAVAQA 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++L+RR+KNNPVLIGEPGVGKTA+VEGLA RIV GDVP L +
Sbjct: 176 GKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEALRN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LDMGAL+AGAK+RGEFEERLKAVLKEVE AEG++ILFIDE+H ++GAGR++G+MD
Sbjct: 236 KKLMSLDMGALIAGAKFRGEFEERLKAVLKEVETAEGEIILFIDEMHTLVGAGRSDGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG L CIGATTL+EYRKY+EKDAA RRFQ V+V EPSV DT+SILRG+K
Sbjct: 296 ASNLIKPELARGTLHCIGATTLDEYRKYIEKDAALARRFQPVFVGEPSVADTISILRGIK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PE +D
Sbjct: 356 EKYELHHGVRITDNAIVSAATLSNRYITDRFLPDKAIDLIDEAASRLRMQIDSKPEALDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE A+ KE D ASK RL + EL DL ++ + + EK+R++ I++
Sbjct: 416 LDRRIIQLKIEREAIRKEDDTASKDRLQALEAELADLEEQSDAMGAEWHAEKDRVNAIQK 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI--GQLEGNQSDENLMLTETVG 533
LK++ + + A+R+ +LA+A++L YG I +EA I Q E + + ++ + ++V
Sbjct: 476 LKEQLDTARSDVDVAQRQGNLAKASELMYGLIPNLEAQIAKAQEEEDAASKSGLFADSVT 535
Query: 534 PDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLG 582
IA VVSRWTGIPV R+ + E ++R++G +A+ AV+ +V R+RAGL
Sbjct: 536 EQGIASVVSRWTGIPVDRMLEGERAKLMRMEDTLRDRVVGQEQALVAVSNAVRRARAGLQ 595
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTEL KALA+ LFDDE L+RIDMSE+ME+H+VSRLIGAPPG
Sbjct: 596 DPNRPIGSFLFLGPTGVGKTELTKALAQFLFDDEKALLRIDMSEFMEKHAVSRLIGAPPG 655
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGG LTEAVRRRPY V+LFDEVEKAH +FN LLQVLDDGRLTDGQGR VDFRNT
Sbjct: 656 YVGYDEGGVLTEAVRRRPYQVILFDEVEKAHEDIFNILLQVLDDGRLTDGQGRVVDFRNT 715
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+I++TSNLG++ L + G+ + + + QV+Q VR HFRPE LNRLDEI++F L +
Sbjct: 716 IIVLTSNLGSDVLANQEDGE-SPDLVQAQVMQVVRNHFRPEFLNRLDEIILFSRLQRADM 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++ +Q+ + L +R + L + + + + YDP+YGARP++R +++ + L+
Sbjct: 775 GRIVDIQLSRLRQLLEDRKITLELDEKGREWLAEAGYDPVYGARPLKRVIQRSLQNPLAG 834
Query: 823 MLVREEIDENSTVYIDASPKG 843
+L+ I + T+++ A KG
Sbjct: 835 LLLDGTIRDGDTIHVSAGDKG 855
>gi|407276252|ref|ZP_11104722.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus sp.
P14]
Length = 851
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/865 (53%), Positives = 597/865 (69%), Gaps = 38/865 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + A++AG+ + P HL VALL GI A + G +
Sbjct: 4 FNP---TTKTQAAMTAAMQSASAAGNPEIRPAHLLVALLDQTDGIAAPLLKAVGVDPTV- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
R +++LP T A + + AQ D +++ + +++GL
Sbjct: 60 -VHREAQTLVERLPRATGATQTPQLGREAVAALTAAQHLATELDDEYVSTEHVLVGLAGG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
DS + L G A ++ +RG +V S + T+QAL+ Y DL +A GK
Sbjct: 119 DSDVAKLLVGHGATPAALRDAFTTVRGSA--RVTSPDPEGTYQALEKYSTDLTARAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+IALD+G++VAGAKYRGEFEERLKAVL E++E+ G+VI FIDE+H ++GAG T E +MDA
Sbjct: 237 VIALDLGSMVAGAKYRGEFEERLKAVLDEIKESAGQVITFIDELHTIVGAGATGESAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV V EPSV DTV ILRGLKE
Sbjct: 297 GNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEEID++
Sbjct: 357 RYEVHHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDSV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE AL+KE D+ASK RL ++R EL D R+KL L R++ EK ID +R +
Sbjct: 417 ERIVRRLEIEEMALQKETDEASKERLEKLRAELADEREKLNQLTTRWQNEKTAIDSVRGI 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQ---LEGNQSDENLMLTETVG 533
K++ E L + AER DL +AA+LRYG I ++E + + G +D ++ML E VG
Sbjct: 477 KEQLEALRGEEERAERDGDLGKAAELRYGRIPQLEKELEKAAAASGAAADGDVMLKEEVG 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
PD +A+VV+ WTGIP R+ + E +R++G EAV AV+++V RSRAG+
Sbjct: 537 PDDVADVVAAWTGIPAGRMMEGETAKLLRMESELGKRVVGQDEAVQAVSDAVRRSRAGVA 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEY E+HSV+RL+GAPPG
Sbjct: 597 DPNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+E GGQLTEAVRRRPYSVVLFDEVEKAH VF+TLLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 657 YVGYESGGQLTEAVRRRPYSVVLFDEVEKAHPDVFDTLLQVLDDGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++I+TSNLGA R+ ++ VR F+PE +NRLD++VVF L+ +QL
Sbjct: 717 ILILTSNLGAGG-------------DREHIMAAVRAAFKPEFINRLDDVVVFHSLTEDQL 763
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++ +Q++ +A RLA R + L V+ +A + YDP YGARP+RR +++ + +L++
Sbjct: 764 EQIVDIQLEQLAGRLAARRLTLDVSSSARFWLAVRGYDPQYGARPLRRLIQQSIGDQLAK 823
Query: 823 MLVREEIDENSTVYIDASPKGDNLV 847
L+ +I + TV + S GD+LV
Sbjct: 824 KLLAGDIKDGDTVSVGVSDDGDHLV 848
>gi|49523813|emb|CAD10780.2| HSP100 protein [Phycomyces blakesleeanus]
gi|57898943|emb|CAI44947.1| putative HSP100 protein [Phycomyces blakesleeanus]
Length = 901
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/860 (52%), Positives = 597/860 (69%), Gaps = 43/860 (5%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSG--IFAQAINNAGGENA 58
M+ FT K + +A A A H P H+A A+ D G +F + AG + +
Sbjct: 1 MSGMNFTEKVEKTLATAQAQAREFSHTLLHPAHIACAMFDDVDGQSLFKSILEKAGADPS 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
ER + + M LP+Q P P EI S K++R A+ K D+++++D LIL L
Sbjct: 61 L--VERGYKKQMVHLPAQDPPPPEISISPQTAKLLRNAEKHMKDQKDSYISIDHLILALA 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+++ K+AGV ++S V+++RG ++V+S + + +++L Y DL E Q G
Sbjct: 119 DETTTFQPMKDAGVTKKALESAVQQVRG--NKRVDSKNAEEVYESLSKYAIDLTEMAQTG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRRV+R+L RRTKNNPVLIGEPGVGKTA+ EGLA+RIV DVP +L
Sbjct: 177 KLDPVIGRDDEIRRVIRVLCRRTKNNPVLIGEPGVGKTAIAEGLARRIVERDVPESL-QC 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L +LDMGAL+AGAKYRGEFEERLKAVLKEV+E+E +ILFIDEIH VLGAG+ EGSMDA
Sbjct: 236 KLFSLDMGALIAGAKYRGEFEERLKAVLKEVKESEEGIILFIDEIHTVLGAGKGEGSMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
ANL KPMLARG+LRCIGATTL EY K +EKD AFERRFQ+V V EPSV T+SILRGLKE
Sbjct: 296 ANLLKPMLARGELRCIGATTLTEY-KVIEKDPAFERRFQKVDVGEPSVAATISILRGLKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE +HGV+I D ALVVAAQLS RYIT R LPDKAIDL+DEA AN RVQLDS+PEEID L
Sbjct: 355 RYESYHGVKITDSALVVAAQLSDRYITTRFLPDKAIDLIDEAGANTRVQLDSKPEEIDVL 414
Query: 417 ERKRMQLEIELHALEKEK-DKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
ERK QLEIE AL KEK +K S+ RL V++E+ ++++L+PL +RY +K R+DEIR
Sbjct: 415 ERKHFQLEIEAMALGKEKNNKDSQERLKVVKEEMAKIQEELKPLKLRYDMDKGRLDEIRD 474
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE----------------G 519
LKQK +EL EA RYDL AAD+ Y AI +VE I L G
Sbjct: 475 LKQKLDELKRKAVEARNRYDLDSAADIEYYAIPDVEQRINALSAEKQRKMAEQMANDTAG 534
Query: 520 NQSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVN 568
S +++E V P+QI EV+SRWTGIPV L ++E+E+L +G A+
Sbjct: 535 QASTTGQLVSEIVRPEQIMEVISRWTGIPVQNLAKSEREKLLHMEAEIGKKVVGQKRAIE 594
Query: 569 AVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYM 628
+V +++ S+AGL P +P SF+FLGPTGVGKT L K LAE LF+DE ++RIDMSE M
Sbjct: 595 SVCDAIRLSKAGLQNPTKPLASFMFLGPTGVGKTLLCKTLAEFLFNDERAMIRIDMSELM 654
Query: 629 EQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGR 688
EQHSV++LIGAPPGYVGHE+GG L EAVRR+PY+VVL DE+EKAH V N LLQVLD+G
Sbjct: 655 EQHSVAKLIGAPPGYVGHEDGG-LFEAVRRKPYAVVLLDELEKAHKDVANVLLQVLDEGF 713
Query: 689 LTDGQGRTVDFRNTVIIMTSNLGAEHLL---SGMMGKVTMQVARDQVLQEVRKHFRPELL 745
+ D +GR +DFRNT+I+MTSNLGA HLL S G + + ++ +LQ VR+HF PE
Sbjct: 714 IHDSKGRKIDFRNTIIVMTSNLGA-HLLAEQSAAGGDPDLIILKESILQIVRQHFSPEFT 772
Query: 746 NRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGA 805
NR+DEIV+F+ L+ + + +++++V RLA+R + L V+ A +++ E Y+P++GA
Sbjct: 773 NRIDEIVIFNRLTETNITNIVDVRLEEVQERLADRKITLDVSKPAKELLGKEGYEPVFGA 832
Query: 806 RPIRRWLEKKVVTELSRMLV 825
RP+ R +++KV+ L+R+++
Sbjct: 833 RPLNRLIQQKVLNPLARLII 852
>gi|331697276|ref|YP_004333515.1| ATP-dependent chaperone ClpB [Pseudonocardia dioxanivorans CB1190]
gi|326951965|gb|AEA25662.1| ATP-dependent chaperone ClpB [Pseudonocardia dioxanivorans CB1190]
Length = 875
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/873 (52%), Positives = 617/873 (70%), Gaps = 35/873 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T + +A++ A ++AT GH + HL +ALL P G+ + + +
Sbjct: 1 MDLNRLTQMSQQALSAAQDVATRRGHPEVDGEHLLLALLDQPEGLVPRLLTAMDADRDTL 60
Query: 61 SAERVFNQAMKKLPSQT-PA--PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
++ + + P T P+ P + + L +V+ AQ D +++V+ L++ L
Sbjct: 61 RSD--LEAELGRKPRTTRPSAQPGQAAVTQRLARVLEAAQREAARLKDEYVSVEHLLVAL 118
Query: 118 LED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ + G L GV + + ++RG + +V SA+ + T++AL YG DLVE
Sbjct: 119 AEEGPGTAAGRLLAAHGVTRDAFLAALTRVRGNQ--RVTSATPEATYEALAKYGIDLVES 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A G+LDPVIGRD EIRRVV+ILSR+TKNNPVLIG+PGVGKTA+VEGLAQR++ GDVP
Sbjct: 177 ARSGRLDPVIGRDTEIRRVVQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRVLNGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMG LVAGAKYRGEFEERL+AVL EV+ AEG+++LF+DE+H V+GAG EG
Sbjct: 237 LRDRTIFALDMGLLVAGAKYRGEFEERLQAVLTEVKAAEGRILLFVDELHNVVGAGAAEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L IGATTL+EYRK +EKDAA ERRFQ VYV EPSV DTVSILR
Sbjct: 297 AMDAGNMLKPMLARGELHMIGATTLDEYRKRLEKDAALERRFQPVYVDEPSVEDTVSILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E+ E HGVRI D AL+ AA LS RY+T R LPDKAIDLVDEA A +R ++DS P E
Sbjct: 357 GLRERLEVFHGVRILDGALIAAATLSDRYLTDRFLPDKAIDLVDEASARLRTEIDSMPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK M+LEIE ALEKE+D AS ARL ++R+EL DLR + ++ E++ I
Sbjct: 417 LDEITRKVMRLEIEEAALEKEEDAASVARLDQLRRELADLRSEADAKRAQWDAERQAIRR 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG------NQSDENL 526
+R L+ + E++ ++EAERRYDL RAA+LR+G + E+E +LE + E+
Sbjct: 477 VRDLRAELEQVRREVEEAERRYDLNRAAELRFGRLGELER---KLEAESRRLVEKQGEHR 533
Query: 527 MLTETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVL 575
+L E V ++IAE+VS WTGIPV+RL + E+E R++G EAV AVA++++
Sbjct: 534 LLREAVTAEEIAEIVSVWTGIPVSRLTEGEREKLLRLDQVLHRRVVGQDEAVQAVADAII 593
Query: 576 RSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSR 635
R+R+G+ P++PTGSF+FLGPTGVGKTELA+ALAE LFD E +VRIDMSEY E+H+VSR
Sbjct: 594 RARSGVKDPRRPTGSFIFLGPTGVGKTELARALAEALFDSEENIVRIDMSEYQERHTVSR 653
Query: 636 LIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGR 695
L+GAPPGYVG+EEGGQLTEAVRRRPY+V+LFDE+EKAH VFNTLLQVLDDGRLTD QG
Sbjct: 654 LVGAPPGYVGYEEGGQLTEAVRRRPYAVILFDEIEKAHADVFNTLLQVLDDGRLTDAQGH 713
Query: 696 TVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVF 754
TVDFRNTVIIMTSN+G+ +LL G+M ++ ARD VL E+R HFRPE LNR+DE V+F
Sbjct: 714 TVDFRNTVIIMTSNIGSPYLLDGVMPDGQLKPEARDLVLAELRGHFRPEFLNRIDETVLF 773
Query: 755 DPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEK 814
PL+ +++ + L + ++ RLAER V L + A ++ + YDP+YGARP+RR + +
Sbjct: 774 TPLNLDEIEDIVELMLAELRARLAERHVTLEIDAGARHLIAQQGYDPVYGARPLRRLIAR 833
Query: 815 KVVTELSRMLVREEIDENSTVYIDASPKGDNLV 847
+V T ++RML+RE E +T+ ++ +GD LV
Sbjct: 834 EVETRIARMLIREGAIEGATLRVER--EGDQLV 864
>gi|417555953|ref|ZP_12207015.1| ATP-dependent chaperone protein ClpB [Gardnerella vaginalis 315-A]
gi|333603276|gb|EGL14694.1| ATP-dependent chaperone protein ClpB [Gardnerella vaginalis 315-A]
Length = 864
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/867 (51%), Positives = 610/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + A +AG+AQ LHLA ALL G+ I AG + AE
Sbjct: 4 KFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIGAE- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-- 121
A+ LPS T + P AS L+ + +A+ + GD +++ + +++G++ +
Sbjct: 63 -IRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMRTMGDEYVSTEHMLIGIVASAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 122 AVADIFKKHNVSADALRKAVPTVRG--GAKVTSPDAEGNYKALEKYSVDMTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVLKE+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 240 SLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EYR+++EKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 300 LKPMLARGELRLVGATTLNEYREHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A++ RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDAAARERLEKLQEELANSREKLTGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E ++ E + PDQ
Sbjct: 480 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESEAANAKSEAKEPMVPDQVDA 539
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 540 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 600 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 660 IGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PLS E+L
Sbjct: 720 LIMTSNLGSQFLVQEGLDDAA---KRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELG 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ VA RL++R ++L V+D+A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 777 GIVYIQVRQVAARLSDRRISLDVSDSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 836
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + V D D++ ++
Sbjct: 837 LLSGKVHDGARVVADCENTSDHVTLKI 863
>gi|296167815|ref|ZP_06850001.1| chaperone protein ClpB [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897045|gb|EFG76665.1| chaperone protein ClpB [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 848
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/865 (52%), Positives = 599/865 (69%), Gaps = 40/865 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
NP T KT A+ A + A++AG+ + P HL +ALL+ GI + G A
Sbjct: 4 FNP---TTKTQAALTSALQAASAAGNPEIRPAHLLMALLTQADGIAGPLLEAVGVAPATI 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
AER+ Q LP + A + S + I AQ D +++ + +++GL
Sbjct: 61 RAEAERLVAQ----LPQASGASSQPQLSRESLAAITTAQQLATEMDDEYVSTEHVMVGLA 116
Query: 119 E-DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
DS + L G + ++ K+RG +V S + T+QAL+ Y DL +A
Sbjct: 117 TGDSDVAKLLTGHGASPQALREAFVKVRGSA--RVTSPEPEATYQALEKYSTDLTARARE 174
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D
Sbjct: 175 GKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRD 234
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSM 294
+I+LD+G++VAGAKYRGEFEERLKAVL +++ + G++I FIDE+H ++GAG T EG+M
Sbjct: 235 KTVISLDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAM 294
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV V EPSV DTV ILRGL
Sbjct: 295 DAGNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGL 354
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
K++YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +++++DS+P EID
Sbjct: 355 KDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLKMEIDSRPVEID 414
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ER +LEIE AL KE+D+ASK RL ++R EL D ++KL L R++ EK ID +R
Sbjct: 415 EVERLVRRLEIEEMALAKEEDEASKERLEKLRSELADQKEKLAELTTRWQNEKSAIDVVR 474
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLEGNQSDENLMLTETVG 533
LK++ E L + AER DLA+AA+LRYG I EVE + L ++ EN+ML E VG
Sbjct: 475 ELKEQLEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPHAEARENVMLKEEVG 534
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
PD IAEVVS WTGIP R+ + E +R+IG AV AV+++V RSRAG+
Sbjct: 535 PDDIAEVVSAWTGIPAGRMLEGETAKLLRMEDELGKRVIGQKRAVTAVSDAVRRSRAGVA 594
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +PTGSF+FLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RL+GAPPG
Sbjct: 595 DPNRPTGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPG 654
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
Y+G+++GGQLTEAVRRRPY+V+LFDE+EKAH VF+ LLQVLD+GRLTDGQGRTVDFRNT
Sbjct: 655 YIGYDQGGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNT 714
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++I+TSNLG+ + +QV+ VR F+PE +NRLD++++F L +L
Sbjct: 715 ILILTSNLGSGG-------------SEEQVMAAVRSAFKPEFINRLDDVIIFHGLEPGEL 761
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ + RLA+R + L V+ A + +DP+YGARP+RR +++ + +L++
Sbjct: 762 VSIVDIQLAQLQKRLAQRRLTLEVSLPAKQWLAQRGFDPVYGARPLRRLVQQAIGDQLAK 821
Query: 823 MLVREEIDENSTVYIDASPKGDNLV 847
L+ ++ + TV ++ SP GD+L+
Sbjct: 822 QLLAGDVHDGDTVPVNVSPDGDSLI 846
>gi|455643273|gb|EMF22401.1| protein disaggregation chaperone [Citrobacter freundii GTC 09479]
Length = 857
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/854 (51%), Positives = 591/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S L++V+ + GD ++ + +L +LE
Sbjct: 60 -LRTTIDQALSRLPQVEGTGGDVQPSQELVRVLNLCDKLAQKRGDNFISSELFVLAVLES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ +D VL V +FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGHMKDMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ T+ ++ +
Sbjct: 836 GELIPGKTIRLEVN 849
>gi|414342706|ref|YP_006984227.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Gluconobacter
oxydans H24]
gi|411028041|gb|AFW01296.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Gluconobacter
oxydans H24]
Length = 866
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/861 (51%), Positives = 605/861 (70%), Gaps = 24/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE-NAA 59
M+ KFT ++ + A +A H Q TP HL ALL D G + I AGG+
Sbjct: 1 MDIQKFTERSQGFLQAAQTIALRDYHQQLTPEHLLKALLDDEQGAASGLIRAAGGDPKVV 60
Query: 60 QSAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q+A + A+ KLP Q + A+ ++++ A+AA K GD+H+A D+L++ +
Sbjct: 61 QAAN---DAALAKLPKVQGGGAGQPQATPDFVRLLDTAEAAAKNAGDSHVAQDRLLVAIA 117
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQA 175
+S G E + ++ V ++R +GR V SAS + TF ALK Y RD+ V QA
Sbjct: 118 ASNSPAGKALVEGKADASALERAVAQIR--KGRTVTSASAENTFDALKKYARDVTAVAQA 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++L+RR+KNNPVLIGEPGVGKTA+VEGLA RIV GDVP L +
Sbjct: 176 GKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEALRN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LDMGAL+AGAK+RGEFEERLKAVLKEVE AEG++ILFIDE+H ++GAGR++G+MD
Sbjct: 236 KKLMSLDMGALIAGAKFRGEFEERLKAVLKEVETAEGEIILFIDEMHTLVGAGRSDGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG L CIGATTL+EYRKY+EKDAA RRFQ V+V EPSV DT+SILRG+K
Sbjct: 296 ASNLIKPELARGTLHCIGATTLDEYRKYIEKDAALARRFQPVFVGEPSVADTISILRGIK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PE +D
Sbjct: 356 EKYELHHGVRITDNAIVSAATLSNRYITDRFLPDKAIDLIDEAASRLRMQIDSKPEALDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE A+ KE D ASK RL + EL DL ++ + + EK+R++ I++
Sbjct: 416 LDRRIIQLKIEREAIRKEDDTASKDRLQALEAELADLEEQSDAMGAEWHAEKDRVNAIQK 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI--GQLEGNQSDENLMLTETVG 533
LK++ + + A+R+ +LA+A++L YG I +EA I Q E + + ++ + ++V
Sbjct: 476 LKEQLDTARSDVDVAQRQGNLAKASELMYGLIPNLEAQIAKAQEEEDAASKSGLFADSVT 535
Query: 534 PDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLG 582
IA VVSRWTGIPV R+ + E ++R++G +A+ AV+ +V R+RAGL
Sbjct: 536 EQGIASVVSRWTGIPVDRMLEGERAKLMRMEDTLRDRVVGQEQALVAVSNAVRRARAGLQ 595
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTEL KALA+ LFDDE L+RIDMSE+ME+H+VSRLIGAPPG
Sbjct: 596 DPNRPIGSFLFLGPTGVGKTELTKALAQFLFDDEKALLRIDMSEFMEKHAVSRLIGAPPG 655
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGG LTEAVRRRPY V+LFDEVEKAH +FN LLQVLDDGRLTDGQGR VDFRNT
Sbjct: 656 YVGYDEGGVLTEAVRRRPYQVILFDEVEKAHEDIFNILLQVLDDGRLTDGQGRVVDFRNT 715
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+I++TSNLG++ L + G+ + + + QV+Q VR HFRPE LNRLDEI++F L +
Sbjct: 716 IIVLTSNLGSDVLANQEDGE-SPDLVQAQVMQVVRNHFRPEFLNRLDEIILFSRLQRADM 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++ +Q+ + L +R + L + + + + YDP+YGARP++R +++ + L+
Sbjct: 775 GRIVDIQLSRLRQLLEDRKITLELDEKGREWLAEAGYDPVYGARPLKRVIQRSLQNPLAG 834
Query: 823 MLVREEIDENSTVYIDASPKG 843
+L+ I + T+++ A KG
Sbjct: 835 LLLDGTIRDGDTIHVSAGDKG 855
>gi|354594700|ref|ZP_09012737.1| chaperone protein ClpB [Commensalibacter intestini A911]
gi|353671539|gb|EHD13241.1| chaperone protein ClpB [Commensalibacter intestini A911]
Length = 868
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/868 (51%), Positives = 608/868 (70%), Gaps = 37/868 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT ++ + A +A H Q TP HL ALL D G A I AGG+
Sbjct: 1 MDIEKFTDRSKGFLQAAQTIAIREFHQQLTPQHLLKALLDDEEGAAASLIRAAGGD---- 56
Query: 61 SAERVFNQAMKKLPSQTP-----APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
++ A++ + + P + A+ LI+++ A+ GDT++A D+L+L
Sbjct: 57 --PKIIQGAVEHVLASVPKVQGGGAGQPQATPELIRILDNAEQEASKAGDTYVAQDRLLL 114
Query: 116 GLL-EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
L D+ G ++ GV+ + ++ +R +GRKV+SA+ + +F ALK Y RD+ E
Sbjct: 115 ALAASDTPAGYAMQKNGVSAQNLSHAIDAIR--KGRKVDSANAEASFDALKKYARDMTEI 172
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A GKLDPVIGRDEEIRR V++L+RRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP
Sbjct: 173 ARQGKLDPVIGRDEEIRRAVQVLARRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEA 232
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L + +L+ALD+GALVAGAK+RGEFEERLKAVLKEVE A GKVILFIDE+H ++GAGR +G
Sbjct: 233 LKNKQLLALDLGALVAGAKFRGEFEERLKAVLKEVETAAGKVILFIDEMHTIVGAGRADG 292
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA+NL KP LARG L CIGATTL+EYRKY+EKDAA RRFQ V+V EPSV DT+SILR
Sbjct: 293 AMDASNLIKPELARGTLHCIGATTLDEYRKYIEKDAALARRFQPVFVGEPSVADTISILR 352
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
G+ EKYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PE
Sbjct: 353 GIAEKYELHHGVRIADTALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMQIDSKPEA 412
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D L+R+ +QL+IE AL++E+D ASK RL + E+ L +K + + EKE+++
Sbjct: 413 LDELDRRLIQLKIEREALKREEDSASKERLATLESEIASLEEKSDAMTAAWHAEKEQVNA 472
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN------L 526
+++L+++ ++ ++ A+R+ +LA+A+ L YG I +++ Q+E QS N
Sbjct: 473 VQKLQEQLDQARSEVEVAQRQGNLAKASQLMYGTIPDLQK---QIEDTQSKNNEHPESGQ 529
Query: 527 MLTETVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVL 575
++++ V +IA VVSRWTGIPV ++ + E +ER+IG A+ AV+ +V
Sbjct: 530 LVSQAVTDHEIAGVVSRWTGIPVDKMLEGERAKLLRMEDELRERVIGQEAALKAVSNAVR 589
Query: 576 RSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSR 635
R+RAGL P +P GSFLFLGPTGVGKTEL KALA+ LFDDE L+R+DMSE+ME+H+VSR
Sbjct: 590 RARAGLQDPNRPIGSFLFLGPTGVGKTELTKALADFLFDDEKALLRVDMSEFMEKHAVSR 649
Query: 636 LIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGR 695
LIGAPPGYVG+EEGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGR
Sbjct: 650 LIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQGR 709
Query: 696 TVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFD 755
TVDFRNT+II+TSNLG++ L + G+ + ++ +V++ VR HFRPE LNRLDEI++F
Sbjct: 710 TVDFRNTMIILTSNLGSDVLANQPDGE-SSEMVEAEVMKVVRSHFRPEFLNRLDEIILFS 768
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
L + K+ +Q+ + LA+R + L + + A + + YDP+YGARP++R +++
Sbjct: 769 RLQKADMAKIVDIQLGRLQSLLADRKIKLDLDEKAHNWLEEAGYDPVYGARPLKRVIQRN 828
Query: 816 VVTELSRMLVREEIDENSTVYIDASPKG 843
+ +L+ ++++ + + + + A+ KG
Sbjct: 829 LQNQLAELVLQGNVYDGEDIPVSANDKG 856
>gi|336400007|ref|ZP_08580795.1| chaperone ClpB [Fusobacterium sp. 21_1A]
gi|423137961|ref|ZP_17125604.1| chaperone ClpB [Fusobacterium nucleatum subsp. animalis F0419]
gi|336163204|gb|EGN66136.1| chaperone ClpB [Fusobacterium sp. 21_1A]
gi|371958911|gb|EHO76612.1| chaperone ClpB [Fusobacterium nucleatum subsp. animalis F0419]
Length = 858
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/860 (49%), Positives = 604/860 (70%), Gaps = 36/860 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
MNP++FT T AI +A +++ P LA+ LL +G+ + I G +
Sbjct: 2 MNPNQFTENTISAINLAVDISKGNMQQSIRPEALALGLLMQNNGLIPRVIEKMGLNLQYI 61
Query: 59 AQSAERVFNQAMK---KLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
E+ N K K+ ++ + D+ S ++ RA+ GD+ L+V+ +
Sbjct: 62 ISELEKEMNNYPKVEVKVSNENISLDQKTNS-----ILNRAEKIMNEMGDSFLSVEHIFK 116
Query: 116 GLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++E+ I FK G+ + + + +RG RKV++ + + T++ L+ Y +DLVE A
Sbjct: 117 AMIEEMPI---FKRLGINLEKYMEVLMNIRG--NRKVDNQNPEATYEVLEKYAKDLVELA 171
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GK+DP+IGRD EIRR ++I+SRRTKN+P+LIGEPGVGKTA+VEGLAQRI+ GDVP +L
Sbjct: 172 REGKIDPIIGRDSEIRRAIQIISRRTKNDPILIGEPGVGKTAIVEGLAQRILNGDVPESL 231
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ ++ +LDMGALVAGAKY+GEFEER+K VLKEVEE+ G +ILFIDEIH ++GAG+ EGS
Sbjct: 232 KNKKIFSLDMGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGS 291
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
+DA N+ KPMLARG+LR IGATT++EYRKY+EKD A ERRFQ + V EP++ DT+SILRG
Sbjct: 292 LDAGNMLKPMLARGELRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNIDDTISILRG 351
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LK+K+E +HGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +R ++DS PEE+
Sbjct: 352 LKDKFETYHGVRIADAAIVEAAVLSQRYITDRKLPDKAIDLIDEAAAMIRTEIDSMPEEL 411
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L RK +QLEIE+ AL+KE D ASK RL + KEL DL ++ + L +++ EKE I +I
Sbjct: 412 DQLTRKALQLEIEIKALQKETDDASKERLKVIEKELADLNEEKKVLTSKWELEKEDISKI 471
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLT 529
+ +K++ E + +++AER YDL + ++L+YG + +E + Q + N+ D ++ +L
Sbjct: 472 KNIKREIENVKLEMEKAEREYDLTKLSELKYGKLATLEKEL-QEQQNKIDKDGKDDSLLK 530
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSR 578
+ V D+IA++VSRWTGIPV++L + +KE+++ G EAV AVA+++LRS
Sbjct: 531 QEVTADEIADIVSRWTGIPVSKLTETKKEKMLHLEDHIKERVKGQDEAVKAVADTMLRSV 590
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P GSF+FLGPTGVGKT LAK LA LFD E+ +VRIDMSEYM++ SV+RLIG
Sbjct: 591 AGLKDPNRPMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDSVVRIDMSEYMDKFSVTRLIG 650
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEA+R +PYSV+LFDE+EKAH VFN LLQVLDDGRLTDGQGR VD
Sbjct: 651 APPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVD 710
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F+NT+IIMTSN+G+ HL+ + + R++V E++ F+PE LNR+DEI+ F L
Sbjct: 711 FKNTLIIMTSNIGS-HLI--LEDPALSESTREKVTDELKARFKPEFLNRVDEIITFKALD 767
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++++ +L +KD+ +L + + L +D +D + +YDP YGARP+RR+++K++ T
Sbjct: 768 LPAIKEIVKLSLKDLENKLKSKHITLEFSDKMIDYLANNAYDPHYGARPLRRYIQKEIET 827
Query: 819 ELSRMLVREEIDENSTVYID 838
L++ ++ EI E S V ID
Sbjct: 828 SLAKKILANEIHEKSDVLID 847
>gi|317054813|ref|YP_004103280.1| ATP-dependent chaperone ClpB [Ruminococcus albus 7]
gi|315447082|gb|ADU20646.1| ATP-dependent chaperone ClpB [Ruminococcus albus 7]
Length = 874
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/863 (50%), Positives = 609/863 (70%), Gaps = 31/863 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE-NAA 59
MN KFT K+ +A+ A +A + HL AL D +G+ Q + + NA
Sbjct: 1 MNMQKFTEKSVQAVQDAQNIAARQSNQAIGQEHLLSALCLDDNGLIPQLLTQMSTDINAF 60
Query: 60 QSAERVFNQAMKKLPSQTP---APDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILG 116
+ A ++A+ K+P T A +I S+ L + + A+A K GD ++V+ + LG
Sbjct: 61 RGA---LDRAVDKIPKVTVGGRAQGQIYISSELDRALAEAEAQAKQMGDEFVSVEHIFLG 117
Query: 117 LLE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
++E +S++ ++ + G+ + ++++RG KV S + + T+ LK YG++LV
Sbjct: 118 IMECANSEVAEVLRTFGINKTGFLAALKQVRG--SAKVTSQNPEETYDVLKKYGQELVGL 175
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A KLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTAV EGLAQRIV GDVP +
Sbjct: 176 ARQNKLDPVIGRDSEIRNVIRILSRKTKNNPVLIGEPGVGKTAVAEGLAQRIVSGDVPDS 235
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D ++ +LDMG+L+AGAK+RGEFEER KAV+ E++++EGK+ILFIDE+H ++GAG+++G
Sbjct: 236 LKDRQIFSLDMGSLIAGAKFRGEFEERFKAVVSEIKKSEGKIILFIDELHTIVGAGKSDG 295
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATTL EYR+Y+EKD A ERRFQ V V EPSV DT+SILR
Sbjct: 296 AMDAGNLLKPMLARGELHCIGATTLNEYRQYIEKDKALERRFQPVMVDEPSVEDTISILR 355
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
G+KE+YE HGV+IQD+AL+ AA LS RY+T R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 356 GIKERYEVFHGVKIQDQALITAAVLSDRYLTDRFLPDKAIDLVDEACALIRTEMDSMPTE 415
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D+L RK +Q EIE L+KE DK ++ L EV+KEL D+R + + +++ EK I +
Sbjct: 416 LDDLRRKILQHEIEETVLKKESDKLAEEHLAEVQKELADMRAQYDEMRAKWENEKNAISK 475
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVE---AAIGQLEGNQSDENLMLT 529
+++++++ + + +++AER YDL++ A+L+YG ++ ++ A + S N +L
Sbjct: 476 VQKIREEIDAVNGEIKQAERDYDLSKLAELKYGKLENLQKELAEEEKKAEQSSKSNTLLR 535
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSR 578
+ V D+IA ++ RWTGIPV +L + E+ ER+IG EAV V+E++LRSR
Sbjct: 536 DKVTDDEIARIICRWTGIPVAKLMEGERDKLLRLESILHERVIGQNEAVEKVSEAILRSR 595
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P P GSFLFLGPTGVGKTELAK LA+ LFDDEN +VRIDMSEYME+ SV+RLIG
Sbjct: 596 AGIANPNTPIGSFLFLGPTGVGKTELAKTLAQALFDDENNIVRIDMSEYMEKFSVTRLIG 655
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DEVEKAH VFN LLQVLDDGR+TD QGRTVD
Sbjct: 656 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVLDDGRVTDSQGRTVD 715
Query: 699 FRNTVIIMTSNLGAEHLLSGM---MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFD 755
F+NTVII+TSNLG+ +L G+ G ++ + ARD V ++ HFRPE LNRLDEIV++
Sbjct: 716 FKNTVIILTSNLGSHFILEGIDEETGDISEE-ARDNVNDLLKTHFRPEFLNRLDEIVMYK 774
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PL ++ + L +K + RLAE+ + + +T++A ++ + Y+ +GARP+RR+++
Sbjct: 775 PLLKSEIYSICGLMLKSLEKRLAEKRLKMELTESAKAAIVDQGYNMAFGARPLRRFIQSH 834
Query: 816 VVTELSRMLVREEIDENSTVYID 838
V T L++ ++R++ +S + +D
Sbjct: 835 VETLLAKAIIRDDPAADSLMKVD 857
>gi|384431672|ref|YP_005641032.1| ATP-dependent chaperone ClpB [Thermus thermophilus SG0.5JP17-16]
gi|333967140|gb|AEG33905.1| ATP-dependent chaperone ClpB [Thermus thermophilus SG0.5JP17-16]
Length = 854
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/866 (52%), Positives = 609/866 (70%), Gaps = 34/866 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MN +++T EA+A A LA H HL LL D + + + AG + A
Sbjct: 1 MNLERWTQAAREALAQAQVLAQRMKHQAIDLPHLWAVLLKDEGSLAWRLLEKAGADPKAL 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
++ ER + +LP A + L + RA+A + D ++AVD L+L L
Sbjct: 61 KEAQER----ELARLPKVEGAEVGQYLTRRLSGALNRAEALMEELKDRYVAVDTLVLALS 116
Query: 119 EDSQIGDLFKEAGV-AVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
E + G+ + +K +++LRG G+ V++ ++T+ AL+ YG DL + A
Sbjct: 117 EAT--------PGLPGLETLKKALQELRG--GKTVQTEHAESTYNALEQYGIDLTKLAAE 166
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRRV++IL RRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L
Sbjct: 167 GKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKG 226
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
R+I+L MG+L+AGAKYRGEFEERLKAV++EV +++G+VILFIDE+H V+GAG+ EG++D
Sbjct: 227 KRIISLQMGSLLAGAKYRGEFEERLKAVIQEVIQSQGEVILFIDELHTVVGAGKAEGAVD 286
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KP LARG+LR IGATTL+EYR+ +EKD A ERRFQ VYV EP+V +T+SILRGLK
Sbjct: 287 AGNMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTVEETISILRGLK 345
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D A++ AA LS RYIT R LPDKAIDL+DEA A +R+ L+S PEEID
Sbjct: 346 EKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDA 405
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
LERK++QLEIE AL+KEKD S+ RL + E+ L +K+ L ++KE+E + ++R
Sbjct: 406 LERKKLQLEIEREALKKEKDPDSQERLKAIEAEIQKLSEKIAKLRAEWEKEREILRKLRE 465
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
+ + +E+ ++ AER+YDL RAA+LRYG + ++EA + L + E D
Sbjct: 466 AQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEED 525
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
IAE+VSRWTGIPV++L + E+ +R++G EA+ AVA+++ R+RAGL P
Sbjct: 526 -IAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIKAVADAIRRARAGLKDP 584
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSFLFLGPTGVGKTELAK LA LFD E ++RIDM+EYME+H+VSRLIGAPPGYV
Sbjct: 585 NRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYV 644
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTD GRTVDFRNTVI
Sbjct: 645 GYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVI 704
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSNLG+ +L G+ + RD+V + +++HFRPE LNRLDEIVVF PL+ EQ+R+
Sbjct: 705 ILTSNLGSPLILEGIQKGWPYERIRDEVFRVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQ 764
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+ + RL+E+ +AL +T+AA D + YDP++GARP++R +++++ T L++ +
Sbjct: 765 IVEIQLGYLRERLSEKRIALELTEAAKDFLAERGYDPVFGARPLKRVIQRELETPLAQKI 824
Query: 825 VREEIDENSTVYIDASPKGDNLVYRV 850
+ E+ E V +D P G LV+ V
Sbjct: 825 LAGEVKEGDRVQVDVGPAG--LVFTV 848
>gi|83950866|ref|ZP_00959599.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Roseovarius
nubinhibens ISM]
gi|83838765|gb|EAP78061.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Roseovarius
nubinhibens ISM]
Length = 872
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/857 (51%), Positives = 598/857 (69%), Gaps = 20/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT ++ + A +A H + P H+ AL+ D G+ + I AGGE A
Sbjct: 1 MDFEKFTERSRGFVQAAQTIAMRESHQKLAPEHILKALMDDDQGLASNLIKRAGGEPA-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-LE 119
+ + A+ K+P T + KV+ A+ K GD+ + V++++ L +
Sbjct: 59 RVVQALDIAISKIPVVTGDAGQTYMDQQTGKVLAEAEKLAKKAGDSFVPVERILTALAMV 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
S + + G++ ++ + +R +GR +SAS + T++AL+ Y RDL A GK
Sbjct: 119 KSPAKEALEAGGISAQKLNEAINDVR--KGRTADSASAEDTYEALEKYARDLTRAADEGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DP+IGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +LAD R
Sbjct: 177 IDPIIGRDDEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLADKR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L++LDMGAL+AGAKYRGEFEERLK+VL EV +A G++ILFIDE+H ++GAG+++G+MDAA
Sbjct: 237 LLSLDMGALIAGAKYRGEFEERLKSVLNEVTDAAGEIILFIDEMHTLIGAGKSDGAMDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ + V EP+V DT+SILRG+KEK
Sbjct: 297 NLIKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPIVVQEPTVEDTISILRGIKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+++DS+PEE+D L+
Sbjct: 357 YELHHGVRISDSALVTAATLSHRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEELDALD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +Q +IE AL+KE D ASK RL ++ KEL DL+++ + + +++ E++++ R LK
Sbjct: 417 REILQKQIEAEALKKEDDVASKDRLEKLEKELSDLQERSREMTAQWQAERDKLAGARDLK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
++ + L A+R DLA+A +L YG I +E + Q E ++D +M+ E V P+QI
Sbjct: 477 EQLDRARIELDHAKREGDLAKAGELSYGVIPGLEKQLAQAESAEAD-GVMVEEAVRPEQI 535
Query: 538 AEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLGRPQQ 586
A+VV RWTGIP ++ + E+E+L+G+ E AV AVA +V R+RAGL +
Sbjct: 536 AQVVERWTGIPTAKMLEGEREKLLGMEENLHRRVIGQNQAVKAVANAVRRARAGLNDENR 595
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KA+AE LFDD++ +VRIDMSE+ME+HSV+RLIGAPPGYVG+
Sbjct: 596 PLGSFLFLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHSVARLIGAPPGYVGY 655
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
+EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDG LTDGQGRTVDF+ T+II+
Sbjct: 656 DEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIIL 715
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLGA+ L G RD V+ VR HFRPE LNRLDE ++FD L E + +
Sbjct: 716 TSNLGAQALSQLPDGADASDAKRD-VMDAVRAHFRPEFLNRLDETIIFDRLKREDMAGIV 774
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+QM + RLA R + L + DAA + E YDP++GARP++R +++ + L+ L+
Sbjct: 775 TIQMGRLLKRLAARKITLDLDDAARKWLADEGYDPVFGARPLKRVIQRALQDPLAEALLA 834
Query: 827 EEIDENSTVYIDASPKG 843
+I + STV + A +G
Sbjct: 835 GDILDGSTVPVSAGTEG 851
>gi|404424640|ref|ZP_11006201.1| chaperone ClpB [Mycobacterium fortuitum subsp. fortuitum DSM 46621]
gi|403650808|gb|EJZ06006.1| chaperone ClpB [Mycobacterium fortuitum subsp. fortuitum DSM 46621]
Length = 848
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/865 (52%), Positives = 600/865 (69%), Gaps = 40/865 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
NP T KT A+ A + A+SAG+ + P HL +ALL+ GI A + G + A
Sbjct: 4 FNP---TTKTQAALTSALQAASSAGNPEIRPAHLLMALLTQNEGIAAPLLEAVGVDPATI 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A+R+ +Q LPS + A + S + I AQ D +++ + L++GL
Sbjct: 61 RAGAQRLLDQ----LPSASGASSQPQLSRESLAAITTAQNLATEMDDEYVSTEHLMVGLA 116
Query: 119 E-DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
DS++ L G + ++ K+RG +V S + ++QAL+ Y DL +A
Sbjct: 117 TGDSEVAKLLTGHGASPEALREAFTKVRGSA--RVTSPDPEGSYQALEKYSTDLTARARE 174
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D
Sbjct: 175 GKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRD 234
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSM 294
+I+LD+G++VAGAKYRGEFEERLKAVL E++++ G+VI FIDE+H ++GAG T E +M
Sbjct: 235 KTVISLDLGSMVAGAKYRGEFEERLKAVLDEIKDSAGQVITFIDELHTIVGAGATGESAM 294
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV V EPSV DTV ILRGL
Sbjct: 295 DAGNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGL 354
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
K++YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+P EID
Sbjct: 355 KDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEID 414
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ER +LEIE ALEKE+D ASK RL ++R EL D ++KL L R++ EK ID +R
Sbjct: 415 EVERLVRRLEIEEMALEKEEDDASKERLEKLRGELADYKEKLSELTTRWQNEKGAIDVVR 474
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLEGNQSDENLMLTETVG 533
LK++ + L AER DLA+AA+LRYG I EVE + L ++ EN+ML E VG
Sbjct: 475 ELKEQLDSLRGEADRAERDGDLAKAAELRYGRIPEVEKKLDAALPVAEARENVMLKEEVG 534
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
PD IAEVV WTGIP R+ + E +R+IG AV AV+++V R+RAG+
Sbjct: 535 PDDIAEVVEAWTGIPAGRMLEGESAKLLRMEEELGKRVIGQRAAVTAVSDAVRRTRAGVA 594
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +PTGSF+FLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RL+GAPPG
Sbjct: 595 DPNRPTGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPG 654
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
Y+G+++GGQLTEAVRRRPY+VVLFDE+EKAH VF+ LLQVLD+GRLTDGQGRTVDFRNT
Sbjct: 655 YIGYDQGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNT 714
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++I+TSNLGA +QV+ VR F+PE +NRLD++++F L +L
Sbjct: 715 ILILTSNLGAGG-------------TEEQVMAAVRAAFKPEFINRLDDVIIFHGLEPGEL 761
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q++ + RL++R + L V+ A + +DP+YGARP+RR +++ + +L++
Sbjct: 762 VSIVDIQLQQLQKRLSQRRLTLEVSLPAKQWLAQRGFDPLYGARPLRRLVQQAIGDQLAK 821
Query: 823 MLVREEIDENSTVYIDASPKGDNLV 847
ML+ E+ + V ++ S G+ LV
Sbjct: 822 MLLAGEVHDGDVVPVNVSADGEGLV 846
>gi|421846352|ref|ZP_16279501.1| protein disaggregation chaperone [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|411772505|gb|EKS56120.1| protein disaggregation chaperone [Citrobacter freundii ATCC 8090 =
MTCC 1658]
Length = 857
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/854 (51%), Positives = 591/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S L++V+ + GD ++ + +L +LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSQELVRVLNLCDKLAQKRGDNFISSELFVLAVLES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ +D VL V +FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGHMKDMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ T+ ++ +
Sbjct: 836 GELIPGKTIRLEVN 849
>gi|148265968|ref|YP_001232674.1| ATPase [Geobacter uraniireducens Rf4]
gi|146399468|gb|ABQ28101.1| ATPase AAA-2 domain protein [Geobacter uraniireducens Rf4]
Length = 864
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/867 (51%), Positives = 610/867 (70%), Gaps = 24/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+ PDK T KT EA+A+A E A G++ P HL +ALL + G AI G NA
Sbjct: 2 IRPDKMTIKTQEALALAQETAAQRGNSSIEPEHLLLALL-EQEGSLVAAILQKLGANAGF 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
+ +A++KLP + A +I S L +++ AQ D ++ + L+L ++
Sbjct: 61 VKNKAM-EALEKLPRASGATMQIYLSPALNQLLDAAQKEADTMKDAFVSSEHLLLAMIAA 119
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ S + E+GV+ V + ++ +RG+E + + + +QAL Y RDL + A G
Sbjct: 120 KGSAAARILMESGVSREGVLAALKDVRGEE--PITDQNPEDKYQALAKYARDLTDLARRG 177
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRI+ GDVP L +
Sbjct: 178 KLDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIISGDVPETLKEK 237
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFE+RLKAV+KEVE++EGK+ILFIDE+H ++GAG EG+MDA
Sbjct: 238 KLVALDMGALIAGAKYRGEFEDRLKAVIKEVEKSEGKIILFIDELHTLVGAGAAEGAMDA 297
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+N+ KP LARG+L CIGATTL EYRKY+EKDAA ERRFQQVY EPSV DT++ILRGLKE
Sbjct: 298 SNMLKPALARGELHCIGATTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIAILRGLKE 357
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HG+RI+D A++ AA LS RYIT R LPDKAIDL+DEA + +R+++DS P EID +
Sbjct: 358 KYENFHGIRIKDSAIIAAATLSDRYITDRFLPDKAIDLIDEAASRLRIEIDSMPTEIDEV 417
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ERK +QLEIE AL +E+D ++ RL ++ EL++L+ + L +++EK + I L
Sbjct: 418 ERKIIQLEIEKQALLREQDPHAQERLKKLSDELEELKGQSATLKTHWQQEKTILTAISDL 477
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLTETVG 533
++ EE +++ER +LA+ A+LRYG I +E I + + + +E ML E V
Sbjct: 478 NKRLEEKKEEAKKSEREGNLAKTAELRYGEIPAIEKEIAEKKEELTRRQEEGKMLPEEVD 537
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESVLRSRAGLG 582
D +AE+V++WTGIPV+R+ + E E+L+ + E A+ VA +V R+R+GL
Sbjct: 538 GDMVAEIVAKWTGIPVSRMLETESEKLVRMEERLKSRVVGQDDALTLVANAVRRARSGLS 597
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSF+FLGPTGVGKTE A+ALA LFDD+ +VRIDMSEY E+H+V+RLIGAPPG
Sbjct: 598 DPNRPIGSFIFLGPTGVGKTETARALAAFLFDDDQSIVRIDMSEYQEKHTVARLIGAPPG 657
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRRRPYS+VLFDE+EKAH VFN LLQVLDDGRLTDG GRTVDFRNT
Sbjct: 658 YVGYEEGGQLTEAVRRRPYSIVLFDEIEKAHPEVFNVLLQVLDDGRLTDGHGRTVDFRNT 717
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
VIIMTSNLG++ + G R V++ ++++F+PE LNRLDEIV++ L +Q+
Sbjct: 718 VIIMTSNLGSQWI--QQYGVSDYARMRTMVMETLKENFKPEFLNRLDEIVIYHALPLDQI 775
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ + +Q+K + RLAER + L +TD A + + E YDP YGARP++R L+KK+ L+
Sbjct: 776 KHIVAIQIKALQDRLAERHLTLEITDKAREFLAHEGYDPAYGARPLKRTLQKKIQDPLAL 835
Query: 823 MLVREEIDENSTVYIDASPKGDNLVYR 849
ML++ + +E V +D + GD+LV +
Sbjct: 836 MLLQGKFEEGDIVQVDLAMTGDSLVIK 862
>gi|424872521|ref|ZP_18296183.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393168222|gb|EJC68269.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 866
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/852 (52%), Positives = 592/852 (69%), Gaps = 20/852 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ + I A A + GH QFTP H+ LL D G+ A I AGG+ A+
Sbjct: 1 MNIEKYSERVRGFIQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGGD--AK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+A + A+ KLP + I + L KV+ A+ A K GD+ + V++L+ L +
Sbjct: 59 AARLANDAALAKLPKISGGNGNIYLAQPLAKVLSTAEEAAKKAGDSFVTVERLLQALAIE 118
Query: 121 SQIGDL--FKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
S K AGV + + +R +GR +S++ + F +LK + RDL +A G
Sbjct: 119 SSASTFSTLKNAGVTAQGLNQVINDIR--KGRTADSSNAEQGFDSLKKFARDLTAEARDG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ G++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 KLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVVVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYIT R LPDKAIDL+DEA A +R+Q+DS+PEE+D L
Sbjct: 357 KYEQHHKVRIADAALVAAATLSNRYITDRFLPDKAIDLMDEAAARLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+KE D AS RL + E+ DL ++ L R++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKKETDVASADRLRRLETEVTDLEEQADALTARWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ ++ L A+R+ + RA +L YG I ++E + E D M+ E V PD
Sbjct: 477 KKQLDDARNELAIAQRKGEFQRAGELTYGVIPDLEKQLVDAEKQDGDRGAMVQEVVIPDN 536
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA VVSRWTGIPV R+ + E+++L IG +AV AV+ +V R+RAGL P
Sbjct: 537 IAHVVSRWTGIPVDRMLEGERDKLLRMEDELAKSVIGQGDAVQAVSRAVRRARAGLQDPN 596
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDDE +VR+DMSEYME+HSV+RLIGAPPGYVG
Sbjct: 597 RPIGSFIFLGPTGVGKTELTKALARFLFDDETAMVRMDMSEYMEKHSVARLIGAPPGYVG 656
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 657 YDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTMII 716
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L G + V R+QV++ VR HFRPE LNR+DEI++F L E++ +
Sbjct: 717 MTSNLGAEYLTQLRDGDDSDTV-REQVMEVVRGHFRPEFLNRIDEIILFHRLKREEMGAI 775
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+K + L+ER + + + + A + + YDP+YGARP++R ++K V L+ ++
Sbjct: 776 VDIQLKRLVALLSERKIVIDLDEEARHWLANKGYDPVYGARPLKRVIQKFVQDPLAEQIL 835
Query: 826 REEIDENSTVYI 837
++ + STV +
Sbjct: 836 SGQVPDGSTVTV 847
>gi|376265099|ref|YP_005117811.1| ClpB protein [Bacillus cereus F837/76]
gi|364510899|gb|AEW54298.1| ClpB protein [Bacillus cereus F837/76]
Length = 866
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/874 (52%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IAE+VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIAEIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R +FRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGYFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>gi|452951873|gb|EME57315.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus ruber
BKS 20-38]
Length = 851
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/865 (53%), Positives = 597/865 (69%), Gaps = 38/865 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + A++AG+ + P HL VALL GI A + G +
Sbjct: 4 FNP---TTKTQAAMTAAMQSASAAGNPEIRPAHLLVALLDQTDGIAAPLLKAVGVDPTV- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
R +++LP T A + + AQ D +++ + +++GL
Sbjct: 60 -VHREAQTLVERLPRATGATQTPQLGREAVAALTAAQHLATELDDEYVSTEHVLVGLAGG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
DS + L G A ++ +RG +V S + T+QAL+ Y DL +A GK
