BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046265
(639 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 159/348 (45%), Gaps = 44/348 (12%)
Query: 14 ESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPRE 73
++N IPP + N S L L + N LSG IP + L+ L+ L + +N L G +P+E
Sbjct: 399 QNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQE 458
Query: 74 VGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQLSG 133
+ + +L+ L+L N L+G +PS N NL + LS N+L+G
Sbjct: 459 LMYVKTLETLILDFNDLTGEIPSGLSNCTNLN-----------------WISLSNNRLTG 501
Query: 134 SIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSISNLSN- 192
IP ++G L NLA+L L +NS G+IP LG + +P ++ S
Sbjct: 502 EIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 561
Query: 193 -----LEG---LYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQ 244
+ G +Y+ + + E L+E + G + L ++ N ++
Sbjct: 562 IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQ-------GIRSEQLNRLSTRNPCNITS 614
Query: 245 NHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLN 304
G+ F ++ FLD+S N G IP +IG + L L+ N
Sbjct: 615 RVYGGHTSPTFDNNGSMMFLDMSYNMLSG-----------YIPKEIGSMPYLFILNLGHN 663
Query: 305 HIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTN 352
I G +P E+G+L+ LN L+ NK+ G +P+ + +++ L +DLS N
Sbjct: 664 DISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 711
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 161/383 (42%), Gaps = 69/383 (18%)
Query: 31 NLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGL 90
NL+FLD+ +N S IP D + L+HL I+ NKL G R + + LK L + N
Sbjct: 198 NLEFLDVSSNNFSTGIPFLGD-CSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 256
Query: 91 SGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQLSGSIPHFL-GHLSNLAVLH 149
G +P L + S+ +L L+EN+ +G IP FL G L L
Sbjct: 257 VGPIPP-------LPLKSLQ------------YLSLAENKFTGEIPDFLSGACDTLTGLD 297
Query: 150 LGDNSLFGSIPPILG-------------------------KVQXXXXXXXXXXXXXXVLP 184
L N +G++PP G K++ LP
Sbjct: 298 LSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELP 357
Query: 185 PSISNLS-NLEGLYLYSSLVSAEI-GNLLQ-----LIELEIDNKQLFGQIPKSLRNFTSL 237
S++NLS +L L L S+ S I NL Q L EL + N G+IP +L N + L
Sbjct: 358 ESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL 417
Query: 238 NIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYG-------------SLNFSMNNITR 284
+HL N+L+G I G L L L N G +L N++T
Sbjct: 418 VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 477
Query: 285 SIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDL 344
IP + L+ + S N + GE+P +G L++L L+ N G++P LG L
Sbjct: 478 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 537
Query: 345 EYLDLSTNYNNEFRKEFPVELEK 367
+LDL+TN F P + K
Sbjct: 538 IWLDLNTNL---FNGTIPAAMFK 557
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 179/444 (40%), Gaps = 91/444 (20%)
Query: 2 SCLAFFFFQVVHESNTLFAIIPPQIGN---ISNLKFLDMGNNQLSG--VIPQEI-DPLTH 55
SC F V SNTL P ++ +++L+ LD+ N +SG V+ + D
Sbjct: 121 SCSGLKFLNV--SSNTL--DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGE 176
Query: 56 LKHLYINVNKLRGSVPRE---------------------VGQLSSLKQLVLYCNGLSGWL 94
LKHL I+ NK+ G V +G S+L+ L + N LSG
Sbjct: 177 LKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDF 236
Query: 95 PSSFGNLNNLA---------IGSMPXXXXXXXXXXXFHLDLSENQLSGSIPHFL-GHLSN 144
+ L +G +P +L L+EN+ +G IP FL G
Sbjct: 237 SRAISTCTELKLLNISSNQFVGPIPPLPLKSLQ----YLSLAENKFTGEIPDFLSGACDT 292
Query: 145 LAVLHLGDNSLFGSIPPILG-------------------------KVQXXXXXXXXXXXX 179
L L L N +G++PP G K++
Sbjct: 293 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 352
Query: 180 XXVLPPSISNLS-NLEGLYLYSSLVSAEI-GNLLQ-----LIELEIDNKQLFGQIPKSLR 232
LP S++NLS +L L L S+ S I NL Q L EL + N G+IP +L
Sbjct: 353 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 412
Query: 233 NFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGK 292
N + L +HL N+L+G I G L L L N G IP ++
Sbjct: 413 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG-----------EIPQELMY 461
Query: 293 LYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTN 352
+ L L N + GE+P L N +LN+ +L+ N++ G +P+ +G + +L L LS
Sbjct: 462 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS-- 519
Query: 353 YNNEFRKEFPVELEKLVQLTELDL 376
NN F P EL L LDL
Sbjct: 520 -NNSFSGNIPAELGDCRSLIWLDL 542
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 184/496 (37%), Gaps = 96/496 (19%)
Query: 26 IGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQLSSLKQLV 84
I + LK L++ +NQ G IP PL L++L + NK G +P + G +L L
Sbjct: 240 ISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLD 297
Query: 85 LYCNGLSGWLPSSFGNL----------NNLAIGSMPXXXXXXXXXXXFHLDLSENQLSGS 134
L N G +P FG+ NN + G +P LDLS N+ SG
Sbjct: 298 LSGNHFYGAVPPFFGSCSLLESLALSSNNFS-GELPMDTLLKMRGLKV-LDLSFNEFSGE 355
Query: 135 IPHFLGHLS---------------------------NLAVLHLGDNSLFGSIPPILGKVQ 167
+P L +LS L L+L +N G IPP L
Sbjct: 356 LPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS 415
Query: 168 XXXXXXXXXXXXXXVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIE----LEIDNKQL 223
+P S+ +LS L L L+ +++ EI L ++ L +D L
Sbjct: 416 ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 475
Query: 224 FGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNIT 283
G+IP L N T+LN + L N LTG I + G NL L LS N+F G+
Sbjct: 476 TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN--------- 526
Query: 284 RSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALN--GNKVY------GSLP 335
IP ++G L LD + N G +P + K A N K Y G
Sbjct: 527 --IPAELGDCRSLIWLDLNTNLFNGTIPAAM--FKQSGKIAANFIAGKRYVYIKNDGMKK 582
Query: 336 RVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLV-------------QLTELDLVITFWE 382
G+ + LE+ + + N P + V + LD+
Sbjct: 583 ECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLS 642
Query: 383 ERYRPKSV---------------IWKAWRSLISRMHGLSCIDISYNELRGLIRNSTGIHY 427
Y PK + I + + + GL+ +D+S N+L G I +
Sbjct: 643 -GYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALT 701
Query: 428 NLVDALQGNKGLCGDV 443
L + N L G +
Sbjct: 702 MLTEIDLSNNNLSGPI 717
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 16 NTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVG 75
N L IP + N +NL ++ + NN+L+G IP+ I L +L L ++ N G++P E+G
Sbjct: 473 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG 532
Query: 76 QLSSLKQLVLYCNGLSGWLPSSF----GNL-NNLAIGSMPXXXXXXXXXXXFHLDLSENQ 130
SL L L N +G +P++ G + N G H + +
Sbjct: 533 DCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLE 592
Query: 131 LSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSISNL 190
G L LS ++ G P +P I ++
Sbjct: 593 FQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSM 652
Query: 191 SNLEGLYLYSSLVSAEI----GNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNH 246
L L L + +S I G+L L L++ + +L G+IP+++ T L + L N+
Sbjct: 653 PYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN 712
Query: 247 LTGNIYEV--FGIYPNLTFLD 265
L+G I E+ F +P FL+
Sbjct: 713 LSGPIPEMGQFETFPPAKFLN 733
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 70/171 (40%), Gaps = 27/171 (15%)
Query: 260 NLTFLDLSQNNFYGSLNF------------SMNNITRSIPPKIGKLYQLHKLDFSLNHIV 307
NL FLD+S NNF + F S N ++ I +L L+ S N V
Sbjct: 198 NLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFV 257
Query: 308 GELPIELGNLKSLNYRALNGNKVYGSLPRVL-GSISDLEYLDLSTNYNNEFRKEFPVELE 366
G PI LKSL Y +L NK G +P L G+ L LDLS N+ F P
Sbjct: 258 G--PIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNH---FYGAVPPFFG 312
Query: 367 KLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRG 417
L L L + +++ +M GL +D+S+NE G
Sbjct: 313 SCSLLESLALSSNNFSGELPMDTLL---------KMRGLKVLDLSFNEFSG 354
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 159/348 (45%), Gaps = 44/348 (12%)
Query: 14 ESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPRE 73
++N IPP + N S L L + N LSG IP + L+ L+ L + +N L G +P+E
Sbjct: 402 QNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQE 461
Query: 74 VGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQLSG 133
+ + +L+ L+L N L+G +PS N NL + LS N+L+G
Sbjct: 462 LMYVKTLETLILDFNDLTGEIPSGLSNCTNLN-----------------WISLSNNRLTG 504
Query: 134 SIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSISNLSN- 192
IP ++G L NLA+L L +NS G+IP LG + +P ++ S
Sbjct: 505 EIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 564
Query: 193 -----LEG---LYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQ 244
+ G +Y+ + + E L+E + G + L ++ N ++
Sbjct: 565 IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQ-------GIRSEQLNRLSTRNPCNITS 617
Query: 245 NHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLN 304
G+ F ++ FLD+S N G IP +IG + L L+ N
Sbjct: 618 RVYGGHTSPTFDNNGSMMFLDMSYNMLSG-----------YIPKEIGSMPYLFILNLGHN 666
Query: 305 HIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTN 352
I G +P E+G+L+ LN L+ NK+ G +P+ + +++ L +DLS N
Sbjct: 667 DISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 714
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 161/383 (42%), Gaps = 69/383 (18%)
Query: 31 NLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGL 90
NL+FLD+ +N S IP D + L+HL I+ NKL G R + + LK L + N
Sbjct: 201 NLEFLDVSSNNFSTGIPFLGD-CSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 259
Query: 91 SGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQLSGSIPHFL-GHLSNLAVLH 149
G +P L + S+ +L L+EN+ +G IP FL G L L
Sbjct: 260 VGPIPP-------LPLKSLQ------------YLSLAENKFTGEIPDFLSGACDTLTGLD 300
Query: 150 LGDNSLFGSIPPILG-------------------------KVQXXXXXXXXXXXXXXVLP 184
L N +G++PP G K++ LP
Sbjct: 301 LSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELP 360
Query: 185 PSISNLS-NLEGLYLYSSLVSAEI-GNLLQ-----LIELEIDNKQLFGQIPKSLRNFTSL 237
S++NLS +L L L S+ S I NL Q L EL + N G+IP +L N + L
Sbjct: 361 ESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL 420
Query: 238 NIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYG-------------SLNFSMNNITR 284
+HL N+L+G I G L L L N G +L N++T
Sbjct: 421 VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480
Query: 285 SIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDL 344
IP + L+ + S N + GE+P +G L++L L+ N G++P LG L
Sbjct: 481 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 540
Query: 345 EYLDLSTNYNNEFRKEFPVELEK 367
+LDL+TN F P + K
Sbjct: 541 IWLDLNTNL---FNGTIPAAMFK 560
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 179/444 (40%), Gaps = 91/444 (20%)
Query: 2 SCLAFFFFQVVHESNTLFAIIPPQIGN---ISNLKFLDMGNNQLSG--VIPQEI-DPLTH 55
SC F V SNTL P ++ +++L+ LD+ N +SG V+ + D
Sbjct: 124 SCSGLKFLNV--SSNTL--DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGE 179
Query: 56 LKHLYINVNKLRGSVPRE---------------------VGQLSSLKQLVLYCNGLSGWL 94
LKHL I+ NK+ G V +G S+L+ L + N LSG
Sbjct: 180 LKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDF 239
Query: 95 PSSFGNLNNLA---------IGSMPXXXXXXXXXXXFHLDLSENQLSGSIPHFL-GHLSN 144
+ L +G +P +L L+EN+ +G IP FL G
Sbjct: 240 SRAISTCTELKLLNISSNQFVGPIPPLPLKSLQ----YLSLAENKFTGEIPDFLSGACDT 295
Query: 145 LAVLHLGDNSLFGSIPPILG-------------------------KVQXXXXXXXXXXXX 179
L L L N +G++PP G K++
Sbjct: 296 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355
Query: 180 XXVLPPSISNLS-NLEGLYLYSSLVSAEI-GNLLQ-----LIELEIDNKQLFGQIPKSLR 232
LP S++NLS +L L L S+ S I NL Q L EL + N G+IP +L
Sbjct: 356 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 415
Query: 233 NFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGK 292
N + L +HL N+L+G I G L L L N G IP ++
Sbjct: 416 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG-----------EIPQELMY 464
Query: 293 LYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTN 352
+ L L N + GE+P L N +LN+ +L+ N++ G +P+ +G + +L L LS
Sbjct: 465 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS-- 522
Query: 353 YNNEFRKEFPVELEKLVQLTELDL 376
NN F P EL L LDL
Sbjct: 523 -NNSFSGNIPAELGDCRSLIWLDL 545
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 184/496 (37%), Gaps = 96/496 (19%)
Query: 26 IGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQLSSLKQLV 84
I + LK L++ +NQ G IP PL L++L + NK G +P + G +L L
Sbjct: 243 ISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLD 300
Query: 85 LYCNGLSGWLPSSFGNL----------NNLAIGSMPXXXXXXXXXXXFHLDLSENQLSGS 134
L N G +P FG+ NN + G +P LDLS N+ SG
Sbjct: 301 LSGNHFYGAVPPFFGSCSLLESLALSSNNFS-GELPMDTLLKMRGLKV-LDLSFNEFSGE 358
Query: 135 IPHFLGHLS---------------------------NLAVLHLGDNSLFGSIPPILGKVQ 167
+P L +LS L L+L +N G IPP L
Sbjct: 359 LPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS 418
Query: 168 XXXXXXXXXXXXXXVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIE----LEIDNKQL 223
+P S+ +LS L L L+ +++ EI L ++ L +D L
Sbjct: 419 ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 478
Query: 224 FGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNIT 283
G+IP L N T+LN + L N LTG I + G NL L LS N+F G+
Sbjct: 479 TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN--------- 529
Query: 284 RSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALN--GNKVY------GSLP 335
IP ++G L LD + N G +P + K A N K Y G
Sbjct: 530 --IPAELGDCRSLIWLDLNTNLFNGTIPAAM--FKQSGKIAANFIAGKRYVYIKNDGMKK 585
Query: 336 RVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLV-------------QLTELDLVITFWE 382
G+ + LE+ + + N P + V + LD+
Sbjct: 586 ECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLS 645
Query: 383 ERYRPKSV---------------IWKAWRSLISRMHGLSCIDISYNELRGLIRNSTGIHY 427
Y PK + I + + + GL+ +D+S N+L G I +
Sbjct: 646 -GYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALT 704
Query: 428 NLVDALQGNKGLCGDV 443
L + N L G +
Sbjct: 705 MLTEIDLSNNNLSGPI 720
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 16 NTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVG 75
N L IP + N +NL ++ + NN+L+G IP+ I L +L L ++ N G++P E+G
Sbjct: 476 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG 535
Query: 76 QLSSLKQLVLYCNGLSGWLPSSF----GNL-NNLAIGSMPXXXXXXXXXXXFHLDLSENQ 130
SL L L N +G +P++ G + N G H + +
Sbjct: 536 DCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLE 595
Query: 131 LSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSISNL 190
G L LS ++ G P +P I ++
Sbjct: 596 FQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSM 655
Query: 191 SNLEGLYLYSSLVSAEI----GNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNH 246
L L L + +S I G+L L L++ + +L G+IP+++ T L + L N+
Sbjct: 656 PYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN 715
Query: 247 LTGNIYEV--FGIYPNLTFLD 265
L+G I E+ F +P FL+
Sbjct: 716 LSGPIPEMGQFETFPPAKFLN 736
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 70/171 (40%), Gaps = 27/171 (15%)
Query: 260 NLTFLDLSQNNFYGSLNF------------SMNNITRSIPPKIGKLYQLHKLDFSLNHIV 307
NL FLD+S NNF + F S N ++ I +L L+ S N V
Sbjct: 201 NLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFV 260
Query: 308 GELPIELGNLKSLNYRALNGNKVYGSLPRVL-GSISDLEYLDLSTNYNNEFRKEFPVELE 366
G PI LKSL Y +L NK G +P L G+ L LDLS N+ F P
Sbjct: 261 G--PIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNH---FYGAVPPFFG 315
Query: 367 KLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRG 417
L L L + +++ +M GL +D+S+NE G
Sbjct: 316 SCSLLESLALSSNNFSGELPMDTLL---------KMRGLKVLDLSFNEFSG 357
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 12/221 (5%)
Query: 420 RNSTGIHYNLVDALQGNKGLCGDVKLFSILTFEGKILYEEVIRATNNFDAKYCIGTAGQA 479
R H+ V A + + G +K FS+ E+ A++NF K +G G
Sbjct: 2 RKKPQDHFFDVPAEEDPEVHLGQLKRFSL---------RELQVASDNFSNKNILGRGGFG 52
Query: 480 SVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSF 539
VYK L +VAVK+ Q F E++ ++ HRN+++ GF P +
Sbjct: 53 KVYKGRLADGTLVAVKRLKEERXQGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERL 111
Query: 540 LLYEYLGRGSLAIILSND-AAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSK 598
L+Y Y+ GS+A L + W R + A L+Y+H P I+HRD+ +
Sbjct: 112 LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAA 171
Query: 599 NVLLGLDYDAHVSDFGISKFLK-PDSSNWSEFVGTFGYVAP 638
N+LL +++A V DFG++K + D GT G++AP
Sbjct: 172 NILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAP 212
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 441 GDVKLFSILTFEGKILYEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSP 500
G +K FS+ E+ A++NF K +G G VYK L +VAVK+
Sbjct: 15 GQLKRFSL---------RELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEE 65
Query: 501 HPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSND-AA 559
Q F E++ ++ HRN+++ GF P + L+Y Y+ GS+A L +
Sbjct: 66 RTQGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPES 124
Query: 560 IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619
W R + A L+Y+H P I+HRD+ + N+LL +++A V DFG++K +
Sbjct: 125 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
Query: 620 K-PDSSNWSEFVGTFGYVAP 638
D G G++AP
Sbjct: 185 DYKDXHVXXAVRGXIGHIAP 204
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 16/191 (8%)
Query: 459 EVIRATNNFDAKYC------IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQ---QA 509
E+ TNNFD + +G G VYK + + VAVKK + D+ + Q
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKL-AAMVDITTEELKQQ 76
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM 569
F EIK + + +H N+V+ GFS L+Y Y+ GSL LS SW +R
Sbjct: 77 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC 136
Query: 570 NVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK--PDSSNWS 627
+ + AN ++++H ++ +HRDI S N+LL + A +SDFG+++ + + S
Sbjct: 137 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 628 EFVGTFGYVAP 638
VGT Y+AP
Sbjct: 194 RIVGTTAYMAP 204
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 95/191 (49%), Gaps = 16/191 (8%)
Query: 459 EVIRATNNFDAKYC------IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQ---QA 509
E+ TNNFD + +G G VYK + + VAVKK + D+ + Q
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKL-AAMVDITTEELKQQ 76
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM 569
F EIK + + +H N+V+ GFS L+Y Y+ GSL LS SW +R
Sbjct: 77 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC 136
Query: 570 NVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK--PDSSNWS 627
+ + AN ++++H ++ +HRDI S N+LL + A +SDFG+++ + +
Sbjct: 137 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 628 EFVGTFGYVAP 638
VGT Y+AP
Sbjct: 194 RIVGTTAYMAP 204
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 95/191 (49%), Gaps = 16/191 (8%)
Query: 459 EVIRATNNFDAKYC------IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQ---QA 509
E+ TNNFD + +G G VYK + + VAVKK + D+ + Q
Sbjct: 13 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKL-AAMVDITTEELKQQ 70
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM 569
F EIK + + +H N+V+ GFS L+Y Y+ GSL LS SW +R
Sbjct: 71 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC 130
Query: 570 NVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WS 627
+ + AN ++++H ++ +HRDI S N+LL + A +SDFG+++ + +
Sbjct: 131 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 628 EFVGTFGYVAP 638
VGT Y+AP
Sbjct: 188 RIVGTTAYMAP 198
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 16/191 (8%)
Query: 459 EVIRATNNFDAKYC------IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQ---QA 509
E+ TNNFD + G G VYK + + VAVKK + D+ + Q
Sbjct: 10 ELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT-TVAVKKL-AAMVDITTEELKQQ 67
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM 569
F EIK + +H N+V+ GFS L+Y Y GSL LS SW R
Sbjct: 68 FDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRC 127
Query: 570 NVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK--PDSSNWS 627
+ + AN ++++H ++ +HRDI S N+LL + A +SDFG+++ + S
Sbjct: 128 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS 184
Query: 628 EFVGTFGYVAP 638
VGT Y AP
Sbjct: 185 RIVGTTAYXAP 195
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 442 DVKLFSILTFEGKILYEEVIRATNNFDAKYCIGTAGQASVYKAELPSW-------EIVAV 494
D+ L F+G + +++ + + K IG +V++AE W +I+
Sbjct: 14 DIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAE---WHGSDVAVKILME 70
Query: 495 KKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL 554
+ FH+ F E+ + LRH N+V F G P ++ EYL RGSL +L
Sbjct: 71 QDFHAER-----VNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLL 125
Query: 555 SNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFG 614
A ++ R+++ VA ++Y+ H+ PPIVHRD+ S N+L+ Y V DFG
Sbjct: 126 HKSGAREQLDERRRLSMAYDVAKGMNYL-HNRNPPIVHRDLKSPNLLVDKKYTVKVCDFG 184
Query: 615 ISKFLKPDSSNWSEFVGTFGYVAP 638
+S+ GT ++AP
Sbjct: 185 LSRLKASXFLXSKXAAGTPEWMAP 208
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 442 DVKLFSILTFEGKILYEEVIRATNNFDAKYCIGTAGQASVYKAELPSW-------EIVAV 494
D+ L F+G + +++ + + K IG +V++AE W +I+
Sbjct: 14 DIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAE---WHGSDVAVKILME 70
Query: 495 KKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL 554
+ FH+ F E+ + LRH N+V F G P ++ EYL RGSL +L
Sbjct: 71 QDFHAER-----VNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLL 125
Query: 555 SNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFG 614
A ++ R+++ VA ++Y+ H+ PPIVHR++ S N+L+ Y V DFG
Sbjct: 126 HKSGAREQLDERRRLSMAYDVAKGMNYL-HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFG 184
Query: 615 ISKFLKPDSSNWSEFVGTFGYVAP 638
+S+ + GT ++AP
Sbjct: 185 LSRLKASTFLSSKSAAGTPEWMAP 208
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRH 522
ATNNFD K+ IG VYK L VA+K+ +P +++ + I+ L+ RH
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETE-IETLSFCRH 94
Query: 523 RNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL-SNDAAIDEFSWTVRMNVIKSVANTLSY 581
++V GF + L+Y+Y+ G+L L +D SW R+ + A L Y
Sbjct: 95 PHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHY 154
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKF-LKPDSSNWSEFV-GTFGYVAP 638
+H I+HRD+ S N+LL ++ ++DFGISK + D ++ V GT GY+ P
Sbjct: 155 LHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDP 210
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 16/170 (9%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKF---HSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
IG +VY A ++ + + VA+++ P ++++ NEI + E ++ N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-----NEILVMRENKNPNIVNY 82
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+ +++ EYL GSL +++ + +DE V + L ++H +
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAA---VCRECLQALEFLHSNQ-- 136
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRDI S N+LLG+D ++DFG + P+ S SE VGT ++AP
Sbjct: 137 -VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAP 185
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 87/179 (48%), Gaps = 8/179 (4%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRH 522
ATNNFD K+ IG VYK L VA+K+ +P +++ + I+ L+ RH
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETE-IETLSFCRH 94
Query: 523 RNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL-SNDAAIDEFSWTVRMNVIKSVANTLSY 581
++V GF + L+Y+Y+ G+L L +D SW R+ + A L Y
Sbjct: 95 PHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHY 154
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFV--GTFGYVAP 638
+H I+HRD+ S N+LL ++ ++DFGISK V GT GY+ P
Sbjct: 155 LHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDP 210
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 129 NQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSIS 188
N L G IP + L+ L L++ ++ G+IP L +++ LPPSIS
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 189 NLSNLEGLYLYSSLVSAEI----GNLLQL-IELEIDNKQLFGQIPKSLRNFTSLNIVHLE 243
+L NL G+ + +S I G+ +L + I +L G+IP + N +L V L
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLS 205
Query: 244 QNHLTGNIYEVFGIYPNLTFLDLSQNNF------------YGSLNFSMNNITRSIPPKIG 291
+N L G+ +FG N + L++N+ L+ N I ++P +
Sbjct: 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLT 265
Query: 292 KLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLP 335
+L LH L+ S N++ GE+P + GNL+ + A NK P
Sbjct: 266 QLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSP 308
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 44/256 (17%)
Query: 1 LSCLAFFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLY 60
L+ L + F + N L IPP I ++ L +L + + +SG IP + + L L
Sbjct: 72 LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLD 131
Query: 61 INVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPXXXXXXXXXX 120
+ N L G++P + L +L + N +SG +P S+G+ + L
Sbjct: 132 FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFT-------------- 177
Query: 121 XFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXX 180
+ +S N+L+G IP +L NLA + L N L G + G +
Sbjct: 178 --SMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDK------------- 221
Query: 181 XVLPPSISNLSNLEGLYLYSSLVSAEIGNL---LQLIELEIDNKQLFGQIPKSLRNFTSL 237
N + ++L + ++ ++G + L L++ N +++G +P+ L L
Sbjct: 222 -----------NTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFL 270
Query: 238 NIVHLEQNHLTGNIYE 253
+ +++ N+L G I +
Sbjct: 271 HSLNVSFNNLCGEIPQ 286
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 103/263 (39%), Gaps = 53/263 (20%)
Query: 183 LPPSISNLSNLEGLYLYSSLVSAEIGNLLQ----LIELEIDNKQLFGQIPKSLRNFTSLN 238
+PP+I+ L+ L LY+ + VS I + L L+ L+ L G +P S+ + +L
Sbjct: 93 IPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLV 152
Query: 239 IVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHK 298
+ + N ++G I + +G + L + S+ S N +T IPP L L
Sbjct: 153 GITFDGNRISGAIPDSYGSFSKL----------FTSMTISRNRLTGKIPPTFANL-NLAF 201
Query: 299 LDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFR 358
+D S N + G+ + G+ K+ L N + L +V G +L LDL NN
Sbjct: 202 VDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKV-GLSKNLNGLDLR---NNRIY 257
Query: 359 KEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRGL 418
P L +L L L+ +S+N L G
Sbjct: 258 GTLPQGLTQLKFLHSLN----------------------------------VSFNNLCGE 283
Query: 419 IRNSTGIHYNLVDALQGNKGLCG 441
I + V A NK LCG
Sbjct: 284 IPQGGNLQRFDVSAYANNKCLCG 306
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 18/120 (15%)
Query: 303 LNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFP 362
+N++VG +P + L L+Y + V G++P L I L LD S N P
Sbjct: 86 INNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSY---NALSGTLP 142
Query: 363 VELEKLVQLTELDLVITFWEERYR---PKSVIWKAWRSLISRMHGLSCIDISYNELRGLI 419
+ L L ITF R P S + ++ L + M IS N L G I
Sbjct: 143 PSISSLPNLVG----ITFDGNRISGAIPDS--YGSFSKLFTSMT------ISRNRLTGKI 190
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 16/170 (9%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKF---HSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
IG +VY A ++ + + VA+++ P ++++ NEI + E ++ N+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-----NEILVMRENKNPNIVNY 83
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+ +++ EYL GSL +++ + +DE V + L ++H +
Sbjct: 84 LDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAA---VCRECLQALEFLHSNQ-- 137
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRDI S N+LLG+D ++DFG + P+ S S VGT ++AP
Sbjct: 138 -VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 186
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 16/170 (9%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKF---HSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
IG +VY A ++ + + VA+++ P ++++ NEI + E ++ N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-----NEILVMRENKNPNIVNY 82
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+ +++ EYL GSL +++ + +DE V + L ++H +
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAA---VCRECLQALEFLHSNQ-- 136
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRDI S N+LLG+D ++DFG + P+ S S VGT ++AP
Sbjct: 137 -VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 16/170 (9%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKF---HSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
IG +VY A ++ + + VA+++ P ++++ NEI + E ++ N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-----NEILVMRENKNPNIVNY 82
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+ +++ EYL GSL +++ + +DE V + L ++H +
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAA---VCRECLQALEFLHSNQ-- 136
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRDI S N+LLG+D ++DFG + P+ S S VGT ++AP
Sbjct: 137 -VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 185
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 16/170 (9%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKF---HSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
IG +VY A ++ + + VA+++ P ++++ NEI + E ++ N+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-----NEILVMRENKNPNIVNY 83
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+ +++ EYL GSL +++ + +DE V + L ++H +
Sbjct: 84 LDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAA---VCRECLQALEFLHSNQ-- 137
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HR+I S N+LLG+D ++DFG + P+ S S VGT ++AP
Sbjct: 138 -VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 186
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 21/151 (13%)
Query: 503 DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL-AIILSNDAAID 561
D Q+ F E+K + L H NV+KF G + ++ + EY+ G+L II S D+
Sbjct: 47 DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS--- 103
Query: 562 EFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL-- 619
++ W+ R++ K +A+ ++Y+H I+HRD++S N L+ + + V+DFG+++ +
Sbjct: 104 QYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160
Query: 620 ------------KPDSSNWSEFVGTFGYVAP 638
KPD VG ++AP
Sbjct: 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY RG + L + DE I +AN LS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANALS 127
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 128 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 180
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS +E GT Y+ P
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPP 175
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 10/176 (5%)
Query: 465 NNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTELRH 522
+FD +G +VY A E S I+A+K F + V+ E++ + LRH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 523 RNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYM 582
N+++ YG+ + +L+ EY G++ L + DE I +AN LSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALSYC 128
Query: 583 HHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRDI +N+LLG + + ++DFG S + SS + GT Y+ P
Sbjct: 129 HSKR---VIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 179
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY RG + L + DE I +AN LS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANALS 127
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS GT Y+ P
Sbjct: 128 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPP 180
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 19/187 (10%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKF----HSPHPDMVVQ-QAFSNEIKA 516
A N + + IG G V+K L +VA+K +M+ + Q F E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 517 LTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVA 576
++ L H N+VK YG +P + ++ E++ G L L + A W+V++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIA 132
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLL-GLDYD----AHVSDFGISKFLKPDSSNWSEFVG 631
+ YM + PPIVHRD+ S N+ L LD + A V+DFG+S + + S +G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS---QQSVHSVSGLLG 188
