BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046258
(900 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42730|CLPB1_ARATH Chaperone protein ClpB1 OS=Arabidopsis thaliana GN=CLPB1 PE=1 SV=2
Length = 911
Score = 1610 bits (4168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 792/899 (88%), Positives = 852/899 (94%), Gaps = 15/899 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP+KFTHKTNE IA AHELA +AGHAQFTPLHLA AL+SDP+GIF QAI++AGGENAAQ
Sbjct: 1 MNPEKFTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQAISSAGGENAAQ 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
SAERV NQA+KKLPSQ+P PD+IPAS++LIKVIRRAQAAQK+ GDTHLAVDQLI+GLLED
Sbjct: 61 SAERVINQALKKLPSQSPPPDDIPASSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGLLED 120
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDP 180
SQI DL E GVA ARVKSEVEKLRGKEG+KVESASGDT FQALKTYGRDLVEQAGKLDP
Sbjct: 121 SQIRDLLNEVGVATARVKSEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEQAGKLDP 180
Query: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA 240
VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV+GDVP++L DVRLI+
Sbjct: 181 VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLTDVRLIS 240
Query: 241 LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF 300
LDMGALVAGAKYRGEFEERLK+VLKEVE+AEGKVILFIDEIHLVLGAG+TEGSMDAANLF
Sbjct: 241 LDMGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTEGSMDAANLF 300
Query: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG 360
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDT+SILRGLKEKYEG
Sbjct: 301 KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEKYEG 360
Query: 361 HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
HHGVRIQDRAL+ AAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
Sbjct: 361 HHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR 420
Query: 421 MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR 480
MQLEIELHALE+EKDKASKARL+EVRKELDDLRDKLQPL M+Y+KEKERIDEIRRLKQKR
Sbjct: 421 MQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRLKQKR 480
Query: 481 EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAEV 540
EEL+F+LQEAERRYDLARAADLRYGAIQEVE+AI QLEG S+EN+MLTE VGP+ IAEV
Sbjct: 481 EELMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSSEENVMLTENVGPEHIAEV 540
Query: 541 VSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQPTG 589
VSRWTGIPVTRLGQNEKERLIGLA +AVNAV+E++LRSRAGLGRPQQPTG
Sbjct: 541 VSRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRAGLGRPQQPTG 600
Query: 590 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 649
SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG
Sbjct: 601 SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG 660
Query: 650 GQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN 709
GQLTEAVRRRPY V+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRN+VIIMTSN
Sbjct: 661 GQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNSVIIMTSN 720
Query: 710 LGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQ 769
LGAEHLL+G+ GKVTM+VARD V++EVRKHFRPELLNRLDEIVVFDPLSH+QLRKVARLQ
Sbjct: 721 LGAEHLLAGLTGKVTMEVARDCVMREVRKHFRPELLNRLDEIVVFDPLSHDQLRKVARLQ 780
Query: 770 MKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEI 829
MKDVA+RLAERGVALAVTDAALD +LAESYDP+YGARPIRRW+EKKVVTELS+M+VREEI
Sbjct: 781 MKDVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRWMEKKVVTELSKMVVREEI 840
Query: 830 DENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGP-RTDPSQAVKKMK 887
DENSTVYIDA GD LVYRV+ +GG VDA+TG+KSDVLI I NGP R+D +QAVKKM+
Sbjct: 841 DENSTVYIDAGA-GD-LVYRVE-SGGLVDASTGKKSDVLIHIANGPKRSDAAQAVKKMR 896
>sp|Q6F2Y7|CLPB1_ORYSJ Chaperone protein ClpB1 OS=Oryza sativa subsp. japonica GN=CLPB1
PE=2 SV=1
Length = 912
Score = 1513 bits (3918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 760/912 (83%), Positives = 831/912 (91%), Gaps = 18/912 (1%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
MNPD FTHKTNEA+ AHE+A+ AGHAQ TPLHL AL +D GI QAI+ A G +A
Sbjct: 1 MNPDNFTHKTNEALVAAHEIASEAGHAQLTPLHLVAALAADKGGILRQAISQASGGDAGA 60
Query: 60 -QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
S ERV + A+KKLPSQ+P PD +PAST LIKVIRRAQ+AQK GD+HLAVDQL+LGLL
Sbjct: 61 PDSFERVVSGALKKLPSQSPPPDSVPASTALIKVIRRAQSAQKKRGDSHLAVDQLLLGLL 120
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKL 178
EDS I D KEAGV+ ARV++E+EKLRG EGRKVESASGDT FQALKTYGRDLVEQAGKL
Sbjct: 121 EDSLISDCLKEAGVSAARVRAELEKLRGGEGRKVESASGDTNFQALKTYGRDLVEQAGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL DVRL
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
Sbjct: 241 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQV+VAEPSVPDT+SILRGLKEKY
Sbjct: 301 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
EGHHGVRIQDRALVVAAQLSARYI GRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
Sbjct: 361 EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
KR+QLE+E HALEKEKDKASKARLVEV+KELDDLRDKLQPL M+Y+KEKERIDEIR+LKQ
Sbjct: 421 KRIQLEVEHHALEKEKDKASKARLVEVKKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+REEL F LQEAERR DLAR ADL+YGA+QE++ AI +LE +++ ENLMLTETVGP+QIA
Sbjct: 481 RREELQFTLQEAERRMDLARVADLKYGALQEIDVAIAKLE-SETGENLMLTETVGPEQIA 539
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLAEAVN-----------AVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRLGQN+KERL+GLA+ ++ AVAE+VLRSRAGLGRPQQP
Sbjct: 540 EVVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQAEAVSAVAEAVLRSRAGLGRPQQP 599
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV+RLIGAPPGYVGHE
Sbjct: 600 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHE 659
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRPYSV+LFDEVEKAH++VFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT
Sbjct: 660 EGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 719
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLGAEHLL+GM+GK +M+VARD V+QEVR+HFRPELLNRLDEIV+FDPLSHEQLRKVAR
Sbjct: 720 SNLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVAR 779
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
LQMKDVA+RLAERGVALAVTDAALD++L+ SYDP+YGARPIRRW+EK+VVT+LS+ML++E
Sbjct: 780 LQMKDVAVRLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQE 839
Query: 828 EIDENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRT--DPSQAVKK 885
EIDEN TVYIDA+P D L YRV GG V+A TG+KSD+LIQ+PNG T D +QAVKK
Sbjct: 840 EIDENCTVYIDAAPHKDELAYRVDNRGGLVNAETGQKSDILIQVPNGAATGSDAAQAVKK 899
Query: 886 MKIEEIVDDDEM 897
M+I E D+D M
Sbjct: 900 MRIME--DEDGM 909
>sp|Q7NFE9|CLPB_GLOVI Chaperone protein ClpB OS=Gloeobacter violaceus (strain PCC 7421)
GN=clpB PE=3 SV=1
Length = 872
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/855 (53%), Positives = 624/855 (72%), Gaps = 22/855 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K +AI E+A Q HL ALL D G A +I G N +
Sbjct: 5 NPNQFTEKAWDAIVRTTEVAKEYRQQQLESEHLFKALL-DQDGGLAGSIFTKAGVNLTKL 63
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
ERV Q + + P T + +L ++ RA+ +K +GD ++++ L+L +D
Sbjct: 64 GERV-EQFINRQPKLTNPGQSVYLGRSLDALLDRAEGFRKEYGDDFISIEHLVLAFAKDV 122
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G + +E + A++K+ V ++RG + KV S + ++T+++L YGRDL + A GKL
Sbjct: 123 RFGQQILREFSLDEAKLKAVVAQVRGNQ--KVTSQNPESTYESLDKYGRDLTQLAREGKL 180
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L +L
Sbjct: 181 DPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVSGDVPESLQGRKL 240
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AG+KYRGEFEERLKAVL EV ++EG+++LFIDEIH V+GAG T+G+MDA N
Sbjct: 241 IALDMGALIAGSKYRGEFEERLKAVLNEVTKSEGQIVLFIDEIHTVVGAGATQGAMDAGN 300
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +P+V DT+SILRGLKE+Y
Sbjct: 301 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPTVEDTISILRGLKERY 360
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+ R LPDKAIDL+DEA A +++++ S+PE +D ++R
Sbjct: 361 EVHHGVRISDSALVAAAVLSHRYISDRFLPDKAIDLMDEAAAKLKMEITSKPEALDEVDR 420
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L KE D AS+ RL + KEL DL+++ + L +++ EK+ ID+++ +K+
Sbjct: 421 KILQLEMERLSLAKESDAASRDRLERLEKELADLKEEQRSLNAQWQAEKDIIDQVQAVKE 480
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVE----AAIGQLEGNQSDENLMLTETVGP 534
+ +++ +Q+AER YDL RAA+L+YG + E++ AA QL Q+ +L E V
Sbjct: 481 EIDQVNVQIQQAERDYDLNRAAELKYGKLSELQKRLDAADKQLSETQTSGRSLLREEVTE 540
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGR 583
+ IAE++S+WTGIPV++L +E+E R++G EAV V+E++ RSRAGL
Sbjct: 541 EDIAEIISKWTGIPVSKLVASEREKLLHLEDELHKRVVGQEEAVRIVSEAIQRSRAGLAD 600
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA LFDDEN +VRIDMSEYME+HSVSRLIGAPPGY
Sbjct: 601 PNRPIASFIFLGPTGVGKTELAKALASFLFDDENAMVRIDMSEYMEKHSVSRLIGAPPGY 660
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEAVRRRPY+VVLFDE+EKAH VFN LLQVLDDGR+TD QGRT+DF+N V
Sbjct: 661 VGYDEGGQLTEAVRRRPYAVVLFDEIEKAHNDVFNVLLQVLDDGRITDSQGRTIDFKNAV 720
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++ +L + R++V++ ++ HFRPE LNR+D+I++F L +QL
Sbjct: 721 IIMTSNIGSDAILRLGGNDAYYEQMREEVMRAMQVHFRPEFLNRVDDIIIFRNLRRDQLA 780
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ +LQ+ + RLA+R + L +++AA+D ++ YDP+YGARP++R ++ ++V L+R
Sbjct: 781 AIVKLQIARLEKRLADRKITLKLSEAAIDYIVEAGYDPVYGARPLKRAIQNELVNPLARG 840
Query: 824 LVREEIDENSTVYID 838
L++ + ++ T+++D
Sbjct: 841 LLKGDFNDGDTIFVD 855
>sp|Q72AW6|CLPB_DESVH Chaperone protein ClpB OS=Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB 8303) GN=clpB PE=3
SV=1
Length = 865
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/875 (53%), Positives = 626/875 (71%), Gaps = 34/875 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT K+ +A+A A +A GH + HLA AL+ G+ + ++ G + A
Sbjct: 1 MDIGKFTEKSQQALAEAQNIAVRFGHQEVDAEHLADALVRQEQGLVPRLLDRMGQKPEA- 59
Query: 61 SAERVFNQAMKKLPSQTPA-------PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQL 113
F +A+++ + PA P +I S L V+ +AQ + D +++V+ +
Sbjct: 60 -----FAEALERELGKRPAVSGPGAAPGQIFVSKRLNAVLVKAQDFARQLKDEYVSVEHI 114
Query: 114 ILGLLED---SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRD 170
LLE+ + +G + +E ++ +V +E +RG + +V SA+ + T++AL+ YGRD
Sbjct: 115 FCVLLEEPASTIMGRIAREFSLSREKVLGVLEDVRGSQ--RVTSANPEDTYEALQKYGRD 172
Query: 171 LVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGD 228
LVE+A GKLDPVIGRD EIRRV+RILSRRTKNNPVLIGE GVGKTA+VEGLA RI++GD
Sbjct: 173 LVEEARKGKLDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIVEGLAHRILKGD 232
Query: 229 VPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAG 288
VP L + L ALDMGAL+AGAKYRGEFEERLKAVLKEVE++EG++I+FIDE+H ++GAG
Sbjct: 233 VPEGLKERGLFALDMGALIAGAKYRGEFEERLKAVLKEVEKSEGRIIMFIDELHTIVGAG 292
Query: 289 RTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTV 348
+T+G+MDA+NL KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQ V V EP++ D +
Sbjct: 293 KTDGAMDASNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVDEPTIEDAI 352
Query: 349 SILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDS 408
SILRGLKE++E HHGVRI D A+V A LS RYIT R LPDKAIDL+DEA A +R ++DS
Sbjct: 353 SILRGLKERFEVHHGVRISDSAIVEAVTLSHRYITDRQLPDKAIDLIDEAAALIRTEIDS 412
Query: 409 QPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKE 468
P ++D RK MQLEIE AL +E D AS+ RL + EL DLR + L+ ++++EK
Sbjct: 413 LPADLDEANRKIMQLEIEREALRRETDVASRERLERLENELADLRAEQTALLSQWEREKG 472
Query: 469 RIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLML 528
ID +R +K+ E A++EAER YDL RAA+L+Y + E+E + E DE +L
Sbjct: 473 SIDHVRSIKEDIERTRHAIEEAERAYDLNRAAELKYSRLLELERQLESAEKGGHDETRLL 532
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRS 577
E V PD IAE+V+RWTGIPVTRL ++E+E+L+ LA EAV+AV+E+VLR+
Sbjct: 533 KEEVRPDDIAEIVARWTGIPVTRLLESEREKLLRLADVLHERVVGQEEAVDAVSEAVLRA 592
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGL P +P GSF+FLGPTGVGKTEL K LAE LFD E +VR+DMSEYME+H+V+RLI
Sbjct: 593 RAGLSDPSRPIGSFIFLGPTGVGKTELCKTLAEALFDTEENIVRLDMSEYMEKHAVARLI 652
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG++EGGQLTEAVRR+PYSVVLFDEVEKAH VFNTLLQ+LDDGRLTD GRTV
Sbjct: 653 GAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTDSHGRTV 712
Query: 698 DFRNTVIIMTSNLGAEHLLSGMM-GKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
DFRNT+IIMTSN+G+ ++L G+ G + R++V++E+R+HFRPE LNR+DE V+F P
Sbjct: 713 DFRNTIIIMTSNIGSPYMLDGISEGGEFLSGVREKVMEELRRHFRPEFLNRVDETVLFKP 772
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L Q+ ++ L + + RLAER + + + D A D + +YDP+YGARP+RR+L+ +
Sbjct: 773 LLPAQIARIVELLLGRLRGRLAERKIDIRLGDVARDFIAKAAYDPVYGARPLRRYLQHNI 832
Query: 817 VTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T L+R L+ E+ + +TV +D D L +R++
Sbjct: 833 ETPLARKLIAGELRDGTTVEVDVV--DDALSFRIE 865
>sp|Q8YM56|CLPB2_NOSS1 Chaperone protein ClpB 2 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=clpB2 PE=3 SV=2
Length = 872
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/858 (51%), Positives = 626/858 (72%), Gaps = 29/858 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSD---PSGIFAQAINNAGGENA 58
NP++FT K EAIA E+A Q HL ALL SGI +A G N
Sbjct: 5 NPNQFTEKAWEAIAHTPEIAKQHQQQQIESEHLMKALLEQDGLASGILTKA-----GVNL 59
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++R Q +++ P + + +L ++ RA+A +K D +++++ L+L
Sbjct: 60 QKISDRT-EQYIQRQPKVSGNSTSVYLGRSLDTLLDRAEAHRKDFQDEYISIEHLLLAYP 118
Query: 119 EDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D + G LF+E + +++K+ ++++RG + V + + +Q+L+ YGRDL E A
Sbjct: 119 KDDRFGKGLFQEFALDESKLKNIIKQVRGSQ--TVTDQNPEGKYQSLEKYGRDLTEAARK 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
G+LDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV GDVP +L D
Sbjct: 177 GQLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LI+LDMGA++AGAK+RGEFEERLKAVLKEV E+ G ++LFIDEIH V+GAG T+G+MD
Sbjct: 237 RKLISLDMGAMIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLK
Sbjct: 297 AGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGV+I D +LV AA LS+RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D
Sbjct: 357 ERYEVHHGVKISDSSLVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDE 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +L+KE D AS+ RL + KEL DL+++ + L +++ EK+ I++++
Sbjct: 417 IDRKILQLEMEKLSLQKESDAASRERLERLEKELADLKEEQRTLNTQWQSEKDVINKLQS 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTET 531
+K++ +++ +Q+AER YDL RAA+L+YG + + +EA +L Q +L E
Sbjct: 477 VKEEIDKVNLEIQQAERNYDLNRAAELKYGNLTDLHRRLEATERELSQTQGTGKSLLREE 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V IAE++S+WTGIP+++L ++EKE+L IG EAV AVA+++ RSRAG
Sbjct: 537 VTEADIAEIISKWTGIPISKLVESEKEKLLHLEDELHHRVIGQDEAVTAVADAIQRSRAG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +PT SF+FLGPTGVGKTELAKALA +FD E+ LVRIDMSEYME+H+VSRLIGAP
Sbjct: 597 LADPNRPTASFVFLGPTGVGKTELAKALASYMFDTEDALVRIDMSEYMEKHAVSRLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTE +RRRPY+V+LFDE+EKAH VFN LQ+LDDGR+TD QG TVDF+
Sbjct: 657 PGYVGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDFK 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NT+IIMTSN+G++++L R +V++ +R FRPE LNR+DE+++F L +
Sbjct: 717 NTIIIMTSNIGSQYILDIAGDNSRYDEMRHRVMEAMRNSFRPEFLNRIDEVIIFHSLDKK 776
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+LR++ +LQ++ + RL +R ++L ++D ALD + YDP++GARP++R +++++ T++
Sbjct: 777 ELRQIVQLQVERLKARLDDRKISLRLSDVALDFLAEVGYDPVFGARPLKRAIQRELETQI 836
Query: 821 SRMLVREEIDENSTVYID 838
++ ++R E ++ T+++D
Sbjct: 837 AKAILRGEFNDGDTIFVD 854
>sp|Q826F2|CLPB2_STRAW Chaperone protein ClpB 2 OS=Streptomyces avermitilis (strain ATCC
31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=clpB2 PE=3 SV=1
Length = 879
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/863 (53%), Positives = 613/863 (71%), Gaps = 29/863 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ ++ T K+ EA+ A A GH + HL +ALL G+ + + AG E
Sbjct: 1 MDMNRLTQKSQEALQEAQTAAGRMGHTEVDGEHLLLALLDQEDGLIPRLLQQAGTEPKEL 60
Query: 61 SAERVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
A + + P T AP ++ + L +++ A+ K D +++V+ L+L L
Sbjct: 61 RA--AVREELSHRPKATGPGAAPGQVFVTQRLARLLDAAEREAKRLKDEYVSVEHLLLAL 118
Query: 118 LEDSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+S G L K+AG+ S + ++RG + +V SA+ + ++AL+ YGRDLV +
Sbjct: 119 AEESSSTAAGLLLKQAGITRDSFLSALTQVRGNQ--RVTSANPEVAYEALEKYGRDLVLE 176
Query: 175 A--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
A G+LDPVIGRD EIRRV +ILSR+TKNNPVLIG+PGVGKTA+VEGLAQRIVRGDVP
