BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046260
MISSPSSFYRFIFIFSVILSIRLVSSASLCPQDSVVFLNNLQSQCPPGISPNPPFEVDGE
FLDRALTSKQRNAYTSVLFYASWCPFSRDVRPTFEALSSMFPQMEHYTIEQSSALPRYLL
TYFQYNGFIGCDLLNFLLVSLLFAGFDPVEYFAEDESISLERTDHPWFVSSTREIIQREP
YLVFAVLFLCLRVLVYIFPEVLSRLKAFWVSYVPHLNLEIFGETSQLFGRALHMVDVRRV
LTKLRICKTRNFREGAKNARVWASSLASVSLGESSSTRTSS

High Scoring Gene Products

Symbol, full name Information P value
APRL4
APR-like 4
protein from Arabidopsis thaliana 6.3e-17
APRL6
APR-like 6
protein from Arabidopsis thaliana 1.1e-14

The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046260
        (281 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2079439 - symbol:APRL5 "APR-like 5" species:37...   304  3.8e-56   2
TAIR|locus:2172354 - symbol:APRL7 "APR-like 7" species:37...   327  8.8e-55   2
TAIR|locus:2008366 - symbol:APRL4 "APR-like 4" species:37...   158  6.3e-17   2
TAIR|locus:2138733 - symbol:APRL6 "APR-like 6" species:37...   148  1.1e-14   2


>TAIR|locus:2079439 [details] [associations]
            symbol:APRL5 "APR-like 5" species:3702 "Arabidopsis
            thaliana" [GO:0045454 "cell redox homeostasis" evidence=IEA]
            InterPro:IPR013766 Pfam:PF00085 PROSITE:PS00194 GO:GO:0016021
            EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:3.40.30.10
            InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0045454 PROSITE:PS51352
            HOGENOM:HOG000239500 EMBL:AC009540 EMBL:AY059721 EMBL:AY091351
            IPI:IPI00530112 RefSeq:NP_566214.1 UniGene:At.18353
            UniGene:At.74853 ProteinModelPortal:Q93YX4 SMR:Q93YX4 PaxDb:Q93YX4
            PRIDE:Q93YX4 EnsemblPlants:AT3G03860.1 GeneID:821101
            KEGG:ath:AT3G03860 TAIR:At3g03860 eggNOG:NOG257531
            InParanoid:Q93YX4 OMA:SNARAWA PhylomeDB:Q93YX4
            ProtClustDB:CLSN2688048 Genevestigator:Q93YX4 Uniprot:Q93YX4
        Length = 300

 Score = 304 (112.1 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
 Identities = 61/123 (49%), Positives = 80/123 (65%)

Query:   145 GFDPVEYFAEDESISLERTDH---PWFVSST--REIIQREPYLVFAVLFLCLRVLVYIFP 199
             G  PV+Y AE E   L   D     W    T  REI +++P+LV ++LF+CL++ + +FP
Sbjct:   161 GLQPVQYVAEGEPTGLNAGDGNLITWLRKGTSIREIFKQDPFLVLSLLFICLQMAILVFP 220

Query:   200 EVLSRLKAFWVSYVPHLNLEIFGETSQLFGRALHMVDVRRVLTKLRICKTRNFREGAKNA 259
                SR++A W SYV +LNL  FGE SQLF R +HMVDVRR+  KL + KTRNF E AKNA
Sbjct:   221 IAESRMRALWASYVANLNLGRFGEISQLFNRGIHMVDVRRLWLKLSLVKTRNFHERAKNA 280

Query:   260 RVW 262
             + W
Sbjct:   281 QAW 283

 Score = 292 (107.8 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
 Identities = 65/151 (43%), Positives = 83/151 (54%)

Query:    28 SLCPQDSVVFLNNLQSQCPPGISPNPPFEVDGEFLDRALTSKQRNAYTSVLFYASWCPFS 87
             S+C  +  +F  +L+++CPP + P PP EVDG+ LDR + S+  NAY SVLFYASWCPFS
Sbjct:    30 SVCNYEFELFRFDLEAKCPPSLYPTPPIEVDGDSLDRLMASQHGNAYMSVLFYASWCPFS 89

Query:    88 RDVRPTFEALSSMFPQMEHYTIEQSSALP----RY----LLTYFQYNGFIGC------DX 133
             R VRP F+ LSSMFPQ++H  +E S ALP    RY    L +    N  +        D 
Sbjct:    90 RAVRPKFDMLSSMFPQIQHLAVEHSQALPSVFSRYGIHSLPSILMVNQTLNARYHGRKDL 149

Query:   134 XXXXXXXXXFAGFDPVEYFAEDESISLERTD 164
                        G  PV+Y AE E   L   D
Sbjct:   150 ISLIEFYEEATGLQPVQYVAEGEPTGLNAGD 180