Sbjct: 119 DSDVAKLLVGHGATPAALRDAFTTVRGSA--RVTSPDPEGTYQALEKYSTDLTARAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+IALD+G++VAGAKYRGEFEERLKAVL E++E+ G+VI FIDE+H ++GAG T E +MDA
Sbjct: 237 VIALDLGSMVAGAKYRGEFEERLKAVLDEIKESAGQVITFIDELHTIVGAGATGESAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV V EPSV DTV ILRGLKE
Sbjct: 297 GNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEEID++
Sbjct: 357 RYEVHHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDSV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE AL+KE D+ASK RL ++R EL D R+KL L R++ EK ID +R +
Sbjct: 417 ERIVRRLEIEEMALQKETDEASKERLEKLRAELADEREKLNQLTTRWQNEKTAIDSVRGI 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQ---LEGNQSDENLMLTETVG 533
K++ E L + AER DL +AA+LRYG I ++E + + G +D ++ML E VG
Sbjct: 477 KEQLEALRGEEERAERDGDLGKAAELRYGRIPQLEKELERAAAASGAAADGDVMLKEEVG 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
PD +A+VV+ WTGIP R+ + E +R++G EAV +V+++V RSRAG+
Sbjct: 537 PDDVADVVAAWTGIPAGRMMEGETAKLLRMESELGKRVVGQDEAVQSVSDAVRRSRAGVA 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEY E+HSV+RL+GAPPG
Sbjct: 597 DPNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+E GGQLTEAVRRRPYSVVLFDEVEKAH VF+TLLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 657 YVGYESGGQLTEAVRRRPYSVVLFDEVEKAHPDVFDTLLQVLDDGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++I+TSNLGA R+ ++ VR F+PE +NRLD++VVF L+ EQL
Sbjct: 717 ILILTSNLGAGG-------------DREHIMAAVRAAFKPEFINRLDDVVVFHSLTEEQL 763
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++ +Q++ +A RLA R + L V+ +A + YDP YGARP+RR +++ + +L++
Sbjct: 764 EQIVDIQLEQLAGRLAARRLTLDVSSSARFWLAVRGYDPQYGARPLRRLIQQSIGDQLAK 823
Query: 823 MLVREEIDENSTVYIDASPKGDNLV 847
L+ +I + TV + S GD+LV
Sbjct: 824 KLLAGDIKDGDTVSVGVSDDGDHLV 848
>gi|237741424|ref|ZP_04571905.1| chaperone clpB [Fusobacterium sp. 4_1_13]
gi|229430956|gb|EEO41168.1| chaperone clpB [Fusobacterium sp. 4_1_13]
Length = 858
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/860 (49%), Positives = 604/860 (70%), Gaps = 36/860 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
MNP++FT T AI +A +++ P LA+ LL +G+ + I G +
Sbjct: 2 MNPNQFTENTISAINLAVDISKGNMQQSIKPEALALGLLMQNNGLIPRVIEKMGLNLQYI 61
Query: 59 AQSAERVFNQAMK---KLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
E+ N K K+ ++ + D+ S ++ RA+ GD+ L+V+ +
Sbjct: 62 ISELEKEMNNYPKVEVKISNENLSLDQKTNS-----ILNRAEKIMNEMGDSFLSVEHIFK 116
Query: 116 GLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++E+ I FK+ GV + + + +RG RKV++ + + T++ L+ Y +DLVE A
Sbjct: 117 AMIEEMPI---FKKLGVNLEKYMEVLMNIRG--NRKVDNQNPEATYEVLEKYAKDLVELA 171
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GK+DP+IGRD EIRR ++I+SRRTKN+P+LIGEPGVGKTA+VEGLAQRI+ GDVP +L
Sbjct: 172 REGKIDPIIGRDSEIRRAIQIISRRTKNDPILIGEPGVGKTAIVEGLAQRILNGDVPESL 231
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ ++ +LDMGALVAGAKY+GEFEER+K VLKEVEE+ G +ILFIDEIH ++GAG+ EGS
Sbjct: 232 KNKKIFSLDMGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGS 291
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
+DA N+ KPMLARG+LR IGATT++EYRKY+EKD A ERRFQ + V EP++ DT+SILRG
Sbjct: 292 LDAGNMLKPMLARGELRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNIDDTISILRG 351
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LK+K+E +HGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +R ++DS PEE+
Sbjct: 352 LKDKFETYHGVRIADAAIVEAATLSQRYITDRKLPDKAIDLIDEAAAMIRTEIDSMPEEL 411
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L RK +QLEIE+ AL+KE D ASK RL + KEL +L ++ + L +++ EKE I +I
Sbjct: 412 DQLTRKALQLEIEIKALQKETDDASKERLKIIEKELAELNEEKKVLTSKWELEKEDISKI 471
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLT 529
+ +K++ E + + +AER YDL + ++L+YG + +E + Q + N+ D ++ +L
Sbjct: 472 KNIKREIENVKLEMDKAEREYDLTKLSELKYGKLATLEKEL-QEQQNKIDKDGKDDSLLK 530
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSR 578
+ V D+IA++VSRWTGIPV++L + +KE+++ G EAV AVA+++LRS
Sbjct: 531 QEVTADEIADIVSRWTGIPVSKLTETKKEKMLHLEEHIKERVKGQDEAVKAVADTMLRSV 590
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P GSF+FLGPTGVGKT LAK LA LFD E+ +VRIDMSEYM++ SV+RLIG
Sbjct: 591 AGLKDPNRPMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDNVVRIDMSEYMDKFSVTRLIG 650
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEA+R +PYSV+LFDE+EKAH VFN LLQVLDDGRLTDGQGR VD
Sbjct: 651 APPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVD 710
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F+NT+IIMTSN+G+ HL+ + + R++V E++ F+PE LNR+DEI+ F L
Sbjct: 711 FKNTLIIMTSNIGS-HLI--LEDPALSESTREKVADELKARFKPEFLNRIDEIITFKALD 767
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++++ +L +KD+ +L + + L +D +D + +YDP YGARP+RR+++K++ T
Sbjct: 768 LSAIKEIVKLSLKDLENKLKPKHITLEFSDKMVDYLANNAYDPHYGARPLRRYIQKEIET 827
Query: 819 ELSRMLVREEIDENSTVYID 838
L++ ++ EI E S V ID
Sbjct: 828 SLAKKILANEIHEKSNVLID 847
>gi|339479979|gb|ABE96446.1| ClpB protein [Bifidobacterium breve UCC2003]
Length = 889
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/863 (52%), Positives = 605/863 (70%), Gaps = 35/863 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT EA+ A + A++AG+AQ LH+ ALL +G+ I AGG+ A A
Sbjct: 4 KFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVVRSLIEAAGGDPQAIGA-- 61
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
A+ LPS + + P AS L I +A+ + GD +++ + L++G+ + +
Sbjct: 62 AVRNALVALPSASGSSTSQPQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q ++ ++ GV A ++ V +RG G KV S + +++AL+ Y DL A GKLD
Sbjct: 122 QSAEILEKNGVTAASLRKAVPGVRG--GAKVTSPDAEGSYKALEKYSTDLTAAAKEGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L +LI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQGKKLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL E++ A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 240 SLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 300 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L+RK
Sbjct: 360 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ E+ +++ L+ K
Sbjct: 420 VTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAK 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG-----------NQSDENLML 528
++L + R +LA A+ + YG I ++ + E N +DE M+
Sbjct: 480 LDDLRVQADKFTREGNLAEASKILYGEIPAIQKELAAAESADAESADAGAENPADEP-MV 538
Query: 529 TETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRS 577
+ V D +AE+VS WTGIPV RL G+NEK +R+IG EA+ V+++V RS
Sbjct: 539 PDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLHMEDYLSKRVIGQKEAIATVSDAVRRS 598
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAG+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLI
Sbjct: 599 RAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLI 658
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GA PGYVG+E+GGQLTEAVRRRPYSVVLFDEVEKA+ +F+ LLQVLDDGRLTDGQGRTV
Sbjct: 659 GAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+NT++IMTSNLG++ L++ M + A V+ V +F+PE LNRLD+IV+F PL
Sbjct: 719 DFKNTILIMTSNLGSQFLVNEDMDADAKKRA---VMDAVHMNFKPEFLNRLDDIVMFHPL 775
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ E+L + +Q+K VA RL +R + L VTD+A + + YDP YGARP+RR ++ +V
Sbjct: 776 TREELGGIVDIQVKGVAQRLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVG 835
Query: 818 TELSRMLVREEIDENSTVYIDAS 840
+L+RML+ ++ + TV +D +
Sbjct: 836 DQLARMLLAGKVHDGDTVLVDQT 858
>gi|378446075|ref|YP_005233707.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|261247854|emb|CBG25683.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
Length = 857
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/854 (51%), Positives = 594/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S+ L++V+ + GD ++ + +L LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV+R+ ++E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVSRMLESEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ VL V ++FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ + ++A+
Sbjct: 836 GELVPGKVIRLEAN 849
>gi|25029169|ref|NP_739223.1| endopeptidase Clp ATP-binding subunit B [Corynebacterium efficiens
YS-314]
gi|54035859|sp|Q8FM94.1|CLPB_COREF RecName: Full=Chaperone protein ClpB
gi|23494457|dbj|BAC19423.1| putative endopeptidase Clp ATP-binding chain B [Corynebacterium
efficiens YS-314]
Length = 852
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/864 (53%), Positives = 592/864 (68%), Gaps = 39/864 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG--GENA 58
NP T KT+EA+ A + A++ G+ P HL VA+L G+ A + AG +
Sbjct: 4 FNP---TTKTSEAMQAALQQASANGNPDIRPAHLLVAILDQADGVAAPVLTAAGVDPKTI 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A+++ + K S P+ + + + +Q GD +++ + L+ G+
Sbjct: 61 LAEAQKLVDGYPKASGSNLANPN---FNRDALNALTASQELAGELGDEYVSTEVLLAGIA 117
Query: 119 E-DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
S DL K G +K+ + +RG + KV S + FQAL+ Y DL + A
Sbjct: 118 RGKSDAADLLKGKGATYDAIKAAFQSVRGSQ--KVTSQDPEGQFQALEKYSTDLTKLARE 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GK+DPVIGRD+EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLA+RIV GDVP +L
Sbjct: 176 GKIDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKG 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSM 294
LI+LD+G++VAGAKYRGEFEERLKAVL E++ A G+++ FIDE+H ++GAG + E +M
Sbjct: 236 KTLISLDLGSMVAGAKYRGEFEERLKAVLDEIKGANGEIVTFIDELHTIVGAGASGESAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KP+LARG+LR +GATTL EYRKY+EKD A ERRFQQVYV EPSV DTV ILRGL
Sbjct: 296 DAGNMIKPLLARGELRLVGATTLNEYRKYIEKDTALERRFQQVYVGEPSVEDTVGILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGVRIQD ALV AA+LS RYIT R LPDKAIDLVDEA + +R+++DS P+EID
Sbjct: 356 KERYEVHHGVRIQDSALVAAAELSHRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEID 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
LER +LEIE AL KE D AS+ RL +R EL D R+KL L R++ EK ID++R
Sbjct: 416 ELERIVRRLEIEEVALTKETDVASRERLERLRSELADEREKLSELKARWQNEKAVIDDVR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVG 533
+ K++ E L AER D R A+LRYG I E+E I + E +N MLTE V
Sbjct: 476 KFKEELEALRSESDIAEREGDYGRVAELRYGRIPELEKKIAEAEEKIGGADNSMLTEEVT 535
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
P+ IAEVVS WTGIP ++ Q E E R++G EAV AV+++V RSRAG+
Sbjct: 536 PEVIAEVVSAWTGIPAGKMMQGETEKLLNMERFLGKRVVGQHEAVTAVSDAVRRSRAGVA 595
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +PTGSFLFLGPTGVGKTELAKA++E LFDDE +VRIDMSEY E+HSV+RL+GAPPG
Sbjct: 596 DPNRPTGSFLFLGPTGVGKTELAKAVSEFLFDDERAMVRIDMSEYSEKHSVARLVGAPPG 655
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+++GGQLTEAVRRRPY+ VLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 656 YVGYDQGGQLTEAVRRRPYTTVLFDEVEKAHPDVFDILLQVLDDGRLTDGQGRTVDFRNT 715
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++I+TSNLGA R+Q++ V+ F+PE +NRLD+IVVFDPLS EQL
Sbjct: 716 ILILTSNLGAGG-------------TREQMMDAVKMAFKPEFINRLDDIVVFDPLSQEQL 762
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ +A RL++R + L V+DAA + YDP YGARP+RR +++ + +L++
Sbjct: 763 ASIVEIQISQLAERLSDRRLTLRVSDAAKLWLAERGYDPAYGARPLRRLIQQAIGDQLAK 822
Query: 823 MLVREEIDENSTVYIDASPKGDNL 846
L+ EI + V +D + G L
Sbjct: 823 ELLAGEIRDGDRVLVDVADGGQYL 846
>gi|207858010|ref|YP_002244661.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|378956364|ref|YP_005213851.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|421360375|ref|ZP_15810657.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421361704|ref|ZP_15811961.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421369377|ref|ZP_15819552.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421370962|ref|ZP_15821123.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421378529|ref|ZP_15828613.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421383159|ref|ZP_15833201.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421386614|ref|ZP_15836625.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421389951|ref|ZP_15839927.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421394229|ref|ZP_15844171.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421400925|ref|ZP_15850806.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421403251|ref|ZP_15853104.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421410027|ref|ZP_15859812.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421412138|ref|ZP_15861900.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421415313|ref|ZP_15865041.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421423252|ref|ZP_15872912.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421427902|ref|ZP_15877520.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421430574|ref|ZP_15880160.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421433808|ref|ZP_15883365.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421440416|ref|ZP_15889896.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421444185|ref|ZP_15893623.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|436611647|ref|ZP_20513921.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436798555|ref|ZP_20523439.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436810228|ref|ZP_20529335.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436812334|ref|ZP_20530913.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436832908|ref|ZP_20537198.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436852710|ref|ZP_20542768.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436861467|ref|ZP_20548651.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436862274|ref|ZP_20549069.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436872649|ref|ZP_20555531.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436882986|ref|ZP_20561570.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436891271|ref|ZP_20565971.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436897935|ref|ZP_20570103.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436903329|ref|ZP_20573793.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436914583|ref|ZP_20579430.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436919284|ref|ZP_20582065.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436923294|ref|ZP_20585134.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436938811|ref|ZP_20593598.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436944521|ref|ZP_20596968.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436948206|ref|ZP_20598478.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436960075|ref|ZP_20604146.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436973706|ref|ZP_20610830.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436985723|ref|ZP_20615173.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436998540|ref|ZP_20620023.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437010458|ref|ZP_20624268.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437015822|ref|ZP_20625967.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437027158|ref|ZP_20630047.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437043329|ref|ZP_20636842.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437053314|ref|ZP_20642429.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437062236|ref|ZP_20647602.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437067153|ref|ZP_20650215.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437078303|ref|ZP_20656000.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437085710|ref|ZP_20660261.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437096519|ref|ZP_20664876.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437115753|ref|ZP_20669509.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437118290|ref|ZP_20670257.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437132350|ref|ZP_20677874.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437140770|ref|ZP_20682744.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437148596|ref|ZP_20687651.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437155766|ref|ZP_20691984.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437163186|ref|ZP_20696495.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437168948|ref|ZP_20699386.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437179490|ref|ZP_20705405.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437188751|ref|ZP_20710546.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437263399|ref|ZP_20719573.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437269919|ref|ZP_20723088.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437273894|ref|ZP_20724987.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437302718|ref|ZP_20733644.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437315526|ref|ZP_20737214.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437327398|ref|ZP_20740340.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437342506|ref|ZP_20745414.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437411738|ref|ZP_20752916.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437443261|ref|ZP_20758006.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437467132|ref|ZP_20764352.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437475832|ref|ZP_20766909.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437495015|ref|ZP_20772615.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437503209|ref|ZP_20774826.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437542120|ref|ZP_20782544.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437555930|ref|ZP_20784897.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437579134|ref|ZP_20791659.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437586610|ref|ZP_20793465.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437608524|ref|ZP_20800713.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437624017|ref|ZP_20805185.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437650000|ref|ZP_20809637.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437662975|ref|ZP_20813696.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437677959|ref|ZP_20817450.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437690912|ref|ZP_20820543.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437714417|ref|ZP_20827651.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437794804|ref|ZP_20837444.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437801405|ref|ZP_20838137.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437965280|ref|ZP_20852572.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|438094745|ref|ZP_20861700.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438104522|ref|ZP_20865879.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438111003|ref|ZP_20868291.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|438148248|ref|ZP_20876294.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|445171861|ref|ZP_21396270.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445183346|ref|ZP_21398674.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445228312|ref|ZP_21404655.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445327269|ref|ZP_21412731.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445348332|ref|ZP_21419617.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445354827|ref|ZP_21421632.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|206709813|emb|CAR34165.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|357206975|gb|AET55021.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|395981500|gb|EJH90721.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395982460|gb|EJH91668.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395992138|gb|EJI01257.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395996258|gb|EJI05310.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|395996388|gb|EJI05439.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396005582|gb|EJI14560.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396012437|gb|EJI21334.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396015010|gb|EJI23893.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396015555|gb|EJI24429.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396021759|gb|EJI30574.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396022904|gb|EJI31707.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396029199|gb|EJI37937.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396037731|gb|EJI46377.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396043381|gb|EJI51984.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396048102|gb|EJI56664.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396050475|gb|EJI58999.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396054400|gb|EJI62892.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396061471|gb|EJI69896.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396068551|gb|EJI76899.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396068934|gb|EJI77279.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|434938293|gb|ELL45288.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434960435|gb|ELL53814.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434965476|gb|ELL58417.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434969476|gb|ELL62180.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434976430|gb|ELL68666.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434981507|gb|ELL73394.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434984643|gb|ELL76371.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434985911|gb|ELL77598.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434999274|gb|ELL90471.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|434999506|gb|ELL90680.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435002972|gb|ELL94017.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435005400|gb|ELL96320.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435014066|gb|ELM04676.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435019759|gb|ELM10203.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435022665|gb|ELM12961.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435029119|gb|ELM19177.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435034335|gb|ELM24225.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435039526|gb|ELM29296.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435041922|gb|ELM31655.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435053115|gb|ELM42569.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435053339|gb|ELM42791.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435056264|gb|ELM45655.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435061294|gb|ELM50523.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435061936|gb|ELM51132.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435066629|gb|ELM55708.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435083249|gb|ELM71854.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435083979|gb|ELM72580.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435085217|gb|ELM73770.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435088720|gb|ELM77177.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435089445|gb|ELM77878.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435097959|gb|ELM86218.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435101703|gb|ELM89836.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435104396|gb|ELM92451.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435107420|gb|ELM95404.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435114647|gb|ELN02440.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435122620|gb|ELN10135.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435129687|gb|ELN16975.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435132008|gb|ELN19212.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435133227|gb|ELN20407.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435137798|gb|ELN24836.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435142129|gb|ELN29046.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435149425|gb|ELN36121.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435150574|gb|ELN37239.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435155353|gb|ELN41901.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435160853|gb|ELN47097.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435171755|gb|ELN57318.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435177017|gb|ELN62364.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435177884|gb|ELN63148.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435180002|gb|ELN65110.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435191579|gb|ELN76135.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435192908|gb|ELN77417.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435204076|gb|ELN87791.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435211052|gb|ELN94264.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435215781|gb|ELN98265.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435222977|gb|ELO05024.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435226964|gb|ELO08501.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435235713|gb|ELO16496.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435237204|gb|ELO17903.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435241583|gb|ELO21929.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435242380|gb|ELO22691.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435252808|gb|ELO32316.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435254698|gb|ELO34082.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435259776|gb|ELO38990.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435267027|gb|ELO45751.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435268272|gb|ELO46866.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435274339|gb|ELO52455.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435281395|gb|ELO59069.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435286019|gb|ELO63360.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435291842|gb|ELO68638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435304065|gb|ELO79876.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435314312|gb|ELO87737.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435322168|gb|ELO94486.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435331518|gb|ELP02669.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|435339920|gb|ELP08612.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|444861013|gb|ELX85908.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444866249|gb|ELX90987.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444870831|gb|ELX95302.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444876273|gb|ELY00452.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444880864|gb|ELY04927.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444887448|gb|ELY11148.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
Length = 857
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/854 (51%), Positives = 592/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S+ L++V+ + GD ++ + +L LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ VL V ++FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ + ++AS
Sbjct: 836 GELVPGKVIRLEAS 849
>gi|16761514|ref|NP_457131.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|16765976|ref|NP_461591.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|29142985|ref|NP_806327.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|167992437|ref|ZP_02573535.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168244680|ref|ZP_02669612.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194448814|ref|YP_002046666.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197265769|ref|ZP_03165843.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|213051813|ref|ZP_03344691.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213649749|ref|ZP_03379802.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213850142|ref|ZP_03381040.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289824160|ref|ZP_06543755.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|374981290|ref|ZP_09722618.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|378451422|ref|YP_005238782.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378700559|ref|YP_005182516.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378960787|ref|YP_005218273.1| hypothetical protein STBHUCCB_27630 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|378990038|ref|YP_005253202.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379701895|ref|YP_005243623.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383497334|ref|YP_005398023.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386592406|ref|YP_006088806.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|419728971|ref|ZP_14255933.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419734207|ref|ZP_14261101.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419739788|ref|ZP_14266531.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419745026|ref|ZP_14271670.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419749085|ref|ZP_14275574.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421569097|ref|ZP_16014803.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421576391|ref|ZP_16021991.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421580578|ref|ZP_16026133.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421585217|ref|ZP_16030718.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|422029085|ref|ZP_16375372.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422034033|ref|ZP_16380081.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427559032|ref|ZP_18930585.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427577459|ref|ZP_18935334.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427580449|ref|ZP_18935833.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427614308|ref|ZP_18942999.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427647668|ref|ZP_18949985.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427659054|ref|ZP_18954643.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427664422|ref|ZP_18959627.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427683412|ref|ZP_18964451.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427802802|ref|ZP_18970120.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|54035784|sp|Q7AMH5.1|CLPB_SALTI RecName: Full=Chaperone protein ClpB
gi|54035786|sp|Q7CQ01.1|CLPB_SALTY RecName: Full=Chaperone protein ClpB
gi|25289914|pir||AI0831 ClpB protein (heat shock protein f84.1) [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16421207|gb|AAL21550.1| ATP-dependent protease [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16503815|emb|CAD05840.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29138617|gb|AAO70187.1| ClpB protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|194407118|gb|ACF67337.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197244024|gb|EDY26644.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205329269|gb|EDZ16033.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205336469|gb|EDZ23233.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|267994801|gb|ACY89686.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159207|emb|CBW18722.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|321223454|gb|EFX48519.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323130994|gb|ADX18424.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|332989585|gb|AEF08568.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|374354659|gb|AEZ46420.1| hypothetical protein STBHUCCB_27630 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|380464155|gb|AFD59558.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|381297674|gb|EIC38761.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381298111|gb|EIC39193.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381298283|gb|EIC39363.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381306782|gb|EIC47652.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381312527|gb|EIC53325.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383799450|gb|AFH46532.1| ClpB protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|402518796|gb|EJW26167.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402519783|gb|EJW27143.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402528382|gb|EJW35638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402530399|gb|EJW37619.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|414010482|gb|EKS94492.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414010674|gb|EKS94670.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414011341|gb|EKS95305.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414025628|gb|EKT08946.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414035015|gb|EKT17919.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414038868|gb|EKT21570.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414039633|gb|EKT22303.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414040024|gb|EKT22662.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414044093|gb|EKT26555.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414053652|gb|EKT35638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414055415|gb|EKT37309.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
Length = 857
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/854 (51%), Positives = 593/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S+ L++V+ + GD ++ + +L LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV+R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ VL V ++FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ + ++A+
Sbjct: 836 GELVPGKVIRLEAN 849
>gi|395231533|ref|ZP_10409821.1| disaggregation chaperone [Citrobacter sp. A1]
gi|424734303|ref|ZP_18162842.1| protein disaggregation chaperone [Citrobacter sp. L17]
gi|394714742|gb|EJF20646.1| disaggregation chaperone [Citrobacter sp. A1]
gi|422891883|gb|EKU31894.1| protein disaggregation chaperone [Citrobacter sp. L17]
Length = 857
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/854 (51%), Positives = 591/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S L++V+ + GD ++ + +L +LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSQELVRVLNLCDKLAQKRGDNFISSELFVLAVLES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKECQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ +D VL V +FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGHMKDMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ T+ ++ +
Sbjct: 836 GELIPGKTIRLEVN 849
>gi|298253232|ref|ZP_06977024.1| ClpB ATP-binding subunit of Clp protease [Gardnerella vaginalis
5-1]
gi|297532627|gb|EFH71513.1| ClpB ATP-binding subunit of Clp protease [Gardnerella vaginalis
5-1]
Length = 864
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/867 (51%), Positives = 609/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + A +AG+AQ LHLA ALL G+ I G + AE
Sbjct: 4 KFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQTGADAQQIGAE- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-- 121
A+ LPS T + P AS L+ + +A+ A GD +++ + +++G++ +
Sbjct: 63 -IRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMYAMGDEYVSTEHMLIGIVASAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 122 AVADIFKKHNVSADALRKAVPTVRG--GAKVTSPDAEGNYKALEKYSVDMTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPMTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVLKE+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 240 SLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EYR+++EKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 300 LKPMLARGELRLVGATTLNEYREHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A+K RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDAAAKERLEKLQEELANSREKLTGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E ++ E + PDQ
Sbjct: 480 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESEAANAKSEAKEPMVPDQVDA 539
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 540 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 600 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 660 IGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PLS E+L
Sbjct: 720 LIMTSNLGSQFLVQEGLDDAA---KRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELG 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ VA RL++R ++L V+D+A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 777 GIVDIQVRQVAARLSDRRISLDVSDSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 836
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + V D D+++ ++
Sbjct: 837 LLSGKVHDGARVVADCENTSDHVILKI 863
>gi|87200837|ref|YP_498094.1| ATPase AAA [Novosphingobium aromaticivorans DSM 12444]
gi|87136518|gb|ABD27260.1| AAA ATPase, central region [Novosphingobium aromaticivorans DSM
12444]
Length = 859
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/860 (52%), Positives = 599/860 (69%), Gaps = 34/860 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + + A +A H + TP H+ ALL D G+ + I AGG NAA
Sbjct: 1 MNLEKFTDRAKGFLQAAQTVAIRMNHQRITPDHILKALLEDSEGMASGLIQRAGG-NAAL 59
Query: 61 SAERVFNQAMKKLPS-------QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQL 113
+ V ++A+ K+P+ TP D ++V+ A+ D+ + V+++
Sbjct: 60 AQTEV-DKALAKIPAVSGSGAQATPGLD-----NDAVRVLDSAEQIAAKSNDSFVTVERM 113
Query: 114 I--LGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL 171
+ L L + G K A V +++ + +LRG GR +SAS + + A+K Y RDL
Sbjct: 114 LVALTLATTTSAGQALKAANVTAQALEAAITQLRG--GRTADSASAENAYDAMKKYARDL 171
Query: 172 VEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDV 229
E A GKLDPVIGRDEEIRR V+IL+RRTKNNP LIGEPGVGKTA+ EGLA RI GDV
Sbjct: 172 TEAAREGKLDPVIGRDEEIRRTVQILARRTKNNPALIGEPGVGKTAIAEGLALRIANGDV 231
Query: 230 PSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGR 289
P +L D RL+ALDMG+L+AGAKYRGEFEERLKAVL EV+ AEG++ILFIDE+H ++GAG+
Sbjct: 232 PDSLKDRRLMALDMGSLIAGAKYRGEFEERLKAVLDEVKGAEGEIILFIDEMHTLIGAGK 291
Query: 290 TEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVS 349
+EG+MDA NL KP LARG+L CIGATTL+EY+KYVEKD A +RRFQ V+V EP+V DT+S
Sbjct: 292 SEGAMDAGNLLKPALARGELHCIGATTLDEYQKYVEKDPALQRRFQPVFVGEPTVEDTIS 351
Query: 350 ILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQ 409
ILRG+K+KYE HHGVRI D A+V AA LS RYI+ R LPDKAIDL+DEA + +R++++S+
Sbjct: 352 ILRGIKDKYELHHGVRIADNAIVAAATLSNRYISDRFLPDKAIDLMDEAASRIRMEVESK 411
Query: 410 PEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKER 469
PEEI+ L+R+ +Q++IE AL KE D+ASK RL +R+EL + + L R++ E+++
Sbjct: 412 PEEIEKLDRRIIQMKIEEMALAKETDQASKDRLATLREELANQEQQSAELTTRWQNERDK 471
Query: 470 IDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT 529
I ++K+ + L+ A+R DLA+A +L YG I E+E + + +G +N ML
Sbjct: 472 IAAEGKVKEALDAARSELEVAQRNGDLAKAGELAYGRIPELERQLAEAQG--VSQNAMLR 529
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSR 578
E V + IA VVS+WTG+PV R+ + E+E+L IG +AV AV+++V R+R
Sbjct: 530 EEVTAEDIAAVVSKWTGVPVDRMMEGEREKLLHMEEALGKRVIGQKDAVLAVSKAVRRAR 589
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P GSFLFLGPTGVGKTEL KALA LFDD+N +VRIDMSE+ME+HSVSRLIG
Sbjct: 590 AGLQDPNRPLGSFLFLGPTGVGKTELTKALAGFLFDDDNAMVRIDMSEFMEKHSVSRLIG 649
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG++EGG LTEA+RRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGR VD
Sbjct: 650 APPGYVGYDEGGVLTEAIRRRPYQVVLFDEVEKAHSDVFNVLLQVLDDGRLTDGQGRVVD 709
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F NT+II+TSNLG+++L + G+ +Q QV+ VR HFRPE LNRLDEI++F L
Sbjct: 710 FTNTLIILTSNLGSQYLANLEEGQ-DVQSVEPQVMDVVRAHFRPEFLNRLDEIILFHRLG 768
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
HE + + +Q+ VA L +R + L +TDAA + YDP+YGARP++R +++ +
Sbjct: 769 HEHMAPIVDIQVGRVANLLKDRKIVLDLTDAAKRWLGRVGYDPVYGARPLKRAVQRYLQD 828
Query: 819 ELSRMLVREEIDENSTVYID 838
L+ L+ E+ + STV ID
Sbjct: 829 PLAEKLLGGEVPDGSTVRID 848
>gi|68535266|ref|YP_249971.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Corynebacterium jeikeium K411]
gi|68262865|emb|CAI36353.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
[Corynebacterium jeikeium K411]
Length = 873
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/857 (52%), Positives = 594/857 (69%), Gaps = 40/857 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE--NA 58
NP T T A+ A + A++ G+ P HL VALL I + AG E
Sbjct: 4 FNP---TTMTQSAMQAALQDASAKGNPDIRPAHLLVALLEQEDSIALPVLQAAGVEPQTI 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A A+ + + S+ P + + + AQ + GDT+++ + L+ G+
Sbjct: 61 AAKAKNLVAGYPQATGSEMANPQ---FNRDALNALTAAQELAEQLGDTYVSTEVLLAGIA 117
Query: 119 E-DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ +S + EAG ++ E +RG RKV + + FQAL+ Y DL +A
Sbjct: 118 KGNSDAAKVMHEAGATFEAIRGAFESVRGN--RKVTTEEPEGQFQALEKYSTDLTARARE 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GK+DPVIGRD+EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLA+RIV GDVP +L
Sbjct: 176 GKIDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLRG 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSM 294
+LI+LD+G++VAGAKYRGEFEERLKAVL E++EAEG+V+ FIDE+H ++GAG + +M
Sbjct: 236 KKLISLDLGSMVAGAKYRGEFEERLKAVLDEIKEAEGEVVTFIDELHTIVGAGAGGDSAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KP+LARG+LR +GATTL+EYRKY+EKDAA ERRFQQVYV EP+ DT+ ILRGL
Sbjct: 296 DAGNMIKPLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVYVGEPTAEDTIGILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEEID
Sbjct: 356 KERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEID 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
N+ER +LEIE ALEKE D ASK RL +R EL D ++KL L R++ EK ID +R
Sbjct: 416 NVERVVRRLEIEEMALEKETDAASKDRLERLRSELADEKEKLAGLTARWENEKGSIDSLR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTETV 532
LK++ + L + AER D A+ A+LRYG I +VE + + E + E +MLTE V
Sbjct: 476 ELKEELDNLRRESEIAEREGDFAKVAELRYGHIPDVEKKLAEAEETVAEQQEGMMLTEEV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGL 581
PD IA+VVS WTG+P ++ Q E E R++G AV+AV+++V R+RAG+
Sbjct: 536 TPDTIADVVSAWTGVPAGKMLQGETEKLLNMELVLGGRVVGQHRAVDAVSDAVRRARAGV 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEY E+HSV+RL+GAPP
Sbjct: 596 ADPNRPTGSFLFLGPTGVGKTELAKALADFLFDDETAMVRIDMSEYGEKHSVARLVGAPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++ GGQLTEAVRRRPY+VVLFDEVEKAH VF+ LLQVLD+GRLTDGQGRTVDFRN
Sbjct: 656 GYVGYDAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRN 715
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T++I+TSNLGA ++V++ V++ F+PE +NRLD++++FDPLS EQ
Sbjct: 716 TILILTSNLGAGG-------------TDEEVMEAVKRAFKPEFINRLDDVLIFDPLSAEQ 762
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L+ + +Q+ +A RLA R + L VTD A + YDP YGARP+RR ++K + +L+
Sbjct: 763 LKSIVSIQVGTLAERLAARRLILDVTDDAQSWLAEHGYDPAYGARPLRRLIQKAIGDQLA 822
Query: 822 RMLVREEIDENSTVYID 838
+ L+ E+ + TV +D
Sbjct: 823 KKLLAGEVRDGDTVRVD 839
>gi|415714012|ref|ZP_11465392.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 1400E]
gi|388059370|gb|EIK82110.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 1400E]
Length = 864
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/867 (51%), Positives = 610/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + +AG+AQ LHLA ALL G+ I AG + AE
Sbjct: 4 KFTTLAQDALSDAVQSTAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIGAE- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-- 121
A+ LPS T + P AS L+ + +A+ +A GD +++ + +++G++ +
Sbjct: 63 -IRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMRAMGDEYVSTEHMLIGMVASAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 122 AVADIFKKHNVSADALRKAVPTVRG--GAKVTSPDAEGNYKALEKYSVDMTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVLKE+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 240 SLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EYR+++EKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 300 LKPMLARGELRLVGATTLNEYREHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A++ RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDAAARERLEKLQEELANSREKLAGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E ++ E + PDQ
Sbjct: 480 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESEAANAKSEAKEPMVPDQVDA 539
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 540 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 600 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 660 IGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PLS E+L
Sbjct: 720 LIMTSNLGSQFLVQEGLDDAA---KRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELG 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ VA RL++R ++L V+D+A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 777 GIVDIQVRQVAARLSDRRISLDVSDSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 836
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + V D D++ ++
Sbjct: 837 LLSGKVHDGARVVADCENTSDHVTLKI 863
>gi|116254016|ref|YP_769854.1| chaperone ClpB (heat-shock protein) [Rhizobium leguminosarum bv.