Sbjct: 177 ARSGRLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDMG+LVAGAKYRGEFEERLKAVL EV+ AEG+++LF+DE+H V+GAG EG
Sbjct: 237 LRDKTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAEGRILLFVDELHTVVGAGAAEG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L IGATTL+EYRK++EKDAA ERRFQQV V EPSV DT+SILR
Sbjct: 297 AMDAGNMLKPMLARGELHMIGATTLDEYRKHIEKDAALERRFQQVLVDEPSVEDTISILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GL+E+ E HGV+IQD ALV AA LS RYIT R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 357 GLRERLEVFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ +LEIE AL KE D ASK RL E+R+EL DLR + +++ E++ I
Sbjct: 417 LDEITRRVTRLEIEEAALSKESDPASKTRLEELRRELADLRGEADAKHAQWEAERQAIRR 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIG----QLEGNQSDENLML 528
++ L+Q+ E++ +EAER YDL RAA+LRYG +Q++E + QL Q EN +L
Sbjct: 477 VQELRQELEQVRHEAEEAERAYDLNRAAELRYGRLQDLERRLAAEEEQLAAKQG-ENRLL 535
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRS 577
E V ++IAE+V+ WTGIPV RL + E +ER+IG EAV V ++++R+
Sbjct: 536 REVVTEEEIAEIVAAWTGIPVARLQEGEREKLLRLDEILRERVIGQDEAVKLVTDAIIRA 595
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
R+G+ P++P GSF+FLGPTGVGKTELAK LA LFD E +VR+DMSEY E+H+VSRL+
Sbjct: 596 RSGIRDPRRPIGSFIFLGPTGVGKTELAKTLARTLFDSEENMVRLDMSEYQERHTVSRLM 655
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+EEGGQLTEAVRR+PYSVVLFDE+EKAH VFNTLLQ+LDDGR+TD QGRTV
Sbjct: 656 GAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHTDVFNTLLQILDDGRITDAQGRTV 715
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQV-ARDQVLQEVRKHFRPELLNRLDEIVVFDP 756
DFRNTVIIMTSN+G+EHLL G + ++ AR V+ E+R HFRPE LNR+D+IV+F P
Sbjct: 716 DFRNTVIIMTSNIGSEHLLDGATAEGEIKPDARALVMGELRGHFRPEFLNRVDDIVLFKP 775
Query: 757 LSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKV 816
L Q+ ++ LQ ++ RLAER + + +TDA +++ + YDP+YGARP+RR++ +V
Sbjct: 776 LGERQIERIVELQFDELRQRLAERRITVELTDAGREVIAHQGYDPVYGARPLRRYISHEV 835
Query: 817 VTELSRMLVREEIDENSTVYIDA 839
T + R L+R ++ + +TV +DA
Sbjct: 836 ETLVGRALLRGDVQDGATVRVDA 858
>sp|P74361|CLPB2_SYNY3 Chaperone protein ClpB 2 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=clpB2 PE=3 SV=1
Length = 872
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/857 (52%), Positives = 623/857 (72%), Gaps = 23/857 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
+P+KFT K EAIA E+A Q HL ALL + +G+ A +I N G + +
Sbjct: 5 DPNKFTEKAWEAIAKTPEIAKQHRQQQIETEHLLSALL-EQNGL-ATSIFNKAGASIPRV 62
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
++V N + + P + + I +L K++ A+ A+ +GD +++++ L+ +D
Sbjct: 63 NDQV-NSFIAQQPKLSNPSESIYLGRSLDKLLDNAEIAKSKYGDDYISIEHLMAAYGQDD 121
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
++G +L++E G+ ++ ++++RG + KV + + +++L+ YGRDL E A GKL
Sbjct: 122 RLGKNLYREIGLTENKLAEIIKQIRGTQ--KVTDQNPEGKYESLEKYGRDLTELAREGKL 179
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEE+RR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ DVP +L D +L
Sbjct: 180 DPVIGRDEEVRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINHDVPESLRDRKL 239
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
I+LDMGAL+AGAKYRGEFEERLKAVLKEV +++G++ILFIDEIH V+GAG T+G+MDA N
Sbjct: 240 ISLDMGALIAGAKYRGEFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGATQGAMDAGN 299
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG LRCIGATTL+EYRKY+EKDAA ERRFQ+V V EP+V DT+SILRGLKE+Y
Sbjct: 300 LLKPMLARGALRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVLDTISILRGLKERY 359
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LS RYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 360 EVHHGVKIADSALVAAAMLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVDR 419
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L++E D ASK RL ++ KEL D +++ L +++ EK ID+IR +K+
Sbjct: 420 KILQLEMERLSLQRENDSASKERLEKLEKELADFKEEQSKLNGQWQSEKTVIDQIRTVKE 479
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+++ +Q+A+R YD +AA+L+YG + ++VEA QL Q+ +L E V
Sbjct: 480 TIDQVNLEIQQAQRDYDYNKAAELQYGKLTDLQRQVEALETQLAEQQTSGKSLLREEVLE 539
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIP+++L ++EKE+L IG EAV AVAE++ RSRAGL
Sbjct: 540 SDIAEIISKWTGIPISKLVESEKEKLLHLEDELHSRVIGQDEAVTAVAEAIQRSRAGLSD 599
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PT SF+FLGPTGVGKTELAKALA+ LFD E LVRIDMSEYME+H+VSRL+GAPPGY
Sbjct: 600 PNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEYMEKHAVSRLMGAPPGY 659
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEA+RRRPYSV+LFDE+EKAH VFN +LQ+LDDGRLTD QG VDF+NT+
Sbjct: 660 VGYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNVMLQILDDGRLTDAQGHVVDFKNTI 719
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSNLG++++L + R +V+ +R++FRPE LNR+DE ++F L +LR
Sbjct: 720 IIMTSNLGSQYILDVAGDDSRYEEMRSRVMDVMRENFRPEFLNRVDETIIFHGLQKSELR 779
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+ ++Q++ +A RL E+ + L +TD ALD + A YDP+YGARP++R ++K + T +++
Sbjct: 780 SIVQIQIQSLATRLEEQKLTLKLTDKALDFLAAVGYDPVYGARPLKRAVQKYLETAIAKG 839
Query: 824 LVREEIDENSTVYIDAS 840
++R + T+ +D +
Sbjct: 840 ILRGDYKPGETIVVDET 856
>sp|Q97KG0|CLPB_CLOAB Chaperone protein ClpB OS=Clostridium acetobutylicum (strain ATCC
824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=clpB PE=3 SV=1
Length = 865
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/859 (50%), Positives = 609/859 (70%), Gaps = 22/859 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
M+ DK T K +AI +A H Q +HL +A++S G+ + G E
Sbjct: 1 MDVDKLTLKVQQAINDCQTIAVRYNHQQIDTIHLFMAIISQEDGLIPNILGKMGADVETV 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ E ++ M K+ + I A+ +V R + + D +++V+ ++L L+
Sbjct: 61 KRDTEAELDR-MPKVLGEGAQNASIYATRRFEEVFVRGEKISRDFKDLYISVEHVMLALM 119
Query: 119 E-DS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ DS I + + ++ + ++RG + +V+++ + T+ AL YGRDLV+ A
Sbjct: 120 DIDSGAIKSILDKNNISKKEFLKALREVRGNQ--RVDTSDPEGTYDALNKYGRDLVKDAK 177
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRRV+RILSRRTKNNPVLIGEPGVGKTA+VEGLA+RIVRGDVP L
Sbjct: 178 KHKLDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLK 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMG+LVAGAKYRGEFEERLKAVLKEVE +EGK+ILFIDEIH ++GAG+TEG+M
Sbjct: 238 NKIIFSLDMGSLVAGAKYRGEFEERLKAVLKEVERSEGKIILFIDEIHTIVGAGKTEGAM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATT +EYRKY+EKD A ERRFQ+V + EP+V D +SILRGL
Sbjct: 298 DAGNIIKPMLARGELHCIGATTFDEYRKYIEKDKALERRFQKVQIDEPTVDDAISILRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGVRI D A+V AA+LS RYITGR LPDKAIDL+DEA A VR+++DS P E+D
Sbjct: 358 KERFEIHHGVRIHDNAIVAAAKLSDRYITGRFLPDKAIDLIDEAGAMVRMEIDSMPTELD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
L+RK Q+EIE AL KE DK S+ RL ++KEL DL+DK + + +Y KEK +I I+
Sbjct: 418 MLKRKIFQMEIEKEALSKESDKFSRERLESIQKELSDLKDKDKAMTAKYDKEKAQIQGIK 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG--NQSDENLMLTETV 532
LK K +E+ +++AER YDL +AA+L+YG + ++E I + E Q+ +N ML E V
Sbjct: 478 ELKTKLDEIRGQIEKAEREYDLNKAAELKYGEVPKLEHEIEEKENLIKQNGQNAMLKEEV 537
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGL 581
+Q++ +VS+WTGIPV++L + E+ +R++G EAV +VA++V+R+RAGL
Sbjct: 538 TEEQVSNIVSKWTGIPVSKLVEGERNKLMRLSDELEKRVVGQTEAVKSVADAVIRARAGL 597
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
+P GSF+FLGPTGVGKTELAK LA +FD E+ ++RIDMSEYME++SVSRLIG+PP
Sbjct: 598 KDMSKPIGSFIFLGPTGVGKTELAKTLARVMFDSEDNIIRIDMSEYMEKYSVSRLIGSPP 657
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+ DDGRLTD +G T+DF+N
Sbjct: 658 GYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHSDVFNIFLQIFDDGRLTDNKGNTIDFKN 717
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
++IIMTSN+G+EHLL+ + +D+V+ E++ F+PE LNRLD+I++F PLS +
Sbjct: 718 SIIIMTSNIGSEHLLNNKGVSNVDEETKDKVMNELKGRFKPEFLNRLDDIIMFKPLSINE 777
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ + ++++ +L E+ + + + + A I+ E YDP+YGARP++R++E + T ++
Sbjct: 778 IGKIIDIFLENIKSKLKEKNIKIDIAEEAKKIIAEEGYDPVYGARPLKRYIENTIETHIA 837
Query: 822 RMLVREEIDENSTVYIDAS 840
+M + EI E + I+ S
Sbjct: 838 KMFISGEISEGDILKIEGS 856
>sp|Q6N1H2|CLPB_RHOPA Chaperone protein ClpB OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=clpB PE=3 SV=1
Length = 879
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/855 (53%), Positives = 606/855 (70%), Gaps = 22/855 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A LA GH QF+PLH+ LL D G+ I+ AGG ++
Sbjct: 1 MNVEKYTERVRGFIQSAQSLAMREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGN--SR 58
Query: 61 SAERVFNQAMKKLPSQT-PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ + +A+ K+P + ++ + + A+ A + GD+ + V++L+L L
Sbjct: 59 AILKATEEALGKMPKVSGSGAGQVYLAPATARAFDAAEKAAEKAGDSFVTVERLLLALSL 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+DS+ G L + GV + + + LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 DKDSEAGQLLTKGGVTPQNLNAAINALR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RI+ GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV AEG +ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLALDMGALIAGAKYRGEFEERLKAVLNEVTAAEGGIILFIDEMHTLVGAGKADGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRIADSALVAAVTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L+IE AL+KE D SKARLV + KEL DL +K L R+ EK ++ + ++
Sbjct: 417 MDREIVRLKIEQEALKKETDPGSKARLVTLEKELADLEEKSAALTQRWSAEKNKLSDAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + RA +L YG I E+E I ++E N+ + M+ E V +
Sbjct: 477 LKSELDALRIELANAQRRGEYQRAGELAYGRIPELEKKIAEIEANE-NSGAMVEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EKE+L +G EAV+AV+ +V R+RAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKEKLLRMEEQLGQRVVGQFEAVHAVSTAVRRARAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LFDDE +VRIDMSE+ME+HSV+RLIGAPPGYV
Sbjct: 596 NRPMGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDMSEFMEKHSVARLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
+MTSNLG+E+L++ G+ T V R+QV+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 VMTSNLGSEYLVNQPEGEDTGAV-REQVMGMVRAHFRPEFLNRVDEIILFHRLQKSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L +R + L + AA D + + +DP YGARP++R +++ V L+ M+
Sbjct: 775 IVDIQFARLTKLLEDRKIVLDLDAAARDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMI 834
Query: 825 VREEIDENSTVYIDA 839
+ + + V I A
Sbjct: 835 LEGSVKDGDHVAISA 849
>sp|P53533|CLPB1_SYNE7 Chaperone protein ClpB 1 OS=Synechococcus elongatus (strain PCC
7942) GN=clpB1 PE=2 SV=3
Length = 874
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/868 (50%), Positives = 631/868 (72%), Gaps = 29/868 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA-- 59
NP++FT K EAI ++A A H Q HL +ALL +P G+ + AG E A
Sbjct: 5 NPNQFTEKAWEAIVRTTDVAKQAQHQQIESEHLFLALLQEP-GLALNILKKAGLEAAQLQ 63
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
Q ER + + P + + +L +++ +A +K GD ++V+ LIL
Sbjct: 64 QFTERF----IARQPKVSGGNQSVYLGRSLDQLLDQADQFRKDFGDEFISVEHLILSFPR 119
Query: 120 DSQIGDLF-KEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
DS+ G L +E V +++ ++++RG + KV + + ++AL+ YGRDL E A G
Sbjct: 120 DSRFGRLLSQEFKVDEKQLRQIIQQIRGSQ--KVTDQNPEGKYEALEKYGRDLTEMARRG 177
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L D
Sbjct: 178 KLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPQSLKDR 237
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RLIALDMGAL+AGAK+RGEFEERLKAVLKEV ++EG +ILFIDEIH V+GAG +GSMDA
Sbjct: 238 RLIALDMGALIAGAKFRGEFEERLKAVLKEVTDSEGIIILFIDEIHTVVGAGAVQGSMDA 297
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
NL KPMLARG+LRCIGATTL+EYR+Y+EKDAA ERRFQQV+V +P+V DT+SILRGLKE
Sbjct: 298 GNLLKPMLARGELRCIGATTLDEYRQYIEKDAALERRFQQVFVDQPTVEDTISILRGLKE 357
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HHGVRI D ALV AA LS RYI+ R LPDKAIDLVDE+ A +++++ S+PEE+D +
Sbjct: 358 RYEVHHGVRISDNALVAAAVLSTRYISDRFLPDKAIDLVDESAARLKMEITSKPEELDEI 417
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+RK +QLE+E +L+KE D AS+ RL + KEL DL+++ + L +++ EK+ I +I+ +
Sbjct: 418 DRKILQLEMERLSLQKESDLASQERLQRLEKELADLKEEQRSLSSQWQAEKDVITDIQSV 477
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG----NQSDENLMLTETV 532
K++ +++ +Q+AER YDL +AA+L+YG + E++ + ++EG + +L E V
Sbjct: 478 KEEIDQVNLLIQQAERDYDLNKAAELKYGKLTELQRKLNEMEGGLATTHTSGKSLLREEV 537
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGL 581
IAE++S+WTGIPV++L ++E +R+IG EAV+AVA+++ RSRAGL
Sbjct: 538 TEVDIAEIISKWTGIPVSKLVESEMQKLLNLDEELHQRVIGQEEAVSAVADAIQRSRAGL 597
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
P++P SF+FLGPTGVGKTELAKALA LFD E+ ++RIDMSEYME+H+VSRLIGAPP
Sbjct: 598 SDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIGAPP 657
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG++EGGQLTEAVRRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD +GRTVDF+N
Sbjct: 658 GYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSRGRTVDFKN 717
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
T++I+TSN+G++++L + R +V + +R +FRPE LNR+DE ++F L +Q
Sbjct: 718 TILILTSNIGSQYILDVAGDDSRYEEMRSRVTEALRANFRPEFLNRVDETIIFHSLRKDQ 777
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
L+++ R+Q+ + RL++R ++L+++ A+D ++ +DP+YGARP++R +++++ T ++
Sbjct: 778 LQQIVRIQLHRLEERLSDRKLSLSMSPEAIDFLVEIGFDPVYGARPLKRVIQRELETAIA 837
Query: 822 RMLVREEIDENSTVYIDASPKGDNLVYR 849
+ ++R + + T+ + + + + LV++
Sbjct: 838 KAILRGQFSDGDTIQV--AVENERLVFK 863
>sp|Q8DJ40|CLPB1_THEEB Chaperone protein ClpB 1 OS=Thermosynechococcus elongatus (strain
BP-1) GN=clpB1 PE=3 SV=1
Length = 871
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/868 (51%), Positives = 627/868 (72%), Gaps = 25/868 (2%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
NP++FT K AIA +LA A H HL +LL + G+ Q AG + Q
Sbjct: 5 NPNQFTEKAWAAIARTPDLAKQAQHQNLESEHLMKSLL-EQEGLATQIFQKAGC--SVQR 61
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ ++ + + P + P + +L K++ RA+ A+K GD ++++ L+L +D
Sbjct: 62 IRDLTDEFISRQP-KISHPSGVYLGQSLDKLLDRAEEARKQFGDEFISIEHLVLAFAQDD 120
Query: 122 QIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGKL 178
+ G LF++ G++ ++ ++++RG + KV + + + AL+ YGRDL + + GKL
Sbjct: 121 RFGKKLFQDIGLSEKVLREAIQQIRGSQ--KVTDQNPEGKYAALEKYGRDLTLLARQGKL 178
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV DVP +L D +L
Sbjct: 179 DPVIGRDDEIRRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVARDVPDSLRDRQL 238
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFEERLKAVLKEV ++ G++ILFIDEIH V+GAG T+G+MDA N
Sbjct: 239 IALDMGALIAGAKYRGEFEERLKAVLKEVTDSNGQIILFIDEIHTVVGAGATQGAMDAGN 298
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQVYV +PSV DT+SILRGLKE+Y
Sbjct: 299 LLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERY 358
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV+I D ALV AA LSARYI+ R LPDKAIDLVDEA A +++++ S+PEE+D ++R
Sbjct: 359 EIHHGVKISDTALVAAATLSARYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDR 418
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K +QLE+E +L+KE AS+ RL ++ +EL DL+++ L +++ EKE ID ++ +K+
Sbjct: 419 KILQLEMERLSLQKETSAASRDRLEKLERELADLKEEQSRLNAQWQAEKEVIDRLQSIKE 478
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN----QSDENLMLTETVGP 534
+ E++ +Q+AER YDL RAA+L+YG + E+ + + E Q +L + V
Sbjct: 479 EIEKVNIEIQQAERNYDLNRAAELKYGKLTELHKKLAEAEAKLREIQVGGRSLLRDEVTE 538
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
IAE++S+WTGIPV++L ++E ++L +G EAV+AVAE++ RSRAGL
Sbjct: 539 ADIAEIISKWTGIPVSKLVESEAQKLLHLEEELHKRVVGQDEAVSAVAEAIQRSRAGLAD 598
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+FLGPTGVGKTELAKALA +FD E LVRIDMSEYME+H+VSRLIGAPPGY
Sbjct: 599 PNRPIASFIFLGPTGVGKTELAKALAAFMFDTEEALVRIDMSEYMEKHAVSRLIGAPPGY 658
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG++EGGQLTEA+RRRPY+VVLFDE+EKAH VFN LQ+LDDGR+TD QGRTVDF+NT+
Sbjct: 659 VGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVFLQILDDGRVTDSQGRTVDFKNTI 718
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
IIMTSN+G++++L ++V++ +R HFRPE LNR+DE ++F L +QLR
Sbjct: 719 IIMTSNIGSQYILDVAGDDSRYSEMYNRVMEAMRAHFRPEFLNRVDEFIIFHSLRKDQLR 778
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
++ +LQ++ + RL++R + L++T+ A+D + YDP+YGARP++R ++K++ T +++
Sbjct: 779 QIVQLQVQRLQQRLSDRHITLSLTEKAIDFLAEVGYDPVYGARPLKRAIQKQLETPIAKA 838
Query: 824 LVREEIDENSTVYIDASPKGDNLVYRVQ 851
++R + + T+ +D + + L +R Q
Sbjct: 839 ILRGDFFDGDTILVDVG-EDERLSFRRQ 865