>TAIR|locus:2172354 [details] [associations]
            symbol:APRL7 "APR-like 7" species:3702 "Arabidopsis
            thaliana" [GO:0045454 "cell redox homeostasis" evidence=IEA]
            InterPro:IPR013766 Pfam:PF00085 PROSITE:PS00194 GO:GO:0016021
            EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.40.30.10
            InterPro:IPR012336 SUPFAM:SSF52833 EMBL:AB012246 GO:GO:0045454
            PROSITE:PS51352 HOGENOM:HOG000239500 ProtClustDB:CLSN2688048
            EMBL:BT002852 EMBL:BT004434 EMBL:AY084364 EMBL:AK230330
            IPI:IPI00531634 RefSeq:NP_568360.1 UniGene:At.46795
            UniGene:At.75560 ProteinModelPortal:Q84JN1 SMR:Q84JN1
            EnsemblPlants:AT5G18120.1 GeneID:831930 KEGG:ath:AT5G18120
            TAIR:At5g18120 eggNOG:NOG299480 InParanoid:Q84JN1 OMA:HNGSSIR
            PhylomeDB:Q84JN1 Genevestigator:Q84JN1 Uniprot:Q84JN1
        Length = 289

 Score = 327 (120.2 bits), Expect = 8.8e-55, Sum P(2) = 8.8e-55
 Identities = 68/119 (57%), Positives = 84/119 (70%)

Query:   145 GFDPVEYFAEDESISLERTDH--PWFV--SSTREIIQREPYLVFAVLFLCLRVLVYIFPE 200
             G  PV+Y  E E  SL+   +   W    SS REI +REPY+V A++FL L++ + IFP 
Sbjct:   157 GLKPVQYMDEGEPTSLDTDGNLITWLHNGSSIREIAEREPYMVLALMFLSLKLAILIFPI 216

Query:   201 VLSRLKAFWVSYVPHLNLEIFGETSQLFGRALHMVDVRRVLTKLRICKTRNFREGAKNA 259
             + SRLK  W  YVPHL+L I GETSQLFGRALHM+DVRR+  KLR+ KTRNF+E AKNA
Sbjct:   217 MGSRLKTLWALYVPHLSLGILGETSQLFGRALHMIDVRRLWIKLRLTKTRNFQERAKNA 275

 Score = 256 (95.2 bits), Expect = 8.8e-55, Sum P(2) = 8.8e-55
 Identities = 51/114 (44%), Positives = 68/114 (59%)

Query:    12 IFIFSVILSIRLVSS---ASLCPQDSVVFLNNLQSQCPPGISPNPPFEVDGEFLDRALTS 68
             IF+ S I    L S      +C  +  VF + ++ +CP  + P+PP EVDG+ LD+ + +
Sbjct:     7 IFLVSAIAGSCLPSGFAYVDVCNHEFEVFRSVIEQKCPRSLYPSPPIEVDGDLLDKLMDA 66

Query:    69 KQRNAYTSVLFYASWCPFSRDVRPTFEALSSMFPQMEHYTIEQSSALPRYLLTY 122
                NAY S+LFY S CPFSR VRP F+ LSSMFP + H  +EQS ALP     Y
Sbjct:    67 NHGNAYISILFYTSRCPFSRAVRPKFDVLSSMFPHITHLIVEQSQALPSVFSRY 120


>TAIR|locus:2008366 [details] [associations]
            symbol:APRL4 "APR-like 4" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0045454 "cell redox homeostasis" evidence=IEA]
            InterPro:IPR013766 Pfam:PF00085 PROSITE:PS00194 GO:GO:0016021
            EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:3.40.30.10
            InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0045454 PROSITE:PS51352
            EMBL:AC007894 EMBL:AY059876 EMBL:AY093358 IPI:IPI00535287
            IPI:IPI00891252 RefSeq:NP_001117412.1 RefSeq:NP_564452.1
            UniGene:At.11485 UniGene:At.71179 HSSP:P20857
            ProteinModelPortal:Q9SA00 SMR:Q9SA00 EnsemblPlants:AT1G34780.1
            GeneID:840382 KEGG:ath:AT1G34780 TAIR:At1g34780 eggNOG:NOG286461
            HOGENOM:HOG000239500 InParanoid:Q9SA00 OMA:WCPFSRS PhylomeDB:Q9SA00
            ProtClustDB:CLSN2688281 Genevestigator:Q9SA00 Uniprot:Q9SA00
        Length = 310

 Score = 158 (60.7 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
 Identities = 41/117 (35%), Positives = 65/117 (55%)

Query:    20 SIRLVSSASLCPQDSVVFLNNLQSQCPPGISPN--PPF----EVDGEFLDRALTSKQRNA 73
             ++R+   A+   +DS+  L + Q+    G+  +  P F    E D  +L  AL    +N 
Sbjct:    22 AVRVPFCATKSAKDSIFGLRD-QTCSVSGVESDERPRFVAVTEGDERWLQIALDMIHKNK 80