viciae 3841]
gi|115258664|emb|CAK09768.1| putative chaperone ClpB (heat-shock protein) [Rhizobium
leguminosarum bv. viciae 3841]
Length = 866
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/852 (52%), Positives = 592/852 (69%), Gaps = 20/852 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ + I A A + GH QFTP H+ LL D G+ A I AGG+ A+
Sbjct: 1 MNIEKYSERVRGFIQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGGD--AK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+A + A+ KLP + I + L KV+ A+ A K GD+ + V++L+ L +
Sbjct: 59 AARLANDAALAKLPKISGGNGNIYLAQPLAKVLSTAEEAAKKAGDSFVTVERLLQALSIE 118
Query: 121 SQIGDL--FKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
S K AGV + + +R +GR +S++ + F +LK + RDL +A G
Sbjct: 119 SSASTFSTLKNAGVTAQGLNQVINDIR--KGRTADSSNAEQGFDSLKKFARDLTAEAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ G++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 KLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVVVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYIT R LPDKAIDL+DEA A +R+Q+DS+PEE+D L
Sbjct: 357 KYEQHHKVRIADAALVAAATLSNRYITDRFLPDKAIDLMDEAAARLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+KE D AS RL + E+ DL ++ L R++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKKETDVASADRLKRLETEVTDLEEQADALTARWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ ++ L A+R+ + RA +L YG I ++E + E D M+ E V PD
Sbjct: 477 KKQLDDARNELAIAQRKGEFQRAGELTYGVIPDLEKQLVDAEKQDGDRGAMVQEVVIPDN 536
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA VVSRWTGIPV R+ + E+++L IG +AV AV+ +V R+RAGL P
Sbjct: 537 IAHVVSRWTGIPVDRMLEGERDKLLRMEDELAKSVIGQGDAVQAVSRAVRRARAGLQDPN 596
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDDE +VR+DMSEYME+HSV+RLIGAPPGYVG
Sbjct: 597 RPIGSFIFLGPTGVGKTELTKALARFLFDDETAMVRMDMSEYMEKHSVARLIGAPPGYVG 656
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 657 YDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTMII 716
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L G + V R+QV++ VR HFRPE LNR+DEI++F L E++ +
Sbjct: 717 MTSNLGAEYLTQLRDGDDSDTV-REQVMEVVRGHFRPEFLNRIDEIILFHRLKREEMGAI 775
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+K + L+ER + + + + A + + YDP+YGARP++R ++K V L+ ++
Sbjct: 776 VDIQLKRLVALLSERKIVIDLDEEARHWLANKGYDPVYGARPLKRVIQKFVQDPLAEQIL 835
Query: 826 REEIDENSTVYI 837
++ + STV +
Sbjct: 836 SGQVPDGSTVTV 847
>gi|436751232|ref|ZP_20520160.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|434970226|gb|ELL62855.1| protein disaggregation chaperone, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
Length = 855
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/854 (51%), Positives = 592/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S+ L++V+ + GD ++ + +L LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ VL V ++FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ + ++AS
Sbjct: 836 GELVPGKVIRLEAS 849
>gi|365101806|ref|ZP_09332436.1| chaperone ClpB [Citrobacter freundii 4_7_47CFAA]
gi|363647356|gb|EHL86585.1| chaperone ClpB [Citrobacter freundii 4_7_47CFAA]
Length = 857
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/854 (51%), Positives = 590/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S L++V+ + GD ++ + +L LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSQELVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ +D VL V +FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGHMKDMVLGVVSNNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ T+ ++ +
Sbjct: 836 GELIPGKTIRLEVN 849
>gi|149201484|ref|ZP_01878459.1| ATPase AAA-2 [Roseovarius sp. TM1035]
gi|149145817|gb|EDM33843.1| ATPase AAA-2 [Roseovarius sp. TM1035]
Length = 872
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/857 (51%), Positives = 597/857 (69%), Gaps = 20/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +KFT ++ I A +A H + +P H+ ALL DP G+ + I AGG A +
Sbjct: 1 MDFNKFTERSRGFIQAAQTIAMRESHQKLSPEHILKALLDDPEGLASNLIKRAGG--APE 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-LE 119
+ + A+ K+P + + KV+ A+ + GD+ + V++++ L L
Sbjct: 59 RVTQANDIALAKIPRVSGDAGQTYMDQQTGKVLAEAEKLAQKAGDSFVPVERILTALALV 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
S D + V+ ++ + +R +GR +SAS + T++AL+ Y RDL + A GK
Sbjct: 119 KSPAKDALEAGAVSAQKLNEAINDIR--KGRTADSASAEDTYEALEKYARDLTKAAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DP+IGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L + R
Sbjct: 177 IDPIIGRDDEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLRNKR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L++LDMGAL+AGAKYRGEFEERLK VL EV +A G++ILFIDE+H ++GAG+ +G+MDAA
Sbjct: 237 LLSLDMGALIAGAKYRGEFEERLKGVLNEVTQAAGEIILFIDEMHTLVGAGKADGAMDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ + V EP+V DT+SILRG+KEK
Sbjct: 297 NLIKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPLVVEEPTVEDTISILRGIKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+++DS+PEE+D L+
Sbjct: 357 YELHHGVRISDSALVAAATLSHRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEELDALD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +Q +IE AL+KE D ASK RL ++ +EL DL+ + + +++ E++++ R LK
Sbjct: 417 REILQKQIEAEALKKEDDAASKDRLEKLERELGDLQQRSSEMTAKWQAERDKLAGARDLK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
++ + L A+R +LARA +L YG I +E + + E Q D+ +M+ E V P+QI
Sbjct: 477 EQLDRARAELDIAKREGNLARAGELSYGVIPGLEKKLAEAE-TQGDDGVMVEEAVRPEQI 535
Query: 538 AEVVSRWTGIPVTRLGQNEKERLIGL-----------AEAVNAVAESVLRSRAGLGRPQQ 586
A+VV RWTGIP ++ + E+++L+G+ AV AVA +V R+RAGL +
Sbjct: 536 AQVVERWTGIPTAKMLEGERDKLLGMEANLHRRVIGQNTAVKAVANAVRRARAGLNDEGR 595
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KA+AE LFDD++ +VRIDMSE+ME+HSVSRLIGAPPGYVG+
Sbjct: 596 PLGSFLFLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHSVSRLIGAPPGYVGY 655
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
+EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDG LTDGQGRTVDF+ T+II+
Sbjct: 656 DEGGVLTEAVRRRPYQVVLFDEVEKAHPEVFNVLLQVLDDGVLTDGQGRTVDFKQTLIIL 715
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L G RD V+ VR HFRPE LNRLDEIVVFD L+ Q+ +
Sbjct: 716 TSNLGSQALSQLPEGADAATAKRD-VMDAVRSHFRPEFLNRLDEIVVFDRLTRPQMDGIV 774
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+QM + RLA R + LA+ DAA + E YDP+YGARP++R +++ + L+ L+
Sbjct: 775 DIQMSRLLKRLAARKITLALDDAAHKWLADEGYDPVYGARPLKRVIQRALQDPLAEALLS 834
Query: 827 EEIDENSTVYIDASPKG 843
EI + + V + A P+G
Sbjct: 835 GEILDGAVVPVTAGPEG 851
>gi|317482990|ref|ZP_07941994.1| ATP-dependent chaperone ClpB [Bifidobacterium sp. 12_1_47BFAA]
gi|316915597|gb|EFV37015.1| ATP-dependent chaperone ClpB [Bifidobacterium sp. 12_1_47BFAA]
Length = 889
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/861 (52%), Positives = 603/861 (70%), Gaps = 35/861 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT EA+ A + A++AG+AQ LH+ ALL +G+ I AGG+ A A
Sbjct: 4 KFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDPQAIGA-- 61
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
A+ LPS + + P AS L I +A+ + GD +++ + L++G+ + +
Sbjct: 62 AVRNALVALPSASGSSTSQPQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q ++ ++ GV A ++ V +RG G KV S + +++AL+ Y DL A GKLD
Sbjct: 122 QSAEILEKNGVTAASLRKAVPGVRG--GAKVTSPDAEGSYKALEKYSTDLTAAAKEGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L +LI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQGKKLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL E++ A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 240 SLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 300 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L+RK
Sbjct: 360 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ E+ +++ L+ K
Sbjct: 420 VTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAK 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE-----------GNQSDENLML 528
++L + R +LA A+ + YG I ++ + E N +DE M+
Sbjct: 480 LDDLRVQADKYTREGNLAEASKILYGEIPSIQKELAAAESADAESTDASAANPADEP-MV 538
Query: 529 TETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRS 577
+ V D +AE+VS WTGIPV RL G+NEK +R+IG EA+ AV+++V RS
Sbjct: 539 PDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRS 598
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAG+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLI
Sbjct: 599 RAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLI 658
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GA PGYVG+E+GGQLTEAVRRRPYSVVLFDEVEKA+ +F+ LLQVLDDGRLTDGQGRTV
Sbjct: 659 GAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+NT++IMTSNLG++ L++ M + V+ V +F+PE LNRLD+IV+F PL
Sbjct: 719 DFKNTILIMTSNLGSQFLVNEDM---DADAKKKAVMDAVHMNFKPEFLNRLDDIVMFHPL 775
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ E+L + +Q+ VA RL +R + L VTD+A + + YDP YGARP+RR ++ +V
Sbjct: 776 TREELGGIVDIQVAGVAQRLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVG 835
Query: 818 TELSRMLVREEIDENSTVYID 838
+L+RML+ ++ + TV +D
Sbjct: 836 DQLARMLLAGKVHDGDTVLVD 856
>gi|415711243|ref|ZP_11464056.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 55152]
gi|388058554|gb|EIK81344.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 55152]
Length = 864
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/867 (51%), Positives = 611/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + A +AG+AQ LHLA ALL G+ I AG + AE
Sbjct: 4 KFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIGAE- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-- 121
A+ LPS T + P AS L+ + +A+ +A GD +++ + +++G++ +
Sbjct: 63 -IRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMRAMGDEYVSTEHMLIGIVASAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 122 AVADIFKKHNVSADALRKAVPTVRG--GAKVTSPDAEGNYKALEKYSVDMTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVLKE+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 240 SLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EYR+++EKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 300 LKPMLARGELRLVGATTLNEYREHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A++ RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDAAARERLEKLQEELANSREKLAGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E ++ E + PDQ
Sbjct: 480 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESEAANAKSEAKEPMVPDQVDA 539
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 540 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 600 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 660 IGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PLS E+L
Sbjct: 720 LIMTSNLGSQFLVQEGLDDAA---KRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELG 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ VA RL++R ++L V+D+A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 777 GIVDIQVRQVAARLSDRRISLDVSDSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 836
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + + D D++ ++
Sbjct: 837 LLSGKVHDGARLVADCENTSDHVTLKI 863
>gi|419848228|ref|ZP_14371346.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 1-6B]
gi|386408369|gb|EIJ23282.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 1-6B]
Length = 889
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/861 (52%), Positives = 603/861 (70%), Gaps = 35/861 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT EA+ A + A++AG+AQ LH+ ALL +G+ I AGG++ A A
Sbjct: 4 KFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVVRSLIEAAGGDSQAIGA-- 61
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
A+ LPS + + P AS L I +A+ + GD +++ + L++G+ + +
Sbjct: 62 AVRNALVALPSASGSSTSQPQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q ++ ++ GV A ++ V +RG G KV S + +++AL+ Y DL A GKLD
Sbjct: 122 QSAEILEKNGVTAASLRKAVPGVRG--GAKVTSPDAEGSYKALEKYSTDLTAAAKEGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L +LI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQGKKLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL E++ A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 240 SLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 300 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L+RK
Sbjct: 360 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ E+ +++ L+ K
Sbjct: 420 VTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAK 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAI-----------GQLEGNQSDENLML 528
++L + R +LA A+ + YG I ++ + N +DE M+
Sbjct: 480 LDDLRVQADKYTREGNLAEASKILYGEIPSIQKELAAAESADAESADASAANPADEP-MV 538
Query: 529 TETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRS 577
+ V D +AE+VS WTGIPV RL G+NEK +R+IG EA+ AV+++V RS
Sbjct: 539 PDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRS 598
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAG+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLI
Sbjct: 599 RAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLI 658
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GA PGYVG+E+GGQLTEAVRRRPYSVVLFDEVEKA+ +F+ LLQVLDDGRLTDGQGRTV
Sbjct: 659 GAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+NT++IMTSNLG++ L++ M + V+ V +F+PE LNRLD+IV+F PL
Sbjct: 719 DFKNTILIMTSNLGSQFLVNEDM---DADAKKKAVMDAVHMNFKPEFLNRLDDIVMFHPL 775
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ E+L + +Q+ V+ RL +R + L VTD+A + + YDP YGARP+RR ++ +V
Sbjct: 776 TREELGGIVDIQVAGVSQRLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVG 835
Query: 818 TELSRMLVREEIDENSTVYID 838
+L+RML+ ++ + TV +D
Sbjct: 836 DQLARMLLAGKVHDGDTVLVD 856
>gi|415709998|ref|ZP_11463559.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 6420B]
gi|388055692|gb|EIK78584.1| ATP-binding subunit of Clp protease [Gardnerella vaginalis 6420B]
Length = 864
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/867 (51%), Positives = 611/867 (70%), Gaps = 28/867 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT +A++ A + A +AG+AQ LHLA ALL G+ I AG + AE
Sbjct: 4 KFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIGAE- 62
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
A+ LPS T + P AS L+ + +A+ +A GD +++ + +++G++ E +
Sbjct: 63 -IRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMRAMGDEYVSTEHMLIGMVASEPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ D+FK+ V+ ++ V +RG G KV S + ++AL+ Y D+ +A GKLD
Sbjct: 122 AVADIFKKHNVSADVLRKAVPTVRG--GAKVTSPDAEGNYKALEKYSVDMTARAREGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + RLI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+ ++VAG+KYRGEFEERLKAVLKE+++++G++I FIDEIH V+GAG EGSMDA N+
Sbjct: 240 SLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL EYR+++EKD+A ERRFQQV+V EPSV DTV+ILRGLK++YE
Sbjct: 300 LKPMLARGELRLVGATTLNEYREHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D A+V AA LS RYITGR LPDKAIDLVDEA A++R++LDSQPEEID L+RK
Sbjct: 360 AHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D A++ RL ++++EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRLEMEEMQLKKAEDAAARERLEKLQEELANSREKLSGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ--- 536
+ + R +L +A+ + YG I ++ A+ + E ++ E + PDQ
Sbjct: 480 LDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESEAANAKSEAKEPMVPDQVDA 539
Query: 537 --IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
IA VVS WTGIPV RL G+NEK +R++G +EA+ A+A++V RSRAG+
Sbjct: 540 DSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIAD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA PGY
Sbjct: 600 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
+G+EEGGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDF NT+
Sbjct: 660 IGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ + R V+ V F+PE +NRLDE+V+F PLS E+L
Sbjct: 720 LIMTSNLGSQFLVQEGLDDAA---KRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELG 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q++ VA RL++R ++L V+ +A + YDP+YGARP+RR ++ ++ +L+R+
Sbjct: 777 GIVDIQVRQVAARLSDRRISLDVSGSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARL 836
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
L+ ++ + + V D D++ ++
Sbjct: 837 LLSGDVHDGARVVADCENTSDHVTLKI 863
>gi|356551074|ref|XP_003543903.1| PREDICTED: chaperone protein ClpB3, chloroplastic-like [Glycine
max]
Length = 978
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/860 (50%), Positives = 601/860 (69%), Gaps = 32/860 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT +AI A E+A H HL ALL +G+ + + G +N R
Sbjct: 87 EFTEMAWQAIISAPEVAKENKHQIVETEHLMKALLEQKNGLARRIFSKVGVDNT-----R 141
Query: 65 VFNQAMKKLPSQTPAPDEIPASTT---LIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ K + Q E S L +I+RA+ +K +GD+ ++V+ +LG +D
Sbjct: 142 LLEATDKHIQRQPKVVGESAGSMLGRDLEALIQRARDFKKEYGDSFVSVEHFVLGFAQDK 201
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGKL 178
+ G LF++ ++ +KS +E +RG++ + G ++AL+ YG+DL + +AGKL
Sbjct: 202 RFGKILFRDFQISQQALKSAIESIRGRQSVIDQDPEG--KYEALEKYGKDLTAMAKAGKL 259
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L + RL
Sbjct: 260 DPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALMNRRL 319
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAKYRGEFE+RLKAVLKEV E++G+ ILFIDEIH V+GAG + G+MDA N
Sbjct: 320 ISLDMGALIAGAKYRGEFEDRLKAVLKEVTESDGQTILFIDEIHTVVGAGASNGAMDAGN 379
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +PSV DT+SILRGL+E+Y
Sbjct: 380 LLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTISILRGLRERY 439
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDEA A +++++ S+P +D + R
Sbjct: 440 ELHHGVRISDSALVDAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEINR 499
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
++LE+E +L + DKASK RL + EL L++K L +++ EK + ++ +K+
Sbjct: 500 SVLKLEMERLSLMNDTDKASKDRLNRLETELSLLKEKQDELTGQWEHEKSVMTNLQSIKE 559
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG++ +++E+A +L + ML E V
Sbjct: 560 EIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLESAEKELHEYMNSGKSMLREEVTG 619
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
+ IA++VS+WTGIP+++L Q+++ +R++G AV AVAE++ RSRAGL
Sbjct: 620 NDIADIVSKWTGIPISKLQQSDREKLLYLEEELHKRVVGQDPAVKAVAEAIQRSRAGLSD 679
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+F+GPTGVGKTELAKALA LF+ E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 680 PHRPIASFMFMGPTGVGKTELAKALASYLFNTEEALVRIDMSEYMEKHTVSRLIGAPPGY 739
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTE VRRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QGRTV F NTV
Sbjct: 740 VGYEEGGQLTETVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTV 799
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEV----RKHFRPELLNRLDEIVVFDPLSH 759
IIMTSN+G++++L+ V + A + + Q V R FRPE +NR+DE +VF PL
Sbjct: 800 IIMTSNVGSQYILNTDDDTVPKESAYETIKQRVMDAARSIFRPEFMNRVDEYIVFQPLDR 859
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
Q+ + RLQ++ V R+A+R + + VT+AA+ ++ + YDP YGARP++R +++ V E
Sbjct: 860 NQISSIVRLQLERVQKRIADRKMKIQVTEAAIQLLGSLGYDPNYGARPVKRVIQQNVENE 919
Query: 820 LSRMLVREEIDENSTVYIDA 839
L++ ++R E E T+ +D
Sbjct: 920 LAKGILRGEFKEEDTILVDT 939
>gi|384104988|ref|ZP_10005923.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus
imtechensis RKJ300]
gi|383836838|gb|EID76240.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus
imtechensis RKJ300]
Length = 850
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/865 (52%), Positives = 595/865 (68%), Gaps = 38/865 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + A+SAG+ P HL VALL GI A + G +
Sbjct: 4 FNP---TTKTQAAMTAALQSASSAGNPDIRPAHLLVALLDQTDGIAAPLLKAIGVDPTV- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
R + +LP T A + + AQ D +++ + L++GL
Sbjct: 60 -VHREAQDLVDRLPKTTGATTTPQLGREALAALTAAQHLATELDDEYVSTEHLMVGLASG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+S + L K G ++ +RG +V S + T+QAL+ Y DL A GK
Sbjct: 119 ESDVTGLLKRHGATPEALRDAFTTVRGSA--RVTSPDPEGTYQALEKYSTDLTAAARNGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKS 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+I+LD+G++VAGAKYRGEFEERLKAVL +++ + G+VI FIDE+H ++GAG T E +MDA
Sbjct: 237 VISLDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV V EPSV DTV ILRGLKE
Sbjct: 297 GNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEEID++
Sbjct: 357 RYEVHHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDSV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE AL+KE D ASK RL ++R+EL D R+KL L R++ EK+ ID +R +
Sbjct: 417 ERIVRRLEIEEMALQKESDAASKDRLEKLRQELADEREKLNQLTTRWQNEKQAIDSVRGV 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL---EGNQSDENLMLTETVG 533
K++ E L + AER DL RAA+LRYG I ++E + Q G +D ++ML E VG
Sbjct: 477 KEQLETLRGEEERAERDGDLGRAAELRYGRIPQLEKELEQAARESGAAADGDVMLKEEVG 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
PD +A+VV+ WTGIP R+ + E +R++G EAV AV+++V R+RAG+
Sbjct: 537 PDDVADVVAAWTGIPAGRMLEGETAKLLRMESELGKRVVGQEEAVVAVSDAVRRARAGVA 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +PTGSFLFLGPTGVGKTELAK+LA+ LFDDE +VRIDMSEY E+HSV+RL+GAPPG
Sbjct: 597 DPNRPTGSFLFLGPTGVGKTELAKSLADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+E GGQLTEAVRRRPY+VVLFDEVEKAH VF+ LL VLD+GRLTDGQGRTVDFRNT
Sbjct: 657 YVGYEAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLAVLDEGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++I+TSNLGA +R+QV+ VR F+PE +NRLD++V+F+ L+ EQL
Sbjct: 717 ILILTSNLGAGG-------------SREQVMDAVRHAFKPEFINRLDDVVIFESLTEEQL 763
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ ++ RLA R + L V+++A + YDP+YGARP+RR +++ + +L++
Sbjct: 764 ESIVDIQLAQLSRRLAARRLTLDVSESARFWLAVRGYDPMYGARPLRRLIQQAIGDQLAK 823
Query: 823 MLVREEIDENSTVYIDASPKGDNLV 847
+L+ ++ + TV + S GD LV
Sbjct: 824 LLLAGDVKDGDTVPVKVSETGDALV 848
>gi|283786204|ref|YP_003366069.1| chaperone (heat-shock protein F84.1) [Citrobacter rodentium ICC168]
gi|282949658|emb|CBG89277.1| chaperone (heat-shock protein F84.1) [Citrobacter rodentium ICC168]
Length = 857
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/854 (51%), Positives = 592/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S L++V+ + GD ++ + +L LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLADLLKSAGATTASISQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +EL+D + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELNDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV+R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLADPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ VL V +FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYSHMKEMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 KIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ T+ ++A+
Sbjct: 836 GELIPGKTIRLEAN 849
>gi|83855155|ref|ZP_00948685.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Sulfitobacter
sp. NAS-14.1]
gi|83842998|gb|EAP82165.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Sulfitobacter
sp. NAS-14.1]
Length = 871
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/857 (52%), Positives = 596/857 (69%), Gaps = 21/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT ++ I A +AT H + TP HL ALL D G+ + I AGG+ A
Sbjct: 1 MDLSKFTERSRGFIQAAQTIATRESHQRLTPEHLLKALLDDDQGLASNLIAAAGGDPA-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
++ KLP + ++ KV+ A+ K GD+ + V+++++ L
Sbjct: 59 RVTETLTLSLGKLPKVSGDAAQVYLDNATAKVLAEAETLAKKAGDSFVPVERVLMALAMV 118
Query: 121 SQIGDLFKEAGVAVAR-VKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+AG A+ + + + +R +GR ++AS + ++ALK Y DL E+A GK
Sbjct: 119 KSGAKTALDAGKVTAQGLNAAINDIR--KGRTADTASAEDGYEALKKYSLDLTERAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DP+IGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L + R
Sbjct: 177 IDPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVDGDVPESLRNKR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ALDMGAL+AGAKYRGEFEERLKAVL EV EA G+VILFIDE+H ++GAG+ +G+MDAA
Sbjct: 237 LLALDMGALIAGAKYRGEFEERLKAVLTEVTEAAGEVILFIDEMHTLVGAGKADGAMDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L C+GATTL+EYRKYVEKDAA RRFQ V V+EP+V DTVSILRG+KEK
Sbjct: 297 NLIKPALARGELHCVGATTLDEYRKYVEKDAALARRFQPVMVSEPTVEDTVSILRGIKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEE+D L+
Sbjct: 357 YELHHGVRISDSALVAAATLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ MQL+IE AL+KE D ASK RL ++ KEL DL++K + +++ E++R++ R LK
Sbjct: 417 RQIMQLQIEAEALKKEDDAASKDRLDKLEKELGDLQEKADAMTAQWQGERDRLEGARELK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
++ + L+ A+R +LA+A +L YG I ++E +G+ E N++D +M+ E V PDQI
Sbjct: 477 EQLDRARAELEIAKREGNLAKAGELSYGVIPQLERKLGEAEENEAD--VMVEEAVRPDQI 534
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
A VV RWTGIP R+ + E+++L IG AV AV+ +V R+RAGL +
Sbjct: 535 ASVVERWTGIPAGRMLEGERDKLLRMEDQLHNRVIGQNLAVKAVSNAVRRARAGLNDEAR 594
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KA+AE LFDDEN +VRIDMSE+ME+H+V+RLIGAPPGYVG+
Sbjct: 595 PLGSFLFLGPTGVGKTELTKAVAEFLFDDENAMVRIDMSEFMEKHAVARLIGAPPGYVGY 654
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
+EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDG LTDGQGR VDF+ T+I++
Sbjct: 655 DEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRKVDFKQTLIVL 714
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLGA+ L G Q RD V+ VR HFRPE LNRLDE V+FD L+ + +
Sbjct: 715 TSNLGAQALSQLPEGGDMAQAKRD-VMDAVRAHFRPEFLNRLDETVIFDRLARADMAGIV 773
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q+ + RLA R + L + + A + E YDP++GARP++R +++ + L+ M++
Sbjct: 774 DIQVNRLLKRLAGRKIGLELDEGARKWLADEGYDPVFGARPLKRVIQRALQDPLAEMILA 833
Query: 827 EEIDENSTVYIDASPKG 843
++ + + + A +G
Sbjct: 834 GDVLDGDLIPVHAGAEG 850
>gi|83592092|ref|YP_425844.1| chaperone clpB [Rhodospirillum rubrum ATCC 11170]
gi|386348791|ref|YP_006047039.1| chaperone clpB [Rhodospirillum rubrum F11]
gi|83575006|gb|ABC21557.1| Chaperone clpB [Rhodospirillum rubrum ATCC 11170]
gi|346717227|gb|AEO47242.1| chaperone clpB [Rhodospirillum rubrum F11]
Length = 870
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/856 (52%), Positives = 594/856 (69%), Gaps = 25/856 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P+K T ++ + A +A H Q TP HL ALL D G+ A I AGG+
Sbjct: 1 MDPEKLTDRSKGFLQAAQTIALRETHQQVTPEHLLKALLDDKEGLAANLIRAAGGD--PL 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A+ N+ + KLP + ++ + +L +VI +A + GD+ + V++L+ L +
Sbjct: 59 RAQEAVNREVDKLP-KVQGAQQMYWAQSLARVIDQATRMAEKAGDSFVTVERLLIALAMA 117
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
++ + EAG + VE LR +GRK +SA ++ + ALK Y RDL E A G
Sbjct: 118 AETPAKRILAEAGATPQGLNKAVEDLR--KGRKADSAGAESQYDALKKYARDLTEAAREG 175
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA++EGLA RIV GDVP +L +
Sbjct: 176 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIIEGLALRIVNGDVPESLQNK 235
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALD+GA+VAGAK+RGEFEERLKA+L EV AEG++ILFIDE+H ++GAG EG+MDA
Sbjct: 236 KLMALDLGAMVAGAKFRGEFEERLKAMLTEVSAAEGEIILFIDEMHTLIGAGAGEGAMDA 295
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG L C+GATTL EYRK+VEKDAA RRFQ V+V+EP V DT+SILRG+KE
Sbjct: 296 SNLLKPALARGDLHCVGATTLNEYRKHVEKDAALARRFQPVFVSEPGVADTISILRGIKE 355
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+++DS+PE +D L
Sbjct: 356 KYELHHGVRIADNALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEALDEL 415
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL KEKD AS+ARL ++ KEL DL + L +K+EKE + R+
Sbjct: 416 DRRIIQLKIEREALRKEKDIASEARLSDLEKELADLESQSATLTEDWKREKEGLAGSTRI 475
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQS----DENLMLTETV 532
K++ E+ L A+R+ + ARA +L YG I ++E +G++E ++ E V
Sbjct: 476 KEQLEQARGDLDIAKRQANWARAGELEYGVIPDLERRLGEVESGDGLAHRQGGKLVNEVV 535
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGL 581
+ IA VVSRWTGIPV ++ E+E+L+G+ EAV AV+ +V RSRAGL
Sbjct: 536 TAETIASVVSRWTGIPVDKMLAGEREKLLGMEKVLASRVVGQREAVVAVSNAVRRSRAGL 595
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTEL KALA LFDDE +VRIDMSEYME+H+VSRLIGAPP
Sbjct: 596 QDPNRPMGSFLFLGPTGVGKTELTKALAAFLFDDEQAMVRIDMSEYMEKHAVSRLIGAPP 655
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRN
Sbjct: 656 GYVGYDEGGALTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRN 715
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+I++TSNLGA+ L + G + V R V++ VR FRPE LNRLDEI++F L E
Sbjct: 716 TLIVLTSNLGADILANQPEGDDSGAV-RGAVMEMVRAAFRPEFLNRLDEILLFHRLFREN 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + +Q+ +A RL +R + L + DAA D + YDP+YGARP++R +++ + L+
Sbjct: 775 MAGIVSIQLGRLADRLRDRKMTLDLDDAARDWLAERGYDPVYGARPLKRVIQRSLENPLA 834
Query: 822 RMLVREEIDENSTVYI 837
+++ I + + I
Sbjct: 835 TLVLDGRIKDGDVIRI 850
>gi|227873062|ref|ZP_03991357.1| S14 family endopeptidase ClpB [Oribacterium sinus F0268]
gi|227841137|gb|EEJ51472.1| S14 family endopeptidase ClpB [Oribacterium sinus F0268]
Length = 861
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/870 (50%), Positives = 606/870 (69%), Gaps = 37/870 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN ++FT K+ E+I + ++A G+ LH+ +LL + + + E +
Sbjct: 1 MNINRFTQKSVESINNSQKIALDHGNQAIEQLHILYSLLDIEDSLIEKLLEKM--EVPVE 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+R + + LP + KV+ A+ KA GD +++V+ L L LL+D
Sbjct: 59 DFKRALEEKINSLPKVSGGQQYFSQDAN--KVMMNAEDHAKAMGDEYVSVEHLFLALLKD 116
Query: 121 --SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+I +LFKE + + +RG +KV + + + T+ +L YG ++VE+A
Sbjct: 117 GDKKIQELFKEFHITKDGFLQALSSVRG--NQKVVTDNPEGTYDSLNKYGYEMVERARQQ 174
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K DP+IGRDEEIR ++RILSR+ KNNP LIGEPGVGKTA VEGLAQRI + DVP +L
Sbjct: 175 KFDPIIGRDEEIRNIIRILSRKQKNNPCLIGEPGVGKTAAVEGLAQRIAKEDVPDSLKKK 234
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
++ ALDMGAL+AGAKYRGEFEERLKAVL EV+++EG+++LFIDEIH ++GAG+TEGSMDA
Sbjct: 235 KIFALDMGALIAGAKYRGEFEERLKAVLDEVKKSEGEILLFIDEIHNIVGAGKTEGSMDA 294
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EP V DT+SILRG+KE
Sbjct: 295 GNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVMVDEPDVEDTISILRGIKE 354
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE +HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ ++DS PEE+D +
Sbjct: 355 RYEVYHGVKITDSALVAAATLSDRYISDRFLPDKAIDLVDEACAMIKTEMDSMPEEMDEM 414
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL+KE+D+ SK RL ++KEL +LRD+ +++ E+ + ++ L
Sbjct: 415 QRRILQLQIEELALKKEEDQLSKERLATLQKELSNLRDEFNVQKAQWENERNAVSNLQTL 474
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLMLTETVGP 534
++K++++ + A++ YD + A L+Y + +VE + + E + ++ + V
Sbjct: 475 REKKDKIQSEMNIAKQNYDYEKVAKLQYQDLPQVERELQEAEELAQSKEAQGLVHDKVTE 534
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IA+++SRWTGIPVT+L ++E+ +RLIG EAV V E++LRS+AG+
Sbjct: 535 EEIAKIISRWTGIPVTKLNESERSKVLHLDDEIHKRLIGQEEAVTKVTEAILRSKAGIKD 594
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTELAK+LA+ LFDDEN +VRIDMSEYME++SVSRLIGA PGY
Sbjct: 595 PTKPIGSFLFLGPTGVGKTELAKSLAQNLFDDENAMVRIDMSEYMEKYSVSRLIGAAPGY 654
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRR+PY+VVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT+
Sbjct: 655 VGYEEGGQLTEAVRRKPYAVVLFDEIEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTI 714
Query: 704 IIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
II+TSN+GA+ LL G+ G + V R +V++ + HFRPE LNRLDEI++F PL +
Sbjct: 715 IILTSNIGAQTLLDGISENGDIPENV-RKEVMEALHDHFRPEFLNRLDEIILFKPLVQKD 773
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ ++A L +KD+ RL ER + + + ALD +L +Y+P +GARP++R+++K V T
Sbjct: 774 MERIADLILKDINKRLQERRLHIHLQKEALDFILENAYEPGFGARPLKRYMQKHVET--- 830
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
LV +EI E D +GDN+ R+Q
Sbjct: 831 --LVAKEILE------DRVKEGDNIEIRLQ 852
>gi|387888298|ref|YP_006318596.1| ATP-dependent chaperone protein ClpB [Escherichia blattae DSM 4481]
gi|414595937|ref|ZP_11445541.1| chaperone protein ClpB [Escherichia blattae NBRC 105725]
gi|386923131|gb|AFJ46085.1| ATP-dependent chaperone protein ClpB [Escherichia blattae DSM 4481]
gi|403193094|dbj|GAB83193.1| chaperone protein ClpB [Escherichia blattae NBRC 105725]
Length = 858
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/849 (51%), Positives = 591/849 (69%), Gaps = 19/849 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K +A+A A LA + PLHL ALLS G A + AG N Q
Sbjct: 1 MRLDRLTNKFQQALADAQSLALGHDNQYIEPLHLMSALLSQEGGSVAPLLTTAG-VNVGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
++A+K+LP ++ S L++ + + GD ++ + +L LE
Sbjct: 60 -LRTAIDEALKRLPQVEGTGGDVQPSQDLVRALNLCDKLAQKQGDNFISSELFVLAALET 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG+ A V +E+LRG G V + + QALK + DL E+A GK
Sbjct: 119 RGSLADLLKNAGLTTANVTQAIEQLRG--GESVNDQNAEDQRQALKKFTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRIV G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +EL D + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALRKEADEASKKRLDMLEEELADKERQYSVLEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRNGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV+R+ ++E+++L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVSRMMESERDKLLRMEEQLHDRVIGQNEAVEAVSNAIRRSRAGLADPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ ++RIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ +D VL+ V +FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELNYGSMKDLVLEVVSHNFRPEFINRIDEVVVFHPLGQQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG ++ ++ AL+++ +DP+YGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYSVHISAEALNLLSENGFDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTV 835
E+ T+
Sbjct: 836 GELVPGKTI 844
>gi|83941677|ref|ZP_00954139.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Sulfitobacter
sp. EE-36]
gi|83847497|gb|EAP85372.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Sulfitobacter
sp. EE-36]
Length = 871
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/857 (52%), Positives = 596/857 (69%), Gaps = 21/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT ++ I A +AT H + TP HL ALL D G+ + I AGG+ A
Sbjct: 1 MDLSKFTERSRGFIHAAQTIATRESHQRLTPEHLLKALLDDDQGLASNLIAAAGGDPA-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
++ KLP + ++ KV+ A+ K GD+ + V+++++ L
Sbjct: 59 RVTETLTLSLGKLPKVSGDAAQVYLDNATAKVLAEAETLAKKAGDSFVPVERVLMALAMV 118
Query: 121 SQIGDLFKEAGVAVAR-VKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+AG A+ + + + +R +GR ++AS + ++ALK Y DL E+A GK
Sbjct: 119 KSGAKTALDAGKVTAQGLNAAINDIR--KGRTADTASAEDGYEALKKYSLDLTERAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DP+IGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L + R
Sbjct: 177 IDPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVDGDVPESLRNKR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ALDMGAL+AGAKYRGEFEERLKAVL EV EA G+VILFIDE+H ++GAG+ +G+MDAA
Sbjct: 237 LLALDMGALIAGAKYRGEFEERLKAVLTEVTEAAGEVILFIDEMHTLVGAGKADGAMDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L C+GATTL+EYRKYVEKDAA RRFQ V V+EP+V DTVSILRG+KEK
Sbjct: 297 NLIKPALARGELHCVGATTLDEYRKYVEKDAALARRFQPVMVSEPTVEDTVSILRGIKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEE+D L+
Sbjct: 357 YELHHGVRISDSALVAAATLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ MQL+IE AL+KE D ASK RL ++ KEL DL++K + +++ E++R++ R LK
Sbjct: 417 RQIMQLQIEAEALKKEDDAASKDRLDKLEKELGDLQEKADAMTAQWQGERDRLEGARELK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
++ + L+ A+R +LA+A +L YG I ++E +G+ E N++D +M+ E V PDQI
Sbjct: 477 EQLDRARAELEIAKREGNLAKAGELSYGVIPQLERKLGEAEENEAD--VMVEEAVRPDQI 534
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
A VV RWTGIP R+ + E+++L IG AV AV+ +V R+RAGL +
Sbjct: 535 ASVVERWTGIPAGRMLEGERDKLLRMEDQLHNRVIGQNLAVKAVSNAVRRARAGLNDEAR 594
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KA+AE LFDDEN +VRIDMSE+ME+H+V+RLIGAPPGYVG+
Sbjct: 595 PLGSFLFLGPTGVGKTELTKAVAEFLFDDENAMVRIDMSEFMEKHAVARLIGAPPGYVGY 654
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
+EGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDG LTDGQGR VDF+ T+I++
Sbjct: 655 DEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRKVDFKQTLIVL 714
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLGA+ L G Q RD V+ VR HFRPE LNRLDE V+FD L+ + +
Sbjct: 715 TSNLGAQALSQLPEGGDMAQAKRD-VMDAVRAHFRPEFLNRLDETVIFDRLARADMAGIV 773
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q+ + RLA R + L + + A + E YDP++GARP++R +++ + L+ M++
Sbjct: 774 DIQVNRLLKRLAGRKIGLELDEGARKWLADEGYDPVFGARPLKRVIQRALQDPLAEMILA 833
Query: 827 EEIDENSTVYIDASPKG 843
++ + + + A +G
Sbjct: 834 GDVLDGDLIPVQAGAEG 850
>gi|365839294|ref|ZP_09380539.1| ATP-dependent chaperone protein ClpB [Anaeroglobus geminatus F0357]
gi|364565322|gb|EHM43054.1| ATP-dependent chaperone protein ClpB [Anaeroglobus geminatus F0357]
Length = 875
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/855 (50%), Positives = 602/855 (70%), Gaps = 28/855 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M +K+T K E A +LA + + T +H+ + L DP G+ A + G +
Sbjct: 17 MGNEKYTQKVMEVFQEAQQLAALHYNQEITSVHMMLGLTKDPEGLLATIFEDCGTDLPML 76
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
A+ Q +KK+PS + ST +++I +AQ +A D +++ + L+LG++E
Sbjct: 77 RAK--LEQMLKKIPS-VQGQSSLSMSTEAVRIIGKAQQRAEAMHDDYISTEHLLLGVIEA 133
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
D ++ D+ ++ G+ +V + ++ R + V S + + ++AL+ YGRDL A G
Sbjct: 134 GDREMQDVCRQFGLHADKVLNAIKTNRKQ---SVSSDNPEGNYKALEKYGRDLTAAARKG 190
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR + ILSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP +L +
Sbjct: 191 KLDPVIGRDDEIRRTIEILSRRTKNNPVLIGEPGVGKTAIVEGLASRIIAGDVPESLKNK 250
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
L +LDMG+L+AGAKYRGEFEERLKAVL E+ ++EG+++LFIDEIH V+GAG +EGSMDA
Sbjct: 251 TLYSLDMGSLIAGAKYRGEFEERLKAVLTEISKSEGRILLFIDEIHTVVGAGASEGSMDA 310
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KPMLARG+LRCIGATTL EY+KY+EKDAA ERRFQ V V +PSV DT++ILRGLKE
Sbjct: 311 SNLLKPMLARGELRCIGATTLNEYQKYIEKDAALERRFQPVMVDQPSVEDTITILRGLKE 370
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI+D A+V AA LS RYI+ R LPDKAIDLVDEA A +R +++S P +D +
Sbjct: 371 RYEVHHGVRIRDNAMVAAAVLSDRYISDRFLPDKAIDLVDEAAAKLRTEIESMPAPLDEI 430
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
K MQLEIE +L KE D+ASK RL ++ +L+ + + L R+ KEK+ I + L
Sbjct: 431 RHKIMQLEIEEQSLNKETDEASKERLAKIVDNKKELQAEEKELQARWDKEKQAILRTQAL 490
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE--NLMLTETVGP 534
K++ +++ +++AER YDL +A++L+YG + E++ + + E + S E + +L E VG
Sbjct: 491 KRELDDVRHQMEKAEREYDLTKASELKYGKLPELQHQLAEQEESLSKESDSHLLKEEVGE 550
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
+ IA+VVSRWTGIPVT++ E+E+L +G EAV V+++++R+RAG+
Sbjct: 551 EDIAQVVSRWTGIPVTKMMTGEREKLLHLDDTLHKRVVGQDEAVQVVSDAIIRARAGIKD 610
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSF+FLGPTGVGKTELAKALAE LFDDE +VRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 611 PNRPIGSFIFLGPTGVGKTELAKALAESLFDDERNIVRIDMSEYMEKHTVSRLIGAPPGY 670
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRR PYSV+L DE+EKAH +FN LLQ+LDDGRLTDG+GR V+F+NTV
Sbjct: 671 VGYDEGGQLTEAVRRHPYSVILLDEIEKAHPDIFNVLLQILDDGRLTDGKGRVVNFKNTV 730
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSNLG+ +L + A QV ++ +FRPE LNR+D+IVVF L EQ+
Sbjct: 731 IIMTSNLGSHEILE----TGNFEDAEKQVKDILKNYFRPEFLNRIDDIVVFKGLKREQVL 786
Query: 764 KVARLQMKDVAIRLAER-GVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+AR+ +++++ RL ++ + L TD AL + + Y+P +GARP+RR + V T LSR
Sbjct: 787 DIARILLRNLSNRLQKQMNITLTWTDEALRALSEKGYEPQFGARPLRRLITHTVETALSR 846
Query: 823 MLVREEIDENSTVYI 837
++ ++ E +V I
Sbjct: 847 SIISGDVQEGQSVSI 861
>gi|218297177|ref|ZP_03497839.1| ATP-dependent chaperone ClpB [Thermus aquaticus Y51MC23]
gi|218242454|gb|EED08993.1| ATP-dependent chaperone ClpB [Thermus aquaticus Y51MC23]
Length = 854
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/857 (52%), Positives = 598/857 (69%), Gaps = 28/857 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +++T EA+A A LA H HL LL DP G+ + + AG + +
Sbjct: 1 MNLERWTQAAREALAQAQVLARKLQHQAIDTPHLWAVLLRDPGGLPWRLLEKAGAD--PK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ + + + + +LP A + L V RA+A + D +A+D L+L L E
Sbjct: 59 ALKELMERELSRLPKVEGAEGGQYLTARLSGVFNRAEALMEELKDRFVALDTLVLALAEA 118
Query: 121 SQIGDLFKEAGV-AVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ G+ + +K + +LRG G+ V++ ++T+ AL+ YG DL A GK
Sbjct: 119 T--------PGLPGLEPLKRALLELRG--GKTVQTEHAESTYNALEQYGIDLTALAAQGK 168
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR ++IL RRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L R
Sbjct: 169 LDPVIGRDEEIRRTIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKR 228
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+I+L MG+L+AGAKYRGEFEERLKAV++EV ++G++ILFIDEIH V+GAG+ EG++DA
Sbjct: 229 IISLQMGSLLAGAKYRGEFEERLKAVIQEVVASQGEIILFIDEIHTVVGAGKAEGAVDAG 288
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+LR IGATTL+EYR+ +EKD A ERRFQ VYV EPSV DT+SILRG+KEK
Sbjct: 289 NMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVEEPSVEDTISILRGIKEK 347
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA A +R+ L+S PEEID LE
Sbjct: 348 YEVHHGVRISDPALVAAAVLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDTLE 407
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK++QLEIE AL+KEKD S RL + E+ +L +++ L ++ E+E + ++R +
Sbjct: 408 RKKLQLEIEREALKKEKDPDSLERLKAIEAEIAELTKEIEKLKAEWEAEREILKKLREAQ 467
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ +E+ ++ AER YDL RAA+LRYG + +EA + L + + E D I
Sbjct: 468 HRLDEVRREIELAERHYDLNRAAELRYGELPRLEAEVEALSEKLKNARFVRLEVTEED-I 526
Query: 538 AEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
AE+VSRWTGIPV +L + E +R++G EA+ AVA+++ R+RAGL P +
Sbjct: 527 AEIVSRWTGIPVAKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNR 586
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTELAK LA LFD E +VRIDM+EYME+H+VSRLIGAPPGYVG+
Sbjct: 587 PIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMVRIDMTEYMEKHAVSRLIGAPPGYVGY 646
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTD GRTVDFRNTVII+
Sbjct: 647 EEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIIL 706
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG+ +L G+ + + RD+V ++KHFRPE LNRLDEIVVF PLS EQ+R++
Sbjct: 707 TSNLGSPLILEGIQKGLPYERIRDEVFGVLQKHFRPEFLNRLDEIVVFRPLSREQIRQIV 766
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q+ ++ RL+E+ + L +++AA D + YDP++GARP++R +++++ T L++ ++
Sbjct: 767 DIQLANLRARLSEKRITLELSEAAKDFLAQRGYDPVFGARPLKRVIQRELETPLAKKILA 826
Query: 827 EEIDENSTVYIDASPKG 843
EI E V +D +G
Sbjct: 827 GEIKEGDRVLVDVGLEG 843
>gi|152968159|ref|YP_001363943.1| ATPase AAA [Kineococcus radiotolerans SRS30216]
gi|151362676|gb|ABS05679.1| ATPase AAA-2 domain protein [Kineococcus radiotolerans SRS30216]
Length = 878
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/854 (52%), Positives = 600/854 (70%), Gaps = 25/854 (2%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
K T + EA+A A ATSAGHAQ PLH+ ALL +G+ + G + A + R
Sbjct: 4 KLTTRAQEALADAVGRATSAGHAQVEPLHVLAALLGQDNGVAGHLLAALGADQALLT--R 61
Query: 65 VFNQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQI 123
+ A+ LPS + + P S +++++ A +A D +++ + L+LG
Sbjct: 62 RIDGALSSLPSASGSNVSQPQLSRPALQLMQAAGDEARALDDAYVSTEHLLLGAAASPSA 121
Query: 124 GDL-FKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDP 180
+ G + + +RG G KV S + T+++L+ YG DL EQA G+LDP
Sbjct: 122 AGEALRAVGATRDALLDSLPTVRG--GAKVTSPDPEGTYRSLEKYGVDLTEQARQGRLDP 179
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP +L RLI+
Sbjct: 180 VIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPESLRGKRLIS 239
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LD+ ++VAGAKYRGEFEERLKAVL+E+++++G+V+ FIDE+H V+GAG EG+MDA N+
Sbjct: 240 LDLASMVAGAKYRGEFEERLKAVLQEIQDSDGQVVTFIDELHTVVGAGAGEGAMDAGNML 299
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARGQLR +GATTL+EYR+ +EKD A ERRFQQV+V EPSVPDT+ ILRGL+E+YE
Sbjct: 300 KPMLARGQLRLVGATTLDEYRERIEKDPALERRFQQVFVGEPSVPDTIGILRGLRERYEA 359
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA + +R+++DS P EID L R
Sbjct: 360 HHKVAISDAALVAAATLSDRYISGRQLPDKAIDLVDEAASRLRMEIDSSPVEIDELRRAV 419
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
++ +E AL KE+D AS+ RL +R +L D +++L L R+++EK ++ + LK +
Sbjct: 420 DRMRMEELALSKEEDAASRNRLETLRAQLADKQEQLTALTARWEQEKAGLNRVGDLKHQV 479
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTETVGPDQI 537
+EL + +R DL RA+++ YG I +EA + Q + + D + M+ + VGPD I
Sbjct: 480 DELRSQAERLQREGDLGRASEILYGRIPALEAELRQAQAAEQDAPAQAPMVADEVGPDDI 539
Query: 538 AEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++ WTGIP R+ + E E RLIG AV AV+++V RSRAG+ P +
Sbjct: 540 AEVIAGWTGIPAGRILEGETEKLLRMEEFLGARLIGQTTAVQAVSDAVRRSRAGVNDPDR 599
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEY E+H+V+RL+GAPPGYVG+
Sbjct: 600 PTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYSEKHAVARLVGAPPGYVGY 659
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTEAVRRRPYSVVL DEVEKAH VF+ LLQVLDDGRLTDGQGRTVDFRN ++++
Sbjct: 660 EEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVILVL 719
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG+++L+ + + T D V+ VR +F+PE LNRLD++VVFDPLS ++L ++
Sbjct: 720 TSNLGSQYLVDPELSQATKH---DAVMTAVRANFKPEFLNRLDDVVVFDPLSTQELSRIV 776
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q++ +A RLA+R L V+DAA D + YDP YGARP+RR +++++ +L+R ++
Sbjct: 777 EIQVQRLADRLADRRFVLDVSDAAKDWLALTGYDPAYGARPLRRLVQREIGDKLARAILS 836
Query: 827 EEIDENSTVYIDAS 840
E+ + TV +D +
Sbjct: 837 GEVRDGDTVEVDVA 850
>gi|168022328|ref|XP_001763692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685185|gb|EDQ71582.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 915
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/871 (50%), Positives = 611/871 (70%), Gaps = 38/871 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
+N +FT +AI + ++A HL ALL +G+ + + AG +N +
Sbjct: 9 INQGEFTEMAWQAIVASPDVAKENKQQIVETEHLMKALLEQRNGLARRIFSKAGVDNTSL 68
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q+ ER F Q K+ T L +I +A+ +K +GD+ ++V+ L+L
Sbjct: 69 LQATER-FIQRQPKVLGDTSGS---MLGRDLEGLIEKARGHRKDYGDSFVSVEHLVLAFT 124
Query: 119 EDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D + G L+K+ ++ + + ++ +RG + KV + ++AL+ YG+DL E A
Sbjct: 125 QDKRFGQQLYKDFQLSAKTLNAAIQSIRGSQ--KVTDQDPEGRYEALEKYGKDLTEMARQ 182
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVPS L +
Sbjct: 183 GKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPSALLN 242
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LI+LDMG+L+AGAKYRGEFE+RLKAVLKEV +++G++ILFIDEIH V+GAG T G+MD
Sbjct: 243 RKLISLDMGSLIAGAKYRGEFEDRLKAVLKEVTDSDGQIILFIDEIHTVVGAGATSGAMD 302
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +PSV DTVSILRGL+
Sbjct: 303 AGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTVSILRGLR 362
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV +A L+ RYI R LPDKAIDLVDEA A +++++ S+P +D
Sbjct: 363 ERYELHHGVRISDSALVESAMLADRYIADRFLPDKAIDLVDEAAAKLKMEITSKPTALDE 422
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R ++LE+E +L+ + DKAS+ RL + ELD L+ + + L +++ EK + I+
Sbjct: 423 IDRSVLKLEMERLSLKSDTDKASRDRLDRLVTELDLLKQRQKELTDQWEHEKSVMTRIQS 482
Query: 476 LKQKR------EELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDEN 525
+K++ + + +Q+AER YDL RAA+L+YG++ +++EAA L+ Q+ N
Sbjct: 483 IKEEASIQLNVDRVNLEIQQAERDYDLNRAAELKYGSLTTLQRQLEAAEKALDEYQNSGN 542
Query: 526 LMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAESV 574
ML E V + IAEVVS+WTGIP+++L Q+EKE+L+ L + AV +VAE++