>sp|Q7CEG6|CLPB_BRUSU Chaperone protein ClpB OS=Brucella suis biovar 1 (strain 1330)
GN=clpB PE=2 SV=1
Length = 874
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/864 (52%), Positives = 603/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+ +DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMHVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E+L +G EAV A++++V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 835 LGDILDGSLVKITAG--SDRLNFR 856
>sp|Q8YJ91|CLPB_BRUME Chaperone protein ClpB OS=Brucella melitensis biotype 1 (strain 16M
/ ATCC 23456 / NCTC 10094) GN=clpB PE=3 SV=2
Length = 874
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/864 (52%), Positives = 603/864 (69%), Gaps = 23/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T + I A A S+G+ QFTP H+ L+ D G+ A + AGG
Sbjct: 1 MNIEKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGR--VG 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A++KLP + D++ S L KV A+ GD+ + V++L+ L +
Sbjct: 59 DVRMGLQSALEKLPKVSGGNDQLYLSQPLAKVFSLAEELASKAGDSFVTVERLLTALAME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ ++ AGV + + +R +GR +SAS ++ + ALK Y RDL E +AG
Sbjct: 119 KSAKTSEILSAAGVTPTALNRVINDMR--KGRTADSASAESNYDALKKYARDLTEDARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ A G++ILFIDE+H ++GAG+T+G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTLEEYRKYVEKDAA RRFQ V+V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VR+ D ALV AA LS RYIT R LPDKAIDLVDEA + +R+Q+DS+PEE+D +
Sbjct: 357 KYEQHHKVRVSDSALVAAAMLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RL + KEL DL ++ L +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ EE AL A+R + +A +L YG I ++E + E +Q ++ +L ETV PD
Sbjct: 477 KRQLEEARNALAIAQRNGEFQKAGELAYGTIPQLEKQLADAE-SQENKGSLLEETVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLGRPQ 585
+A+V+SRWTGIPV R+ + E+E R++G EAV A++++V R+RAGL P
Sbjct: 536 VAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LF D+ +VRIDMSE+ME+HSVSRLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKHSVSRLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY V+LFDE+EKAH VFN LLQVLDDGRLTDGQG TVDFRNTVII
Sbjct: 656 YEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGHTVDFRNTVII 715
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
MTSNLGAE+L++ + ++ RD V+ VR FRPE LNR+DEI++F L E + +
Sbjct: 716 MTSNLGAEYLVN-LGENDDVETVRDDVMGVVRASFRPEFLNRVDEIILFHRLRREDMGAI 774
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
+QM+ + L++R + L + D A + + + YDP YGARP++R ++K+V L+ ++
Sbjct: 775 VDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRVIQKEVQDPLAERIL 834
Query: 826 REEIDENSTVYIDASPKGDNLVYR 849
+I + S V I A D L +R
Sbjct: 835 LGDILDGSLVKITAG--SDRLNFR 856
>sp|P31543|CLP_TRYBB Heat shock protein 100 OS=Trypanosoma brucei brucei GN=HSP100 PE=3
SV=1
Length = 868
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/865 (53%), Positives = 604/865 (69%), Gaps = 28/865 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENAAQSA 62
+ T+ A++ A E A + P HLA+ L + G+ ++ + NAG +A
Sbjct: 7 QCTNAAQTALSDAVESARKHNNGFVDPAHLALVLFKNEDGLASRVLRKLNAGTVLEPLAA 66
Query: 63 ERVFNQAMKKLPSQTPAPDEIPASTTL-IKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ LP Q P P I S+ RRA+A + GD+ +AVD L++GL E
Sbjct: 67 R------VGALPEQRPRPRSITFSSDGGCAQHRRAEANRV--GDSLIAVDHLLIGLFECK 118
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
++ + K A + V+ + +LR +G+KV S + +QAL+ Y DL + A GKLD
Sbjct: 119 EVEAIMKAAHASKKAVEGALLELR--KGKKVTSEFQEENYQALEKYATDLCKLAEEGKLD 176
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGR +E+ R +R+LSRRTKNNP+LIGEPGVGKTA+ EG+AQRIVRGDVP L + RL
Sbjct: 177 PVIGRTDEVLRTIRVLSRRTKNNPILIGEPGVGKTAIAEGIAQRIVRGDVPDTLLNTRLF 236
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+GAL+AG+ RGEFEERLK+VL EV+E+ VILFIDEIHLVLGAG++ GSMDAANL
Sbjct: 237 SLDLGALIAGSSLRGEFEERLKSVLNEVKESSNGVILFIDEIHLVLGAGKSGGSMDAANL 296
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTLEEYR YVEKDAAFERRF VYV EPSV + +SILRGLK++YE
Sbjct: 297 LKPMLARGELRTIGATTLEEYRTYVEKDAAFERRFMPVYVTEPSVEECISILRGLKDRYE 356
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HHGV+I D A+VVAAQL+ RYIT R +PDKAIDL+DEACANVRVQL S+PE ID LERK
Sbjct: 357 AHHGVQITDNAVVVAAQLANRYITNRFMPDKAIDLIDEACANVRVQLSSRPEAIDILERK 416
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+ QLEIE ALE++K+ AS+ RL V+ ++ + ++LQPL+ +Y E++RIDE++ ++ +
Sbjct: 417 KRQLEIEAKALERDKEAASRERLKLVKADIQRVEEELQPLVSKYNDERQRIDELQEMQSR 476
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQL-EGNQSDENLMLTETVGPDQIA 538
+E L+ A R + AADL+Y I ++ I L E + + ++ E V +A
Sbjct: 477 LDEKK-KLERAVRDGKMDLAADLQYNVIPLIQDRIRSLKEDIERQKATLVQEKVTEGDVA 535
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
VV+RWTGIPV +L Q ++ERL+ L+ EAV VA++++R+RAGL RP P
Sbjct: 536 AVVARWTGIPVVKLSQTDRERLLNLSMHLHRRVKGQDEAVERVADAIIRARAGLSRPNSP 595
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
T SFLFLGPTGVGKTEL KA+A +LFDDE +VRIDMSEYMEQHSVSRLIGAPPGY+GH+
Sbjct: 596 TASFLFLGPTGVGKTELVKAVAAELFDDEKHMVRIDMSEYMEQHSVSRLIGAPPGYIGHD 655
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGGQLTE VRRRP++VVLFDEVEKAH +V+N LLQVLDDGRLTD +GRTVDF NT+I+MT
Sbjct: 656 EGGQLTEPVRRRPHAVVLFDEVEKAHPNVYNVLLQVLDDGRLTDSRGRTVDFSNTIIVMT 715
Query: 708 SNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVAR 767
SNLG+EHLL+ + +V R+ VL VR +FRPEL+NRLD+IVVF L E LR V
Sbjct: 716 SNLGSEHLLNPEETNESYEVLRENVLAAVRSYFRPELINRLDDIVVFRRLRTEDLRGVVD 775
Query: 768 LQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVRE 827
+ V RL G ++ + D D +L +D GARP+RRW+EK +VTE+ RML+ +
Sbjct: 776 NLIAGVNERLKSSGFSVLLDDGVKDFILEHGHDANMGARPLRRWIEKNIVTEIGRMLIAK 835
Query: 828 EIDENSTVYIDASPKGDNLVYRVQK 852
E+ NST+ + G+ L + V++
Sbjct: 836 ELPPNSTLRVSLPEGGNKLTFGVKR 860
>sp|Q898C7|CLPB_CLOTE Chaperone protein ClpB OS=Clostridium tetani (strain Massachusetts
/ E88) GN=clpB PE=3 SV=1
Length = 865
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/866 (49%), Positives = 618/866 (71%), Gaps = 24/866 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ +K T K + I + ++A H Q P HL AL+ G+ + N +
Sbjct: 1 MDIEKLTLKVQQTINDSQKIAVKYNHQQLEPFHLFAALVFQEDGLIPNILGKMNINIKVL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+R N+ M K+ + A+ + ++ RA++ K D++++V+ ++L L+
Sbjct: 61 RDEIKRELNE-MPKVLGDGAQNSGVYATRSFEEIFIRAESIAKDFKDSYISVEHIMLSLM 119
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAG 176
+ + I + + + + + ++++RG + +V++ + T++AL YGR+L+E A
Sbjct: 120 QGRSTSIKKILDKFNIRKDKFLNVLQQVRGNQ--RVDTQDPEGTYEALVKYGRNLIEDAK 177
Query: 177 K--LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
K LDPVIGRDEEIRR+VRILSRRTKNNPVLIG+PGVGKTA++EGLA+RIVRGDVP L
Sbjct: 178 KHKLDPVIGRDEEIRRIVRILSRRTKNNPVLIGDPGVGKTAIIEGLAERIVRGDVPEGLK 237
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
+ + +LDMGAL+AGAK+RGEFEERLKAVLKEVE ++GK+ILFIDEIH ++GAG+TEGSM
Sbjct: 238 NKIIFSLDMGALIAGAKFRGEFEERLKAVLKEVENSQGKIILFIDEIHNIVGAGKTEGSM 297
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+L CIGATT +EYRKY+EKD A ERRFQ V + EP+V DT+SI+RGL
Sbjct: 298 DAGNLIKPMLARGELNCIGATTFDEYRKYIEKDKALERRFQPVIIDEPTVEDTISIIRGL 357
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHG+RI D A+V AA+LS RYIT R+LPDKAIDL+DEA A +R ++DS P E+D
Sbjct: 358 KERFEIHHGIRIHDSAIVAAAKLSQRYITDRYLPDKAIDLIDEAGAMIRTEIDSLPTELD 417
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+++RK Q+EIE AL KEKD SK RL ++ KEL +L++K + + +Y+KEKE+I +R
Sbjct: 418 SIKRKIFQMEIEKEALAKEKDSRSKERLEDLEKELSNLKEKDKEMTAKYEKEKEQIINMR 477
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE--GNQSDENLMLTETV 532
LKQK +E+ L++AER YDL + A+L+YG I +++ I + E ++ + ML E V
Sbjct: 478 NLKQKLDEVKGQLEKAEREYDLNKVAELKYGIIPGIKSQIEEKEILIKENSQGNMLKEEV 537
Query: 533 GPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGL 581
++I++++S WTGIPVT+L + EK++L IG EAV AV+ +VLR+RAG+
Sbjct: 538 TENEISKIISHWTGIPVTKLIEGEKDKLLRLEDELKSRVIGQDEAVEAVSNAVLRARAGM 597
Query: 582 GRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP 641
PQ+P GSF+FLGPTGVGKTELAK L + LFD E ++RIDMSEYME++SVSRLIGAPP
Sbjct: 598 KDPQKPIGSFIFLGPTGVGKTELAKTLCKNLFDSEENIIRIDMSEYMEKYSVSRLIGAPP 657
Query: 642 GYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRN 701
GYVG+EEGGQLTEAVRR+PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF+N
Sbjct: 658 GYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKTVDFKN 717
Query: 702 TVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQ 761
+IIMTSN+G+ +LL + +++V ++ F+PE LNRLD+I++F PL++ +
Sbjct: 718 CIIIMTSNIGSSYLLENKKEDGIDETVKNKVSNALKDRFKPEFLNRLDDIIMFKPLTNRE 777
Query: 762 LRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELS 821
+ K+ + ++D+ RL +R + L VT+ A +++ E YD IYGARP++R++E + T+++
Sbjct: 778 ITKIIDIFLQDIENRLKDRNITLIVTENAKELMAKEGYDAIYGARPLKRYIENILETKIA 837
Query: 822 RMLVREEIDENSTVYIDASPKGDNLV 847
+ +++ +I E + +D KG+ ++
Sbjct: 838 KQIIKGDIYEGCKIGVDI--KGEEII 861
>sp|Q929G7|CLPB_LISIN Chaperone protein ClpB OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=clpB PE=3 SV=1
Length = 866
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/864 (51%), Positives = 622/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + +H+ LL++ FA+ + N +
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVIHVFKVLLTESD--FAKRAYDVAEVNV-E 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++V +++++K+P S + S L +++R A+ QK D ++ + LIL ++
Sbjct: 58 ALQKVVDESLRKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQKQLDDDFVSTEHLILAVM 117
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K+ + ++ + K+RG G+KV S + + ++AL YGRDLV +
Sbjct: 118 DQKSNPITVELKKQNKSKKQINEAILKIRG--GKKVTSQNAEENYEALTKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEMLQRELADYKEEANKMKSKWESEKSEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQ----SDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I VE + LE + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGKIPAVEKELLALETENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVQLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAYNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYVGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEITITISDNAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID K
Sbjct: 835 PLAREIVSGKIMPHSSVEIDLQDK 858
>sp|Q81GM5|CLPB_BACCR Chaperone protein ClpB OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=clpB PE=3 SV=1
Length = 866
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/874 (52%), Positives = 626/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KE D+ S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSVVL DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +RD V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>sp|Q7U637|CLPB1_SYNPX Chaperone protein ClpB 1 OS=Synechococcus sp. (strain WH8102)
GN=clpB1 PE=3 SV=2
Length = 862
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/860 (51%), Positives = 614/860 (71%), Gaps = 27/860 (3%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENA 58
M P ++FT + AI A +LA ++ H Q HL +ALL +G+ + ++ G +
Sbjct: 1 MQPTAEQFTEQAWAAIVAAQQLAQASRHQQLETEHLLLALLRQ-NGLAGRILSKTGVD-- 57
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ E +++LPS APD + +L K + RA+ + GD+ +A++ L+L L
Sbjct: 58 VTTFEASVEGHLQRLPSLGSAPDSVFLGRSLNKALDRAEQRRDGFGDSFIAIEHLLLALA 117
Query: 119 EDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
ED + G L +AGV +K + +RG + V + + T+++L YGRDL A
Sbjct: 118 EDDRCGRQLLSQAGVTTNTLKEAITAVRGNQ--TVTDQNPEATYESLAKYGRDLTAAARD 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
G+LDPVIGRDEEIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L +
Sbjct: 176 GQLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPQALQN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LI LDMGAL+AGAKYRGEFEERLKAVLKEV ++G+++LFIDEIH V+GAG + G+MD
Sbjct: 236 RQLITLDMGALIAGAKYRGEFEERLKAVLKEVTTSDGQIVLFIDEIHTVVGAGASGGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KPMLARG+LRCIGATTL+E+R+++EKD A ERRFQQV V +P+VPDT+SILRGLK
Sbjct: 296 ASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVPDTISILRGLK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV AA LS+RYIT R LPDKAIDLVDE+ A +++++ S+PE+ID
Sbjct: 356 ERYEVHHGVRIADSALVAAAMLSSRYITDRFLPDKAIDLVDESAARLKMEITSKPEQIDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +L +E D AS+ RL + +EL +L ++ L +++ EK ID++
Sbjct: 416 IDRKILQLEMEKLSLGRESDSASQERLQRIERELAELGEQQSSLNAQWQSEKGAIDQLSA 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN----LMLTET 531
LK++ E + +++A+R YDL +AA+L YG + ++ + + E DE+ +L E
Sbjct: 476 LKEEIERVQLQVEQAKRNYDLNKAAELEYGTLATLQRQLQEQEDLLEDEDGTDKTLLREE 535
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
V D IAEV+++WTGIPV RL Q+E E R+IG +AV AVA+++ RSRAG
Sbjct: 536 VTEDDIAEVIAKWTGIPVARLVQSEMEKLLQLEDDLHQRVIGQNQAVTAVADAIQRSRAG 595
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P SFLFLGPTGVGKTEL+KALA +LFD ++ +VRIDMSEYME+H+VSRLIGAP
Sbjct: 596 LSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDDAMVRIDMSEYMEKHTVSRLIGAP 655
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+E GGQLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTVDF
Sbjct: 656 PGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFT 715
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQE-VRKHFRPELLNRLDEIVVFDPLSH 759
NTV+I+TSN+G++ +L + G A +Q + E ++ FRPE LNRLD+ ++F L
Sbjct: 716 NTVLILTSNIGSQSILE-LAGDPEQHTAMEQRVNEALKAKFRPEFLNRLDDQIIFRSLEK 774
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E+LR++ LQ++ + RL +R + L ++D A D + +DP+YGARP++R +++++ T
Sbjct: 775 EELRRIVSLQVERLRSRLEQRKLDLQLSDIAADWLATIGFDPVYGARPLKRAIQRELETP 834
Query: 820 LSRMLVREEIDENSTVYIDA 839
+++ ++ ++ E TV +DA
Sbjct: 835 IAKAILAGQLSEGQTVQVDA 854
>sp|O87444|CLPB_PLEBO Chaperone protein ClpB OS=Plectonema boryanum GN=clpB PE=2 SV=2
Length = 873
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/859 (51%), Positives = 608/859 (70%), Gaps = 32/859 (3%)
Query: 2 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQS 61
N +KFT K EAI E+ A Q HL ALL + G+ N A
Sbjct: 5 NSEKFTEKVWEAIYRTQEMYKQAQQQQIETEHLMKALL-EQDGLAISIFNKL-----AVP 58
Query: 62 AERVFNQA---MKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+RV ++ +++ P + + + ++ RA+ +K D+ ++++ L+LG
Sbjct: 59 VDRVRDRTDDFIRRQPKVSGSGTSVYWGRRADALLXRAEEYRKQFEDSFISIEHLLLGYA 118
Query: 119 EDSQIGD-LFKEAGVA-VARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA- 175
+DS+ G L E A++++ +E++RG + KV + + +++L+ YGRDL + A
Sbjct: 119 QDSRFGKALLSEFRYPDEAKLRNAIEQVRGNQ--KVTDQTPENKYESLEKYGRDLTQYAR 176
Query: 176 -GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
GKLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRI+ GDVP +L
Sbjct: 177 EGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRILSGDVPQSLK 236
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +LIALDMGAL+AGAKYRGEFEERLKAVLKEV ++ G +ILFIDEIH V+GAG T+G+M
Sbjct: 237 DRKLIALDMGALIAGAKYRGEFEERLKAVLKEVTDSRGNIILFIDEIHTVVGAGATQGAM 296
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA NL KPMLARG+LRCIGATTL+EYRKY+EKDAA ERRFQQV+V +PSV DT+SILRGL
Sbjct: 297 DAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVFVDQPSVEDTISILRGL 356
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGV+I D ALV AA LS RYI+ R LP KAIDLVDEA A +++++ S+PEE+D
Sbjct: 357 KERYEVHHGVKISDSALVAAATLSTRYISDRFLPSKAIDLVDEAAAKLKMEITSKPEELD 416
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
++RK +QLE+E +L+KE D S+ RL + +EL D ++ L +++ EK I +++
Sbjct: 417 EVDRKVLQLEMERLSLQKENDAGSRDRLERLERELADFKEDQSKLNAQWQAEKSVITDLQ 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQE----VEAAIGQLEGNQSDENLMLTE 530
+LK++ + + +Q+AER YDL RAA+L+YG + E VE QL Q +L E
Sbjct: 477 KLKEEIDRVNLEIQQAERDYDLNRAAELKYGKLNELNRKVEETESQLSQIQKSGATLLRE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRA 579
V IAE++S+WTGIPV++L ++E +R+IG EAV AV++++ RSRA
Sbjct: 537 EVLESDIAEIISKWTGIPVSKLVESEMQKLLQLDDVLHQRVIGQDEAVTAVSDAIQRSRA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL P +PT SF+FLGPTGVGKTELAKALA LFD E +VRIDMSEYME+HSVSRLIGA
Sbjct: 597 GLSDPNRPTASFIFLGPTGVGKTELAKALAAFLFDTEEAMVRIDMSEYMEKHSVSRLIGA 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRRRPYSV+LFDE+EKAH VFN +LQ+LDDGR+TD QGRTVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSQGRTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSN+G++++ + +V++ + +FRPE LNR+DEI++F L