Query: 632 TFGYVAP 638
F ++AP
Sbjct: 189 NFQWMAP 195
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 465 NNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTELRH 522
+FD +G +VY A E S I+A+K F + V+ E++ + LRH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 523 RNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYM 582
N+++ YG+ + +L+ EY G++ L + DE I +AN LSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALSYC 128
Query: 583 HHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRDI +N+LLG + + ++DFG S + SS GT Y+ P
Sbjct: 129 HSKR---VIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPP 179
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS ++ GT Y+ P
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPP 175
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS ++ GT Y+ P
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPP 175
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 123
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS ++ GT Y+ P
Sbjct: 124 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPP 176
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 126 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPP 178
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 127
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS ++ GT Y+ P
Sbjct: 128 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPP 180
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 19/187 (10%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKF----HSPHPDMVVQ-QAFSNEIKA 516
A N + + IG G V+K L +VA+K +M+ + Q F E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 517 LTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVA 576
++ L H N+VK YG +P + ++ E++ G L L + A W+V++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIA 132
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLL-GLDYD----AHVSDFGISKFLKPDSSNWSEFVG 631
+ YM + PPIVHRD+ S N+ L LD + A V+DFG S + + S +G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS---QQSVHSVSGLLG 188
Query: 632 TFGYVAP 638
F ++AP
Sbjct: 189 NFQWMAP 195
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPP 175
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 121
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 122 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 174
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 126
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 127 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 179
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 126 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 178
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 148
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 149 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPP 201
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 449 LTFEGKILYEEVIRATNNFDAKYCIGTAGQAS---VYKAELPSWEIVAVKKFHSPHPDMV 505
L F+ YE V R N D IG G + VYKA+ ++A K +
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 506 VQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL-AIILSNDAAIDEFS 564
++ + EI L H N+VK ++ ++L E+ G++ A++L + + E
Sbjct: 78 LED-YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQ 136
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
V V K + L+Y+H + I+HRD+ + N+L LD D ++DFG+S
Sbjct: 137 IQV---VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQ 190
Query: 625 NWSEFVGTFGYVAP 638
F+GT ++AP
Sbjct: 191 RRDSFIGTPYWMAP 204
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 449 LTFEGKILYEEVIRATNNFDAKYCIGTAGQAS---VYKAELPSWEIVAVKKFHSPHPDMV 505
L F+ YE V R N D IG G + VYKA+ ++A K +
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 506 VQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL-AIILSNDAAIDEFS 564
++ + EI L H N+VK ++ ++L E+ G++ A++L + + E
Sbjct: 78 LED-YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQ 136
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
V V K + L+Y+H + I+HRD+ + N+L LD D ++DFG+S
Sbjct: 137 IQV---VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 190
Query: 625 NWSEFVGTFGYVAP 638
F+GT ++AP
Sbjct: 191 RRDSFIGTPYWMAP 204
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPP 175
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 126 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 178
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 175
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 126 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPP 178
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 127
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 128 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 180
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 139
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 140 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 192
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 449 LTFEGKILYEEVIRATNNFDAKYCIGTAGQAS---VYKAELPSWEIVAVKKFHSPHPDMV 505
L F+ YE V R N D IG G + VYKA+ ++A K +
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 506 VQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL-AIILSNDAAIDEFS 564
++ + EI L H N+VK ++ ++L E+ G++ A++L + + E
Sbjct: 78 LED-YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQ 136
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
V V K + L+Y+H + I+HRD+ + N+L LD D ++DFG+S
Sbjct: 137 IQV---VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQ 190
Query: 625 NWSEFVGTFGYVAP 638
F+GT ++AP
Sbjct: 191 RRDXFIGTPYWMAP 204
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 148
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 149 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 201
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 127
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 128 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 180
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKK--FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A + + K F + V+ E++ + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 119
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 120 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 172
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 92/175 (52%), Gaps = 25/175 (14%)
Query: 479 ASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNE--IKALTELRHRNVVKFYGFSFHPR 536
V+KA+L + E VAVK F P D +Q++ NE + +L ++H N+++F G
Sbjct: 38 GCVWKAQLLN-EYVAVKIF--PIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91
Query: 537 QS----FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD------- 585
+L+ + +GSL+ L + SW ++ +++A L+Y+H D
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGIS-KFLKPDSSNWSEF-VGTFGYVAP 638
+ P I HRDI SKNVLL + A ++DFG++ KF S+ + VGT Y+AP
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS GT Y+ P
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPP 175
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS + GT Y+ P
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPP 175
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS GT Y+ P
Sbjct: 126 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPP 178
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 123
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS GT Y+ P
Sbjct: 124 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPP 176
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 124
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S + SS GT Y+ P
Sbjct: 125 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPP 177
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Query: 467 FDAKYCIGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNV 525
FD +G SVYKA + +IVA+K+ P Q EI + + +V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV----PVESDLQEIIKEISIMQQCDSPHV 86
Query: 526 VKFYGFSFHPRQSFLLYEYLGRGSLAIIL---SNDAAIDEFSWTVRMNVIKSVANTLSYM 582
VK+YG F +++ EY G GS++ I+ + DE + +++S L Y+
Sbjct: 87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIA-----TILQSTLKGLEYL 141
Query: 583 HHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H F +HRDI + N+LL + A ++DFG++ L + + +GT ++AP
Sbjct: 142 H---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAP 194
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 19/187 (10%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKF----HSPHPDMVVQ-QAFSNEIKA 516
A N + + IG G V+K L +VA+K +M+ + Q F E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 517 LTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVA 576
++ L H N+VK YG +P + ++ E++ G L L + A W+V++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIA 132
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLL-GLDYD----AHVSDFGISKFLKPDSSNWSEFVG 631
+ YM + PPIVHRD+ S N+ L LD + A V+DF +S + + S +G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS---QQSVHSVSGLLG 188
Query: 632 TFGYVAP 638
F ++AP
Sbjct: 189 NFQWMAP 195
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 123
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + ++DFG S SS + GT Y+ P
Sbjct: 124 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPP 176
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQ-ASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIK 515
YE V R N D IG G VYKA+ ++A K + ++ + EI
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELED-YMVEID 59
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL-AIILSNDAAIDEFSWTVRMNVIKS 574
L H N+VK ++ ++L E+ G++ A++L + + E V V K
Sbjct: 60 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV---VCKQ 116
Query: 575 VANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGIS-KFLKPDSSNWSEFVGTF 633
+ L+Y+H + I+HRD+ + N+L LD D ++DFG+S K + F+GT
Sbjct: 117 TLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTP 173
Query: 634 GYVAP 638
++AP
Sbjct: 174 YWMAP 178
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + +++FG S + SS + GT Y+ P
Sbjct: 126 YCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPP 178
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 463 ATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTEL 520
A +F+ +G +VY A E S I+A+K F + V+ E++ + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
RH N+++ YG+ + +L+ EY G++ L + DE I +AN LS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 124
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y H ++HRDI +N+LLG + +++FG S + SS + GT Y+ P
Sbjct: 125 YCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPP 177
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 473 IGTAGQASVYKAELPSWE-IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ +VYK + W VAVK + P QAF NE+ L + RH N++ F G+
Sbjct: 32 IGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 532 SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIV 591
S P Q ++ ++ SL L A+ +F +++ + A + Y+H I+
Sbjct: 89 STKP-QLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLH---AKSII 142
Query: 592 HRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGYVAP 638
HRD+ S N+ L D + DFG L + S WS + G+ ++AP
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFG----LATEKSRWSGSHQFEQLSGSILWMAP 191
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
++++ + IG+ A V A P E VA+K+ + + + EI+A+++ H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELL-KEIQAMSQCHHP 68
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDE-----FSWTVRMNVIKSVANT 578
N+V +Y + +L+ + L GS+ I+ + A E + +++ V
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 579 LSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK-----PDSSNWSEFVGTF 633
L Y+H + +HRD+ + N+LLG D ++DFG+S FL + FVGT
Sbjct: 129 LEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 634 GYVAP 638
++AP
Sbjct: 186 CWMAP 190
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
++++ + IG+ A V A P E VA+K+ + + + EI+A+++ H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELL-KEIQAMSQCHHP 73
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDE-----FSWTVRMNVIKSVANT 578
N+V +Y + +L+ + L GS+ I+ + A E + +++ V
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 579 LSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK-----PDSSNWSEFVGTF 633
L Y+H + +HRD+ + N+LLG D ++DFG+S FL + FVGT
Sbjct: 134 LEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 634 GYVAP 638
++AP
Sbjct: 191 CWMAP 195
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 473 IGTAGQASVYKAELPSWE-IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ +VYK + W VAVK + P QAF NE+ L + RH N++ F G+
Sbjct: 32 IGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 532 SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIV 591
S P Q ++ ++ SL L A+ +F +++ + A + Y+H I+
Sbjct: 89 STAP-QLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLH---AKSII 142
Query: 592 HRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGYVAP 638
HRD+ S N+ L D + DFG L + S WS + G+ ++AP
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFG----LATEKSRWSGSHQFEQLSGSILWMAP 191
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 12/177 (6%)
Query: 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKK--FHSPHPDMVVQQAFSNEIKALTELRH 522
++FD +G +VY A + + K F S V+ EI+ + LRH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 523 RNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
N+++ Y + FH R+ +L+ E+ RG L L DE ++ +A+ L Y
Sbjct: 75 PNILRMYNY-FHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHY 130
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRDI +N+L+G + ++DFG S + S GT Y+ P
Sbjct: 131 CHERK---VIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPP 182
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 18/140 (12%)
Query: 491 IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
+VAVK P + ++ F E + LT L+H ++VKFYG +++EY+ G L
Sbjct: 47 LVAVKALKDP--TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDL 104
Query: 551 ----------AIILSND---AAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISS 597
A+IL + A E + +++ +A+ + Y+ +F VHRD+++
Sbjct: 105 NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHF---VHRDLAT 161
Query: 598 KNVLLGLDYDAHVSDFGISK 617
+N L+G + + DFG+S+
Sbjct: 162 RNCLVGANLLVKIGDFGMSR 181
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 12/177 (6%)
Query: 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKK--FHSPHPDMVVQQAFSNEIKALTELRH 522
++FD +G +VY A + + K F S V+ EI+ + LRH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 523 RNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
N+++ Y + FH R+ +L+ E+ RG L L DE ++ +A+ L Y
Sbjct: 74 PNILRMYNY-FHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHY 129
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRDI +N+L+G + ++DFG S + S GT Y+ P
Sbjct: 130 CHERK---VIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPP 181
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 473 IGTAGQASVYKAELPSWE-IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ +VYK + W VAVK + P QAF NE+ L + RH N++ F G+
Sbjct: 20 IGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 532 SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIV 591
S P Q ++ ++ SL L A+ +F +++ + A + Y+H I+
Sbjct: 77 STKP-QLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLH---AKSII 130
Query: 592 HRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGYVAP 638
HRD+ S N+ L D + DFG++ S WS + G+ ++AP
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAP 179
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 12/177 (6%)
Query: 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKK--FHSPHPDMVVQQAFSNEIKALTELRH 522
++FD +G +VY A + + K F S V+ EI+ + LRH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 523 RNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
N+++ Y + FH R+ +L+ E+ RG L L DE ++ +A+ L Y
Sbjct: 74 PNILRMYNY-FHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHY 129
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRDI +N+L+G + ++DFG S + S GT Y+ P
Sbjct: 130 CHERK---VIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPP 181
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 512 NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNV 571
EI L++ V K+YG + +++ EYLG GS A+ L DEF +
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGS-ALDLLRAGPFDEFQIAT---M 125
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVG 631
+K + L Y+H + +HRDI + NVLL D ++DFG++ L + FVG
Sbjct: 126 LKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVG 182
Query: 632 TFGYVAP 638
T ++AP
Sbjct: 183 TPFWMAP 189
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 70/137 (51%), Gaps = 15/137 (10%)
Query: 491 IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
+VAVK + ++ F E + LT L+H ++VKFYG +++EY+ G L
Sbjct: 45 LVAVKTLKDASDN--ARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDL 102
Query: 551 ----------AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNV 600
A++++ E + + +++ + +A + Y+ +F VHRD++++N
Sbjct: 103 NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHF---VHRDLATRNC 159
Query: 601 LLGLDYDAHVSDFGISK 617
L+G + + DFG+S+
Sbjct: 160 LVGENLLVKIGDFGMSR 176
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 473 IGTAGQASVYKAELPSWE-IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ +VYK + W VAVK + P QAF NE+ L + RH N++ F G+
Sbjct: 16 IGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 532 SFHPRQSFLLYEYLGRG---SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
S P+ + + G L II + +F +++ + A + Y+H
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHAK--- 123
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGYVAP 638
I+HRD+ S N+ L D + DFG L + S WS + G+ ++AP
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFG----LATEKSRWSGSHQFEQLSGSILWMAP 175
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 6/181 (3%)
Query: 464 TNNFDAKYCIGTAGQASVYKAELPS-WEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRH 522
+++ Y IGT K S +I+ K+ +Q +E+ L EL+H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 523 RNVVKFYGFSFHPRQS--FLLYEYLGRGSLAIILSNDAAIDEF---SWTVRMNVIKSVAN 577
N+V++Y + +++ EY G LA +++ ++ + +R+ ++A
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 578 TLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVA 637
+ D ++HRD+ NV L + + DFG+++ L D EFVGT Y++
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMS 184
Query: 638 P 638
P
Sbjct: 185 P 185
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 473 IGTAGQASVYKAELPSWE-IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ +VYK + W VAVK + P QAF NE+ L + RH N++ F G+
Sbjct: 36 IGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 532 SFHPRQSFLLYEYLGRG---SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
S P+ + + G L II + +F +++ + A + Y+H
Sbjct: 93 STKPQLAIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHAK--- 143
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGYVAP 638
I+HRD+ S N+ L D + DFG L + S WS + G+ ++AP
Sbjct: 144 SIIHRDLKSNNIFLHEDLTVKIGDFG----LATEKSRWSGSHQFEQLSGSILWMAP 195
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 473 IGTAGQASVYKAELPSWE-IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ +VYK + W VAVK + P QAF NE+ L + RH N++ F G+
Sbjct: 44 IGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 532 SFHPRQSFLLYEYLGRG---SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
S P+ + + G L II + +F +++ + A + Y+H
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLH---AK 151
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGYVAP 638
I+HRD+ S N+ L D + DFG L + S WS + G+ ++AP
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFG----LATEKSRWSGSHQFEQLSGSILWMAP 203
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 6/181 (3%)
Query: 464 TNNFDAKYCIGTAGQASVYKAELPS-WEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRH 522
+++ Y IGT K S +I+ K+ +Q +E+ L EL+H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 523 RNVVKFYGFSFHPRQS--FLLYEYLGRGSLAIILSNDAAIDEF---SWTVRMNVIKSVAN 577
N+V++Y + +++ EY G LA +++ ++ + +R+ ++A
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 578 TLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVA 637
+ D ++HRD+ NV L + + DFG+++ L D+S FVGT Y++
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMS 184
Query: 638 P 638
P
Sbjct: 185 P 185
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 6/181 (3%)
Query: 464 TNNFDAKYCIGTAGQASVYKAELPS-WEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRH 522
+++ Y IGT K S +I+ K+ +Q +E+ L EL+H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 523 RNVVKFYGFSFHPRQS--FLLYEYLGRGSLAIILSNDAAIDEF---SWTVRMNVIKSVAN 577
N+V++Y + +++ EY G LA +++ ++ + +R+ ++A
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 578 TLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVA 637
+ D ++HRD+ NV L + + DFG+++ L D+S FVGT Y++
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMS 184
Query: 638 P 638
P
Sbjct: 185 P 185
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 473 IGTAGQAS---VYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
IG G+ S V+K + +IVA+KKF D V+++ EI+ L +L+H N+V
Sbjct: 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNL 67
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVA-NTLSYMHHDYF 587
R+ L++EY L +D + V +++KS+ TL ++ +
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVL-------HELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 588 PPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+HRD+ +N+L+ + DFG ++ L S + + V T Y +P
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSP 171
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 473 IGTAGQASVYKAELPSWE-IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ +VYK + W VAVK + P QAF NE+ L + RH N++ F G+
Sbjct: 16 IGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 532 SFHPRQSFLLYEYLGRG---SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
S P+ + + G L II + +F +++ + A + Y+H
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHAK--- 123
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGYVAP 638
I+HRD+ S N+ L D + DFG++ S WS + G+ ++AP
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAP 175
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 473 IGTAGQASVYKAELPSWE-IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ +VYK + W VAVK + P QAF NE+ L + RH N++ F G+
Sbjct: 21 IGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 532 SFHPRQSFLLYEYLGRG---SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
S P+ + + G L II + +F +++ + A + Y+H
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHAK--- 128
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGYVAP 638
I+HRD+ S N+ L D + DFG++ S WS + G+ ++AP
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAP 180
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 473 IGTAGQASVYKAELPSWE-IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ +VYK + W VAVK + P QAF NE+ L + RH N++ F G+
Sbjct: 18 IGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 532 SFHPRQSFLLYEYLGRG---SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
S P+ + + G L II + +F +++ + A + Y+H
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHAK--- 125
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGYVAP 638
I+HRD+ S N+ L D + DFG++ S WS + G+ ++AP
Sbjct: 126 SIIHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAP 177
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 473 IGTAGQASVYKAELPSWE-IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ +VYK + W VAVK + P QAF NE+ L + RH N++ F G+
Sbjct: 21 IGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 532 SFHPRQSFLLYEYLGRG---SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
S P+ + + G L II + +F +++ + A + Y+H
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHAK--- 128
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGYVAP 638
I+HRD+ S N+ L D + DFG++ S WS + G+ ++AP
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAP 180
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 473 IGTAGQASVYKAELPSWE-IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ +VYK + W VAVK + P QAF NE+ L + RH N++ F G+
Sbjct: 44 IGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 532 SFHPRQSFLLYEYLGRG---SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
S P+ + + G L II + +F +++ + A + Y+H
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHAK--- 151
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGYVAP 638
I+HRD+ S N+ L D + DFG++ S WS + G+ ++AP
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAP 203
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 473 IGTAGQASVYKAELPSWE-IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ +VYK + W VAVK + P QAF NE+ L + RH N++ F G+
Sbjct: 43 IGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 532 SFHPRQSFLLYEYLGRG---SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
S P+ + + G L II + +F +++ + A + Y+H
Sbjct: 100 STKPQLAIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHAK--- 150
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGYVAP 638
I+HRD+ S N+ L D + DFG++ S WS + G+ ++AP
Sbjct: 151 SIIHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAP 202
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 473 IGTAGQASVYKAELPSWE-IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ +VYK + W VAVK + P QAF NE+ L + RH N++ F G+
Sbjct: 16 IGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 532 SFHPRQSFLLYEYLGRG---SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
S P+ + + G L II + +F +++ + A + Y+H
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMDYLHAK--- 123
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGYVAP 638
I+HRD+ S N+ L D + DFG++ S WS + G+ ++AP
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAP 175
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 512 NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN- 570
NE+ + + +H NVV+ Y + ++L E+L G+L I+S VR+N
Sbjct: 91 NEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----------VRLNE 140
Query: 571 -----VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN 625
V ++V L+Y+H ++HRDI S ++LL LD +SDFG + D
Sbjct: 141 EQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK 197
Query: 626 WSEFVGTFGYVAP 638
VGT ++AP
Sbjct: 198 RKXLVGTPYWMAP 210
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPH-PDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+GT G+ V K EL + VAVK + + V EI+ L RH +++K Y
Sbjct: 26 VGTFGKVKVGKHELTGHK-VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV 84
Query: 532 SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIV 591
P F++ EY+ G L + + +DE + + + + + Y H +V
Sbjct: 85 ISTPSDIFMVMEYVSGGELFDYICKNGRLDE---KESRRLFQQILSGVDYCHRHM---VV 138
Query: 592 HRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
HRD+ +NVLL +A ++DFG+S + D G+ Y AP
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCGSPNYAAP 184
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS 532
IG VYKA+ E A+KK D + EI L EL+H N+VK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 533 FHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVH 592
++ L++E+L + ++ + ++ + + + + N ++Y H ++H
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT---AKSFLLQLLNGIAYCHDRR---VLH 123
Query: 593 RDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
RD+ +N+L+ + + ++DFG+++ ++ V T Y AP
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAP 169
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNE--IKALTELRHRNVVKFY- 529
IG +VYK L VAVK F +Q F NE I + + H N+ +F
Sbjct: 21 IGRGRYGAVYKGSLDE-RPVAVKVF-----SFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 530 ---GFSFHPRQSFLL-YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD 585
+ R +LL EY GSL LS + W + SV L+Y+H +
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLS----LHTSDWVSSCRLAHSVTRGLAYLHTE 130
Query: 586 ------YFPPIVHRDISSKNVLLGLDYDAHVSDFGIS------KFLKP---DSSNWSEFV 630
Y P I HRD++S+NVL+ D +SDFG+S + ++P D++ SE V
Sbjct: 131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE-V 189
Query: 631 GTFGYVAP 638
GT Y+AP
Sbjct: 190 GTIRYMAP 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS 532
IG VYKA+ E A+KK D + EI L EL+H N+VK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 533 FHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVH 592
++ L++E+L + ++ + ++ + + + + N ++Y H ++H
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT---AKSFLLQLLNGIAYCHDRR---VLH 123
Query: 593 RDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
RD+ +N+L+ + + ++DFG+++ ++ V T Y AP
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAP 169
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 26/176 (14%)
Query: 479 ASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS 538
V+KA+L + + VAVK F P D Q+ EI + ++H N+++F + R S
Sbjct: 29 GCVWKAQLMN-DFVAVKIF--PLQDKQSWQS-EREIFSTPGMKHENLLQF--IAAEKRGS 82
Query: 539 ------FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD------- 585
+L+ + +GSL L + +W +V ++++ LSY+H D
Sbjct: 83 NLEVELWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHEDVPWCRGE 138
Query: 586 -YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSEFVGTFGYVAP 638
+ P I HRD SKNVLL D A ++DFG++ +P + VGT Y+AP
Sbjct: 139 GHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS 532
IG VYKA+ E A+KK D + EI L EL+H N+VK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 533 FHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVH 592
++ L++E+L + ++ + ++ + + + + N ++Y H ++H
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT---AKSFLLQLLNGIAYCHDRR---VLH 123
Query: 593 RDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
RD+ +N+L+ + + ++DFG+++ ++ + T Y AP
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAP 169
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 491 IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
IVA+KKF D +V++ EIK L +LRH N+V ++ +L++E++ L
Sbjct: 52 IVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTIL 111
Query: 551 AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH-HDYFPPIVHRDISSKNVLLGLDYDAH 609
+ +D + V + + N + + H H+ I+HRDI +N+L+
Sbjct: 112 DDLELFPNGLD---YQVVQKYLFQIINGIGFCHSHN----IIHRDIKPENILVSQSGVVK 164
Query: 610 VSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ DFG ++ L + + V T Y AP
Sbjct: 165 LCDFGFARTLAAPGEVYDDEVATRWYRAP 193
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 512 NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNV 571
EI L++ V K+YG + +++ EYLG GS A+ L +DE T +
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPGPLDE---TQIATI 129
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVG 631
++ + L Y+H + +HRDI + NVLL + ++DFG++ L + FVG
Sbjct: 130 LREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 186
Query: 632 TFGYVAP 638
T ++AP
Sbjct: 187 TPFWMAP 193
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
EI L++ V K+YG + +++ EYLG GS A+ L +DE T
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPGPLDE---TQIAT 108
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFV 630
+++ + L Y+H + +HRDI + NVLL + ++DFG++ L + FV
Sbjct: 109 ILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 165
Query: 631 GTFGYVAP 638
GT ++AP
Sbjct: 166 GTPFWMAP 173
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