Sbjct: 543 SMLREEVTGNDIAEVVSKWTGIPISKLQQSEKEKLLHLDDELHKRVVGQDPAVKSVAEAI 602
Query: 575 LRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVS 634
RSRAGL P +P SF+F+GPTGVGKTELAKALA LF+ E +VRIDMSEYME+H+VS
Sbjct: 603 QRSRAGLSDPNKPIASFMFMGPTGVGKTELAKALASYLFNTEEAIVRIDMSEYMEKHAVS 662
Query: 635 RLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQG 694
RL+GAPPGYVG+EEGGQLTEAVRRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QG
Sbjct: 663 RLVGAPPGYVGYEEGGQLTEAVRRRPYAVILFDEIEKAHSDVFNIFLQILDDGRVTDSQG 722
Query: 695 RTVDFRNTVIIMTSNLGAEHLL------SGMMGKVTMQVARDQVLQEVRKHFRPELLNRL 748
RTV F NTVIIMTSN+G++++L +G +V + R +V++ R FRPE +NR+
Sbjct: 723 RTVSFTNTVIIMTSNVGSQYVLNSADSIAGNNKEVVYEAMRARVMEAARNTFRPEFMNRI 782
Query: 749 DEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPI 808
DE +VF L +Q+ ++ +LQ+ V RL ++ + L VT++A+ ++ + YDP YGARP+
Sbjct: 783 DEYIVFQQLDRDQISRIVKLQLDRVQKRLMDKKITLKVTESAVQLLASLGYDPNYGARPV 842
Query: 809 RRWLEKKVVTELSRMLVREEIDENSTVYIDA 839
+R +++ V EL+R ++R + E TV +D
Sbjct: 843 KRVIQQSVENELARSILRGDFTEEDTVLVDT 873
>gi|103485900|ref|YP_615461.1| ATPase [Sphingopyxis alaskensis RB2256]
gi|98975977|gb|ABF52128.1| ATPase AAA-2 [Sphingopyxis alaskensis RB2256]
Length = 862
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/860 (51%), Positives = 601/860 (69%), Gaps = 24/860 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + + A +A H + TP+H+ ALL D G+ AQ I AGG A
Sbjct: 1 MNLEKFTDRAKGFLQSAQTVAVRMSHQRITPVHILKALLEDEEGMAAQLIQRAGGSPPAA 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPAS--TTLIKVIRRAQAAQKAHGDTHLAVDQLI--LG 116
E +A+ K P+ + + + P + +++ +A+ K GD+ + V +++ +
Sbjct: 61 IGE--VEKALHKFPAVSGSGAQTPPALDNDSARLLDQAEQLAKKAGDSFVPVQRILQAMA 118
Query: 117 LLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
L + + G + AGV +++ ++++ G GR +SAS + ++ ALK Y RDL + A
Sbjct: 119 LSDSTDAGKALQAAGVNAKSLEAVIQEVTG--GRTADSASAEESYDALKKYARDLTQAAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRR ++IL+RRTKNNPVLIG+PGVGKTA+ EGLA RI GDVP +L
Sbjct: 177 DGKLDPVIGRDEEIRRTIQILARRTKNNPVLIGDPGVGKTAIAEGLALRIANGDVPDSLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
L+ALDMGAL+AGAKYRGEFEERLKAV+ EV+ ++G++ILFIDE+H ++GAG +EGSM
Sbjct: 237 GRTLMALDMGALIAGAKYRGEFEERLKAVIDEVKNSDGQIILFIDEMHTLIGAGASEGSM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA+NL KP L+RG+L IGATTL+EY+KYVEKDAA +RRFQ VY+ EPSV DT+SILRGL
Sbjct: 297 DASNLLKPALSRGELHVIGATTLDEYQKYVEKDAALQRRFQPVYIDEPSVEDTISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KEKYE HHGV I D A+V AAQLS RYI R LPDKAIDL+DEA + +R++++S+PEEI+
Sbjct: 357 KEKYELHHGVNITDSAIVAAAQLSDRYIQNRFLPDKAIDLMDEAASRIRMEVESKPEEIE 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
NL+R+ +QL+IE AL KE D+ASK RL +RKEL +L K L R++ E+++I
Sbjct: 417 NLDRRIIQLKIEESALAKESDEASKDRLATLRKELAELEQKSSELTTRWQNERDKIQAEA 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
++K++ + L++A+R DL +A +L YG I +E + + G ++E +L E V
Sbjct: 477 KIKEQLDLARLELEQAQRAGDLQKAGELSYGTIPSLEKQLEEARG--ANETALLREEVTE 534
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
+ IA VVSRWTG+PV ++ + E+E+L IG +AV AV+++V R+RAGL
Sbjct: 535 EDIASVVSRWTGVPVDKMMEGEREKLLKMEEFLGRRVIGQQQAVQAVSKAVRRARAGLQD 594
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL KALAE +F DE +VRIDMSE+ME+H+V+RLIGAPPGY
Sbjct: 595 PNRPLGSFLFLGPTGVGKTELTKALAEFMFGDERAMVRIDMSEFMEKHAVARLIGAPPGY 654
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGR VDF NT+
Sbjct: 655 VGYEEGGVLTEAVRRRPYQVVLFDEVEKAHQDVFNVLLQVLDDGRLTDGQGRVVDFSNTL 714
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
II+TSNLG++ LS + ++ QV+ VR HFRPE LNRLDEI++F LS E +
Sbjct: 715 IILTSNLGSQ-FLSNLTDDQKVEDVEPQVMDVVRSHFRPEFLNRLDEIILFHRLSQEHMA 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q+K V L +R + L +T+ A + + YDP+YGARP++R +++ + L+
Sbjct: 774 PIVDIQVKRVQKLLKDRKITLDLTEGARNWLGRVGYDPVYGARPLKRAVQRYLQDPLAEK 833
Query: 824 LVREEIDENSTVYIDASPKG 843
L+ EI + STV +D +G
Sbjct: 834 LLAGEILDGSTVKVDEGEEG 853
>gi|404447396|ref|ZP_11012462.1| ATPase [Mycobacterium vaccae ATCC 25954]
gi|403648955|gb|EJZ04421.1| ATPase [Mycobacterium vaccae ATCC 25954]
Length = 848
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/863 (52%), Positives = 601/863 (69%), Gaps = 36/863 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + AT+AG+ Q TP HL +ALL+ GI + G +
Sbjct: 4 FNP---TTKTQAALTSALQAATTAGNPQITPAHLLMALLTQNDGIAGPLLEAVGVDPGTV 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
E + + +LP+ + + + + I I A D +++ + L++GL
Sbjct: 61 RTET--QRLLDRLPTVSGSSTQPQLAPQAIAAITAATHLATEMADEYVSTEHLLVGLATG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
D+ L G + ++ K+RG +V S + T+QAL+ Y DL +A GK
Sbjct: 119 DADTAKLLTGHGASPQALREAFVKVRGSA--RVTSPDPEGTYQALEKYSTDLTARAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D
Sbjct: 177 LDPVIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
+++LD+G++VAGAKYRGEFEERLKAVL +++ + G++I FIDE+H ++GAG T E +MDA
Sbjct: 237 VVSLDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGESAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRKY+EKDAA ERRFQQV V EPSV DTV ILRGLKE
Sbjct: 297 GNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+P EID +
Sbjct: 357 RYEVHHGVRITDSALVSAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE ALEKE+D ASK RL ++R EL D ++KL L R++ EK ID +R L
Sbjct: 417 ERLVRRLEIEEMALEKEEDAASKERLEKLRSELADQKEKLSELTTRWQNEKNAIDIVREL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLEGNQSDENLMLTETVGPD 535
K + E+L A AER DLA+AA+LRYG I EVE + + Q+ E++ML E VGPD
Sbjct: 477 KGQLEDLRGAADRAERDGDLAKAAELRYGRIPEVEKKLDAAIPTAQAQEDVMLKEEVGPD 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVS WTGIP R+ + E +R++G +AV AV+++V R+RAG+ P
Sbjct: 537 DIADVVSAWTGIPAGRMLEGETAKLLRMEDELGKRVVGQRKAVQAVSDAVRRARAGVADP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+PTGSF+FLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RL+GAPPGY+
Sbjct: 597 NRPTGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYI 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+++GGQLTEAVRRRPY+V+LFDE+EKAH VF+ LLQVLD+GRLTDGQGRTVDFRNT++
Sbjct: 657 GYDQGGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTIL 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSNLGA + +QV+ VR F+PE +NRLD++++FD L+ E+L
Sbjct: 717 ILTSNLGAGG-------------SEEQVMAAVRSAFKPEFINRLDDVIIFDGLNPEELVS 763
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q++ + RLA+R + L V+ A + +DP+YGARP+RR +++ + +L+R+L
Sbjct: 764 IVDIQLQQLQKRLAQRRLHLEVSQPAKKWLAERGFDPLYGARPLRRLVQQAIGDQLARLL 823
Query: 825 VREEIDENSTVYIDASPKGDNLV 847
+ ++ + V ++ SP GD LV
Sbjct: 824 LAGDVHDGDVVPVNVSPDGDKLV 846
>gi|55981456|ref|YP_144753.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Thermus
thermophilus HB8]
gi|66774200|sp|Q9RA63.2|CLPB_THET8 RecName: Full=Chaperone protein ClpB
gi|55772869|dbj|BAD71310.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Thermus
thermophilus HB8]
Length = 854
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/864 (52%), Positives = 608/864 (70%), Gaps = 30/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +++T EA+A A LA H HL LL D + + + AG + A
Sbjct: 1 MNLERWTQAAREALAQAQVLAQRMKHQAIDLPHLWAVLLKDERSLAWRLLEKAGADPKA- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ + + + +LP A ++ L + RA+A + D ++AVD L+L L E
Sbjct: 60 -LKELQERELARLPKVEGAEVGQYLTSRLSGALNRAEALMEELKDRYVAVDTLVLALAEA 118
Query: 121 SQIGDLFKEAGV-AVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ G+ + +K +++LRG GR V++ ++T+ AL+ YG DL A GK
Sbjct: 119 T--------PGLPGLEALKGALKELRG--GRTVQTEHAESTYNALEQYGIDLTRLAAEGK 168
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRV++IL RRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L R
Sbjct: 169 LDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKR 228
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+++L MG+L+AGAKYRGEFEERLKAV++EV +++G+VILFIDE+H V+GAG+ EG++DA
Sbjct: 229 IVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAG 288
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+LR IGATTL+EYR+ +EKD A ERRFQ VYV EP+V +T+SILRGLKEK
Sbjct: 289 NMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTVEETISILRGLKEK 347
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D A++ AA LS RYIT R LPDKAIDL+DEA A +R+ L+S PEEID LE
Sbjct: 348 YEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALE 407
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK++QLEIE AL+KEKD S+ RL + E+ L +++ L +++E+E + ++R +
Sbjct: 408 RKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQ 467
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ +E+ ++ AER+YDL RAA+LRYG + ++EA + L + E D I
Sbjct: 468 HRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEED-I 526
Query: 538 AEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
AE+VSRWTGIPV++L + E+ +R++G EA+ AVA+++ R+RAGL P +
Sbjct: 527 AEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNR 586
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTELAK LA LFD E ++RIDM+EYME+H+VSRLIGAPPGYVG+
Sbjct: 587 PIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGY 646
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTD GRTVDFRNTVII+
Sbjct: 647 EEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIIL 706
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG+ +L G+ + RD+V + +++HFRPE LNRLDEIVVF PL+ EQ+R++
Sbjct: 707 TSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIV 766
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q+ + RLAE+ ++L +T+AA D + YDP++GARP+RR +++++ T L++ ++
Sbjct: 767 EIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILA 826
Query: 827 EEIDENSTVYIDASPKGDNLVYRV 850
E+ E V +D P G LV+ V
Sbjct: 827 GEVKEGDRVQVDVGPAG--LVFAV 848
>gi|384197880|ref|YP_005583624.1| ATP-dependent chaperone protein ClpB [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|333110632|gb|AEF27648.1| ATP-dependent chaperone protein ClpB [Bifidobacterium breve
ACS-071-V-Sch8b]
Length = 894
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/861 (52%), Positives = 603/861 (70%), Gaps = 35/861 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT EA+ A + A++AG+AQ LH+ ALL +G+ I AGG Q+
Sbjct: 9 KFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVVRSLIEAAGG--GPQAIGA 66
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
A+ LPS + + P AS L I +A+ + GD +++ + L++G+ + +
Sbjct: 67 AVRNALVALPSASGSSTSPPQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPN 126
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q ++ ++ GV A ++ V +RG G KV S + +++AL+ Y DL A GKLD
Sbjct: 127 QSAEILEKNGVTAASLRKAVPGVRG--GAKVTSPDAEGSYKALEKYSTDLTAAAKEGKLD 184
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L +LI
Sbjct: 185 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQGKKLI 244
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL E++ A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 245 SLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNM 304
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 305 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 364
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L+RK
Sbjct: 365 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRK 424
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ E+ +++ L+ K
Sbjct: 425 VTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAK 484
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG-----------NQSDENLML 528
++L + R +LA A+ + YG I ++ + E N +DE M+
Sbjct: 485 LDDLRVQADKFTREGNLADASKILYGEIPAIQKELAAAESADAESADAGAENPADEP-MV 543
Query: 529 TETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRS 577
+ V D +AE+VS WTGIPV RL G+NEK +R+IG EA+ AV+++V RS
Sbjct: 544 PDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRS 603
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAG+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLI
Sbjct: 604 RAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLI 663
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GA PGYVG+E+GGQLTEAVRRRPYSVVLFDEVEKA+ +F+ LLQVLDDGRLTDGQGRTV
Sbjct: 664 GAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 723
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+NT++IMTSNLG++ L++ M + V+ V +F+PE LNRLD+IV+F PL
Sbjct: 724 DFKNTILIMTSNLGSQFLVNEDM---DADAKKKAVMDAVHMNFKPEFLNRLDDIVMFHPL 780
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ E+L + +Q+K VA RL +R + L VTD+A + + YDP YGARP+RR ++ +V
Sbjct: 781 TREELGGIVDIQVKGVAQRLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVG 840
Query: 818 TELSRMLVREEIDENSTVYID 838
+L+RML+ ++ + TV +D
Sbjct: 841 DQLARMLLAGKVHDGDTVLVD 861
>gi|256846599|ref|ZP_05552056.1| ATP-dependent chaperone ClpB [Fusobacterium sp. 3_1_36A2]
gi|256718368|gb|EEU31924.1| ATP-dependent chaperone ClpB [Fusobacterium sp. 3_1_36A2]
Length = 858
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/860 (49%), Positives = 604/860 (70%), Gaps = 36/860 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
MNP++FT T AI +A +++ P LA+ LL +G+ + I G +
Sbjct: 2 MNPNQFTENTISAINLAVDISKGNMQQSIKPEALALGLLMQNNGLIPRVIEKMGLNLQYI 61
Query: 59 AQSAERVFNQAMK---KLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
E+ N K K+ ++ + D+ S ++ RA+ GD+ L+V+ +
Sbjct: 62 ISELEKEMNNYPKVEVKISNENLSLDQKTNS-----ILNRAEKIMNEMGDSFLSVEHIFR 116
Query: 116 GLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++E+ I FK+ G+ + + + +RG RKV++ + + T++ L+ Y +DLVE A
Sbjct: 117 AMIEEMPI---FKKLGINLEKYMEVLMNIRG--NRKVDNQNPEATYEVLEKYAKDLVELA 171
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GK+DP+IGRD EIRR ++I+SRRTKN+P+LIGEPGVGKTA+VEGLAQRI+ GDVP +L
Sbjct: 172 REGKIDPIIGRDSEIRRAIQIISRRTKNDPILIGEPGVGKTAIVEGLAQRILNGDVPESL 231
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ ++ +LDMGALVAGAKY+GEFEER+K VLKEVEE+ G +ILFIDEIH ++GAG+ EGS
Sbjct: 232 KNKKIFSLDMGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGS 291
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
+DA N+ KPMLARG+LR IGATT++EYRKY+EKD A ERRFQ + V EP++ DT+SILRG
Sbjct: 292 LDAGNMLKPMLARGELRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNIDDTISILRG 351
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LK+K+E +HGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +R ++DS PEE+
Sbjct: 352 LKDKFETYHGVRIADAAIVEAATLSQRYITDRKLPDKAIDLIDEAAAMIRTEIDSMPEEL 411
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L RK +QLEIE+ AL+KE D ASK RL + KEL +L ++ + L +++ EKE I +I
Sbjct: 412 DQLTRKALQLEIEIKALQKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDISKI 471
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLT 529
+ +K++ E + + +AER YDL + ++L+YG + +E + Q + N+ D ++ +L
Sbjct: 472 KNIKREIENVKLEMDKAEREYDLTKLSELKYGKLATLEKEL-QEQQNKIDKDGKDDSLLK 530
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSR 578
+ V D+IA++VSRWTGIPV++L + +KE+++ G EAV AVA+++LRS
Sbjct: 531 QEVTADEIADIVSRWTGIPVSKLTETKKEKMLHLEDHIKERVKGQDEAVKAVADTMLRSV 590
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P GSF+FLGPTGVGKT LAK LA LFD E+ +VRIDMSEYM++ SV+RLIG
Sbjct: 591 AGLKDPNRPMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDNVVRIDMSEYMDKFSVTRLIG 650
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEA+R +PYSV+LFDE+EKAH VFN LLQVLDDGRLTDGQGR VD
Sbjct: 651 APPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVD 710
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F+NT+IIMTSN+G+ HL+ + + R++V E++ F+PE LNR+DEI+ F L
Sbjct: 711 FKNTLIIMTSNIGS-HLI--LEDPALSESTREKVADELKARFKPEFLNRIDEIITFKALD 767
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++++ +L +KD+ +L + + L +D +D + +YDP YGARP+RR+++K++ T
Sbjct: 768 LSAIKEIVKLSLKDLENKLKPKHITLEFSDKMVDYLANNAYDPHYGARPLRRYIQKEIET 827
Query: 819 ELSRMLVREEIDENSTVYID 838
L++ ++ E+ E S V ID
Sbjct: 828 SLAKKILANEVHEKSNVLID 847
>gi|334125226|ref|ZP_08499217.1| chaperone protein ClpB [Enterobacter hormaechei ATCC 49162]
gi|333387301|gb|EGK58501.1| chaperone protein ClpB [Enterobacter hormaechei ATCC 49162]
Length = 861
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/857 (51%), Positives = 595/857 (69%), Gaps = 25/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 5 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAG-INAGQ 63
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S L++V+ + GD ++ + +L LE
Sbjct: 64 -LRTAIDQALSRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 122
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A V +EK+RG G V + QALK + DL E+A GK
Sbjct: 123 RGTLTDLLKSAGATTANVTQAIEKMRG--GESVNDQGAEDQRQALKKFTVDLTERAEQGK 180
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRIV G+VP L R
Sbjct: 181 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRR 240
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 241 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 300
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 301 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 360
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 361 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 420
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELD+ + L +K EK + + +K
Sbjct: 421 RRIIQLKLEQQALNKESDEASKKRLDMLNEELDEKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE-GNQSDENLM--LTETVGP 534
+ E+ A+++A R DLAR ++L+YG I E+E QLE QS+ M L V
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEK---QLEIATQSEGKTMRLLRNKVTD 537
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
+IAEV++RWTGIPV R+ ++E+E+L IG EAV AV+ ++ RSRAGL
Sbjct: 538 AEIAEVLARWTGIPVARMMESEREKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLSD 597
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGY
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGY 657
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV
Sbjct: 658 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 717
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ G++ +D VL V ++FRPE +NR+DE+VVF PL + +
Sbjct: 718 VIMTSNLGSD-LIQERFGELDYSHMKDLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIA 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+A++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++
Sbjct: 777 SIAQIQLQRLYKRLEERGYEIHISDDALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQ 836
Query: 824 LVREEIDENSTVYIDAS 840
++ E+ + ++A+
Sbjct: 837 ILSGELVPGKVIRLEAN 853
>gi|440771618|ref|ZP_20950532.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436420859|gb|ELP18714.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
Length = 857
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/854 (51%), Positives = 592/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S+ L++V+ + GD ++ + +L LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ VL V ++FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDPIYGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPIYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ + ++A+
Sbjct: 836 GELVPGKVIRLEAN 849
>gi|392393805|ref|YP_006430407.1| ATP-dependent chaperone ClpB [Desulfitobacterium dehalogenans ATCC
51507]
gi|390524883|gb|AFM00614.1| ATP-dependent chaperone ClpB [Desulfitobacterium dehalogenans ATCC
51507]
Length = 864
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/867 (50%), Positives = 614/867 (70%), Gaps = 25/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+ ++FT K+ EAI A +A G++Q P HL ++LL G+ Q + A
Sbjct: 3 FDTNRFTQKSQEAIIQAQTMAERNGNSQVEPEHLLLSLLEQGEGVVPQVLTKLNIPVGA- 61
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
A++V Q + + P + ++ S+ L V+ A + D +++ + L+L +L
Sbjct: 62 LAQKV-RQEINRFPRMMGSNVQLTISSRLRTVLVSAHDEMEIFKDEYVSTEHLLLAIL-- 118
Query: 121 SQIG----DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
SQ G + K+ G+ ++ + ++RG + +V S + + T++AL+ YGR+LVEQA
Sbjct: 119 SQAGGAAEKVLKQEGLNREKLLQALREVRGTQ--RVTSQTPEGTYRALEQYGRNLVEQAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRRV++ILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP ++
Sbjct: 177 RGKLDPVIGRDEEIRRVIQILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPESVK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D ++IALDMG+L+AGAKYRGEFEERLKAVLKEV+E E +ILFIDE+H V+GAG EG+M
Sbjct: 237 DKKIIALDMGSLIAGAKYRGEFEERLKAVLKEVQERE-DIILFIDELHTVVGAGAAEGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L +GATTL+EYRK++EKDAA ERRFQ V V PSV DT+SILRGL
Sbjct: 296 DAGNMLKPMLARGELHMVGATTLDEYRKFIEKDAALERRFQPVMVGAPSVEDTISILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGVRI D A++ AA LS RYI+ R LPDKAIDL+DEA A +R+++ S P E+D
Sbjct: 356 KERYETHHGVRITDGAIIAAAVLSDRYISDRFLPDKAIDLIDEAAARMRMEITSDPYELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
++R+ +QLEIE AL+KEKD+ SK RL ++ ++L + +++ L + + E+E + I
Sbjct: 416 QIKRRILQLEIEREALKKEKDEGSKERLEKIEEDLANHKEERSALEAQLQGEREVLATIN 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVG 533
LK+ ++ +++A++ +D +AA+L+YG + ++E + LE ++ +N +L + VG
Sbjct: 476 SLKENIDQTRLKMEQAQQAFDYNKAAELQYGVLPKLEKDLNALEEQLRNRKNTLLKQEVG 535
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
+ IAEVV++WT +PV RL ++E E+L IG EAV AVA++V RSRAGL
Sbjct: 536 EEDIAEVVAKWTQVPVARLLESEMEKLVHMEERIHQRVIGQEEAVKAVADAVRRSRAGLQ 595
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAKALAE LFDDE +VRIDMSEYME+H+VSRLIGAPPG
Sbjct: 596 DPNRPLGSFLFLGPTGVGKTELAKALAEFLFDDEQGIVRIDMSEYMEKHTVSRLIGAPPG 655
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRR+PYSVVLFDEVEKAH VFN LLQ+LDDGRLTDGQGR V+F+NT
Sbjct: 656 YVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHGDVFNVLLQLLDDGRLTDGQGRVVNFKNT 715
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
V+I+TSN+ + + + + R +V +E++ +FRPE LNRLDEI+VF PL E +
Sbjct: 716 VVILTSNIASPLIQELTASGASQEALRSRVTEELKVYFRPEFLNRLDEIIVFHPLGQEHI 775
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ ++Q+ + LA R + L ++DAAL+ ++ + YDP+YGARP++R +++ + L+
Sbjct: 776 GSIVQIQINRLRDYLAPRKITLGLSDAALNKIIQQGYDPVYGARPLKRVIQQNLQNPLAM 835
Query: 823 MLVREEIDENSTVYIDASPKGDNLVYR 849
+++ I E V + P+G+ L R
Sbjct: 836 KILQGVIHEGDHVVVKLDPQGELLFER 862
>gi|336419200|ref|ZP_08599466.1| ATP-dependent chaperone protein ClpB [Fusobacterium sp. 11_3_2]
gi|336163891|gb|EGN66805.1| ATP-dependent chaperone protein ClpB [Fusobacterium sp. 11_3_2]
Length = 857
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/860 (49%), Positives = 604/860 (70%), Gaps = 36/860 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
MNP++FT T AI +A +++ P LA+ LL +G+ + I G +
Sbjct: 1 MNPNQFTENTISAINLAVDISKGNMQQSIRPEALALGLLMQNNGLIPRIIEKMGLNLQYI 60
Query: 59 AQSAERVFNQAMK---KLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
E+ N K K+ ++ + D+ S ++ RA+ GD+ L+V+ +
Sbjct: 61 ISELEKEMNNYPKVEVKVSNENISLDQKTNS-----ILNRAEKIMNEMGDSFLSVEHIFK 115
Query: 116 GLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++E+ I FK G+ + + + +RG RKV++ + + T++ L+ Y +DLVE A
Sbjct: 116 AMIEEMPI---FKRLGINLEKYMEVLMNIRG--NRKVDNQNPEATYEVLEKYAKDLVELA 170
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GK+DP+IGRD EIRR ++I+SRRTKN+P+LIGEPGVGKTA+VEGLAQRI+ GDVP +L
Sbjct: 171 REGKIDPIIGRDSEIRRAIQIISRRTKNDPILIGEPGVGKTAIVEGLAQRILNGDVPESL 230
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ ++ +LDMGALVAGAKY+GEFEER+K VLKEVEE+ G +ILFIDEIH ++GAG+ EGS
Sbjct: 231 KNKKIFSLDMGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGS 290
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
+DA N+ KPMLARG+LR IGATT++EYRKY+EKD A ERRFQ + V EP++ DT+SILRG
Sbjct: 291 LDAGNMLKPMLARGELRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNIDDTISILRG 350
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LK+K+E +HGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +R ++DS PEE+
Sbjct: 351 LKDKFETYHGVRIADAAIVEAAVLSQRYITDRKLPDKAIDLIDEAAAMIRTEIDSMPEEL 410
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L RK +QLEIE+ AL+KE D ASK RL + KEL +L ++ + L +++ EKE I +I
Sbjct: 411 DQLTRKALQLEIEIKALQKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDISKI 470
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLT 529
+ +K++ E + +++AER YDL + ++L+YG + +E + Q + N+ D ++ +L
Sbjct: 471 KNIKREIENVKLEMEKAEREYDLTKLSELKYGKLATLEKEL-QEQQNKIDKDGKDDSLLK 529
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSR 578
+ V D+IA++VSRWTGIPV++L + +KE+++ G EAV AVA+++LRS
Sbjct: 530 QEVTADEIADIVSRWTGIPVSKLTETKKEKMLHLEDHIKERVKGQDEAVKAVADTMLRSV 589
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P GSF+FLGPTGVGKT LAK LA LFD E+ +VRIDMSEYM++ SV+RLIG
Sbjct: 590 AGLKDPNRPMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDSVVRIDMSEYMDKFSVTRLIG 649
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEA+R +PYSV+LFDE+EKAH VFN LLQVLDDGRLTDGQGR VD
Sbjct: 650 APPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVD 709
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F+NT+IIMTSN+G+ HL+ + + R++V E++ F+PE LNR+DEI+ F L
Sbjct: 710 FKNTLIIMTSNIGS-HLI--LEDPALSESTREKVTDELKARFKPEFLNRIDEIITFKALD 766
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++++ +L +KD+ +L + + L +D +D + +YDP YGARP+RR+++K++ T
Sbjct: 767 LPAIKEIVKLSLKDLENKLKSKHITLEFSDKMIDYLANNAYDPHYGARPLRRYIQKEIET 826
Query: 819 ELSRMLVREEIDENSTVYID 838
L++ ++ EI E S V ID
Sbjct: 827 SLAKKILANEIHEKSDVLID 846
>gi|404497700|ref|YP_006721806.1| ATP-dependent chaperone ClpB [Geobacter metallireducens GS-15]
gi|418067962|ref|ZP_12705288.1| ATP-dependent chaperone ClpB [Geobacter metallireducens RCH3]
gi|78195302|gb|ABB33069.1| ATP-dependent chaperone ClpB [Geobacter metallireducens GS-15]
gi|373557856|gb|EHP84236.1| ATP-dependent chaperone ClpB [Geobacter metallireducens RCH3]
Length = 864
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/866 (52%), Positives = 601/866 (69%), Gaps = 26/866 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
+ P+K T KT EA+A A +LA G+ P HL ALL G+ A + G A
Sbjct: 2 IRPEKMTIKTQEALAGAQQLAARQGNGTIEPEHLLAALLEQEGGLVAPILQKVGA--APA 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
S + +KKLP + A + S +L +++ AQ A D ++ + L+LG D
Sbjct: 60 SLRSSVDALLKKLPQVSGATAQAYLSPSLNRILDGAQREADAMKDEFVSTEHLLLGFFAD 119
Query: 121 SQIGDL--FKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
Q + G V + + ++RG G +V S + +QAL Y RDL + A G
Sbjct: 120 KQCAATRALLDGGATRENVLAALVEIRG--GERVTDQSPEDKYQALTKYARDLTDLARQG 177
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D
Sbjct: 178 KLDPVIGRDDEIRRVLQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSGDVPESLKDK 237
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL+ALDMGAL+AGAKYRGEFEERLKAV+KEV ++EGKVILFIDE+H ++GAG EG+MDA
Sbjct: 238 RLVALDMGALIAGAKYRGEFEERLKAVIKEVAKSEGKVILFIDELHTLVGAGAAEGAMDA 297
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+N+ KP LARG+L CIGATTL EYRKY+EKDAA ERRFQQVY EPSV DT++ILRGLKE
Sbjct: 298 SNMLKPALARGELHCIGATTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIAILRGLKE 357
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE +HG+RI+D A++ AA LS RYIT R LPDKAIDL+DEA + +R+++DS P EID +
Sbjct: 358 KYETYHGIRIKDSAIIAAATLSDRYITDRFLPDKAIDLIDEAASRLRIEIDSMPTEIDEV 417
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ERK +QLEIE AL +E+D + RL ++ EL+ L+ + L +++EKE I + L
Sbjct: 418 ERKIIQLEIEKQALLREQDPHALERLQKLTDELNGLQAQAAELKAHWRQEKEIIKGLSEL 477
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETV 532
KQ+ EE ++AER +LAR A++RYG I +E+E QLE Q E ML E V
Sbjct: 478 KQQLEERKEQAKKAEREGNLARTAEIRYGEIPAIEKEMEEKKQQLEALQK-EGKMLPEEV 536
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGL 581
+ +AE+VSRWTG+PV+R+ + E K R++G +A+ VA ++ R+R+GL
Sbjct: 537 DGELVAEIVSRWTGVPVSRMMEGEADKLVHMEERLKTRVVGQNDALLLVANAIRRARSGL 596
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P +P GSFLFLGPTGVGKTE AKALAE LF+D+ +VRIDMSEY E+H+V+RLIGAPP
Sbjct: 597 SDPNRPIGSFLFLGPTGVGKTETAKALAEFLFNDDQAIVRIDMSEYQEKHTVARLIGAPP 656
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAV+RRPYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRN
Sbjct: 657 GYVGYEEGGQLTEAVKRRPYSIVLFDEIEKAHAEVFNVLLQVLDDGRLTDGQGRTVDFRN 716
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
TVIIMTSNLG++ + G + V + +R+ F+PE LNR+DE+V++ L E+
Sbjct: 717 TVIIMTSNLGSQWIQQ--YGASDYTRMKQMVTETLRESFKPEFLNRIDEVVIYHALPLER 774
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
++++ +Q++ + RLAER + L +TD A + + E YDP YGARP++R +++KV L+
Sbjct: 775 IKQIIDIQIQGLKKRLAERHITLEITDKAREYLAQEGYDPAYGARPLKRAIQRKVQDPLA 834
Query: 822 RMLVREEIDENSTVYIDASPKGDNLV 847
ML+ + E T+ D S G+ LV
Sbjct: 835 LMLLEGKFREGDTIRADLSHGGEGLV 860
>gi|340000316|ref|YP_004731200.1| ClpB protein [Salmonella bongori NCTC 12419]
gi|339513678|emb|CCC31433.1| ClpB protein (heat shock protein f84.1) [Salmonella bongori NCTC
12419]
Length = 857
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/865 (50%), Positives = 596/865 (68%), Gaps = 22/865 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S L++V+ + GD ++ + +L LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLADLLKSAGATTANMTQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +EL+D + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELNDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV+R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLADPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ VL V +FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGRMKEMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
R+Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 RIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDASPKGDNLVYRVQ 851
E+ + ++A+ DN + VQ
Sbjct: 836 GELVPGKVIRLEAN---DNRIVAVQ 857
>gi|356573524|ref|XP_003554908.1| PREDICTED: chaperone protein ClpB3, chloroplastic-like [Glycine
max]
Length = 978
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/860 (50%), Positives = 602/860 (70%), Gaps = 32/860 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT +AI A E+A H HL ALL +G+ + + G +N R
Sbjct: 87 EFTEMAWQAIISAPEVAKENKHQIVETEHLMKALLEQKNGLARRIFSKVGVDNT-----R 141
Query: 65 VFNQAMKKLPSQTPAPDEIPASTT---LIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ K + Q E S L +I+RA+ +K +GD+ ++V+ +LG +D
Sbjct: 142 LLETTDKHIQRQPKVVGESTGSMLGRDLEALIQRARDFKKEYGDSFVSVEHFVLGFAQDK 201
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGKL 178
+ G LF++ ++ +KS +E +RG++ V + ++AL+ YG+DL + +AGKL
Sbjct: 202 RFGKILFRDFQISQQALKSAIESIRGRQ--LVIDQDPEGKYEALEKYGKDLTAMAKAGKL 259
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L + RL
Sbjct: 260 DPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALMNRRL 319
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAKYRGEFE+RLKAVLKEV E++G+ ILFIDEIH V+GAG + G+MDA N
Sbjct: 320 ISLDMGALIAGAKYRGEFEDRLKAVLKEVTESDGQTILFIDEIHTVVGAGASNGAMDAGN 379
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +PSV DT+SILRGL+E+Y
Sbjct: 380 LLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTISILRGLRERY 439
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDEA A +++++ S+P +D + R
Sbjct: 440 ELHHGVRISDSALVDAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEINR 499
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
++LE+E +L + DKASK RL + EL L++K L +++ EK + ++ +K+
Sbjct: 500 SVLKLEMERLSLMNDTDKASKDRLNRLETELSLLKEKQDELTGQWEHEKSVMTNLQSIKE 559
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG++ +++E+A +L + ML E V
Sbjct: 560 EIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLESAEKELHEYMNSGKSMLREEVTG 619
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
+ IAE+VS+WTGIP+++L Q+++ +R++G AV AVAE++ RSRAGL
Sbjct: 620 NDIAEIVSKWTGIPISKLQQSDREKLLYLEEELHKRVVGQDPAVKAVAEAIQRSRAGLSD 679
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+F+GPTGVGKTELAKALA LF+ E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 680 PHRPIASFMFMGPTGVGKTELAKALASYLFNTEEALVRIDMSEYMEKHTVSRLIGAPPGY 739
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTE VRRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QGRTV F NTV
Sbjct: 740 VGYEEGGQLTETVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTV 799
Query: 704 IIMTSNLGAEHLLS----GMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
IIMTSN+G++++L+ + + T + + +V+ R FRPE +NR+DE +VF PL
Sbjct: 800 IIMTSNVGSQYILNTDDDTVPKESTYEAIKQRVMDAARSIFRPEFMNRVDEYIVFQPLDR 859
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
+Q+ + RLQ++ V R+ +R + + VT+AA+ ++ + YDP YGARP++R +++ V E
Sbjct: 860 DQISSIVRLQLERVQKRIVDRKMKIQVTEAAIQLLGSLGYDPNYGARPVKRVIQQNVENE 919
Query: 820 LSRMLVREEIDENSTVYIDA 839
L++ ++R E E T+ +D
Sbjct: 920 LAKGILRGEFKEEDTILVDT 939
>gi|13472967|ref|NP_104534.1| endopeptidase Clp ATP-binding chain B, clpB [Mesorhizobium loti
MAFF303099]
gi|54035887|sp|Q98G96.1|CLPB_RHILO RecName: Full=Chaperone protein ClpB
gi|14023715|dbj|BAB50320.1| endopeptidase Clp ATP-binding chain B; ClpB [Mesorhizobium loti
MAFF303099]
Length = 868
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/865 (51%), Positives = 599/865 (69%), Gaps = 25/865 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ + I A +A S H QFTP H+ L+ D G+ A I AGG +
Sbjct: 1 MNLEKYSERVRGFIQSAQTMALSRNHQQFTPEHILKVLVDDDEGLAASLIERAGGN--VR 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
+ A++ +P ++ + L KV A+ K GD+ + V++L+ L +
Sbjct: 59 DVKLGVETALEAMPKVEGGNGQLYLAQPLAKVFSTAEELAKKAGDSFVTVERLLQALTME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ D+ +AGV + + +R +GR +SAS + + ALK Y RDL +AG
Sbjct: 119 KSAKTADILAKAGVTAQALNQVINDVR--KGRTADSASAEQNYDALKKYARDLTADARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV A G +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVTSANGNIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V+V EP+V DTVSILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVFVDEPTVEDTVSILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYI R LPDKAIDLVDEA + +R+Q+DS+PE +D +
Sbjct: 357 KYEQHHKVRISDSALVAAATLSNRYIADRFLPDKAIDLVDEAASRLRMQVDSKPEALDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RLV + KEL L ++ + +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDDASKDRLVRLEKELVGLEEESTEITAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ +E L A+R+ + RA +L YG I E+E + + E Q + M+ E V PD
Sbjct: 477 KKQLDEARNELAIAQRKGEFQRAGELAYGKIPELEKKLKEAEA-QDGKAGMVEEVVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A +VSRWTGIPV ++ Q E+++L +G EAV AV+++V R+RAGL P
Sbjct: 536 VAHIVSRWTGIPVDKMLQGERDKLLRMEDEIGKRVVGQGEAVQAVSKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDD++ +VRIDMSE+ME+HSV+RLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFDDDSAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 656 YEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLII 715
Query: 706 MTSNLGAEHLLSGMMGK-VTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
MTSNLGAE+L++ +G+ + RD+V+ VR FRPE LNR+DE+++F L + + +
Sbjct: 716 MTSNLGAEYLVN--LGEDQDVDAVRDEVMGVVRASFRPEFLNRVDEVILFHRLRRKDMDR 773
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q K + L +R + L++ A++ + A+ YDP YGARP++R ++K++ L+ +
Sbjct: 774 IVEIQFKRLESLLVDRKITLSLDHEAIEWLAAKGYDPAYGARPLKRVMQKELQDPLAEKI 833
Query: 825 VREEIDENSTVYIDASPKGDNLVYR 849
+ EI + STV + + D L +R
Sbjct: 834 LLGEILDGSTVKVTSG--SDRLNFR 856
>gi|154502368|ref|ZP_02039428.1| hypothetical protein RUMGNA_00181 [Ruminococcus gnavus ATCC 29149]
gi|153796993|gb|EDN79413.1| ATP-dependent chaperone protein ClpB [Ruminococcus gnavus ATCC
29149]
Length = 865
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/857 (50%), Positives = 610/857 (71%), Gaps = 27/857 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + +A+ ++A G+ + HL AL++ + + + +
Sbjct: 1 MNINKFTQNSMQAVQNCEKIAYDYGNQELAQEHLLYALVTQDDSLILKLLEKMSIQGP-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPD--EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+F +++L ++ P ++ L + A+ K GD +++V+ + L LL
Sbjct: 59 ----LFINRVEELLNKRPKVQGGQVFVGQDLNNALIHAEDEAKQMGDEYVSVEHIFLSLL 114
Query: 119 EDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ + + LF+E G++ + +RG + +V S + + T+ L YG+DLVE+A
Sbjct: 115 KYASRDLKPLFREFGISREGFLHALSTVRGNQ--RVTSDNPEATYDTLNKYGQDLVERAR 172
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
KLDPVIGRDEEIR V+RILSR+TKNNPVLIGEPGVGKTA VEGLAQRIV GDVP L
Sbjct: 173 DQKLDPVIGRDEEIRNVIRILSRKTKNNPVLIGEPGVGKTAAVEGLAQRIVSGDVPEGLK 232
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + ALDMGALVAGAKYRGEFEERLKAVL+EV+ ++GK+ILFIDE+H ++GAG+T+G+M
Sbjct: 233 DKTIFALDMGALVAGAKYRGEFEERLKAVLEEVKNSDGKIILFIDELHTIVGAGKTDGAM 292
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EPSV D +SILRGL
Sbjct: 293 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVEEPSVEDAISILRGL 352
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 353 KERYEVFHGVKITDSALVAAATLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELD 412
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L R+ MQLEIE AL+KE+D+ S+ RL +++EL L+++ ++++ EK ++ ++
Sbjct: 413 ELRRRVMQLEIEEEALKKEEDRLSRERLEHLQEELAGLKEEYAGKKVQWENEKTSVERVQ 472
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVG 533
+++++ E++ +Q+A+R YDL +AA+L+YG + +++ + + E ++L L E V
Sbjct: 473 KVREEIEQVNKEIQKAQREYDLNKAAELQYGRLPQLQKQLEEEEEKVKAKDLSLVHEAVT 532
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
++IA ++SRWTGIPV +L ++E+ R+IG E V V E+++RS+AG+
Sbjct: 533 DEEIARIISRWTGIPVAKLNESERSKTLHLGDELHRRVIGQDEGVELVTEAIIRSKAGIK 592
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAKALA+ LFDDEN +VRIDMSEYME++SVSRLIGAPPG
Sbjct: 593 DPTKPIGSFLFLGPTGVGKTELAKALAQSLFDDENNMVRIDMSEYMEKYSVSRLIGAPPG 652
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT
Sbjct: 653 YVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNT 712
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVA-RDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
++IMTSN+GA +LL G+ T++ + ++ V+ ++R HFRPE LNRLDEI++F PL+
Sbjct: 713 ILIMTSNIGANYLLEGIREDGTIEESYQNLVMNDLRAHFRPEFLNRLDEIIMFKPLTKSN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L +KDV RLA++ +++ +TDAA + V+ YDP+YGARP++R+L+K V T +
Sbjct: 773 IHAIIDLLVKDVNKRLADKELSIELTDAAKNFVVEGGYDPMYGARPLKRYLQKNVETLAA 832
Query: 822 RMLVREEIDENSTVYID 838
++++ + + ID
Sbjct: 833 KLILAGNVGRGDRIEID 849
>gi|410945117|ref|ZP_11376858.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Gluconobacter
frateurii NBRC 101659]
Length = 866
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/861 (51%), Positives = 605/861 (70%), Gaps = 24/861 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE-NAA 59
M+ KFT ++ + A +A H Q TP HL ALL D G + I AGG+
Sbjct: 1 MDIQKFTERSQGFLQAAQTIALRDYHQQLTPEHLLKALLDDEQGAASGLIRAAGGDPKVV 60
Query: 60 QSAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
Q+A + A+ KLP Q + A+ ++++ A+AA K GD+H+A D+L++ +
Sbjct: 61 QAAN---DAALAKLPKVQGGGAGQPQATPDFLRLLDSAEAAAKNAGDSHVAQDRLLVAIA 117
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQA 175
+S G + + ++ V ++R +GR V SAS + TF ALK Y RD+ V QA
Sbjct: 118 ASNSPAGKALVDGKADASALERAVAQIR--KGRTVTSASAENTFDALKKYARDVTAVAQA 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++L+RR+KNNPVLIGEPGVGKTA+VEGLA RIV GDVP L +
Sbjct: 176 GKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEALRN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LDMGAL+AGAK+RGEFEERLKAVLKEVE AEG++ILFIDE+H ++GAGR++G+MD
Sbjct: 236 KKLMSLDMGALIAGAKFRGEFEERLKAVLKEVETAEGEIILFIDEMHTLVGAGRSDGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG L CIGATTL+EYRKY+EKDAA RRFQ V+V EPSV DT+SILRG+K
Sbjct: 296 ASNLIKPELARGTLHCIGATTLDEYRKYIEKDAALARRFQPVFVGEPSVADTISILRGIK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PE +D
Sbjct: 356 EKYELHHGVRITDNAIVSAATLSNRYITDRFLPDKAIDLIDEAASRLRMQIDSKPEALDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE A+ KE D ASK RL + EL DL ++ + + EK+R++ I++
Sbjct: 416 LDRRIIQLKIEREAIRKEDDTASKDRLQALEAELADLEEQSDAMGAEWHAEKDRVNAIQK 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI--GQLEGNQSDENLMLTETVG 533
LK++ + + A+R+ +LA+A++L YG I +EA I Q E + + ++ + ++V
Sbjct: 476 LKEQLDTARSDVDVAQRQGNLAKASELMYGLIPNLEAQIAKAQEEEDAASKSGLFADSVT 535
Query: 534 PDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLG 582
IA VVSRWTGIPV R+ + E ++R++G +A+ AV+ +V R+RAGL
Sbjct: 536 EQGIASVVSRWTGIPVDRMLEGERAKLMRMEDTLRDRVVGQEQALVAVSNAVRRARAGLQ 595
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTEL KALA+ LFDDE L+RIDMSE+ME+H+VSRLIGAPPG
Sbjct: 596 DPNRPIGSFLFLGPTGVGKTELTKALAQFLFDDEKALLRIDMSEFMEKHAVSRLIGAPPG 655
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGG LTEAVRRRPY V+LFDEVEKAH +FN LLQVLDDGRLTDGQGR VDFRNT
Sbjct: 656 YVGYDEGGVLTEAVRRRPYQVILFDEVEKAHEDIFNILLQVLDDGRLTDGQGRVVDFRNT 715
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+I++TSNLG++ L + G+ + + + QV+Q VR HFRPE LNRLDEI++F L +
Sbjct: 716 IIVLTSNLGSDVLANQEDGE-SPDLVQAQVMQVVRNHFRPEFLNRLDEIILFSRLQRADM 774
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
++ +Q+ + L +R + L + + + + YDP+YGARP++R +++ + L+
Sbjct: 775 GRIVDIQLSRLRQLLEDRKITLELDEKGREWLAEAGYDPVYGARPLKRVIQRSLQNPLAG 834
Query: 823 MLVREEIDENSTVYIDASPKG 843
+L+ I + T+++ A KG
Sbjct: 835 LLLDGTIRDGDTIHVSAGEKG 855
>gi|337266185|ref|YP_004610240.1| ATP-dependent chaperone ClpB [Mesorhizobium opportunistum WSM2075]
gi|336026495|gb|AEH86146.1| ATP-dependent chaperone ClpB [Mesorhizobium opportunistum WSM2075]
Length = 868
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/865 (51%), Positives = 598/865 (69%), Gaps = 25/865 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ + I A +A S H QFTP H+ L+ D G+ A I AGG +
Sbjct: 1 MNLEKYSERVRGFIQSAQTMALSRNHQQFTPEHILKVLVDDDEGLAASLIERAGGN--VR 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
+ A++ +P ++ + L KV A+ K GD+ + V++L+ L +
Sbjct: 59 DVKLGVETALEAMPKVEGGNGQLYLAQPLAKVFSTAEELAKKAGDSFVTVERLLQALTME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ D+ +AGV + + +R +GR +SAS + + ALK Y RDL +AG
Sbjct: 119 KSAKTADILAKAGVTAQALNQVINDVR--KGRTADSASAEQGYDALKKYARDLTADARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV A G +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVTSANGSIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V+V EP+V DTVSILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVFVDEPTVEDTVSILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYI R LPDKAIDLVDEA + +R+Q+DS+PE +D +
Sbjct: 357 KYEQHHKVRISDSALVAAATLSNRYIADRFLPDKAIDLVDEAASRLRMQVDSKPEALDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL L ++ + +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDDASKDRLARLEKELVGLEEESTEITAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ +E L A+R+ + RA +L YG I E+E + + E Q + M+ E V PD
Sbjct: 477 KKQLDEARNDLAIAQRKGEFQRAGELAYGKIPELEKKLKEAEA-QDGKAGMVEEVVNPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A +VSRWTGIPV ++ Q E+++L +G EAV AV+++V R+RAGL P
Sbjct: 536 VAHIVSRWTGIPVDKMLQGERDKLLRMEDEIGKRVVGQGEAVQAVSKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDD++ +VRIDMSE+ME+HSV+RLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFDDDSAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 656 YEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLII 715
Query: 706 MTSNLGAEHLLSGMMGK-VTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
MTSNLGAE+L++ +G+ + RD+V+ VR FRPE LNR+DE+++F L + + +
Sbjct: 716 MTSNLGAEYLVN--LGEDQDVDAVRDEVMGVVRASFRPEFLNRVDEVILFHRLRRKDMDR 773
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+K + L +R + LA+ A++ + A+ YDP YGARP++R ++K + L+ +
Sbjct: 774 IVEIQLKRLESLLVDRKITLALDHEAIEWLAAKGYDPAYGARPLKRVMQKDLQDPLAEKI 833
Query: 825 VREEIDENSTVYIDASPKGDNLVYR 849
+ EI + STV + A D L +R
Sbjct: 834 LLGEILDGSTVKVTAG--SDRLNFR 856
>gi|219847263|ref|YP_002461696.1| ATP-dependent chaperone ClpB [Chloroflexus aggregans DSM 9485]
gi|219541522|gb|ACL23260.1| ATP-dependent chaperone ClpB [Chloroflexus aggregans DSM 9485]
Length = 861
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/864 (51%), Positives = 610/864 (70%), Gaps = 22/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
N ++FT K+ EAIA A A G+A+ P HL ALL G+ + + A
Sbjct: 3 FNTNRFTEKSYEAIAAAQAAAERLGNAEVQPEHLLYALLDQSDGVVPKVLAKLNLPVGAI 62
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ N + + P T ++ + L V+ +A GD +++ + L+L +L+
Sbjct: 63 KQQ--INNEIARFPRITSGSVQVQLGSRLRTVLVKAHDELAQFGDEYVSTEHLLLAILDH 120
Query: 121 S--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG-- 176
+ + K+AG+ ++ + ++RG ++V S + + T+ AL+ YGRDL E A
Sbjct: 121 AGGAAERVLKQAGLTRDKLLMALREVRG--AQRVTSPNPEGTYAALEQYGRDLTELAARN 178
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRRV++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP +L +
Sbjct: 179 KLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPESLKNK 238
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
R+IALD+GAL+AGAKYRGEFEERLKAVLKE++E + VILF+DE+H V+GAG EG+MDA
Sbjct: 239 RVIALDLGALIAGAKYRGEFEERLKAVLKEIQERD-DVILFVDELHTVVGAGAAEGAMDA 297
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+L +GATTL+EYRK++EKDAA ERRFQ V V PSV DT+SILRGLKE
Sbjct: 298 GNMLKPMLARGELHMVGATTLDEYRKHIEKDAALERRFQPVMVDPPSVEDTISILRGLKE 357
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D A++ AA LS RYI+ R LPDKAIDL+DEA A +R+++ S P+E+D+L
Sbjct: 358 RYETHHGVRITDGAIIAAAMLSDRYISDRFLPDKAIDLIDEAAARLRMEITSDPQELDDL 417
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQLEIE AL KEKD+ASK RL ++ +EL +LR++ L + ++E++ ++ I++L
Sbjct: 418 KRRIMQLEIEREALRKEKDQASKERLEKLEQELANLREQRSALEAQIQRERQELERIQQL 477
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K+K E+ A+++A+R+YD +AA+L+YG + +E + E +N +L + V
Sbjct: 478 KEKIEQTRAAIEQAQRQYDYNKAAELQYGTLVSLERELQAAEAALGGQNRLLRQEVTETD 537
Query: 537 IAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGRPQ 585
IAE++S+WTGIPVT+L G+ EK +R++G EAV AVA +V R+RAGL P
Sbjct: 538 IAEIISKWTGIPVTKLLEGELEKLVHMEERLHQRVVGQDEAVTAVANAVRRARAGLQDPN 597
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSFLFLGPTGVGKTELA+ALAE LFDDE +VRIDMSEYME+HSV+RLIGAPPGYVG
Sbjct: 598 RPLGSFLFLGPTGVGKTELARALAEFLFDDEQAMVRIDMSEYMEKHSVARLIGAPPGYVG 657
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGRLTDGQGR V+F+NTVII
Sbjct: 658 YDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRVVNFKNTVII 717
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSN+ + + R V++E+R RPE LNR+DE++VF PLS E + ++
Sbjct: 718 MTSNIASATIQELARAGAPQGEIRAAVMEELRSVLRPEFLNRIDEVIVFSPLSREHIDQI 777
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+ + LA+R + L +TDAA + AE YDP+YGARP++R +++++ L+ L+
Sbjct: 778 VEIQLNRLRKLLADRKLNLTLTDAARAQLAAEGYDPVYGARPLKRVIQQRIQNPLALQLL 837
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+ E ST+ +D + N V+R
Sbjct: 838 QGAFPEGSTIIVDV--ENGNFVFR 859
>gi|291086328|ref|ZP_06355437.2| ATP-dependent chaperone protein ClpB [Citrobacter youngae ATCC
29220]
gi|291068913|gb|EFE07022.1| ATP-dependent chaperone protein ClpB [Citrobacter youngae ATCC
29220]
Length = 861
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/854 (51%), Positives = 590/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 5 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAG-INAGQ 63
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S L++V+ + GD ++ + +L LE
Sbjct: 64 -LRTAIDQALSRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 122
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 123 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 180
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 181 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 240
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 241 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 300
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 301 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 360