Sbjct: 717 KNTIIIMTSNIGSQYIFEYGGDDDRYEEILSRVMEAMLSNFRPEFLNRIDEIIIFHSLQK 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
QLR++ ++Q + RLA R ++L ++DAALD LAE +DP+YGARP++R +++++ T
Sbjct: 777 AQLREIVKIQTHRLESRLA-RKMSLKLSDAALDF-LAEGFDPVYGARPLKRAIQRELETT 834
Query: 820 LSRMLVREEIDENSTVYID 838
+++ ++R E T+++D
Sbjct: 835 IAKEILRSNFTEGDTIFVD 853
>sp|Q81TT4|CLPB_BACAN Chaperone protein ClpB OS=Bacillus anthracis GN=clpB PE=3 SV=1
Length = 866
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/874 (51%), Positives = 622/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q E + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGVENL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDISQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VKAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL RAA+LR+G I +E + + E N EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +T+AA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVKLTEAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIAGTITDNSHVVVDV--ENNELVVHVK 866
>sp|Q89UL2|CLPB_BRAJA Chaperone protein ClpB OS=Bradyrhizobium japonicum (strain USDA
110) GN=clpB PE=3 SV=1
Length = 879
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/864 (52%), Positives = 612/864 (70%), Gaps = 24/864 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K+T ++ I A LA GH QF+ LH+ LL D G+ A I+ AGG ++
Sbjct: 1 MNIEKYTERSRGFIQSAQSLAVREGHQQFSTLHVLKVLLDDNEGLAAGLIDRAGGN--SR 58
Query: 61 SAERVFNQAMKKLPSQTPA-PDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL- 118
+ + A+ K+P + +I + L + A+ A + GD+ + V++L+LGL
Sbjct: 59 AILKATEDALNKVPKVSGGGAGQIYLAPELARTFDAAEKAGEKAGDSFVTVERLLLGLTL 118
Query: 119 -EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+ S+ G + + GV + + +E LR +GR +SA+ + + ALK Y RDL + A
Sbjct: 119 EKTSEAGTILSKGGVTPQNLNAAIEALR--KGRTADSATAENAYDALKKYARDLTQAARD 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 GKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+L++LD+GAL+AGAKYRGEFEERLKAVL+EV +EG ILFIDE+H ++GAG+ +G+MD
Sbjct: 237 KKLLSLDLGALIAGAKYRGEFEERLKAVLQEVTGSEGTFILFIDEMHTLIGAGKGDGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KP LARG+L CIGATTL+EY+K+VEKDAA RRFQ ++V+EPSV DT+SILRGLK
Sbjct: 297 ASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPIFVSEPSVEDTISILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
+KYE HHGVRI D ALV +A LS RYIT R LPDKAIDL+DEA A +++Q+DS+PEE+D+
Sbjct: 357 DKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++R+ ++L+IE AL+KE D SK+RL + KEL +L +K L R+ EK ++ + ++
Sbjct: 417 MDREIIRLKIEQEALKKESDAGSKSRLQTLEKELVELEEKSASLTARWSAEKNKLSDAQK 476
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPD 535
LK + + L L A+RR + +A +L YG I E+E + +E + + M+ E V +
Sbjct: 477 LKAELDGLRVELANAQRRGEFQKAGELAYGRIPELERQLADIEAKE-NSGEMMEEAVTAN 535
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA+VVSRWTG+PV ++ + EK++L +G AEAV+AVA +V RSRAGL P
Sbjct: 536 HIAQVVSRWTGVPVDKMLEGEKDKLLKMEDSLGKRVVGQAEAVHAVATAVRRSRAGLQDP 595
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL KALAE LF+DE +VR+DMSEYME+HSVSRLIGAPPGYV
Sbjct: 596 NRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAPPGYV 655
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G++EGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+I
Sbjct: 656 GYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI 715
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E L++ G+ T V R+QV+ VR HFRPE LNR+DEI++F L ++ +
Sbjct: 716 IMTSNLGSEFLVNQPEGEDTSAV-REQVMGMVRGHFRPEFLNRVDEIILFHRLQRSEMGR 774
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q + L +R + L + AA D + A+ +DP YGARP++R +++ + L+ M+
Sbjct: 775 IVEIQFARLQKLLTDRKIVLTLDGAARDWLAAKGWDPAYGARPLKRVIQRYLQDPLAEMI 834
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ ++ + V I S +G+ L +
Sbjct: 835 LAGDVKDGDNVAI--SSEGNVLTF 856
>sp|Q8XKG8|CLPB_CLOPE Chaperone protein ClpB OS=Clostridium perfringens (strain 13 / Type
A) GN=clpB PE=3 SV=1
Length = 866
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/860 (50%), Positives = 607/860 (70%), Gaps = 25/860 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK T + +++ A+E+A + Q +HL AL++ G+ G
Sbjct: 1 MNADKMTLRVQQSLNDAYEIAVKYNNQQLDIIHLFSALVNQKDGLIPNIFEKMGVN--ID 58
Query: 61 SAERVFNQAMKKLPS---QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGL 117
S +R + + ++P + + A+ + +V+ +A+ K D++++V+ ++L +
Sbjct: 59 SLKRDIHVQIDRMPKVLGEAAQSSGVTATRRINEVLIKAEEISKQFEDSYISVEHVMLAM 118
Query: 118 LE---DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE- 173
++ + +G++ ++ + + ++RG + +V+S + T++AL YG +L+E
Sbjct: 119 IDIDKNGAVGEILRKNNITKDGFLKVLNEVRGSQ--RVDSQDPEGTYEALDKYGTNLIEL 176
Query: 174 -QAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
+ KLDPVIGRDEEIRR VRILSR+TKNNP+LIGEPGVGKTA+VEGLA+RIVRGDVP
Sbjct: 177 VKQHKLDPVIGRDEEIRRAVRILSRKTKNNPILIGEPGVGKTAIVEGLAERIVRGDVPEG 236
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D +I+LDMGAL+AGAKYRGEFEERLKAVLKEV+ +EGK++LFIDEIH ++GAG+T+G
Sbjct: 237 LKDKVIISLDMGALIAGAKYRGEFEERLKAVLKEVQSSEGKILLFIDEIHTIVGAGKTDG 296
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA NL KPMLARG+L CIGATT +EYR+Y+EKD A ERRFQ V V EP+V +TVSILR
Sbjct: 297 AMDAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPVIVEEPTVEETVSILR 356
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E HHG+RI D A+V AA+LS RYI R+LPDKAIDL+DEA A +R ++DS P E
Sbjct: 357 GLKERFEIHHGIRIHDSAIVAAAKLSHRYIQDRYLPDKAIDLIDEAGAMIRSEIDSLPTE 416
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + RK + LE E AL KE D ASK RLV + KEL +L+DK + ++Y+KEK I
Sbjct: 417 LDIIRRKILMLETEKEALSKENDDASKERLVALEKELAELQDKNDEMTIKYEKEKSHISA 476
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN--QSDENLMLTE 530
+R LK + +E ++ ER YDL + A+L+YG I E+E I + E + + +EN +L E
Sbjct: 477 VRDLKAELDEARGLAEKYEREYDLNKVAELKYGKIPELERKIKEQEASMEKDNENALLKE 536
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQN-----------EKERLIGLAEAVNAVAESVLRSRA 579
V ++I+E++S+WTGIPVT+L ++ +ER+IG EA AVA +V+R+RA
Sbjct: 537 EVTENEISEIISKWTGIPVTKLVESEREKLLRLEEELRERVIGQDEATTAVANAVIRARA 596
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
GL ++P GSF+FLGPTGVGKTELAK LA LFD E+ +VRIDMSEYME+H+VSRLIG
Sbjct: 597 GLKDERKPIGSFIFLGPTGVGKTELAKTLARNLFDSEDNIVRIDMSEYMEKHAVSRLIGP 656
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYSV+LFDE+EKAH VFN LQ+LDDGRLTD +G+TVDF
Sbjct: 657 PPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHDDVFNLFLQILDDGRLTDNKGKTVDF 716
Query: 700 RNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
+NT+IIMTSN+G+ +LL G+ R+ V+ E++ F+PE LNR+D+I++F PLS
Sbjct: 717 KNTIIIMTSNIGSGYLLENKSGEGIEDDIRENVMNEMKLRFKPEFLNRVDDIIMFRPLSS 776
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
E ++K+ + ++DV RL ER + L VTD A +I+ E YDP+YGARP++R++ + TE
Sbjct: 777 EGIKKIIDIFLRDVENRLRERNITLEVTDRAKEILAEEGYDPVYGARPLKRYISNVLETE 836
Query: 820 LSRMLVREEIDENSTVYIDA 839
+++ ++ EI + S ID
Sbjct: 837 IAKKIIAGEIYDGSVALIDG 856
>sp|Q73BY1|CLPB_BACC1 Chaperone protein ClpB OS=Bacillus cereus (strain ATCC 10987)
GN=clpB PE=3 SV=1
Length = 866
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/874 (51%), Positives = 623/874 (71%), Gaps = 31/874 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
M+ ++ T KT EAI A LA S H + +HL LL + G+ + N E
Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEAL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDE---IPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
Q AE + +KK PS T + E + + L +++ RA + D +++V+ ++L
Sbjct: 61 KQGAEGL----IKKKPSVTGSGAEAGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLL 116
Query: 116 GLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ 174
E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV +
Sbjct: 117 AFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAE 174
Query: 175 --AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSN 232
AGK+DPVIGRD EIRRV+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIV+ DVP
Sbjct: 175 VRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEG 234
Query: 233 LADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEG 292
L D + ALDM ALVAGAK+RGEFEERL+AVL E++++EG+++LFIDE+H ++GAG+TEG
Sbjct: 235 LKDRTIFALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG 294
Query: 293 SMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILR 352
+MDA N+ KPMLARG+L CIGATTL+EYRKY+EKD A ERRFQQV EP+V DT+SILR
Sbjct: 295 AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILR 354
Query: 353 GLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEE 412
GLKE++E +HGV I DRA+V A+ LS RYI+ R LPDKAIDLVDEACA +R ++DS P E
Sbjct: 355 GLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEACATIRTEIDSMPTE 414
Query: 413 IDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDE 472
+D + R+ MQLEIE AL KEKD S+ RL +++EL DL++ + +++KEKE I +
Sbjct: 415 LDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHK 474
Query: 473 IRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE---GNQSDENLMLT 529
+R L++ E L L+EAE YDL +AA+LR+G I +E + + E + EN +L
Sbjct: 475 VRDLREHLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLR 534
Query: 530 ETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSR 578
E V ++IA++VSRWTGIPV +L G+ EK ER+IG EAV+ V+++VLR+R
Sbjct: 535 EEVSEEEIADIVSRWTGIPVAKLVEGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRAR 594
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AG+ P +P GSF+FLGPTGVGKTELAK LA+ LFD E ++RIDMSEYME+H+VSRLIG
Sbjct: 595 AGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDMSEYMEKHAVSRLIG 654
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEAVRR+PYSV+L DE+EKAH VFN LLQ+LDDGR+TD QGRTVD
Sbjct: 655 APPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVD 714
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTM-QVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
F+NTVIIMTSN+G+ HLL G+ ++ + +R+ V+ ++R HFRPE LNR+DEI++F PL
Sbjct: 715 FKNTVIIMTSNIGSAHLLDGLEDDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPL 774
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ +++ + +K++ RLA+R + + +TDAA + V+ +DP+YGARP++R+++++V
Sbjct: 775 TTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVE 834
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
T+L+R L+ I +NS V +D + + LV V+
Sbjct: 835 TKLARELIASTITDNSHVVVDV--ENNELVVHVK 866
>sp|Q1RGR1|CLPB_RICBR Chaperone protein ClpB OS=Rickettsia bellii (strain RML369-C)
GN=clpB PE=3 SV=1
Length = 858
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/854 (50%), Positives = 606/854 (70%), Gaps = 22/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DKFT AI +A H Q PLHL +L ++ +GI INN+GG N
Sbjct: 1 MNIDKFTAHAKSAITNCQHIAAKNDHQQILPLHLLASLFNEDTGIIRTLINNSGG-NLNI 59
Query: 61 SAERVFNQAMKKLPS-QTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
A++V + K+P Q I +S L+KV++RA K +GD+ + +++++ L
Sbjct: 60 LADQV-QVELNKIPKVQVDGGGTIYSSAELLKVLQRADDLAKNNGDSFVTIERILEALSF 118
Query: 120 DSQI-GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
D+ I G + G++ ++ + + +LR +G+K ++ S + ++ ALK YGRD+ E ++G
Sbjct: 119 DNTIAGKILTNNGISSKKLAASILQLR--KGKKADTESAENSYDALKKYGRDVTELAESG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDP+IGRDEEIRR V++LSRR KNNPVLIGEPGVGKTA++EGLAQRI DVP L +
Sbjct: 177 KLDPIIGRDEEIRRTVQVLSRRMKNNPVLIGEPGVGKTAIIEGLAQRIFSKDVPETLINC 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
R+I LDMGAL+AGAKYRGEFEERLKAVL E++E+ G++ILFIDE+HL++G G+T+G+MDA
Sbjct: 237 RIIELDMGALIAGAKYRGEFEERLKAVLGEIKESSGEIILFIDELHLLVGTGKTDGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KPMLARG+L CIGATTL+EYRKY+EKDAAF RRFQ VYV+EP+V DT+SILRG+KE
Sbjct: 297 SNLLKPMLARGELHCIGATTLDEYRKYIEKDAAFARRFQPVYVSEPTVEDTISILRGIKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D A+V AA LS RYIT R LPDKAIDL+DEAC+ ++++L S+PEE+D L
Sbjct: 357 KYELHHAVRISDSAIVAAATLSNRYITDRFLPDKAIDLIDEACSRMKIELSSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +Q++IEL AL+KE D+ SK ++ + EL+ L + +++ EK +I ++L
Sbjct: 417 DRRIIQIKIELAALKKESDEHSKKKIEHLTAELEKLESNSYDMSSKWQAEKSKIQGQQKL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ + L+ AER +LA+A++L+YG I E+ I + E +D +L E V
Sbjct: 477 KEELDRARIDLERAERDANLAKASELKYGIIPEIMKKIQETE--NADSKGLLKEIVSESD 534
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
IA ++SR TGIP+ + +E+ERL IG EA+ +V+++V RSRAG+
Sbjct: 535 IASIISRITGIPIDTMLSSERERLLVMEQKLRESVIGQDEAIKSVSDAVRRSRAGIQDIN 594
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSFLFLGPTGVGKTEL KALA LFDD N ++RIDMSEYME+H++SRLIGAPPGYVG
Sbjct: 595 RPLGSFLFLGPTGVGKTELTKALAGFLFDDRNAILRIDMSEYMEKHAISRLIGAPPGYVG 654
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+++GG LTEAVRRRPY V+LFDEVEKAH +FN +LQ+LD+GRLTD QG TVDF+NT+I+
Sbjct: 655 YDQGGVLTEAVRRRPYQVILFDEVEKAHPDIFNIMLQILDEGRLTDSQGITVDFKNTIIV 714
Query: 706 MTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
+TSNLGAE L++ G+ T +V +DQV++ V+ F+PE LNRLDEI++F L+ + +
Sbjct: 715 LTSNLGAEILVNQKEGEDTYKV-KDQVMEYVKMVFKPEFLNRLDEIILFHRLNQSNIHDI 773
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
++Q++ + L+ + + L + AL+ + + YDP +GARP++R +++++ L++M++
Sbjct: 774 VKIQLEGLKKILSAQNIILEFDEPALNYLAEKGYDPSFGARPLKRLIQREIQNNLAKMIL 833
Query: 826 REEIDENSTVYIDA 839
E+ V I A
Sbjct: 834 AGEVSSGKIVKITA 847
>sp|Q9A9T4|CLPB_CAUCR Chaperone protein ClpB OS=Caulobacter crescentus (strain ATCC 19089
/ CB15) GN=clpB PE=3 SV=1
Length = 859
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/855 (52%), Positives = 599/855 (70%), Gaps = 29/855 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN D ++ + +A+ A LA + GH QF P H+ LL + G+ I +AGG
Sbjct: 1 MNIDLYSDRAKQAVQSAQSLALARGHQQFAPEHILKVLLEEKDGLSRALIQSAGGRPDQ- 59
Query: 61 SAERVFNQAMKKLPSQTPAPD----EIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILG 116
+ ++ L ++TP D ++ +V A+ + KA GD + ++L++
Sbjct: 60 -----LDGGVETLLAKTPRVDGAGGQLYMKPDTARVFAEAEKSAKAAGDAFVTTERLLIA 114
Query: 117 LL-EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
+ E + LFKEAGV+ +++ +R +GR +SA+ + ++ALK Y RDL A
Sbjct: 115 IAKEGGEAAKLFKEAGVSAQSLETAANAMR--KGRTADSANAEEGYEALKRYARDLTAAA 172
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GKLDPVIGRDEEIRR +++LSRRTKNNPVLIGEPGVGKTA+VEGLA RIV GDVP +L
Sbjct: 173 RDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESL 232
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
D +L++LDMG+L+AGAKYRGEFEERLKAVL EV AEG +ILFIDE+H ++GAG+ +G+
Sbjct: 233 KDKKLLSLDMGSLIAGAKYRGEFEERLKAVLGEVTAAEGSIILFIDEMHTLVGAGKGDGA 292
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
MDA+NL KP LARG+L C+GATTL+EYRK+VEKDAA RRFQ V+V+EP+V DTVSILRG
Sbjct: 293 MDASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRG 352
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LKEKYE HHGVRI D A+V AA LS RYI R LPDKAIDLVDEA + VR+Q+DS+PEE+
Sbjct: 353 LKEKYEVHHGVRISDSAIVAAATLSNRYIADRFLPDKAIDLVDEASSRVRMQIDSKPEEL 412
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D ++R+ +QL+IE AL KE D ASK RL + E+DDL+ + + R+K EKE++
Sbjct: 413 DEIDRRLVQLKIEREALSKETDAASKQRLENLEVEIDDLQFRSDEMTARWKAEKEKVGGA 472
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVG 533
+ ++ + L L A+R D ARA ++YG I +E + + E D + E V
Sbjct: 473 AQAREALDRLRADLANAQRAGDFARAGQIQYGEIPALERRLAEAEAG--DTQALTPEVVD 530
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLG 582
+QIA VVSRWTG+PV ++ + E+E+L +G EA+ AV+++V R+RAGL
Sbjct: 531 AEQIAAVVSRWTGVPVEKMLEGEREKLLKMEDELRGRVVGQDEALEAVSDAVRRARAGLQ 590
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +P GSFLFLGPTGVGKTEL K+LAE LF DE + R+DMSEYME+HSVSRLIGAPPG
Sbjct: 591 DPSKPIGSFLFLGPTGVGKTELTKSLAEFLFADEAAITRMDMSEYMEKHSVSRLIGAPPG 650
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG++EGG LTEA+RRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 651 YVGYDEGGALTEAIRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNT 710
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
+IIMTSNLGAE+L S G+ ++ R V+ VR HFRPE LNR+DEI++F LS +
Sbjct: 711 LIIMTSNLGAEYLASQEDGE-DVEAVRPMVMNTVRGHFRPEFLNRIDEIILFKRLSRHNM 769
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ R+Q++ V LA+R +ALA+ AL+ + + YDP+YGARP++R ++K++V +++
Sbjct: 770 GDIVRIQLQRVEKLLADRRMALALDAEALNWLADKGYDPVYGARPLKRVIQKELVDPIAK 829
Query: 823 MLVREEIDENSTVYI 837
L+ EI++ + +
Sbjct: 830 KLLAGEIEDGGVIAV 844
>sp|Q7WSY8|CLPB_PROFC Chaperone protein ClpB OS=Propionibacterium freudenreichii subsp.
shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1)
GN=clpB PE=2 SV=2
Length = 866
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/863 (52%), Positives = 599/863 (69%), Gaps = 24/863 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ +K T + +A+ A LA + G+ P+HL A+L P A + G + A
Sbjct: 1 MDTEKLTTMSRDAVTAAVRLALTKGNPTAEPVHLLHAMLMVPESSVAPLLKAVGAD--AA 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA-STTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+ + A+ KLPS + + P S L +V+ A+ GD ++ + L++ L E
Sbjct: 59 RVDGAASAAIDKLPSSSGSSVAQPQLSGALARVLADAETRADKLGDQFVSTEHLLIALAE 118
Query: 120 -DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
DS ++ GV A ++ RG +++ SA + AL Y DL ++A G
Sbjct: 119 VDSDAKNILASNGVTTAALEKAFNDSRGD--KRITSAESEGGESALDKYSIDLTQRAKDG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD EIRRV ++LSRRTKNNPVLIGE GVGKTAVVEGLAQRIV+GDVP +L
Sbjct: 177 KLDPVIGRDSEIRRVAQVLSRRTKNNPVLIGEAGVGKTAVVEGLAQRIVKGDVPDSLKGR 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
RL++LD+ ++VAGAKYRGEFEERLKAVL E++ AEG++I FIDE+H V+GAG +EGSMDA
Sbjct: 237 RLVSLDLASMVAGAKYRGEFEERLKAVLNEIKSAEGQIITFIDELHTVVGAGASEGSMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+N+ KP+LARG+LR IGATTL+EYR+++EKD A ERRFQQVYV EPSV DTV+ILRGL+E
Sbjct: 297 SNMLKPLLARGELRLIGATTLDEYREHIEKDPALERRFQQVYVGEPSVEDTVAILRGLRE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
+YE HH VRI D ALV AAQLS RYITGR LPDKAIDLVDEA + +R+++DS PEEID L
Sbjct: 357 RYEAHHKVRITDSALVAAAQLSHRYITGRQLPDKAIDLVDEAASRLRMEIDSSPEEIDTL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
R+ +L +E A+EKE+D SKARL + +L D +++L+ L R+ EKE ++++ L
Sbjct: 417 RRQVDRLTMEQFAVEKEEDPGSKARLARINSDLADAKEQLRGLEARWAAEKEGLNKVGEL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDEN--LMLTETVGP 534
K + + L + R DLA+A+++ YG I E+ + + + D M++E V
Sbjct: 477 KTRIDALRTEADKHTRDGDLAKASEILYGEIPELNKQLDEASAAEEDSQGKSMVSEEVTS 536
Query: 535 DQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D IAEVVS WTG+PV ++ G++EK +RL+G AV AV+++V RSRAG+
Sbjct: 537 DDIAEVVSAWTGVPVGKMLEGESEKLLDMENRIGKRLVGQQAAVKAVSDAVRRSRAGISD 596
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +PTGSF+FLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+HSVSRL+GAPPGY
Sbjct: 597 PNRPTGSFMFLGPTGVGKTELAKALADFLFDDETAMVRIDMSEYMEKHSVSRLVGAPPGY 656
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRRRPYSVVL DE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRN +
Sbjct: 657 VGYEEGGQLTEAVRRRPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNVI 716
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ + M + + R+QV+ V+ HFRPE LNRLDEIV+FD LS E L
Sbjct: 717 LIMTSNLGSQFMADPSM---SPEERRNQVMAVVKDHFRPEFLNRLDEIVLFDELSREDLD 773
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
K+ + + + RLAER +++ V+ AA + + YDP+YGARP+RR ++ V +L+R
Sbjct: 774 KIVDISLDKLNRRLAERRISIDVSAAAREWLARTGYDPVYGARPLRRLIQTTVEDQLARA 833
Query: 824 LVREEIDENSTVYIDASPKGDNL 846
++ I ++ V +D + GD +
Sbjct: 834 MLAGTISDDQKVSVDMNQAGDGV 856
>sp|Q7V8B1|CLPB_PROMM Chaperone protein ClpB OS=Prochlorococcus marinus (strain MIT 9313)
GN=clpB PE=3 SV=1
Length = 865
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/872 (50%), Positives = 615/872 (70%), Gaps = 30/872 (3%)
Query: 1 MNP--DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENA 58
M P D+FT K AI +A +LA H Q HL ++LL + + + + AG +
Sbjct: 1 MQPTADQFTEKGWAAIVLAQQLAQQRKHQQLETEHLLLSLLQQ-NALAGRILEKAG--VS 57
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ + +++ P+ APD + + ++ +A+ ++A GD+ ++++ L+L L
Sbjct: 58 IGNLQTAVEAHLQEQPTMQAAPDSVYLGKGVNDLLDQAEKHKQAFGDSFISIEHLLLALA 117
Query: 119 EDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D++ G L +AGV ++K ++ +RG + KV + + T+++L+ YGRDL A
Sbjct: 118 GDNRCGRKLLNQAGVDAGKLKVAIDAVRGNQ--KVTDQNPEGTYESLEKYGRDLSAAARE 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP+ L +
Sbjct: 176 GKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPAALQN 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
+LI LDMGAL+AGAKYRGEFEERLKAVLKEV +EG+++LFIDEIH V+GAG T G+MD
Sbjct: 236 RQLITLDMGALIAGAKYRGEFEERLKAVLKEVTASEGQIVLFIDEIHTVVGAGATGGAMD 295
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+NL KPMLARG+LRCIGATTL+E+R+++EKD A ERRFQQV V +P+V DT+SILRGLK
Sbjct: 296 ASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVQDTISILRGLK 355
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HHGVRI D ALV AA LS+RYI R LPDKAIDL+DE+ A +++++ S+PEEID
Sbjct: 356 ERYEVHHGVRIADNALVAAAVLSSRYIADRFLPDKAIDLMDESAARLKMEITSKPEEIDE 415
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
++RK +QLE+E +L +E D SK RL ++ +EL +L ++ L ++++EK ID++
Sbjct: 416 IDRKIVQLEMEKLSLGRESDSVSKERLEKLERELAELAEQQSALNAQWQQEKGAIDDLSS 475
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGA-------IQEVEAAIGQLEGNQSDENLML 528
LK++ E + +++A+R YDL +AA+L YG + E E A+ Q +G D++L L
Sbjct: 476 LKEEIERVQLQVEQAKRSYDLNKAAELEYGTLAGLQKQLSEKETALAQ-DGEAGDKSL-L 533
Query: 529 TETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGL-----------AEAVNAVAESVLRS 577
E V D IA+V+++WTGIPV +L Q+E E+L+GL +AV AVA+++ RS
Sbjct: 534 REEVTEDDIADVIAKWTGIPVAKLVQSEMEKLLGLEAELHQRVIGQEQAVQAVADAIQRS 593
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAGL P +P SFLFLGPTGVGKTEL+KALA QLFD E LVRIDMSEYME+HSVSRLI
Sbjct: 594 RAGLSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSEAALVRIDMSEYMEKHSVSRLI 653
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GAPPGYVG+E GGQLTEAVRRRPY+V+LFDEVEKAH VFN +LQ+LDDGR+TDGQGRTV
Sbjct: 654 GAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHQDVFNVMLQILDDGRVTDGQGRTV 713
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF NTV+I+TSN+G++ +L + +V + HFRPE LNRLDE ++F L
Sbjct: 714 DFTNTVLILTSNIGSQSILDLGGDDSQYREMERRVHDALHAHFRPEFLNRLDETIIFHSL 773
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
E+LR++ LQ+ + RL +R + L ++D A D + YDP+YGARP++R +++++
Sbjct: 774 RREELRQIVALQVNRLRERLCDRKLGLEISDTAADWLANAGYDPVYGARPLKRAIQRELE 833
Query: 818 TELSRMLVREEIDENSTVYIDASPKGDNLVYR 849
T +++ ++ ++ V++D + L +R
Sbjct: 834 TPIAKSILAGLYGDSQIVHVDVDVDQERLSFR 865
>sp|Q74FF1|CLPB_GEOSL Chaperone protein ClpB OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=clpB PE=3 SV=1
Length = 865
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/867 (52%), Positives = 604/867 (69%), Gaps = 27/867 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAA- 59
+ P+K T KT EA+A A +LA G+ P HL V+LL G+ A I GG AA
Sbjct: 2 IRPEKMTIKTQEALAGAQQLAARQGNGSIEPEHLLVSLLEQEGGLIAPIIQKVGGAPAAL 61
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
+SA V +K+LP + A + S L +++ AQ D ++ + L+LG
Sbjct: 62 RSAADVL---VKRLPQVSGATAQAYLSPALNRILDAAQREADTMKDEFVSTEHLLLGFFA 118
Query: 120 DSQIGDL--FKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
D Q +AGV+ V + + ++RG G +V + + T+QAL Y RDL + A
Sbjct: 119 DRQCAAARALLDAGVSRDNVLAALMEIRG--GERVTDQNPEDTYQALAKYARDLTDLARQ 176
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRD+EIRRV+++LSRRTKNNPVLIGEPGVGKTA+VEGLAQRIV GDVP L D
Sbjct: 177 GKLDPVIGRDDEIRRVLQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSGDVPETLKD 236
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
RL+ALDMGAL+AGAKYRGEFEERLKAV++EV ++EGKVILFIDE+H ++GAG EG+MD
Sbjct: 237 KRLVALDMGALIAGAKYRGEFEERLKAVIREVAKSEGKVILFIDELHTLVGAGAAEGAMD 296
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A+N+ KP LARG+L CIGATTL EYRKY+EKDAA ERRFQQVY EPSV DT++ILRGLK
Sbjct: 297 ASNMLKPALARGELHCIGATTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIAILRGLK 356
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
EKYE +HG+RI+D A++ AA LS RYIT R LPDKAIDL+DEA + +R+++DS P EID
Sbjct: 357 EKYENYHGIRIKDSAIIAAATLSDRYITDRFLPDKAIDLIDEAASRLRIEIDSMPTEIDE 416
Query: 416 LERKRMQLEIELHALEKE-KDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ER+ +QLEIE AL +E +D S RL ++ EL++L+ K L +++EK+ I +
Sbjct: 417 VERRIIQLEIEKQALLRESQDPHSLERLKKLADELEELKAKSAELKGHWQREKDIIGRVS 476
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD---ENLMLTET 531
L+Q+ EE ++AER +LAR A++RYG I +E I D E ML E
Sbjct: 477 SLRQRLEEKREEAKKAEREGNLARTAEIRYGEIPAIEKEIADRSAELEDIRKEGKMLPEE 536
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAG 580
V + +AE+VSRWTGIPV+R+ + E + R++G EA+ VA ++ R+R+G
Sbjct: 537 VDGELVAEIVSRWTGIPVSRMMEGEADKLVHMEDRLITRVVGQDEALVLVANAIRRARSG 596
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P GSFLFLGPTGVGKTE AKALAE LF+D+ +VRIDMSEY E+H+V+RLIGAP
Sbjct: 597 LSDPNRPIGSFLFLGPTGVGKTETAKALAEFLFNDDQAIVRIDMSEYQEKHTVARLIGAP 656
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+EEGGQLTEAVRRRPYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFR
Sbjct: 657 PGYVGYEEGGQLTEAVRRRPYSIVLFDEIEKAHPEVFNVLLQVLDDGRLTDGQGRTVDFR 716
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NTVIIMTSNLG++ + G + V + +++ F+PE LNR+DEIV++ L E
Sbjct: 717 NTVIIMTSNLGSQWI--QQYGSSDYARMKAMVTETLKEGFKPEFLNRIDEIVIYHALPLE 774
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
Q++K+ +Q++ + RLA+R + L ++D A + + E YDP YGARP++R +++K+ L
Sbjct: 775 QIKKIVDIQVECLKQRLADRRIVLELSDKAREYLSREGYDPAYGARPLKRTIQRKIQDPL 834
Query: 821 SRMLVREEIDENSTVYIDASPKGDNLV 847
+ L+ + E TV +D S G+ LV
Sbjct: 835 ALALLEGKFQEGDTVRVDLSVSGEELV 861
>sp|Q88VX7|CLPB_LACPL Chaperone protein ClpB OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=clpB PE=3 SV=1
Length = 867
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/880 (51%), Positives = 616/880 (70%), Gaps = 47/880 (5%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MNP++FT +A+ A ++A + H + HL L+ P + Q + AG +
Sbjct: 1 MNPEQFTESLQQALQQAQQIAQTRRHQEIGVPHL-FKFLTQPGELVRQIFSEAGAD---- 55
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPA------------STTLIKVIRRAQAAQKAHGDTHL 108
+Q +L + D+I S++L +++ A A +KA GD +L
Sbjct: 56 -----LDQLQTELDREL---DDIAVVSGGNVQYGGSMSSSLATLMQAADAKRKALGDDYL 107
Query: 109 AVDQLILGLLEDS--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKT 166
A D L L L++ + Q+ + G+ +VK+ V+++RG G++V S + + +QAL+
Sbjct: 108 ATDTLALALMDQTGDQLTKYLNQQGITAGQVKNAVDRIRG--GQRVTSRNQEDQYQALEK 165
Query: 167 YGRDLVEQA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRI 224
YG DLV+QA G DPVIGRDEEI V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRI
Sbjct: 166 YGVDLVKQARQGNQDPVIGRDEEILDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRI 225
Query: 225 VRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLV 284
VRGDVP NL D L +LDMG+L+AGAKYRGEFEERLKAVLKE+++++G++I+FIDEIH +
Sbjct: 226 VRGDVPENLKDKTLFSLDMGSLIAGAKYRGEFEERLKAVLKEIKKSDGQIIMFIDEIHNI 285
Query: 285 LGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSV 344
+GAG+TEGSMDA NL KPMLARG+L IGATTL+EYR+Y+EKD A ERRFQ+V VAEPSV
Sbjct: 286 VGAGKTEGSMDAGNLLKPMLARGELHLIGATTLDEYRQYMEKDKALERRFQKVLVAEPSV 345
Query: 345 PDTVSILRGLKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRV 404
DT+SILRGLKE++E HHGVRI D ALV AA+LS RYIT R+LPDKA+DLVDEA A +RV
Sbjct: 346 EDTISILRGLKERFEIHHGVRIHDNALVAAAKLSDRYITDRYLPDKALDLVDEASAEIRV 405
Query: 405 QLDSQPEEIDNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYK 464
+++S P E+D + R+ M+LE+E AL+KE D AS RL +V+KEL ++K + L R+
Sbjct: 406 EMNSNPTELDQVNRQLMRLEVEEAALKKETDDASVKRLADVQKELASAKEKQRTLSERWD 465
Query: 465 KEKERIDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDE 524
EK+ + + K ++ L+ AE YDL +AA L++G I ++E + +E N E
Sbjct: 466 SEKKSLQALSDKKSALDKAKHDLENAENNYDLEQAAKLQHGTIPKLEQELKAMEANDHHE 525
Query: 525 NLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLAE-----------AVNAVAES 573
+ ++ E+V PDQIA VVSR TGIPV +L E+E+L+ LA+ AV+AV+++
Sbjct: 526 DWLVEESVTPDQIANVVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDA 585
Query: 574 VLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSV 633
VLRSRAGL P +P GSF+FLGPTGVGKTELAKALAE LFD ++ +VRIDMSEYME+ SV
Sbjct: 586 VLRSRAGLQDPNRPLGSFMFLGPTGVGKTELAKALAENLFDADDHMVRIDMSEYMEKESV 645
Query: 634 SRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQ 693
SRL+GA PGYVG+EEGGQLTEAVRR PYS+VLFDE+EKAH VFN LLQVLDDGRLTDGQ
Sbjct: 646 SRLVGAAPGYVGYEEGGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTDGQ 705
Query: 694 GRTVDFRNTVIIMTSNLGAEHLLSGM--MGKVTMQVARDQVLQEVRKHFRPELLNRLDEI 751
GRTVDF+NT++IMTSNLG+E LL+G+ G ++ + QV+Q V+ F+PE LNR+D+I
Sbjct: 706 GRTVDFKNTILIMTSNLGSELLLAGVDDQGHLSADTHQ-QVMQLVQSRFKPEFLNRIDDI 764
Query: 752 VVFDPLSHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRW 811
++F PL + ++ + ++ RL +R + L ++D A + + Y+P YGARP+RR+
Sbjct: 765 IMFTPLQLGAIEEIVVKLIDRLSARLQDREITLKISDEAKKWIAKQGYEPAYGARPLRRF 824
Query: 812 LEKKVVTELSRMLVREEIDENSTVYIDASPKGDNLVYRVQ 851
+ V T L++ ++ + STV I+ D+LV+ Q
Sbjct: 825 ITNHVETPLAKEIIAGRVAPKSTVAINLM--DDHLVFENQ 862
>sp|Q71XF9|CLPB_LISMF Chaperone protein ClpB OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=clpB PE=3 SV=1
Length = 866
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/864 (50%), Positives = 616/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + H+ LL++ FA+ + + E
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESD--FAKRVYDVA-EVDID 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++ A+ K+P S + S L +++R A+ QK D ++ + LIL ++
Sbjct: 58 ALQKTVEDALTKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQKQLDDDFVSTEHLILAVM 117
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K+ + +++ + K+RG G+KV S + + ++AL YGRDLV +
Sbjct: 118 DQKSNPITMNLKKQHKSKKQIQEAILKIRG--GKKVTSQNAEENYEALTKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEILQRELADYKEEANQMKSKWESEKNEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I V + + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGKIPAVEKELLELEAENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADELHQKVIGQDDAVQLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGYVG+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYVGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEITITISDNAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID + K
Sbjct: 835 PLAREIVSGKIMPHSSVEIDLADK 858
>sp|Q75GT3|CLPB2_ORYSJ Chaperone protein ClpB2, chloroplastic OS=Oryza sativa subsp.