Query:    74 --YTSVLFYASWCPFSRDVRPTFEALSSMFPQMEHYTIEQSSALPRYLLTYFQYNGF 128
               Y ++LFYASWCPFSR  RP+F+ +SS++  + H+ I++SS  P  L  Y   +GF
Sbjct:    81 CDYVALLFYASWCPFSRSFRPSFDVISSLYSSIPHFAIKESSIKPSTLSKY-GVHGF 136

 Score = 102 (41.0 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
 Identities = 30/115 (26%), Positives = 51/115 (44%)

Query:   149 VEYFAEDESISLERTDHPWFVSSTREIIQREPYLVFAVLFLCLRVLVYIFPEVLSRLKAF 208
             V +   + +   E     W   S   ++++E YL  A++F+ LR+L  I+P ++  +K  
Sbjct:   183 VPHLGNENNTEPENCPFTW-ARSPENMLRQETYLALAIVFVLLRLLHLIYPTLVVFMKFT 241

Query:   209 WVSYVPHLNLE-IFGETSQLFGRALHMVDVRRVLTKLRICKTRNFREGAKNARVW 262
             W     ++ LE +   T     RA+ +   RR           N + GA NAR W
Sbjct:   242 WRRIAQNMRLESLLEHTVGFLSRAVQLCMHRR----------SNLQGGAMNARAW 286


>TAIR|locus:2138733 [details] [associations]
            symbol:APRL6 "APR-like 6" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0045454 "cell redox homeostasis" evidence=IEA]
            InterPro:IPR013766 Pfam:PF00085 PROSITE:PS00194 GO:GO:0016021
            EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:3.40.30.10
            InterPro:IPR012336 SUPFAM:SSF52833 EMBL:AL161513 GO:GO:0045454
            PROSITE:PS51352 HOGENOM:HOG000239500 EMBL:AF128396 EMBL:BX826634
            EMBL:AK227730 IPI:IPI00786148 PIR:A85090 RefSeq:NP_192632.2
            UniGene:At.33721 ProteinModelPortal:Q9ZPE9 SMR:Q9ZPE9
            EnsemblPlants:AT4G08930.1 GeneID:826471 KEGG:ath:AT4G08930
            TAIR:At4g08930 InParanoid:Q0WT33 OMA:DKSALHR PhylomeDB:Q9ZPE9
            Genevestigator:Q9ZPE9 Uniprot:Q9ZPE9
        Length = 295

 Score = 148 (57.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
 Identities = 38/126 (30%), Positives = 67/126 (53%)

Query:    12 IFIFSVILSIRLVSSA---SLCPQDSVV-FLNNLQSQCPPGISPNPPFEVDGE--FLDRA 65
             + +  V+L + L ++     +CP++S   ++   + +        P F  +G+  +L  A
Sbjct:     8 LLLVVVVLFVNLTNATVRVQICPRESAKDYILGFRDK---SALHRPGFVTEGDDRWLQMA 64

Query:    66 ---LTSKQRNAYTSVLFYASWCPFSRDVRPTFEALSSMFPQMEHYTIEQSSALPRYLLTY 122
                +  K +  Y ++LFYASWCPFSR VRP+F+ +S ++  + H+ IE+SS     L  Y
Sbjct:    65 ADMVDKKNKCDYAALLFYASWCPFSRLVRPSFDLMSLLYSSVPHFAIEESSVKASTLSKY 124

Query:   123 FQYNGF 128
                +GF
Sbjct:   125 -GVHGF 129

 Score = 93 (37.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
 Identities = 31/102 (30%), Positives = 46/102 (45%)

Query:   161 ERTDHPWFVSSTREIIQREPYLVFAVLFLCLRVLVYIFPEVLSRLKAFWVSYVPHLNLEI 220
             E    PW   S   ++++E YL  A +F+ LR+L  I P ++  +K  W   V ++ L  
Sbjct:   184 ENCPFPWARRSPENLLRQETYLTLATVFVLLRLLHLISPTMVVFVKFTW-GRVSNMRL-- 240

Query:   221 FGETSQLFGRALHMVDVRRVLTKLRICKTRNFREGAKNARVW 262
                     G  L    V   L +   C + N +EGA NAR W
Sbjct:   241 --------GNPLEHT-VTMYLKEP--CMSSNLQEGAMNARAW 271


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.140   0.438    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      281       252   0.00082  114 3  11 22  0.50    32
                                                     32  0.47    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  197 KB (2112 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.91u 0.15s 22.06t   Elapsed:  00:00:01
  Total cpu time:  21.91u 0.15s 22.06t   Elapsed:  00:00:01
  Start:  Sat May 11 04:06:33 2013   End:  Sat May 11 04:06:34 2013

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