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 361 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 420
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 421 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 540
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 541 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 600
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 601 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 660
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 661 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 720
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ +D VL V +FRPE +NR+DE+VVF PL + + +A
Sbjct: 721 TSNLGSD-LIQERFGELDYSHMKDMVLGVVSHNFRPEFINRIDEVVVFHPLGEKHIASIA 779
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 780 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 839
Query: 827 EEIDENSTVYIDAS 840
E+ T+ ++ +
Sbjct: 840 GELVPGKTIRLEVN 853
>gi|396489711|ref|XP_003843173.1| similar to heat shock protein [Leptosphaeria maculans JN3]
gi|312219751|emb|CBX99694.1| similar to heat shock protein [Leptosphaeria maculans JN3]
Length = 920
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/877 (49%), Positives = 603/877 (68%), Gaps = 47/877 (5%)
Query: 4 DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGI-----------FAQAINN 52
D +T + +A+A + +LA S H+Q TP+HLAV+L+ P + F Q +
Sbjct: 5 DAYTDRAAKALADSFDLAKSYSHSQLTPIHLAVSLIDPPKDLANQVDVPPPPLFKQVLER 64
Query: 53 AGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQ 112
A G+ AQ ER +A+ +LPSQ P P+ S + KV+R A+ K D+++AVD
Sbjct: 65 ANGD--AQLFERNLKKALVRLPSQDPPPERTSPSPAMAKVLRSAEELSKTQKDSYIAVDH 122
Query: 113 LILGLLEDSQIGDLFKEAGVA-VARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL 171
LI L +D+ I E+ V ++ + ++ LRG + ++A + + LK + D+
Sbjct: 123 LISSLCQDASIQRALSESNVPNTKQIDNAIQALRGTKRVDSKTADAEEENENLKKFTIDM 182
Query: 172 VEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDV 229
A GK+DPVIGR+EE RRV+RIL+RRTKNNPVLIGEPGVGKT VVEGLA+RIV DV
Sbjct: 183 TAMAREGKIDPVIGREEETRRVIRILTRRTKNNPVLIGEPGVGKTTVVEGLARRIVDADV 242
Query: 230 PSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGR 289
P+NLA +L++LD+GALVAG+KYRGEFE+R+K VLKE+E+++ ++LF+DEIHL++GAG
Sbjct: 243 PANLAACKLLSLDVGALVAGSKYRGEFEDRMKGVLKEIEDSKEMIVLFVDEIHLLMGAGS 302
Query: 290 T-EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTV 348
+ EG MDAANL KPMLARGQL CIGATTL EYRKY+EKDAAFERRFQQV V EPS+P+T+
Sbjct: 303 SGEGGMDAANLLKPMLARGQLHCIGATTLGEYRKYIEKDAAFERRFQQVLVKEPSIPETI 362
Query: 349 SILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDS 408
SILRGLKE+YE HHGV I D A+V AA L+ARY+T R LPD A+DL+DEA A VRV +S
Sbjct: 363 SILRGLKERYETHHGVTIMDGAIVSAATLAARYLTQRRLPDSAVDLIDEAAAAVRVTRES 422
Query: 409 QPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKE 468
QPE +DNLER+ QL+IE+HAL +EKD+ S+ RL E R E ++ ++L+PL Y++EK
Sbjct: 423 QPEALDNLERRHRQLQIEIHALSREKDEPSQVRLKEARAEAANIEEELKPLREMYEREKG 482
Query: 469 RIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQ--SDENL 526
R EI+ K K E L L EAER D+ A+DL+Y AI +VE I +LE ++ +D+ +
Sbjct: 483 RSKEIQEQKLKLEGLKTKLAEAERMRDIQTASDLKYYAIPDVEQRITELERDKARADQEM 542
Query: 527 -----------MLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLA 564
+++++VGPDQI E+V+RWTGIPVTRL +EK++L +G
Sbjct: 543 WAHQASGGGEALMSDSVGPDQINEIVARWTGIPVTRLKTSEKDKLLNMERHLSHVVVGQR 602
Query: 565 EAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDM 624
EAV +V+ ++ R+GL P QP SFLF GP+G GKT L KALAE LFDD ++R DM
Sbjct: 603 EAVTSVSNAIRLQRSGLANPNQPP-SFLFCGPSGTGKTLLTKALAEFLFDDPKAMIRFDM 661
Query: 625 SEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVL 684
SEY E+HS+SR+IGAPPGYVGH+ GGQLTEA+RR+P+S++LFDEVEKA V LLQ++
Sbjct: 662 SEYQERHSLSRMIGAPPGYVGHDSGGQLTEALRRKPFSILLFDEVEKAAKEVLTVLLQLM 721
Query: 685 DDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLL--SGMMGKVTMQVARDQVLQEVRKHFRP 742
DDGR+TDGQGR VD +N +++MTSNLGAEHL G GK+ ++ V+ +R F P
Sbjct: 722 DDGRITDGQGRVVDAKNCIVVMTSNLGAEHLSRPQGPDGKID-PTTKEMVMNALRNWFLP 780
Query: 743 ELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERG--VALAVTDAALDIVLAESYD 800
E LNR+ IV+F+ L+ ++RK+ +++ ++ RL G V + +T+ D + + Y
Sbjct: 781 EFLNRISSIVIFNRLTKREIRKIVDVRLAEIQKRLNANGRNVRIEMTNEVRDYLGSAGYS 840
Query: 801 PIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYI 837
P YGARP+ R +EK+V+ ++ +++R I + T +
Sbjct: 841 PAYGARPLARLIEKEVLNRMAVLILRGAIKDGETARV 877
>gi|126724795|ref|ZP_01740638.1| ATPase AAA-2 [Rhodobacterales bacterium HTCC2150]
gi|126705959|gb|EBA05049.1| ATPase AAA-2 [Rhodobacteraceae bacterium HTCC2150]
Length = 884
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/857 (51%), Positives = 599/857 (69%), Gaps = 21/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT ++ + A +A H + P+HL ALL D G+ + I+NAGG+ AQ
Sbjct: 14 MNLEKFTERSRGFLQAAQTIAQREDHQRLLPIHLLKALLDDEEGLASNLISNAGGD--AQ 71
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-LE 119
+ + + K+PS + ++ KV+ A+ K GD+ + V++++ L +
Sbjct: 72 QVLELTSAELAKMPSVSGDGSQLYMDNQTNKVLIEAEKVAKKAGDSFVPVERILTALAMV 131
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAGK 177
S+ + GV+ ++ + + +R +GR +SAS + + ALK Y DL Q GK
Sbjct: 132 KSKAREALDAGGVSAQKLNAAINDIR--KGRTADSASAENGYDALKKYAHDLTAAAQEGK 189
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DP+IGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L + R
Sbjct: 190 IDPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLRNKR 249
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L++LDMGAL+AGAKYRGEFEERLKAVL EV +A G+++LFIDE+H ++GAG+ +G+MDA+
Sbjct: 250 LLSLDMGALIAGAKYRGEFEERLKAVLSEVTDAAGEIVLFIDEMHTLVGAGKADGAMDAS 309
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L C+GATTL+EYRKYVEKDAA RRFQ V VAEP+V DTVSILRG+KEK
Sbjct: 310 NLLKPALARGELHCVGATTLDEYRKYVEKDAALARRFQPVVVAEPTVTDTVSILRGIKEK 369
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+++DS+PE +D L+
Sbjct: 370 YELHHGVRISDSALVSAATLSHRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEALDALD 429
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R MQ +IE+ AL+ E DKASK RL +++KE+ +L +K + +++ E++++ R LK
Sbjct: 430 RDIMQKQIEVEALKLEDDKASKTRLAKLQKEVSELMEKSSEMSAKWQAERDKLAVARDLK 489
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
++ + L A+R +L +A +L YG I ++E A+ + E N+SD ++ E V P+QI
Sbjct: 490 ERLDRARADLDIAKREGNLGKAGELSYGVIPDLEKALAESEANESDA--VVEEAVRPEQI 547
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
A VV RWTGIP TR+ + E+++L IG AV +V+ +V R+RAGL +
Sbjct: 548 AAVVERWTGIPTTRMLEGERDKLLRMEDELGRRVIGQKSAVRSVSNAVRRARAGLNDEAR 607
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KA+AE LFDD++ +VRIDMSE+ME+H+V+RLIGAPPGYVG+
Sbjct: 608 PLGSFLFLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHAVARLIGAPPGYVGY 667
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDG LTDGQGRTVDF+ T+II+
Sbjct: 668 EEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGILTDGQGRTVDFKQTLIIL 727
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLGA+ LS M AR V+ VR HFRPE LNRLDE ++FD L+ + + +
Sbjct: 728 TSNLGAQA-LSNMPEGADPSDARRDVMDAVRAHFRPEFLNRLDETIIFDRLARDDMAGIV 786
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q+ + RLA +G+ + + A D + E YDP++GARP++R +++ + +L+ ML+
Sbjct: 787 DIQIGLLQKRLAMQGIKMDLASEARDWLANEGYDPVFGARPLKRVIQRALQDQLAEMLLA 846
Query: 827 EEIDENSTVYIDASPKG 843
++ + + I A +G
Sbjct: 847 GDLGDGDVIPISAGAEG 863
>gi|418514455|ref|ZP_13080660.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|366079129|gb|EHN43118.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
Length = 857
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/854 (51%), Positives = 593/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S+ L++V+ + GD ++ + +L LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV R+ + E+E+L IG EAV+AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVDAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ VL V ++FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ + ++A+
Sbjct: 836 GELVPGKVIRLEAN 849
>gi|198283746|ref|YP_002220067.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665588|ref|YP_002426377.1| clpB protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198248267|gb|ACH83860.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218517801|gb|ACK78387.1| clpB protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 866
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/848 (52%), Positives = 596/848 (70%), Gaps = 30/848 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DK T K +A A LA + H Q P+HL A L GI ++ AG A
Sbjct: 1 MRTDKLTTKFQQAFQDAQSLALAQDHQQMEPIHLLAAFLDQEGGIARPLLSKAGVRVDAL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ N+A++ +P P E+ L ++ A + GDT+++ + +L L++D
Sbjct: 61 RNQ--LNRALESMPKVQGHPGEVQVGRDLTNMLNLADKIGQKRGDTYISTEHFLLALMDD 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ G L KEAG ++ V L G G K+ A+ + QAL+ Y D E+A GK
Sbjct: 119 KGEAGRLLKEAGATTKDLEQAVHDLHG--GEKINDANAEEQRQALEKYTIDYTERASQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD+EIRR +++L RR+KNNPVLIGEPGVGKTA+VEGLA R++ G+VP +L D R
Sbjct: 177 LDPVIGRDDEIRRTIQVLLRRSKNNPVLIGEPGVGKTAIVEGLALRLINGEVPESLRDKR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L+ LD+GAL+AGAK+RGEFEERLK++L ++E++EGK+ILFIDEIH ++GAG+ EGSMDA
Sbjct: 237 LLGLDLGALIAGAKFRGEFEERLKSLLNDLEKSEGKIILFIDEIHTLVGAGKAEGSMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L CIGATTL+EYRKY+EKDAA ERRFQ+V V EPSV D ++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQRVLVDEPSVEDAIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV A QLS RYIT R+LPDKAIDL+DEA + +++++DS+P+E+D LE
Sbjct: 357 YEAHHGVRITDPALVAAVQLSHRYITDRNLPDKAIDLMDEAASRIKMEIDSKPQELDELE 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL IE ALEKEKD+AS+ RL ++ ++ + K Q L +K EK I+ +++
Sbjct: 417 RRIIQLNIERVALEKEKDEASRKRLDILQAQIKESDRKYQELEEVWKGEKLAIEGTSQIQ 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI------GQLEGNQSDENLMLTET 531
++ + L A R DL R A+L+Y +I +EA + Q G+ + L+ TE
Sbjct: 477 KELDRKRVELDTARRANDLERMAELQYSSIPALEAQLHAAEIHAQSAGSGAKPTLLRTE- 535
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
VG ++IAEVV+RWTGIPV+++ + EKE+L +G +EAV AV+ ++ RSRAG
Sbjct: 536 VGEEEIAEVVARWTGIPVSKMLEGEKEKLLKMEERLQARVVGQSEAVAAVSNAIRRSRAG 595
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P++P GSFLFLGPTGVGKTEL KALAE LFD E+ LVRIDMSE+ME+HSV+RLIGAP
Sbjct: 596 LSDPKRPNGSFLFLGPTGVGKTELTKALAEFLFDSEDHLVRIDMSEFMEKHSVARLIGAP 655
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGG LTEAVRR+PYSVVL DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFR
Sbjct: 656 PGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFR 715
Query: 701 NTVIIMTSNLGAEHL--LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
NTVI+MTSNLG++ + S +M+VA VL V+ HFRPE LNR+DE+V+F PL+
Sbjct: 716 NTVIVMTSNLGSDRIQEFSRKGEYDSMRVA---VLDVVQDHFRPEFLNRIDELVIFRPLT 772
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
QLR++ +QM + RL ER + L ++D ALD + YDP+YGARP++R +++++
Sbjct: 773 AVQLREITGIQMGFLRSRLRERDMDLVLSDGALDHLAEVGYDPVYGARPLKRVIQREIEN 832
Query: 819 ELSRMLVR 826
L++ L+R
Sbjct: 833 PLAQKLLR 840
>gi|302529318|ref|ZP_07281660.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
gi|302438213|gb|EFL10029.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
Length = 874
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/862 (52%), Positives = 607/862 (70%), Gaps = 31/862 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+P++ T K+ EA+ A A G + HL +ALL G+ ++ + AG + A
Sbjct: 1 MDPNRLTRKSQEALHDAQTAALRYGQPEVDGEHLLLALLDQSDGLASRLLEEAGADPA-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLI-KVIRRAQAAQKAHG---DTHLAVDQLILG 116
E+ A+ + P + P P T + ++ R AA + G D +++V+ L+
Sbjct: 59 RLEQELEAALSRRP-KVSGPGVTPGETRVTARLARVLDAADREAGRLKDDYVSVEHLLAA 117
Query: 117 LLED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE 173
LLE+ S G L + AG+ + + K+RG + +V SA+ ++ ++AL+ YGRDLV
Sbjct: 118 LLEEGSSSAAGRLLRGAGLTRDKFLEVLRKVRGNQ--RVTSATPESAYEALEKYGRDLVA 175
Query: 174 QA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPS 231
A GKLDPVIGRD EIRRV++ILSR+TKNNPVL G+PGVGKTA+VEGLAQRI RGDVP
Sbjct: 176 DAAAGKLDPVIGRDAEIRRVIQILSRKTKNNPVLTGDPGVGKTAIVEGLAQRIDRGDVPE 235
Query: 232 NLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTE 291
L + +LD+GALVAGAKYRGEFEERLKAVL EV AEG+++LF+DE+H V+GAG TE
Sbjct: 236 GLKGKTVFSLDLGALVAGAKYRGEFEERLKAVLNEVTAAEGRILLFVDELHTVVGAGATE 295
Query: 292 GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSIL 351
G+MDA N+ KPMLARG+L IGATT +EYRKY+EKDAA ERRFQ V V EPSV D +SI+
Sbjct: 296 GAMDAGNMLKPMLARGELHLIGATTADEYRKYIEKDAALERRFQPVLVDEPSVEDAISIM 355
Query: 352 RGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPE 411
RGL+E+ E HGV+IQD ALV A LS RYI+ R LPDKAIDLVDEACA +R ++DS P
Sbjct: 356 RGLRERLEVFHGVKIQDSALVAAVVLSHRYISDRFLPDKAIDLVDEACAMLRTEIDSMPA 415
Query: 412 EIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERID 471
E+D L R+ + EIE AL KE D ASKARL E+R+EL DLR + + +++ E+ +
Sbjct: 416 ELDELSRRLTRTEIEEAALAKETDAASKARLEELRRELVDLRAEAGGMRTQWEAERSALH 475
Query: 472 EIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI---GQLEGNQSDENLML 528
+++ L+++ E++ AER YDL +AA+LR+G + E+E + +L + +L
Sbjct: 476 KVQALREEIEQVSRDADAAERAYDLNKAAELRHGKLPELERRLVGEEELLATRQAGTRLL 535
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRS 577
E V ++IA VVSRWTGIPV+RL + E+ ER+IG EAV VA++++R+
Sbjct: 536 REVVTEEEIAAVVSRWTGIPVSRLQEGEREKLLRLDELLHERVIGQDEAVQLVADAIIRA 595
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
R+ + P++P GSFLFLGPTGVGKTELAKALA LFD E+ +VRIDMSEY E+H+VSRL+
Sbjct: 596 RSRIKDPRRPIGSFLFLGPTGVGKTELAKALAADLFDTEDNIVRIDMSEYQERHTVSRLV 655
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQVLDDGRLTD QGRTV
Sbjct: 656 GAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRLTDAQGRTV 715
Query: 698 DFRNTVIIMTSNLGAEHLLSGMM--GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFD 755
DFRNTVIIMTSN+GA LL G+ G++T + ARD+V+ +R HFRPE LNR+D+IV+F
Sbjct: 716 DFRNTVIIMTSNIGAHFLLDGVNAEGEIT-ESARDEVMAALRGHFRPEFLNRIDDIVLFK 774
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PL+ ++ +V L + D+ RLAE+ + L V+D AL + + +DP+YGARP+RR+L ++
Sbjct: 775 PLTLPEIERVVELMLGDLRKRLAEQNMTLEVSDKALRFIAEQGFDPVYGARPLRRFLARE 834
Query: 816 VVTELSRMLVREEIDENSTVYI 837
V T + R L+ + +N+ V +
Sbjct: 835 VETRIGRALLGGDAHDNTVVDV 856
>gi|449460533|ref|XP_004148000.1| PREDICTED: chaperone protein ClpB3, chloroplastic-like [Cucumis
sativus]
gi|449501963|ref|XP_004161506.1| PREDICTED: chaperone protein ClpB3, chloroplastic-like [Cucumis
sativus]
Length = 973
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/861 (50%), Positives = 604/861 (70%), Gaps = 34/861 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT +A+ + E+A H HL LL +G+ + + G +N R
Sbjct: 81 EFTEMAWQAVVSSPEIAKENKHQIVETEHLMKTLLEQKNGLARRIFSKIGVDNT-----R 135
Query: 65 VFNQAMKKLPSQTPAPDEIPASTT---LIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ K + Q E S L +I+RA+ +K +GD+ ++V+ L+LG + D
Sbjct: 136 LLEATDKFIKRQPKVLGESAGSMLGRDLEALIQRAREFKKEYGDSFVSVEHLVLGFVNDQ 195
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGKL 178
+ G LFK+ +++ +KS VE +RG++ + G +++L+ YG+DL + ++GKL
Sbjct: 196 RFGKQLFKDFQISLQTLKSAVESIRGRQSVIDQDPEG--KYESLEKYGKDLTALARSGKL 253
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L + RL
Sbjct: 254 DPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALMNRRL 313
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAKYRGEFE+RLKAVLKEV E++G++ILFIDEIH V+GAG T G+MDA N
Sbjct: 314 ISLDMGALIAGAKYRGEFEDRLKAVLKEVTESDGQIILFIDEIHTVVGAGATNGAMDAGN 373
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +P+V DT+SILRGL+E+Y
Sbjct: 374 LLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTISILRGLRERY 433
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDEA A +++++ S+P +D + R
Sbjct: 434 ELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEINR 493
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
++LE+E +L + D+AS+ RL + EL L++K L +++ EK + ++ +K+
Sbjct: 494 AVLKLEMERLSLTNDTDRASRDRLSRLEAELSLLKEKQAQLTEQWEHEKSVMTRLQSIKE 553
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL-----MLTETVG 533
+ + + +Q+AER YDL RAA+L+YG++ ++ + E + DE + ML E V
Sbjct: 554 EIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLADAE-KELDEYMNSGKSMLREEVT 612
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLG 582
IAE+VS+WTGIPV++L Q+E+ +R++G AV +VA+++ RSRAGL
Sbjct: 613 GSDIAEIVSKWTGIPVSKLQQSEREKLLHLEEELHKRVVGQDPAVKSVADAIQRSRAGLS 672
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P SF+F+GPTGVGKTELAKALA LF+ E LVRIDMSEYME+H+VSRLIGAPPG
Sbjct: 673 DPNRPIASFMFMGPTGVGKTELAKALASYLFNTEEALVRIDMSEYMEKHAVSRLIGAPPG 732
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTE VRRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QGRTV F NT
Sbjct: 733 YVGYEEGGQLTETVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNT 792
Query: 703 VIIMTSNLGAEHLLS----GMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
VIIMTSN+G++++L+ G + T + + +VL+ R FRPE +NR+DE +VF PL
Sbjct: 793 VIIMTSNVGSQYILNTDDDGQTTETTYETIKRRVLEAARSVFRPEFMNRVDEYIVFQPLD 852
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
+Q+ + RLQ++ V R+A++ + + V+DAA+ ++ + YDP YGARP++R +++ V
Sbjct: 853 RDQISSIVRLQLQRVQKRVADKKMKIEVSDAAIQLLGSLGYDPNYGARPVKRVIQQNVEN 912
Query: 819 ELSRMLVREEIDENSTVYIDA 839
E+++ +++ E + T+ ID
Sbjct: 913 EIAKGILKGEFKDEDTILIDT 933
>gi|61679301|gb|AAX52929.1| ClpB [Bifidobacterium breve UCC2003]
Length = 894
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/863 (52%), Positives = 605/863 (70%), Gaps = 35/863 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT EA+ A + A++AG+AQ LH+ ALL +G+ I AGG+ A A
Sbjct: 9 KFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVVRSLIEAAGGDPQAIGA-- 66
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
A+ LPS + + P AS L I +A+ + GD +++ + L++G+ + +
Sbjct: 67 AVRNALVALPSASGSSTSQPQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPN 126
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q ++ ++ GV A ++ V +RG G KV S + +++AL+ Y DL A GKLD
Sbjct: 127 QSAEILEKNGVTAASLRKAVPGVRG--GAKVTSPDAEGSYKALEKYSTDLTAAAKEGKLD 184
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L +LI
Sbjct: 185 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQGKKLI 244
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL E++ A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 245 SLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNM 304
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 305 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 364
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L+RK
Sbjct: 365 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRK 424
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ E+ +++ L+ K
Sbjct: 425 VTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAK 484
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG-----------NQSDENLML 528
++L + R +LA A+ + YG I ++ + E N +DE M+
Sbjct: 485 LDDLRVQADKFTREGNLAEASKILYGEIPAIQKELAAAESADAESADAGAENPADEP-MV 543
Query: 529 TETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRS 577
+ V D +AE+VS WTGIPV RL G+NEK +R+IG EA+ V+++V RS
Sbjct: 544 PDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLHMEDYLSKRVIGQKEAIATVSDAVRRS 603
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAG+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLI
Sbjct: 604 RAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLI 663
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GA PGYVG+E+GGQLTEAVRRRPYSVVLFDEVEKA+ +F+ LLQVLDDGRLTDGQGRTV
Sbjct: 664 GAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 723
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+NT++IMTSNLG++ L++ M + A V+ V +F+PE LNRLD+IV+F PL
Sbjct: 724 DFKNTILIMTSNLGSQFLVNEDMDADAKKRA---VMDAVHMNFKPEFLNRLDDIVMFHPL 780
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ E+L + +Q+K VA RL +R + L VTD+A + + YDP YGARP+RR ++ +V
Sbjct: 781 TREELGGIVDIQVKGVAQRLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVG 840
Query: 818 TELSRMLVREEIDENSTVYIDAS 840
+L+RML+ ++ + TV +D +
Sbjct: 841 DQLARMLLAGKVHDGDTVLVDQT 863
>gi|237729507|ref|ZP_04559988.1| disaggregation chaperone [Citrobacter sp. 30_2]
gi|226908113|gb|EEH94031.1| disaggregation chaperone [Citrobacter sp. 30_2]
Length = 861
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/854 (51%), Positives = 590/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 5 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAG-INAGQ 63
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S L++V+ + GD ++ + +L LE
Sbjct: 64 -LRTAIDQALSRLPQVEGTGGDVQPSQELVRVLNLCDKLAQKRGDNFISSELFVLAALES 122
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 123 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 180
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 181 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 240
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 241 VLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAG 300
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 301 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 360
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 361 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 420
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 421 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 540
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 541 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 600
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 601 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 660
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 661 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 720
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ +D VL V +FRPE +NR+DE+VVF PL + + +A
Sbjct: 721 TSNLGSD-LIQERFGELDYGHMKDMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 779
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 780 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 839
Query: 827 EEIDENSTVYIDAS 840
E+ T+ ++ +
Sbjct: 840 GELIPGKTIRLEVN 853
>gi|341614681|ref|ZP_08701550.1| ATP-dependent Clp protease [Citromicrobium sp. JLT1363]
Length = 859
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/855 (52%), Positives = 603/855 (70%), Gaps = 24/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN ++FT + + A A H + TPLH+ LL D G+ A + AGG+
Sbjct: 1 MNLEQFTDRAKGFLQSAQTTAIRLNHQRITPLHILKVLLDDAEGMAAGLVQRAGGDPV-- 58
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LG 116
AE+ + + ++P S + A ++V+ +AQ + GD+ + V++L+ L
Sbjct: 59 RAEQRVDDELARIPAVSGSGAQASPGLDNDSVRVLDQAQQIAEKSGDSFVTVERLLVALA 118
Query: 117 LLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
L +S+ G EAGV ++ + +LR +G+ ++A+ + + A++ Y RDL + A
Sbjct: 119 LASNSKAGSALAEAGVDAKALERAIGELR--KGKTADTANAEQAYDAMQKYARDLTQAAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRDEEIRR V+IL+RRTKNNP LIGEPG GKTA+ EGLA RI GDVP +L
Sbjct: 177 DGKLDPVIGRDEEIRRTVQILARRTKNNPALIGEPGTGKTAIAEGLALRIANGDVPDSLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ ++G++ILFIDE+H ++GAG +EGSM
Sbjct: 237 NRTLMALDMGALIAGAKYRGEFEERLKAVLDEVKGSDGQIILFIDEMHTLIGAGASEGSM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA+NL KP L+RG+L CIGATTL+EY+KYVEKD A +RRFQ VY+ EPSV DT+SILRG+
Sbjct: 297 DASNLLKPALSRGELHCIGATTLDEYQKYVEKDPALQRRFQPVYIEEPSVEDTISILRGI 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KEKYE HHGVRI D A+V AAQLS RYI R +PDKAIDL+DEA + +R++++S+PEEI+
Sbjct: 357 KEKYELHHGVRITDGAIVAAAQLSNRYIQNRFMPDKAIDLMDEAASRIRMEVESKPEEIE 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
NL+R+ +QL+IE AL KE D AS RL ++R++L +L + L R++ E+++I
Sbjct: 417 NLDRRIIQLKIEEQALAKESDDASAQRLEDLREDLANLEQRSAELTTRWQGERDKIHAES 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGP 534
RLK++ ++ L++A+R DLA+A +L+YG I E+E + + EG+ S N +L E V
Sbjct: 477 RLKEELDQARIELEQAQRAGDLAKAGELQYGRIPELENKLKEAEGHTS--NALLREEVTE 534
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
+ IA VV+RWTGIPV R+ + E++ R+IG +AV AV+++V R+RAGL
Sbjct: 535 EDIAGVVARWTGIPVDRMLEGERDKLLRMEEALGKRVIGQKDAVEAVSKAVRRARAGLKD 594
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL KALA+ LFDD+N +VRIDMSE+ME+H+V+RLIGAPPGY
Sbjct: 595 PGRPLGSFLFLGPTGVGKTELTKALAQFLFDDDNAMVRIDMSEFMEKHAVARLIGAPPGY 654
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTE+VRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGR VDF NT+
Sbjct: 655 VGYEEGGVLTESVRRRPYQVVLFDEVEKAHSDVFNVLLQVLDDGRLTDGQGRVVDFSNTL 714
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
II+TSNLG+++ LS M + QV+ VR HFRPE LNRLDEI++F LS E +
Sbjct: 715 IILTSNLGSQY-LSNMSDDQQVSDVEPQVMDVVRGHFRPEFLNRLDEIILFHRLSQEDMA 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ LQ+ V L++R + L +T+AA + YDP+YGARP++R +++ V L+
Sbjct: 774 PIVELQVNRVQRLLSDRKIELELTEAAKRWLGRVGYDPVYGARPLKRAVQRYVQDPLAER 833
Query: 824 LVREEIDENSTVYID 838
L++ E+ + STV ID
Sbjct: 834 LLQGEVPDGSTVKID 848
>gi|237743711|ref|ZP_04574192.1| chaperone clpB [Fusobacterium sp. 7_1]
gi|229432742|gb|EEO42954.1| chaperone clpB [Fusobacterium sp. 7_1]
Length = 858
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/860 (49%), Positives = 604/860 (70%), Gaps = 36/860 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
MNP++FT T AI +A +++ P LA+ LL +G+ + I G +
Sbjct: 2 MNPNQFTENTISAINLAVDISKGNMQQSIRPEALALGLLMQNNGLIPRVIEKMGLNLQYI 61
Query: 59 AQSAERVFNQAMK---KLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
E+ N K K+ ++ + D+ S ++ RA+ GD+ L+V+ +
Sbjct: 62 ISELEKEMNNYPKVEVKVSNENISLDQKTNS-----ILNRAEKIMNEMGDSFLSVEHIFK 116
Query: 116 GLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++E+ I FK G+ + + + +RG RKV++ + + T++ L+ Y +DLVE A
Sbjct: 117 AMIEEMPI---FKRLGINLEKYMEVLMNIRG--NRKVDNQNPEATYEVLEKYAKDLVELA 171
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GK+DP+IGRD EIRR ++I+SRRTKN+P+LIGEPGVGKTA+VEGLAQRI+ GDVP +L
Sbjct: 172 REGKIDPIIGRDSEIRRAIQIISRRTKNDPILIGEPGVGKTAIVEGLAQRILNGDVPESL 231
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ ++ +LDMGALVAGAKY+GEFEER+K VLKEVEE+ G +ILFIDEIH ++GAG+ EGS
Sbjct: 232 KNKKIFSLDMGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGS 291
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
+DA N+ KPMLARG+LR IGATT++EYRKY+EKD A ERRFQ + V EP++ DT+SILRG
Sbjct: 292 LDAGNMLKPMLARGELRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNIDDTISILRG 351
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LK+K+E +HGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +R ++DS PEE+
Sbjct: 352 LKDKFETYHGVRIADAAIVEAAVLSQRYITDRKLPDKAIDLIDEAAAMIRTEIDSMPEEL 411
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L RK +QLEIE+ AL+KE D ASK RL + KEL +L ++ + L +++ EKE I +I
Sbjct: 412 DQLTRKALQLEIEIKALQKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDISKI 471
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLT 529
+ +K++ E + +++AER YDL + ++L+YG + +E + Q + N+ D ++ +L
Sbjct: 472 KNIKREIENVKLEMEKAEREYDLTKLSELKYGKLATLEKEL-QEQQNKIDKDGKDDSLLK 530
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSR 578
+ V D+IA++VSRWTGIPV++L + +KE+++ G EAV AVA+++LRS
Sbjct: 531 QEVTADEIADIVSRWTGIPVSKLTETKKEKMLHLEDHIKERVKGQDEAVKAVADTMLRSV 590
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P GSF+FLGPTGVGKT LAK LA LFD E+ +VRIDMSEYM++ SV+RLIG
Sbjct: 591 AGLKDPNRPMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDSVVRIDMSEYMDKFSVTRLIG 650
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEA+R +PYSV+LFDE+EKAH VFN LLQVLDDGRLTDGQGR VD
Sbjct: 651 APPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVD 710
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F+NT+IIMTSN+G+ HL+ + + R++V E++ F+PE LNR+DEI+ F L
Sbjct: 711 FKNTLIIMTSNIGS-HLI--LEDPALSESTREKVTDELKARFKPEFLNRVDEIITFKALD 767
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++++ +L +KD+ +L + + L +D +D + +YDP YGARP+RR+++K++ T
Sbjct: 768 LPAIKEIVKLSLKDLENKLKSKHITLEFSDKMIDYLANNAYDPHYGARPLRRYIQKEIET 827
Query: 819 ELSRMLVREEIDENSTVYID 838
L++ ++ EI E S V ID
Sbjct: 828 SLAKKILANEIHEKSDVLID 847
>gi|331700249|ref|YP_004336488.1| ATP-dependent chaperone ClpB [Pseudonocardia dioxanivorans CB1190]
gi|326954938|gb|AEA28635.1| ATP-dependent chaperone ClpB [Pseudonocardia dioxanivorans CB1190]
Length = 871
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/859 (53%), Positives = 599/859 (69%), Gaps = 27/859 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT +AI+ A + AT AG+ P HL ALL+ GI A + G + AA
Sbjct: 4 FNP---TTKTQQAISAAAQAATLAGNPDVGPTHLLGALLAQGDGIAAPLLEAVGADAAAV 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
AE Q ++LP+ + P S + I AQ GD +++ + L++GL +
Sbjct: 61 RAE--LTQLGQRLPAAAGSTVSAPQLSREALAAITAAQQLATEMGDEYVSTEHLLVGLAD 118
Query: 120 DS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ DL + G ++ K+RG +V S + T+QAL+ YG+DL +A G
Sbjct: 119 KGGPVADLLRRHGATPDALREAFTKVRGSS--RVTSPDPEGTYQALEKYGQDLTARAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D
Sbjct: 177 KLDPVIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMD 295
R++ALD+G++VAGAKYRGEFEERLKAVLKE+ ++ G++I FIDE+H ++GAG T EG+MD
Sbjct: 237 RVVALDLGSMVAGAKYRGEFEERLKAVLKEITDSAGEIITFIDELHTIVGAGATGEGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KPMLARG+LR +GATTL+EYR+++EKD A ERRFQQV V EPSV DTV ILRGLK
Sbjct: 297 AGNMIKPMLARGELRMVGATTLDEYRQHIEKDPALERRFQQVLVGEPSVEDTVGILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+P EID
Sbjct: 357 ERYEVHHGVRITDAALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDT 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ER +LEIE ALEKE D ASK RL +R EL + R++L L R++ EK I+ R
Sbjct: 417 VERAVRRLEIEEMALEKESDAASKERLAALRSELAEKREQLSALTARWQNEKGAIEATRE 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVGP 534
L + E+L + A+R DL RA++L YG I +E + + + E++ML E VGP
Sbjct: 477 LAAQLEQLRGEYERADRDGDLGRASELLYGRIPALEKELAAKTADVERTEDVMLKEEVGP 536
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D +A+VVS WTGIP R+ + E +R++G AEAV +V+++V R+RAG+
Sbjct: 537 DDVADVVSAWTGIPAGRMLEGETAKLLRMEDELGKRVVGQAEAVRSVSDAVRRARAGIAD 596
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
+PTGSFLFLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RL+GAPPGY
Sbjct: 597 ENRPTGSFLFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGY 656
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+++GGQLTEAVRRRPY+VVLFDEVEKAH VF+TLLQVLDDGRLTDGQGRTVDFRNT+
Sbjct: 657 VGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDTLLQVLDDGRLTDGQGRTVDFRNTI 716
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+++TSNLG++ + + +D V+ V++HF+PE LNRLD++VVF LS E+L
Sbjct: 717 LVLTSNLGSQAIADPALDDAAR---KDAVMSVVQRHFKPEFLNRLDDVVVFHALSTEELT 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q+ + RLA R + L V+DAA + + +DP+YGARP+RR ++ + +L++
Sbjct: 774 HIVDIQLGVLGNRLARRRLTLDVSDAAREWLAMNGFDPVYGARPLRRLVQSSIGDQLAKE 833
Query: 824 LVREEIDENSTVYIDASPK 842
L+ + E TV +D P
Sbjct: 834 LLAGAVREGDTVRVDLDPS 852
>gi|56414627|ref|YP_151702.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62181233|ref|YP_217650.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|168262170|ref|ZP_02684143.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168464169|ref|ZP_02698086.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168822477|ref|ZP_02834477.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194443281|ref|YP_002041924.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194472869|ref|ZP_03078853.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736447|ref|YP_002115671.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197248685|ref|YP_002147563.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197363554|ref|YP_002143191.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198243260|ref|YP_002216671.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200388055|ref|ZP_03214667.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204929414|ref|ZP_03220488.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|224584513|ref|YP_002638311.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238909506|ref|ZP_04653343.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|375115573|ref|ZP_09760743.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|375120160|ref|ZP_09765327.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|409246359|ref|YP_006887066.1| Chaperone protein clpB 2 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416425230|ref|ZP_11692265.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416428136|ref|ZP_11693636.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416438592|ref|ZP_11699571.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416444260|ref|ZP_11703575.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416451863|ref|ZP_11708613.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416457253|ref|ZP_11712041.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416471313|ref|ZP_11719159.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416474725|ref|ZP_11720290.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416489037|ref|ZP_11726006.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416497226|ref|ZP_11729608.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416507694|ref|ZP_11735638.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416515027|ref|ZP_11738438.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416527361|ref|ZP_11743196.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416532861|ref|ZP_11745893.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416540936|ref|ZP_11750686.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416549265|ref|ZP_11755302.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416563432|ref|ZP_11762785.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416573080|ref|ZP_11767664.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416579681|ref|ZP_11771475.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416587188|ref|ZP_11775896.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416594256|ref|ZP_11780337.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416597887|ref|ZP_11782274.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416606432|ref|ZP_11787774.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416616636|ref|ZP_11794260.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416619236|ref|ZP_11794996.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416632441|ref|ZP_11801430.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416640766|ref|ZP_11805195.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416647656|ref|ZP_11808528.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416661132|ref|ZP_11815354.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416665644|ref|ZP_11816879.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416677945|ref|ZP_11822385.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416706416|ref|ZP_11831675.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416711904|ref|ZP_11835615.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416718100|ref|ZP_11840208.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416726683|ref|ZP_11846728.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416733321|ref|ZP_11850397.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416737812|ref|ZP_11852954.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416747220|ref|ZP_11858196.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416758177|ref|ZP_11863529.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416765406|ref|ZP_11868787.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416771063|ref|ZP_11872368.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|418482222|ref|ZP_13051245.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418492655|ref|ZP_13059136.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418497418|ref|ZP_13063838.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418500676|ref|ZP_13067070.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418504930|ref|ZP_13071283.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418510546|ref|ZP_13076826.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418524997|ref|ZP_13090981.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|418760238|ref|ZP_13316395.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418766415|ref|ZP_13322491.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418773353|ref|ZP_13329340.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418774360|ref|ZP_13330329.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418780080|ref|ZP_13335973.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418782674|ref|ZP_13338535.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418790107|ref|ZP_13345887.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418791658|ref|ZP_13347413.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418797885|ref|ZP_13353567.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418803885|ref|ZP_13359501.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|418805630|ref|ZP_13361212.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418809792|ref|ZP_13365341.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418817880|ref|ZP_13373362.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418823718|ref|ZP_13379125.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418833712|ref|ZP_13388630.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418838050|ref|ZP_13392905.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418841636|ref|ZP_13396454.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418846612|ref|ZP_13401380.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418851349|ref|ZP_13406062.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418856356|ref|ZP_13411002.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418865541|ref|ZP_13420018.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418865981|ref|ZP_13420446.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419786445|ref|ZP_14312172.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419792847|ref|ZP_14318477.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|421887443|ref|ZP_16318600.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|437829716|ref|ZP_20844238.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|440766164|ref|ZP_20945163.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|445141004|ref|ZP_21385209.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445157178|ref|ZP_21392909.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|452123537|ref|YP_007473785.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|56128884|gb|AAV78390.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62128866|gb|AAX66569.1| ATP-dependent protease, Hsp 100, part of novel multi-chaperone
system with DnaK, DnaJ, and GrpE [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|194401944|gb|ACF62166.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194459233|gb|EDX48072.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194711949|gb|ACF91170.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195633279|gb|EDX51693.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197095031|emb|CAR60577.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197212388|gb|ACH49785.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197937776|gb|ACH75109.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199605153|gb|EDZ03698.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204321133|gb|EDZ06333.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205341135|gb|EDZ27899.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205349068|gb|EDZ35699.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|224469040|gb|ACN46870.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|320087093|emb|CBY96861.1| Chaperone protein clpB 2 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|322614490|gb|EFY11421.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621445|gb|EFY18298.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624306|gb|EFY21139.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629395|gb|EFY26173.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633635|gb|EFY30377.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322638322|gb|EFY35020.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322639760|gb|EFY36443.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647378|gb|EFY43874.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650452|gb|EFY46862.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322656055|gb|EFY52355.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661449|gb|EFY57674.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662649|gb|EFY58857.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667022|gb|EFY63197.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671391|gb|EFY67514.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322677602|gb|EFY73665.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681572|gb|EFY77602.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322683972|gb|EFY79982.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322715719|gb|EFZ07290.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|323195541|gb|EFZ80719.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197914|gb|EFZ83037.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203092|gb|EFZ88124.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323210517|gb|EFZ95401.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323218202|gb|EGA02914.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221532|gb|EGA05945.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323230965|gb|EGA15083.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234683|gb|EGA18769.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238722|gb|EGA22772.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323241421|gb|EGA25452.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246881|gb|EGA30848.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253280|gb|EGA37110.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257076|gb|EGA40785.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260451|gb|EGA44062.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264492|gb|EGA47998.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269627|gb|EGA53080.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326624427|gb|EGE30772.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|363553272|gb|EHL37528.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363556032|gb|EHL40250.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363564474|gb|EHL48522.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363569331|gb|EHL53293.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363569941|gb|EHL53886.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363571863|gb|EHL55763.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363572447|gb|EHL56339.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366054678|gb|EHN19026.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366055874|gb|EHN20208.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366064955|gb|EHN29152.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366068546|gb|EHN32686.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366069829|gb|EHN33950.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366076744|gb|EHN40780.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366830316|gb|EHN57188.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372207197|gb|EHP20697.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|379982933|emb|CCF90873.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|392618124|gb|EIX00536.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392621684|gb|EIX04034.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392730160|gb|EIZ87410.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392738004|gb|EIZ95154.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392742866|gb|EIZ99943.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392750562|gb|EJA07524.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392751172|gb|EJA08127.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392759168|gb|EJA16024.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392759665|gb|EJA16513.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392767929|gb|EJA24689.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392770497|gb|EJA27223.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392772233|gb|EJA28936.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|392783589|gb|EJA40207.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392784383|gb|EJA40984.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392785709|gb|EJA42280.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392786838|gb|EJA43387.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392794914|gb|EJA51300.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392797356|gb|EJA53673.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392808313|gb|EJA64364.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392810065|gb|EJA66091.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392817795|gb|EJA73699.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392819681|gb|EJA75539.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392827764|gb|EJA83465.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392840829|gb|EJA96363.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|435303916|gb|ELO79738.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|436423564|gb|ELP21374.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|444846612|gb|ELX71773.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|444851725|gb|ELX76812.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|451912541|gb|AGF84347.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 857
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/854 (51%), Positives = 592/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S+ L++V+ + GD ++ + +L LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ VL V ++FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ + ++A+
Sbjct: 836 GELVPGKVIRLEAN 849
>gi|340754335|ref|ZP_08691092.1| chaperone ClpB [Fusobacterium sp. 2_1_31]
gi|229423856|gb|EEO38903.1| chaperone ClpB [Fusobacterium sp. 2_1_31]
Length = 858
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/860 (49%), Positives = 605/860 (70%), Gaps = 36/860 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+P++FT T AI +A +++ P LA+ LL G+ + I N +
Sbjct: 2 MSPNQFTENTITAINLAVDISKGNMQQSIRPEALALGLLMQNDGLIPRVIEKMNLNLKYI 61
Query: 59 AQSAERVFNQAMK---KLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
E+ N K K+ ++ + D+ S ++ RA+ K D+ L+V+ +
Sbjct: 62 ISELEKEMNNYPKVEVKVSNENISLDQKTNS-----ILNRAEMIMKEMEDSFLSVEHIFK 116
Query: 116 GLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++E+ I FK+ G+++ + + +RG RKV++ + + T++ L+ Y +DLVE A
Sbjct: 117 AMIEEMPI---FKKLGISLEKYMEVLMSIRG--NRKVDNQNPEATYEVLEKYAKDLVELA 171