japonica GN=CLPB2 PE=2 SV=1
Length = 978
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/860 (50%), Positives = 603/860 (70%), Gaps = 32/860 (3%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
+FT ++I + E+A + H HL +LL +G+ + + AG +N R
Sbjct: 88 EFTEMAWQSIVSSPEVAKESKHQIVETEHLMKSLLEQRNGLARRIFSKAGVDNT-----R 142
Query: 65 VFNQAMKKLPSQTPAPDEIPAST---TLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
+ + K + Q E P S L +I+RA+ +K +GD+ ++V+ L+LG ED
Sbjct: 143 LLDATEKFIQRQPKVLGEDPGSMLGRDLEALIQRARDFKKEYGDSFVSVEHLVLGFAEDK 202
Query: 122 QIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+ G LFK+ + V +K+ +E +RGK+ + G ++AL YG+DL A GKL
Sbjct: 203 RFGRQLFKDFQITVQSLKTAIESIRGKQNVIDQDPEG--KYEALDKYGKDLTAMARQGKL 260
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRD+EIRR ++ILSRRTKNNPVLIGEPGVGKTA+ EGLAQRIV+GDVP L + RL
Sbjct: 261 DPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPQALTNRRL 320
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
IALDMGAL+AGAKYRGEFE+RLKAVLKEV +++G+ ILFIDEIH V+GAG T G+MDA N
Sbjct: 321 IALDMGALIAGAKYRGEFEDRLKAVLKEVTDSDGQTILFIDEIHTVVGAGATNGAMDAGN 380
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPML RG+LRCIGATTL+EYRKY+EKD A ERRFQQVYV +PSV DT+SILRGL+E+Y
Sbjct: 381 LLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTISILRGLRERY 440
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGVRI D ALV AA LS RYI+GR LPDKAIDLVDE+ A +++++ S+P +D ++R
Sbjct: 441 ELHHGVRISDSALVAAALLSDRYISGRFLPDKAIDLVDESAAKLKMEITSKPTALDEIDR 500
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
++LE+E +L + DKAS+ RL + EL L++K + L ++++EK + +I+ +K+
Sbjct: 501 AVIKLEMERLSLTNDTDKASRDRLSRIEAELSLLKEKQKDLTEQWEREKSVMTKIQSIKE 560
Query: 479 KREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTETVGP 534
+ + + +Q+AER YDL RAA+L+YG++ ++++ +L+ QS ML E V
Sbjct: 561 EIDRVNVEIQQAEREYDLNRAAELKYGSLNALQRQLQTTEKELDEYQSSGKSMLREEVTQ 620
Query: 535 DQIAEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGR 583
D IAE+VSRWTGIPV++L Q+++ +R++G AV AV+E++ RSRAGL
Sbjct: 621 DDIAEIVSRWTGIPVSKLKQSDREKLLYLEEELHKRVVGQDPAVKAVSEAIQRSRAGLSD 680
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P SF+F+GPTGVGKTELAKALA +F+ E +VRIDMSEYME+HSVSRLIGAPPGY
Sbjct: 681 PNRPIASFMFMGPTGVGKTELAKALAAFMFNTEEAVVRIDMSEYMEKHSVSRLIGAPPGY 740
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGGQLTEAVRRRPYS++LFDE+EKAH VFN LQ+LDDGR+TD QGR V F N++
Sbjct: 741 VGYEEGGQLTEAVRRRPYSIILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRKVSFTNSI 800
Query: 704 IIMTSNLGAEHLLS----GMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSH 759
IIMTSN+G++ +L+ G + + +V+ R FRPE +NR+DE +VF PL
Sbjct: 801 IIMTSNVGSQFILNMDEEGGSTDSAYENIKKRVMDAARSVFRPEFMNRIDEYIVFKPLER 860
Query: 760 EQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTE 819
EQ+ + +LQ+ V R+A+R + L V+ A++ + + YDP YGARP++R +++ V E
Sbjct: 861 EQINSIVKLQLARVQKRIADRKIKLEVSPGAVEFLGSLGYDPNYGARPVKRVIQQYVENE 920
Query: 820 LSRMLVREEIDENSTVYIDA 839
L++ ++R + + ++ +D
Sbjct: 921 LAKGILRGDFKDEDSILVDT 940
>sp|Q8Y570|CLPB_LISMO Chaperone protein ClpB OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=clpB PE=1 SV=1
Length = 866
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/864 (50%), Positives = 616/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + H+ LL++ FA+ + + E
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESD--FAKRVYDVA-EVDTD 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++V ++K+P S + S L +++R A+ Q+ D ++ + LIL ++
Sbjct: 58 ALQKVIENTLEKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQQQLEDDFVSTEHLILAVM 117
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K A ++K + K+RG G++V S + + ++AL YGRDLV +
Sbjct: 118 DQKSNPITAELKNQHKAKKQIKEAILKIRG--GKRVTSQNAEENYEALTKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEILQRELADYKEEANQMKSKWESEKNEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I V + + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGRIPAVEKELLELEAENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVQLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGY+G+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYIGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEITITISDDAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID + K
Sbjct: 835 PLAREIVSGKIMPHSSVEIDLADK 858
>sp|G2K265|CLPB_LISM4 Chaperone protein ClpB OS=Listeria monocytogenes serotype 1/2a
(strain 10403S) GN=clpB PE=2 SV=1
Length = 866
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/864 (50%), Positives = 616/864 (71%), Gaps = 28/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M+ KFT + + IA A LA ++ H + H+ LL++ FA+ + + E
Sbjct: 1 MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESD--FAKRVYDVA-EVDTD 57
Query: 61 SAERVFNQAMKKLP--SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
+ ++V ++K+P S + S L +++R A+ Q+ D ++ + LIL ++
Sbjct: 58 ALQKVIENTLEKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQQQLEDDFVSTEHLILAVM 117
Query: 119 E--DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ-- 174
+ + I K A ++K + K+RG G++V S + + ++AL YGRDLV +
Sbjct: 118 DQKSNPITAELKNQHKAKKQIKEAILKIRG--GKRVTSQNAEENYEALTKYGRDLVAEVR 175
Query: 175 AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLA 234
+GKLDPVIGRD EIR V+RILSR+TKNNPVLIGEPGVGKTA+VEGLAQRIVR DVP L
Sbjct: 176 SGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLK 235
Query: 235 DVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSM 294
D +I+LD+G+L+AGAKYRGEFEERLKAVL+EV++++G+++LFIDEIH ++GAG+T+G+M
Sbjct: 236 DKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KPMLARG+L CIGATTL+EYR+Y+EKDAA ERRFQ+V V EP+V DTVSILRGL
Sbjct: 296 DAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE++E HHGV I D ALV AA LS RYIT R LPDKAIDLVDEACA +RV++DS P E+D
Sbjct: 356 KERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELD 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
+ RK MQLEIE AL++EKD AS+ RL +++EL D +++ + +++ EK I +IR
Sbjct: 416 EVTRKVMQLEIEEAALKEEKDPASERRLEILQRELADYKEEANQMKSKWESEKNEISKIR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEV----EAAIGQLEGNQSDENLMLTE 530
++++ + L L+EAE YDL +AA+LR+G I V + + E+ +L E
Sbjct: 476 EVREQIDHLRHELEEAENNYDLNKAAELRHGRIPAVEKELLELEAENREKTAQEDRILQE 535
Query: 531 TVGPDQIAEVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRA 579
V ++IAE+V RWTGIPVT+L + E+E+L+ LA +AV V+++VLR+RA
Sbjct: 536 EVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVQLVSDAVLRARA 595
Query: 580 GLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGA 639
G+ P++P GSF+FLGPTGVGKTELAKALA +FD E+ ++RIDMSEYME+HSVSRL+GA
Sbjct: 596 GIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGA 655
Query: 640 PPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDF 699
PPGY+G+EEGGQLTEAVRR PYS+VL DE+EKAH VFN LLQVLDDGR+TD QGR +DF
Sbjct: 656 PPGYIGYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDF 715
Query: 700 RNTVIIMTSNLGAEHLLSGM-MGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
+NTVIIMTSN+G+ LL G+++ ++ D V+Q ++ F+PE LNR+D+I++F PL+
Sbjct: 716 KNTVIIMTSNIGSNLLLERTEEGEISPELESD-VMQILQSEFKPEFLNRVDDIILFKPLT 774
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++ + ++++ IRLA++ + + ++D A + E+YDP+YGARP++R++ + V T
Sbjct: 775 LADIKGIVEKLVEELQIRLADQEITITISDDAKAFIAEEAYDPVYGARPLKRYIVRHVET 834
Query: 819 ELSRMLVREEIDENSTVYIDASPK 842
L+R +V +I +S+V ID + K
Sbjct: 835 PLAREIVSGKIMPHSSVEIDLADK 858
>sp|Q7CU92|CLPB_AGRT5 Chaperone protein ClpB OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=clpB PE=3 SV=2
Length = 874
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/877 (50%), Positives = 595/877 (67%), Gaps = 23/877 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN DK++ + + A A + H QF+P H+ LL D G+ A I AGG+ A+
Sbjct: 1 MNIDKYSERVRGFLQSAQTFALAENHQQFSPEHVLKVLLDDEQGMAASLIERAGGD--AK 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
A + A+ KLP + + + L KV A+ K GD+ + V++L+ L +
Sbjct: 59 EARLANDAALAKLPKVSGGNGGLSLTAPLAKVFSTAEDLAKKAGDSFVTVERLLQALAIE 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--G 176
+ K+AG + + +R +GR +SA+ + F ALK Y RDL E+A G
Sbjct: 119 SSASTSASLKKAGATAQALNQVINDIR--KGRTADSANAEQGFDALKKYARDLTEEAREG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
+LDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 RLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV+ G +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 KLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGGIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V V EP+V DT+SILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVLVDEPNVEDTISILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYIT R LPDKAIDL+DEA + +R+Q+DS+PEE+D L
Sbjct: 357 KYEQHHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDEL 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ +QL+IE AL++E D++S RL ++ EL D +K L R++ EK+++ L
Sbjct: 417 DRRIIQLKIEREALKQETDQSSVDRLRKLEDELADTEEKADALTARWQAEKQKLGHAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEG-NQSDENLMLTETVGPD 535
K++ +E L A+R RA +L YG I +E + E + S M+ E V PD
Sbjct: 477 KKRLDEARNELAIAQRNGQFQRAGELTYGIIPGLEKELAAAEARDSSGAGSMVQEVVTPD 536
Query: 536 QIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRP 584
IA VVSRWTGIPV ++ + ++E+L +G EAV AV+++V RSRAGL P
Sbjct: 537 NIAHVVSRWTGIPVDKMLEGQREKLLRMEDELAKSVVGQGEAVQAVSKAVRRSRAGLQDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P GSF+FLGPTGVGKTEL K+LA LFDDE +VR+DMSEYME+HSV+RLIGAPPGYV
Sbjct: 597 NRPIGSFIFLGPTGVGKTELTKSLARFLFDDETAMVRLDMSEYMEKHSVARLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDF+NT+I
Sbjct: 657 GYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTII 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSNLG+E ++ M + R+ V++ VR HFRPE LNR+D+I++F L +++
Sbjct: 717 IMTSNLGSE-FMTQMGDNDDVDSVRELVMERVRSHFRPEFLNRIDDIILFHRLRRDEMGA 775
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q+K + LA+R + L + + A + + YDP YGARP++R ++K V L+ M+
Sbjct: 776 IVEIQLKRLVSLLADRKITLELDEDARSWLANKGYDPAYGARPLKRVIQKSVQDRLAEMI 835
Query: 825 VREEIDENSTVYIDASPKGDNLVYRVQKNGGFVDAAT 861
+ EI + S V + + D L+++V+ G + T
Sbjct: 836 LGGEIPDGSRVKVTSGT--DRLLFKVKPAKGEAETET 870
>sp|Q72IK9|CLPB_THET2 Chaperone protein ClpB OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=clpB PE=3 SV=1
Length = 854
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/864 (52%), Positives = 609/864 (70%), Gaps = 30/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +++T EA+A A LA H HL LL D G+ + + AG + A
Sbjct: 1 MNLERWTQAAREALAQAQVLAQRMKHQAIDLPHLWAVLLKDEGGLAWRLLEKAGADPKA- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ + + + +LP A ++ L + RA+A + D ++AVD L+L L E
Sbjct: 60 -LKELQERELSRLPKVEGAEVGQYLTSRLSGALNRAEALMEELKDRYVAVDTLVLALAEA 118
Query: 121 SQIGDLFKEAGV-AVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ G+ + +K +++LRG GR V++ ++T+ AL+ YG DL A GK
Sbjct: 119 T--------PGLPGLEALKGALKELRG--GRTVQTEHAESTYNALEQYGIDLTRLAAEGK 168
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRV++IL RRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L R
Sbjct: 169 LDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKR 228
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+++L MG+L+AGAKYRGEFEERLKAV++EV +++G+VILFIDE+H V+GAG+ EG++DA
Sbjct: 229 IVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAG 288
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+LR IGATTL+EYR+ +EKD A ERRFQ VYV EP+V +T+SILRGLKEK
Sbjct: 289 NMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTVEETISILRGLKEK 347
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D A++ AA LS RYIT R LPDKAIDL+DEA A +R+ L+S PEEID LE
Sbjct: 348 YEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALE 407
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK++QLEIE AL+KEKD S+ RL + E+ L +++ L +++E+E + ++R +
Sbjct: 408 RKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQ 467
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ +E+ ++ AER+YDL RAA+LRYG + ++EA + L + E D I
Sbjct: 468 HRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEED-I 526
Query: 538 AEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
AE+VSRWTGIPV++L + E+ +R++G EA+ AVA+++ R+RAGL P +
Sbjct: 527 AEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNR 586
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTELAK LA LFD E ++RIDM+EYME+H+VSRLIGAPPGYVG+
Sbjct: 587 PIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGY 646
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTD GRTVDFRNTVII+
Sbjct: 647 EEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIIL 706
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG+ +L G+ + RD+V + +++HFRPE LNRLDEIVVF PL+ EQ+R++
Sbjct: 707 TSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIV 766
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q+ + RLAE+ ++L +T+AA D + YDP++GARP+RR +++++ T L++ ++
Sbjct: 767 EIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILA 826
Query: 827 EEIDENSTVYIDASPKGDNLVYRV 850
E+ E V +D P G LV+ V
Sbjct: 827 GEVKEGDRVQVDVGPAG--LVFAV 848
>sp|Q8FM94|CLPB_COREF Chaperone protein ClpB OS=Corynebacterium efficiens (strain DSM
44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
GN=clpB PE=3 SV=1
Length = 852
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/864 (53%), Positives = 592/864 (68%), Gaps = 39/864 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG--GENA 58
NP T KT+EA+ A + A++ G+ P HL VA+L G+ A + AG +
Sbjct: 4 FNP---TTKTSEAMQAALQQASANGNPDIRPAHLLVAILDQADGVAAPVLTAAGVDPKTI 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
A+++ + K S P+ + + + +Q GD +++ + L+ G+
Sbjct: 61 LAEAQKLVDGYPKASGSNLANPN---FNRDALNALTASQELAGELGDEYVSTEVLLAGIA 117
Query: 119 E-DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
S DL K G +K+ + +RG + KV S + FQAL+ Y DL + A
Sbjct: 118 RGKSDAADLLKGKGATYDAIKAAFQSVRGSQ--KVTSQDPEGQFQALEKYSTDLTKLARE 175
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GK+DPVIGRD+EIRRVV++LSRRTKNNPVLIGEPGVGKTA+VEGLA+RIV GDVP +L
Sbjct: 176 GKIDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKG 235
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSM 294
LI+LD+G++VAGAKYRGEFEERLKAVL E++ A G+++ FIDE+H ++GAG + E +M
Sbjct: 236 KTLISLDLGSMVAGAKYRGEFEERLKAVLDEIKGANGEIVTFIDELHTIVGAGASGESAM 295
Query: 295 DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGL 354
DA N+ KP+LARG+LR +GATTL EYRKY+EKD A ERRFQQVYV EPSV DTV ILRGL
Sbjct: 296 DAGNMIKPLLARGELRLVGATTLNEYRKYIEKDTALERRFQQVYVGEPSVEDTVGILRGL 355
Query: 355 KEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEID 414
KE+YE HHGVRIQD ALV AA+LS RYIT R LPDKAIDLVDEA + +R+++DS P+EID
Sbjct: 356 KERYEVHHGVRIQDSALVAAAELSHRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEID 415
Query: 415 NLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIR 474
LER +LEIE AL KE D AS+ RL +R EL D R+KL L R++ EK ID++R
Sbjct: 416 ELERIVRRLEIEEVALTKETDVASRERLERLRSELADEREKLSELKARWQNEKAVIDDVR 475
Query: 475 RLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGN-QSDENLMLTETVG 533
+ K++ E L AER D R A+LRYG I E+E I + E +N MLTE V
Sbjct: 476 KFKEELEALRSESDIAEREGDYGRVAELRYGRIPELEKKIAEAEEKIGGADNSMLTEEVT 535
Query: 534 PDQIAEVVSRWTGIPVTRLGQNEKE-----------RLIGLAEAVNAVAESVLRSRAGLG 582
P+ IAEVVS WTGIP ++ Q E E R++G EAV AV+++V RSRAG+
Sbjct: 536 PEVIAEVVSAWTGIPAGKMMQGETEKLLNMERFLGKRVVGQHEAVTAVSDAVRRSRAGVA 595
Query: 583 RPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPG 642
P +PTGSFLFLGPTGVGKTELAKA++E LFDDE +VRIDMSEY E+HSV+RL+GAPPG
Sbjct: 596 DPNRPTGSFLFLGPTGVGKTELAKAVSEFLFDDERAMVRIDMSEYSEKHSVARLVGAPPG 655
Query: 643 YVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNT 702
YVG+++GGQLTEAVRRRPY+ VLFDEVEKAH VF+ LLQVLDDGRLTDGQGRTVDFRNT
Sbjct: 656 YVGYDQGGQLTEAVRRRPYTTVLFDEVEKAHPDVFDILLQVLDDGRLTDGQGRTVDFRNT 715
Query: 703 VIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQL 762
++I+TSNLGA R+Q++ V+ F+PE +NRLD+IVVFDPLS EQL
Sbjct: 716 ILILTSNLGAGG-------------TREQMMDAVKMAFKPEFINRLDDIVVFDPLSQEQL 762
Query: 763 RKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSR 822
+ +Q+ +A RL++R + L V+DAA + YDP YGARP+RR +++ + +L++
Sbjct: 763 ASIVEIQISQLAERLSDRRLTLRVSDAAKLWLAERGYDPAYGARPLRRLIQQAIGDQLAK 822
Query: 823 MLVREEIDENSTVYIDASPKGDNL 846
L+ EI + V +D + G L
Sbjct: 823 ELLAGEIRDGDRVLVDVADGGQYL 846
>sp|Q7CQ01|CLPB_SALTY Chaperone protein ClpB OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=clpB PE=3 SV=1
Length = 857
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/854 (51%), Positives = 593/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S+ L++V+ + GD ++ + +L LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV+R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ VL V ++FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ + ++A+
Sbjct: 836 GELVPGKVIRLEAN 849
>sp|Q7AMH5|CLPB_SALTI Chaperone protein ClpB OS=Salmonella typhi GN=clpB PE=3 SV=1
Length = 857
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/854 (51%), Positives = 593/854 (69%), Gaps = 19/854 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+QA+ +LP ++ S+ L++V+ + GD ++ + +L LE
Sbjct: 60 -LRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ DL K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLTDLLKSAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTVDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +ELDD + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ E+ A+++A R DLAR ++L+YG I E+E + ++ +L V +I
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEI 536
Query: 538 AEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQ 586
AEV++RWTGIPV+R+ + E+E+L IG EAV AV+ ++ RSRAGL P +
Sbjct: 537 AEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNR 596