EI L++ V K+YG + +++ EYLG GS A+ L +DE T
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPGPLDE---TQIAT 108
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFV 630
+++ + L Y+H + +HRDI + NVLL + ++DFG++ L + FV
Sbjct: 109 ILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV 165
Query: 631 GTFGYVAP 638
GT ++AP
Sbjct: 166 GTPFWMAP 173
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
EI L++ V K+YG + +++ EYLG GS A+ L +DE T
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPGPLDE---TQIAT 123
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFV 630
+++ + L Y+H + +HRDI + NVLL + ++DFG++ L + FV
Sbjct: 124 ILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV 180
Query: 631 GTFGYVAP 638
GT ++AP
Sbjct: 181 GTPFWMAP 188
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 10/176 (5%)
Query: 465 NNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKK-FHSPHPDMVVQQAFSNEIKALTELRH 522
++F+ +G +VY A E S IVA+K F S V+ EI+ L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 523 RNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYM 582
N+++ Y + + R+ +L+ EY RG L L DE +++ +A+ L Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTAT---IMEELADALMYC 139
Query: 583 HHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRDI +N+LLGL + ++DFG S + S GT Y+ P
Sbjct: 140 HGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPP 190
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPH-PDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+GT G+ + + +L + VAVK + + V EI+ L RH +++K Y
Sbjct: 21 VGTFGKVKIGEHQLTGHK-VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 532 SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIV 591
P F++ EY+ G L + ++E + + + + + Y H +V
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR---RLFQQILSAVDYCHRHM---VV 133
Query: 592 HRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
HRD+ +NVLL +A ++DFG+S + D + G+ Y AP
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGSPNYAAP 179
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 470 KYCIGTAGQASVYKAE----LPSWE--IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
K+ +G V+ AE LP + +VAVK +Q F E + LT L+H+
Sbjct: 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES--ARQDFQREAELLTMLQHQ 103
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSN------------DAAIDEFSWTVRMNV 571
++V+F+G R +++EY+ G L L + D A + V
Sbjct: 104 HIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
VA + Y+ +F VHRD++++N L+G + DFG+S+
Sbjct: 164 ASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 470 KYCIGTAGQASVYKAE----LPSWE--IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
K+ +G V+ AE LP + +VAVK +Q F E + LT L+H+
Sbjct: 17 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES--ARQDFQREAELLTMLQHQ 74
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSN------------DAAIDEFSWTVRMNV 571
++V+F+G R +++EY+ G L L + D A + V
Sbjct: 75 HIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
VA + Y+ +F VHRD++++N L+G + DFG+S+
Sbjct: 135 ASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Query: 492 VAVKKFHSPHPDMVVQQAFS---NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRG 548
VAVKK D+ QQ NE+ + + H NVV Y + +++ E+L G
Sbjct: 73 VAVKKM-----DLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGG 127
Query: 549 SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA 608
+L I+++ +E TV ++V+++ LSY+H+ ++HRDI S ++LL D
Sbjct: 128 ALTDIVTHTRMNEEQIATVCLSVLRA----LSYLHNQ---GVIHRDIKSDSILLTSDGRI 180
Query: 609 HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+SDFG + + VGT ++AP
Sbjct: 181 KLSDFGFCAQVSKEVPKRKXLVGTPYWMAP 210
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 470 KYCIGTAGQASVYKAE----LPSWE--IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
K+ +G V+ AE LP + +VAVK +Q F E + LT L+H+
Sbjct: 23 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES--ARQDFQREAELLTMLQHQ 80
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSN------------DAAIDEFSWTVRMNV 571
++V+F+G R +++EY+ G L L + D A + V
Sbjct: 81 HIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
VA + Y+ +F VHRD++++N L+G + DFG+S+
Sbjct: 141 ASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 449 LTFEGKILYEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQ 507
L F+G Y++ + K+ +G VY+ + + VAVK D +
Sbjct: 10 LYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEV 66
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTV 567
+ F E + E++H N+V+ G +++ E++ G+L L + E + V
Sbjct: 67 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVV 125
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
+ + +++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 126 LLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 178
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPH-PDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+GT G+ + + +L + VAVK + + V EI+ L RH +++K Y
Sbjct: 21 VGTFGKVKIGEHQLTGHK-VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 532 SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIV 591
P F++ EY+ G L + ++E + + + + + Y H +V
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR---RLFQQILSAVDYCHRHM---VV 133
Query: 592 HRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
HRD+ +NVLL +A ++DFG+S + D G+ Y AP
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSCGSPNYAAP 179
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 11/186 (5%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQAS---VYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNE 513
YE V R + + +G G + VYKA+ +A K + ++ + E
Sbjct: 8 YEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED-YIVE 66
Query: 514 IKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL-AIILSNDAAIDEFSWTVRMNVI 572
I+ L H +VK G +H + +++ E+ G++ AI+L D + E V V
Sbjct: 67 IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV---VC 123
Query: 573 KSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGT 632
+ + L+++H I+HRD+ + NVL+ L+ D ++DFG+S F+GT
Sbjct: 124 RQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGT 180
Query: 633 FGYVAP 638
++AP
Sbjct: 181 PYWMAP 186
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWT 566
QAF E +T+LRH N+V+ G + +++ EY+ +GSL L +
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGD 108
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ V + Y+ + F VHRD++++NVL+ D A VSDFG++K
Sbjct: 109 CLLKFSLDVCEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWT 566
QAF E +T+LRH N+V+ G + +++ EY+ +GSL L +
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGD 102
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ V + Y+ + F VHRD++++NVL+ D A VSDFG++K
Sbjct: 103 CLLKFSLDVCEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFGLTK 150
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 80 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGCLLKYIRKIGSFDETCTRF 136
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 137 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 193
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 194 FVGTAQYVSP 203
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWT 566
QAF E +T+LRH N+V+ G + +++ EY+ +GSL L +
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGD 117
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ V + Y+ + F VHRD++++NVL+ D A VSDFG++K
Sbjct: 118 CLLKFSLDVCEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFGLTK 165
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWT 566
QAF E +T+LRH N+V+ G + +++ EY+ +GSL L +
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGD 289
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ V + Y+ + F VHRD++++NVL+ D A VSDFG++K
Sbjct: 290 CLLKFSLDVCEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFGLTK 337
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ EYL
Sbjct: 43 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 547 RGSLAIILSNDAA-IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L A ID + + + Y+ + +HRD++++N+L+ +
Sbjct: 100 YGSLRDYLQAHAERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENE 153
Query: 606 YDAHVSDFGISKFLKPDSS 624
+ DFG++K L D
Sbjct: 154 NRVKIGDFGLTKVLPQDKE 172
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 491 IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
VA+K + + ++ F +E + + H N+++ G + +L E++ G+L
Sbjct: 46 CVAIKTLKGGYTERQ-RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 104
Query: 551 AIILS-NDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L ND +F+ + +++ +A+ + Y+ + VHRD++++N+L+ +
Sbjct: 105 DSFLRLNDG---QFTVIQLVGMLRGIASGMRYLAEMSY---VHRDLAARNILVNSNLVCK 158
Query: 610 VSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639
VSDFG+S+FL+ +SS+ +E + G PI
Sbjct: 159 VSDFGLSRFLEENSSDPTE-TSSLGGKIPI 187
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 513 EIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL-AIILSNDAAIDEFSWTVRMNV 571
EI+ L H +VK G +H + +++ E+ G++ AI+L D + E V V
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV---V 114
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVG 631
+ + L+++H I+HRD+ + NVL+ L+ D ++DFG+S F+G
Sbjct: 115 CRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIG 171
Query: 632 TFGYVAP 638
T ++AP
Sbjct: 172 TPYWMAP 178
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ EYL
Sbjct: 58 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 547 RGSLAIILS-NDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + ID + + + Y+ + +HRD++++N+L+ +
Sbjct: 115 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENE 168
Query: 606 YDAHVSDFGISKFLKPDSS 624
+ DFG++K L D
Sbjct: 169 NRVKIGDFGLTKVLPQDKE 187
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ EYL
Sbjct: 58 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 547 RGSLAIIL-SNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + ID + + + Y+ + +HRD++++N+L+ +
Sbjct: 115 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENE 168
Query: 606 YDAHVSDFGISKFLKPDSS 624
+ DFG++K L D
Sbjct: 169 NRVKIGDFGLTKVLPQDKE 187
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 491 IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP-RQSF-LLYEYLGRG 548
+VAVK+ PD Q+ F EI+ L L +VK+ G S+ P RQS L+ EYL G
Sbjct: 54 LVAVKQLQHSGPDQ--QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 549 SLAIILSNDAAIDEFSWTVRMNVIKS-VANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607
L L A + S R+ + S + + Y+ VHRD++++N+L+ +
Sbjct: 112 CLRDFLQRHRARLDAS---RLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 165
Query: 608 AHVSDFGISKFLKPD 622
++DFG++K L D
Sbjct: 166 VKIADFGLAKLLPLD 180
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 491 IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP-RQSF-LLYEYLGRG 548
+VAVK+ PD Q+ F EI+ L L +VK+ G S+ P RQS L+ EYL G
Sbjct: 42 LVAVKQLQHSGPDQ--QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 549 SLAIILSNDAAIDEFSWTVRMNVIKS-VANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607
L L A + S R+ + S + + Y+ VHRD++++N+L+ +
Sbjct: 100 CLRDFLQRHRARLDAS---RLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 153
Query: 608 AHVSDFGISKFLKPD 622
++DFG++K L D
Sbjct: 154 VKIADFGLAKLLPLD 168
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 77 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 133
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 134 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 190
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 191 FVGTAQYVSP 200
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 77 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 133
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 134 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 190
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 191 FVGTAQYVSP 200
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 491 IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP-RQSF-LLYEYLGRG 548
+VAVK+ PD Q+ F EI+ L L +VK+ G S+ P RQS L+ EYL G
Sbjct: 41 LVAVKQLQHSGPDQ--QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 549 SLAIILSNDAAIDEFSWTVRMNVIKS-VANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607
L L A + S R+ + S + + Y+ VHRD++++N+L+ +
Sbjct: 99 CLRDFLQRHRARLDAS---RLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 152
Query: 608 AHVSDFGISKFLKPD 622
++DFG++K L D
Sbjct: 153 VKIADFGLAKLLPLD 167
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
EI L++ + +++G + +++ EYLG GS A+ L ++E T
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGS-ALDLLKPGPLEE---TYIAT 120
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFV 630
+++ + L Y+H + +HRDI + NVLL D ++DFG++ L + FV
Sbjct: 121 ILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV 177
Query: 631 GTFGYVAP 638
GT ++AP
Sbjct: 178 GTPFWMAP 185
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ EYL
Sbjct: 40 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 547 RGSLAIIL-SNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + ID + + + Y+ + +HRD++++N+L+ +
Sbjct: 97 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENE 150
Query: 606 YDAHVSDFGISKFLKPDSS 624
+ DFG++K L D
Sbjct: 151 NRVKIGDFGLTKVLPQDKE 169
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
+ F E K + L H +V+ YG R F++ EY+ G L L F
Sbjct: 63 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQ 120
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+ + K V + Y+ F +HRD++++N L+ VSDFG+S+++ D
Sbjct: 121 QLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---- 173
Query: 627 SEFVGTFGYVAPI 639
E+ + G P+
Sbjct: 174 -EYTSSVGSKFPV 185
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ EYL
Sbjct: 39 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 95
Query: 547 RGSLAIIL-SNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + ID + + + Y+ + +HRD++++N+L+ +
Sbjct: 96 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENE 149
Query: 606 YDAHVSDFGISKFLKPDSS 624
+ DFG++K L D
Sbjct: 150 NRVKIGDFGLTKVLPQDKE 168
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ EYL
Sbjct: 38 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 94
Query: 547 RGSLAIIL-SNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + ID + + + Y+ + +HRD++++N+L+ +
Sbjct: 95 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENE 148
Query: 606 YDAHVSDFGISKFLKPDSS 624
+ DFG++K L D
Sbjct: 149 NRVKIGDFGLTKVLPQDKE 167
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
+ F E K + L H +V+ YG R F++ EY+ G L L F
Sbjct: 43 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQ 100
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+ + K V + Y+ F +HRD++++N L+ VSDFG+S+++ D
Sbjct: 101 QLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---- 153
Query: 627 SEFVGTFGYVAPI 639
E+ + G P+
Sbjct: 154 -EYTSSVGSKFPV 165
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 56 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 112
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 113 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 169
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 170 FVGTAQYVSP 179
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 80 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 136
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 137 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 194 FVGTAQYVSP 203
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ EYL
Sbjct: 43 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 547 RGSLAIIL-SNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + ID + + + Y+ + +HRD++++N+L+ +
Sbjct: 100 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENE 153
Query: 606 YDAHVSDFGISKFLKPDSS 624
+ DFG++K L D
Sbjct: 154 NRVKIGDFGLTKVLPQDKE 172
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ EYL
Sbjct: 40 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 547 RGSLAIIL-SNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + ID + + + Y+ + +HRD++++N+L+ +
Sbjct: 97 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENE 150
Query: 606 YDAHVSDFGISKFLKPDSS 624
+ DFG++K L D
Sbjct: 151 NRVKIGDFGLTKVLPQDKE 169
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
+ F E K + L H +V+ YG R F++ EY+ G L L F
Sbjct: 47 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQ 104
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+ + K V + Y+ F +HRD++++N L+ VSDFG+S+++ D
Sbjct: 105 QLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---- 157
Query: 627 SEFVGTFGYVAPI 639
E+ + G P+
Sbjct: 158 -EYTSSVGSKFPV 169
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 78 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 134
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 135 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 192 FVGTAQYVSP 201
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 80 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 136
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 137 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 194 FVGTAQYVSP 203
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
+ F E K + L H +V+ YG R F++ EY+ G L L F
Sbjct: 48 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQ 105
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+ + K V + Y+ F +HRD++++N L+ VSDFG+S+++ D
Sbjct: 106 QLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---- 158
Query: 627 SEFVGTFGYVAPI 639
E+ + G P+
Sbjct: 159 -EYTSSVGSKFPV 170
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 81 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 137
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 138 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 194
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 195 FVGTAQYVSP 204
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 55 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 111
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 112 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 168
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 169 FVGTAQYVSP 178
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 80 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 136
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 137 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 194 FVGTAQYVSP 203
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 78 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 134
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 135 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 192 FVGTAQYVSP 201
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ EYL
Sbjct: 71 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 127
Query: 547 RGSLAIILS-NDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + ID + + + Y+ + +HRD++++N+L+ +
Sbjct: 128 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENE 181
Query: 606 YDAHVSDFGISKFLKPDSS 624
+ DFG++K L D
Sbjct: 182 NRVKIGDFGLTKVLPQDKE 200
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 465 NNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
+ K+ +G VY+ + + VAVK D + + F E + E++H
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHP 67
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+V+ G +++ E++ G+L L + E S V + + +++ + Y+
Sbjct: 68 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 127 KKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 163
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 465 NNFDAKYCIGTAGQASVYK-AELPSWEIVAVKKFHSPHPDMVVQQAFSN----EIKALTE 519
++F+ +G V+K + PS ++A K H + ++ A N E++ L E
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH-----LEIKPAIRNQIIRELQVLHE 63
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
+V FYG + + + E++ GSL +L I E + V +V L
Sbjct: 64 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGL 120
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+Y+ + I+HRD+ N+L+ + + DFG+S L + +N EFVGT Y++P
Sbjct: 121 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRSYMSP 175
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ EYL
Sbjct: 47 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 103
Query: 547 RGSLAIIL-SNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + ID + + + Y+ + +HRD++++N+L+ +
Sbjct: 104 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENE 157
Query: 606 YDAHVSDFGISKFLKPDSS 624
+ DFG++K L D
Sbjct: 158 NRVKIGDFGLTKVLPQDKE 176
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 78 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 134
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 135 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 192 FVGTAQYVSP 201
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 491 IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
VA+K + + ++ F +E + + H N+++ G + +L E++ G+L
Sbjct: 44 CVAIKTLKGGYTERQ-RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 102
Query: 551 AIILS-NDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L ND +F+ + +++ +A+ + Y+ + VHRD++++N+L+ +
Sbjct: 103 DSFLRLNDG---QFTVIQLVGMLRGIASGMRYLAEMSY---VHRDLAARNILVNSNLVCK 156
Query: 610 VSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639
VSDFG+S+FL+ +SS+ + + G PI
Sbjct: 157 VSDFGLSRFLEENSSD-PTYTSSLGGKIPI 185
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ EYL
Sbjct: 40 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 547 RGSLAIIL-SNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + ID + + + Y+ + +HRD++++N+L+ +
Sbjct: 97 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENE 150
Query: 606 YDAHVSDFGISKFLKPDSS 624
+ DFG++K L D
Sbjct: 151 NRVKIGDFGLTKVLPQDKE 169
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 83 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 139
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 140 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 196
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 197 FVGTAQYVSP 206
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 81 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 137
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 138 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 194
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 195 FVGTAQYVSP 204
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ EYL
Sbjct: 46 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 102
Query: 547 RGSLAIILS-NDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + ID + + + Y+ + +HRD++++N+L+ +
Sbjct: 103 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENE 156
Query: 606 YDAHVSDFGISKFLKPDSS 624
+ DFG++K L D
Sbjct: 157 NRVKIGDFGLTKVLPQDKE 175
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 58 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 114
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 115 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 171
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 172 FVGTAQYVSP 181
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 23/179 (12%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSN---EIKALTELRHRNVVKFY 529
IG G VY+A E+ H P D + Q N E K L+H N++
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDED--ISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 530 GFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEF--SWTVRMNVIKSVANTLSYMHHDYF 587
G L+ E+ G L +LS + +W V+ +A ++Y+H +
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDEAI 126
Query: 588 PPIVHRDISSKNVLLGLDYD--------AHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
PI+HRD+ S N+L+ + ++DFG+++ + G + ++AP
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK--MSAAGAYAWMAP 183
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 9/169 (5%)
Query: 457 YEEVIRATN-NFDAKYCIGTAGQASVYKAELPSWE--IVAVKKFHSPHPDMVVQQAFSNE 513
+ + + ATN + D G G+ + +LPS + VA+K + + ++ F E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGE 96
Query: 514 IKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIK 573
+ + H N+++ G + ++ EY+ GSL L A +F+ + +++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLR 154
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+A+ + Y+ F VHRD++++N+L+ + VSDFG+S+ L+ D
Sbjct: 155 GIASGMKYLSDMGF---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 57 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 113
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 114 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 170
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 171 FVGTAQYVSP 180
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 61
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E S V + + +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQI 120
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 121 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
+ F E K + L H +V+ YG R F++ EY+ G L L F
Sbjct: 54 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQ 111
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+ + K V + Y+ F +HRD++++N L+ VSDFG+S+++ D
Sbjct: 112 QLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---- 164
Query: 627 SEFVGTFGYVAPI 639
E+ + G P+
Sbjct: 165 -EYTSSVGSKFPV 176
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 62 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 118
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 119 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 175
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 176 FVGTAQYVSP 185
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 80 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 136
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 137 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 194 FVGTAQYVSP 203
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 19/195 (9%)
Query: 441 GDVKLFSILTFEGKILYEEVIRATNNF-----------DAKYCIGTAGQASVYKAELPSW 489
G +KL + TF YE+ + + F D G G+ + +LPS
Sbjct: 12 GHLKLPGLRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 490 E--IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGR 547
+ VA+K + + ++ F E + + H N+++ G + ++ EY+
Sbjct: 72 KEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN 130
Query: 548 GSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607
GSL L A +F+ + +++ +A+ + Y+ + VHRD++++N+L+ +
Sbjct: 131 GSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLV 185
Query: 608 AHVSDFGISKFLKPD 622
VSDFG+S+ L+ D
Sbjct: 186 CKVSDFGLSRVLEDD 200
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 78 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 134
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 135 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANA 191
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 192 FVGTAQYVSP 201
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ EYL
Sbjct: 44 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 100
Query: 547 RGSLAIIL-SNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + ID + + + Y+ + +HRD++++N+L+ +
Sbjct: 101 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENE 154
Query: 606 YDAHVSDFGISKFLKPDSS 624
+ DFG++K L D
Sbjct: 155 NRVKIGDFGLTKVLPQDKE 173
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F+F + LY L +L I F T
Sbjct: 80 TRERDVMSRLDHPFFVKLY-FTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 136
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 137 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 194 FVGTAQYVSP 203
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ EYL
Sbjct: 45 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 101
Query: 547 RGSLAIIL-SNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + ID + + + Y+ + +HRD++++N+L+ +
Sbjct: 102 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENE 155
Query: 606 YDAHVSDFGISKFLKPDSS 624
+ DFG++K L D
Sbjct: 156 NRVKIGDFGLTKVLPQDKE 174
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 61
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E S V + + +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQI 120
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 121 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 61
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E S V + + +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQI 120
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 121 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 465 NNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
+ K+ +G VY+ + + VAVK D + + F E + E++H
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHP 67
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+V+ G +++ E++ G+L L + E S V + + +++ + Y+
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 127 KKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 163
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 61
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E S V + + +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQI 120
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 121 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 488 SWEIVAVKKFHSPHPDMVVQQAFS---NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544
S ++VAVKK D+ QQ NE+ + + +H NVV+ Y + +++ E+
Sbjct: 98 SGKLVAVKKM-----DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152
Query: 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL 604
L G+L I+++ +E V + V+++ LS +H ++HRDI S ++LL
Sbjct: 153 LEGGALTDIVTHTRMNEEQIAAVCLAVLQA----LSVLHAQG---VIHRDIKSDSILLTH 205
Query: 605 DYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
D +SDFG + + VGT ++AP
Sbjct: 206 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 239
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
++ F E + + +L H +V+ YG L++E++ G L+ L + F+
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAE 103
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+ + V ++Y+ ++HRD++++N L+G + VSDFG+++F+ D
Sbjct: 104 TLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 156
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
++ F E + + +L H +V+ YG L++E++ G L+ L + F+
Sbjct: 44 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAE 101
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+ + V ++Y+ ++HRD++++N L+G + VSDFG+++F+ D
Sbjct: 102 TLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 154
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 66
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E S V + + +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQI 125
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 126 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 170
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
++ F E + + +L H +V+ YG L++E++ G L+ L + F+
Sbjct: 49 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAE 106
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+ + V ++Y+ ++HRD++++N L+G + VSDFG+++F+ D
Sbjct: 107 TLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
++ F E + + +L H +V+ YG L++E++ G L+ L + F+
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAE 103
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+ + V ++Y+ ++HRD++++N L+G + VSDFG+++F+ D
Sbjct: 104 TLLGMCLDVCEGMAYLEE---ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 156