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GK+DP+IGRD EIRR ++I+SRRTKN+P+LIGEPGVGKTA+VEGLAQRI+ GDVP +L
Sbjct: 172 REGKMDPIIGRDSEIRRAIQIISRRTKNDPILIGEPGVGKTAIVEGLAQRILNGDVPESL 231
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ ++ +LDMGALVAGAKY+GEFEER+K VLKEVEE+ G +ILFIDEIH ++GAG+ EGS
Sbjct: 232 KNKKIFSLDMGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGS 291
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
+DA N+ KPMLARG+LR IGATT++EYRKY+EKD A ERRFQ + V EP+V DT+SILRG
Sbjct: 292 LDAGNMLKPMLARGELRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNVDDTISILRG 351
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LK+K+E +HGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +R ++DS PEE+
Sbjct: 352 LKDKFETYHGVRITDTAIVEAATLSQRYITDRKLPDKAIDLIDEAAAMIRTEIDSMPEEL 411
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L RK +QLEIE+ ALEKE D ASK RL + KEL +L ++ + L +++ EKE I +I
Sbjct: 412 DQLTRKALQLEIEIKALEKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDIAKI 471
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLT 529
+ +K++ E + +++AER YDL + ++L+YG + +E + Q + N+ D EN +L
Sbjct: 472 KNIKREIENVKLEMEKAEREYDLTKLSELKYGKLATLEKEL-QEQQNKVDKDGKENSLLK 530
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSR 578
+ V D+IA++VSRWTGIPV++L + +KE+++ G EAV AVA+++LRS
Sbjct: 531 QEVTADEIADIVSRWTGIPVSKLTETKKEKMLHLEDHIKERVKGQDEAVKAVADTMLRSV 590
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P GSF+FLGPTGVGKT LAK LA LFD E+ +VRIDMSEYM++ SV+RLIG
Sbjct: 591 AGLKDPNRPMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDNVVRIDMSEYMDKFSVTRLIG 650
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEA+R +PYSV+LFDE+EKAH VFN LLQVLDDGRLTDGQGR VD
Sbjct: 651 APPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVD 710
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F+NT+IIMTSN+G+ HL+ + + R++V E++ F+PE LNR+DEI+ F L
Sbjct: 711 FKNTLIIMTSNIGS-HLI--LEDPALSESTREKVADELKARFKPEFLNRIDEIITFKALD 767
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++++ +L +KD+ +L + + L +D +D + +YDP YGARP+RR++++++ T
Sbjct: 768 LPAIKEIVKLSLKDLENKLKPKHITLEFSDKMVDYLANNAYDPHYGARPLRRYIQREIET 827
Query: 819 ELSRMLVREEIDENSTVYID 838
L++ ++ E+ E S V ID
Sbjct: 828 SLAKKILANEVHEKSNVLID 847
>gi|154488139|ref|ZP_02029256.1| hypothetical protein BIFADO_01710 [Bifidobacterium adolescentis
L2-32]
gi|154083612|gb|EDN82657.1| ATP-dependent chaperone protein ClpB [Bifidobacterium adolescentis
L2-32]
Length = 909
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/880 (51%), Positives = 610/880 (69%), Gaps = 45/880 (5%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT EA++ A + A + G+ Q LHL A+L + + I AGG SAE
Sbjct: 8 KFTQMAQEALSDAVQNAAALGNPQVDTLHLLDAMLRQENSMARALIEAAGGNAQNVSAE- 66
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
+QAM+ LPS + + P S L V+ +A+ + GD ++ VD +++ + + +
Sbjct: 67 -VHQAMQSLPSASGSTTTQPDVSRQLSAVLSQAEKEMQRRGDEYVTVDLMLVAIAAAKPN 125
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q D+ ++ G+ ++++ + RG + RKV SA + +++AL+ Y DL A GKLD
Sbjct: 126 QSADILEKNGLTADKLRNALTAARGSD-RKVTSADAEGSYKALEKYSTDLTAAAKEGKLD 184
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + +LI
Sbjct: 185 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLI 244
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL+E+++A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 245 SLDLGSMVAGSKYRGEFEERLKSVLEEIKKADGQIITFIDEIHTIVGAGAAEGSMDAGNM 304
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DTV+ILRG+ KYE
Sbjct: 305 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTVAILRGIAPKYE 364
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L R+
Sbjct: 365 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELRRQ 424
Query: 420 RMQLEIELHAL-------------EKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKE 466
+L++E L E E D ++K RL ++ +E+ D +KL L R+ E
Sbjct: 425 VDRLKMEKSYLLGNPKNDKAAEKAEAELDDSAKDRLADLNQEIADKSEKLNGLKARWDAE 484
Query: 467 KERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN- 525
K + I L++K +EL ++ ER DLA+++ + YG I ++ I Q E N+++
Sbjct: 485 KNGHNRIGDLRKKLDELRTQAEKYEREGDLAKSSAINYGEIPAIQKEIAQAEKNEAESGG 544
Query: 526 --------LMLTETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEA 566
M+ + V D IAE+VS WTGIPV RL G+NEK +R+IG EA
Sbjct: 545 ADNANADVPMVPDRVDADSIAEIVSDWTGIPVGRLMQGENEKLLHMEEYLGKRVIGQKEA 604
Query: 567 VNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSE 626
+ AV+++V RSRAG+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSE
Sbjct: 605 IQAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSE 664
Query: 627 YMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDD 686
YME+ SVSRLIGA PGY+G+EEGGQLTEAVRRRPYSVVLFDEVEKA+ VF+ LLQVLDD
Sbjct: 665 YMEKASVSRLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDD 724
Query: 687 GRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLN 746
GRLTDGQGRTVDF+NT++IMTSNLG++ L++ M + V+ V F+PE +N
Sbjct: 725 GRLTDGQGRTVDFKNTILIMTSNLGSQFLVNPDM---DADAKKKAVMDAVHMQFKPEFIN 781
Query: 747 RLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGAR 806
RLDE+V+F PL+ E+L + +Q+ V+ RL +R + L VTD+A + + YDP YGAR
Sbjct: 782 RLDELVMFHPLTREELGGIVDIQVAQVSARLTDRRITLDVTDSAREWLANTGYDPAYGAR 841
Query: 807 PIRRWLEKKVVTELSRMLVREEIDENSTVYIDASPKGDNL 846
P+RR ++ +V +L+RML+ E+ + TV +D + GD+L
Sbjct: 842 PLRRLVQTEVGDQLARMLLAGEVHDGDTVLVDQT-GGDHL 880
>gi|260578525|ref|ZP_05846437.1| chaperone protein ClpB [Corynebacterium jeikeium ATCC 43734]
gi|258603364|gb|EEW16629.1| chaperone protein ClpB [Corynebacterium jeikeium ATCC 43734]
Length = 878
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/856 (52%), Positives = 593/856 (69%), Gaps = 38/856 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T T A+ A + A++ G+ P HL VALL I + AG E Q
Sbjct: 4 FNP---TTMTQSAMQAALQDASAKGNPDIRPAHLLVALLEQEDSIALPVLQAAGVE--PQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ + P T + P + + + AQ + GDT+++ + L+ G+ +
Sbjct: 59 TISVKAKNLVAGYPQATGSEMANPQFNRDALNALTAAQELAEQLGDTYVSTEVLLAGIAK 118
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+S + +AG ++ E +RG RKV + + FQAL+ Y DL +A G
Sbjct: 119 GNSDAAKVMHDAGATFEAIRGAFESVRGN--RKVTTEEPEGQFQALEKYSTDLTARAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DPVIGRD+EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLA+RIV GDVP +L
Sbjct: 177 KIDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLRGK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMD 295
+LI+LD+G++VAGAKYRGEFEERLKAVL E++EAEG+VI FIDE+H ++GAG + +MD
Sbjct: 237 KLISLDLGSMVAGAKYRGEFEERLKAVLDEIKEAEGEVITFIDELHTIVGAGAGGDSAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KP+LARG+LR +GATTL+EYRKY+EKDAA ERRFQQVYV EPS DT+ ILRGLK
Sbjct: 297 AGNMIKPLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVYVGEPSAEDTIGILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEEIDN
Sbjct: 357 ERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDN 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ER +LEIE ALEKE D ASK RL +R EL D ++KL L R++ EK ID +R
Sbjct: 417 VERVVRRLEIEEMALEKETDAASKDRLERLRSELADEKEKLAGLTARWENEKGSIDSLRE 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTETVG 533
LK++ + L + AER + A+ A+LRYG I +VE + + E + E +MLTE V
Sbjct: 477 LKEELDNLRRESEIAEREGNFAKVAELRYGHIPDVEKKLAEAEETVAEQQEGMMLTEEVT 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
PD IA+VVS WTG+P ++ Q E E+L +G AV+AV+++V R+RAG+
Sbjct: 537 PDTIADVVSAWTGVPAGKMLQGETEKLLNMELVLGGRVVGQHRAVDAVSDAVRRARAGVA 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEY E+HSV+RL+GAPPG
Sbjct: 597 DPNRPTGSFLFLGPTGVGKTELAKALADFLFDDETAMVRIDMSEYGEKHSVARLVGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++ GGQLTEAVRRRPY+VVLFDEVEKAH VF+ LLQVLD+GRLTDGQGRTVDFRNT
Sbjct: 657 YVGYDAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNT 716
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++I+TSNLGA ++V++ V++ F+PE +NRLD++++FDPLS EQL
Sbjct: 717 ILILTSNLGAGG-------------TDEEVMEAVKRAFKPEFINRLDDVLIFDPLSAEQL 763
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ + +Q+ +A RLA R + L VTD A + YDP YGARP+RR ++K + +L++
Sbjct: 764 KSIVSIQVGALAERLAARRLILDVTDDAQSWLAEHGYDPAYGARPLRRLIQKAIGDQLAK 823
Query: 823 MLVREEIDENSTVYID 838
L+ E+ + TV +D
Sbjct: 824 KLLAGEVRDGDTVRVD 839
>gi|354807551|ref|ZP_09041015.1| ATP-dependent chaperone ClpB [Lactobacillus curvatus CRL 705]
gi|354513941|gb|EHE85924.1| ATP-dependent chaperone ClpB [Lactobacillus curvatus CRL 705]
Length = 861
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/871 (52%), Positives = 607/871 (69%), Gaps = 36/871 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP++ T +A+A A ++A + + HL L P + Q AG + A
Sbjct: 1 MNPEQMTQAVQDALAEAQKIAMTRHQTEIDIPHL-FKYLVQPQQLGRQIYQEAGADIDAL 59
Query: 61 SAERVFNQAMKKLPS---QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
AE ++ + +P+ QT I S L +V+ A+ + D L+ + +ILGL
Sbjct: 60 EAE--IDREIDAIPTVEGQTNYGQNI--SQNLYQVLTAAEKYKTEFQDEFLSTETVILGL 115
Query: 118 --LEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE-- 173
L+ + ++ V ++K + LRG G +V S + + +QAL+ YG DL++
Sbjct: 116 MGLKYQALVQYLQKQNVTEQKLKKVITDLRG--GERVTSKNQEDNYQALEKYGTDLIKAV 173
Query: 174 QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
++GK+DPVIGRDEEIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP NL
Sbjct: 174 RSGKMDPVIGRDEEIRDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPDNL 233
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +I+LDMG L+AGAKYRGEFEERLKAVLKEV+++EG++++FIDEIH ++GAG+TEGS
Sbjct: 234 KDKTIISLDMGTLIAGAKYRGEFEERLKAVLKEVKKSEGRILVFIDEIHTIVGAGKTEGS 293
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA NL KPMLARG+L IGATTL+EYR+ +EKD A ERRFQ+V V EPSV DT+SILRG
Sbjct: 294 MDAGNLLKPMLARGELHMIGATTLDEYRQNIEKDKALERRFQKVLVQEPSVEDTISILRG 353
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKE++E HGVRI D ALV AA LS RYIT R LPDKAIDLVDEA AN+ V+++SQP E+
Sbjct: 354 LKERFEIFHGVRIHDNALVAAATLSNRYITDRFLPDKAIDLVDEASANINVEMNSQPTEL 413
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D R+ MQLEIE AL+KE D AS+ RL E +K+L DLR+ L MR++ EKE ++
Sbjct: 414 DQATRQLMQLEIEEEALKKETDAASQKRLAETQKQLADLRETTNNLKMRWETEKE---DL 470
Query: 474 RRLKQKREELLFA---LQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTE 530
R+ K+ E+ A L+EA+ YDL AA L++G I ++E + LE + E+ M+ E
Sbjct: 471 NRINDKKAEIDAAKRQLEEAQGNYDLETAAKLQHGTIPQLEEDLADLEKAEKPEDWMVQE 530
Query: 531 TVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRA 579
+V ++IA VVS TGIPV +L G +K ER+IG +AVNAV ++VLRSRA
Sbjct: 531 SVTENEIATVVSSQTGIPVAKLVAGDRQKLLRLADVLHERVIGQDQAVNAVTDAVLRSRA 590
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P GSFLFLGPTGVGKTELAKALAE LFD E +VRIDMSEYME++SVSRL+GA
Sbjct: 591 GLQNPDRPLGSFLFLGPTGVGKTELAKALAEDLFDSERHMVRIDMSEYMEKYSVSRLVGA 650
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PGYVG+EEGGQLTEAVRR PY++VL DE+EKAH VFN LLQVLDDGRLTD QGRTVDF
Sbjct: 651 APGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVDF 710
Query: 700 RNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
+NT+IIMTSNLG+E LL G+ G+V+ Q A++ V ++ F+PE LNR+D+ ++F PL
Sbjct: 711 KNTIIIMTSNLGSEILLDGVDEEGQVS-QTAKESVQALIQTKFKPEFLNRIDDTIMFTPL 769
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
S ++ + + D++ RL+++ + L ++DAA V E YDP +GARP+RR++ +
Sbjct: 770 SLNDIQAIVVKMLHDLSDRLSDQELTLTISDAAKQWVAEEGYDPAFGARPLRRFITNHIE 829
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVY 848
T L++ ++ + +TV I+ K + LV+
Sbjct: 830 TPLAKEIIAGHMLPGTTVEINL--KDNQLVF 858
>gi|336432739|ref|ZP_08612570.1| chaperone ClpB [Lachnospiraceae bacterium 2_1_58FAA]
gi|336018021|gb|EGN47774.1| chaperone ClpB [Lachnospiraceae bacterium 2_1_58FAA]
Length = 865
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/857 (50%), Positives = 610/857 (71%), Gaps = 27/857 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + +A+ ++A G+ + HL AL++ + + + +
Sbjct: 1 MNINKFTQNSMQAVQNCEKIAYDYGNQELAQEHLLYALVTQDESLILKLLEKMSIQGP-- 58
Query: 61 SAERVFNQAMKKLPSQTPAPD--EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+F +++L ++ P ++ L + A+ K GD +++V+ + L LL
Sbjct: 59 ----LFINRVEELLNKRPKVQGGQVFVGQDLNNALIHAEDEAKQMGDEYVSVEHIFLSLL 114
Query: 119 EDSQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+ + + LF+E G++ + +RG + +V S + + T+ L YG+DLVE+A
Sbjct: 115 KYASRDLKPLFREFGISREGFLHALSTVRGNQ--RVTSDNPEATYDTLNKYGQDLVERAR 172
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
KLDPVIGRDEEIR V+RILSR+TKNNPVLIGEPGVGKTA VEGLAQRIV GDVP L
Sbjct: 173 DQKLDPVIGRDEEIRNVIRILSRKTKNNPVLIGEPGVGKTAAVEGLAQRIVSGDVPEGLK 232
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D + ALDMGALVAGAKYRGEFEERLKAVL+EV+ ++GK+ILFIDE+H ++GAG+T+G+M
Sbjct: 233 DKTIFALDMGALVAGAKYRGEFEERLKAVLEEVKNSDGKIILFIDELHTIVGAGKTDGAM 292
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ V V EPSV D +SILRGL
Sbjct: 293 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVMVEEPSVEDAISILRGL 352
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HGV+I D ALV AA LS RYI+ R LPDKAIDLVDEACA ++ +LDS P E+D
Sbjct: 353 KERYEVFHGVKITDSALVAAATLSNRYISDRFLPDKAIDLVDEACALIKTELDSMPTELD 412
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L R+ MQLEIE AL+KE+D+ S+ RL +++EL L+++ ++++ EK ++ ++
Sbjct: 413 ELRRRVMQLEIEEEALKKEEDRLSRERLEHLQEELAGLKEEYAGKKVQWENEKTSVERVQ 472
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLT-ETVG 533
+++++ E++ +Q+A+R YDL +AA+L+YG + +++ + + E ++L L E V
Sbjct: 473 KVREEIEQVNKEIQKAQREYDLNKAAELQYGRLPQLQKQLEEEEEKVKAKDLSLVHEAVT 532
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
++IA ++SRWTGIPV +L ++E+ R+IG E V V E+++RS+AG+
Sbjct: 533 DEEIARIISRWTGIPVAKLNESERSKTLHLGDELHRRVIGQDEGVELVTEAIIRSKAGIK 592
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTELAKALA+ LFDDEN +VRIDMSEYME++SVSRLIGAPPG
Sbjct: 593 DPTKPIGSFLFLGPTGVGKTELAKALAQSLFDDENNMVRIDMSEYMEKYSVSRLIGAPPG 652
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGGQLTEAVRR+PYSVVLFDE+EKAH VFN LLQVLDDGR+TD QGRTVDF+NT
Sbjct: 653 YVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNT 712
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVA-RDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
++IMTSN+GA +LL G+ T++ + ++ V+ ++R HFRPE LNRLDEI++F PL+
Sbjct: 713 ILIMTSNIGANYLLEGIREDGTIEESNQNLVMNDLRAHFRPEFLNRLDEIIMFKPLTKSN 772
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ + L +KDV RLA++ +++ +TDAA + V+ YDP+YGARP++R+L+K V T +
Sbjct: 773 IHAIIDLLVKDVNKRLADKELSIELTDAAKNFVVEGGYDPMYGARPLKRYLQKNVETLAA 832
Query: 822 RMLVREEIDENSTVYID 838
++++ + + ID
Sbjct: 833 KLILAGNVGRGDRIEID 849
>gi|163759874|ref|ZP_02166958.1| putative chaperone ClpB (heat-shock protein) [Hoeflea phototrophica
DFL-43]
gi|162282832|gb|EDQ33119.1| putative chaperone ClpB (heat-shock protein) [Hoeflea phototrophica
DFL-43]
Length = 853
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/841 (53%), Positives = 585/841 (69%), Gaps = 22/841 (2%)
Query: 25 GHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAERVFNQAMKKLPSQTPAPDEIP 84
GH QF P HL L+ D G+ + I AGG A + A+ KLP + ++
Sbjct: 4 GHQQFVPEHLLKVLMDDDQGMASSLIERAGGRPA--DVRLANDAALAKLPKVSGGNGQLY 61
Query: 85 ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ--IGDLFKEAGVAVARVKSEVE 142
S + KV + A+ A K GD+ + V++L+L L +S +AG+ + +
Sbjct: 62 LSQPMAKVFQTAEDAAKKAGDSFVTVERLLLALAIESSAATSKTLSKAGLTAQALNQTIN 121
Query: 143 KLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTK 200
++R +GR +SA + F ALK Y RDL + A GKLDPVIGRD+EIRR +++LSRRTK
Sbjct: 122 EIR--KGRTADSAGAEQGFDALKKYARDLTQAARDGKLDPVIGRDDEIRRTIQVLSRRTK 179
Query: 201 NNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERL 260
NNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D L+ALDMGAL+AGAKYRGEFEERL
Sbjct: 180 NNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKELMALDMGALIAGAKYRGEFEERL 239
Query: 261 KAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEY 320
KAVL E++ G++ILFIDE+H ++GAG+ +G+MDA+NL KP LARG+L C+GATTL+EY
Sbjct: 240 KAVLSEIQANNGEIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEY 299
Query: 321 RKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSAR 380
RK+VE+DAA RRFQ V V EPSV DTVSILRGLKEKYE HH VR+ D ALV AA LS R
Sbjct: 300 RKHVEQDAALARRFQPVMVEEPSVEDTVSILRGLKEKYEQHHKVRVSDSALVSAAVLSNR 359
Query: 381 YITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKA 440
YIT R LPDKAIDLVDE+ A +R+Q+DS+PEE+D L+R+ MQL+IE AL+KE D+ASK
Sbjct: 360 YITDRFLPDKAIDLVDESAARLRMQVDSKPEELDELDRRIMQLKIEREALKKEADQASKD 419
Query: 441 RLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAA 500
RL + +EL D+ +K L R++ EK+++ +K + EE L A+R+ + RA
Sbjct: 420 RLERLERELSDIEEKSDALTARWQSEKQKLGLAADIKLQLEEARNELAIAQRKGEFQRAG 479
Query: 501 DLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL 560
+L YG I +E + + E + + M+ ETV PD IA +VSRWTGIPV R+ + E+++L
Sbjct: 480 ELAYGEIPALEQQLVEAEAHGEADTGMVEETVTPDHIAHIVSRWTGIPVDRMLEGERDKL 539
Query: 561 -----------IGLAEAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALA 609
IG EAV AV+++V R+RAGL P +P GSF+FLGPTGVGKTEL KALA
Sbjct: 540 LRMEDEIGKRVIGQGEAVQAVSKAVRRARAGLQDPNRPMGSFIFLGPTGVGKTELTKALA 599
Query: 610 EQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEV 669
E LFDDE L+R+DMSEYME+HSV+RLIGAPPGYVG++EGG LTEAVRRRPY V+LFDE+
Sbjct: 600 EFLFDDETALIRMDMSEYMEKHSVARLIGAPPGYVGYDEGGALTEAVRRRPYQVILFDEI 659
Query: 670 EKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVAR 729
EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I+MTSNLGAE+L++ + AR
Sbjct: 660 EKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNLGAEYLVA-LGEDQDADAAR 718
Query: 730 DQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDA 789
D V+ VR FRPE LNR+DEI++F L ++ + +Q+ + LA+R + +A+ D
Sbjct: 719 DDVMNVVRSAFRPEFLNRVDEIILFHRLRRSEMGAIVDIQLGRLGKLLADRKIEVALDDP 778
Query: 790 ALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
A D + + YDP YGARP++R ++K V L+ L+ E+ + + V + A D L++
Sbjct: 779 ARDWLAEKGYDPAYGARPLKRVVQKYVQDPLAEKLLMGEVGDGAKVSVSAG--SDRLLFS 836
Query: 850 V 850
V
Sbjct: 837 V 837
>gi|148242005|ref|YP_001227162.1| chaperone ClpB [Synechococcus sp. RCC307]
gi|147850315|emb|CAK27809.1| Chaperone ClpB [Synechococcus sp. RCC307]
Length = 863
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/787 (53%), Positives = 585/787 (74%), Gaps = 20/787 (2%)
Query: 70 MKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG-DLFK 128
+++ PS + APD + L ++ +A+ ++ GD++++++ L+L L DS+ G L
Sbjct: 70 LQRQPSLSTAPDNVYLGKGLQSLLEQAERNKQEFGDSYISIEHLLLALAGDSRCGRQLLL 129
Query: 129 EAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDE 186
+ GV ++ ++ +RG + +V + + T+++L+ YGRDL A GKLDPVIGRDE
Sbjct: 130 DNGVQDKTLREAIQAVRGSQ--RVTDQNPEGTYESLQKYGRDLTAAARDGKLDPVIGRDE 187
Query: 187 EIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGAL 246
EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVPS L + +LIALDMGAL
Sbjct: 188 EIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPSALQNRQLIALDMGAL 247
Query: 247 VAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLAR 306
+AGAKYRGEFEERLKAVLKEV ++G+++LFIDEIH V+GAG T G+MDA+NL KPMLAR
Sbjct: 248 IAGAKYRGEFEERLKAVLKEVTSSDGQIVLFIDEIHTVVGAGATGGAMDASNLLKPMLAR 307
Query: 307 GQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRI 366
G+LRCIGATTL+E+R+++EKD A ERRFQQV+V +P+V DT+SILRGLKE+YE HHGVRI
Sbjct: 308 GELRCIGATTLDEHRQHIEKDPALERRFQQVFVDQPTVEDTISILRGLKERYEVHHGVRI 367
Query: 367 QDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIE 426
D ALV AA LS+RYI R LPDKAIDLVDE+ A +++++ S+PEEID ++RK +QLE+E
Sbjct: 368 ADTALVAAAVLSSRYIADRFLPDKAIDLVDESAARLKMEITSKPEEIDEIDRKILQLEME 427
Query: 427 LHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREELLFA 486
+L +E D AS RL + +EL +L ++ L +++KEK ID ++ LK++ E++
Sbjct: 428 KLSLGRESDSASLERLERIERELAELAEQQSSLNAQWQKEKGAIDALQSLKEEIEQVQLQ 487
Query: 487 LQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTETVGPDQIAEVVS 542
+++A+R YDL +AA+L YG + E +E++ +L ++ + N +L E V D IAEV++
Sbjct: 488 VEQAKRNYDLNKAAELEYGTMAELNRQLESSEAELAASEGEANQLLREEVTEDDIAEVIA 547
Query: 543 RWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGRPQQPTGSF 591
+WTGIPV++L ++E +R+IG +AV AVA+++ RSRAGL P++P SF
Sbjct: 548 KWTGIPVSKLARSEMEKLLELEEHLHQRVIGQGDAVRAVADAIQRSRAGLSDPRRPIASF 607
Query: 592 LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQ 651
LFLGPTGVGKTEL+KALA QLFD ++ +VRIDMSEYME+H+VSRLIGAPPGYVG EEGGQ
Sbjct: 608 LFLGPTGVGKTELSKALANQLFDSDDAMVRIDMSEYMEKHAVSRLIGAPPGYVGFEEGGQ 667
Query: 652 LTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLG 711
LTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TD QGRTVDF NTV+I+TSN+G
Sbjct: 668 LTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDSQGRTVDFTNTVLILTSNIG 727
Query: 712 AEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMK 771
++ +L ++V + +R HFRPE LNRLDE ++F L ++LR + LQ++
Sbjct: 728 SQSILDLGGDDSRHSEMEERVNEALRAHFRPEFLNRLDETIIFHSLRADELRHIVDLQVQ 787
Query: 772 DVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDE 831
+A RLAER + L ++ A D + YDP+YGARP++R +++++ T +++ ++ E
Sbjct: 788 RLAQRLAERKIQLELSARASDWLATAGYDPVYGARPLKRAIQRELETPIAKAILAGRYSE 847
Query: 832 NSTVYID 838
ST +D
Sbjct: 848 GSTAAVD 854
>gi|443311162|ref|ZP_21040795.1| ATP-dependent chaperone ClpB [Synechocystis sp. PCC 7509]
gi|442778802|gb|ELR89062.1| ATP-dependent chaperone ClpB [Synechocystis sp. PCC 7509]
Length = 879
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/860 (50%), Positives = 612/860 (71%), Gaps = 32/860 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
+P+KFT K +AI + ++A + Q HL +ALL +P+ + + + AG E +
Sbjct: 5 DPNKFTDKAWDAIVKSQDIARNYLQQQLDVEHLVLALL-EPNELGDRILTKAGIELSR-- 61
Query: 62 AERVFNQAMKKLPSQTPA---PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
F Q + + P +++ +L ++ RA+AA+ D ++++ ++LG
Sbjct: 62 ----FQQQLDAFTQRQPKIGKSEQLYLGRSLDLLLDRAEAARAKMEDEFISIEHILLGFA 117
Query: 119 EDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D +IG L+K + A++++ ++ +RG + KV + ++ +QAL+ +GRDL EQA
Sbjct: 118 QDDRIGRRLYKTFNLDTAKLEAAIQTVRGSQ--KVTDQTPESRYQALEKFGRDLTEQAKN 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRRV+++LSRR+KNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP NL +
Sbjct: 176 GKLDPVIGRDEEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPENLKN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LI+LDMG+L+AGAKYRGEFE+RL++VLKEV + G+++LFIDE+H V+GAG ++G+MD
Sbjct: 236 RQLISLDMGSLIAGAKYRGEFEDRLRSVLKEVTGSNGQIVLFIDELHTVVGAGASQGTMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV EP+V T+SILRGLK
Sbjct: 296 AGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVNEPTVETTISILRGLK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
++YE HH V+I D +LV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+P E++
Sbjct: 356 QRYEVHHSVKITDSSLVAAATLSNRYISDRFLPDKAIDLVDEAAAQLKMEITSKPSELEA 415
Query: 416 LERKRMQLEIELHALEKEKDKA--SKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
++R+ MQLE+E +L E +A +K RL +++E+ L +K Q +++ EK+ +D I
Sbjct: 416 IDRRIMQLEMEKLSLAGEDQRAVTTKERLDRIQQEIASLTEKQQEFNNQWQGEKQILDAI 475
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLT 529
LK++ + L +++AER YDL AA L+YG ++ V EA +L Q+ + +L
Sbjct: 476 STLKKQEDSLRVQIEQAERAYDLNTAAQLKYGQLEGVQHDREAKEAKLLEIQTQGSTLLR 535
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSR 578
E V IAE+V++WTGIPV RL ++E+ ER+IG EAV AV+ ++ R+R
Sbjct: 536 EEVTEADIAEIVAKWTGIPVNRLLESERQKLLQLESHLHERVIGQTEAVEAVSAAIRRAR 595
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSFLF+GPTGVGKTELA+ALA+ LFD ++ LVR+DMSEYME+HSVSRL+G
Sbjct: 596 AGMKDPGRPIGSFLFMGPTGVGKTELARALAQFLFDADDALVRLDMSEYMEKHSVSRLVG 655
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQL+EAVRRRPYSVVL DEVEKAH VFN LLQVLDDGR+TD QGRTVD
Sbjct: 656 APPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVD 715
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
FRN+VI+MTSN+G+EH+L + +VL +R HFRPE LNR+D+I++F L+
Sbjct: 716 FRNSVIVMTSNIGSEHILDVAGDDRKYDQMQTKVLDALRSHFRPEFLNRVDDIILFHTLN 775
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
+LR++ +Q+K V LA++ ++L ++ ALD + YDP+YGARP++R ++K++
Sbjct: 776 RSELRQIVAIQIKRVMNLLADQKISLELSSPALDFLAEAGYDPVYGARPLKRAIQKQIEN 835
Query: 819 ELSRMLVREEIDENSTVYID 838
L+ L+ E T+ +D
Sbjct: 836 PLATKLLENTFTEGDTILVD 855
>gi|23465812|ref|NP_696415.1| protease of ClpA/ClpB type [Bifidobacterium longum NCC2705]
gi|189440447|ref|YP_001955528.1| ATP-binding subunit of Clp protease [Bifidobacterium longum DJO10A]
gi|322691967|ref|YP_004221537.1| Clp protease [Bifidobacterium longum subsp. longum JCM 1217]
gi|419850666|ref|ZP_14373646.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 35B]
gi|419851613|ref|ZP_14374539.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 2-2B]
gi|419855793|ref|ZP_14378541.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 44B]
gi|54035860|sp|Q8G4X4.1|CLPB_BIFLO RecName: Full=Chaperone protein ClpB
gi|23326506|gb|AAN25051.1| protease of ClpA/ClpB type [Bifidobacterium longum NCC2705]
gi|189428882|gb|ACD99030.1| ATP-binding subunit of Clp protease [Bifidobacterium longum DJO10A]
gi|320456823|dbj|BAJ67445.1| Clp protease [Bifidobacterium longum subsp. longum JCM 1217]
gi|386408508|gb|EIJ23418.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 35B]
gi|386413330|gb|EIJ27943.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 2-2B]
gi|386414746|gb|EIJ29292.1| ATP-dependent chaperone protein ClpB [Bifidobacterium longum subsp.
longum 44B]
Length = 889
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/863 (52%), Positives = 603/863 (69%), Gaps = 35/863 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT EA+ A + A++AG+AQ LH+ ALL +G+ I AGG+ A A
Sbjct: 4 KFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDPQAIGA-- 61
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
A+ LPS + + P AS L I +A+ + GD +++ + L++G+ + +
Sbjct: 62 AVRNALVALPSASGSSTSQPQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q ++ ++ GV A ++ V +RG G KV S + +++AL+ Y DL A GKLD
Sbjct: 122 QSAEILEKNGVTAASLRKAVPGVRG--GAKVTSPDAEGSYKALEKYSTDLTAAAKEGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L +LI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQGKKLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL E++ A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 240 SLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 300 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L+RK
Sbjct: 360 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ E+ +++ L+ K
Sbjct: 420 VTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAK 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAI-----------GQLEGNQSDENLML 528
++L + R +LA A+ + YG I ++ + N +DE M+
Sbjct: 480 LDDLRVQADKYTREGNLAEASKILYGEIPSIQKELAAAESADAESADASAANPADEP-MV 538
Query: 529 TETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRS 577
+ V D +AE+VS WTGIPV RL G+NEK +R+IG EA+ AV+++V RS
Sbjct: 539 PDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRS 598
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAG+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLI
Sbjct: 599 RAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLI 658
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GA PGYVG+E+GGQLTEAVRRRPYSVVLFDEVEKA+ +F+ LLQVLDDGRLTDGQGRTV
Sbjct: 659 GAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+NT++IMTSNLG++ L++ M + V+ V +F+PE LNRLD+IV+F PL
Sbjct: 719 DFKNTILIMTSNLGSQFLVNEDM---DADAKKKAVMDAVHMNFKPEFLNRLDDIVMFHPL 775
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ E+L + +Q+ V+ RL +R + L VTD+A + + YDP YGARP+RR ++ +V
Sbjct: 776 TREELGGIVDIQVAGVSQRLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVG 835
Query: 818 TELSRMLVREEIDENSTVYIDAS 840
+L+RML+ ++ + TV +D +
Sbjct: 836 DQLARMLLAGKVHDGDTVLVDQT 858
>gi|421894226|ref|ZP_16324716.1| ATP-dependent chaperone ClpB [Pediococcus pentosaceus IE-3]
gi|385272770|emb|CCG90088.1| ATP-dependent chaperone ClpB [Pediococcus pentosaceus IE-3]
Length = 863
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/874 (50%), Positives = 620/874 (70%), Gaps = 38/874 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP+K T EAI+ A ++A + H + L L+ P + + + +N
Sbjct: 1 MNPEKMTTALQEAISEAQQIAVNRQHQEIGVPEL-FKFLTQPDQLVGTLLTDLKIDNNLV 59
Query: 61 SAERVFNQAMKKLP----SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILG 116
E +Q ++++ SQ I A L +++ +A+ +K D ++A+D +++
Sbjct: 60 QTE--LDQELEQISVVSGSQVSYGQSISAE--LNQLLVQAEQQRKKLQDEYVAIDTILIA 115
Query: 117 L--LEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
L L+ +Q + G+ +V ++V++ RG G +V S ++ ++AL+ YG DLV++
Sbjct: 116 LFNLDQNQFKKFLNQQGLTQKQVLAKVDEFRG--GERVTSKEQESGYKALEKYGTDLVKR 173
Query: 175 AG--KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A DPVIGRDEEI V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRI +GDVPSN
Sbjct: 174 AHSENPDPVIGRDEEILEVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIAKGDVPSN 233
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D +++LDMG+L+AGAKYRG+FEERLKAVLKEV +++G++ILFIDEIH ++GAG+TEG
Sbjct: 234 LVDKTIVSLDMGSLIAGAKYRGDFEERLKAVLKEVSKSDGQIILFIDEIHTIVGAGKTEG 293
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
SMDA NL KPMLARG+L IGATTL+EYR+ +EKD A ERRFQ+V V EPS+ DT+SILR
Sbjct: 294 SMDAGNLLKPMLARGELHLIGATTLDEYRENIEKDKALERRFQRVLVKEPSIEDTISILR 353
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHGVRI D ALV AA+LS+RYIT R+LPDKAIDL+DEA A ++V+++S P E
Sbjct: 354 GLKERFEIHHGVRIHDNALVAAAKLSSRYITDRYLPDKAIDLIDEASAKIKVEMNSNPTE 413
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D ++R+ M+L++E AL+ E D S RL +++KEL + +++ L R+ +KE E
Sbjct: 414 LDQVKRQLMRLQVEERALKNESDAESVKRLKDLQKELSETKEEKVKLESRWSAQKE---E 470
Query: 473 IRRLKQKREELLFA---LQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE---NL 526
I+++ K+ EL A LQEAE YDL +AA L++G I +E + QLE NQS+ +
Sbjct: 471 IKKISDKKNELDKAKHDLQEAESSYDLDQAAILQHGTIPALEKELEQLE-NQSESDHGDW 529
Query: 527 MLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVL 575
++ E+V +IA+ +S+ TGIPV RL + E+E+L+ LA EAV +V+++VL
Sbjct: 530 LVEESVTDKEIAQTISQMTGIPVARLVEGEREKLLHLADKLHNRVIGQDEAVQSVSDAVL 589
Query: 576 RSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSR 635
RSRAGL P +P GSFLFLGPTGVGKTEL+KALAE LFD E+ +VRIDMSEYME+ SVSR
Sbjct: 590 RSRAGLQDPNRPIGSFLFLGPTGVGKTELSKALAEALFDSEDNMVRIDMSEYMEKESVSR 649
Query: 636 LIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGR 695
L+GA PGY+G+EEGGQLTEAVRR PYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQGR
Sbjct: 650 LVGAAPGYIGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPEVFNILLQVLDDGRLTDGQGR 709
Query: 696 TVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFD 755
TV+FRNT++IMTSNLG++ LL RDQV + +FRPE LNR+D+I++F
Sbjct: 710 TVNFRNTILIMTSNLGSDLLLKNQSENKIDDNIRDQVQDVLHGYFRPEFLNRIDDIIMFT 769
Query: 756 PLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKK 815
PLS + +R++ + +++IRL+++ ++L+++D A D ++ ++YDP +GARP+RR++ K
Sbjct: 770 PLSKQDVRQIVIKLIHNLSIRLSDQEISLSISDDAQDYIVEQAYDPAFGARPLRRYITKN 829
Query: 816 VVTELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
V T L++ ++ + NSTV ID D LV++
Sbjct: 830 VETPLAKEIISGRVRPNSTVNIDVL--NDQLVFQ 861
>gi|453381257|dbj|GAC84145.1| chaperone ClpB [Gordonia paraffinivorans NBRC 108238]
Length = 850
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/837 (54%), Positives = 590/837 (70%), Gaps = 39/837 (4%)
Query: 31 PLHLAVALLSDPSGIFAQAINNAGGENAAQSAERVFNQAM-KKLPSQTPAPDEIPASTTL 89
P H+ VALL GI + + G + S R QA+ ++P+ A S
Sbjct: 31 PAHILVALLDQSDGIASPLLKAVGVD---PSNVRAQAQALVDRMPTVAQASSTPQLSRES 87
Query: 90 IKVIRRAQAAQKAHGDTHLAVDQLILGLLE-DSQIGDLFKEAGVAVARVKSEVEKLRGKE 148
I I AQ GD +++ + +++GL DS + L AG ++ +RG
Sbjct: 88 IAAITAAQQLAVELGDEYVSTEHVMVGLATGDSDVAKLLHNAGATPQALREAFVAVRGT- 146
Query: 149 GRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLI 206
RKV S ++T+QAL+ Y DL + A GKLDPVIGRD EIRRVV++LSRRTKNNPVLI
Sbjct: 147 -RKVTSEDPESTYQALEKYSTDLTKAAREGKLDPVIGRDTEIRRVVQVLSRRTKNNPVLI 205
Query: 207 GEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKE 266
GEPGVGKTA+VEGLAQRIV GDVP +L D +I+LDMG++VAGAKYRGEFEERLKAVL E
Sbjct: 206 GEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVISLDMGSMVAGAKYRGEFEERLKAVLDE 265
Query: 267 VEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVE 325
++ +EG++I FIDE+H ++GAG T + +MDA N+ KPMLARG+LR +GATTLEEYRKY+E
Sbjct: 266 IKASEGQIITFIDELHTIVGAGATGDSAMDAGNMIKPMLARGELRLVGATTLEEYRKYIE 325
Query: 326 KDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGR 385
KDAA ERRFQQVYV EPSV D + ILRGLK++YE HHGVRI D ALV AA LS RYIT R
Sbjct: 326 KDAALERRFQQVYVGEPSVEDAIGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITSR 385
Query: 386 HLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEV 445
LPDKAIDLVDEA + +R+++DS+P EID +ER +LE+E ALEKE D+ASK RL ++
Sbjct: 386 FLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERVVRRLEVEELALEKETDEASKERLEKL 445
Query: 446 RKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYG 505
R EL D ++KL L R+++EK ID +R LK++ E L AER DL RAA+LRYG
Sbjct: 446 RAELADQKEKLSELSARWQQEKTAIDAVRDLKEQLENLRGEADRAERDGDLGRAAELRYG 505
Query: 506 AI----QEVEAAIGQLEGNQSDENLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEK---- 557
I +E+EAA + G + + +ML E VGPD +AEVVS WTGIP R+ + E
Sbjct: 506 RIPALEKELEAA-QERTGADAGQQVMLKEEVGPDDVAEVVSSWTGIPAGRMLEGETAKLL 564
Query: 558 -------ERLIGLAEAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAE 610
+R++G AV AV+++V R+RAG+ P +P GSF+FLGPTGVGKTELAKALAE
Sbjct: 565 RMEDELGKRVVGQKAAVEAVSDAVRRARAGVADPNRPLGSFMFLGPTGVGKTELAKALAE 624
Query: 611 QLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVE 670
LFDDE+ +VRIDMSEY E+HSV+RL+GAPPGYVG+E GGQLTEAVRRRPY+VVLFDE+E
Sbjct: 625 FLFDDEHAMVRIDMSEYGEKHSVARLVGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEIE 684
Query: 671 KAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARD 730
KAH VF+ LLQVLD+GRLTDGQGRTVDFRNT++I+TSNLGA R+
Sbjct: 685 KAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTSNLGAGG-------------DRE 731
Query: 731 QVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAA 790
QV+ VR F+PE +NRLD++V+FD LS E+L ++ +Q+ + RLA+R + L V+ A
Sbjct: 732 QVMAAVRSAFKPEFINRLDDVVIFDALSEEELVRIVDIQLGQLEKRLAQRRLDLEVSPKA 791
Query: 791 LDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLV 847
+ + +DP+YGARP+RR ++K + +L+++L++ E+ + V ++ SP G++LV
Sbjct: 792 KEWLAHRGFDPVYGARPLRRLVQKAIGDQLAKLLLKGEVRDGDVVPVNVSPDGESLV 848
>gi|378827167|ref|YP_005189899.1| Chaperone protein ClpB [Sinorhizobium fredii HH103]
gi|365180219|emb|CCE97074.1| Chaperone protein ClpB [Sinorhizobium fredii HH103]
Length = 868
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/855 (52%), Positives = 593/855 (69%), Gaps = 21/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ + + A A + GH QFTP H+ LL D G+ A I AGG+ A+
Sbjct: 1 MNIEKYSERVRGFLQSAQTHALAEGHQQFTPEHVLKVLLDDDQGMAASLIERAGGD--AR 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
A + KLP T + S L KV A+ A K GD+ + V++L+L L +
Sbjct: 59 EARAGTAAVLAKLPKVTGGSGSVYLSQPLAKVFTAAEEAAKKAGDSFVTVERLLLALAIE 118
Query: 121 SQ--IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
S + +AG+ ++ + ++R +GR +SA+ + F +LK Y RDL E+A G
Sbjct: 119 SSAATASILTKAGITPTKLNQVINEIR--KGRTADSANAEQGFDSLKKYARDLTEEARDG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL+ALDMGAL+AGAKYRGEFEERLKAVL EV EG++ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 RLMALDMGALIAGAKYRGEFEERLKAVLNEVRAEEGEIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVMVEEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+D L
Sbjct: 357 KYEQHHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL+KE D +SK RL ++ +L L ++ L R++ EK+++ L
Sbjct: 417 DRRVIQLKIEREALKKETDVSSKDRLEKLELDLAALEEQAAALTARWQAEKQKLGRAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG-NQSDENLMLTETVGPD 535
K++ +E LQ +R+ + RA +L YG I +E + + E + S N M+ E V PD
Sbjct: 477 KKQLDEARNELQIVQRKGEFQRAGELAYGVIPTLEKELAEAESQDSSSANAMVQEVVIPD 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA VVSRWTGIPV ++ + E+++L +G +AV AV+ +V R+RAGL P
Sbjct: 537 NIAHVVSRWTGIPVDKMLEGERDKLLRMEDELAKWVVGQGDAVQAVSRAVRRARAGLQDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALA LFDDE+ L+RIDMSEYME+HSV+RLIGAPPGYV
Sbjct: 597 NRPIGSFIFLGPTGVGKTELTKALARFLFDDESALMRIDMSEYMEKHSVARLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGG LTE+VRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+I
Sbjct: 657 GYEEGGALTESVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTMI 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLGAE+ L+G+ RDQV++ VR FRPE LNR+DEI++F L ++
Sbjct: 717 IMTSNLGAEY-LTGLGENEDSDAVRDQVMEVVRTAFRPEFLNRVDEIILFHRLRRSEMGA 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q++ + L ER + L + D A + + YDP YGARP++R ++K V L+ +
Sbjct: 776 IVDIQLERLRKLLGERKITLELEDEARAFLADKGYDPAYGARPLKRAIQKYVQDPLAEKM 835
Query: 825 VREEIDENSTVYIDA 839
++ E + S + I A
Sbjct: 836 LQGEFPDGSAIKIIA 850
>gi|306821686|ref|ZP_07455283.1| chaperone protein ClpB [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304550268|gb|EFM38262.1| chaperone protein ClpB [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 863
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/869 (49%), Positives = 610/869 (70%), Gaps = 27/869 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DKFT K+ AI A LA + + + +HL ALL GI + + +
Sbjct: 1 MNMDKFTQKSASAIMEAQNLALANNNQEVDSIHLFKALLVQEDGIIPKILQLMNVNTTSL 60
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
E + + KLP + + + AS ++ A+ + D +++V+ L L + E
Sbjct: 61 INET--DTVISKLPKVSGSSVTNVYASRKFSSLLANAEKERVDFKDEYVSVEHLFLAMFE 118
Query: 120 D--SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ S + ++FK+ + + ++ +RG +KV S + + T+ L+ YGR+LVE A
Sbjct: 119 EKGSALTEVFKKFDIKRSVFLEKLISVRG--NQKVTSENPEDTYNVLEKYGRNLVEMAKK 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGR++EIRR +RILSRRTKNNPVLIGEPGVGKTAVVEGLA RIV+ DVP +L D
Sbjct: 177 GKLDPVIGREDEIRRAIRILSRRTKNNPVLIGEPGVGKTAVVEGLAMRIVKNDVPDSLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+ ALDMG+L+AGAKYRGEFEERLKAVL EVE+++G +I+FIDEIH ++GAG+TEGSMD
Sbjct: 237 KTIFALDMGSLIAGAKYRGEFEERLKAVLTEVEKSDGNIIMFIDEIHTIVGAGKTEGSMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+L CIGATT++EYRKY+EKD A ERRFQ V V EP+V DT+SILRG+K
Sbjct: 297 AGNLLKPMLARGELHCIGATTIDEYRKYIEKDPALERRFQVVMVDEPTVEDTISILRGIK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EK+E HHGVRI D A++ A LS +YI+ R LPDKAIDL+DEA A +R Q+DS P E+D+
Sbjct: 357 EKFEIHHGVRISDSAIISCAVLSNKYISDRFLPDKAIDLMDEAAAMIRTQIDSLPTELDD 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
+ RK MQLEIE+ AL+KE D+ SK RL + +EL L+ + E++ I ++
Sbjct: 417 MSRKIMQLEIEVQALKKESDEQSKKRLATIEEELSALKQDYANQKASWDVERQSIQGVKA 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE--NLMLTETVG 533
L+++ E++ + A+R YDL + L+YG + E+E + + Q ++ N +L E V
Sbjct: 477 LQEEIEDVKHQMDIAQRNYDLETLSRLKYGKLVELENKLAEQIKVQDEKKNNALLKEEVT 536
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
++IA +VS+WTGIPV +L + E+++L IG EAV +VA+S+LR+R+GL
Sbjct: 537 EEEIATIVSQWTGIPVQKLVETERDKLLHLQDILHQDVIGQDEAVKSVADSILRARSGLK 596
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P++P GSF+FLGPTGVGKT+LAK+L++ LFD E+ ++RIDMSEY E+H+V+RLIGAPPG
Sbjct: 597 DPRKPIGSFIFLGPTGVGKTQLAKSLSKALFDSEDNIIRIDMSEYQEKHTVARLIGAPPG 656
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGGQLTEAVRR+PYS++LFDE+EKAH VFN LLQ+LDDGRLTD +GRTV+F++T
Sbjct: 657 YVGYEEGGQLTEAVRRKPYSIILFDEIEKAHSEVFNVLLQLLDDGRLTDSKGRTVNFKDT 716
Query: 703 VIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
++IMTSN+G++ LL + +VT Q A+ +V +R F+PE LNR+D+I++F+PL+ +
Sbjct: 717 IVIMTSNIGSQILLDSVKEHNEVTDQ-AKKEVEDMLRFSFKPEFLNRIDDIIMFNPLTKD 775
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q+ ++ L +KD+ RL +R + L +TD A ++ ESY P GARP++R++++ + T L
Sbjct: 776 QISQIVELCLKDIQARLQDRQITLNITDKAKTLIAEESYTPQLGARPVKRYIQRNIETLL 835
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLVYR 849
+ +++ +++NSTV ID + DN+V +
Sbjct: 836 GKEIIKGTLEDNSTVTIDV--EDDNIVIK 862
>gi|289766158|ref|ZP_06525536.1| ClpB protein [Fusobacterium sp. D11]
gi|289717713|gb|EFD81725.1| ClpB protein [Fusobacterium sp. D11]
Length = 858
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/860 (49%), Positives = 604/860 (70%), Gaps = 36/860 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
MNP++FT T AI +A +++ P LA+ LL +G+ + I G +
Sbjct: 2 MNPNQFTENTISAINLAVDISKGNMQQSIRPEALALGLLMQNNGLIPRVIEKMGLNLQYI 61
Query: 59 AQSAERVFNQAMK---KLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
E+ N K K+ ++ + D+ S ++ RA+ GD+ L+V+ +
Sbjct: 62 ISELEKEMNNYPKVEVKVSNENISLDQKTNS-----ILNRAEKIMNEMGDSFLSVEHIFK 116
Query: 116 GLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++E+ I FK G+ + + + +RG RKV++ + + T++ L+ Y +DLVE A
Sbjct: 117 AMIEEMPI---FKRLGINLEKYMEVLMNIRG--NRKVDNQNPEATYEVLEKYAKDLVELA 171
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GK+DP+IGRD EIRR ++I+SRRTKN+P+LIGEPGVGKTA+VEGLAQRI+ GDVP +L
Sbjct: 172 REGKIDPIIGRDSEIRRAIQIISRRTKNDPILIGEPGVGKTAIVEGLAQRILNGDVPESL 231
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ ++ +LDMGALVAGAKY+GEFEER+K VLKEVEE+ G +ILFIDEIH ++GAG+ EGS
Sbjct: 232 KNKKIFSLDMGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGS 291
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
+DA N+ KPMLARG+LR IGATT++EYRKY+EKD A ERRFQ + V EP++ DT+SILRG
Sbjct: 292 LDAGNMLKPMLARGELRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNIDDTISILRG 351
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LK+K+E +HGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +R ++DS PEE+
Sbjct: 352 LKDKFETYHGVRIADAAIVEAAVLSQRYITDRKLPDKAIDLIDEAAAMIRTEIDSMPEEL 411
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L RK +QLEIE+ AL+KE D ASK RL + KEL +L ++ + L +++ EKE I +I
Sbjct: 412 DQLTRKALQLEIEIKALQKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDISKI 471
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLT 529
+ +K++ E + +++AER YDL + ++L+YG + +E + Q + N+ D ++ +L
Sbjct: 472 KNIKREIENVKLEMEKAEREYDLTKLSELKYGKLATLEKEL-QEQQNKIDKDGKDDSLLK 530
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSR 578
+ V D+IA++VSRWTGIPV++L + +KE+++ G EAV AVA+++LRS
Sbjct: 531 QEVTADEIADIVSRWTGIPVSKLTETKKEKMLHLEDHIKERVKGQDEAVKAVADTMLRSV 590
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P GSF+FLGPTGVGKT LAK LA LFD E+ +VRIDMSEYM++ SV+RLIG
Sbjct: 591 AGLKDPNRPMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDSVVRIDMSEYMDKFSVTRLIG 650
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEA+R +PYSV+LFDE+EKAH VFN LLQVLDDGRLTDGQGR VD
Sbjct: 651 APPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVD 710
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F+NT+IIMTSN+G+ HL+ + + R++V E++ F+PE LNR+DEI+ F L
Sbjct: 711 FKNTLIIMTSNIGS-HLI--LEDPNLSESTREKVTDELKARFKPEFLNRVDEIITFKALD 767
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++++ +L +KD+ +L + + L +D +D + +YDP YGARP+RR+++K++ T
Sbjct: 768 LPAIKEIVKLSLKDLENKLKSKHITLEFSDKMIDYLANNAYDPHYGARPLRRYIQKEIET 827
Query: 819 ELSRMLVREEIDENSTVYID 838
L++ ++ EI E S V ID
Sbjct: 828 SLAKKILANEIHEKSDVLID 847
>gi|294784183|ref|ZP_06749484.1| ATP-dependent chaperone protein ClpB [Fusobacterium sp. 3_1_27]
gi|294488253|gb|EFG35598.1| ATP-dependent chaperone protein ClpB [Fusobacterium sp. 3_1_27]
Length = 858
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/860 (49%), Positives = 604/860 (70%), Gaps = 36/860 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
MNP++FT T AI +A +++ P LA+ LL +G+ + I G +
Sbjct: 2 MNPNQFTENTISAINLAVDISKGNMQQSIRPEALALGLLMQNNGLIPRVIEKMGLNLQYI 61
Query: 59 AQSAERVFNQAMK---KLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
E+ N K K+ ++ + D+ S ++ RA+ GD+ L+V+ +
Sbjct: 62 ISELEKEMNNYPKVEVKISNENLSLDQKTNS-----ILNRAEKIMNEMGDSFLSVEHIFK 116
Query: 116 GLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++E+ I FK+ G+ + + + +RG +KV++ + + T++ L+ Y +DLVE A
Sbjct: 117 AMIEEMPI---FKKLGINLEKYMEVLMNIRG--NKKVDNQNPEATYEVLEKYAKDLVELA 171
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GK+DP+IGRD EIRR ++I+SRRTKN+P+LIGEPGVGKTA+VEGLAQRI+ GDVP +L
Sbjct: 172 REGKIDPIIGRDSEIRRAIQIISRRTKNDPILIGEPGVGKTAIVEGLAQRILNGDVPESL 231
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ ++ +LDMGALVAGAKY+GEFEER+K VLKEVEE+ G +ILFIDEIH ++GAG+ EGS
Sbjct: 232 KNKKIFSLDMGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGS 291
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
+DA N+ KPMLARG+LR IGATT++EYRKY+EKD A ERRFQ + V EP++ DT+SILRG
Sbjct: 292 LDAGNMLKPMLARGELRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNIDDTISILRG 351
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LK+K+E +HGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +R ++DS PEE+
Sbjct: 352 LKDKFETYHGVRIADAAIVEAATLSQRYITDRKLPDKAIDLIDEAAAMIRTEIDSMPEEL 411
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L RK +QLEIE+ AL+KE D ASK RL + KEL +L ++ + L +++ EKE I +I
Sbjct: 412 DQLTRKALQLEIEIKALQKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDISKI 471
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLT 529
+ +K++ E + + +AER YDL + ++L+YG + +E + Q + N+ D ++ +L
Sbjct: 472 KNIKREIENVKLEMDKAEREYDLTKLSELKYGKLATLEKEL-QEQQNKIDKDGKDDSLLK 530
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSR 578
+ V D+IA++VSRWTGIPV++L + +KE+++ G EAV AVA+++LRS
Sbjct: 531 QEVTADEIADIVSRWTGIPVSKLTETKKEKMLHLEEHIKERVKGQDEAVKAVADTMLRSV 590
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P GSF+FLGPTGVGKT LAK LA LFD E+ +VRIDMSEYM++ SV+RLIG
Sbjct: 591 AGLKDPNRPMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDNVVRIDMSEYMDKFSVTRLIG 650
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEA+R +PYSV+LFDE+EKAH VFN LLQVLDDGRLTDGQGR VD
Sbjct: 651 APPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVD 710
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F+NT+IIMTSN+G+ HL+ + + R++V E++ F+PE LNR+DEI+ F L
Sbjct: 711 FKNTLIIMTSNIGS-HLI--LENPALSESTREKVADELKARFKPEFLNRIDEIITFKALD 767
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++++ +L +KD+ +L + + L +D +D + +YDP YGARP+RR+++K++ T
Sbjct: 768 LSAIKEIVKLSLKDLENKLKPKHITLEFSDKMVDYLANNAYDPHYGARPLRRYIQKEIET 827
Query: 819 ELSRMLVREEIDENSTVYID 838
L++ ++ E+ E S V ID
Sbjct: 828 SLAKKILANEVHEKSNVLID 847
>gi|82778016|ref|YP_404365.1| protein disaggregation chaperone [Shigella dysenteriae Sd197]
gi|309789454|ref|ZP_07684040.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 1617]
gi|81242164|gb|ABB62874.1| heat shock protein [Shigella dysenteriae Sd197]
gi|308922697|gb|EFP68218.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 1617]
Length = 857
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/846 (52%), Positives = 590/846 (69%), Gaps = 25/846 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ NQA+ +LP ++ S L++V+ + GD ++ + +L LE
Sbjct: 60 LRTDI-NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ D+ K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLADILKAAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTIDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+VVAA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVVAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +EL D + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEA---AIGQLEGNQSDENLMLTETVGP 534
+ E+ A+++A R DLAR ++L+YG I E+E A QLEG +L V
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR---LLRNKVTD 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
+IAEV++RWTGIPV+R+ ++E+E+L IG EAV+AV+ ++ RSRAGL