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTEL KALA +FD ++ +VRIDMSE+ME+HSVSRL+GAPPGYVG+
Sbjct: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IM
Sbjct: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG++ L+ G++ ++ VL V ++FRPE +NR+DE+VVF PL + + +A
Sbjct: 717 TSNLGSD-LIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIA 775
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
++Q++ + RL ERG + ++D AL ++ A YDP+YGARP++R +++++ L++ ++
Sbjct: 776 QIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILS 835
Query: 827 EEIDENSTVYIDAS 840
E+ + ++A+
Sbjct: 836 GELVPGKVIRLEAN 849
>sp|Q9RA63|CLPB_THET8 Chaperone protein ClpB OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=clpB PE=1 SV=2
Length = 854
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/864 (52%), Positives = 608/864 (70%), Gaps = 30/864 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +++T EA+A A LA H HL LL D + + + AG + A
Sbjct: 1 MNLERWTQAAREALAQAQVLAQRMKHQAIDLPHLWAVLLKDERSLAWRLLEKAGADPKA- 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ + + + +LP A ++ L + RA+A + D ++AVD L+L L E
Sbjct: 60 -LKELQERELARLPKVEGAEVGQYLTSRLSGALNRAEALMEELKDRYVAVDTLVLALAEA 118
Query: 121 SQIGDLFKEAGV-AVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ G+ + +K +++LRG GR V++ ++T+ AL+ YG DL A GK
Sbjct: 119 T--------PGLPGLEALKGALKELRG--GRTVQTEHAESTYNALEQYGIDLTRLAAEGK 168
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRRV++IL RRTKNNPVLIGEPGVGKTA+VEGLAQRIV+GDVP L R
Sbjct: 169 LDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKR 228
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
+++L MG+L+AGAKYRGEFEERLKAV++EV +++G+VILFIDE+H V+GAG+ EG++DA
Sbjct: 229 IVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAG 288
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+LR IGATTL+EYR+ +EKD A ERRFQ VYV EP+V +T+SILRGLKEK
Sbjct: 289 NMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTVEETISILRGLKEK 347
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HHGVRI D A++ AA LS RYIT R LPDKAIDL+DEA A +R+ L+S PEEID LE
Sbjct: 348 YEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALE 407
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
RK++QLEIE AL+KEKD S+ RL + E+ L +++ L +++E+E + ++R +
Sbjct: 408 RKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQ 467
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQI 537
+ +E+ ++ AER+YDL RAA+LRYG + ++EA + L + E D I
Sbjct: 468 HRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEED-I 526
Query: 538 AEVVSRWTGIPVTRLGQNEK-----------ERLIGLAEAVNAVAESVLRSRAGLGRPQQ 586
AE+VSRWTGIPV++L + E+ +R++G EA+ AVA+++ R+RAGL P +
Sbjct: 527 AEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNR 586
Query: 587 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 646
P GSFLFLGPTGVGKTELAK LA LFD E ++RIDM+EYME+H+VSRLIGAPPGYVG+
Sbjct: 587 PIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGY 646
Query: 647 EEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM 706
EEGGQLTEAVRRRPYSV+LFDE+EKAH VFN LLQ+LDDGRLTD GRTVDFRNTVII+
Sbjct: 647 EEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIIL 706
Query: 707 TSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVA 766
TSNLG+ +L G+ + RD+V + +++HFRPE LNRLDEIVVF PL+ EQ+R++
Sbjct: 707 TSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIV 766
Query: 767 RLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVR 826
+Q+ + RLAE+ ++L +T+AA D + YDP++GARP+RR +++++ T L++ ++
Sbjct: 767 EIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILA 826
Query: 827 EEIDENSTVYIDASPKGDNLVYRV 850
E+ E V +D P G LV+ V
Sbjct: 827 GEVKEGDRVQVDVGPAG--LVFAV 848
>sp|Q98G96|CLPB_RHILO Chaperone protein ClpB OS=Rhizobium loti (strain MAFF303099)
GN=clpB PE=3 SV=1
Length = 868
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/865 (51%), Positives = 599/865 (69%), Gaps = 25/865 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +K++ + I A +A S H QFTP H+ L+ D G+ A I AGG +
Sbjct: 1 MNLEKYSERVRGFIQSAQTMALSRNHQQFTPEHILKVLVDDDEGLAASLIERAGGN--VR 58
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLI--LGLL 118
+ A++ +P ++ + L KV A+ K GD+ + V++L+ L +
Sbjct: 59 DVKLGVETALEAMPKVEGGNGQLYLAQPLAKVFSTAEELAKKAGDSFVTVERLLQALTME 118
Query: 119 EDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVE--QAG 176
+ ++ D+ +AGV + + +R +GR +SAS + + ALK Y RDL +AG
Sbjct: 119 KSAKTADILAKAGVTAQALNQVINDVR--KGRTADSASAEQNYDALKKYARDLTADARAG 176
Query: 177 KLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADV 236
KLDPVIGRD+EIRR +++LSRRTKNNPVLIGEPGVGKTA+ EGLA RIV GDVP +L D
Sbjct: 177 KLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 236
Query: 237 RLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 296
+L+ALDMGAL+AGAKYRGEFEERLKAVL EV A G +ILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 QLMALDMGALIAGAKYRGEFEERLKAVLSEVTSANGNIILFIDEMHTLVGAGKADGAMDA 296
Query: 297 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKE 356
+NL KP LARG+L C+GATTL+EYRK+VEKD A RRFQ V+V EP+V DTVSILRGLKE
Sbjct: 297 SNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVFVDEPTVEDTVSILRGLKE 356
Query: 357 KYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 416
KYE HH VRI D ALV AA LS RYI R LPDKAIDLVDEA + +R+Q+DS+PE +D +
Sbjct: 357 KYEQHHKVRISDSALVAAATLSNRYIADRFLPDKAIDLVDEAASRLRMQVDSKPEALDEI 416
Query: 417 ERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRL 476
+R+ MQL+IE AL+ E D ASK RLV + KEL L ++ + +++ EK+++ L
Sbjct: 417 DRRIMQLKIEREALKVETDDASKDRLVRLEKELVGLEEESTEITAKWQAEKQKLGLAADL 476
Query: 477 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQ 536
K++ +E L A+R+ + RA +L YG I E+E + + E Q + M+ E V PD
Sbjct: 477 KKQLDEARNELAIAQRKGEFQRAGELAYGKIPELEKKLKEAEA-QDGKAGMVEEVVTPDH 535
Query: 537 IAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQ 585
+A +VSRWTGIPV ++ Q E+++L +G EAV AV+++V R+RAGL P
Sbjct: 536 VAHIVSRWTGIPVDKMLQGERDKLLRMEDEIGKRVVGQGEAVQAVSKAVRRARAGLQDPN 595
Query: 586 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 645
+P GSF+FLGPTGVGKTEL KALA LFDD++ +VRIDMSE+ME+HSV+RLIGAPPGYVG
Sbjct: 596 RPIGSFIFLGPTGVGKTELTKALASFLFDDDSAMVRIDMSEFMEKHSVARLIGAPPGYVG 655
Query: 646 HEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVII 705
+EEGG LTEAVRRRPY VVLFDE+EKAH VFN LLQVLDDGRLTDGQGRTVDFRNT+II
Sbjct: 656 YEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLII 715
Query: 706 MTSNLGAEHLLSGMMGK-VTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
MTSNLGAE+L++ +G+ + RD+V+ VR FRPE LNR+DE+++F L + + +
Sbjct: 716 MTSNLGAEYLVN--LGEDQDVDAVRDEVMGVVRASFRPEFLNRVDEVILFHRLRRKDMDR 773
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ +Q K + L +R + L++ A++ + A+ YDP YGARP++R ++K++ L+ +
Sbjct: 774 IVEIQFKRLESLLVDRKITLSLDHEAIEWLAAKGYDPAYGARPLKRVMQKELQDPLAEKI 833
Query: 825 VREEIDENSTVYIDASPKGDNLVYR 849
+ EI + STV + + D L +R
Sbjct: 834 LLGEILDGSTVKVTSG--SDRLNFR 856
>sp|Q8G4X4|CLPB_BIFLO Chaperone protein ClpB OS=Bifidobacterium longum (strain NCC 2705)
GN=clpB PE=3 SV=1
Length = 889
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/863 (52%), Positives = 603/863 (69%), Gaps = 35/863 (4%)
Query: 5 KFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAER 64
KFT EA+ A + A++AG+AQ LH+ ALL +G+ I AGG+ A A
Sbjct: 4 KFTTMAQEAVGDAIQSASAAGNAQVETLHVMDALLRQENGVARSLIEAAGGDPQAIGA-- 61
Query: 65 VFNQAMKKLPSQTPAPDEIP-ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL--EDS 121
A+ LPS + + P AS L I +A+ + GD +++ + L++G+ + +
Sbjct: 62 AVRNALVALPSASGSSTSQPQASRQLTAAIAQAEKEMQQMGDEYVSTEHLLIGIAASKPN 121
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
Q ++ ++ GV A ++ V +RG G KV S + +++AL+ Y DL A GKLD
Sbjct: 122 QSAEILEKNGVTAASLRKAVPGVRG--GAKVTSPDAEGSYKALEKYSTDLTAAAKEGKLD 179
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGRD+EIRRV++ILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV GDVP+ L +LI
Sbjct: 180 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQGKKLI 239
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+LD+G++VAG+KYRGEFEERLK+VL E++ A+G++I FIDEIH ++GAG EGSMDA N+
Sbjct: 240 SLDLGSMVAGSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNM 299
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARG+LR IGATTL+EYR+ +EKD A ERRFQQV+V EPSV DT++ILRGLK++YE
Sbjct: 300 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYE 359
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
HH V I D ALV AA LS RYI+GR LPDKAIDLVDEA A++R++LDS PEEID L+RK
Sbjct: 360 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRK 419
Query: 420 RMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQK 479
+LE+E L+K +D ASK RL +++ EL D R+KL L R+ E+ +++ L+ K
Sbjct: 420 VTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAK 479
Query: 480 REELLFALQEAERRYDLARAADLRYGAIQEVEAAI-----------GQLEGNQSDENLML 528
++L + R +LA A+ + YG I ++ + N +DE M+
Sbjct: 480 LDDLRVQADKYTREGNLAEASKILYGEIPSIQKELAAAESADAESADASAANPADEP-MV 538
Query: 529 TETVGPDQIAEVVSRWTGIPVTRL--GQNEK---------ERLIGLAEAVNAVAESVLRS 577
+ V D +AE+VS WTGIPV RL G+NEK +R+IG EA+ AV+++V RS
Sbjct: 539 PDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLHMEDYLGKRVIGQKEAIAAVSDAVRRS 598
Query: 578 RAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLI 637
RAG+ P +PTGSFLFLGPTGVGKTELAKALA+ LFDDE +VRIDMSEYME+ SVSRLI
Sbjct: 599 RAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLI 658
Query: 638 GAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTV 697
GA PGYVG+E+GGQLTEAVRRRPYSVVLFDEVEKA+ +F+ LLQVLDDGRLTDGQGRTV
Sbjct: 659 GAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTV 718
Query: 698 DFRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPL 757
DF+NT++IMTSNLG++ L++ M + V+ V +F+PE LNRLD+IV+F PL
Sbjct: 719 DFKNTILIMTSNLGSQFLVNEDM---DADAKKKAVMDAVHMNFKPEFLNRLDDIVMFHPL 775
Query: 758 SHEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVV 817
+ E+L + +Q+ V+ RL +R + L VTD+A + + YDP YGARP+RR ++ +V
Sbjct: 776 TREELGGIVDIQVAGVSQRLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVG 835
Query: 818 TELSRMLVREEIDENSTVYIDAS 840
+L+RML+ ++ + TV +D +
Sbjct: 836 DQLARMLLAGKVHDGDTVLVDQT 858
>sp|O94641|HS104_SCHPO Heat shock protein 104 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hsp104 PE=3 SV=1
Length = 905
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/867 (50%), Positives = 589/867 (67%), Gaps = 40/867 (4%)
Query: 6 FTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDP----SGIFAQAINNAGGENAAQS 61
FT K + ++ A+ +A S GH+Q TP+H+A ALLSD + + ++ AGG+ Q
Sbjct: 6 FTDKAAKTLSDAYSIAQSYGHSQLTPIHIAAALLSDSDSNGTTLLRTIVDKAGGD--GQK 63
Query: 62 AERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS 121
ER + +LP+Q P P+++ S K++R A QK D+++A D I +D
Sbjct: 64 FERSVTSRLVRLPAQDPPPEQVTLSPESAKLLRNAHELQKTQKDSYIAQDHFIAVFTKDD 123
Query: 122 QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLD 179
+ L EAGV + V +RG ++++S + + F AL + DL E A G+LD
Sbjct: 124 TLKSLLAEAGVTPKAFEFAVNNVRG--NKRIDSKNAEEGFDALNKFTVDLTELARNGQLD 181
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGR++EIRR +R+LSRRTKNNPVLIGEPGVGKT++ EGLA+RI+ DVP+NL++ +L+
Sbjct: 182 PVIGREDEIRRTIRVLSRRTKNNPVLIGEPGVGKTSIAEGLARRIIDDDVPANLSNCKLL 241
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS-MDAAN 298
+LD+G+LVAG+K+RGEFEER+K+VLKEVEE+E +ILF+DE+HL++GAG MDAAN
Sbjct: 242 SLDVGSLVAGSKFRGEFEERIKSVLKEVEESETPIILFVDEMHLLMGAGSGGEGGMDAAN 301
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KPMLARG+L CIGATTL EY+KY+EKDAAFERRFQ + V EPS+ DT+SILRGLKEKY
Sbjct: 302 LLKPMLARGKLHCIGATTLAEYKKYIEKDAAFERRFQIILVKEPSIEDTISILRGLKEKY 361
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HHGV I DRALV AA L++RY+T R LPD AIDLVDEA A VRV +SQPE +DNLER
Sbjct: 362 EVHHGVTISDRALVTAAHLASRYLTSRRLPDSAIDLVDEAAAAVRVTRESQPEVLDNLER 421
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
K QL +E+ ALE+EKD+ASK RL RKE + + ++ +P+ +Y+ EK R E++ K+
Sbjct: 422 KLRQLRVEIRALEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKR 481
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE------------GNQSDENL 526
+ +EL ++AERR D AADL+Y I +++ I LE Q
Sbjct: 482 RLDELKAKAEDAERRNDFTLAADLKYYGIPDLQKRIEYLEQQKRKADAEAIANAQPGSEP 541
Query: 527 MLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVL 575
+L + VGPDQI E+V+RWTGIPVTRL EKERL IG EAV AVA ++
Sbjct: 542 LLIDVVGPDQINEIVARWTGIPVTRLKTTEKERLLNMEKVLSKQVIGQNEAVTAVANAIR 601
Query: 576 RSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSR 635
SRAGL P QP SFLF GP+G GKT L KALA +FDDEN ++RIDMSEYME+HSVSR
Sbjct: 602 LSRAGLSDPNQPIASFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKHSVSR 661
Query: 636 LIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGR 695
LIGAPPGYVGHE GGQLTE +RRRPYSV+LFDE+EKA V LLQVLDDGR+T GQG+
Sbjct: 662 LIGAPPGYVGHEAGGQLTEQLRRRPYSVILFDEIEKAAPEVLTVLLQVLDDGRITSGQGQ 721
Query: 696 TVDFRNTVIIMTSNLGAEHLLSGMM---GKVTMQVARDQVLQEVRKHFRPELLNRLDEIV 752
VD +N VIIMTSNLGAE+L + GK+ R+ V+ +R FRPE LNR+ IV
Sbjct: 722 VVDAKNAVIIMTSNLGAEYLTTDNESDDGKID-STTREMVMNSIRGFFRPEFLNRISSIV 780
Query: 753 VFDPLSHEQLRKVARLQMKDVAIRLA--ERGVALAVTDAALDIVLAESYDPIYGARPIRR 810
+F+ L +R + ++ +V RL R + + V+D A D++ + Y P YGARP+ R
Sbjct: 781 IFNRLRRVDIRNIVENRILEVQKRLQSNHRSIKIEVSDEAKDLLGSAGYSPAYGARPLNR 840
Query: 811 WLEKKVVTELSRMLVREEIDENSTVYI 837
++ +V+ ++ +++ ++ + T ++
Sbjct: 841 VIQNQVLNPMAVLILNGQLRDKETAHV 867
>sp|Q7VNH1|CLPB_HAEDU Chaperone protein ClpB OS=Haemophilus ducreyi (strain 35000HP /
ATCC 700724) GN=clpB PE=3 SV=1
Length = 856
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/858 (51%), Positives = 602/858 (70%), Gaps = 32/858 (3%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENA 58
MN +KFT K EA+ A LA + +A P+HL AL+ G A N +
Sbjct: 1 MNFEKFTTKLQEALNEAQSLAVAKDNAYIEPVHLLYALVKQQDGAIAPLFTTLNVSTQTL 60
Query: 59 AQSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLL 118
E + NQ LP T + AS LI+++ + + D+ ++ + +L L
Sbjct: 61 INELELILNQ----LPQVTGTTTQ--ASQQLIRLLNQTAKLAQQFNDSFISSELFLLAAL 114
Query: 119 ED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA-- 175
+D +G LFK G+ V + ++RG G V + + + T QAL+ Y DL E+A
Sbjct: 115 DDHGSLGKLFKAFGLTKENVTQAISQMRG--GESVNNQNAEQTRQALQKYTIDLTERAKT 172
Query: 176 GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAD 235
GKLDPVIGRDEEIRR V++L RRTKNNPVLIGEPGVGKTA+VEGLAQRIV G+VP L +
Sbjct: 173 GKLDPVIGRDEEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKN 232
Query: 236 VRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMD 295
R+++LDMGAL+AGAKYRGEFEERLKAVL E+ + EG+VILFIDEIH ++GAG+T+G+MD
Sbjct: 233 KRVLSLDMGALIAGAKYRGEFEERLKAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMD 292
Query: 296 AANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLK 355
A NL KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V V EPSV DT++ILRGLK
Sbjct: 293 AGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLK 352
Query: 356 EKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDN 415
E+YE HH V+I D A+V AA LS RYI+ R LPDKAIDL+DEA +++R+++DS+PE +D
Sbjct: 353 ERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDK 412
Query: 416 LERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRR 475
LER+ +QL++E AL+KEKD+AS+ RL ++ +E+ + L +K EK + +
Sbjct: 413 LERRIIQLKLERQALQKEKDEASRQRLAKLDEEMTAKAQEYSALEEVWKAEKSALLGTQH 472
Query: 476 LKQKREELLFALQEAERRYDLARAADLRYGAI----QEVEAAIGQLEGNQSDENLMLTET 531
LK + E A+ +A+R + + ++L+YG I ++++ AI + E N +D +L+ T+
Sbjct: 473 LKTELENARIAMDQAKRADNFEKMSELQYGTIPALEKQLQDAIKREEEN-NDHHLLRTK- 530
Query: 532 VGPDQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAG 580
V ++IAEV+S+ TGIP+T++ + EKE+L IG EAV AVA ++LRSRAG
Sbjct: 531 VTEEEIAEVLSKATGIPITKMMEGEKEKLLRMEQVLHSRVIGQNEAVEAVANAILRSRAG 590
Query: 581 LGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAP 640
L P +P GSFLFLGPTGVGKTEL+K LA LFDDEN +VRIDMSE+ME+HSVSRL+GAP
Sbjct: 591 LADPNKPIGSFLFLGPTGVGKTELSKTLANFLFDDENAIVRIDMSEFMEKHSVSRLVGAP 650
Query: 641 PGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFR 700
PGYVG+E+GG LTEAVRRRPYSVVL DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFR
Sbjct: 651 PGYVGYEQGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710
Query: 701 NTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHE 760
NTV+IMTSNLGA HL+ ++T ++ V+ V +HFRPE +NR+DE VVF PL +
Sbjct: 711 NTVVIMTSNLGA-HLIQE-NAEITYLAMKEMVMSVVSQHFRPEFINRIDETVVFHPLDQQ 768
Query: 761 QLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTEL 820
+R +A +Q++ + RLAERG + ++D ALD + +D ++GARP++R +++++ L
Sbjct: 769 HIRAIANIQLQRLIRRLAERGYQVTISDTALDHISQAGFDSLFGARPLKRAIQQELENPL 828
Query: 821 SRMLVREEIDENSTVYID 838
++ ++ ++ N+ V ID
Sbjct: 829 AQQILSGKLLPNNPVIID 846
>sp|Q8RHQ8|CLPB_FUSNN Chaperone protein ClpB OS=Fusobacterium nucleatum subsp. nucleatum
(strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)
GN=clpB PE=3 SV=2
Length = 857
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/860 (49%), Positives = 602/860 (70%), Gaps = 36/860 (4%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGG--ENA 58
MNP++FT T AI +A +++ P LA+ LL +G+ + I G +
Sbjct: 1 MNPNQFTENTISAINLAVDISKGNMQQSIKPEALALGLLMQNNGLIPRVIEKMGLNLQYI 60
Query: 59 AQSAERVFNQAMK---KLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLIL 115
E+ N K K+ ++ + D+ S ++ RA+ D+ L+V+ +
Sbjct: 61 ISELEKEMNNYPKVEVKVSNENISLDQKTNS-----ILNRAEKIMNEMEDSFLSVEHIFK 115
Query: 116 GLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA 175
++E+ I FK G+++ + + +RG RKV++ + + T++ L+ Y +DLVE A
Sbjct: 116 AMIEEMPI---FKRFGISLEKYMEVLMNIRG--NRKVDNQNPEATYEVLEKYAKDLVELA 170
Query: 176 --GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNL 233
GK+DP+IGRD EIRR ++I+SRRTKN+P+LIGEPGVGKTA+VEGLAQRI+ GDVP +L
Sbjct: 171 REGKIDPIIGRDSEIRRAIQIISRRTKNDPILIGEPGVGKTAIVEGLAQRILNGDVPESL 230
Query: 234 ADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS 293