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 488 SWEIVAVKKFHSPHPDMVVQQAFS---NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544
S ++VAVKK D+ QQ NE+ + + +H NVV+ Y + +++ E+
Sbjct: 53 SGKLVAVKKM-----DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 107
Query: 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL 604
L G+L I+++ +E V + V+++ LS +H ++HRDI S ++LL
Sbjct: 108 LEGGALTDIVTHTRMNEEQIAAVCLAVLQA----LSVLHAQG---VIHRDIKSDSILLTH 160
Query: 605 DYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
D +SDFG + + VGT ++AP
Sbjct: 161 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 194
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 488 SWEIVAVKKFHSPHPDMVVQQAFS---NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544
S ++VAVKK D+ QQ NE+ + + +H NVV+ Y + +++ E+
Sbjct: 55 SGKLVAVKKM-----DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 109
Query: 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL 604
L G+L I+++ +E V + V+++ LS +H ++HRDI S ++LL
Sbjct: 110 LEGGALTDIVTHTRMNEEQIAAVCLAVLQA----LSVLHAQG---VIHRDIKSDSILLTH 162
Query: 605 DYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
D +SDFG + + VGT ++AP
Sbjct: 163 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 196
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E ++ L H VK Y F F + LY L +L I F T
Sbjct: 85 TRERDVMSRLDHPFFVKLY-FCFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 141
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSE 628
+ + L Y+H I+HRD+ +N+LL D ++DFG +K L P+S + +
Sbjct: 142 YTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 198
Query: 629 FVGTFGYVAP 638
FVGT YV+P
Sbjct: 199 FVGTAQYVSP 208
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 488 SWEIVAVKKFHSPHPDMVVQQAFS---NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544
S ++VAVKK D+ QQ NE+ + + +H NVV+ Y + +++ E+
Sbjct: 48 SGKLVAVKKM-----DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 102
Query: 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL 604
L G+L I+++ +E V + V+++ LS +H ++HRDI S ++LL
Sbjct: 103 LEGGALTDIVTHTRMNEEQIAAVCLAVLQA----LSVLHAQG---VIHRDIKSDSILLTH 155
Query: 605 DYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
D +SDFG + + VGT ++AP
Sbjct: 156 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 189
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL- 550
VA+K S + + ++ F +E + + H NV+ G ++ E++ GSL
Sbjct: 64 VAIKTLKSGYTEKQ-RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 551 AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHV 610
+ + ND +F+ + +++ +A + Y+ + VHRD++++N+L+ + V
Sbjct: 123 SFLRQNDG---QFTVIQLVGMLRGIAAGMKYLADMNY---VHRDLAARNILVNSNLVCKV 176
Query: 611 SDFGISKFLKPDSSNWSEFVGTFGYVAPI 639
SDFG+S+FL+ D+S+ + G PI
Sbjct: 177 SDFGLSRFLEDDTSD-PTYTSALGGKIPI 204
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
+ F E K + L H +V+ YG R F++ EY+ G L L F
Sbjct: 63 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQ 120
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN 625
+ + K V + Y+ F +HRD++++N L+ VSDFG+S+++ D
Sbjct: 121 QLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEET 176
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 488 SWEIVAVKKFHSPHPDMVVQQAFS---NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544
S ++VAVKK D+ QQ NE+ + + +H NVV+ Y + +++ E+
Sbjct: 44 SGKLVAVKKM-----DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98
Query: 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL 604
L G+L I+++ +E V + V+++ LS +H ++HRDI S ++LL
Sbjct: 99 LEGGALTDIVTHTRMNEEQIAAVCLAVLQA----LSVLHAQG---VIHRDIKSDSILLTH 151
Query: 605 DYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
D +SDFG + + VGT ++AP
Sbjct: 152 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 185
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
+ F E K + L H +V+ YG R F++ EY+ G L L F
Sbjct: 48 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQ 105
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+ + K V + Y+ F +HRD++++N L+ VSDFG+S+++ D
Sbjct: 106 QLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---- 158
Query: 627 SEFVGTFGYVAPI 639
E+ + G P+
Sbjct: 159 -EYTSSRGSKFPV 170
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 488 SWEIVAVKKFHSPHPDMVVQQAFS---NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544
S ++VAVKK D+ QQ NE+ + + +H NVV+ Y + +++ E+
Sbjct: 175 SGKLVAVKKM-----DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229
Query: 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL 604
L G+L I+++ +E V + V+++ LS +H ++HRDI S ++LL
Sbjct: 230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQA----LSVLHAQG---VIHRDIKSDSILLTH 282
Query: 605 DYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
D +SDFG + + VGT ++AP
Sbjct: 283 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 316
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VAVK D + + F E + E++H N+V+ G +++ E++ G+L
Sbjct: 39 VAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L + E S V + + +++ + Y+ F +HRD++++N L+G ++ V+
Sbjct: 96 DYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVA 151
Query: 612 DFGISKFLKPDS 623
DFG+S+ + D+
Sbjct: 152 DFGLSRLMTGDT 163
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VAVK D + + F E + E++H N+V+ G +++ EY+ G+L
Sbjct: 60 VAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLL 116
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L + +E + V + + +++ + Y+ F +HRD++++N L+G ++ V+
Sbjct: 117 DYL-RECNREEVTAVVLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHVVKVA 172
Query: 612 DFGISKFLKPDS 623
DFG+S+ + D+
Sbjct: 173 DFGLSRLMTGDT 184
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
+ F E + + +L H +V+ YG L++E++ G L+ L + F+
Sbjct: 66 EDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAE 123
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+ + V ++Y+ ++HRD++++N L+G + VSDFG+++F+ D
Sbjct: 124 TLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 176
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 457 YEEVIRATN-NFDAKYCIGTAGQASVYKAELPSW-EI-VAVKKFHSPHPDMVVQQAFSNE 513
+ + + ATN + D G G+ + +LPS EI VA+K + + ++ F E
Sbjct: 26 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGE 84
Query: 514 IKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIK 573
+ + H N+++ G + ++ EY+ GSL L A +F+ + +++
Sbjct: 85 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLR 142
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+A+ + Y+ + VHRD++++N+L+ + VSDFG+S+ L+ D
Sbjct: 143 GIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 188
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 62
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E + V + + +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI 121
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 122 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 166
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSK 598
FL+++ + +G L L+ A+ E ++++S+ +S++H + IVHRD+ +
Sbjct: 176 FLVFDLMRKGELFDYLTEKVALSE---KETRSIMRSLLEAVSFLHANN---IVHRDLKPE 229
Query: 599 NVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
N+LL + +SDFG S L+P E GT GY+AP
Sbjct: 230 NILLDDNMQIRLSDFGFSCHLEP-GEKLRELCGTPGYLAP 268
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 19/195 (9%)
Query: 441 GDVKLFSILTFEGKILYEEVIRATNNF-----------DAKYCIGTAGQASVYKAELPSW 489
G +KL + T+ YE+ + + F D G G+ + +LPS
Sbjct: 12 GHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 490 E--IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGR 547
+ VA+K + + ++ F E + + H N+++ G + ++ EY+
Sbjct: 72 KEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN 130
Query: 548 GSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607
GSL L A +F+ + +++ +A+ + Y+ + VHRD++++N+L+ +
Sbjct: 131 GSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLV 185
Query: 608 AHVSDFGISKFLKPD 622
VSDFG+S+ L+ D
Sbjct: 186 CKVSDFGLSRVLEDD 200
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 62
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E + V + + +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI 121
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 122 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 166
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 457 YEEVIRATN-NFDAKYCIGTAGQASVYKAELPSW-EI-VAVKKFHSPHPDMVVQQAFSNE 513
+ + + ATN + D G G+ + +LPS EI VA+K + + ++ F E
Sbjct: 9 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGE 67
Query: 514 IKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIK 573
+ + H N+++ G + ++ EY+ GSL L A +F+ + +++
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLR 125
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+A+ + Y+ + VHRD++++N+L+ + VSDFG+S+ L+ D
Sbjct: 126 GIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 171
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 19/195 (9%)
Query: 441 GDVKLFSILTFEGKILYEEVIRATNNF-----------DAKYCIGTAGQASVYKAELPSW 489
G +KL + T+ YE+ + + F D G G+ + +LPS
Sbjct: 10 GHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 69
Query: 490 E--IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGR 547
+ VA+K + + ++ F E + + H N+++ G + ++ EY+
Sbjct: 70 KEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN 128
Query: 548 GSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607
GSL L A +F+ + +++ +A+ + Y+ + VHRD++++N+L+ +
Sbjct: 129 GSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLV 183
Query: 608 AHVSDFGISKFLKPD 622
VSDFG+S+ L+ D
Sbjct: 184 CKVSDFGLSRVLEDD 198
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 84/169 (49%), Gaps = 9/169 (5%)
Query: 457 YEEVIRATN-NFDAKYCIGTAGQASVYKAELPSWE--IVAVKKFHSPHPDMVVQQAFSNE 513
+ + + ATN + D G G+ + +LPS + VA+K + + ++ F E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGE 96
Query: 514 IKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIK 573
+ + H N+++ G + ++ EY+ GSL L A +F+ + +++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLR 154
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+A+ + Y+ + VHRD++++N+L+ + VSDFG+S+ L+ D
Sbjct: 155 GIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS 532
+G VYKA+ IVA+K+ D + EI L EL H N+V
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 533 FHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM-NVIKSVANTLSYMHHDYFPPIV 591
R L++E++ + ++ N + + + + +++ VA+ + H I+
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC--HQHR-----IL 141
Query: 592 HRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
HRD+ +N+L+ D ++DFG+++ +++ V T Y AP
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAP 188
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS 532
+G VYKA+ IVA+K+ D + EI L EL H N+V
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 533 FHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM-NVIKSVANTLSYMHHDYFPPIV 591
R L++E++ + ++ N + + + + +++ VA+ + H I+
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC--HQHR-----IL 141
Query: 592 HRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
HRD+ +N+L+ D ++DFG+++ +++ V T Y AP
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAP 188
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 63
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E + V + + +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI 122
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 123 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 167
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 66
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E + V + + +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI 125
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 126 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 170
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 84/169 (49%), Gaps = 9/169 (5%)
Query: 457 YEEVIRATN-NFDAKYCIGTAGQASVYKAELPSWE--IVAVKKFHSPHPDMVVQQAFSNE 513
+ + + ATN + D G G+ + +LPS + VA+K + + ++ F E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGE 96
Query: 514 IKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIK 573
+ + H N+++ G + ++ EY+ GSL L A +F+ + +++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLR 154
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+A+ + Y+ + VHRD++++N+L+ + VSDFG+S+ L+ D
Sbjct: 155 GIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 66
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E + V + + +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI 125
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 126 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 170
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 65
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E + V + + +
Sbjct: 66 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI 124
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 125 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 169
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 501 HPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS--FLLYEYLGRGSLAII----- 553
P ++Q + EI L +L H NVVK P + ++++E + +G + +
Sbjct: 75 QPRGPIEQVY-QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 133
Query: 554 LSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDF 613
LS D A F ++IK + Y+H + I+HRDI N+L+G D ++DF
Sbjct: 134 LSEDQARFYFQ-----DLIKGI----EYLH---YQKIIHRDIKPSNLLVGEDGHIKIADF 181
Query: 614 GISKFLKPDSSNWSEFVGTFGYVAP 638
G+S K + S VGT ++AP
Sbjct: 182 GVSNEFKGSDALLSNTVGTPAFMAP 206
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 66
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E + V + + +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI 125
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 126 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 170
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 66
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E + V + + +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI 125
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 126 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 170
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 63
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E + V + + +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI 122
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 123 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 167
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 61
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E + V + + +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI 120
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 121 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 86
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 87 --IYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLK 620
++ N+L+G + V+DFG+++ ++
Sbjct: 141 AAANILVGENLVCKVADFGLARLIE 165
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ E+L
Sbjct: 43 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLP 99
Query: 547 RGSLAIIL-SNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + ID + + + Y+ + +HRD++++N+L+ +
Sbjct: 100 YGSLREYLQKHKERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENE 153
Query: 606 YDAHVSDFGISKFLKPDSS 624
+ DFG++K L D
Sbjct: 154 NRVKIGDFGLTKVLPQDKE 172
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 61
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E + V + + +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI 120
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 121 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 63
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E + V + + +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI 122
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HRD++++N L+G ++ V+DFG+S+ + D+
Sbjct: 123 SSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 167
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 24 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 83
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 84 --IYIVTEYMNKGSLLDFLKGETG-KYLRLPQLVDMSAQIASGMAYVERMNY---VHRDL 137
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGT 632
+ N+L+G + V+DFG+++ + + + W+ G
Sbjct: 138 RAANILVGENLVCKVADFGLARLI--EDNEWTARQGA 172
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 20 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 79
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 80 --IYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 133
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLK 620
+ N+L+G + V+DFG+++ ++
Sbjct: 134 RAANILVGENLVCKVADFGLARLIE 158
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
++ F E + + +L H +V+ YG L+ E++ G L+ L + F+
Sbjct: 47 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL--FAAE 104
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+ + V ++Y+ ++HRD++++N L+G + VSDFG+++F+ D
Sbjct: 105 TLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 473 IGTAGQASVYKAELPSWE--IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG 530
+G G+ + ++P VA+K + + D ++ F +E + + H N++ G
Sbjct: 24 VGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPNIIHLEG 82
Query: 531 FSFHPRQSFLLYEYLGRGSL-AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
+ ++ EY+ GSL A + ND F+ + +++ + + + Y+ +
Sbjct: 83 VVTKCKPVMIITEYMENGSLDAFLRKNDG---RFTVIQLVGMLRGIGSGMKYLSDMSY-- 137
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
VHRD++++N+L+ + VSDFG+S+ L+ D
Sbjct: 138 -VHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 169
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 27/183 (14%)
Query: 472 CIGTAGQASVYKAELPSW--EIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFY 529
C+G V++ SW E VAVK F S ++ E+ LRH N++ F
Sbjct: 44 CVGKGRYGEVWRG---SWQGENVAVKIFSSRDEKSWFRET---ELYNTVMLRHENILGFI 97
Query: 530 GFSFHPRQS----FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD 585
R S +L+ Y GSL L +D S + ++ S+A+ L+++H +
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSC---LRIVLSIASGLAHLHIE 153
Query: 586 YF-----PPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEF-----VGTFGY 635
F P I HRD+ SKN+L+ + ++D G++ + S+N + VGT Y
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRY 212
Query: 636 VAP 638
+AP
Sbjct: 213 MAP 215
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 473 IGTAGQASVYKAELPSWE--IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG 530
+G G+ + ++P VA+K + + D ++ F +E + + H N++ G
Sbjct: 18 VGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPNIIHLEG 76
Query: 531 FSFHPRQSFLLYEYLGRGSL-AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
+ ++ EY+ GSL A + ND F+ + +++ + + + Y+ +
Sbjct: 77 VVTKCKPVMIITEYMENGSLDAFLRKNDG---RFTVIQLVGMLRGIGSGMKYLSDMSY-- 131
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
VHRD++++N+L+ + VSDFG+S+ L+ D
Sbjct: 132 -VHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 163
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Query: 470 KYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
K+ +G VY+ + + VAVK D + + F E + E++H N+V+
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQL 281
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
G +++ E++ G+L L + E S V + + +++ + Y+ F
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNF- 339
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
+HR+++++N L+G ++ V+DFG+S+ + D+
Sbjct: 340 --IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 13/142 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLG 546
E+VAVKK HS + + F EI+ L L+H N+VK+ G +S R L+ EYL
Sbjct: 41 EVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 97
Query: 547 RGSLAIIL-SNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + ID + + + Y+ + +HR+++++N+L+ +
Sbjct: 98 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYLGTKRY---IHRNLATRNILVENE 151
Query: 606 YDAHVSDFGISKFLKPDSSNWS 627
+ DFG++K L D +
Sbjct: 152 NRVKIGDFGLTKVLPQDKEYYK 173
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 491 IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS--FLLYEYLGRG 548
+VAVK+ PD Q+ F EI+ L L +VK+ G S+ P + L+ EYL G
Sbjct: 38 LVAVKQLQHSGPDQ--QRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 549 SLAIILSNDAAIDEFSWTVRMNVIKS-VANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607
L L A + S R+ + S + + Y+ VHRD++++N+L+ +
Sbjct: 96 CLRDFLQRHRARLDAS---RLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 149
Query: 608 AHVSDFGISKFLKPD 622
++DFG++K L D
Sbjct: 150 VKIADFGLAKLLPLD 164
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 27/183 (14%)
Query: 472 CIGTAGQASVYKAELPSW--EIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFY 529
C+G V++ SW E VAVK F S ++ E+ LRH N++ F
Sbjct: 15 CVGKGRYGEVWRG---SWQGENVAVKIFSSRDEKSWFRET---ELYNTVMLRHENILGFI 68
Query: 530 GFSFHPRQS----FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD 585
R S +L+ Y GSL L +D S + ++ S+A+ L+++H +
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSC---LRIVLSIASGLAHLHIE 124
Query: 586 YF-----PPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEF-----VGTFGY 635
F P I HRD+ SKN+L+ + ++D G++ + S+N + VGT Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRY 183
Query: 636 VAP 638
+AP
Sbjct: 184 MAP 186
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 474 GTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYG- 530
GT GQ VYK + + ++ A+K + ++ EI L + HRN+ +YG
Sbjct: 35 GTYGQ--VYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 531 -FSFHP----RQSFLLYEYLGRGSLAIILSNDAAID-EFSWTVRMNVIKSVANTLSYMHH 584
+P Q +L+ E+ G GS+ ++ N + W + + + LS++H
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA--YICREILRGLSHLHQ 147
Query: 585 DYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRDI +NVLL + + + DFG+S L + F+GT ++AP
Sbjct: 148 H---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAP 198
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 86
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 87 --IYIVCEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLK 620
+ N+L+G + V+DFG+++ ++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIE 165
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 27/183 (14%)
Query: 472 CIGTAGQASVYKAELPSW--EIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFY 529
C+G V++ SW E VAVK F S ++ E+ LRH N++ F
Sbjct: 15 CVGKGRYGEVWRG---SWQGENVAVKIFSSRDEKSWFRET---ELYNTVMLRHENILGFI 68
Query: 530 GFSFHPRQS----FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD 585
R S +L+ Y GSL L +D S + ++ S+A+ L+++H +
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSC---LRIVLSIASGLAHLHIE 124
Query: 586 YF-----PPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEF-----VGTFGY 635
F P I HRD+ SKN+L+ + ++D G++ + S+N + VGT Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRY 183
Query: 636 VAP 638
+AP
Sbjct: 184 MAP 186
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 86
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 87 --IYIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLK 620
+ N+L+G + V+DFG+++ ++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIE 165
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 86
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 87 --IYIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLK 620
+ N+L+G + V+DFG+++ ++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIE 165
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 84/169 (49%), Gaps = 9/169 (5%)
Query: 457 YEEVIRATN-NFDAKYCIGTAGQASVYKAELPSWE--IVAVKKFHSPHPDMVVQQAFSNE 513
+ + + ATN + D G G+ + +LPS + VA+K + + ++ F E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGE 96
Query: 514 IKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIK 573
+ + H N+++ G + ++ EY+ GSL L A +F+ + +++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLR 154
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+A+ + Y+ + VHRD++++N+L+ + VSDFG+++ L+ D
Sbjct: 155 GIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLARVLEDD 200
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 16 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 75
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 76 --IYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 129
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLK 620
+ N+L+G + V+DFG+++ ++
Sbjct: 130 RAANILVGENLVCKVADFGLARLIE 154
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 86
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 87 --IYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLK 620
+ N+L+G + V+DFG+++ ++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIE 165
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 252
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 253 --IYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 306
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639
+ N+L+G + V+DFG+++ ++ + E+ G PI
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAKFPI 345
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 18 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 77
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 78 --IYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 131
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLK 620
+ N+L+G + V+DFG+++ ++
Sbjct: 132 RAANILVGENLVCKVADFGLARLIE 156
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 252
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 253 --IYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 306
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639
+ N+L+G + V+DFG+++ ++ + E+ G PI
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAKFPI 345
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 24 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 83
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 84 --IYIVTEYMNKGSLLDFLKGETG-KYLRLPQLVDMSAQIASGMAYVERMNY---VHRDL 137
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLK 620
+ N+L+G + V+DFG+++ ++
Sbjct: 138 RAANILVGENLVCKVADFGLARLIE 162
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 11/170 (6%)
Query: 473 IGTAGQASVYKAELP----SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
+ T G+ + K +L + + VAV+ + Q E++ + L H N+VK
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+ + +L+ EY G + L + E + + + + + Y H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF-- 133
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
IVHRD+ ++N+LL D + ++DFG S + EF G+ Y AP
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDEFCGSPPYAAP 181
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 23/141 (16%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM 569
F NE++ +T++++ + G + + +++YEY+ S+ DE+ + +
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSIL-------KFDEYFFVLDK 142
Query: 570 N------------VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
N +IKSV N+ SY+H++ I HRD+ N+L+ + +SDFG S+
Sbjct: 143 NYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESE 200
Query: 618 FLKPDSSNWSEFVGTFGYVAP 638
++ S GT+ ++ P
Sbjct: 201 YMVDKKIKGSR--GTYEFMPP 219
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 83/169 (49%), Gaps = 9/169 (5%)
Query: 457 YEEVIRATN-NFDAKYCIGTAGQASVYKAELPSWE--IVAVKKFHSPHPDMVVQQAFSNE 513
+ + + ATN + D G G+ + +LPS + VA+K + + ++ F E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGE 96
Query: 514 IKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIK 573
+ + H N+++ G + ++ EY+ GSL L A +F+ + +++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLR 154
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+A+ + Y+ + VHRD++++N+L+ + VSDFG+ + L+ D
Sbjct: 155 GIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY-EYLGRGSL 550
+A+K+ P D Q EI L+H+N+V++ G SF ++ E + GSL
Sbjct: 50 IAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYLG-SFSENGFIKIFMEQVPGGSL 106
Query: 551 AIILSND-AAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA- 608
+ +L + + + T+ K + L Y+H + IVHRDI NVL+ Y
Sbjct: 107 SALLRSKWGPLKDNEQTIGF-YTKQILEGLKYLHDNQ---IVHRDIKGDNVLINT-YSGV 161
Query: 609 -HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+SDFG SK L + F GT Y+AP
Sbjct: 162 LKISDFGTSKRLAGINPCTETFTGTLQYMAP 192
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 465 NNFDAKYCIGTAGQASVYK-AELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
++F+ +G V+K + PS ++A K H + Q E++ L E
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSP 83
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
+V FYG + + + E++ GSL +L I E + V +V L+Y+
Sbjct: 84 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYLR 140
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ I+HRD+ N+L+ + + DFG+S L +N FVGT Y++P
Sbjct: 141 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 191
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 16/172 (9%)
Query: 473 IGTAGQASVYK------AELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVV 526
+G G A Y+ E+ + ++V PH ++ S EI L + +VV
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH----QKEKMSTEIAIHKSLDNPHVV 89
Query: 527 KFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDY 586
F+GF +++ E R SL + A+ E M + + Y+H++
Sbjct: 90 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM---RQTIQGVQYLHNNR 146
Query: 587 FPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ N+ L D D + DFG++ ++ D + GT Y+AP
Sbjct: 147 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAP 195
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 8/174 (4%)
Query: 466 NFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN 524
N+ + IG A V A + + VAVK + Q E++ + L H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 525 VVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
+VK + + +L+ EY G + L + E + + + + + Y H
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQ 132
Query: 585 DYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
Y IVHRD+ ++N+LL D + ++DFG S + F G+ Y AP
Sbjct: 133 KY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTV-GNKLDTFCGSPPYAAP 182
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 265
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E + V + + +
Sbjct: 266 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI 324
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HR+++++N L+G ++ V+DFG+S+ + D+
Sbjct: 325 SSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 369
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY-EYLGRGSL 550
+A+K+ P D Q EI L+H+N+V++ G SF ++ E + GSL
Sbjct: 36 IAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYLG-SFSENGFIKIFMEQVPGGSL 92
Query: 551 -AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA- 608
A++ S + + T+ K + L Y+H + IVHRDI NVL+ Y
Sbjct: 93 SALLRSKWGPLKDNEQTIGF-YTKQILEGLKYLHDNQ---IVHRDIKGDNVLINT-YSGV 147
Query: 609 -HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+SDFG SK L + F GT Y+AP
Sbjct: 148 LKISDFGTSKRLAGINPCTETFTGTLQYMAP 178
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 252
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 253 --IYIVGEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 306
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639
+ N+L+G + V+DFG+++ ++ + E+ G PI
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAKFPI 345
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