Sbjct: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL KALA +FD + +VRIDMSE+ME+HSVSRL+GAPPGY
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV
Sbjct: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ G++ ++ VL V +FRPE +NR+DE+VVF PL + +
Sbjct: 714 VIMTSNLGSD-LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+A++Q+K + RL ERG + ++D AL ++ YDP+YGARP++R +++++ L++
Sbjct: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832
Query: 824 LVREEI 829
++ E+
Sbjct: 833 ILSGEL 838
>gi|38492937|pdb|1QVR|A Chain A, Crystal Structure Analysis Of Clpb
gi|38492938|pdb|1QVR|B Chain B, Crystal Structure Analysis Of Clpb
gi|38492939|pdb|1QVR|C Chain C, Crystal Structure Analysis Of Clpb
gi|5231279|dbj|BAA81745.1| ClpB [Thermus thermophilus HB8]
gi|8051691|dbj|BAA96085.1| ClpB [Thermus thermophilus HB8]
Length = 854
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/864 (51%), Positives = 607/864 (70%), Gaps = 30/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +++T EA+A A LA H HL LL D + + + AG + A
Sbjct: 1 MNLERWTQAAREALAQAQVLAQRMKHQAIDLPHLWAVLLKDERSLAWRLLEKAGADPKA- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ + + + +LP A ++ L + RA+ + D ++AVD L+L L E
Sbjct: 60 -LKELQERELARLPKVEGAEVGQYLTSRLSGALNRAEGLMEELKDRYVAVDTLVLALAEA 118
Query: 121 SQIGDLFKEAGV-AVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ G+ + +K +++LRG GR V++ ++T+ AL+ YG DL A GK
Sbjct: 119 T--------PGLPGLEALKGALKELRG--GRTVQTEHAESTYNALEQYGIDLTRLAAEGK 168
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRV++IL RRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L R
Sbjct: 169 LDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKR 228
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+++L MG+L+AGAKYRGEFEERLKAV++EV +++G+VILFIDE+H V+GAG+ EG++DA
Sbjct: 229 IVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAG 288
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+LR IGATTL+EYR+ +EKD A ERRFQ VYV EP+V +T+SILRGLKEK
Sbjct: 289 NMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTVEETISILRGLKEK 347
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D A++ AA LS RYIT R LPDKAIDL+DEA A +R+ L+S PEEID LE
Sbjct: 348 YEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALE 407
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK++QLEIE AL+KEKD S+ RL + E+ L +++ L +++E+E + ++R +
Sbjct: 408 RKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQ 467
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ +E+ ++ AER+YDL RAA+LRYG + ++EA + L + E D I
Sbjct: 468 HRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEED-I 526
Query: 538 AEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
AE+VSRWTGIPV++L + E+ +R++G EA+ AVA+++ R+RAGL P +
Sbjct: 527 AEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNR 586
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTELAK LA LFD E ++RIDM+EYME+H+VSRLIGAPPGYVG+
Sbjct: 587 PIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGY 646
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTD GRTVDFRNTVII+
Sbjct: 647 EEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIIL 706
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG+ +L G+ + RD+V + +++HFRPE LNRLDEIVVF PL+ EQ+R++
Sbjct: 707 TSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIV 766
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q+ + RLAE+ ++L +T+AA D + YDP++GARP+RR +++++ T L++ ++
Sbjct: 767 EIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILA 826
Query: 827 EEIDENSTVYIDASPKGDNLVYRV 850
E+ E V +D P G LV+ V
Sbjct: 827 GEVKEGDRVQVDVGPAG--LVFAV 848
>gi|407278916|ref|ZP_11107386.1| ATP-dependent chaperone ClpB [Rhodococcus sp. P14]
Length = 853
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/837 (53%), Positives = 588/837 (70%), Gaps = 31/837 (3%)
Query: 25 GHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAERVFNQAMKKLPSQT---PAPD 81
GH + HL +AL+ G+ + + AG A ++ QA+ + P + P
Sbjct: 2 GHTEVDGEHLLLALVDQQEGLVPRLLEQAGANVDALRSD--LEQALMRRPKVSGPGATPG 59
Query: 82 EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED---SQIGDLFKEAGVAVARVK 138
++ + L K++ A+ K D++++V+ L++ L E+ S G + GV
Sbjct: 60 QVMITQRLAKLLDAAEREAKRLKDSYVSVEHLVMALSEEGSTSAAGRVLTSHGVTRETFL 119
Query: 139 SEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AGKLDPVIGRDEEIRRVVRILS 196
+ + +RG + +V SA+ + ++AL+ YGRDLV + AGKLDPVIGRD EIRRV +ILS
Sbjct: 120 AALTTVRGNQ--RVTSATPEGAYEALEKYGRDLVSEGRAGKLDPVIGRDAEIRRVTQILS 177
Query: 197 RRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEF 256
R+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP L D + +LDMG+LVAGAKYRGEF
Sbjct: 178 RKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGLRDKTIFSLDMGSLVAGAKYRGEF 237
Query: 257 EERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT--EGSMDAANLFKPMLARGQLRCIGA 314
EERL+AVL EV+ AEG+++LF+DE+H V+GAG EGS+DA N+ KPMLARG+L IGA
Sbjct: 238 EERLQAVLSEVKAAEGRILLFVDELHTVVGAGSVGGEGSLDAGNMLKPMLARGELHMIGA 297
Query: 315 TTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGHHGVRIQDRALVVA 374
TTL+EYRK++E DAA ERRFQ V V EPS D +SILRGL+E+ E HGV+IQD ALV A
Sbjct: 298 TTLDEYRKHIESDAALERRFQTVLVDEPSAEDAISILRGLRERLEVFHGVKIQDGALVAA 357
Query: 375 AQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIELHALEKEK 434
LS RYIT R LPDKAIDLVDEACA +R ++DS P E+D L RK +LEIE AL KE
Sbjct: 358 VTLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAELDELTRKVTRLEIEEAALSKET 417
Query: 435 DKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKREELLFALQEAERRY 494
D ASK RL E+RKEL DLR + +++ E++ I ++ L+ + E L +EAER Y
Sbjct: 418 DAASKTRLEELRKELADLRAETDARHAQWEAERQAIRRVQELRGELERLRHEAEEAERNY 477
Query: 495 DLARAADLRYGAIQEVE----AAIGQLEGNQSDENLMLTETVGPDQIAEVVSRWTGIPVT 550
DL RAA+LRYG I E+E AA QL Q N +L E V D+IAE+V+ WTGIPV
Sbjct: 478 DLNRAAELRYGEITELERKLKAAEEQLATRQG-RNPLLREVVTEDEIAEIVAAWTGIPVA 536
Query: 551 RLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGV 599
RL + E+E R+IG EAV VA++V+R+R+G+ P++P GSF+FLGPTGV
Sbjct: 537 RLQEGEREKLLKLDEILHERVIGQDEAVQLVADAVIRARSGIRDPRRPIGSFIFLGPTGV 596
Query: 600 GKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRR 659
GKTELAK LA LFD E+ +VR+DMSEY E+H+VSRLIGAPPGYVG++EGGQLTEAVRR+
Sbjct: 597 GKTELAKTLASALFDSEDNMVRLDMSEYQERHTVSRLIGAPPGYVGYDEGGQLTEAVRRK 656
Query: 660 PYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGM 719
PYSVVLFDE+EKAH VFNTLLQVLDDGR+TD QGR VDFRNTVIIMTSN+G++HLL G+
Sbjct: 657 PYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFRNTVIIMTSNIGSQHLLDGV 716
Query: 720 MGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRLA 778
++ AR +VL E+R HFRPE LNR+D+IV+F PL+ Q+ + LQ+ D+ RL+
Sbjct: 717 TADGEIKPDARARVLAELRGHFRPEFLNRIDDIVLFTPLTLPQIEHIVELQLTDLRNRLS 776
Query: 779 ERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDENSTV 835
ER + L +T A ++ +DP+YGARP+RR++ +V T + R L+R EI+ T+
Sbjct: 777 ERQIHLNITPEARRLIAEHGFDPVYGARPLRRYIAHEVETRIGRALLRGEIEPGGTI 833
>gi|317493980|ref|ZP_07952397.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918307|gb|EFV39649.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 857
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/863 (50%), Positives = 600/863 (69%), Gaps = 21/863 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T K A+A A LA + P+HL ALL+ G + +AG A
Sbjct: 1 MRLDRLTSKFQLALADAQSLALGRDNQFIEPVHLMSALLNQEGGTVRPLLTSAGVNTANL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E QA+ +LP A ++ S LI+V+ + DT ++ + +L LED
Sbjct: 61 RQE--LEQAISRLPQVEGAGGDVQPSNELIRVLNLCDKLAQKRNDTFISSELFVLAALED 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+GD+ K AG +V + +E++RG G KV+ A+ + QALK Y DL E+A GK
Sbjct: 119 RGNLGDILKAAGATTQKVSTAIEQMRG--GEKVDDANAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRIV G+VP L + R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+++LDMG+L+AGAK+RGEFEERLKAVL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLSLDMGSLIAGAKFRGEFEERLKAVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEP+V DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PE +D LE
Sbjct: 357 YELHHHVQITDPAIVAAANLSHRYIADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLE 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D ASK RL + +EL+ + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALNKESDDASKKRLEMLNEELEHKEREYSELEEEWKAEKASLSGTQNIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ +L++A R DLA+ ++++YG + ++E + ++ +L V +I
Sbjct: 477 AEIEQAKISLEQARRVGDLAKMSEIQYGKLPDLEKQLEAATQSEGKTMKLLRNKVTDVEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV+R+ ++E+ ER+IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVSRMLESERAKLLRMEDDLHERVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA LFD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ V+ V HFRPE +NR+DE VVF PL + ++ +A
Sbjct: 717 TSNLGSD-LIQDRFGQLDYGEMKELVMSVVSHHFRPEFINRIDETVVFHPLDQKNIKAIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
R+Q++ + RL E+G ++ +TDAAL+ + +DP+YGARP++R +++++ L++ ++
Sbjct: 776 RIQLERLYQRLEEKGYSVTITDAALEQLSKAGFDPVYGARPLKRAIQQEIENPLAQQILS 835
Query: 827 EEIDENSTVYIDASPKGDNLVYR 849
++ + +D GD ++ +
Sbjct: 836 GKLIPGKAITLDVD--GDQIIAK 856
>gi|375002451|ref|ZP_09726791.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353077139|gb|EHB42899.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
Length = 861
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/854 (51%), Positives = 592/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 5 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSAG-INAGQ 63
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S+ L++V+ + GD ++ + +L LE
Sbjct: 64 -LRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALES 122
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 123 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 180
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 181 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 240
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 241 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 300
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 301 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 360
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 361 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 420
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 421 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 540
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 541 AEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 600
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 601 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 660
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 661 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 720
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ VL V ++FRPE +NR+DE+VVF PL + + +A
Sbjct: 721 TSNLGSD-LIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIA 779
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 780 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 839
Query: 827 EEIDENSTVYIDAS 840
E+ + ++A+
Sbjct: 840 GELVPGKVIRLEAN 853
>gi|424908660|ref|ZP_18332037.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. viciae
USDA 2370]
gi|392844691|gb|EJA97213.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. viciae
USDA 2370]
Length = 874
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/867 (50%), Positives = 594/867 (68%), Gaps = 23/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ + + A A + H QF+P H+ LL D G+ A I AGG+ A+
Sbjct: 1 MNIEKYSERVRGFLQSAQTFALAENHQQFSPEHVLKVLLDDEQGMVASLIERAGGD--AK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A + A+ KLP + + + L KV A+ K GD+ + V++L+ L +
Sbjct: 59 EARLANDAALAKLPKVSGGNGGLSLTAPLAKVFSTAEDLAKKAGDSFVTVERLLQALAIE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ K+AGV + + +R +GR +SA+ + F ALK + RDL E+A G
Sbjct: 119 SSASTSASLKKAGVTAQALNQVINDIR--KGRTADSANAEQGFDALKKFARDLTEEAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ G +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 KLMALDMGALIAGAKYRGEFEERLKAVLNEVQSENGGIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVLVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+D L
Sbjct: 357 KYEQHHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL++E D++S RL ++ EL D +K L R++ EK+++ L
Sbjct: 417 DRRIIQLKIEREALKQETDQSSVDRLKKLEDELADTEEKADALTARWQAEKQKLGHAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG-NQSDENLMLTETVGPD 535
K++ +E L A+R RA +L YG I +E + E + S M+ E V D
Sbjct: 477 KKRLDEARNELAIAQRNGQFQRAGELTYGIIPGIEKELAAAEARDSSGAGSMVQEVVTAD 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA VVSRWTGIPV ++ + ++E+L +G EAV AV+++V RSRAGL P
Sbjct: 537 NIAHVVSRWTGIPVDKMLEGQREKLLRMEDELAKSVVGQGEAVQAVSKAVRRSRAGLQDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL K+LA LFDDE+ +VR+DMSEYME+HSV+RLIGAPPGYV
Sbjct: 597 NRPIGSFIFLGPTGVGKTELTKSLARFLFDDESAMVRLDMSEYMEKHSVARLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+I
Sbjct: 657 GYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTII 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E ++ M + R+ V++ VR HFRPE LNR+D+I++F L +++
Sbjct: 717 IMTSNLGSE-FMTQMGDNDDVDSVRELVMERVRSHFRPEFLNRIDDIILFHRLRRDEMGA 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+K + L +R ++L + + A + + + YDP YGARP++R ++K V L+ M+
Sbjct: 776 IVEIQLKRLVSLLGDRKISLELDEDARNWLANKGYDPAYGARPLKRVIQKAVQDRLAEMI 835
Query: 825 VREEIDENSTVYIDASPKGDNLVYRVQ 851
+ EI + S V + + D L+++V+
Sbjct: 836 LGGEIPDGSRVKVTSGT--DRLLFKVK 860
>gi|453076082|ref|ZP_21978862.1| clp peptidase ATP-binding subunit clpb [Rhodococcus triatomae BKS
15-14]
gi|452761630|gb|EME19930.1| clp peptidase ATP-binding subunit clpb [Rhodococcus triatomae BKS
15-14]
Length = 850
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/864 (53%), Positives = 594/864 (68%), Gaps = 37/864 (4%)
Query: 4 DKF--THKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
D F T KT A+ A + A++AG+ P HL ALL GI + + G + A
Sbjct: 2 DSFSPTTKTQAALTAALQSASAAGNPDIRPAHLLAALLDQTDGIASPLLKAVGVDPAV-- 59
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE-D 120
R + +LP T A + I I AQ D +++ + ++ GL D
Sbjct: 60 VHREAQTLVDRLPRATGATTQPQLGREAIAAITAAQHLATEMDDEYVSTEHVLFGLASGD 119
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ L G ++ +RG +V S + ++QAL+ Y DL +A GKL
Sbjct: 120 GDVAKLLNGHGATPQALRDAFTTVRGSA--RVTSPDPEGSYQALEKYSTDLTARAREGKL 177
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L +
Sbjct: 178 DPVIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKTV 237
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAA 297
I+LD+G++VAGAKYRGEFEERLKAVL +++ + G+VI FIDE+H ++GAG T E +MDA
Sbjct: 238 ISLDLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDAG 297
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KPMLARG+LR +GATTLEEYRKY+EKDAA ERRFQQV V EPSV DTV ILRGLKE+
Sbjct: 298 NMIKPMLARGELRLVGATTLEEYRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKER 357
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+P EID +E
Sbjct: 358 YEVHHGVRITDSALVAAAALSDRYITSRFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVE 417
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK QLEIE AL KE D AS+ RL ++R+EL D R+KL L R++ EK+ ID +R +K
Sbjct: 418 RKVRQLEIEEMALTKETDAASQERLAKLREELADDREKLSQLNARWQNEKQAIDSVRGIK 477
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVE---AAIGQLEGNQSDENLMLTETVGP 534
++ EEL + AER DL +AA+LRYG I E+E AA + G SD ++ML E VGP
Sbjct: 478 EQLEELRGESERAERDGDLGKAAELRYGRIPELEKKLAAAVEASGGASDGDVMLKEEVGP 537
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D +A+VV+ WTGIP R+ + E +R++G A+AV AV+++V R+RAG+
Sbjct: 538 DDVADVVAAWTGIPAGRMMEGETAKLLRMETELGKRVVGQADAVQAVSDAVRRARAGVAD 597
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEY E+H+V+RL+GAPPGY
Sbjct: 598 PNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYSEKHAVARLVGAPPGY 657
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+E GGQLTEAVRRRPYSVVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDFRNT+
Sbjct: 658 VGYESGGQLTEAVRRRPYSVVLFDEVEKAHPDVFDILLQVLDDGRLTDGQGRTVDFRNTI 717
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+I+TSNLGA ++QV+ VR F+PE +NRLD++VVFDPLS EQL
Sbjct: 718 LILTSNLGAGG-------------DKEQVMAAVRSAFKPEFVNRLDDVVVFDPLSEEQLE 764
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +Q+ +A RL R + L V+ AA + YDP+YGARP+RR +++ + +L++
Sbjct: 765 SIVDIQLAQLATRLQARRLTLDVSPAARMWLAVRGYDPLYGARPLRRLIQQAIGDQLAKK 824
Query: 824 LVREEIDENSTVYIDASPKGDNLV 847
L+ E+ + TV + + GD+LV
Sbjct: 825 LLAGEVHDGDTVPVGVTEDGDHLV 848
>gi|331269758|ref|YP_004396250.1| ATPase AAA-2 domain-containing protein [Clostridium botulinum
BKT015925]
gi|329126308|gb|AEB76253.1| ATPase AAA-2 domain protein [Clostridium botulinum BKT015925]
Length = 869
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/857 (49%), Positives = 601/857 (70%), Gaps = 21/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE-NAA 59
MN DK T + +++ A+ A H Q +HL AL++ G+ G N+
Sbjct: 4 MNVDKMTIRVQQSLNDAYSEAVKYDHQQVDVVHLFSALVNQEDGLIPNIFEKMGVNINSL 63
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
++ + +M K+ + I A+ + +V+ +A K D++++V+ +++ +++
Sbjct: 64 KNDLHLELDSMPKVLGEGAKSSGIVATRRINEVLVKADEIAKDFKDSYISVEHVMIAIMD 123
Query: 120 DSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ +G + + + + + +RG + +V++ + T+ AL YG +L+E A
Sbjct: 124 IDKKGLVGKILNKYDITKDKFFKILSDVRGNQ--RVDNQDPEGTYDALAKYGTNLIELAK 181
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRR +RILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP L
Sbjct: 182 KHKLDPVIGRDEEIRRTIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLK 241
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMG+L+AGAKYRGEFEERLKAVLKEV+ +EGK+ILFIDEIH ++GAG+T+G+M
Sbjct: 242 EKIIFSLDMGSLIAGAKYRGEFEERLKAVLKEVQSSEGKIILFIDEIHTIVGAGKTDGAM 301
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KP+LARG+L CIGATT +EYR+Y+EKD A ERRFQ V V EP+V DT+SILRGL
Sbjct: 302 DAGNLIKPLLARGELHCIGATTFDEYRQYIEKDKALERRFQTVIVNEPTVEDTISILRGL 361
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGVRI D A+V AA+LS RYI R++PDKAIDL+DEA A +R ++DS P E+D
Sbjct: 362 KERFEIHHGVRIHDSAIVAAAKLSHRYIQDRYMPDKAIDLIDEAGAMIRSEIDSLPTELD 421
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK++ LE E AL KE D+ASK RL + KEL +L++K + +Y+KEK I E+R
Sbjct: 422 MIRRKQLMLETEKEALTKENDEASKKRLEILEKELAELKEKNNEMTAKYEKEKAHILEVR 481
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTETV 532
LK + +E L++AER YDL + A+L+YG I E+E + + E + ++ E +L E V
Sbjct: 482 DLKTELDEARGDLEKAERDYDLNKVAELKYGTIPELERKVQEKEKDMEKNYEGALLKEEV 541
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGL 581
+I+E+VS+WTGIPVTRL + E K+R+IG EA AV+ +V+R+RAGL
Sbjct: 542 TESEISEIVSKWTGIPVTRLVEGERQKLLRLEDELKKRVIGQDEATVAVSNAVIRARAGL 601
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
++P GSF+FLGPTGVGKTELAK LA LFD+E+ ++RIDMSEYME+H+VSRLIG PP
Sbjct: 602 KDERRPIGSFIFLGPTGVGKTELAKTLARNLFDNEDNIIRIDMSEYMEKHAVSRLIGPPP 661
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR PYSV+LFDE+EKA+ VFN LQ+LDDGRLTD +G+TVDF+N
Sbjct: 662 GYVGYEEGGQLTEAVRRNPYSVILFDEIEKANDDVFNIFLQILDDGRLTDNKGKTVDFKN 721
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+IIMTSNLG+ +LL + R++V+ ++ F+PE LNR+D+I++F PL+
Sbjct: 722 TIIIMTSNLGSSYLLENKKEDSIDEKIREEVMNTLKLRFKPEFLNRIDDIILFKPLTSAG 781
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
++K+ + ++ V RL ER +++ VTD+A DI+ E YDPIYGARP++R++ + TE++
Sbjct: 782 IKKIIDIFLEGVKDRLKERNISMQVTDSAKDILAKEGYDPIYGARPLKRYISNILETEIA 841
Query: 822 RMLVREEIDENSTVYID 838
+ ++ EI V +D
Sbjct: 842 KKIISGEIYTGCNVVVD 858
>gi|254439548|ref|ZP_05053042.1| ATPase, AAA family [Octadecabacter antarcticus 307]
gi|198254994|gb|EDY79308.1| ATPase, AAA family [Octadecabacter antarcticus 307]
Length = 869
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/857 (51%), Positives = 596/857 (69%), Gaps = 23/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT ++ I A +A H + P HL ALL D G+ A IN +GG +AA+
Sbjct: 1 MNLEKFTERSRGFIQAAQTIAMRESHQRLAPEHLLKALLDDDQGLAANLINASGG-DAAR 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL-LE 119
+ V + A+ K+P+ T + T K++ A+ K GD+ + V+++++ L +
Sbjct: 60 VLQNV-DIALAKMPTVTGDAAQTFMDGTTGKMLAEAEKLAKKAGDSFVPVERILMALTMV 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
S+ D V + S + +R +GR ++AS + + ALK Y DL +A GK
Sbjct: 119 KSKAKDALDAGNVTAQTLNSAINDIR--KGRTADTASAEEGYDALKKYAMDLTARAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
+DP+IGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L +
Sbjct: 177 IDPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLRNKS 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
L++LDMGAL+AGAKYRGEFEERLKAVL EV EA G++I+FIDE+H ++GAG+ +G+MDAA
Sbjct: 237 LLSLDMGALIAGAKYRGEFEERLKAVLNEVTEAVGEIIIFIDEMHTLVGAGKGDGAMDAA 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
NL KP LARG+L C+GATTL+EYRKYVEKDAA RRFQ + V EP+V DT+SILRG+KEK
Sbjct: 297 NLIKPALARGELHCVGATTLDEYRKYVEKDAALARRFQPIVVQEPTVEDTISILRGIKEK 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+++DS+PEE+D L+
Sbjct: 357 YELHHGVRISDSALVAAATLSHRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEELDQLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ MQL+IE AL E D+ASK RL ++ EL ++++ + +++ E+++++ R LK
Sbjct: 417 RQVMQLQIEAAALRMEDDQASKDRLKKLEGELSKVQEQSVSMTAKWQAERDKLEGARCLK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ ++ L A+R+ +LA+A +L YG I ++E +G E D NLM+ E V P+QI
Sbjct: 477 EDLDQARAELDIAKRQGNLAKAGELSYGVIPQLEKQLGDGE----DSNLMVEEAVRPEQI 532
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
A VV RWTGIPV R+ + E+E+L IG AV +VA +V R+RAGL +
Sbjct: 533 ASVVERWTGIPVARMLEGEREKLLRMEDGLHKRVIGQDTAVRSVANAVRRARAGLNDEGR 592
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KA+AE LFDD+N +VR+DMSE+ME+HSVSRLIGAPPGYVG+
Sbjct: 593 PLGSFLFLGPTGVGKTELTKAVAEFLFDDDNAMVRLDMSEFMEKHSVSRLIGAPPGYVGY 652
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
+EGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDG LTDGQGRTVDF+ T+II+
Sbjct: 653 DEGGVLTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIIL 712
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ LS + M A+ V+ VR HFRPE LNRLDE V+FD L+ + +
Sbjct: 713 TSNLGSQA-LSQLPEGSDMADAKRNVMDAVRAHFRPEFLNRLDETVIFDRLARTDMDGIV 771
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+QM + RLA R + LA+ D A + E YDP++GARP++R +++ + L+ ML+
Sbjct: 772 TIQMSRLLKRLASRKINLALDDGARKWLADEGYDPVFGARPLKRVIQRALQDPLAEMLLS 831
Query: 827 EEIDENSTVYIDASPKG 843
++ + TV + A G
Sbjct: 832 GDVKDGDTVPVSAGVDG 848
>gi|251788635|ref|YP_003003356.1| protein disaggregation chaperone [Dickeya zeae Ech1591]
gi|247537256|gb|ACT05877.1| ATP-dependent chaperone ClpB [Dickeya zeae Ech1591]
Length = 857
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/855 (51%), Positives = 591/855 (69%), Gaps = 25/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA H PLHL ALL+ G + AG +
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGRDHQFIEPLHLMSALLNQEGGTVGPLLTAAGANISRL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E QA+ +LP ++ S+ L++ + + GDT ++ + +L + E
Sbjct: 61 KNE--IEQAISRLPQVEGTGGDVQPSSELVRTLNICDKLAQKKGDTFISSELFVLAVFES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
S +GDL K AG V +E++RG G++V S + QALK + DL E+A GK
Sbjct: 119 HSALGDLLKNAGATQQNVAKAIEQVRG--GQQVNDQSAEDQRQALKKFTIDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRIV G+VP L + R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+++LDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLSLDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+++EKDAA ERRFQ+V+VAEP+V DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQFIEKDAALERRFQKVFVAEPTVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI+ R LPDKAIDL+DEA +++R+Q+DS+PE +D L+
Sbjct: 357 YELHHHVQITDPAIVAAAMLSHRYISDRKLPDKAIDLIDEAASSIRMQIDSKPEPLDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL+KE D+AS RL + EL+ + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALKKESDEASLKRLEILNAELEQKEREYSKLEEEWKAEKASLTGTQNIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVE---AAIGQLEGNQSDENLMLTETVGP 534
E+ +L++A R+ DL R ++L+YG I E+E AA Q EG +L V
Sbjct: 477 AALEQAKISLEQARRQGDLGRMSELQYGKIPELEKQLAAATQAEGKTMH---LLRNRVTD 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
+IAEV++RWTGIPV+R+ ++E+E+L IG EAV AVA S+ RSRAGL
Sbjct: 534 AEIAEVLARWTGIPVSRMLESEREKLLRMEQELHQRVIGQNEAVEAVANSIRRSRAGLSD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL K LA LFD ++ +VRIDMSE+ME+HSVSRL+GAPPGY
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKTLASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV
Sbjct: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ G++ RD VL V HFRPE +NR+DE+VVF PL +
Sbjct: 714 VIMTSNLGSD-LIQERFGEMNYSQMRDMVLGIVSHHFRPEFINRIDEVVVFHPLGQSHIT 772
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+A++Q++ + R+ ERG ++++DAAL+++ +DP+YGARP++R +++ + L++
Sbjct: 773 SIAQIQLQRLYKRMEERGYTVSISDAALELLGKSGFDPVYGARPLKRAIQQMIENPLAQK 832
Query: 824 LVREEIDENSTVYID 838
++ + +V +D
Sbjct: 833 ILSGALVPGKSVTLD 847
>gi|23335984|ref|ZP_00121214.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Bifidobacterium longum DJO10A]
gi|239620927|ref|ZP_04663958.1| ClpB [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|322690037|ref|YP_004209771.1| Clp protease [Bifidobacterium longum subsp. infantis 157F]
gi|239516188|gb|EEQ56055.1| ClpB [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|320461373|dbj|BAJ71993.1| Clp protease [Bifidobacterium longum subsp. infantis 157F]
Length = 894
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/863 (52%), Positives = 603/863 (69%), Gaps = 35/863 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT EA+ A + A++AG+AQ LH+ ALL +G+ I AGG+ A A
Sbjct: 9 KFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDPQAIGA-- 66
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
A+ LPS + + P AS L I +A+ + GD +++ + L++G+ + +
Sbjct: 67 AVRNALVALPSASGSSTSQPQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPN 126
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q ++ ++ GV A ++ V +RG G KV S + +++AL+ Y DL A GKLD
Sbjct: 127 QSAEILEKNGVTAASLRKAVPGVRG--GAKVTSPDAEGSYKALEKYSTDLTAAAKEGKLD 184
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L +LI
Sbjct: 185 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQGKKLI 244
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL E++ A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 245 SLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNM 304
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 305 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 364
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L+RK
Sbjct: 365 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRK 424
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ E+ +++ L+ K
Sbjct: 425 VTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAK 484
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAI-----------GQLEGNQSDENLML 528
++L + R +LA A+ + YG I ++ + N +DE M+
Sbjct: 485 LDDLRVQADKYTREGNLAEASKILYGEIPSIQKELAAAESADAESADASAANPADEP-MV 543
Query: 529 TETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRS 577
+ V D +AE+VS WTGIPV RL G+NEK +R+IG EA+ AV+++V RS
Sbjct: 544 PDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRS 603
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAG+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLI
Sbjct: 604 RAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLI 663
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GA PGYVG+E+GGQLTEAVRRRPYSVVLFDEVEKA+ +F+ LLQVLDDGRLTDGQGRTV
Sbjct: 664 GAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 723
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+NT++IMTSNLG++ L++ M + V+ V +F+PE LNRLD+IV+F PL
Sbjct: 724 DFKNTILIMTSNLGSQFLVNEDM---DADAKKKAVMDAVHMNFKPEFLNRLDDIVMFHPL 780
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ E+L + +Q+ V+ RL +R + L VTD+A + + YDP YGARP+RR ++ +V
Sbjct: 781 TREELGGIVDIQVAGVSQRLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVG 840
Query: 818 TELSRMLVREEIDENSTVYIDAS 840
+L+RML+ ++ + TV +D +
Sbjct: 841 DQLARMLLAGKVHDGDTVLVDQT 863
>gi|118616025|ref|YP_904357.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium
ulcerans Agy99]
gi|118568135|gb|ABL02886.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium
ulcerans Agy99]
Length = 848
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/864 (51%), Positives = 604/864 (69%), Gaps = 36/864 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT A+ A + A++AG+ + P HL +ALL+ GI A + G + A
Sbjct: 4 FNP---TTKTQAALTSALQAASAAGNPEIRPAHLLMALLTQADGIAAPLLEAVGVDPATI 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE- 119
E + + +LP + A + S + I AQ D +++ + +++GL
Sbjct: 61 RTE--AQRLVDRLPQASGASTQPQLSRESLAAITTAQQLATEMDDEYVSTEHVLVGLATG 118
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
DS++ L G + ++ K+RG +V S + T+QAL+ Y DL +A GK
Sbjct: 119 DSEVAKLLTGHGASPQALREAFVKVRGSA--RVTSPEPEATYQALEKYSTDLTARAREGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L D
Sbjct: 177 LDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKT 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDA 296
++ALD+G++VAG+KYRGEFEERLKAVL +++ + G++I FIDE+H ++GAG T EG+MDA
Sbjct: 237 IVALDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KPMLARG+LR +GATTL+EYRK++EKDAA ERRFQQVYV EPS DT+ ILRGLK+
Sbjct: 297 GNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSAEDTIGILRGLKD 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+P EID +
Sbjct: 357 RYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEV 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ER +LEIE AL KE+D ASK RL ++R EL D +++L L R++ EK I+ +R L
Sbjct: 417 ERLVRRLEIEEMALSKEEDDASKDRLEKLRAELADKKEELAELTTRWQNEKNSIEIVREL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAI-GQLEGNQSDENLMLTETVGPD 535
K++ + L + AER DLA+AA+LRYG I E+E + + Q+ E +ML E VGPD
Sbjct: 477 KEQLDALRGESERAERDGDLAKAAELRYGRIPEMEKKLDAAVPHAQAREQVMLKEEVGPD 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRP 584
IAEVVS WTGIP R+ + E R+IG +AV AV+++V RSRAG+ P
Sbjct: 537 DIAEVVSAWTGIPAGRMLEGETAKLLRMEDELGHRVIGQKKAVQAVSDAVRRSRAGVADP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+PTGSF+FLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RL+GAPPGY+
Sbjct: 597 NRPTGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYI 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++ GGQLTEAVRRRPY+V+LFDE+EKAH VF+ LLQVLD+GRLTDGQGRTVDFRNT++
Sbjct: 657 GYDHGGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTIL 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSNLG+ DQV+ VR F+PE +NRLD++++FD L+ ++L +
Sbjct: 717 ILTSNLGSGG-------------TPDQVMAAVRAAFKPEFINRLDDVLIFDALNPDELVQ 763
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q++ + RLA+R + L V+ A + + +DP+YGARP+RR +++ + +L++ML
Sbjct: 764 IVDIQLQQLDKRLAQRRLQLEVSLPAKEWLAQRGFDPVYGARPLRRLVQQAIGDQLAKML 823
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ ++ + TV ++ S G++LV+
Sbjct: 824 LAGQVHDGDTVPVNVSADGESLVF 847
>gi|378985221|ref|YP_005248377.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|312913650|dbj|BAJ37624.1| protein disaggregation chaperone [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
Length = 857
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/854 (51%), Positives = 593/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S+ L++V+ + GD ++ + +L LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALD+GALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDIGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV+R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ VL V ++FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ + ++A+
Sbjct: 836 GELVPGKVIRLEAN 849
>gi|347526626|ref|YP_004833373.1| chaperone protein ClpB [Sphingobium sp. SYK-6]
gi|345135307|dbj|BAK64916.1| chaperone protein ClpB [Sphingobium sp. SYK-6]
Length = 859
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/864 (52%), Positives = 606/864 (70%), Gaps = 26/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + + A +A H Q P HL ALL D G+ + I AGG+ AQ
Sbjct: 1 MNLEKFTDRAKGFLQSAQTVAIRMNHQQIAPDHLLKALLEDEQGMASGLIRAAGGD--AQ 58
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPA-STTLIKVIRRA-QAAQKAHGDTHLAVDQLILGL 117
A + A+ K+P+ + + P + ++V+ +A Q AQKA GD+++ V++L+L L
Sbjct: 59 RALSETDLALSKIPAVSGGGAQQAPGLNNDSVRVLDQAEQVAQKA-GDSYVTVERLLLAL 117
Query: 118 LE--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++ G + AGV + + + +LR +G+ ++AS + + ALK + RDL E A
Sbjct: 118 ALSLNTSAGKALQAAGVKADALNAAINELR--KGKTADTASAEDRYDALKKFARDLTEAA 175
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRDEEIRR ++IL+RRTKNNPVLIGEPGVGKTA+ EGLA RI GDVP L
Sbjct: 176 REGKLDPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIAEGLALRIANGDVPDTL 235
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
L+ALDMG+L+AGAKYRGEFEERLK VL EV+ EG +ILF+DE+H ++GAG++EG+
Sbjct: 236 KGRTLMALDMGSLIAGAKYRGEFEERLKGVLDEVKAGEGDIILFVDEMHTLIGAGKSEGA 295
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA+NL KP LARG+L CIGATTL+EYRKYVEKD A +RRFQ V+V EP+V DT+SILRG
Sbjct: 296 MDASNLLKPALARGELHCIGATTLDEYRKYVEKDPALQRRFQPVFVGEPTVEDTISILRG 355
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
+K+KYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA + +R++++S+PEEI
Sbjct: 356 IKDKYETHHGVRIADAAIVSAATLSNRYITDRFLPDKAIDLMDEAASRIRMEVESKPEEI 415
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
+NL+R+ MQL+IE AL+KE D+ SK RL + ++L +L + L R++ EK++I
Sbjct: 416 ENLDRRIMQLQIEREALKKESDQPSKDRLAALEEDLANLEQQSAELTQRWQAEKDKIAGE 475
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVG 533
+LK++ + AL++A+R + A+A +L+YG I +E + E + + ML E V
Sbjct: 476 AKLKEQLDAARIALEQAQRNGEYAKAGELQYGTIPGLEKQLA--EAQSASQGAMLREEVT 533
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
+ IA VVSRWTGIPV R+ + E+E R+IG A+AV AV+ +V RSRAGL
Sbjct: 534 SEDIASVVSRWTGIPVDRMMEGEREKLLAMEAELGKRVIGQADAVKAVSTAVRRSRAGLQ 593
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTEL KALA LFDD+N +VRIDMSE+ME+HSV+RLIGAPPG
Sbjct: 594 DPNRPLGSFLFLGPTGVGKTELTKALAGFLFDDDNAMVRIDMSEFMEKHSVARLIGAPPG 653
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQGRTVDF NT
Sbjct: 654 YVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHADVFNVLLQVLDDGRLTDGQGRTVDFTNT 713
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+I++TSNLG++ + S + ++ DQV+ VR HFRPE LNRLDEIV+F L E +
Sbjct: 714 IIVLTSNLGSQFIAS-LADDEPVEKVEDQVMDVVRAHFRPEFLNRLDEIVLFHRLGAEHM 772
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ V L +R V L +TDAA + YDP+YGARP++R +++ + L+
Sbjct: 773 GPIVDIQVGRVGRLLKDRKVTLDLTDAARAWLGRVGYDPVYGARPLKRAVQRYLQDPLAD 832
Query: 823 MLVREEIDENSTVYIDASPKGDNL 846
+++R E+ + +TV++D G +L
Sbjct: 833 LILRGEVPDGATVHVDEGDGGLSL 856
>gi|260495578|ref|ZP_05815703.1| ATP-dependent chaperone ClpB [Fusobacterium sp. 3_1_33]
gi|260196920|gb|EEW94442.1| ATP-dependent chaperone ClpB [Fusobacterium sp. 3_1_33]
Length = 857
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/860 (49%), Positives = 604/860 (70%), Gaps = 36/860 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
MNP++FT T AI +A +++ P LA+ LL +G+ + I G +
Sbjct: 1 MNPNQFTENTISAINLAVDISKGNMQQSIRPEALALGLLMQNNGLIPRVIEKMGLNLQYI 60
Query: 59 AQSAERVFNQAMK---KLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
E+ N K K+ ++ + D+ S ++ RA+ GD+ L+V+ +
Sbjct: 61 ISELEKEMNNYPKVEVKVSNENISLDQKTNS-----ILNRAEKIMNEMGDSFLSVEHIFK 115
Query: 116 GLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++E+ I FK G+ + + + +RG RKV++ + + T++ L+ Y +DLVE A
Sbjct: 116 AMIEEMPI---FKRLGINLEKYMEVLMNIRG--NRKVDNQNPEATYEVLEKYAKDLVELA 170
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GK+DP+IGRD EIRR ++I+SRRTKN+P+LIGEPGVGKTA+VEGLAQRI+ GDVP +L
Sbjct: 171 REGKIDPIIGRDSEIRRAIQIISRRTKNDPILIGEPGVGKTAIVEGLAQRILNGDVPESL 230
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ ++ +LDMGALVAGAKY+GEFEER+K VLKEVEE+ G +ILFIDEIH ++GAG+ EGS
Sbjct: 231 KNKKIFSLDMGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGS 290
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
+DA N+ KPMLARG+LR IGATT++EYRKY+EKD A ERRFQ + V EP++ DT+SILRG
Sbjct: 291 LDAGNMLKPMLARGELRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNIDDTISILRG 350
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LK+K+E +HGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +R ++DS PEE+
Sbjct: 351 LKDKFETYHGVRIADAAIVEAAVLSQRYITDRKLPDKAIDLIDEAAAMIRTEIDSMPEEL 410
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L RK +QLEIE+ AL+KE D ASK RL + KEL +L ++ + L +++ EKE I +I
Sbjct: 411 DQLTRKALQLEIEIKALQKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDISKI 470
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLT 529
+ +K++ E + +++AER YDL + ++L+YG + +E + Q + N+ D ++ +L
Sbjct: 471 KNIKREIENVKLEMEKAEREYDLTKLSELKYGKLATLEKEL-QEQQNKIDKDGKDDSLLK 529
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSR 578
+ V D+IA++VSRWTGIPV++L + +KE+++ G EAV AVA+++LRS
Sbjct: 530 QEVTADEIADIVSRWTGIPVSKLTETKKEKMLHLEDHIKERVKGQDEAVKAVADTMLRSV 589
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P GSF+FLGPTGVGKT LAK LA LFD E+ +VRIDMSEYM++ SV+RLIG
Sbjct: 590 AGLKDPNRPMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDSVVRIDMSEYMDKFSVTRLIG 649
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEA+R +PYSV+LFDE+EKAH VFN LLQVLDDGRLTDGQGR VD
Sbjct: 650 APPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVD 709
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F+NT+IIMTSN+G+ HL+ + + R++V E++ F+PE LNR+DEI+ F L
Sbjct: 710 FKNTLIIMTSNIGS-HLI--LEDPNLSESTREKVTDELKARFKPEFLNRVDEIITFKALD 766
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++++ +L +KD+ +L + + L +D +D + +YDP YGARP+RR+++K++ T
Sbjct: 767 LPAIKEIVKLSLKDLENKLKSKHITLEFSDKMIDYLANNAYDPHYGARPLRRYIQKEIET 826
Query: 819 ELSRMLVREEIDENSTVYID 838
L++ ++ EI E S V ID
Sbjct: 827 SLAKKILANEIHEKSDVLID 846
>gi|260577287|ref|ZP_05845260.1| ATP-dependent chaperone ClpB [Rhodobacter sp. SW2]
gi|259020468|gb|EEW23791.1| ATP-dependent chaperone ClpB [Rhodobacter sp. SW2]
Length = 870
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/859 (51%), Positives = 605/859 (70%), Gaps = 26/859 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT ++ + A +A H + P HL AL+ D G+ + I +GGE A+
Sbjct: 1 MNLEKFTERSRGFLQAAQTIALRESHQRLAPEHLLKALMDDDQGLASNLIRRSGGE-PAR 59
Query: 61 SAERVFNQAMKKLPSQT--PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL- 117
E V + A+ KLP T P PA +++V+ A+ K GD+ + V+++++ L
Sbjct: 60 VVEAV-DLAISKLPKVTGDAQPFMDPA---MVRVLDEAETVAKKAGDSFVPVERILMALC 115
Query: 118 LEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ ++ + V ++ + + +R +GR ++AS + + ALK Y RDL E A
Sbjct: 116 MVKTKAKEALDAGAVTAQKLNAAINDIR--KGRTADTASAEEGYDALKKYARDLTEAARE 173
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GK+DP+IGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L +
Sbjct: 174 GKIDPIIGRDDEIRRTMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVDGDVPESLKN 233
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV +A G++ILFIDE+H ++GAG++EG+MD
Sbjct: 234 KKLMALDMGALIAGAKYRGEFEERLKAVLNEVTQASGEIILFIDEMHTLVGAGKSEGAMD 293
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
AANL KP LARG+L C+GATTL+EYRKYVEKDAA RRFQ V V EP+V DT+SILRG+K
Sbjct: 294 AANLIKPALARGELHCVGATTLDEYRKYVEKDAALARRFQPVMVNEPTVEDTISILRGIK 353
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE HHGVRI D ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS+PEE+D
Sbjct: 354 EKYELHHGVRISDSALVAAATLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDA 413
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
L+R+ +QL+IE AL+KE+D ASK RL +++KEL DL ++ + +++ E+++++ R
Sbjct: 414 LDRQILQLQIEAEALKKEEDAASKDRLEKLQKELSDLLERSSEMTAKWQSERDKLEVARD 473
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK++ ++ L +A+R +L RA +L YG + +E + + E + L+++E VGP+
Sbjct: 474 LKEQLDKARAELDQAKRDGNLGRAGELSYGILPGLEKKLAEAEAREG--VLLVSEAVGPE 531
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
QIAEVV RWTGIP +R+ + E+E+L IG A+ AVA +V R+RAGL
Sbjct: 532 QIAEVVERWTGIPTSRMLEGEREKLLRMEDELGKRVIGQRRALTAVANAVRRARAGLNDE 591
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
++P GSFLFLGPTGVGKTEL KA+AE LFDD+ +VRIDMSE+ME+H+VSRLIGAPPGYV
Sbjct: 592 KRPLGSFLFLGPTGVGKTELTKAVAEYLFDDDAAMVRIDMSEFMEKHAVSRLIGAPPGYV 651
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY V+LFDEVEKAH VFN LLQVLDDG LTDG GRTVDF+ T+I
Sbjct: 652 GYDEGGVLTEAVRRRPYQVLLFDEVEKAHPDVFNILLQVLDDGVLTDGHGRTVDFKQTLI 711
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSNLGA + LS + AR +V++ VR+HFRPE LNRLD+ ++FD L + +
Sbjct: 712 ILTSNLGA-YALSQLPDGADPTAARAEVMEAVRQHFRPEFLNRLDDQIIFDRLGRDDMGA 770
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+K + RL R + L + AA D + E YDP++GARP++R ++ + L+ M+
Sbjct: 771 IVEIQLKLLEKRLVGRKITLELDKAAKDWLADEGYDPVFGARPLKRVFQRHLQDPLASMI 830
Query: 825 VREEIDENSTVYIDASPKG 843
+ ++ + S V I A G
Sbjct: 831 LAGDVMDGSNVVISAGADG 849
>gi|90420190|ref|ZP_01228098.1| chaperone clpB [Aurantimonas manganoxydans SI85-9A1]
gi|90335524|gb|EAS49274.1| chaperone clpB [Aurantimonas manganoxydans SI85-9A1]
Length = 874
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/867 (51%), Positives = 594/867 (68%), Gaps = 24/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S H QFTP HL L+ D G+ A I AGG Q
Sbjct: 1 MNIEKYTERVRGFIQAAQTQAVSRDHQQFTPEHLLKVLIDDEEGMAAGLIEKAGGR--PQ 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-- 118
A+ +P + ++ + L K+ A+ K GD++++V++L+L +
Sbjct: 59 EVRIAVEAALDAMPKVSGGGSQMYLAQPLAKIFATAEEIAKKAGDSYVSVERLLLAMTIE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ ++ + AGV + + +E LR +GR +SAS ++ + ALK Y RDL A G
Sbjct: 119 KATKTATILANAGVTPNGLNAAIETLR--KGRTADSASAESGYDALKKYARDLTAAAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLRDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMG+L+AGAKYRGEFEERLKAVL EV A G +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 QLMALDMGSLIAGAKYRGEFEERLKAVLSEVTAAAGNIILFIDEMHTLVGAGKGDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V+V+EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVFVSEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AAQLS RYIT R LPDKAIDLVDE A +R+Q+DS+PE +D +
Sbjct: 357 KYEQHHQVRISDSALVAAAQLSNRYITDRFLPDKAIDLVDEGAARLRMQVDSKPEALDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL +E D ASK RL + EL +L ++ + ++ EK ++ L
Sbjct: 417 DRRIMQLKIEREALRRESDDASKDRLERLEGELANLEEESDRITTTWQAEKSKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQ--SDENLMLTETVGP 534
K++ +E+ L A+R+ + RA +L YG I ++EA + + E M+ ETV
Sbjct: 477 KKRLDEVRNELAVAQRKGEFQRAGELAYGEIPQLEAQLKEAEAQDGAGTAGSMVEETVTA 536
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
D IA VVSRW+GIPV R+ + E++ R++G EAV AV+++V R+RAGL
Sbjct: 537 DHIAHVVSRWSGIPVDRMLEGERDKLLRMEDALQTRVVGQGEAVQAVSKAVRRARAGLQD 596
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSF+FLGPTGVGKTEL K+LA LFDDE +VR+DMSE+ME+HSVSRLIGAPPGY
Sbjct: 597 PNRPIGSFIFLGPTGVGKTELTKSLAAFLFDDETAMVRLDMSEFMEKHSVSRLIGAPPGY 656
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+
Sbjct: 657 VGYEEGGSLTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTI 716
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSNLGAE L+ + + ARDQV++ V++ FRPE LNR+DE ++F L ++
Sbjct: 717 IIMTSNLGAE-FLTALRDDEDAEAARDQVMEVVKRAFRPEFLNRVDETILFHRLHRSEMG 775
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +QMK + LA+R + + + + + + YDP YGARP++R ++++V L+
Sbjct: 776 AIVDIQMKRLDQLLADRKIRVELDETGREWLAERGYDPAYGARPLKRVIQREVQDPLAEK 835
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRV 850
++ E+ + S + I + GD+L++ V
Sbjct: 836 ILLGEVRDESVIKI--AGGGDHLIFHV 860
>gi|34762131|ref|ZP_00143139.1| ClpB protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27888208|gb|EAA25266.1| ClpB protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 858
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/860 (49%), Positives = 604/860 (70%), Gaps = 36/860 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
MNP++FT T AI +A +++ P LA+ LL +G+ + I G +
Sbjct: 2 MNPNQFTENTISAINLAVDISKGNMQQSIRPEALALGLLMQNNGLIPRVIEKMGLNLQYI 61
Query: 59 AQSAERVFNQAMK---KLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
E+ N K K+ ++ + D+ S ++ RA+ GD+ L+V+ +
Sbjct: 62 ISELEKEMNNYPKVEVKVSNENISLDQKTNS-----ILNRAEKIMNEMGDSFLSVEHIFK 116
Query: 116 GLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++E+ I FK+ G+ + + + +RG RKV++ + + T++ L+ Y +DLVE A
Sbjct: 117 AMIEEMPI---FKKLGINLEKYMEVLMNIRG--NRKVDNQNPEATYEVLEKYAKDLVELA 171
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GK+DP+IGRD EIRR ++I+SRRTKN+P+LIGEPGVGKTA+VEGLAQRI+ GDVP +L
Sbjct: 172 REGKIDPIIGRDSEIRRAIQIISRRTKNDPILIGEPGVGKTAIVEGLAQRILNGDVPESL 231
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ ++ +LDMGALVAGAKY+GEFEER+K VLKEVEE+ G +ILFIDEIH ++GAG+ EGS
Sbjct: 232 KNKKIFSLDMGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGS 291
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
+DA N+ KPMLARG+LR IGATT++EYRKY+EKD A ERRFQ + V EP++ DT+SILRG
Sbjct: 292 LDAGNMLKPMLARGELRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNIDDTISILRG 351
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LK+K+E +HGVRI D A+V AA LS RYIT R LPDKAIDL+DEA A +R ++DS PEE+
Sbjct: 352 LKDKFETYHGVRIADAAIVEAATLSQRYITDRKLPDKAIDLIDEAAAMIRTEIDSMPEEL 411
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L RK +QLEIE+ AL+KE D ASK RL + KEL +L ++ + L +++ EKE I +I
Sbjct: 412 DQLTRKALQLEIEIKALQKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDISKI 471
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLT 529
+ +K++ E + + +AER YDL + ++L+YG + +E + Q + N+ D ++ +L
Sbjct: 472 KNIKREIENVKLEMDKAEREYDLTKLSELKYGKLATLEKEL-QEQQNKIDRDGKDDSLLK 530
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSR 578
+ V D+IA++VSRWTGIPV++L + +KE+++ G EAV AVA+++LRS
Sbjct: 531 QEVTADEIADIVSRWTGIPVSKLTETKKEKMLHLEDHIKERVKGQDEAVKAVADTMLRSV 590
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P GSF+FLGPTGVGKT LAK LA LFD E+ +VRIDMSEYM++ SV+RLIG
Sbjct: 591 AGLKDPNRPMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDNVVRIDMSEYMDKFSVTRLIG 650
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEA+R +PYSV+LFDE+EKAH VFN LLQVLDDGRLTDGQGR VD
Sbjct: 651 APPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVD 710
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F+NT+IIMTSN+G+ HL+ + + R++V E++ F+PE LNR+DEI+ F L
Sbjct: 711 FKNTLIIMTSNIGS-HLI--LEDPALSESTREKVTDELKARFKPEFLNRIDEIITFKALD 767
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++++ +L +KD+ +L + + L +D +D + +YDP YGARP+RR+++K++ T
Sbjct: 768 LPAIKEIVKLSLKDLENKLKPKHITLEFSDKMVDYLANNAYDPHYGARPLRRYIQKEIET 827
Query: 819 ELSRMLVREEIDENSTVYID 838
L++ ++ EI E S V ID
Sbjct: 828 SLAKKILANEIHEKSDVLID 847
>gi|384200654|ref|YP_005586401.1| Clp protease [Bifidobacterium longum subsp. longum KACC 91563]
gi|338753661|gb|AEI96650.1| Clp protease [Bifidobacterium longum subsp. longum KACC 91563]
Length = 889
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/861 (52%), Positives = 603/861 (70%), Gaps = 35/861 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT EA+ A + A++AG+AQ LH+ ALL +G+ I AGG+ A +A
Sbjct: 4 KFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDPQAIAA-- 61