+ ++ +LDMGALVAGAKY+GEFEER+K VLKEVEE+ G +ILFIDEIH ++GAG+ EGS
Sbjct: 231 KNKKIFSLDMGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGS 290
Query: 294 MDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRG 353
+DA N+ KPMLARG+LR IGATT++EYRKY+EKD A ERRFQ + V EP+V DT+SILRG
Sbjct: 291 LDAGNMLKPMLARGELRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNVDDTISILRG 350
Query: 354 LKEKYEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEI 413
LK+K+E +HGVRI D A+V AA LS RYI+ R LPDKAIDL+DEA A +R ++DS PEE+
Sbjct: 351 LKDKFETYHGVRITDTAIVEAATLSQRYISDRKLPDKAIDLIDEAAAMIRTEIDSMPEEL 410
Query: 414 DNLERKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEI 473
D L RK +QLEIE+ ALEKE D ASK RL + KEL +L ++ + L +++ EKE I +I
Sbjct: 411 DQLTRKALQLEIEIKALEKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDISKI 470
Query: 474 RRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSD----ENLMLT 529
+ +K++ E + +++AER YDL + ++L+YG + +E + Q + N+ D EN +L
Sbjct: 471 KNIKREIENVKLEMEKAEREYDLTKLSELKYGKLATLEKEL-QEQQNKVDKDGKENSLLK 529
Query: 530 ETVGPDQIAEVVSRWTGIPVTRLGQNEKERLI-----------GLAEAVNAVAESVLRSR 578
+ V D+IA++VSRWTGIPV++L + +KE+++ G EA+ +VA+++LRS
Sbjct: 530 QEVTADEIADIVSRWTGIPVSKLTETKKEKMLHLEDHIKERVKGQDEAIKSVADTMLRSV 589
Query: 579 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 638
AGL P +P GSF+FLGPTGVGKT LAK LA LFD E+ +VRIDMSEYM++ SV+RLIG
Sbjct: 590 AGLKDPNRPMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDNVVRIDMSEYMDKFSVTRLIG 649
Query: 639 APPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVD 698
APPGYVG+EEGGQLTEA+R +PYSV+LFDE+EKAH VFN LLQVLDDGRLTDGQGR VD
Sbjct: 650 APPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVD 709
Query: 699 FRNTVIIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLS 758
F+NT+IIMTSN+G+ +L + R++V E++ F+PE LNR+DEI+ F L
Sbjct: 710 FKNTLIIMTSNIGSHFILE---DPNLSEDTREKVADELKARFKPEFLNRIDEIITFKALD 766
Query: 759 HEQLRKVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVT 818
++++ +L +KD+ +L + + L +D +D + +YDP YGARP+RR++++++ T
Sbjct: 767 LPAIKEIVKLSLKDLENKLKPKHITLEFSDKMVDYLANNAYDPHYGARPLRRYIQREIET 826
Query: 819 ELSRMLVREEIDENSTVYID 838
L++ ++ E+ E S V ID
Sbjct: 827 SLAKKILANEVHEKSNVLID 846
>sp|Q6MIV0|CLPB_BDEBA Chaperone protein ClpB OS=Bdellovibrio bacteriovorus (strain ATCC
15356 / DSM 50701 / NCIB 9529 / HD100) GN=clpB PE=3 SV=1
Length = 855
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/864 (50%), Positives = 594/864 (68%), Gaps = 30/864 (3%)
Query: 6 FTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAERV 65
T K+ EA+ A LA P HL + L+ GI + ++ A AE
Sbjct: 1 MTRKSQEAMQAAARLAERKSSPSVEPEHLLMELVQQTEGIVPRILDKLNVPQAQFLAE-- 58
Query: 66 FNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE--DSQI 123
+ K P T ++ AS L K+ + A+ + GD++++ + + +L+ DS++
Sbjct: 59 LRTKIDKFPQVTGGGQKMFASPRLEKIFQAAETEAQEWGDSYISTEHFFMAMLKGGDSEL 118
Query: 124 GDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPV 181
LFK+ V ++ + ++RGK+ KV + ++ L Y RDL A GKLDPV
Sbjct: 119 NGLFKKNKVTAEAARTALTEIRGKQ--KVTDDDPENKYEVLNKYARDLTALAAEGKLDPV 176
Query: 182 IGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIAL 241
+GRDEEIRRVV++LSRRTKNNPVLIGEPGVGKTA+ EGLA RI++ DVP NL +L++L
Sbjct: 177 VGRDEEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIIKQDVPDNLIGKKLMSL 236
Query: 242 DMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFK 301
DMGAL+AGAKYRGEFE+RLKAV+KEV ++G++ILFIDE+H ++GAG+TEG+MDA L K
Sbjct: 237 DMGALIAGAKYRGEFEDRLKAVIKEVTSSDGQIILFIDELHTLVGAGKTEGAMDAGQLLK 296
Query: 302 PMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEGH 361
P LARG+LRCIGATTL+EYRKY+EKDAA ERRFQ V V EPSV D ++ILRGLKEKYE H
Sbjct: 297 PALARGELRCIGATTLDEYRKYIEKDAALERRFQTVMVEEPSVEDAITILRGLKEKYEVH 356
Query: 362 HGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRM 421
HG+RI D ALV A +LS RYIT R LPDKAIDL+DEA + + ++ S PEE+D +ER+ M
Sbjct: 357 HGIRITDAALVSAVKLSHRYITNRFLPDKAIDLIDEAASKLGIETRSVPEEVDKIERELM 416
Query: 422 QLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKRE 481
QL IE AL+KEKD++++ RL + KE+ +L K Q L +++ EK I+ I++LK E
Sbjct: 417 QLRIEKEALKKEKDESARERLAVIDKEITELNAKNQLLREQWEFEKGGIEGIKKLKADIE 476
Query: 482 ELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLE------GNQSDENLMLTETVGPD 535
+L A+ +AER DL +AA+L+YG + E E + LE S EN ML E VGP+
Sbjct: 477 DLKVAVAKAEREGDLGKAAELKYGKLPEAEKKLKALEERSKEGAKSSSENRMLKEEVGPE 536
Query: 536 QIAEVVSRWTGIPVTRLGQNE-----------KERLIGLAEAVNAVAESVLRSRAGLGRP 584
+AEVV++WTGIPV+++ ++E K R++G A+ VA+++ R+RA + P
Sbjct: 537 DVAEVVAKWTGIPVSKMLESESQKLLHMEDSLKHRVVGQDHALTIVADAIRRARAEISDP 596
Query: 585 QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+P G+F+FLGPTGVGKTE KALAE LFDDE +VRIDMSEYME+H+VSRLIGAPPGYV
Sbjct: 597 NRPIGTFMFLGPTGVGKTETVKALAEFLFDDEQAVVRIDMSEYMEKHAVSRLIGAPPGYV 656
Query: 645 GHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVI 704
G+EEGGQLTE+VRRRPYSVVL DEVEKAH VFN LLQVLDDGRLTDGQGRTVDF+NTV+
Sbjct: 657 GYEEGGQLTESVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVL 716
Query: 705 IMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRK 764
IMTSN+G++ +L M + R+ V + +R+ FRPE LNR+DEIV+F L Q+
Sbjct: 717 IMTSNVGSQSILDPGMSE---NQKREAVNEALRERFRPEFLNRIDEIVMFKSLGEAQISG 773
Query: 765 VARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRML 824
+ ++Q+ VA RL + + + A+D + + YDPIYGARP++R ++ +++ LS+ +
Sbjct: 774 IVKVQLDLVAQRLRAKKIGIDFNQEAIDFLAKKGYDPIYGARPLKRVIQTELLNPLSKEI 833
Query: 825 VREEIDENSTVYIDASPKGDNLVY 848
+ ++ T+++ A+ G L +
Sbjct: 834 ISGKVKAGDTIHVKAN--GSTLTF 855
>sp|P63284|CLPB_ECOLI Chaperone protein ClpB OS=Escherichia coli (strain K12) GN=clpB
PE=1 SV=1
Length = 857
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/846 (52%), Positives = 589/846 (69%), Gaps = 25/846 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ NQA+ +LP ++ S L++V+ + GD ++ + +L LE
Sbjct: 60 LRTDI-NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ D+ K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLADILKAAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTIDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +EL D + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEA---AIGQLEGNQSDENLMLTETVGP 534
+ E+ A+++A R DLAR ++L+YG I E+E A QLEG +L V
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR---LLRNKVTD 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
+IAEV++RWTGIPV+R+ ++E+E+L IG EAV+AV+ ++ RSRAGL
Sbjct: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL KALA +FD + +VRIDMSE+ME+HSVSRL+GAPPGY
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV
Sbjct: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ G++ ++ VL V +FRPE +NR+DE+VVF PL + +
Sbjct: 714 VIMTSNLGSD-LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+A++Q+K + RL ERG + ++D AL ++ YDP+YGARP++R +++++ L++
Sbjct: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832
Query: 824 LVREEI 829
++ E+
Sbjct: 833 ILSGEL 838
>sp|P63286|CLPB_ECOL6 Chaperone protein ClpB OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=clpB PE=3 SV=1
Length = 857
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/846 (52%), Positives = 589/846 (69%), Gaps = 25/846 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ NQA+ +LP ++ S L++V+ + GD ++ + +L LE
Sbjct: 60 LRTDI-NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ D+ K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLADILKAAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTIDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +EL D + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEA---AIGQLEGNQSDENLMLTETVGP 534
+ E+ A+++A R DLAR ++L+YG I E+E A QLEG +L V
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR---LLRNKVTD 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
+IAEV++RWTGIPV+R+ ++E+E+L IG EAV+AV+ ++ RSRAGL
Sbjct: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL KALA +FD + +VRIDMSE+ME+HSVSRL+GAPPGY
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV
Sbjct: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ G++ ++ VL V +FRPE +NR+DE+VVF PL + +
Sbjct: 714 VIMTSNLGSD-LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+A++Q+K + RL ERG + ++D AL ++ YDP+YGARP++R +++++ L++
Sbjct: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832
Query: 824 LVREEI 829
++ E+
Sbjct: 833 ILSGEL 838
>sp|P63285|CLPB_ECO57 Chaperone protein ClpB OS=Escherichia coli O157:H7 GN=clpB PE=3
SV=1
Length = 857
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/846 (52%), Positives = 589/846 (69%), Gaps = 25/846 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
M D+ T+K A+A A LA + PLHL ALL+ G + + +AG NA Q
Sbjct: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAG-INAGQ 59
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
+ NQA+ +LP ++ S L++V+ + GD ++ + +L LE
Sbjct: 60 LRTDI-NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118
Query: 121 -SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GK 177
+ D+ K AG A + +E++RG G V + QALK Y DL E+A GK
Sbjct: 119 RGTLADILKAAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTIDLTERAEQGK 176
Query: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVR 237
LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R
Sbjct: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236
Query: 238 LIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAA 297
++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA
Sbjct: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296
Query: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEK 357
N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DT++ILRGLKE+
Sbjct: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356
Query: 358 YEGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417
YE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+
Sbjct: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416
Query: 418 RKRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLK 477
R+ +QL++E AL KE D+ASK RL + +EL D + L +K EK + + +K
Sbjct: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476
Query: 478 QKREELLFALQEAERRYDLARAADLRYGAIQEVEA---AIGQLEGNQSDENLMLTETVGP 534
+ E+ A+++A R DLAR ++L+YG I E+E A QLEG +L V
Sbjct: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR---LLRNKVTD 533
Query: 535 DQIAEVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGR 583
+IAEV++RWTGIPV+R+ ++E+E+L IG EAV+AV+ ++ RSRAGL
Sbjct: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593
Query: 584 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 643
P +P GSFLFLGPTGVGKTEL KALA +FD + +VRIDMSE+ME+HSVSRL+GAPPGY
Sbjct: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653
Query: 644 VGHEEGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTV 703
VG+EEGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV
Sbjct: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713
Query: 704 IIMTSNLGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLR 763
+IMTSNLG++ L+ G++ ++ VL V +FRPE +NR+DE+VVF PL + +
Sbjct: 714 VIMTSNLGSD-LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772
Query: 764 KVARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRM 823
+A++Q+K + RL ERG + ++D AL ++ YDP+YGARP++R +++++ L++
Sbjct: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832
Query: 824 LVREEI 829
++ E+
Sbjct: 833 ILSGEL 838
>sp|F4JVJ1|CLPB2_ARATH Putative chaperone protein ClpB2, chloroplastic OS=Arabidopsis
thaliana GN=CLPB2 PE=2 SV=1
Length = 623
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/657 (67%), Positives = 514/657 (78%), Gaps = 50/657 (7%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG-GENAA 59
MN KF +A A A S H Q TPLHL V L+SD + +F +AI +AG G+ +A
Sbjct: 1 MNDLKFDPNVKLILASARSHAMSLSHGQVTPLHLGVTLISDLTSVFYRAITSAGDGDISA 60
Query: 60 QSAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE 119
QS V NQ++ KL ++ GDT + V L++ LLE
Sbjct: 61 QSVVNVINQSLYKL-------------------------TKRNLGDTKVGVAVLVISLLE 95
Query: 120 DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLD 179
DSQI D+ KEAGV +VKSEVEKLRG + +ALKTYG DLVEQAGKLD
Sbjct: 96 DSQISDVLKEAGVVPEKVKSEVEKLRG-----------EVILRALKTYGTDLVEQAGKLD 144
Query: 180 PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI 239
PVIGR EIRRV+ +LSRRTKNNPVLIGEPGVGKTAVVEGLAQRI++GDVP NL V+LI
Sbjct: 145 PVIGRHREIRRVIEVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRILKGDVPINLTGVKLI 204
Query: 240 ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL 299
+L+ GA+VAG RG+FEERLK+VLK VEEA+GKV+LFIDEIH+ LGA + GS DAA L
Sbjct: 205 SLEFGAMVAGTTLRGQFEERLKSVLKAVEEAQGKVVLFIDEIHMALGACKASGSTDAAKL 264
Query: 300 FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYE 359
KPMLARGQLR IGATTLEEYR +VEKDAAFERRFQQV+VAEPSVPDT+SILRGLKEKYE
Sbjct: 265 LKPMLARGQLRFIGATTLEEYRTHVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKYE 324
Query: 360 GHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK 419
GHHGVRIQDRALV++AQLS RYITGR LPDKAIDLVDE+CA+V+ QLD QPEEID+LERK
Sbjct: 325 GHHGVRIQDRALVLSAQLSERYITGRRLPDKAIDLVDESCAHVKAQLDIQPEEIDSLERK 384
Query: 420 RMQLEIELHALEKEK-DKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
MQLEIE+HALEKEK DKAS+ARL EVRKELDDLRDKL+PL ++YKKEK+ I+E RRLKQ
Sbjct: 385 VMQLEIEIHALEKEKDDKASEARLSEVRKELDDLRDKLEPLTIKYKKEKKIINETRRLKQ 444
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
R++L+ ALQEAER++D+ +AA L+YGAIQEVE+AI +LE + D N+MLTETVGP+ IA
Sbjct: 445 NRDDLMIALQEAERQHDVPKAAVLKYGAIQEVESAIAKLEKSAKD-NVMLTETVGPENIA 503
Query: 539 EVVSRWTGIPVTRLGQNEKERLIGLA-----------EAVNAVAESVLRSRAGLGRPQQP 587
EVVSRWTGIPVTRL QNEK+RLI LA EAV AVA ++LRSR GLGRPQQP
Sbjct: 504 EVVSRWTGIPVTRLDQNEKKRLISLADKLHERVVGQDEAVKAVAAAILRSRVGLGRPQQP 563
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYV 644
+GSFLFLGPTGVGKTELAKALAEQLFD ENLLVR+DMSEY ++ SV++LIGAPPGYV
Sbjct: 564 SGSFLFLGPTGVGKTELAKALAEQLFDSENLLVRLDMSEYNDKFSVNKLIGAPPGYV 620
>sp|Q9CKC0|CLPB_PASMU Chaperone protein ClpB OS=Pasteurella multocida (strain Pm70)
GN=clpB PE=3 SV=1
Length = 855
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/853 (50%), Positives = 589/853 (69%), Gaps = 23/853 (2%)
Query: 1 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ 60
MN +KFT K +A+ A LA + P+HL ALL+ G A + +G
Sbjct: 1 MNIEKFTTKFQQALQEAQSLAIGKDNQFIEPVHLLTALLNQQGGSTAPILTASGANLPLL 60
Query: 61 SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED 120
E N + KLP + + ++ S +L+ ++ + D ++ + +L LED
Sbjct: 61 RNE--LNAELSKLPQVSGSGGDVQVSRSLVNLLNLCDKLAQQRQDKFISSELFLLAALED 118
Query: 121 SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKL 178
+GD+ K+ GV ++ +EK+RG G+ V + + + QAL+ Y DL +A GKL
Sbjct: 119 KTLGDVLKKCGVKKENLQQAIEKVRG--GQNVNDPNAEESRQALEKYTIDLTARAESGKL 176
Query: 179 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRL 238
DPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRIV G+VP L + R+
Sbjct: 177 DPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRV 236
Query: 239 IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN 298
++LDMGAL+AGAKYRGEFEERLKAVL E+ + EG+VILFIDEIH ++GAG+T+G+MDA N
Sbjct: 237 LSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGN 296
Query: 299 LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKY 358
L KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+V EP+V DT++ILRGLKE+Y
Sbjct: 297 LLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERY 356
Query: 359 EGHHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER 418
E HH V+I D A+V AA LS RY++ R LPDKAIDL+DEA +++R+++DS+P+ +D LER
Sbjct: 357 EIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLER 416
Query: 419 KRMQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQ 478
+ +QL++E AL+KE D AS+ RL + KEL + + L +K EK + + +K
Sbjct: 417 RIIQLKLEQQALQKEDDDASRKRLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKA 476
Query: 479 KREELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIA 538
+ + +++A R D A+ ++L+YG I +E + Q E + E +L V ++IA
Sbjct: 477 ELDSAKTQMEQARRASDFAKMSELQYGVIPALEKQLAQAESAEGKEMTLLRYRVTDEEIA 536
Query: 539 EVVSRWTGIPVTRLGQNEKERL-----------IGLAEAVNAVAESVLRSRAGLGRPQQP 587
EV+SR TGIPV ++ + EKE+L IG EA+ AV+ ++ RSRAGL P +P
Sbjct: 537 EVLSRATGIPVAKMMEGEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRP 596
Query: 588 TGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHE 647
GSFLFLGPTGVGKTEL K LA LFDDEN +VRIDMSE+ME+HSVSRL+GAPPGYVG+E
Sbjct: 597 IGSFLFLGPTGVGKTELCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYE 656
Query: 648 EGGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMT 707
EGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRNTV+IMT
Sbjct: 657 EGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMT 716
Query: 708 SNLGAEHLL--SGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKV 765
SNLG+ HL+ + + +M ++ V+ V +HFRPE +NR+DE VVF PL E +R++
Sbjct: 717 SNLGS-HLIQENSTLDYPSM---KELVMSVVGQHFRPEFINRIDETVVFHPLGKENIREI 772
Query: 766 ARLQMKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLV 825
A +Q+ + R+ G L TDA LD + YDP+YGARP++R +++++ L++ ++
Sbjct: 773 ATIQLARLIKRMESHGYQLHFTDACLDFIGEVGYDPVYGARPLKRAIQQEIENPLAQQIL 832
Query: 826 REEIDENSTVYID 838
++ N V ID
Sbjct: 833 SGKLLPNQLVTID 845
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 322,589,974
Number of Sequences: 539616
Number of extensions: 14023559
Number of successful extensions: 80152
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 2076
Number of HSP's that attempted gapping in prelim test: 73695
Number of HSP's gapped (non-prelim): 6924
length of query: 900
length of database: 191,569,459
effective HSP length: 127
effective length of query: 773
effective length of database: 123,038,227
effective search space: 95108549471
effective search space used: 95108549471
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)