+ F E + + +L H +VKFYG +++ EY+ G L L + E S
Sbjct: 47 EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL 106
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+ M V ++++ F +HRD++++N L+ D VSDFG+++++ D
Sbjct: 107 LEM--CYDVCEGMAFLESHQF---IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD---- 157
Query: 627 SEFVGTFGYVAPI 639
++V + G P+
Sbjct: 158 -QYVSSVGTKFPV 169
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 11/177 (6%)
Query: 466 NFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSP---HPDMVVQQAFSNEIKALTELR 521
+F +G A VY+AE + + VA+K MV Q NE+K +L+
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMV--QRVQNEVKIHCQLK 69
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H ++++ Y + +L+ E G + L N + FS + + + + Y
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN--RVKPFSENEARHFMHQIITGMLY 127
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+H I+HRD++ N+LL + + ++DFG++ LK GT Y++P
Sbjct: 128 LHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISP 181
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 276 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 335
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 336 --IYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 389
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLK 620
+ N+L+G + V+DFG+++ ++
Sbjct: 390 RAANILVGENLVCKVADFGLARLIE 414
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 33/181 (18%)
Query: 465 NNFDAKYCIGTAGQASVYKAELPS------WEIVAVKKF-HSPHPDMVVQQAFSNEIKAL 517
NN + IG V++A P + +VAVK DM Q F E +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADM--QADFQREAALM 104
Query: 518 TELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL----------------SNDAAID 561
E + N+VK G + LL+EY+ G L L S A +
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164
Query: 562 E-----FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGIS 616
S ++ + + VA ++Y+ F VHRD++++N L+G + ++DFG+S
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFGLS 221
Query: 617 K 617
+
Sbjct: 222 R 222
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 465 NNFDAKYCIGTAGQASVYK-AELPSWEIVAVKKFHSPHPDMVVQQAFSN----EIKALTE 519
++F+ +G V+K + PS ++A K H + ++ A N E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH-----LEIKPAIRNQIIRELQVLHE 60
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
+V FYG + + + E++ GSL +L I E + V +V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGL 117
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+Y+ + I+HRD+ N+L+ + + DFG+S L +N FVGT Y++P
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 172
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 465 NNFDAKYCIGTAGQASVYK-AELPSWEIVAVKKFHSPHPDMVVQQAFSN----EIKALTE 519
++F+ +G V+K + PS ++A K H + ++ A N E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH-----LEIKPAIRNQIIRELQVLHE 60
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
+V FYG + + + E++ GSL +L I E + V +V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGL 117
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+Y+ + I+HRD+ N+L+ + + DFG+S L +N FVGT Y++P
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 172
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL- 550
VA+K S + + ++ F +E + + H NV+ G ++ E++ GSL
Sbjct: 38 VAIKTLKSGYTEKQ-RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 96
Query: 551 AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHV 610
+ + ND +F+ + +++ +A + Y+ + VHR ++++N+L+ + V
Sbjct: 97 SFLRQNDG---QFTVIQLVGMLRGIAAGMKYLADMNY---VHRALAARNILVNSNLVCKV 150
Query: 611 SDFGISKFLKPDSSNWSEFVGTFGYVAPI 639
SDFG+S+FL+ D+S+ + G PI
Sbjct: 151 SDFGLSRFLEDDTSD-PTYTSALGGKIPI 178
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIK 515
Y++ + K+ +G VY+ + + VAVK D + + F E
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 307
Query: 516 ALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
+ E++H N+V+ G +++ E++ G+L L + E + V + + +
Sbjct: 308 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQI 366
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
++ + Y+ F +HR+++++N L+G ++ V+DFG+S+ + D+
Sbjct: 367 SSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 411
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 465 NNFDAKYCIGTAGQASVYK-AELPSWEIVAVKKFHSPHPDMVVQQAFSN----EIKALTE 519
++F+ +G V+K + PS ++A K H + ++ A N E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH-----LEIKPAIRNQIIRELQVLHE 60
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
+V FYG + + + E++ GSL +L I E + V +V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGL 117
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+Y+ + I+HRD+ N+L+ + + DFG+S L +N FVGT Y++P
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 172
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 465 NNFDAKYCIGTAGQASVYK-AELPSWEIVAVKKFHSPHPDMVVQQAFSN----EIKALTE 519
++F+ +G V+K + PS ++A K H + ++ A N E++ L E
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH-----LEIKPAIRNQIIRELQVLHE 87
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAI-DEFSWTVRMNVIKSVANT 578
+V FYG + + + E++ GSL +L I ++ V + VIK
Sbjct: 88 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG---- 143
Query: 579 LSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
L+Y+ + I+HRD+ N+L+ + + DFG+S L +N FVGT Y++P
Sbjct: 144 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 199
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 465 NNFDAKYCIGTAGQASVYK-AELPSWEIVAVKKFHSPHPDMVVQQAFSN----EIKALTE 519
++F+ +G V+K + PS ++A K H + ++ A N E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH-----LEIKPAIRNQIIRELQVLHE 60
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
+V FYG + + + E++ GSL +L I E + V +V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGL 117
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+Y+ + I+HRD+ N+L+ + + DFG+S L +N FVGT Y++P
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 172
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 465 NNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSN----EIKALTE 519
++F+ +G V K + PS I+A K H + ++ A N E++ L E
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIH-----LEIKPAIRNQIIRELQVLHE 70
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
+V FYG + + + E++ GSL +L I E + V +V L
Sbjct: 71 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE---EILGKVSIAVLRGL 127
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+Y+ + I+HRD+ N+L+ + + DFG+S L +N FVGT Y+AP
Sbjct: 128 AYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMAP 182
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + ++RH +V+ Y S P
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEP 86
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 87 --IYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLK 620
+ N+L+G + V+DFG+++ ++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIE 165
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 465 NNFDAKYCIGTAGQASVYK-AELPSWEIVAVKKFHSPHPDMVVQQAFSN----EIKALTE 519
++F+ +G V+K + PS ++A K H + ++ A N E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH-----LEIKPAIRNQIIRELQVLHE 60
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
+V FYG + + + E++ GSL +L I E + V +V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGL 117
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+Y+ + I+HRD+ N+L+ + + DFG+S L +N FVGT Y++P
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 172
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 17 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 76
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 77 --IXIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 130
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLK 620
+ N+L+G + V+DFG+++ ++
Sbjct: 131 RAANILVGENLVCKVADFGLARLIE 155
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 9/169 (5%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKK-FHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG 530
+G G ++VY AE I VA+K F P + F E+ ++L H+N+V
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 531 FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPI 590
+L+ EY+ +L+ + + + S +N + + + + H I
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHGPL---SVDTAINFTNQILDGIKHAHD---MRI 132
Query: 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS-SNWSEFVGTFGYVAP 638
VHRDI +N+L+ + + DFGI+K L S + + +GT Y +P
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSP 181
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 86
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +G L L + +++ +A+ ++Y+ + VHRD+
Sbjct: 87 --IYIVMEYMSKGCLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLK 620
+ N+L+G + V+DFG+++ ++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIE 165
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 473 IGTAGQASVYKAELPSWE--IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG 530
+G G+ + ++P VA+K + + D ++ F +E + + H N++ G
Sbjct: 39 VGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPNIIHLEG 97
Query: 531 FSFHPRQSFLLYEYLGRGSL-AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
+ ++ EY+ GSL A + ND F+ + +++ + + + Y+
Sbjct: 98 VVTKCKPVMIITEYMENGSLDAFLRKNDG---RFTVIQLVGMLRGIGSGMKYLSD---MS 151
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
VHRD++++N+L+ + VSDFG+S+ L+ D
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 19/148 (12%)
Query: 494 VKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAII 553
++KFH + NEI L L H N++K + + +L+ E+ G L
Sbjct: 86 IEKFH---------EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQ 136
Query: 554 LSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD---YDAHV 610
+ N DE N++K + + + Y+H IVHRDI +N+LL + +
Sbjct: 137 IINRHKFDECDAA---NIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKI 190
Query: 611 SDFGISKFLKPDSSNWSEFVGTFGYVAP 638
DFG+S F D + +GT Y+AP
Sbjct: 191 VDFGLSSFFSKDYK-LRDRLGTAYYIAP 217
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 465 NNFDAKYCIGTAGQASVYK-AELPSWEIVAVKKFHSPHPDMVVQQAFSN----EIKALTE 519
++F+ +G V+K + PS ++A K H + ++ A N E++ L E
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH-----LEIKPAIRNQIIRELQVLHE 122
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDE-FSWTVRMNVIKSVANT 578
+V FYG + + + E++ GSL +L I E V + VIK
Sbjct: 123 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG---- 178
Query: 579 LSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
L+Y+ + I+HRD+ N+L+ + + DFG+S L +N FVGT Y++P
Sbjct: 179 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 234
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 449 LTFEGKI----------LYEEVIRATNNFDAKYCI-----------GTAGQASVYKAELP 487
L F+GK+ YEE RA +F + G +G+ + +P
Sbjct: 14 LYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVP 73
Query: 488 SWE--IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYL 545
VA+K + + + ++ F +E + + H N+++ G R + ++ EY+
Sbjct: 74 GQRDVPVAIKALKAGYTERQ-RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132
Query: 546 GRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L +F+ + +++ V + Y+ + VHRD++++NVL+ +
Sbjct: 133 ENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDSN 187
Query: 606 YDAHVSDFGISKFLKPD 622
VSDFG+S+ L+ D
Sbjct: 188 LVCKVSDFGLSRVLEDD 204
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 449 LTFEGKI----------LYEEVIRATNNFDAKYCI-----------GTAGQASVYKAELP 487
L F+GK+ YEE RA +F + G +G+ + +P
Sbjct: 14 LYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVP 73
Query: 488 SWE--IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYL 545
VA+K + + + ++ F +E + + H N+++ G R + ++ EY+
Sbjct: 74 GQRDVPVAIKALKAGYTERQ-RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132
Query: 546 GRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L +F+ + +++ V + Y+ + VHRD++++NVL+ +
Sbjct: 133 ENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDSN 187
Query: 606 YDAHVSDFGISKFLKPD 622
VSDFG+S+ L+ D
Sbjct: 188 LVCKVSDFGLSRVLEDD 204
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 86
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +G L L + +++ +A+ ++Y+ + VHRD+
Sbjct: 87 --IYIVTEYMSKGCLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLK 620
+ N+L+G + V+DFG+++ ++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIE 165
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 16/172 (9%)
Query: 473 IGTAGQASVYK------AELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVV 526
+G G A Y+ E+ + ++V PH ++ S EI L + +VV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH----QKEKMSTEIAIHKSLDNPHVV 105
Query: 527 KFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDY 586
F+GF +++ E R SL + A+ E M + + Y+H++
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM---RQTIQGVQYLHNNR 162
Query: 587 FPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ N+ L D D + DFG++ ++ D + GT Y+AP
Sbjct: 163 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAP 211
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 473 IGTAGQASVYKAELP----SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
+ T G+ + K +L + + VAVK + Q E++ + L H N+VK
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+ + +L+ EY G + L + E + + + + + Y H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF-- 133
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
IVHRD+ ++N+LL D + ++DFG S + F G+ Y AP
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAP 181
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFS 564
+++ E++ L +L H N++K Y F F + F L Y G I+S FS
Sbjct: 70 KESLLREVQLLKQLDHPNIMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISR----KRFS 124
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKFLKP 621
+I+ V + ++YMH + IVHRD+ +N+LL D + + DFG+S +
Sbjct: 125 EVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181
Query: 622 DSSNWSEFVGTFGYVAP 638
S + +GT Y+AP
Sbjct: 182 -SKKMKDKIGTAYYIAP 197
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 12/164 (7%)
Query: 477 GQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHP 535
GQ + + +W + P + +AF E + + +LRH +V+ Y S P
Sbjct: 194 GQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP 253
Query: 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595
+++ EY+ +GSL L + +++ +A+ ++Y+ + VHRD+
Sbjct: 254 --IYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 307
Query: 596 SSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639
+ N+L+G + V+DFG+ + ++ + E+ G PI
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDN-----EYTARQGAKFPI 346
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
++ S EI L H++VV F+GF F++ E R SL + A+ E
Sbjct: 61 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR 120
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
++ + Y+H + ++HRD+ N+ L D + + DFG++ ++ D
Sbjct: 121 Y---YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 174
Query: 627 SEFVGTFGYVAP 638
GT Y+AP
Sbjct: 175 KTLCGTPNYIAP 186
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 9/169 (5%)
Query: 457 YEEVIRATN-NFDAKYCIGTAGQASVYKAELPSW-EI-VAVKKFHSPHPDMVVQQAFSNE 513
+ + + ATN + D G G+ + +LPS EI VA+K + + ++ F E
Sbjct: 9 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGE 67
Query: 514 IKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIK 573
+ + H N+++ G + ++ E + GSL L A +F+ + +++
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVIQLVGMLR 125
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+A+ + Y+ + VHRD++++N+L+ + VSDFG+S+ L+ D
Sbjct: 126 GIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 171
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 473 IGTAGQASVYKAELP----SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
+ T G+ + K +L + + VAVK + Q E++ + L H N+VK
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+ + +L+ EY G + L + E + + + + + Y H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF-- 133
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
IVHRD+ ++N+LL D + ++DFG S + F G+ Y AP
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAP 181
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 19/195 (9%)
Query: 441 GDVKLFSILTFEGKILYEEVIRATNNF-----------DAKYCIGTAGQASVYKAELPSW 489
G +KL + T+ YE+ + + F D G G+ + +LPS
Sbjct: 12 GHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 490 E--IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGR 547
+ VA+K + + ++ F E + + H N+++ G + ++ E +
Sbjct: 72 KEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMEN 130
Query: 548 GSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607
GSL L A +F+ + +++ +A+ + Y+ + VHRD++++N+L+ +
Sbjct: 131 GSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLV 185
Query: 608 AHVSDFGISKFLKPD 622
VSDFG+S+ L+ D
Sbjct: 186 CKVSDFGLSRVLEDD 200
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFS 564
+++ E++ L +L H N++K Y F F + F L Y G I+S FS
Sbjct: 76 KESLLREVQLLKQLDHPNIMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISR----KRFS 130
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKFLKP 621
+I+ V + ++YMH + IVHRD+ +N+LL D + + DFG+S +
Sbjct: 131 EVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 187
Query: 622 DSSNWSEFVGTFGYVAP 638
S + +GT Y+AP
Sbjct: 188 -SKKMKDKIGTAYYIAP 203
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 473 IGTAGQASVYK------AELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVV 526
+G G A ++ E+ + +IV PH ++ S EI L H++VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH----QREKMSMEISIHRSLAHQHVV 80
Query: 527 KFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDY 586
F+GF F++ E R SL + A+ E ++ + Y+H +
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY---YLRQIVLGCQYLHRNR 137
Query: 587 FPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ N+ L D + + DFG++ ++ D GT Y+AP
Sbjct: 138 ---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFS 564
+++ E++ L +L H N++K Y F F + F L Y G I+S FS
Sbjct: 93 KESLLREVQLLKQLDHPNIMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISR----KRFS 147
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKFLKP 621
+I+ V + ++YMH + IVHRD+ +N+LL D + + DFG+S +
Sbjct: 148 EVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 204
Query: 622 DSSNWSEFVGTFGYVAP 638
S + +GT Y+AP
Sbjct: 205 -SKKMKDKIGTAYYIAP 220
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFS 564
+++ E++ L +L H N++K Y F F + F L Y G I+S FS
Sbjct: 94 KESLLREVQLLKQLDHPNIMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISR----KRFS 148
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKFLKP 621
+I+ V + ++YMH + IVHRD+ +N+LL D + + DFG+S +
Sbjct: 149 EVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 205
Query: 622 DSSNWSEFVGTFGYVAP 638
S + +GT Y+AP
Sbjct: 206 -SKKMKDKIGTAYYIAP 221
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 38/182 (20%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS 532
IG+ +VYK + V + K P P+ QAF NE+ L + RH N++ F G
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQF--QAFRNEVAVLRKTRHVNILLFMG-- 99
Query: 533 FHPRQSFLLYEYLGRGSLAII--------LSNDAAIDE--FSWTVRMNVIKSVANTLSYM 582
Y+ + +LAI+ L + E F +++ + A + Y+
Sbjct: 100 -----------YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 148
Query: 583 HHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGYV 636
H I+HRD+ S N+ L + DFG++ S WS + G+ ++
Sbjct: 149 HAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATV----KSRWSGSQQVEQPTGSVLWM 201
Query: 637 AP 638
AP
Sbjct: 202 AP 203
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 478 QASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQ 537
+ S K E+P VA+K + + + + F E + + H N+++ G +
Sbjct: 66 KTSSGKKEVP----VAIKTLKAGYTEKQ-RVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120
Query: 538 SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISS 597
++ EY+ G+L L EFS + +++ +A + Y+ + + VHRD+++
Sbjct: 121 MMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLANMNY---VHRDLAA 175
Query: 598 KNVLLGLDYDAHVSDFGISKFLKPD 622
+N+L+ + VSDFG+S+ L+ D
Sbjct: 176 RNILVNSNLVCKVSDFGLSRVLEDD 200
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
++ S EI L H++VV F+GF F++ E R SL + A+ E
Sbjct: 65 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR 124
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
++ + Y+H + ++HRD+ N+ L D + + DFG++ ++ D
Sbjct: 125 Y---YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 178
Query: 627 SEFVGTFGYVAP 638
GT Y+AP
Sbjct: 179 KTLCGTPNYIAP 190
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 11/170 (6%)
Query: 473 IGTAGQASVYKAELP----SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
+ T G+ + K +L + + VAVK + Q E++ + L H N+VK
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+ + +L+ EY G + L + E + + + + + Y H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF-- 133
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
IVHRD+ ++N+LL D + ++DFG S + F G Y AP
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAP 181
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 23/161 (14%)
Query: 473 IGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQA---FSNEIKALTELRHR 523
+G VY+ ++ PS VAVK P++ +Q F E +++L H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL----PEVCSEQDELDFLMEALIISKLNHQ 108
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM----NVIKSVANTL 579
N+V+ G S F+L E + G L L ++ M +V + +A
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 580 SYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISK 617
Y+ ++F +HRDI+++N LL G A + DFG+++
Sbjct: 169 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 473 IGTAGQASVYK------AELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVV 526
+G G A Y+ E+ + ++V PH ++ S EI L + +VV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH----QKEKMSTEIAIHKSLDNPHVV 105
Query: 527 KFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDY 586
F+GF +++ E R SL + A+ E M + + Y+H++
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM---RQTIQGVQYLHNNR 162
Query: 587 FPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ N+ L D D + DFG++ ++ D GT Y+AP
Sbjct: 163 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAP 211
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 23/161 (14%)
Query: 473 IGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQA---FSNEIKALTELRHR 523
+G VY+ ++ PS VAVK P++ +Q F E +++L H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL----PEVCSEQDELDFLMEALIISKLNHQ 94
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM----NVIKSVANTL 579
N+V+ G S F+L E + G L L ++ M +V + +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 580 SYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISK 617
Y+ ++F +HRDI+++N LL G A + DFG+++
Sbjct: 155 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 473 IGTAGQASVYKAELP----SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
+ T G+ + K +L + + VAVK + Q E++ + L H N+VK
Sbjct: 12 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 71
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+ + +L+ EY G + L + E + + + + + Y H +
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAK---FRQIVSAVQYCHQKF-- 126
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
IVHRD+ ++N+LL D + ++DFG S + F G+ Y AP
Sbjct: 127 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAAP 174
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 473 IGTAGQASVYK------AELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVV 526
+G G A Y+ E+ + ++V PH ++ S EI L + +VV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH----QKEKMSTEIAIHKSLDNPHVV 105
Query: 527 KFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDY 586
F+GF +++ E R SL + A+ E M + + Y+H++
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM---RQTIQGVQYLHNNR 162
Query: 587 FPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ N+ L D D + DFG++ ++ D GT Y+AP
Sbjct: 163 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAP 211
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 473 IGTAGQASVYKAELP----SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
+ T G+ + K +L + + VAV+ + Q E++ + L H N+VK
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+ + +L+ EY G + L + E + + + + + Y H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF-- 133
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
IVHRD+ ++N+LL D + ++DFG S + F G+ Y AP
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAP 181
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG 530
IG +VY A ++ + E+VA+KK +S Q E++ L +LRH N +++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 531 FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH-HDYFPP 589
++L+ EY + ++ + + E V L+Y+H H+
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLHSHN---- 174
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ + N+LL + DFG + + P + FVGT ++AP
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAP 219
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
++ S EI L H++VV F+GF F++ E R SL + A+ E
Sbjct: 83 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR 142
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
++ + Y+H + ++HRD+ N+ L D + + DFG++ ++ D
Sbjct: 143 Y---YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 196
Query: 627 SEFVGTFGYVAP 638
GT Y+AP
Sbjct: 197 KVLCGTPNYIAP 208
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 483 KAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542
K ELP VA+K + + ++ F E + + H N++ G + ++
Sbjct: 48 KRELP----VAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVT 102
Query: 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL 602
EY+ GSL L + +F+ + +++ ++ + Y+ + VHRD++++N+L+
Sbjct: 103 EYMENGSLDTFLKKNDG--QFTVIQLVGMLRGISAGMKYLSDMGY---VHRDLAARNILI 157
Query: 603 GLDYDAHVSDFGISKFLKPD 622
+ VSDFG+S+ L+ D
Sbjct: 158 NSNLVCKVSDFGLSRVLEDD 177
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
++ S EI L H++VV F+GF F++ E R SL + A+ E
Sbjct: 85 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR 144
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
++ + Y+H + ++HRD+ N+ L D + + DFG++ ++ D
Sbjct: 145 Y---YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 198
Query: 627 SEFVGTFGYVAP 638
GT Y+AP
Sbjct: 199 KVLCGTPNYIAP 210
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 473 IGTAGQASVYK------AELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVV 526
+G G A ++ E+ + +IV PH ++ S EI L H++VV
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQ----REKMSMEISIHRSLAHQHVV 78
Query: 527 KFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDY 586
F+GF F++ E R SL + A+ E ++ + Y+H +
Sbjct: 79 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY---YLRQIVLGCQYLHRNR 135
Query: 587 FPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ N+ L D + + DFG++ ++ D GT Y+AP
Sbjct: 136 ---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 184
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYG 530
IG +VY A ++ + E+VA+KK +S Q E++ L +LRH N +++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 531 FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH-HDYFPP 589
++L+ EY + ++ + + E V L+Y+H H+
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLHSHN---- 135
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ + N+LL + DFG + + P + FVGT ++AP
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAP 180
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 9/169 (5%)
Query: 457 YEEVIRATN-NFDAKYCIGTAGQASVYKAELPSWE--IVAVKKFHSPHPDMVVQQAFSNE 513
+ + + ATN + D G G+ + +LPS + VA+K + + ++ F E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGE 96
Query: 514 IKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIK 573
+ + H N+++ G + ++ E + GSL L A +F+ + +++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVIQLVGMLR 154
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+A+ + Y+ VHRD++++N+L+ + VSDFG+S+ L+ D
Sbjct: 155 GIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 473 IGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG +V+KA+ + EIVA+K+ D V + EI L EL+H+N+V+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 532 SFHPRQSFLLYEYLGRGSLAIILSNDAAID-EFSWTVRMNVIKSVANTLSYMHHDYFPPI 590
++ L++E+ + S + +D E + ++K L + H +
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG----LGFCHSRN---V 122
Query: 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+HRD+ +N+L+ + + ++DFG+++ +S V T Y P
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPP 170
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 509 AFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL--AIILSNDAAIDEFSWT 566
A +E+ L +L H N++K Y F R +L+ E G L IIL +FS
Sbjct: 50 ALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ-----KFSEV 104
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKFLKPDS 623
++K V + +Y+H IVHRD+ +N+LL D + DFG+S +
Sbjct: 105 DAAVIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-G 160
Query: 624 SNWSEFVGTFGYVAP 638
E +GT Y+AP
Sbjct: 161 GKMKERLGTAYYIAP 175
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP-----RQSFLLYEYLG 546
VA+KK SP Q EIK L RH N++ P + +L+ +G
Sbjct: 71 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMG 129
Query: 547 RGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY 606
++ + + D + + + L Y+H ++HRD+ N+LL
Sbjct: 130 ADLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTX 181
Query: 607 DAHVSDFGISKFLKPDSSN---WSEFVGTFGYVAP 638
D + DFG+++ PD + +E+V T Y AP
Sbjct: 182 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS 532
+G V KA+ + + VA+K+ S ++AF E++ L+ + H N+VK YG
Sbjct: 17 VGRGAFGVVCKAKWRA-KDVAIKQIESESE----RKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 533 FHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVH 592
+P L+ EY GSL +L + ++ M+ + ++Y+H ++H
Sbjct: 72 LNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 593 RDISSKNVLL--------------GLDYDAHVS-DFGISKFLKP---DSSNWSEFVGTFG 634
RD+ N+LL D H++ + G + ++ P + SN+SE F
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFS 189
Query: 635 Y 635
+
Sbjct: 190 W 190
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS 532
+G V KA+ + + VA+K+ S ++AF E++ L+ + H N+VK YG
Sbjct: 16 VGRGAFGVVCKAKWRA-KDVAIKQIESESE----RKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 533 FHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVH 592
+P L+ EY GSL +L + ++ M+ + ++Y+H ++H
Sbjct: 71 LNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 593 RDISSKNVLL--------------GLDYDAHVS-DFGISKFLKP---DSSNWSEFVGTFG 634
RD+ N+LL D H++ + G + ++ P + SN+SE F
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFS 188
Query: 635 Y 635
+
Sbjct: 189 W 189
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 19 FAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLS 78
F ++P ++ N +L +D+ NN++S + Q +T L L ++ N+LR PR L
Sbjct: 43 FTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLK 102
Query: 79 SLKQLVLYCNGLSGWLPSSFGN---LNNLAIGSMP 110
SL+ L L+ N +S +F + L++LAIG+ P
Sbjct: 103 SLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANP 137
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 16/127 (12%)
Query: 227 IPKSL-RNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRS 285
+PK + R+ T L +L+ N T E+ Y +LT +DLS N N S +N+T
Sbjct: 25 LPKGIPRDVTEL---YLDGNQFTLVPKELSN-YKHLTLIDLSNNRISTLSNQSFSNMT-- 78