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
A+ LPS + + P AS L I +A+ + GD +++ + L++G+ + +
Sbjct: 62 AVRNALVALPSASGSSTSQPQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q ++ ++ GV A ++ V +RG G KV S + +++AL+ Y DL A GKLD
Sbjct: 122 QSAEILEKNGVTAASLRKAVPGVRG--GAKVTSPDAEGSYKALEKYSTDLTAAAKEGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L +LI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQGKKLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL E++ A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 240 SLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 300 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L+RK
Sbjct: 360 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ E+ +++ L+ K
Sbjct: 420 VTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAK 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAI-----------GQLEGNQSDENLML 528
++L + R +LA A+ + YG I ++ + N ++E M+
Sbjct: 480 LDDLRVQADKFTREGNLAEASKILYGEIPSIQKELAAAESADAESADASAANPANEP-MV 538
Query: 529 TETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRS 577
+ V D +AE+VS WTGIPV RL G+NEK +R+IG EA+ AV+++V RS
Sbjct: 539 PDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRS 598
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAG+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLI
Sbjct: 599 RAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLI 658
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GA PGYVG+E+GGQLTEAVRRRPYSVVLFDEVEKA+ +F+ LLQVLDDGRLTDGQGRTV
Sbjct: 659 GAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+NT++IMTSNLG++ L++ M + V+ V +F+PE LNRLD+IV+F PL
Sbjct: 719 DFKNTILIMTSNLGSQFLVNEDM---DADAKKKAVMDAVHMNFKPEFLNRLDDIVMFHPL 775
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ E+L + +Q+ VA RL +R + L VTD+A + + YDP YGARP+RR ++ +V
Sbjct: 776 TREELGGIVDIQVAGVAQRLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVG 835
Query: 818 TELSRMLVREEIDENSTVYID 838
+L+RML+ ++ + TV +D
Sbjct: 836 DQLARMLLAGKVHDGDTVLVD 856
>gi|365834579|ref|ZP_09376024.1| ATP-dependent chaperone protein ClpB [Hafnia alvei ATCC 51873]
gi|364568968|gb|EHM46597.1| ATP-dependent chaperone protein ClpB [Hafnia alvei ATCC 51873]
Length = 857
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/863 (50%), Positives = 600/863 (69%), Gaps = 21/863 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T K A+A A LA + P+HL ALL+ G + +AG A+
Sbjct: 1 MRLDRLTSKFQLALADAQSLALGRDNQFIEPVHLMSALLNQEGGTVRPLLTSAGVNTASL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E QA+ +LP A ++ S LI+V+ + DT ++ + +L LED
Sbjct: 61 RQE--LEQAISRLPQVEGAGGDVQPSNELIRVLNLCDKLAQKRNDTFISSELFVLAALED 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+GD+ K AG +V + +E++RG G KV+ A+ + QALK Y DL E+A GK
Sbjct: 119 RGNLGDILKAAGATTQKVSTAIEQMRG--GEKVDDANAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRIV G+VP L + R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+++LDMG+L+AGAK+RGEFEERLKAVL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLSLDMGSLIAGAKFRGEFEERLKAVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEP+V DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PE +D LE
Sbjct: 357 YELHHHVQITDPAIVAAANLSHRYIADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLE 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D ASK RL + +EL+ + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALNKESDDASKKRLEMLNEELEHKEREYSELEEEWKAEKASLSGTQNIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ +L++A R DLA+ ++++YG + +E + ++ +L V +I
Sbjct: 477 AEIEQAKISLEQARRVGDLAKMSEIQYGKLPGLEKQLEAATQSEGKTMKLLRNKVTDVEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV+R+ ++E+ ER+IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVSRMLESERAKLLRMEDDLHERVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA LFD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ V+ V HFRPE +NR+DE VVF PL + ++ +A
Sbjct: 717 TSNLGSD-LIQDRFGQLDYGEMKELVMSVVSHHFRPEFINRIDETVVFHPLDQKNIKAIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
R+Q++ + RL E+G ++ +TDAAL+ + +DP+YGARP++R +++++ L++ ++
Sbjct: 776 RIQLERLYQRLEEKGYSVTITDAALEQLSKAGFDPVYGARPLKRAIQQEIENPLAQQILS 835
Query: 827 EEIDENSTVYIDASPKGDNLVYR 849
++ + +D GD ++ +
Sbjct: 836 GKLIPGKAITLDVD--GDQIIAK 856
>gi|284993144|ref|YP_003411699.1| ATP-dependent chaperone ClpB [Geodermatophilus obscurus DSM 43160]
gi|284066390|gb|ADB77328.1| ATP-dependent chaperone ClpB [Geodermatophilus obscurus DSM 43160]
Length = 861
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/851 (53%), Positives = 600/851 (70%), Gaps = 23/851 (2%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
K T ++ EA+ A LA G A PLHL ALL GI + G + A A+
Sbjct: 4 KLTTRSQEAVTAAQRLAVDRGQAALEPLHLLAALLEQTDGIAGPLLKAVGADVADVRAK- 62
Query: 65 VFNQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL-EDSQ 122
+ A++++PS + A PA S L++V+ A A GD ++ + L++GL D +
Sbjct: 63 -TDAALRRMPSVSGATVPAPAPSRELLRVLNAAGEQASALGDEFVSTEHLLVGLAGSDGE 121
Query: 123 IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDP 180
G + AG + + +RG RKV +A ++TFQAL+ Y DL E+A GK+DP
Sbjct: 122 AGAVLTSAGATRDALLAAFRTVRGN--RKVTTADPESTFQALEKYAVDLTERAREGKIDP 179
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
V+GRD EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP +L RL+A
Sbjct: 180 VVGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLKGKRLMA 239
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANL 299
LD+ ++VAGAKYRGEFEERLKAVL+E+ E+EG+V+ FIDE+H ++GAG T + +MDA N+
Sbjct: 240 LDLASMVAGAKYRGEFEERLKAVLQEIAESEGEVVTFIDELHTIVGAGATGDSAMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR +GATTL+EYR+++EKD A ERRFQQV+V EPSV DT+ ILRGLKE+YE
Sbjct: 300 IKPMLARGELRMVGATTLDEYREHIEKDPALERRFQQVFVGEPSVEDTIGILRGLKERYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HHGVRI D A+V AA LS RY+T R LPDKAIDLVDEA + +R+++DS+P E+D +ER
Sbjct: 360 VHHGVRITDAAIVAAATLSDRYVTARFLPDKAIDLVDEAASRLRMEIDSRPVEVDEVERA 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LEIE AL KE D +S RLV +R +L D R +L L R++++K I I+++K++
Sbjct: 420 VRRLEIEEMALSKEDDPSSVERLVALRADLADKRQQLDELTARWQQDKSAIVRIQQIKEE 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAE 539
E + AER +LA+ A+LRYG + ++E A+ E + + ML E VGPD IAE
Sbjct: 480 LERARLEAERAERDGELAKVAELRYGRLPQLEKALADAEASVETGDSMLKEEVGPDDIAE 539
Query: 540 VVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQQPT 588
VV WTGIP RL + E + R++G +AV AV+++V R+R+G+ P +PT
Sbjct: 540 VVQAWTGIPAGRLLEGETQKLLRMEDELGRRVVGQPDAVRAVSDAVRRARSGVADPNRPT 599
Query: 589 GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE 648
GSFLFLGPTGVGKTELAKALAE LFDDE +VRIDMSEY E+HSV+RL+GAPPGYVG+E
Sbjct: 600 GSFLFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGYES 659
Query: 649 GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS 708
GGQLTEAVRRRPY+VVLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDFRNT++I+TS
Sbjct: 660 GGQLTEAVRRRPYTVVLFDEVEKAHQDVFDVLLQVLDDGRLTDGQGRTVDFRNTILILTS 719
Query: 709 NLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARL 768
NLG+ HL++ + + R V++ VR+HF+PE LNRLD++VVF L E+L + +
Sbjct: 720 NLGS-HLIADQ--SIPEERRRQAVMEVVRQHFKPEFLNRLDDVVVFHALGSEELAGIVDI 776
Query: 769 QMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREE 828
Q+ +A RLA R + L VTDAA + + +DP+YGARP+RR ++ + +L+R L+ E
Sbjct: 777 QVGVLARRLAARRLTLRVTDAAREWLALNGFDPVYGARPLRRLVQSAIGDQLARALLSGE 836
Query: 829 IDENSTVYIDA 839
+ + V +DA
Sbjct: 837 VRDGDEVVVDA 847
>gi|393724192|ref|ZP_10344119.1| ATPase [Sphingomonas sp. PAMC 26605]
Length = 859
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/864 (52%), Positives = 602/864 (69%), Gaps = 42/864 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT + + A +A H + P H+ ALL D G+ A I+ AGG+
Sbjct: 1 MNIEKFTDRAKGFLQSAQTVAIRMSHQRIAPDHILKALLEDEQGMAAGLISAAGGDPKRA 60
Query: 61 SAERVFNQAMKKLPS-------QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQL 113
+E + A+ K+P+ TP D ++V+ +A+ GD+ + V++L
Sbjct: 61 VSET--DLALSKIPAVSGSGAQATPGLD-----NDTVRVLDQAEQIATKSGDSFVTVERL 113
Query: 114 I--LGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL 171
+ L L ++ G K AGV + + +E++R GR +SA + F ALK + RDL
Sbjct: 114 LVALALSLNTAAGKALKTAGVTPEALNAAIEQVR--NGRVADSAGAEDKFDALKKFARDL 171
Query: 172 VEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDV 229
+ A GKLDPVIGRDEEIRR ++IL+RRTKNNPVLIGEPGVGKTA+ EGLA RI GDV
Sbjct: 172 TQAARDGKLDPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIAEGLALRIANGDV 231
Query: 230 PSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGR 289
P L D +L++LDMG+L+AGAKYRGEFEERLK VL EV+ AEG ++LFIDE+H ++GAG+
Sbjct: 232 PDTLKDRKLMSLDMGSLIAGAKYRGEFEERLKGVLDEVKAAEGDIVLFIDEMHQLIGAGK 291
Query: 290 TEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVS 349
+EG+MDA NL KP LARG+L C+GATTL+EYRKYVEKDAA +RRFQ V+V EP+VPDT+S
Sbjct: 292 SEGAMDAGNLLKPALARGELHCVGATTLDEYRKYVEKDAALQRRFQPVFVGEPTVPDTIS 351
Query: 350 ILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQ 409
ILRGLKEKYE HHGVRI D A+V AA LS RYIT R LPDKAIDL+DEA + +R++++S+
Sbjct: 352 ILRGLKEKYELHHGVRITDAAIVAAATLSNRYITDRFLPDKAIDLMDEAASRIRMEVESK 411
Query: 410 PEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKER 469
PEEI+ L+R+ +QL+IE AL++E D+AS+ RLV++ EL +L + L R++ EK++
Sbjct: 412 PEEIEILDRRIIQLKIEREALKRESDEASRDRLVKLDGELANLEQQSSELTTRWQGEKDK 471
Query: 470 IDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDEN 525
I +LK++ + L++A+R DLA+A +L YG I ++++AA G +G
Sbjct: 472 ISAEAKLKEQIDAARLELEQAQRAGDLAKAGELSYGRIPDLQRQLDAAAGATKGA----- 526
Query: 526 LMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESV 574
ML E V + IA VV+RWTGIPV R+ + E++ R+IG A+ AV+ +V
Sbjct: 527 -MLREEVTAEDIAGVVARWTGIPVERMLEGERDKLLQMEATIGKRVIGQQNAIRAVSTAV 585
Query: 575 LRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVS 634
R+RAGL P +P GSFLFLGPTGVGKTEL KALAE LFDD +VRIDMSE+ME+H+V+
Sbjct: 586 RRARAGLQDPNRPLGSFLFLGPTGVGKTELTKALAEFLFDDPTAMVRIDMSEFMEKHAVA 645
Query: 635 RLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQG 694
RLIGAPPGYVG+EEGG LTEAVRRRPY VVLFDEVEKAH VFN LLQVLDDGRLTDGQG
Sbjct: 646 RLIGAPPGYVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHGDVFNILLQVLDDGRLTDGQG 705
Query: 695 RTVDFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVF 754
RTVDF NT+I++TSNLG++ L + G+ V QV++ VR HFRPE LNRLDEIV+F
Sbjct: 706 RTVDFTNTIIVLTSNLGSQVLTTLGEGEDVASV-EPQVMEIVRGHFRPEFLNRLDEIVLF 764
Query: 755 DPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEK 814
L ++ + +Q+K +A LAER VAL +TDAA + YDP+YGARP++R +++
Sbjct: 765 HRLGQAEMAPIVDIQVKRIATLLAERKVALELTDAARVWLGRVGYDPVYGARPLKRAVQR 824
Query: 815 KVVTELSRMLVREEIDENSTVYID 838
+ L+ +++R + + +TV +D
Sbjct: 825 YLQDPLADLILRGSVKDGATVRVD 848
>gi|221632469|ref|YP_002521690.1| chaperone clpB 1 [Thermomicrobium roseum DSM 5159]
gi|221157168|gb|ACM06295.1| chaperone clpB 1 [Thermomicrobium roseum DSM 5159]
Length = 870
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/865 (53%), Positives = 611/865 (70%), Gaps = 30/865 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M +FT K EA+ A A ++Q HL AL++ G+ Q +
Sbjct: 1 MGRPQFTEKAQEALVTAQRTAAERQNSQLDVEHLLYALVTQHDGVVPQVLLRLQLDPRRV 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
AQ ERV ++ LP A E S L +V+ RAQ+ ++ GD +++ + L+L L
Sbjct: 61 AQELERV----LETLPRLQYAA-EPTISPVLRRVLERAQSEAQSFGDQYISTEHLLLAAL 115
Query: 119 ED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
+ S GV RV + ++RG ++V S + ++T+QAL+ YGRDL A
Sbjct: 116 DAAPRSPAVQALARLGVQRERVLEALSQIRG--AQRVTSPNPESTYQALERYGRDLTALA 173
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRD+EIRRV+++L RRTKNNPVLIGEPGVGKTA+VEGLAQRIVRGDVP L
Sbjct: 174 RQGKLDPVIGRDDEIRRVIQVLLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPEGL 233
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D R++ LD+ A++AGAKYRGEFEERLKAVL E+ +EG++I+FIDE+H V+GAG EG+
Sbjct: 234 RDKRIVQLDLAAMLAGAKYRGEFEERLKAVLDEIRASEGEIIVFIDEVHTVVGAGAAEGA 293
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDAAN+ KPMLARG+L IGATTL+EYRK++EKD A ERRFQ V+V EPSV DT+SILRG
Sbjct: 294 MDAANMLKPMLARGELHAIGATTLDEYRKHIEKDPALERRFQPVFVDEPSVEDTISILRG 353
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
L+E+YE HH VRI D ALV AA LS RYIT R LPDKAIDLVDEA A +R+++ S P E+
Sbjct: 354 LRERYELHHKVRILDSALVAAAVLSHRYITNRFLPDKAIDLVDEAAARLRMEITSMPAEL 413
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L R+ QLEIE AL KE+D+AS+ RL E+ +EL +LR++ Q L ++++E++ ++ I
Sbjct: 414 DELTRRITQLEIEREALRKERDEASRQRLAELERELANLREQEQVLRSQWEQERQALERI 473
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTE 530
LK++ E+ +++A R D RA++L+YG + E+E + + E +D + +L E
Sbjct: 474 NALKEQIEQTRIEIEQALRAADYTRASELQYGRLVELERQLREEERRLADVQRQGRLLKE 533
Query: 531 TVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRA 579
V D IAE+VS+WTGIPV +L G+ EK ER++G EAV AV+ ++ R+RA
Sbjct: 534 EVDADDIAEIVSKWTGIPVAKLMEGEMEKLVHMEERLHERVVGQDEAVRAVSNAIRRARA 593
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +P GSF+FLGPTGVGKTELA+ALAE LFDDE +VRIDMSEY E+H+VSRLIGA
Sbjct: 594 GLQDPNRPLGSFIFLGPTGVGKTELARALAEFLFDDERAMVRIDMSEYQERHTVSRLIGA 653
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRRRPYSVVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF
Sbjct: 654 PPGYVGYEEGGQLTEAVRRRPYSVVLFDEIEKAHPEVFNVLLQVLDDGRLTDGQGRTVDF 713
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
RNTVIIMTSNLG+E++ + + + + A ++V+Q VR HFRPE LNR+DEI++F PL+
Sbjct: 714 RNTVIIMTSNLGSEYIQALLPHR--EEEAYERVMQAVRAHFRPEFLNRIDEIIMFRPLTR 771
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
EQL ++ +Q++ V RL +R + L VT A + + YDP+YGARP++R ++++++
Sbjct: 772 EQLSQIVDIQLRQVRQRLKQRNITLQVTLRAKEWLAERGYDPVYGARPLKRVIQRELLDP 831
Query: 820 LSRMLVREEIDENSTVYIDASPKGD 844
L+ ML+R E+ + TV +D G+
Sbjct: 832 LANMLLRGEVRDGETVLVDVDEHGN 856
>gi|310286828|ref|YP_003938086.1| ATP-binding subunit of Clp protease [Bifidobacterium bifidum S17]
gi|309250764|gb|ADO52512.1| ATP-binding subunit of Clp protease [Bifidobacterium bifidum S17]
Length = 887
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/860 (52%), Positives = 598/860 (69%), Gaps = 31/860 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT E I A + A++AG+AQ LH+ ALL +G+ I AGG A A
Sbjct: 4 KFTTMAQEVIGDAIQSASAAGNAQVETLHVMDALLRQENGVIQGLIQAAGGNPQAIGA-- 61
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-- 121
A+ K+P+ + + P AS L + +A+ + GD +++ + L++G+ +
Sbjct: 62 AVRNALVKMPAASGSTTSQPQASRQLTAALAQAEKEMQQMGDEYVSTEHLLIGIAASAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q D+ K GV A ++ V +RG G KV S + +++AL+ Y DL +A GKLD
Sbjct: 122 QSADILKANGVTAAALRKAVPGVRG--GAKVTSPDAEGSYKALEKYSTDLTARAKEGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + +LI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL E++ A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 240 SLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 300 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L+RK
Sbjct: 360 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+ E+E L+K +D ASK RL +++ EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRYEMEEMQLKKAEDPASKERLEKLQNELANTREKLSGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL--------MLTET 531
+ + R +LA A+ + YG I ++ + E +++ M+ +
Sbjct: 480 LDAKRVEADKFTREGNLAEASKILYGEIPAIQKQLDAAEKADAEDGATGEIKPEPMVPDH 539
Query: 532 VGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAG 580
V D +A +VS WTGIPV RL G+NEK +R+IG EA+ AV+++V RSRAG
Sbjct: 540 VDADSVAGIVSEWTGIPVGRLMQGENEKLLSMEDYLGKRVIGQKEAIAAVSDAVRRSRAG 599
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA
Sbjct: 600 ISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIGAA 659
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGY+G+EEGGQLTEAVRRRPYSVVLFDEVEKA+ VF+ LLQVLDDGRLTDGQGRTVDF+
Sbjct: 660 PGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTVDFK 719
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT++IMTSNLG++ L++ M + V+ V +F+PE LNRLDEIV+F PL+ E
Sbjct: 720 NTILIMTSNLGSQFLVNQDM---DADAKKKAVMDAVHMNFKPEFLNRLDEIVMFHPLTRE 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+L + +Q+ VA RL +R + L VTDAA + + YDP YGARP+RR ++ +V +L
Sbjct: 777 ELGGIVNIQVAQVASRLTDRRIKLDVTDAAREWLANTGYDPAYGARPLRRLVQTEVGDQL 836
Query: 821 SRMLVREEIDENSTVYIDAS 840
+RML+ ++ + TV +D +
Sbjct: 837 ARMLLAGKVHDGDTVLVDQT 856
>gi|384440211|ref|YP_005654935.1| hypothetical protein [Thermus sp. CCB_US3_UF1]
gi|359291344|gb|AEV16861.1| hypothetical protein TCCBUS3UF1_18220 [Thermus sp. CCB_US3_UF1]
Length = 854
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/868 (53%), Positives = 603/868 (69%), Gaps = 32/868 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
M D++T EA+A A LA H HL LL DP G+ + + AG + A
Sbjct: 1 MQLDRWTQTAREALAQAQVLARGMKHQAIDLPHLWAVLLRDPGGLAWRLLEKAGADPKAL 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ AER + +LP A + L V RA+A D LA+D L+L L
Sbjct: 61 KEEAER----ELARLPRVEGAEGGQYLTPRLSGVFGRAEALMGELKDRFLALDTLVLALA 116
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
E + G EA K+ + +LRG G+ V++ + T++AL+ YG DL A G
Sbjct: 117 EATP-GLPGPEA------FKAALRELRG--GKTVDTEHAENTYRALEQYGLDLTSLAAQG 167
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRRV++IL RRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L
Sbjct: 168 KLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGK 227
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
R+I+L MG+L+AGAKYRGEFEERLKAV++EV E++G++ILFIDE+H V+GAG+ EG++DA
Sbjct: 228 RIISLQMGSLLAGAKYRGEFEERLKAVIQEVVESQGEIILFIDELHTVVGAGKAEGAVDA 287
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
N+ KP LARG+LR IGATTL+EYR+ +EKD A ERRFQ VYV EPSV DT+SILRG+KE
Sbjct: 288 GNMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPSVEDTISILRGIKE 346
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HHGVRI D A+V AA LS RYIT R LPDKAIDLVDEA A +R+ L+S PEEID L
Sbjct: 347 KYEVHHGVRISDPAIVAAAVLSHRYITERRLPDKAIDLVDEAAARLRMALESAPEEIDAL 406
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
ERK++QLEIE AL+KEKD S RL + +E+ L ++ L ++ E+E + ++R
Sbjct: 407 ERKKLQLEIEREALKKEKDPDSLERLKAIEEEIAHLTQEIAKLRAEWEAEREVLRKLREA 466
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
+ + +E+ ++ AER+YDL RAA+LRYG + +EA + L + E D
Sbjct: 467 QHRLDEVRRQIELAERQYDLNRAAELRYGELPRLEAEVEALSEKLKGARFVRLEVTEED- 525
Query: 537 IAEVVSRWTGIPVTRLGQNEKER-----------LIGLAEAVNAVAESVLRSRAGLGRPQ 585
IAE+VSRWTGIPV RL + E+E+ ++G EA+ AVA+++ R+RAGL P
Sbjct: 526 IAEIVSRWTGIPVARLLEGEREKLLRLEEELHRRVVGQEEAIRAVADAIRRARAGLKDPG 585
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSFLFLGPTGVGKTELAK LA LFD E +VRIDM+EYME+H+VSRLIGAPPGYVG
Sbjct: 586 RPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMVRIDMTEYMEKHAVSRLIGAPPGYVG 645
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGGQLTEAVRRRPY+V+LFDE+EKAH VFN LLQ+LDDGRLTD GRTVDFRNTVII
Sbjct: 646 YEEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNLLLQILDDGRLTDSHGRTVDFRNTVII 705
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
+TSNLG+ +L G+ + R++V +++HFRPE LNRLDEIVVF PL+ EQLR +
Sbjct: 706 LTSNLGSPIILEGIQKGWPYERIREEVFAILQRHFRPEFLNRLDEIVVFRPLTREQLRAI 765
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+Q+ + RLAE+ +AL +T+AA D + +DP++GARP++R + +++ T L++ ++
Sbjct: 766 VEIQLAQLRARLAEKRIALELTEAAKDFLAERGFDPVFGARPLKRVIGRELETPLAKRIL 825
Query: 826 REEIDENSTVYIDASPKGDNLVYRVQKN 853
EI E S V +DA P G L++R ++
Sbjct: 826 AGEIVEGSRVVVDAGPAG--LIFRSEER 851
>gi|311063724|ref|YP_003970449.1| ClpB protein [Bifidobacterium bifidum PRL2010]
gi|310866043|gb|ADP35412.1| ClpB protein [Bifidobacterium bifidum PRL2010]
Length = 887
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/860 (52%), Positives = 598/860 (69%), Gaps = 31/860 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT E I A + A++AG+AQ LH+ ALL +G+ I AGG A A
Sbjct: 4 KFTTMAQEVIGDAIQSASAAGNAQVETLHVMDALLRQENGVIQGLIQAAGGNPQAIGA-- 61
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-- 121
A+ K+P+ + + P AS L + +A+ + GD +++ + L++G+ +
Sbjct: 62 AVRNALVKMPAASGSTTSQPQASRQLTAALAQAEKEMQQMGDEYVSTEHLLIGIAASAPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q D+ K GV A ++ V +RG G KV S + +++AL+ Y DL +A GKLD
Sbjct: 122 QSADILKANGVTAAALRKAVPGVRG--GAKVTSPDAEGSYKALEKYSTDLTARAKEGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L + +LI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL E++ A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 240 SLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 300 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L+RK
Sbjct: 360 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+ E+E L+K +D ASK RL +++ EL + R+KL L R+ EK +++ L+ +
Sbjct: 420 VTRYEMEEMQLKKAEDPASKERLEKLQNELANTREKLSGLKARWDAEKAGHNKVGDLRAQ 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENL--------MLTET 531
+ + R +LA A+ + YG I ++ + E +++ M+ +
Sbjct: 480 LDAKRVEADKFTREGNLAEASKILYGEIPAIQKQLDAAEKADAEDGATGETKPEPMVPDH 539
Query: 532 VGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAG 580
V D +A +VS WTGIPV RL G+NEK +R+IG EA+ AV+++V RSRAG
Sbjct: 540 VDADSVAGIVSEWTGIPVGRLMQGENEKLLSMEDYLGKRVIGQKEAIAAVSDAVRRSRAG 599
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLIGA
Sbjct: 600 ISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIGAA 659
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGY+G+EEGGQLTEAVRRRPYSVVLFDEVEKA+ VF+ LLQVLDDGRLTDGQGRTVDF+
Sbjct: 660 PGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTVDFK 719
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT++IMTSNLG++ L++ M + V+ V +F+PE LNRLDEIV+F PL+ E
Sbjct: 720 NTILIMTSNLGSQFLVNQDM---DADAKKKAVMDAVHMNFKPEFLNRLDEIVMFHPLTRE 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+L + +Q+ VA RL +R + L VTDAA + + YDP YGARP+RR ++ +V +L
Sbjct: 777 ELGGIVNIQVAQVASRLTDRRIKLDVTDAAREWLANTGYDPAYGARPLRRLVQTEVGDQL 836
Query: 821 SRMLVREEIDENSTVYIDAS 840
+RML+ ++ + TV +D +
Sbjct: 837 ARMLLAGKVHDGDTVLVDQT 856
>gi|419244574|ref|ZP_13787210.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9D]
gi|378089111|gb|EHW50958.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9D]
Length = 857
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/846 (52%), Positives = 590/846 (69%), Gaps = 25/846 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ NQA+ +LP ++ S L++V+ + GDT ++ + +L LE
Sbjct: 60 LRTDI-NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDTFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ D+ K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLADILKAAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTIDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +EL D + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEA---AIGQLEGNQSDENLMLTETVGP 534
+ E+ A+++A R DLAR ++L+YG I E+E A QLEG +L V
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR---LLRNKVTD 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
+IAEV++RWTGIPV+R+ ++E+E+L IG EAV+AV+ ++ RSRAGL
Sbjct: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL KALA +FD + +VRIDMSE+ME+HSVSRL+GAPPGY
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV
Sbjct: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ G++ ++ VL V +FRPE +NR+DE+VVF PL + +
Sbjct: 714 VIMTSNLGSD-LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+A++Q+K + RL ERG + ++D AL ++ YDP+YGARP++R +++++ L++
Sbjct: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832
Query: 824 LVREEI 829
++ E+
Sbjct: 833 ILSGEL 838
>gi|365971689|ref|YP_004953250.1| chaperone protein ClpB [Enterobacter cloacae EcWSU1]
gi|365750602|gb|AEW74829.1| Chaperone protein ClpB [Enterobacter cloacae EcWSU1]
Length = 861
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/857 (51%), Positives = 595/857 (69%), Gaps = 25/857 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 5 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAG-INAGQ 63
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S L++V+ + GD ++ + +L LE
Sbjct: 64 -LRTAIDQALSRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 122
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A V +EK+RG G V + QALK + DL E+A GK
Sbjct: 123 RGTLTDLLKSAGATTANVTQAIEKMRG--GESVNDQGAEDQRQALKKFTVDLTERAEQGK 180
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRIV G+VP L R
Sbjct: 181 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRR 240
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 241 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 300
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 301 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 360
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 361 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 420
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL+KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 421 RRIIQLKLEQQALKKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 480
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE-GNQSDENLM--LTETVGP 534
+ E+ A+++A R DLAR ++L+YG I E+E QLE QS+ M L V
Sbjct: 481 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEK---QLEIATQSEGKTMRLLRNKVTD 537
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
++IAEV++RWTGIPV R+ ++E+ +R+IG EAV AV+ ++ RSRAGL
Sbjct: 538 EEIAEVLARWTGIPVARMMESERDKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLSD 597
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGY
Sbjct: 598 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGY 657
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV
Sbjct: 658 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 717
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ G++ +D V+ V FRPE +NR+DE+VVF PL + +
Sbjct: 718 VIMTSNLGSD-LIQERFGELDYGHMKDLVMGVVSHSFRPEFINRIDEVVVFHPLGEKHIA 776
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+A++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++
Sbjct: 777 SIAQIQLQRLYKRLEERGYEIHISDDALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQ 836
Query: 824 LVREEIDENSTVYIDAS 840
++ E+ + ++A+
Sbjct: 837 ILSGELIPGKVIRLEAN 853
>gi|376243676|ref|YP_005134528.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae CDCE 8392]
gi|372106918|gb|AEX72980.1| putative ATP-dependent protease regulatory subunit [Corynebacterium
diphtheriae CDCE 8392]
Length = 849
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/862 (52%), Positives = 598/862 (69%), Gaps = 37/862 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
NP T KT EA+ A + A++AG+ P HL A+L GI + G +
Sbjct: 4 FNP---TTKTQEALQEALQKASAAGNPDIRPEHLLAAILGQEDGIAIPVLRATGVD--PD 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
R + KLP A P + + V+ AQ GD +++ + L+ +
Sbjct: 59 VVRREAETLVAKLPKAEGANLANPNFNRDALSVLNNAQELAGELGDEYVSTEVLLAAVAR 118
Query: 120 DSQ-IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ +L + G +K +RG +KV + S + FQAL+ Y DL +A G
Sbjct: 119 GTNDAAELLTKRGATYDVIKGVFPSVRGN--KKVTTESPEDQFQALEKYSTDLTARAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
K+DPVIGRD+EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLA+RIV GDVP +L
Sbjct: 177 KIDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMD 295
LI+LD+G++VAGAKYRGEFEERLKAVL E++ AEG++I FIDE+H ++GAG T + +MD
Sbjct: 237 TLISLDLGSMVAGAKYRGEFEERLKAVLDEIKSAEGEIITFIDELHTIVGAGATGDSAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A N+ KP+LARG+LR +GATTL+EYRKY+EKDAA ERRFQQV+V EPSV D V ILRGLK
Sbjct: 297 AGNMIKPLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDAVGILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRIQD ALV AA LS RYIT R LPDKAIDLVDEA + +R+++DS P+EID
Sbjct: 357 ERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
LER +LEIE AL KE D ASK RLV++R+EL D R+KL L+ R+ EK I+++R
Sbjct: 417 LERIVRRLEIEEVALSKETDAASKDRLVKLRQELADEREKLGELVARWNNEKGAINKVRE 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
K++ E L + AER D + A+LRYG I E+E + + E + E ML+E V PD
Sbjct: 477 AKEELERLRSESEIAERDGDYGKVAELRYGRIPELEKQVAEAE-EHTVETTMLSEEVTPD 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRP 584
IAEVVS WTGIP ++ Q E E R++G +EAV AV+++V R+RAG+ P
Sbjct: 536 TIAEVVSAWTGIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVADP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+PTGSFLFLGPTGVGKTELAKALAE +FDD+ +VRIDMSEY E+H+V+RL+GAPPGYV
Sbjct: 596 NRPTGSFLFLGPTGVGKTELAKALAEFMFDDDRAMVRIDMSEYGEKHAVARLVGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+++GGQLTEAVRRRPY+VVLFDEVEKAH VF+ LLQVLD+GRLTDGQGRTVDFRNTV+
Sbjct: 656 GYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTVL 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
I+TSNLGA +D+++ V++ F+PE +NRLD++V+FDPLS EQL
Sbjct: 716 ILTSNLGAGG-------------TKDEMMDAVKRAFKPEFVNRLDDVVIFDPLSQEQLTH 762
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+ +A RLA R + LAV+D+A ++ Y+P YGARP+RR +++ + +L++ L
Sbjct: 763 IVEIQIAQLAQRLAARRLTLAVSDSAKLWLVERGYEPAYGARPLRRLIQQAIGDQLAKKL 822
Query: 825 VREEIDENSTVYIDASPKGDNL 846
+ E+ + S V++D + G+NL
Sbjct: 823 LSGEVRDGSEVHVDVADGGENL 844
>gi|19113295|ref|NP_596503.1| heat shock protein Hsp104 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74627046|sp|O94641.1|HS104_SCHPO RecName: Full=Heat shock protein 104; AltName: Full=Protein
aggregation-remodeling factor hsp104
gi|4481954|emb|CAB38512.1| heat shock protein Hsp104 (predicted) [Schizosaccharomyces pombe]
Length = 905
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/867 (50%), Positives = 589/867 (67%), Gaps = 40/867 (4%)
Query: 6 FTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDP----SGIFAQAINNAGGENAAQS 61
FT K + ++ A+ +A S GH+Q TP+H+A ALLSD + + ++ AGG+ Q
Sbjct: 6 FTDKAAKTLSDAYSIAQSYGHSQLTPIHIAAALLSDSDSNGTTLLRTIVDKAGGD--GQK 63
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
ER + +LP+Q P P+++ S K++R A QK D+++A D I +D
Sbjct: 64 FERSVTSRLVRLPAQDPPPEQVTLSPESAKLLRNAHELQKTQKDSYIAQDHFIAVFTKDD 123
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ L EAGV + V +RG ++++S + + F AL + DL E A G+LD
Sbjct: 124 TLKSLLAEAGVTPKAFEFAVNNVRG--NKRIDSKNAEEGFDALNKFTVDLTELARNGQLD 181
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGR++EIRR +R+LSRRTKNNPVLIGEPGVGKT++ EGLA+RI+ DVP+NL++ +L+
Sbjct: 182 PVIGREDEIRRTIRVLSRRTKNNPVLIGEPGVGKTSIAEGLARRIIDDDVPANLSNCKLL 241
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS-MDAAN 298
+LD+G+LVAG+K+RGEFEER+K+VLKEVEE+E +ILF+DE+HL++GAG MDAAN
Sbjct: 242 SLDVGSLVAGSKFRGEFEERIKSVLKEVEESETPIILFVDEMHLLMGAGSGGEGGMDAAN 301
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+L CIGATTL EY+KY+EKDAAFERRFQ + V EPS+ DT+SILRGLKEKY
Sbjct: 302 LLKPMLARGKLHCIGATTLAEYKKYIEKDAAFERRFQIILVKEPSIEDTISILRGLKEKY 361
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV I DRALV AA L++RY+T R LPD AIDLVDEA A VRV +SQPE +DNLER
Sbjct: 362 EVHHGVTISDRALVTAAHLASRYLTSRRLPDSAIDLVDEAAAAVRVTRESQPEVLDNLER 421
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K QL +E+ ALE+EKD+ASK RL RKE + + ++ +P+ +Y+ EK R E++ K+
Sbjct: 422 KLRQLRVEIRALEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKR 481
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE------------GNQSDENL 526
+ +EL ++AERR D AADL+Y I +++ I LE Q
Sbjct: 482 RLDELKAKAEDAERRNDFTLAADLKYYGIPDLQKRIEYLEQQKRKADAEAIANAQPGSEP 541
Query: 527 MLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVL 575
+L + VGPDQI E+V+RWTGIPVTRL EKERL IG EAV AVA ++
Sbjct: 542 LLIDVVGPDQINEIVARWTGIPVTRLKTTEKERLLNMEKVLSKQVIGQNEAVTAVANAIR 601
Query: 576 RSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSR 635
SRAGL P QP SFLF GP+G GKT L KALA +FDDEN ++RIDMSEYME+HSVSR
Sbjct: 602 LSRAGLSDPNQPIASFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKHSVSR 661
Query: 636 LIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGR 695
LIGAPPGYVGHE GGQLTE +RRRPYSV+LFDE+EKA V LLQVLDDGR+T GQG+
Sbjct: 662 LIGAPPGYVGHEAGGQLTEQLRRRPYSVILFDEIEKAAPEVLTVLLQVLDDGRITSGQGQ 721
Query: 696 TVDFRNTVIIMTSNLGAEHLLSGMM---GKVTMQVARDQVLQEVRKHFRPELLNRLDEIV 752
VD +N VIIMTSNLGAE+L + GK+ R+ V+ +R FRPE LNR+ IV
Sbjct: 722 VVDAKNAVIIMTSNLGAEYLTTDNESDDGKID-STTREMVMNSIRGFFRPEFLNRISSIV 780
Query: 753 VFDPLSHEQLRKVARLQMKDVAIRLA--ERGVALAVTDAALDIVLAESYDPIYGARPIRR 810
+F+ L +R + ++ +V RL R + + V+D A D++ + Y P YGARP+ R
Sbjct: 781 IFNRLRRVDIRNIVENRILEVQKRLQSNHRSIKIEVSDEAKDLLGSAGYSPAYGARPLNR 840
Query: 811 WLEKKVVTELSRMLVREEIDENSTVYI 837
++ +V+ ++ +++ ++ + T ++
Sbjct: 841 VIQNQVLNPMAVLILNGQLRDKETAHV 867
>gi|312133769|ref|YP_004001108.1| clpa2 [Bifidobacterium longum subsp. longum BBMN68]
gi|311773050|gb|ADQ02538.1| ClpA2 [Bifidobacterium longum subsp. longum BBMN68]
Length = 889
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/861 (52%), Positives = 603/861 (70%), Gaps = 35/861 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT EA+ A + A++AG+AQ LH+ ALL +G+ I AGG+ A A
Sbjct: 4 KFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDPQAIGA-- 61
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
A+ LPS + + P AS L I +A+ + GD +++ + L++G+ + +
Sbjct: 62 AVRNALVALPSASGSSTSQPQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q ++ ++ GV A ++ V +RG G KV S + +++AL+ Y DL A GKLD
Sbjct: 122 QSAEILEKNGVTAASLRKAVPGVRG--GAKVTSPDAEGSYKALEKYSTDLTAAAKEGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L +LI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQGKKLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL E++ A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 240 SLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 300 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L+RK
Sbjct: 360 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ E+ +++ L+ K
Sbjct: 420 VTRLEMEEMQLKKAEDPASKERLGKLQAELVDTREKLSGLKARWDAEQAGHNKVGDLRAK 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE-----------GNQSDENLML 528
++L + R +LA A+ + YG I ++ + E N +DE M+
Sbjct: 480 LDDLRVQADKYTREGNLAEASKILYGEIPSIQKELAAAESADAESADAGAANPADEP-MV 538
Query: 529 TETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRS 577
+ V D +AE+VS WTGIPV RL G+NEK +R+IG EA+ AV+++V RS
Sbjct: 539 PDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRS 598
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAG+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLI
Sbjct: 599 RAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLI 658
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GA PGYVG+E+GGQLTEAVRRRPYSVVLFDEVEKA+ +F+ LLQVLDDGRLTDGQGRTV
Sbjct: 659 GAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+NT++IMTSNLG++ L++ M + V+ V +F+PE LNRLD+IV+F PL
Sbjct: 719 DFKNTILIMTSNLGSQFLVNEDM---DADAKKKAVMDAVHMNFKPEFLNRLDDIVMFHPL 775
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ E+L + +Q+ V+ RL +R + L VTD+A + + YDP YGARP+RR ++ +V
Sbjct: 776 TREELGGIVDIQVAGVSQRLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVG 835
Query: 818 TELSRMLVREEIDENSTVYID 838
+L+RML+ ++ + TV +D
Sbjct: 836 DQLARMLLAGKVHDGDTVLVD 856
>gi|357416692|ref|YP_004929712.1| ATP-dependent Clp protease subunit [Pseudoxanthomonas spadix
BD-a59]
gi|355334270|gb|AER55671.1| ATP-dependent Clp protease subunit [Pseudoxanthomonas spadix
BD-a59]
Length = 861
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/864 (50%), Positives = 604/864 (69%), Gaps = 22/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M DK T + +A+A A LA H P+HL VALL D SG +A+ G N
Sbjct: 1 MRMDKLTSRFQQALADAQSLAVGRDHNFIEPVHLMVALL-DQSGGSTRALLQQAGVNVPV 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
ER+ ++++ LP T + L +++ + + HGD +A + +L +ED
Sbjct: 60 LRERL-GESLEALPKVTGQAGNLSVGNDLGRLLNQTDKLAQQHGDAFIASEWFVLAAVED 118
Query: 121 S-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ +G + AG +V++ ++K+RG G V+S + + QAL+ Y DL +A GK
Sbjct: 119 NGPLGLALRTAGADKKKVEAAIDKIRG--GESVQSENAEDQRQALEKYTIDLTARAESGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRIV G+VP NL + R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPENLKNKR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+++LDMGAL+AGAK+RGEFEERLK VL ++ ++EG++ILFIDE+H ++GAG+ EGSMDA
Sbjct: 237 VLSLDMGALIAGAKFRGEFEERLKGVLNDLAKSEGQIILFIDELHTMVGAGKAEGSMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYRKY+EKDAA ERRFQ+V+V EPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
Y HHGV I D A+V AA LS RYI R LPDKAIDL+DEA + +R+++DS+PEE+D +E
Sbjct: 357 YAVHHGVEITDPAIVAAATLSHRYIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRME 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL+ + L+KEKD S RL ++ ++D L + L +K EK + R+K
Sbjct: 417 RRLIQLKTQREMLKKEKDAESAKRLADLEADIDTLEREFSDLNEVWKSEKAALQGATRIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
++ E L+ A+RR D AR ++++YG + ++E + + + + E ++ + V ++I
Sbjct: 477 EQIEAARVELEGAQRRQDYARMSEIQYGVLPQLEKQLAEAQAAEQQEFKLVQDRVTAEEI 536
Query: 538 AEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEVVSRWTGIPV+++ G+ EK ER++G EA+ V++SV RSRAGL P +
Sbjct: 537 AEVVSRWTGIPVSKMLEGEREKLLKMEDQLRERVVGQEEAIKVVSDSVRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P+GSFLFLGPTGVGKTEL KALAE LFD ++RIDMSE+ME+HSV+RLIGAPPGYVG+
Sbjct: 597 PSGSFLFLGPTGVGKTELCKALAEFLFDSSEAMIRIDMSEFMEKHSVARLIGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYS++L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVI+M
Sbjct: 657 EEGGYLTEAVRRRPYSLILLDEVEKAHGDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVM 716
Query: 707 TSNLGAEHL--LSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
TSNLG++ + +S + + V+ V+ HFRPE +NRLD+IVVF PL Q+R+
Sbjct: 717 TSNLGSQLIQEMSHDESAESYTKIKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKVQIRQ 776
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+AR+Q++ + RL +RG+ L V+DAAL I+ +DP+YGARP++R ++ ++ L++ +
Sbjct: 777 IARIQLRGLEARLRDRGIGLEVSDAALSILGDIGFDPVYGARPLKRAIQSQLENPLAQKI 836
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ TV +DA+ G LV+
Sbjct: 837 LSGAFVSGDTVQVDAA--GGRLVF 858
>gi|408786051|ref|ZP_11197790.1| ATP-dependent Clp protease, ATP-binding subunit [Rhizobium lupini
HPC(L)]
gi|408487921|gb|EKJ96236.1| ATP-dependent Clp protease, ATP-binding subunit [Rhizobium lupini
HPC(L)]
Length = 874
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/867 (50%), Positives = 593/867 (68%), Gaps = 23/867 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ + + A A + H QF+P H+ LL D G+ A I AGG+ A+
Sbjct: 1 MNIEKYSERVRGFLQSAQTFALAENHQQFSPEHVLKVLLDDEQGMAASLIERAGGD--AK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A + A+ KLP + + + L KV A+ K GD+ + V++L+ L +
Sbjct: 59 EARLANDAALAKLPKVSGGNGGLSLTAPLAKVFSTAEDLAKKAGDSFVTVERLLQALAIE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ K+AGV + + +R +GR +SA+ + F ALK + RDL E+A G
Sbjct: 119 SSASTSASLKKAGVTAQALNQVINDIR--KGRTADSANAEQGFDALKKFARDLTEEAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ G +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 KLMALDMGALIAGAKYRGEFEERLKAVLNEVQSENGGIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVLVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+D L
Sbjct: 357 KYEQHHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL++E D++S RL ++ EL D +K L R++ EK+++ L
Sbjct: 417 DRRIIQLKIEREALKQETDQSSVDRLKKLEDELADTEEKADALTARWQAEKQKLGHAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG-NQSDENLMLTETVGPD 535
K++ +E L A+R RA +L YG I +E + E + S M+ E V D
Sbjct: 477 KKRLDEARNELAIAQRNGQFQRAGELTYGIIPGIEKELAAAEARDSSGAGSMVQEVVTAD 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA VVSRWTGIPV ++ + ++E+L +G EAV AV+++V RSRAGL P
Sbjct: 537 NIAHVVSRWTGIPVDKMLEGQREKLLRMEDELAKSVVGQGEAVQAVSKAVRRSRAGLQDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL K+LA LFDDE +VR+DMSEYME+HSV+RLIGAPPGYV
Sbjct: 597 NRPIGSFIFLGPTGVGKTELTKSLARFLFDDETAMVRLDMSEYMEKHSVARLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+I
Sbjct: 657 GYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTII 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E ++ M + R+ V++ VR HFRPE LNR+D+I++F L +++
Sbjct: 717 IMTSNLGSE-FMTQMGDNDDVDSVRELVMERVRSHFRPEFLNRIDDIILFHRLRRDEMGA 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+K + L +R ++L + + A + + + YDP YGARP++R ++K V L+ M+
Sbjct: 776 IVEIQLKRLVSLLGDRKISLELDEDARNWLANKGYDPAYGARPLKRVIQKAVQDRLAEMI 835
Query: 825 VREEIDENSTVYIDASPKGDNLVYRVQ 851
+ EI + S V + + D L+++V+
Sbjct: 836 LGGEIPDGSRVKVTSGT--DRLLFKVK 860
>gi|116208096|ref|XP_001229857.1| heat shock protein HSP98 [Chaetomium globosum CBS 148.51]
gi|88183938|gb|EAQ91406.1| heat shock protein HSP98 [Chaetomium globosum CBS 148.51]
Length = 925
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/883 (51%), Positives = 611/883 (69%), Gaps = 56/883 (6%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDP----------------SGIFAQ 48
+FT + +A+ A LA H+Q P+HLAVALL DP S +F Q
Sbjct: 6 EFTDRAKKALEDAMVLAEQYAHSQLLPVHLAVALL-DPLPDQSKDQQNVTPGTTSTLFRQ 64
Query: 49 AINNAGGENAAQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHL 108
I A G+ Q +R +++ +LPSQ P P+++ + T V+R+A QK DT++
Sbjct: 65 VIERARGD--PQLFDRALKKSLVRLPSQDPPPEQVSMAPTFNTVLRKAMDLQKVQKDTYI 122
Query: 109 AVDQLILGLLEDSQIGDLFKEAGVAVAR-VKSEVEKLRGKEGRKVESASGDTT--FQALK 165
AVD LI L ED+ I KEA + + ++ + +RG ++V+S + DT + L
Sbjct: 123 AVDHLITALSEDNSIQTALKEANIPKPKLIQDAITTIRGT--KRVDSRNADTEEENENLA 180
Query: 166 TYGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQR 223
+ D+ A GK+DPVIGR+EEIRRVVRILSRRTKNNPVLIGEPGVGKT VVEGLAQR
Sbjct: 181 KFTIDMTAMAREGKMDPVIGREEEIRRVVRILSRRTKNNPVLIGEPGVGKTTVVEGLAQR 240
Query: 224 IVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHL 283
IV DVP NLA +L++LD+GALVAG+KYRGEFEER+K VLKE++E++ ++LF+DEIHL
Sbjct: 241 IVNSDVPDNLAACKLLSLDVGALVAGSKYRGEFEERMKGVLKEIQESKETIVLFVDEIHL 300
Query: 284 VLGAGRT-EGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEP 342
++GAG + EG MDAANL KPMLARGQL CIGATTL EYRKY+EKDAAFERRFQQV V EP
Sbjct: 301 LMGAGSSGEGGMDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVLVKEP 360
Query: 343 SVPDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANV 402
S+P+T+SILRGLKEKYE HHGV I D A+V A+ L+ARY+T R LPD A+DL+DEA A V
Sbjct: 361 SIPETISILRGLKEKYEVHHGVNIADAAIVAASNLAARYLTSRRLPDSAVDLIDEAAAAV 420
Query: 403 RVQLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMR 462
RV +SQPE ID+LER+ QL+IE+HAL +EKD ASKARL + +++ +++ ++L+PL +
Sbjct: 421 RVARESQPEIIDSLERRLRQLKIEIHALTREKDDASKARLAQAKQDAENVEEELRPLREK 480
Query: 463 YKKEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG--- 519
Y++E++R +I+ K K E L ++A R D +RAADL+Y AI E E I +LE
Sbjct: 481 YERERQRGKDIQEAKLKLENLRVKAEDASRVGDHSRAADLQYYAIPEQEQIIRRLEKEKA 540
Query: 520 ------NQSDENL---MLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL---------- 560
N S + M+T+ VGPDQI E+V+RWTGIPVTRL +EKE+L
Sbjct: 541 AADAALNDSGADAGGSMVTDVVGPDQINEIVARWTGIPVTRLKTSEKEKLLHMESVLGRI 600
Query: 561 -IGLAEAVNAVAESVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLL 619
+G EAV +V+ ++ R+GL P QP SFLF GP+G GKT L KALAE LFDD +
Sbjct: 601 VVGQKEAVQSVSNAIRLQRSGLANPNQPP-SFLFCGPSGTGKTLLTKALAEFLFDDPKSM 659
Query: 620 VRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNT 679
+R DMSEY E+HS+SR+IGAPPGYVGH+ GGQLTEA+RR+P+S++LFDEVEKA V
Sbjct: 660 IRFDMSEYQERHSLSRMIGAPPGYVGHDSGGQLTEALRRKPFSILLFDEVEKAAKEVLTV 719
Query: 680 LLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLL--SGMMGKVTMQVARDQVLQEVR 737
LLQ++DDGR+TDGQGR VD RN +++MTSNLGAE+L +G GK+ R+ V+ +R
Sbjct: 720 LLQLMDDGRITDGQGRVVDARNCIVVMTSNLGAEYLARPNGKDGKID-PTTRELVMNALR 778
Query: 738 KHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKDVAIRL--AERGVALAVTDAALDIVL 795
+F PE LNR+ +V+F+ L+ ++RK+ L++ ++ RL +R V + V++AA D +
Sbjct: 779 NYFLPEFLNRISSVVIFNRLTRREIRKIVDLRISEIQKRLFDNDRNVVIRVSEAAKDKLG 838
Query: 796 AESYDPIYGARPIRRWLEKKVVTELSRMLVREEIDENSTVYID 838
A Y P YGARP++R LEK+V+ ++ +++R I + T +D
Sbjct: 839 AAGYSPAYGARPLQRLLEKEVLNRMAILILRGSIRDGETARVD 881
>gi|168186858|ref|ZP_02621493.1| ATP-dependent chaperone ClpB [Clostridium botulinum C str. Eklund]
gi|169295215|gb|EDS77348.1| ATP-dependent chaperone ClpB [Clostridium botulinum C str. Eklund]
Length = 866
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/858 (50%), Positives = 603/858 (70%), Gaps = 21/858 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGE-NAA 59
MN DK T + +++ A+ A H Q +HL AL++ G+ G NA
Sbjct: 1 MNVDKMTVRVQQSLNEAYSEAVKYNHQQVDIIHLFSALVNQEDGLIPNIFEKMGVNINAL 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
++ + +M K+ + I A+ + +V+ +A K D++++V+ ++L +++
Sbjct: 61 RNDLHLELDSMPKVLGEGAQSSGIVATRRINEVLVKADKIAKDFNDSYISVEHVMLAIID 120
Query: 120 ---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ +G L + + + +RG + +V++ + T+ AL YG +L+E A
Sbjct: 121 IDKNGSVGKLLSKFSITKDTFLKVLLDVRGNQ--RVDTQDPEGTYDALAKYGTNLIELAK 178
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRR +RILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP L
Sbjct: 179 KHKLDPVIGRDEEIRRTIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLK 238
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMGAL+AGAKYRGEFEERLKAVLKEV+ ++GK+ILFIDEIH ++GAG+T+G+M
Sbjct: 239 EKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQSSDGKIILFIDEIHTIVGAGKTDGAM 298
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KP+LARG+L CIGATT +EYR+Y+EKD A ERRFQ V V+EP+V DT+SILRGL
Sbjct: 299 DAGNLIKPLLARGELHCIGATTFDEYRQYIEKDKALERRFQTVIVSEPTVDDTISILRGL 358
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHG+RI D A+V AA+LS RYI R+LPDKAIDL+DEA A +R ++DS P E+D
Sbjct: 359 KERFEIHHGIRIHDSAIVAAAKLSHRYIQDRYLPDKAIDLIDEAGAMIRSEIDSLPTELD 418
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK++ LE E AL KE D+ASK RL + KEL DL++K + +Y+KEK I E+R
Sbjct: 419 IIRRKQLMLETEKEALIKENDEASKKRLKTLEKELADLKEKNSEMTAKYEKEKSHILEVR 478
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD--ENLMLTETV 532
LK K ++ +++AER YDL + A L+YG I E+EA + + E + E +L E V
Sbjct: 479 DLKSKLDDARGEVEKAERDYDLNKVAQLKYGTIPELEAKVKEKEEEMQNNYEGALLKEEV 538
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
D+I+E+VS+WTGIPVTRL + EKE+L IG EA AV+ +V+R+RAGL
Sbjct: 539 TEDEISEIVSKWTGIPVTRLVEGEKEKLLRLEDELRKRVIGQDEATVAVSNAVIRARAGL 598
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
++P GSF+FLGPTGVGKTELAK LA LFD E+ ++RIDMSEYME+H+VSRL+G PP
Sbjct: 599 KDERRPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIIRIDMSEYMEKHAVSRLVGPPP 658
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR PYSV+LFDE+EKA+ VFN LQ+LDDGRLTD +G+TVDF+N
Sbjct: 659 GYVGYEEGGQLTEAVRRNPYSVILFDEIEKANDDVFNIFLQILDDGRLTDNKGKTVDFKN 718
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T+IIMTSNLG+ +LL + R++V++ ++ F+PE LNR+D+I++F PL+ E
Sbjct: 719 TIIIMTSNLGSSYLLENKGKDEVDEKVREEVMETLKMRFKPEFLNRIDDIIMFKPLTEEG 778
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
++K+ + M+ V RL ER +++ VTDAA +++ E YDPIYGARP++R++ + T+++
Sbjct: 779 IKKIIDIFMEHVKERLKERNISMEVTDAAKEVLAKEGYDPIYGARPLKRYIGNILETKIA 838
Query: 822 RMLVREEIDENSTVYIDA 839
+ ++ +I + V +DA
Sbjct: 839 KKIIAGDIYDGCKVIVDA 856
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,335,706,218
Number of Sequences: 23463169
Number of extensions: 568519657
Number of successful extensions: 2854085
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13423
Number of HSP's successfully gapped in prelim test: 11752
Number of HSP's that attempted gapping in prelim test: 2733337
Number of HSP's gapped (non-prelim): 71386
length of query: 900
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 748
effective length of database: 8,792,793,679
effective search space: 6577009671892
effective search space used: 6577009671892
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 82 (36.2 bits)