Query: 286 IPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLE 345
QL L S N + P LKSL +L+GN + +S L
Sbjct: 79 ---------QLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALS 129
Query: 346 YLDLSTN 352
+L + N
Sbjct: 130 HLAIGAN 136
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRG-------SLAIILSNDAAIDE 562
F NE + E +VV+ G + + ++ E + RG SL ++N+ +
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 134
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
S + + + +A+ ++Y++ + F VHRD++++N ++ D+ + DFG+++
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 509 AFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL--AIILSNDAAIDEFSWT 566
A +E+ L +L H N++K Y F R +L+ E G L IIL +FS
Sbjct: 67 ALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ-----KFSEV 121
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKFLKPDS 623
++K V + +Y+H IVHRD+ +N+LL D + DFG+S +
Sbjct: 122 DAAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-G 177
Query: 624 SNWSEFVGTFGYVAP 638
E +GT Y+AP
Sbjct: 178 GKMKERLGTAYYIAP 192
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/179 (18%), Positives = 78/179 (43%), Gaps = 17/179 (9%)
Query: 462 RATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTEL 520
R +F+ C+G G V++A+ + A+K+ P+ ++ ++ E+KAL +L
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM-REVKALAKL 60
Query: 521 RHRNVVKFYGFSFHPRQS------------FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
H +V+++ + ++ + + +L ++ I+E +V
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS 627
+++ +A + ++H ++HRD+ N+ +D V DFG+ + D +
Sbjct: 121 LHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 473 IGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQA---FSNEIKALTELRHR 523
+G VY+ ++ PS VAVK P++ +Q F E +++ H+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL----PEVCSEQDELDFLMEALIISKFNHQ 85
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM----NVIKSVANTL 579
N+V+ G S F+L E + G L L ++ M +V + +A
Sbjct: 86 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 145
Query: 580 SYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISK 617
Y+ ++F +HRDI+++N LL G A + DFG+++
Sbjct: 146 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 473 IGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQA---FSNEIKALTELRHR 523
+G VY+ ++ PS VAVK P++ +Q F E +++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL----PEVCSEQDELDFLMEALIISKFNHQ 108
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM----NVIKSVANTL 579
N+V+ G S F+L E + G L L ++ M +V + +A
Sbjct: 109 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 580 SYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISK 617
Y+ ++F +HRDI+++N LL G A + DFG+++
Sbjct: 169 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 473 IGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQA---FSNEIKALTELRHR 523
+G VY+ ++ PS VAVK P++ +Q F E +++ H+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL----PEVCSEQDELDFLMEALIISKFNHQ 93
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM----NVIKSVANTL 579
N+V+ G S F+L E + G L L ++ M +V + +A
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 580 SYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISK 617
Y+ ++F +HRDI+++N LL G A + DFG+++
Sbjct: 154 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 473 IGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQA---FSNEIKALTELRHR 523
+G VY+ ++ PS VAVK P++ +Q F E +++ H+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL----PEVCSEQDELDFLMEALIISKFNHQ 111
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM----NVIKSVANTL 579
N+V+ G S F+L E + G L L ++ M +V + +A
Sbjct: 112 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 171
Query: 580 SYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISK 617
Y+ ++F +HRDI+++N LL G A + DFG+++
Sbjct: 172 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VAVK P + QAF E + L+H +V+ Y +++ EY+ +GSL
Sbjct: 40 VAVKTLK---PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLL 96
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L +D + ++ +A ++Y+ + +HRD+ + NVL+ ++
Sbjct: 97 DFLKSDEG-GKVLLPKLIDFSAQIAEGMAYIERKNY---IHRDLRAANVLVSESLMCKIA 152
Query: 612 DFGISKFLK 620
DFG+++ ++
Sbjct: 153 DFGLARVIE 161
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 473 IGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQA---FSNEIKALTELRHR 523
+G VY+ ++ PS VAVK P++ +Q F E +++ H+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL----PEVCSEQDELDFLMEALIISKFNHQ 134
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM----NVIKSVANTL 579
N+V+ G S F+L E + G L L ++ M +V + +A
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 580 SYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISK 617
Y+ ++F +HRDI+++N LL G A + DFG+++
Sbjct: 195 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRG-------SLAIILSNDAAIDE 562
F NE + E +VV+ G + + ++ E + RG SL ++N+ +
Sbjct: 65 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 124
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
S + + + +A+ ++Y++ + F VHRD++++N ++ D+ + DFG+++
Sbjct: 125 PSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 473 IGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQA---FSNEIKALTELRHR 523
+G VY+ ++ PS VAVK P++ +Q F E +++ H+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL----PEVCSEQDELDFLMEALIISKFNHQ 93
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM----NVIKSVANTL 579
N+V+ G S F+L E + G L L ++ M +V + +A
Sbjct: 94 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 580 SYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISK 617
Y+ ++F +HRDI+++N LL G A + DFG+++
Sbjct: 154 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 473 IGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQA---FSNEIKALTELRHR 523
+G VY+ ++ PS VAVK P++ +Q F E +++ H+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL----PEVCSEQDELDFLMEALIISKFNHQ 110
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM----NVIKSVANTL 579
N+V+ G S F+L E + G L L ++ M +V + +A
Sbjct: 111 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 170
Query: 580 SYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISK 617
Y+ ++F +HRDI+++N LL G A + DFG+++
Sbjct: 171 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 10/130 (7%)
Query: 512 NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNV 571
E+ L L H N++K Y F R +L+ E G L + + +E V +
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---I 141
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLL-GLDYDA--HVSDFGISKFLKPDSSNWSE 628
IK V + ++Y+H IVHRD+ +N+LL + DA + DFG+S + + E
Sbjct: 142 IKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKE 197
Query: 629 FVGTFGYVAP 638
+GT Y+AP
Sbjct: 198 RLGTAYYIAP 207
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 11/170 (6%)
Query: 473 IGTAGQASVYKAELP----SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
+ T G+ + K +L + VA+K + Q E++ + L H N+VK
Sbjct: 17 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 76
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+ + +L+ EY G + L + E + + + + + Y H
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF---RQIVSAVQYCHQKR-- 131
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
IVHRD+ ++N+LL D + ++DFG S F G+ Y AP
Sbjct: 132 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDTFCGSPPYAAP 179
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 473 IGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQA---FSNEIKALTELRHR 523
+G VY+ ++ PS VAVK P++ +Q F E +++ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL----PEVCSEQDELDFLMEALIISKFNHQ 94
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM----NVIKSVANTL 579
N+V+ G S F+L E + G L L ++ M +V + +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 580 SYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISK 617
Y+ ++F +HRDI+++N LL G A + DFG+++
Sbjct: 155 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 457 YEEVIRATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVK-----KFHSPHPDMVVQQAF 510
Y+E+++ ++ IGT G A V A + + E+VA+K S P +
Sbjct: 5 YDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRI------ 55
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL-AIILSNDAAIDEFSWTVRM 569
EI+AL LRH+++ + Y + F++ EY G L I+S D +E + V
Sbjct: 56 KTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR 115
Query: 570 NVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS-NWSE 628
++ +VA Y+H + HRD+ +N+L + + DFG+ K + +
Sbjct: 116 QIVSAVA----YVHSQGY---AHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT 168
Query: 629 FVGTFGYVAP 638
G+ Y AP
Sbjct: 169 CCGSLAYAAP 178
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 11/170 (6%)
Query: 473 IGTAGQASVYKAELP----SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
+ T G+ + K +L + VA+K + Q E++ + L H N+VK
Sbjct: 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+ + +L+ EY G + L + E + + + + + Y H
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF---RQIVSAVQYCHQKR-- 134
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
IVHRD+ ++N+LL D + ++DFG S F G Y AP
Sbjct: 135 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGAPPYAAP 182
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 473 IGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQA---FSNEIKALTELRHR 523
+G VY+ ++ PS VAVK P++ +Q F E +++ H+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL----PEVCSEQDELDFLMEALIISKFNHQ 100
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM----NVIKSVANTL 579
N+V+ G S F+L E + G L L ++ M +V + +A
Sbjct: 101 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 160
Query: 580 SYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISK 617
Y+ ++F +HRDI+++N LL G A + DFG+++
Sbjct: 161 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRG-------SLAIILSNDAAIDE 562
F NE + E +VV+ G + + ++ E + RG SL + N+ +
Sbjct: 60 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 119
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
S + + + +A+ ++Y++ + F VHRD++++N ++ D+ + DFG+++
Sbjct: 120 PSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 473 IGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQA---FSNEIKALTELRHR 523
+G VY+ ++ PS VAVK P++ +Q F E +++ H+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL----PEVCSEQDELDFLMEALIISKFNHQ 120
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM----NVIKSVANTL 579
N+V+ G S F+L E + G L L ++ M +V + +A
Sbjct: 121 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 180
Query: 580 SYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISK 617
Y+ ++F +HRDI+++N LL G A + DFG+++
Sbjct: 181 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 473 IGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQA---FSNEIKALTELRHR 523
+G VY+ ++ PS VAVK P++ +Q F E +++ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL----PEVCSEQDELDFLMEALIISKFNHQ 94
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM----NVIKSVANTL 579
N+V+ G S F+L E + G L L ++ M +V + +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 580 SYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISK 617
Y+ ++F +HRDI+++N LL G A + DFG+++
Sbjct: 155 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 467 FDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVV 526
+D + +GT + V AE + + K + + + NEI L +++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 527 KFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVR--MNVIKSVANTLSYMHH 584
+L+ + + G L D +++ +T R +I V + + Y+H
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 585 DYFPPIVHRDISSKNVLL-GLDYDAHV--SDFGISKFLKPDSSNWSEFVGTFGYVAP 638
IVHRD+ +N+L LD D+ + SDFG+SK P S S GT GYVAP
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTACGTPGYVAP 187
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
Query: 506 VQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSW 565
+Q EI L LRH +++K Y + ++ EY G I+ D ++ +
Sbjct: 47 MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR 106
Query: 566 TVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN 625
+I +V Y H IVHRD+ +N+LL + ++DFG+S + D +
Sbjct: 107 RFFQQIISAV----EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNF 158
Query: 626 WSEFVGTFGYVAP 638
G+ Y AP
Sbjct: 159 LKTSCGSPNYAAP 171
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
Query: 506 VQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSW 565
+Q EI L LRH +++K Y + ++ EY G I+ D ++ +
Sbjct: 51 MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR 110
Query: 566 TVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN 625
+I +V Y H IVHRD+ +N+LL + ++DFG+S + D +
Sbjct: 111 RFFQQIISAV----EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNF 162
Query: 626 WSEFVGTFGYVAP 638
G+ Y AP
Sbjct: 163 LKTSCGSPNYAAP 175
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
Query: 506 VQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSW 565
+Q EI L LRH +++K Y + ++ EY G I+ D ++ +
Sbjct: 57 MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR 116
Query: 566 TVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN 625
+I +V Y H IVHRD+ +N+LL + ++DFG+S + D +
Sbjct: 117 RFFQQIISAV----EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNF 168
Query: 626 WSEFVGTFGYVAP 638
G+ Y AP
Sbjct: 169 LKTSCGSPNYAAP 181
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
Query: 506 VQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSW 565
+Q EI L LRH +++K Y + ++ EY G I+ D ++ +
Sbjct: 56 MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR 115
Query: 566 TVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN 625
+I +V Y H IVHRD+ +N+LL + ++DFG+S + D +
Sbjct: 116 RFFQQIISAV----EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNF 167
Query: 626 WSEFVGTFGYVAP 638
G+ Y AP
Sbjct: 168 LKTSCGSPNYAAP 180
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRG-------SLAIILSNDAAIDE 562
F NE + E +VV+ G + + ++ E + RG SL + N+ +
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
S + + + +A+ ++Y++ + F VHRD++++N ++ D+ + DFG+++
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRG-------SLAIILSNDAAIDE 562
F NE + E +VV+ G + + ++ E + RG SL + N+ +
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 134
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
S + + + +A+ ++Y++ + F VHRD++++N ++ D+ + DFG+++
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRG-------SLAIILSNDAAIDE 562
F NE + E +VV+ G + + ++ E + RG SL + N+ +
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
S + + + +A+ ++Y++ + F VHRD++++N ++ D+ + DFG+++
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRG-------SLAIILSNDAAIDE 562
F NE + E +VV+ G + + ++ E + RG SL + N+ +
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
S + + + +A+ ++Y++ + F VHRD++++N ++ D+ + DFG+++
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 11/170 (6%)
Query: 473 IGTAGQASVYKAELP----SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
+ T G+ + K +L + + VAVK + Q E++ L H N+VK
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKL 78
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+ + +L+ EY G + L E + + + + + Y H +
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF---RQIVSAVQYCHQKF-- 133
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
IVHRD+ ++N+LL D + ++DFG S + F G Y AP
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEFTF-GNKLDAFCGAPPYAAP 181
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 473 IGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQA---FSNEIKALTELRHR 523
+G VY+ ++ PS VAVK P++ +Q F E +++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL----PEVYSEQDELDFLMEALIISKFNHQ 108
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM----NVIKSVANTL 579
N+V+ G S F+L E + G L L ++ M +V + +A
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 580 SYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISK 617
Y+ ++F +HRDI+++N LL G A + DFG+++
Sbjct: 169 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VAVK P + QAF E + L+H +V+ Y +++ E++ +GSL
Sbjct: 39 VAVKTLK---PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLL 95
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L +D + ++ +A ++Y+ + +HRD+ + NVL+ ++
Sbjct: 96 DFLKSDEG-GKVLLPKLIDFSAQIAEGMAYIERKNY---IHRDLRAANVLVSESLMCKIA 151
Query: 612 DFGISKFLK 620
DFG+++ ++
Sbjct: 152 DFGLARVIE 160
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRG-------SLAIILSNDAAIDE 562
F NE + E +VV+ G + + ++ E + RG SL + N+ +
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
S + + + +A+ ++Y++ + F VHRD++++N ++ D+ + DFG+++
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRG-------SLAIILSNDAAIDE 562
F NE + E +VV+ G + + ++ E + RG SL + N+ +
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
S + + + +A+ ++Y++ + F VHRD++++N ++ D+ + DFG+++
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
NF IG VYKA + E+VA+KK V EI L EL H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+VK + +L++E+L + + + +A+ + + + + LS+ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ ++ V T Y AP
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 10/170 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKF---HSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
+G A+VYKA + + +IVA+KK H + + EIK L EL H N++
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
H L+++++ L +I+ +++ + S ++ ++ ++ L Y+H +
Sbjct: 78 LDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPS-HIKAYMLMTLQG-LEYLHQHW-- 132
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+LL + ++DFG++K + + V T Y AP
Sbjct: 133 -ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAP 181
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 18/171 (10%)
Query: 474 GTAGQASVYKAELPSWEIVAVK----KFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFY 529
G AG+ + + E VAVK K P+ + ++ N++ L H NVVKFY
Sbjct: 17 GAAGEVQLAVNRVTE-EAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVKFY 70
Query: 530 GFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
G +L EY G L + D + E + + Y+H
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLHGIG--- 124
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVAP 638
I HRDI +N+LL + +SDFG++ + ++ ++ GT YVAP
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 473 IGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG +V+KA+ + EIVA+K+ D V + EI L EL+H+N+V+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 532 SFHPRQSFLLYEYLGRGSLAIILSNDAAID-EFSWTVRMNVIKSVANTLSYMHHDYFPPI 590
++ L++E+ + S + +D E + ++K L + H +
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG----LGFCHSRN---V 122
Query: 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+HRD+ +N+L+ + + +++FG+++ +S V T Y P
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPP 170
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRG-------SLAIILSNDAAIDE 562
F NE + E +VV+ G + + ++ E + RG SL + N+ +
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
S + + + +A+ ++Y++ + F VHRD++++N ++ D+ + DFG+++
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 467 FDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVV 526
+D + +GT + V AE + + K + + + NEI L +++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 527 KFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVR--MNVIKSVANTLSYMHH 584
+L+ + + G L D +++ +T R +I V + + Y+H
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 585 DYFPPIVHRDISSKNVLL-GLDYDAHV--SDFGISKFLKPDSSNWSEFVGTFGYVAP 638
IVHRD+ +N+L LD D+ + SDFG+SK P S S GT GYVAP
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTACGTPGYVAP 187
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 472 CIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
C+G V++ L E VAVK F S ++ EI LRH N++ F
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE---TEIYNTVLLRHDNILGFIAS 70
Query: 532 SFHPRQS----FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYF 587
R S +L+ Y GSL L E +R+ V S A L+++H + F
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTL--EPHLALRLAV--SAACGLAHLHVEIF 126
Query: 588 -----PPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEF-----VGTFGYVA 637
P I HRD S+NVL+ + ++D G++ + S++ + VGT Y+A
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 638 P 638
P
Sbjct: 186 P 186
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 55 VAIKKI-SPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 113
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIC 170
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAP 200
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRG--- 548
VA+K + M + F NE + E +VV+ G + + ++ E + RG
Sbjct: 80 VAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 138
Query: 549 ----SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL 604
SL + N+ + S + + + +A+ ++Y++ + F VHRD++++N ++
Sbjct: 139 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAE 195
Query: 605 DYDAHVSDFGISK 617
D+ + DFG+++
Sbjct: 196 DFTVKIGDFGMTR 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 117
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 638 P 638
P
Sbjct: 175 P 175
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 467 FDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVV 526
+D + +GT + V AE + + K + + + NEI L +++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 527 KFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVR--MNVIKSVANTLSYMHH 584
+L+ + + G L D +++ +T R +I V + + Y+H
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 585 DYFPPIVHRDISSKNVLL-GLDYDAHV--SDFGISKFLKPDSSNWSEFVGTFGYVAP 638
IVHRD+ +N+L LD D+ + SDFG+SK P S S GT GYVAP
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTACGTPGYVAP 187
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 118
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 638 P 638
P
Sbjct: 176 P 176
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 118
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 638 P 638
P
Sbjct: 176 P 176
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 117
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 638 P 638
P
Sbjct: 175 P 175
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 510 FSNEIKALTELRHR-NVVKFYGFSFHPRQSFLLYEYLGRGSL------AIILSNDAAI-- 560
F+ E++ L +L H N++ G H +L EY G+L + +L D A
Sbjct: 62 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 121
Query: 561 -----DEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGI 615
S ++ VA + Y+ F +HRD++++N+L+G +Y A ++DFG+
Sbjct: 122 ANSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGL 178
Query: 616 SK 617
S+
Sbjct: 179 SR 180
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 55 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 113
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 114 TDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 170
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAP 200
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 117
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 638 P 638
P
Sbjct: 175 P 175
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTV 567
+ EI L H NVVKFYG +L EY G L + D + E
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--- 105
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN-- 625
+ + Y+H I HRDI +N+LL + +SDFG++ + ++
Sbjct: 106 AQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 626 WSEFVGTFGYVAP 638
++ GT YVAP
Sbjct: 163 LNKMCGTLPYVAP 175
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 510 FSNEIKALTELRHR-NVVKFYGFSFHPRQSFLLYEYLGRGSL------AIILSNDAAI-- 560
F+ E++ L +L H N++ G H +L EY G+L + +L D A
Sbjct: 72 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 131
Query: 561 -----DEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGI 615
S ++ VA + Y+ F +HRD++++N+L+G +Y A ++DFG+
Sbjct: 132 ANSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGL 188
Query: 616 SK 617
S+
Sbjct: 189 SR 190
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 118
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 638 P 638
P
Sbjct: 176 P 176
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 117
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 638 P 638
P
Sbjct: 175 P 175
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 467 FDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVV 526
+D + +GT + V AE + + K + + + NEI L +++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 527 KFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVR--MNVIKSVANTLSYMHH 584
+L+ + + G L D +++ +T R +I V + + Y+H
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 585 DYFPPIVHRDISSKNVLL-GLDYDAHV--SDFGISKFLKPDSSNWSEFVGTFGYVAP 638
IVHRD+ +N+L LD D+ + SDFG+SK P S S GT GYVAP
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTACGTPGYVAP 187
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 118
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 638 P 638
P
Sbjct: 176 P 176
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 118
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 638 P 638
P
Sbjct: 176 P 176
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 118
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 638 P 638
P
Sbjct: 176 P 176
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 117
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 638 P 638
P
Sbjct: 175 P 175
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 49 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 107
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 108 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 164
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAP 194
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 116
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 117 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 173
Query: 638 P 638
P
Sbjct: 174 P 174
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 59 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 117
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 118 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 174
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 175 DFGLARVADPDHDHTGFLTEYVATRWYRAP 204
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 51 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 109
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 166
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAP 196
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 55 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 113
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIC 170
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAP 200
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 49 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 107
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 108 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 164
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAP 194
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 56 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 114
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 115 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 171
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 172 DFGLARVADPDHDHTGFLTEYVATRWYRAP 201
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 57 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 115
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 116 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 172
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 173 DFGLARVADPDHDHTGFLTEYVATRWYRAP 202
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 48 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 106
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 107 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 163
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 164 DFGLARVADPDHDHTGFLTEYVATRWYRAP 193
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 55 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 113
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 170
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAP 200
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 71 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 129
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 130 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 186
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVATRWYRAP 216
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTV 567
+ EI L H NVVKFYG +L EY G L + D + E
Sbjct: 50 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--- 106
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN-- 625
+ + Y+H I HRDI +N+LL + +SDFG++ + ++
Sbjct: 107 AQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163
Query: 626 WSEFVGTFGYVAP 638
++ GT YVAP
Sbjct: 164 LNKMXGTLPYVAP 176
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 51 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 109
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 166
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAP 196
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 51 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 109
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIC 166
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAP 196
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
+ + NEI L +++H N+V P +L+ + + G L D +++ +T
Sbjct: 64 ESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELF-----DRIVEKGFYT 118
Query: 567 VR--MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVL-LGLDYDAH--VSDFGISKFLKP 621
+ +I+ V + + Y+H IVHRD+ +N+L D ++ +SDFG+SK ++
Sbjct: 119 EKDASTLIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEG 174
Query: 622 DSSNWSEFVGTFGYVAP 638
S GT GYVAP
Sbjct: 175 KGDVMSTACGTPGYVAP 191
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 53 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 111
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 112 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 168
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAP 198
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 118
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW--SEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 638 P 638
P
Sbjct: 176 P 176
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Query: 512 NEIKALTELRHRNVVKF-YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
E + L RH + Y F H R F++ EY G L LS + F+
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV---FTEERARF 109
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFV 630
+ + L Y+H +V+RDI +N++L D ++DFG+ K D + F
Sbjct: 110 YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
Query: 631 GTFGYVAP 638
GT Y+AP
Sbjct: 167 GTPEYLAP 174
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 51 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 109
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIC 166
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAP 196
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFS 564
+++ E++ L +L H N+ K Y F F + F L Y G I+S FS
Sbjct: 70 KESLLREVQLLKQLDHPNIXKLYEF-FEDKGYFYLVGEVYTGGELFDEIISR----KRFS 124
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKFLKP 621
+I+ V + ++Y H + IVHRD+ +N+LL D + + DFG+S +
Sbjct: 125 EVDAARIIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181
Query: 622 DSSNWSEFVGTFGYVAP 638
S + +GT Y+AP
Sbjct: 182 -SKKXKDKIGTAYYIAP 197
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E+L + + + +A+ + + + + L++
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ ++ V T Y AP
Sbjct: 120 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 173
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Query: 512 NEIKALTELRHRNVVKF-YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
E + L RH + Y F H R F++ EY G L LS + F+
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV---FTEERARF 109
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFV 630
+ + L Y+H +V+RDI +N++L D ++DFG+ K D + F
Sbjct: 110 YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 166
Query: 631 GTFGYVAP 638
GT Y+AP
Sbjct: 167 GTPEYLAP 174
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF-SFHPRQSFLLYEYLGRGSL 550
VA+K P + ++F E + + +L+H +V+ Y S P +++ EY+ +GSL
Sbjct: 36 VAIKTLK---PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEP--IYIVTEYMNKGSL 90
Query: 551 AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHV 610
L D +++ VA ++Y+ + +HRD+ S N+L+G +
Sbjct: 91 LDFL-KDGEGRALKLPNLVDMAAQVAAGMAYIERMNY---IHRDLRSANILVGNGLICKI 146
Query: 611 SDFGISKFLK 620
+DFG+++ ++
Sbjct: 147 ADFGLARLIE 156
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 117
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW--SEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 638 P 638
P
Sbjct: 175 P 175
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Query: 512 NEIKALTELRHRNVVKF-YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
E + L RH + Y F H R F++ EY G L LS + F+
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV---FTEERARF 109
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFV 630
+ + L Y+H +V+RDI +N++L D ++DFG+ K D + F
Sbjct: 110 YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 166
Query: 631 GTFGYVAP 638
GT Y+AP
Sbjct: 167 GTPEYLAP 174
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Query: 512 NEIKALTELRHRNVVKF-YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
E + L RH + Y F H R F++ EY G L LS + F+
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV---FTEERARF 109
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFV 630
+ + L Y+H +V+RDI +N++L D ++DFG+ K D + F
Sbjct: 110 YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
Query: 631 GTFGYVAP 638
GT Y+AP
Sbjct: 167 GTPEYLAP 174
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTV 567
+ EI L H NVVKFYG +L EY G L + D + E
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--- 105
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN-- 625
+ + Y+H I HRDI +N+LL + +SDFG++ + ++
Sbjct: 106 AQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 162
Query: 626 WSEFVGTFGYVAP 638
++ GT YVAP
Sbjct: 163 LNKMXGTLPYVAP 175
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
NF IG VYKA + E+VA+KK V EI L EL H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+VK + +L++E+L + + + +A+ + + + + L++ H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ ++ V T Y AP
Sbjct: 128 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 117
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 638 P 638
P
Sbjct: 175 P 175
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
NF IG VYKA + E+VA+KK V EI L EL H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+VK + +L++E+L + + + +A+ + + + + L++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ ++ V T Y AP
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
NF IG VYKA + E+VA+KK V EI L EL H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+VK + +L++E+L + + + +A+ + + + + L++ H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ ++ V T Y AP
Sbjct: 128 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Query: 512 NEIKALTELRHRNVVKF-YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
E + L RH + Y F H R F++ EY G L LS + F+
Sbjct: 59 TESRVLQNTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV---FTEERARF 114
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFV 630
+ + L Y+H +V+RDI +N++L D ++DFG+ K D + F
Sbjct: 115 YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 171
Query: 631 GTFGYVAP 638
GT Y+AP
Sbjct: 172 GTPEYLAP 179
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
NF IG VYKA + E+VA+KK V EI L EL H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+VK + +L++E+L + + + +A+ + + + + L++ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ ++ V T Y AP
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Query: 512 NEIKALTELRHRNVVKF-YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
E + L RH + Y F H R F++ EY G L LS + F+
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV---FTEERARF 112
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFV 630
+ + L Y+H +V+RDI +N++L D ++DFG+ K D + F
Sbjct: 113 YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 169
Query: 631 GTFGYVAP 638
GT Y+AP
Sbjct: 170 GTPEYLAP 177
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
NF IG VYKA + E+VA+KK V EI L EL H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+VK + +L++E+L + + + +A+ + + + + L++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ ++ V T Y AP
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Query: 512 NEIKALTELRHRNVVKF-YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
E + L RH + Y F H R F++ EY G L LS + F+
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV---FTEERARF 109
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFV 630
+ + L Y+H +V+RDI +N++L D ++DFG+ K D + F
Sbjct: 110 YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
Query: 631 GTFGYVAP 638
GT Y+AP
Sbjct: 167 GTPEYLAP 174
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRG-------SLAIILSNDAAIDE 562
F NE + E +VV+ G + + ++ E + RG SL + N+ +
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
S + + + +A+ ++Y++ + F VHRD++++N + D+ + DFG+++
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
NF IG VYKA + E+VA+KK V EI L EL H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+VK + +L++E+L + + + +A+ + + + + L++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ ++ V T Y AP
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 117
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 638 P 638
P
Sbjct: 175 P 175
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
NF IG VYKA + E+VA+KK V EI L EL H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+VK + +L++E+L + + + +A+ + + + + L++ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ ++ V T Y AP
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR-HRNVVKFYG 530
+G V+K+ + + E+VAVKK + Q EI LTEL H N+V
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 531 F--SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+ + R +L+++Y+ A+I +N + V+ + + Y+H
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSG--- 128
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++HRD+ N+LL + V+DFG+S+
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
L H NVVKFYG +L EY G L + D + E + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGV 117
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVA 637
Y+H I HRDI +N+LL + +SDFG++ + ++ ++ GT YVA
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 638 P 638
P
Sbjct: 175 P 175
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
NF IG VYKA + E+VA+KK V EI L EL H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+VK + +L++E+L + + + +A+ + + + + L++ H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ ++ V T Y AP
Sbjct: 125 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 176
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 485 ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544
++P+ + A K ++ Q E + L+H N+V+ + +L+++
Sbjct: 25 KIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDL 84
Query: 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL 604
+ G L + A + +S + I+ + ++++ H IVHRD+ +N+LL
Sbjct: 85 VTGGEL---FEDIVAREYYSEADASHCIQQILESVNHCH---LNGIVHRDLKPENLLLAS 138
Query: 605 DYDA---HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++DFG++ ++ D W F GT GY++P
Sbjct: 139 KSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 53 VAIKKI-SPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 111
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 112 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 168
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAP 198
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
Y F H R F++ EY G L LS + FS + + L Y+H +
Sbjct: 75 YSFQTHDRLCFVM-EYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSE--K 128
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+V+RD+ +N++L D ++DFG+ K D + F GT Y+AP
Sbjct: 129 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 178
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
Y F H R F++ EY G L LS + FS + + L Y+H +
Sbjct: 76 YSFQTHDRLCFVM-EYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSE--K 129
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+V+RD+ +N++L D ++DFG+ K D + F GT Y+AP
Sbjct: 130 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 179
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 51 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 109
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIX 166
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAP 196
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
Y F H R F++ EY G L LS + FS + + L Y+H +
Sbjct: 218 YSFQTHDRLCFVM-EYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSE--K 271
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+V+RD+ +N++L D ++DFG+ K D + F GT Y+AP
Sbjct: 272 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAP 321
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
Y F H R F++ EY G L LS + FS + + L Y+H +
Sbjct: 77 YSFQTHDRLCFVM-EYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSE--K 130
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+V+RD+ +N++L D ++DFG+ K D + F GT Y+AP
Sbjct: 131 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 180
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 529 YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
Y F H R F++ EY G L LS + FS + + L Y+H +
Sbjct: 215 YSFQTHDRLCFVM-EYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSE--K 268
Query: 589 PIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+V+RD+ +N++L D ++DFG+ K D + F GT Y+AP
Sbjct: 269 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAP 318
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 485 ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544
++P+ + A K ++ Q E + L+H N+V+ + +L+++
Sbjct: 25 KIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDL 84
Query: 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL 604
+ G L + A + +S + I+ + L ++H + IVHRD+ +N+LL
Sbjct: 85 VTGGEL---FEDIVAREYYSEADASHCIQQI---LESVNHCHLNGIVHRDLKPENLLLAS 138
Query: 605 DYDA---HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++DFG++ ++ D W F GT GY++P
Sbjct: 139 KSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 14/142 (9%)
Query: 492 VAVKKFHS-PHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK S H D ++A +E+K ++ L +H N+V G H ++ EY G
Sbjct: 71 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 128
Query: 550 LAIILSNDAAIDEFSWTVR-------MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL 602
L L A D R ++ VA ++++ +HRD++++NVLL
Sbjct: 129 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 185
Query: 603 GLDYDAHVSDFGISKFLKPDSS 624
+ A + DFG+++ + DS+
Sbjct: 186 TNGHVAKIGDFGLARDIMNDSN 207
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGF----SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEF 563
Q E + +L+H N+V+ + SFH +L+++ + G L + A + +
Sbjct: 73 QKLEREARICRKLQHPNIVRLHDSIQEESFH----YLVFDLVTGGEL---FEDIVAREFY 125
Query: 564 SWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA---HVSDFGISKFLK 620
S + I+ + +++Y H + IVHR++ +N+LL ++DFG++ +
Sbjct: 126 SEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182
Query: 621 PDSSNWSEFVGTFGYVAP 638
DS W F GT GY++P
Sbjct: 183 -DSEAWHGFAGTPGYLSP 199
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E+L + + + +A+ + + + + L++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFM--DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 122 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA++K SP Q EIK L RH N++ P + Y+ + +
Sbjct: 55 VAIRKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 113
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 170
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAP 200
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 22/176 (12%)
Query: 458 EEVIRATNNFDAKYCIGTAGQASVYKAELP----SWEIVAVKKFHSPHPDMVVQ---QAF 510
E+V+ F +G SV +A+L S+ VAVK + D++ + F
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKA---DIIASSDIEEF 72
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQS------FLLYEYLGRGSL-AIILSNDAAIDEF 563
E + E H +V K G S R ++ ++ G L A +L++ + F
Sbjct: 73 LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF 132
Query: 564 SWTVRMNV--IKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ ++ V + +A + Y+ F +HRD++++N +L D V+DFG+S+
Sbjct: 133 NLPLQTLVRFMVDIACGMEYLSSRNF---IHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN--VVKFYG 530
IG+ G + V++ +I A+K + D ++ NEI L +L+ + +++ Y
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 531 FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPI 590
+ + +++ E G L L +ID + R + K N L +H + I
Sbjct: 80 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE---RKSYWK---NMLEAVHTIHQHGI 132
Query: 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVAP 638
VH D+ N L+ +D + DFGI+ ++PD+++ VGT Y+ P
Sbjct: 133 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 181
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 23/190 (12%)
Query: 464 TNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRH 522
+++F K +G V A P+ EIVA+KK P + EIK L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKH 68
Query: 523 RNVVKFYGF----SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANT 578
N++ + SF + + L + L ++S D+ +++V
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV--- 125
Query: 579 LSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS----------E 628
+H ++HRD+ N+L+ + D V DFG+++ + +++ S E
Sbjct: 126 -KVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 629 FVGTFGYVAP 638
FV T Y AP
Sbjct: 182 FVATRWYRAP 191
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E+L + + + +A+ + + + + L++
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 123 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 176
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN--VVKFYG 530
IG+ G + V++ +I A+K + D ++ NEI L +L+ + +++ Y
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 531 FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPI 590
+ + +++ E G L L +ID + R + K N L +H + I
Sbjct: 76 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE---RKSYWK---NMLEAVHTIHQHGI 128
Query: 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVAP 638
VH D+ N L+ +D + DFGI+ ++PD+++ VGT Y+ P
Sbjct: 129 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 177
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E+L + + + +A+ + + + + L++
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 120 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E+L + + + +A+ + + + + L++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 122 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 14/142 (9%)
Query: 492 VAVKKFHS-PHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK S H D ++A +E+K ++ L +H N+V G H ++ EY G
Sbjct: 79 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 550 LAIILSNDAAIDEFSWTVR-------MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL 602
L L A D R ++ VA ++++ +HRD++++NVLL
Sbjct: 137 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 193
Query: 603 GLDYDAHVSDFGISKFLKPDSS 624
+ A + DFG+++ + DS+
Sbjct: 194 TNGHVAKIGDFGLARDIMNDSN 215
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E+L + + + +A+ + + + + L++
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 121 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E+L + + + +A+ + + + + L++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 122 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E+L + + + +A+ + + + + L++
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 121 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 53 VAIKKI-SPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 111
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 112 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKIC 168
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + +E+V T Y AP
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAP 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E+L + + + +A+ + + + + L++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 474 GTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS 532
GT G+ VYKA + + E VA+K+ H + V E+ L EL+HRN+++
Sbjct: 45 GTYGE--VYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVI 102
Query: 533 FHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKS----VANTLSYMHHDYFP 588
H + L++EY L + + V M VIKS + N +++ H
Sbjct: 103 HHNHRLHLIFEY-AENDLKKYMDKNP-------DVSMRVIKSFLYQLINGVNFCHSRR-- 152
Query: 589 PIVHRDISSKNVLLGLDYDA------HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+HRD+ +N+LL + DA + DFG+++ ++ + T Y P
Sbjct: 153 -CLHRDLKPQNLLLSVS-DASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPP 206
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 6/175 (3%)
Query: 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
NF IG VYKA + E+VA+KK V EI L EL H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+VK + +L++E+L + + + +A+ + + + + L++ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTV 567
Q E + L+H N+V+ + +L+++ + G L + A + +S
Sbjct: 75 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEAD 131
Query: 568 RMNVIKSVANTLSYMH-HDYFPPIVHRDISSKNVLLGLDYDA---HVSDFGISKFLKPDS 623
+ I + +++++H HD IVHRD+ +N+LL ++DFG++ ++ +
Sbjct: 132 ASHCIHQILESVNHIHQHD----IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ 187
Query: 624 SNWSEFVGTFGYVAP 638
W F GT GY++P
Sbjct: 188 QAWFGFAGTPGYLSP 202
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 459 EVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVK--KFHSPHPDMVVQQAFSNEIKA 516
EV R T + G AG+ V+ VAVK K S PD AF E
Sbjct: 9 EVPRETLKLVERLGAGQAGE--VWMGYYNGHTKVAVKSLKQGSMSPD-----AFLAEANL 61
Query: 517 LTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVA 576
+ +L+H+ +V+ Y +++ EY+ GSL L + I + + +++ +A
Sbjct: 62 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIA 119
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620
++++ + +HRD+ + N+L+ ++DFG+++ ++
Sbjct: 120 EGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIE 160
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E+L + + + +A+ + + + + L++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E+L + + + +A+ + + + + L++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 6/175 (3%)
Query: 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
NF IG VYKA + E+VA+KK V EI L EL H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+VK + +L++E+L + + + +A+ + + + + L++ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 29/203 (14%)
Query: 441 GDVKLFSILTFEGKILY------EEVIRATNNF----DAKYCI--------GTAGQASVY 482
GD +L+ F G Y E+ RA + F DA CI G G+
Sbjct: 4 GDEELYFHFKFPGTKTYIDPETYEDPNRAVHQFAKELDAS-CIKIERVIGAGEFGEVCSG 62
Query: 483 KAELPSWE--IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFL 540
+ +LP VA+K + + ++ F E + + H NVV G + +
Sbjct: 63 RLKLPGKRDVAVAIKTLKVGYTEKQ-RRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMI 121
Query: 541 LYEYLGRGSL-AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKN 599
+ E++ G+L A + +D +F+ + +++ +A + Y+ + VHRD++++N
Sbjct: 122 VIEFMENGALDAFLRKHDG---QFTVIQLVGMLRGIAAGMRYLADMGY---VHRDLAARN 175
Query: 600 VLLGLDYDAHVSDFGISKFLKPD 622
+L+ + VSDFG+S+ ++ D
Sbjct: 176 ILVNSNLVCKVSDFGLSRVIEDD 198
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E+L + + + +A+ + + + + L++
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 121 CHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 6/175 (3%)
Query: 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
NF IG VYKA + E+VA+KK V EI L EL H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+VK + +L++E+L + + + +A+ + + + + L++ H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 122 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E+L + + + +A+ + + + + L++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 16/182 (8%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT-VRMNVIKS----VA 576
H N+VK + +L++E+L + +D + T + + +IKS +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLS-------MDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYV 636
L++ H ++HRD+ +N+L+ + ++DFG+++ + V T Y
Sbjct: 115 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
Query: 637 AP 638
AP
Sbjct: 172 AP 173
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 16/182 (8%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT-VRMNVIKS----VA 576
H N+VK + +L++E+L + +D + T + + +IKS +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLS-------MDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYV 636
L++ H ++HRD+ +N+L+ + ++DFG+++ + V T Y
Sbjct: 117 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 637 AP 638
AP
Sbjct: 174 AP 175
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E+L + + + +A+ + + + + L++
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 120 CHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN--VVKFYG 530
IG+ G + V++ +I A+K + D ++ NEI L +L+ + +++ Y
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 531 FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPI 590
+ + +++ E G L L +ID + R + K N L +H + I
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE---RKSYWK---NMLEAVHTIHQHGI 148
Query: 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVAP 638
VH D+ N L+ +D + DFGI+ ++PD+++ VGT Y+ P
Sbjct: 149 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 197
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN--VVKFYG 530
IG+ G + V++ +I A+K + D ++ NEI L +L+ + +++ Y
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 531 FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPI 590
+ + +++ E G L L +ID + R + K N L +H + I
Sbjct: 77 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE---RKSYWK---NMLEAVHTIHQHGI 129
Query: 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVAP 638
VH D+ N L+ +D + DFGI+ ++PD+++ VGT Y+ P
Sbjct: 130 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 178
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGF----SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEF 563
Q E + +L+H N+V+ + SFH +L+++ + G L + A + +
Sbjct: 50 QKLEREARICRKLQHPNIVRLHDSIQEESFH----YLVFDLVTGGEL---FEDIVAREFY 102
Query: 564 SWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA---HVSDFGISKFLK 620
S + I+ + +++Y H + IVHR++ +N+LL ++DFG++ +
Sbjct: 103 SEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159
Query: 621 PDSSNWSEFVGTFGYVAP 638
DS W F GT GY++P
Sbjct: 160 -DSEAWHGFAGTPGYLSP 176
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 16/182 (8%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT-VRMNVIKS----VA 576
H N+VK + +L++E+L + +D + T + + +IKS +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLS-------MDLKDFMDASALTGIPLPLIKSYLFQLL 116
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYV 636
L++ H ++HRD+ +N+L+ + ++DFG+++ + V T Y
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 637 AP 638
AP
Sbjct: 174 AP 175
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGF----SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEF 563
Q E + +L+H N+V+ + SFH +L+++ + G L + A + +
Sbjct: 49 QKLEREARICRKLQHPNIVRLHDSIQEESFH----YLVFDLVTGGEL---FEDIVAREFY 101
Query: 564 SWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA---HVSDFGISKFLK 620
S + I+ + +++Y H + IVHR++ +N+LL ++DFG++ +
Sbjct: 102 SEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 158
Query: 621 PDSSNWSEFVGTFGYVAP 638
DS W F GT GY++P
Sbjct: 159 -DSEAWHGFAGTPGYLSP 175
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGF----SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEF 563
Q E + +L+H N+V+ + SFH +L+++ + G L + A + +
Sbjct: 50 QKLEREARICRKLQHPNIVRLHDSIQEESFH----YLVFDLVTGGEL---FEDIVAREFY 102
Query: 564 SWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA---HVSDFGISKFLK 620
S + I+ + +++Y H + IVHR++ +N+LL ++DFG++ +
Sbjct: 103 SEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159
Query: 621 PDSSNWSEFVGTFGYVAP 638
DS W F GT GY++P
Sbjct: 160 -DSEAWHGFAGTPGYLSP 176
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS--FLLYEYLGRGSLAIILSNDAAIDEFSWTV 567
EI+ L L H N+VK+ G + L+ E+L GSL L + ++ +
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK--NKINLKQ 127
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
++ + + Y+ + VHRD++++NVL+ ++ + DFG++K ++ D
Sbjct: 128 QLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 16/182 (8%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT-VRMNVIKS----VA 576
H N+VK + +L++E+L + +D + T + + +IKS +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLS-------MDLKDFMDASALTGIPLPLIKSYLFQLL 115
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYV 636
L++ H ++HRD+ +N+L+ + ++DFG+++ + V T Y
Sbjct: 116 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
Query: 637 AP 638
AP
Sbjct: 173 AP 174
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 470 KYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFY 529
K +G+ V+ E S + V K + V + EI+ L L H N++K +
Sbjct: 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIF 86
Query: 530 GFSFHPRQSFLLYEYLGRGS-LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFP 588
+++ E G L I+S A S ++K + N L+Y H +
Sbjct: 87 EVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH-- 144
Query: 589 PIVHRDISSKNVLLGLDYDAH----VSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+VH+D+ +N+L D H + DFG+++ K D + + GT Y+AP
Sbjct: 145 -VVHKDLKPENILFQ-DTSPHSPIKIIDFGLAELFKSDEHS-TNAAGTALYMAP 195
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS--FLLYEYLGRGSLAIILSNDAAIDEFSWTV 567
EI+ L L H N+VK+ G + L+ E+L GSL L + ++ +
Sbjct: 58 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK--NKINLKQ 115
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
++ + + Y+ + VHRD++++NVL+ ++ + DFG++K ++ D
Sbjct: 116 QLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 169
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSK 598
FL+++ + +G L L+ + E M + V L ++ IVHRD+ +
Sbjct: 87 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPE 140
Query: 599 NVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
N+LL D + ++DFG S L P E GT Y+AP
Sbjct: 141 NILLDDDMNIKLTDFGFSCQLDP-GEKLREVCGTPSYLAP 179
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 8/128 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
EI L LRH +++K Y P ++ EY G I+ ++
Sbjct: 57 EREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQ 116
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFV 630
+I ++ Y H IVHRD+ +N+LL + + ++DFG+S + D +
Sbjct: 117 IICAI----EYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSC 168
Query: 631 GTFGYVAP 638
G+ Y AP
Sbjct: 169 GSPNYAAP 176
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 492 VAVK--KFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK K S PD AF E + +L+H+ +V+ Y +++ EY+ GS
Sbjct: 49 VAVKSLKQGSMSPD-----AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGS 102
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L L + I + + +++ +A ++++ + +HRD+ + N+L+
Sbjct: 103 LVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCK 158
Query: 610 VSDFGISKFLK 620
++DFG+++ ++
Sbjct: 159 IADFGLARLIE 169
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E+L + + + +A+ + + + + L++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFM--DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 119 CHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + FV T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAP 191
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 510 FSNEIKALTELRHR-NVVKFYGFSFHPRQSFLLYEYLGRGSL------AIILSNDAAI-- 560
F+ E++ L +L H N++ G H +L EY G+L + +L D A
Sbjct: 69 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 128
Query: 561 -----DEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGI 615
S ++ VA + Y+ F +HR+++++N+L+G +Y A ++DFG+
Sbjct: 129 ANSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRNLAARNILVGENYVAKIADFGL 185
Query: 616 SK 617
S+
Sbjct: 186 SR 187
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 512 NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL--AIILSNDAAIDEFSWTVRM 569
E++ L +L H N++K + +++ E G L II FS
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-----RFSEHDAA 124
Query: 570 NVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKFLKPDSSNW 626
+IK V + ++YMH IVHRD+ +N+LL D D + DFG+S + + +
Sbjct: 125 RIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKM 180
Query: 627 SEFVGTFGYVAP 638
+ +GT Y+AP
Sbjct: 181 KDRIGTAYYIAP 192
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 474 GTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSF 533
G+ G+A + K+ + V +K+ + ++ E+ L ++H N+V+ Y SF
Sbjct: 35 GSFGKAILVKSTEDGRQYV-IKEINISRMSSKEREESRREVAVLANMKHPNIVQ-YRESF 92
Query: 534 HPRQS-FLLYEYLGRGSL--------AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
S +++ +Y G L ++ D +D W V++ + L ++H
Sbjct: 93 EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILD---WFVQICL------ALKHVHD 143
Query: 585 DYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRDI S+N+ L D + DFGI++ L +GT Y++P
Sbjct: 144 R---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSP 194
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 492 VAVK--KFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK K S PD AF E + +L+H+ +V+ Y +++ EY+ GS
Sbjct: 48 VAVKSLKQGSMSPD-----AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGS 101
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L L + I + + +++ +A ++++ + +HRD+ + N+L+
Sbjct: 102 LVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCK 157
Query: 610 VSDFGISKFLK 620
++DFG+++ ++
Sbjct: 158 IADFGLARLIE 168
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + FV T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAP 191
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
NF IG VYKA + E+VA+KK V EI L EL H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+VK + +L++E++ + + + +A+ + + + + L++ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ ++ V T Y AP
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 492 VAVK--KFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK K S PD AF E + +L+H+ +V+ Y +++ EY+ GS
Sbjct: 46 VAVKSLKQGSMSPD-----AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGS 99
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L L + I + + +++ +A ++++ + +HRD+ + N+L+
Sbjct: 100 LVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCK 155
Query: 610 VSDFGISKFLK 620
++DFG+++ ++
Sbjct: 156 IADFGLARLIE 166
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 16/181 (8%)
Query: 466 NFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSN---EIKALTELR 521
NF + IG + VY+A L VA+KK D++ +A ++ EI L +L
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIF--DLMDAKARADCIKEIDLLKQLN 90
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM----NVIKSVAN 577
H NV+K+Y + ++ E G L+ + I F R+ V K
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDLSRM------IKHFKKQKRLIPERTVWKYFVQ 144
Query: 578 TLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVA 637
S + H + ++HRDI NV + + D G+ +F ++ VGT Y++
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMS 204
Query: 638 P 638
P
Sbjct: 205 P 205
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 492 VAVK--KFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK K S PD AF E + +L+H+ +V+ Y +++ EY+ GS
Sbjct: 40 VAVKSLKQGSMSPD-----AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGS 93
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L L + I + + +++ +A ++++ + +HRD+ + N+L+
Sbjct: 94 LVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCK 149
Query: 610 VSDFGISKFLK 620
++DFG+++ ++
Sbjct: 150 IADFGLARLIE 160
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSK 598
FL+++ + +G L L+ + E M + V L ++ IVHRD+ +
Sbjct: 100 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPE 153
Query: 599 NVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
N+LL D + ++DFG S L P E GT Y+AP
Sbjct: 154 NILLDDDMNIKLTDFGFSCQLDP-GEKLREVCGTPSYLAP 192
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 86 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + FV T Y AP
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAP 187
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 78/190 (41%), Gaps = 23/190 (12%)
Query: 464 TNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRH 522
+++F K +G V A P+ EIVA+KK P + EIK L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKH 68
Query: 523 RNVVKFYGF----SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANT 578
N++ + SF + + L + L ++S D+ +++V
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV--- 125
Query: 579 LSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS----------SNWSE 628
+H ++HRD+ N+L+ + D V DFG+++ + + S +E
Sbjct: 126 -KVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 629 FVGTFGYVAP 638
+V T Y AP
Sbjct: 182 YVATRWYRAP 191
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 492 VAVK--KFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK K S PD AF E + +L+H+ +V+ Y +++ EY+ GS
Sbjct: 46 VAVKSLKQGSMSPD-----AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGS 99
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L L + I + + +++ +A ++++ + +HRD+ + N+L+
Sbjct: 100 LVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCK 155
Query: 610 VSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639
++DFG+++ ++ + E+ G PI
Sbjct: 156 IADFGLARLIEDN-----EYTAREGAKFPI 180
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 492 VAVK--KFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK K S PD AF E + +L+H+ +V+ Y +++ EY+ GS
Sbjct: 35 VAVKSLKQGSMSPD-----AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGS 88
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L L + I + + +++ +A ++++ + +HRD+ + N+L+
Sbjct: 89 LVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCK 144
Query: 610 VSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639
++DFG+++ ++ + E+ G PI
Sbjct: 145 IADFGLARLIEDN-----EYTAREGAKFPI 169
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ EI L L H N++K P + L+ E + G L D +++
Sbjct: 90 VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELF-----DRIVEKGY 144
Query: 565 WTVR--MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL---DYDAHVSDFGISKFL 619
++ R + +K + ++Y+H + IVHRD+ +N+L D ++DFG+SK +
Sbjct: 145 YSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201
Query: 620 KPDSSNWSEFVGTFGYVAP 638
+ GT GY AP
Sbjct: 202 E-HQVLMKTVCGTPGYCAP 219
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 492 VAVK--KFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK K S PD AF E + +L+H+ +V+ Y +++ EY+ GS
Sbjct: 45 VAVKSLKQGSMSPD-----AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGS 98
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L L + I + + +++ +A ++++ + +HRD+ + N+L+
Sbjct: 99 LVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCK 154
Query: 610 VSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639
++DFG+++ ++ + E+ G PI
Sbjct: 155 IADFGLARLIEDN-----EYTAREGAKFPI 179
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 434 QGNKGLCGDVKLFSILTFEGKILYE---EVIRATNNFDAKYCIGTAGQASVYKAELPSWE 490
+GN GLC + + + + K + E+ R + + K G G+ V+ A
Sbjct: 156 KGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGE--VWMATYNKHT 213
Query: 491 IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
VAVK P + +AF E + L+H +VK + +++ E++ +GSL
Sbjct: 214 KVAVKTMK---PGSMSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSL 269
Query: 551 AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHV 610
L +D + ++ +A ++++ + +HRD+ + N+L+ +
Sbjct: 270 LDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY---IHRDLRAANILVSASLVCKI 325
Query: 611 SDFGISKFLKPDSSNWSEFVGTFGYVAPI 639
+DFG+++ ++ + E+ G PI
Sbjct: 326 ADFGLARVIEDN-----EYTAREGAKFPI 349
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 492 VAVK--KFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK K S PD AF E + +L+H+ +V+ Y +++ EY+ GS
Sbjct: 50 VAVKSLKQGSMSPD-----AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGS 103
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L L + I + + +++ +A ++++ + +HRD+ + N+L+
Sbjct: 104 LVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCK 159
Query: 610 VSDFGISKFLK 620
++DFG+++ ++
Sbjct: 160 IADFGLARLIE 170
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 492 VAVK--KFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK K S PD AF E + +L+H+ +V+ Y +++ EY+ GS
Sbjct: 42 VAVKSLKQGSMSPD-----AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGS 95
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L L + I + + +++ +A ++++ + +HRD+ + N+L+
Sbjct: 96 LVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCK 151
Query: 610 VSDFGISKFLK 620
++DFG+++ ++
Sbjct: 152 IADFGLARLIE 162
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 434 QGNKGLCGDVKLFSILTFEGKILYE---EVIRATNNFDAKYCIGTAGQASVYKAELPSWE 490
+GN GLC + + + + K + E+ R + + K G G+ V+ A
Sbjct: 150 KGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGE--VWMATYNKHT 207
Query: 491 IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
VAVK P + +AF E + L+H +VK + +++ E++ +GSL
Sbjct: 208 KVAVKTMK---PGSMSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSL 263
Query: 551 AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHV 610
L +D + ++ +A ++++ + +HRD+ + N+L+ +
Sbjct: 264 LDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY---IHRDLRAANILVSASLVCKI 319
Query: 611 SDFGIS--------KFLKPDSSNWSEFV 630
+DFG++ K+ P++ N+ F
Sbjct: 320 ADFGLARVGAKFPIKWTAPEAINFGSFT 347
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 492 VAVK--KFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK K S PD AF E + +L+H+ +V+ Y +++ EY+ GS
Sbjct: 40 VAVKSLKQGSMSPD-----AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGS 93
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L L + I + + +++ +A ++++ + +HRD+ + N+L+
Sbjct: 94 LVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCK 149
Query: 610 VSDFGISKFLK 620
++DFG+++ ++
Sbjct: 150 IADFGLARLIE 160
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 492 VAVK--KFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK K S PD AF E + +L+H+ +V+ Y +++ EY+ GS
Sbjct: 41 VAVKSLKQGSMSPD-----AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGS 94
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L L + I + + +++ +A ++++ + +HRD+ + N+L+
Sbjct: 95 LVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCK 150
Query: 610 VSDFGISKFLK 620
++DFG+++ ++
Sbjct: 151 IADFGLARLIE 161
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Query: 512 NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNV 571
E++ L +L H N++K + +++ E G L FS +
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAARI 126
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKFLKPDSSNWSE 628
IK V + ++YMH IVHRD+ +N+LL D D + DFG+S + + + +
Sbjct: 127 IKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKD 182
Query: 629 FVGTFGYVAP 638
+GT Y+AP
Sbjct: 183 RIGTAYYIAP 192
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Query: 512 NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNV 571
E++ L +L H N++K + +++ E G L FS +
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAARI 126
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKFLKPDSSNWSE 628
IK V + ++YMH IVHRD+ +N+LL D D + DFG+S + + + +
Sbjct: 127 IKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKD 182
Query: 629 FVGTFGYVAP 638
+GT Y+AP
Sbjct: 183 RIGTAYYIAP 192
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 18/146 (12%)
Query: 492 VAVKKFHS-PHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK S H D ++A +E+K ++ L +H N+V G H ++ EY G
Sbjct: 79 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 550 L-------AIILSNDAA--IDEFSWTVR--MNVIKSVANTLSYMHHDYFPPIVHRDISSK 598
L + +L D A I + + R ++ VA ++++ +HRD++++
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRDVAAR 193
Query: 599 NVLLGLDYDAHVSDFGISKFLKPDSS 624
NVLL + A + DFG+++ + DS+
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSN 219
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
+ NF IG VYKA + E+VA+KK V EI L EL
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 522 HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY 581
H N+VK + +L++E++ + + + +A+ + + + + L++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 582 MHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H ++HRD+ +N+L+ + ++DFG+++ + V T Y AP
Sbjct: 122 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 492 VAVK--KFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK K S PD AF E + +L+H+ +V+ Y +++ EY+ GS
Sbjct: 40 VAVKSLKQGSMSPD-----AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGS 93
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L L + I + + +++ +A ++++ + +HRD+ + N+L+
Sbjct: 94 LVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCK 149
Query: 610 VSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639
++DFG+++ ++ + E+ G PI
Sbjct: 150 IADFGLARLIEDN-----EYTAREGAKFPI 174
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 42/204 (20%)
Query: 438 GLCGDVKLFSILTFEGKILYEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKF 497
G CG+VKL FE K + IR + K+ IG+A +A
Sbjct: 160 GACGEVKL----AFERKTCKKVAIRIISK--RKFAIGSAREAD----------------- 196
Query: 498 HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSND 557
P + V+ EI+ L +L H ++K F F +++ E + G L + +
Sbjct: 197 ----PALNVE----TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGN 247
Query: 558 AAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG---LDYDAHVSDFG 614
+ E T ++ + + + Y+H + I+HRD+ +NVLL D ++DFG
Sbjct: 248 KRLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 301
Query: 615 ISKFLKPDSSNWSEFVGTFGYVAP 638
SK L ++S GT Y+AP
Sbjct: 302 HSKILG-ETSLMRTLCGTPTYLAP 324
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 58/150 (38%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 55 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 113
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 170
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + E V T Y AP
Sbjct: 171 DFGLARVADPDHDHTGFLXEXVATRWYRAP 200
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 58/150 (38%), Gaps = 7/150 (4%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLA 551
VA+KK SP Q EIK L RH N++ P + Y+ + +
Sbjct: 56 VAIKKI-SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME 114
Query: 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
L S + + L Y+H ++HRD+ N+LL D +
Sbjct: 115 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKIC 171
Query: 612 DFGISKFLKPDSSN---WSEFVGTFGYVAP 638
DFG+++ PD + E V T Y AP
Sbjct: 172 DFGLARVADPDHDHTGFLXEXVATRWYRAP 201
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTV 567
Q E + L+H N+V+ + +L+++ + G L + A + +S
Sbjct: 48 QKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEAD 104
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA---HVSDFGISKFLKPDSS 624
+ I+ + + + H +VHRD+ +N+LL ++DFG++ ++ D
Sbjct: 105 ASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ 161
Query: 625 NWSEFVGTFGYVAP 638
W F GT GY++P
Sbjct: 162 AWFGFAGTPGYLSP 175
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 42/204 (20%)
Query: 438 GLCGDVKLFSILTFEGKILYEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKF 497
G CG+VKL FE K + IR + K+ IG+A +A
Sbjct: 146 GACGEVKL----AFERKTCKKVAIRIISK--RKFAIGSAREAD----------------- 182
Query: 498 HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSND 557
P + V+ EI+ L +L H ++K F F +++ E + G L + +
Sbjct: 183 ----PALNVE----TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGN 233
Query: 558 AAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG---LDYDAHVSDFG 614
+ E T ++ + + + Y+H + I+HRD+ +NVLL D ++DFG
Sbjct: 234 KRLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 287
Query: 615 ISKFLKPDSSNWSEFVGTFGYVAP 638
SK L ++S GT Y+AP
Sbjct: 288 HSKILG-ETSLMRTLCGTPTYLAP 310
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 16/145 (11%)
Query: 492 VAVKKFHS-PHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK S H D ++A +E+K ++ L +H N+V G H ++ EY G
Sbjct: 79 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD----------YFPPIVHRDISSKN 599
L L + + E + S A+T +H +HRD++++N
Sbjct: 137 LLNFLRRKSRVLETD--PAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 194
Query: 600 VLLGLDYDAHVSDFGISKFLKPDSS 624
VLL + A + DFG+++ + DS+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSN 219
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN--VVKFYG 530
IG+ G + V++ +I A+K + D ++ NEI L +L+ + +++ Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 531 FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPI 590
+ + +++ E G L L +ID + R + K N L +H + I
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE---RKSYWK---NMLEAVHTIHQHGI 176
Query: 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVAP 638
VH D+ N L+ +D + DFGI+ ++PD+++ VGT Y+ P
Sbjct: 177 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 225
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN--VVKFYG 530
IG+ G + V++ +I A+K + D ++ NEI L +L+ + +++ Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 531 FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPI 590
+ + +++ E G L L +ID + R + K N L +H + I
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE---RKSYWK---NMLEAVHTIHQHGI 176
Query: 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVAP 638
VH D+ N L+ +D + DFGI+ ++PD+++ VGT Y+ P
Sbjct: 177 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 225
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 6/175 (3%)
Query: 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
NF IG VYKA + E+VA+ K V EI L EL H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+VK + +L++E+L + + + +A+ + + + + L++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ ++ V T Y AP
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 6/175 (3%)
Query: 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
NF IG VYKA + E+VA+ K V EI L EL H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
N+VK + +L++E+L + + + +A+ + + + + L++ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ ++ V T Y AP
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 13/173 (7%)
Query: 464 TNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRH 522
+++F K +G V A P+ EIVA+KK P + EIK L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKH 68
Query: 523 RNVVKFYGF----SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANT 578
N++ + SF + + L + L ++S D+ +++V
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV--- 125
Query: 579 LSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVG 631
+H ++HRD+ N+L+ + D V DFG+++ + +++ SE G
Sbjct: 126 -KVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 110 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 165
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 211
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 21/167 (12%)
Query: 479 ASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS 538
S Y A L + VAVKK P ++ + E++ L L+H NV+ F P S
Sbjct: 45 CSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV-FTPATS 101
Query: 539 -------FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIV 591
+L+ +G L I+ + A DE + +++ L Y+H I+
Sbjct: 102 IEDFSEVYLVTTLMG-ADLNNIVKSQALSDEHVQFLVYQLLRG----LKYIHS---AGII 153
Query: 592 HRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
HRD+ NV + D + + DFG+++ + + +V T Y AP
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLARQADEEMTG---YVATRWYRAP 197
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 473 IGTAGQASVYKAELPSWE-IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G A+VYK + + +VA+K+ H + A E+ L +L+H N+V +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI-REVSLLKDLKHANIVTLHDI 68
Query: 532 SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIK----SVANTLSYMHHDYF 587
+ L++EYL + +D+ + M+ +K + L+Y H
Sbjct: 69 IHTEKSLTLVFEYLDKDL-------KQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ-- 119
Query: 588 PPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ +N+L+ + ++DFG+++ + + V T Y P
Sbjct: 120 -KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPP 169
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 15 SNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEI-DPLTHLKHLYINVNKLRGSVPRE 73
SN L A+ +++ L LD+G NQL+ V+P + D L HLK L++ NKL +PR
Sbjct: 73 SNQLGALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRG 130
Query: 74 VGQLSSLKQLVLYCNGLSGWLPSSFGNLNNL 104
+ +L+ L L L N L +F L++L
Sbjct: 131 IERLTHLTHLALDQNQLKSIPHGAFDRLSSL 161
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 23/124 (18%)
Query: 16 NTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEI-DPLTHLKHLYINVNKLRGSVPREV 74
N + + P ++ NLK L +G+NQL G +P + D LT L L + N+L +P V
Sbjct: 50 NQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT-VLPSAV 107
Query: 75 -GQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQLSG 133
+L LK+L + CN L+ LP L +L HL L +NQL
Sbjct: 108 FDRLVHLKELFMCCNKLTE-LPRGIERLTHLT-----------------HLALDQNQLK- 148
Query: 134 SIPH 137
SIPH
Sbjct: 149 SIPH 152
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 109 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 164
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 210
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 504 MVVQQAFSNEIKALTELR----HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAA 559
++ ++ +N K +T L+ H N+VK + +FL+ E L G L +
Sbjct: 43 IISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKK- 101
Query: 560 IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD---AHVSDFGIS 616
FS T +++ + + +S+MH +VHRD+ +N+L + D + DFG +
Sbjct: 102 --HFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFA 156
Query: 617 KFLKPDSSNWSEFVGTFGYVAP 638
+ PD+ T Y AP
Sbjct: 157 RLKPPDNQPLKTPCFTLHYAAP 178
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 191
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 86 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 187
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTV 567
Q E + L+H N+V+ + +L+++ + G L + A + +S
Sbjct: 66 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEAD 122
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA---HVSDFGISKFLKPDSS 624
+ I+ + + + H +VHRD+ +N+LL ++DFG++ ++ +
Sbjct: 123 ASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 179
Query: 625 NWSEFVGTFGYVAP 638
W F GT GY++P
Sbjct: 180 AWFGFAGTPGYLSP 193
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 144/325 (44%), Gaps = 38/325 (11%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCN 88
++NL ++ NNQL+ + P + LT L + +N N++ P + L++L L L+ N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 89 GLSGWLP-SSFGNLNNLAIGS--MPXXXXXXXXXXXFHLDLSENQLSGSIPHFLGHLSNL 145
++ P + NLN L + S + L S NQ++ P L +L+ L
Sbjct: 118 QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKP--LANLTTL 175
Query: 146 AVLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSISNLSNLEGLYLYSSLVS- 204
L + N + S +L K+ + P I L+NL+ L L + +
Sbjct: 176 ERLDISSNKV--SDISVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKD 231
Query: 205 -AEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTF 263
+ +L L +L++ N Q+ P L T L + L N ++ NI + G+ LT
Sbjct: 232 IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQIS-NISPLAGLTA-LTN 287
Query: 264 LDLSQNNF-------------YGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGEL 310
L+L++N Y +L F NNI+ P + L +L +L FS N+ V ++
Sbjct: 288 LELNENQLEDISPISNLKNLTYLTLYF--NNISDISP--VSSLTKLQRLFFS-NNKVSDV 342
Query: 311 PIELGNLKSLNYRALNGNKVYGSLP 335
L NL ++N+ + N++ P
Sbjct: 343 S-SLANLTNINWLSAGHNQISDLTP 366
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 22/92 (23%)
Query: 26 IGNISNLKFLDMGNNQLSGVIP-----------------QEIDP---LTHLKHLYINVNK 65
+ +++NL LD+ NNQ+S + P I P LT L +L +N N+
Sbjct: 235 LASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQ 294
Query: 66 LRGSVPREVGQLSSLKQLVLYCNGLSGWLPSS 97
L P + L +L L LY N +S P S
Sbjct: 295 LEDISP--ISNLKNLTYLTLYFNNISDISPVS 324
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 100 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 155
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 156 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 201
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 96 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 197
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 16/141 (11%)
Query: 504 MVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEF 563
M ++ NEI + +L H N+++ Y L+ EY+ G L D IDE
Sbjct: 127 MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF-----DRIIDES 181
Query: 564 SWTVRMNVI---KSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA---HVSDFGISK 617
++ I K + + +MH Y I+H D+ +N+L ++ DA + DFG+++
Sbjct: 182 YNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILC-VNRDAKQIKIIDFGLAR 237
Query: 618 FLKPDSSNWSEFVGTFGYVAP 638
KP F GT ++AP
Sbjct: 238 RYKPREKLKVNF-GTPEFLAP 257
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 159/411 (38%), Gaps = 109/411 (26%)
Query: 27 GNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLY 86
G +K LD+ NN+++ YI+ + L+ V +L+ LVL
Sbjct: 23 GLTEAVKSLDLSNNRIT----------------YISNSDLQRCV--------NLQALVLT 58
Query: 87 CNGLSGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQLSGSIPHFLGHLSNLA 146
NG++ SF +L +L HLDLS N LS + LS+L
Sbjct: 59 SNGINTIEEDSFSSLGSLE-----------------HLDLSYNYLSNLSSSWFKPLSSLT 101
Query: 147 VLH--------LGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSISNLSNLEGLYL 198
L+ LG+ SLF L K+Q I + N++
Sbjct: 102 FLNLLGNPYKTLGETSLFSH----LTKLQ-------------------ILRVGNMDT--- 135
Query: 199 YSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLN--IVHLEQNHLTGNIY-EVF 255
++ + + L L ELEID L PKSL++ +++ I+H++Q+ L I+ +V
Sbjct: 136 FTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVT 195
Query: 256 GIYPNLTFLDLSQNNFY------GSLNFSMNNIT-RSIPPKIGKLYQLHKLDFSLNHIVG 308
L D + F+ G N + T R++ L+Q+ KL LN I G
Sbjct: 196 SSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKL---LNQISG 252
Query: 309 ELPIE--------LGNLK-SLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYN-NEFR 358
L +E +GN + S N R ++ KV R L + DLST Y+ E
Sbjct: 253 LLELEFDDCTLNGVGNFRASDNDRVIDPGKVETLTIRRLHIPRFYLFYDLSTLYSLTERV 312
Query: 359 KEFPVELEK-----------LVQLTELDLVITFWEERYRPKSVIWKAWRSL 398
K VE K L L LDL E Y S AW SL
Sbjct: 313 KRITVENSKVFLVPCLLSQHLKSLEYLDLSENLMVEEYLKNSACEDAWPSL 363
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 11/162 (6%)
Query: 479 ASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS 538
S Y A L + VAVKK P ++ + E++ L L+H NV+ F P S
Sbjct: 37 CSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV-FTPATS 93
Query: 539 FLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDIS 596
+ YL + L+N S ++ + L Y+H I+HRD+
Sbjct: 94 IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLK 150
Query: 597 SKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
NV + D + + DFG+++ + + +V T Y AP
Sbjct: 151 PSNVAVNEDCELRILDFGLARQADEEMTG---YVATRWYRAP 189
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 42/204 (20%)
Query: 438 GLCGDVKLFSILTFEGKILYEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKF 497
G CG+VKL FE K + I+ + K+ IG+A +A
Sbjct: 21 GACGEVKL----AFERKTCKKVAIKIISK--RKFAIGSAREAD----------------- 57
Query: 498 HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSND 557
P + V+ EI+ L +L H ++K F F +++ E + G L + +
Sbjct: 58 ----PALNVE----TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGN 108
Query: 558 AAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG---LDYDAHVSDFG 614
+ E T ++ + + + Y+H + I+HRD+ +NVLL D ++DFG
Sbjct: 109 KRLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 162
Query: 615 ISKFLKPDSSNWSEFVGTFGYVAP 638
SK L ++S GT Y+AP
Sbjct: 163 HSKILG-ETSLMRTLCGTPTYLAP 185
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 509 AFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL-------AIILSNDAAID 561
+ NEI L +++H N+V +L+ + + G L + DA++
Sbjct: 52 SLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL- 110
Query: 562 EFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVL-LGLDYDAH--VSDFGISKF 618
VI+ V + + Y+H + IVHRD+ +N+L L + ++ ++DFG+SK
Sbjct: 111 ---------VIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158
Query: 619 LKPDSSNWSEFVGTFGYVAP 638
+ S GT GYVAP
Sbjct: 159 --EQNGIMSTACGTPGYVAP 176
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 42/204 (20%)
Query: 438 GLCGDVKLFSILTFEGKILYEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKF 497
G CG+VKL FE K + I+ + K+ IG+A +A
Sbjct: 21 GACGEVKL----AFERKTCKKVAIKIISK--RKFAIGSAREAD----------------- 57
Query: 498 HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSND 557
P + V+ EI+ L +L H ++K F F +++ E + G L + +
Sbjct: 58 ----PALNVE----TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGN 108
Query: 558 AAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG---LDYDAHVSDFG 614
+ E T ++ + + + Y+H + I+HRD+ +NVLL D ++DFG
Sbjct: 109 KRLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 162
Query: 615 ISKFLKPDSSNWSEFVGTFGYVAP 638
SK L ++S GT Y+AP
Sbjct: 163 HSKILG-ETSLMRTLCGTPTYLAP 185
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 11/162 (6%)
Query: 479 ASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS 538
S Y A L + VAVKK P ++ + E++ L L+H NV+ F P S
Sbjct: 45 CSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV-FTPATS 101
Query: 539 FLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDIS 596
+ YL + L+N S ++ + L Y+H I+HRD+
Sbjct: 102 IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLK 158
Query: 597 SKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
NV + D + + DFG+++ + + +V T Y AP
Sbjct: 159 PSNVAVNEDSELRILDFGLARQADEEMTG---YVATRWYRAP 197
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 42/204 (20%)
Query: 438 GLCGDVKLFSILTFEGKILYEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKF 497
G CG+VKL FE K + I+ + K+ IG+A +A
Sbjct: 27 GACGEVKL----AFERKTCKKVAIKIISK--RKFAIGSAREAD----------------- 63
Query: 498 HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSND 557
P + V+ EI+ L +L H ++K F F +++ E + G L + +
Sbjct: 64 ----PALNVE----TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGN 114
Query: 558 AAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG---LDYDAHVSDFG 614
+ E T ++ + + + Y+H + I+HRD+ +NVLL D ++DFG
Sbjct: 115 KRLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 168
Query: 615 ISKFLKPDSSNWSEFVGTFGYVAP 638
SK L ++S GT Y+AP
Sbjct: 169 HSKILG-ETSLMRTLCGTPTYLAP 191
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 95 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 150
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG---YVATRWYRAP 196
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 42/204 (20%)
Query: 438 GLCGDVKLFSILTFEGKILYEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKF 497
G CG+VKL FE K + I+ + K+ IG+A +A
Sbjct: 20 GACGEVKL----AFERKTCKKVAIKIISK--RKFAIGSAREAD----------------- 56
Query: 498 HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSND 557
P + V+ EI+ L +L H ++K F F +++ E + G L + +
Sbjct: 57 ----PALNVE----TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGN 107
Query: 558 AAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG---LDYDAHVSDFG 614
+ E T ++ + + + Y+H + I+HRD+ +NVLL D ++DFG
Sbjct: 108 KRLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 161
Query: 615 ISKFLKPDSSNWSEFVGTFGYVAP 638
SK L ++S GT Y+AP
Sbjct: 162 HSKILG-ETSLMRTLCGTPTYLAP 184
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN--VVKFYG 530
IG+ G + V++ +I A+K + D ++ NEI L +L+ + +++ Y
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 531 FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPI 590
+ + +++ E G L L +ID + R + K N L +H + I
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE---RKSYWK---NMLEAVHTIHQHGI 148
Query: 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVAP 638
VH D+ N L+ +D + DFGI+ ++PD VGT Y+ P
Sbjct: 149 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPP 197
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQSF-LLYEYLGRGSLAI-ILSNDAAIDE--- 562
QA ++ + A+ L H ++V+ G P S L+ +YL GSL + + A+
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLL 117
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+W V+ +A + Y+ +VHR+++++NVLL V+DFG++ L PD
Sbjct: 118 LNWGVQ------IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168
Query: 623 SSN 625
Sbjct: 169 DKQ 171
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 42/204 (20%)
Query: 438 GLCGDVKLFSILTFEGKILYEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKF 497
G CG+VKL FE K + I+ + K+ IG+A +A
Sbjct: 21 GACGEVKL----AFERKTCKKVAIKIISK--RKFAIGSAREAD----------------- 57
Query: 498 HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSND 557
P + V+ EI+ L +L H ++K F F +++ E + G L + +
Sbjct: 58 ----PALNVE----TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGN 108
Query: 558 AAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG---LDYDAHVSDFG 614
+ E T ++ + + + Y+H + I+HRD+ +NVLL D ++DFG
Sbjct: 109 KRLKEA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 162
Query: 615 ISKFLKPDSSNWSEFVGTFGYVAP 638
SK L ++S GT Y+AP
Sbjct: 163 HSKILG-ETSLMRTLCGTPTYLAP 185
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQSF-LLYEYLGRGSLAI-ILSNDAAIDE--- 562
QA ++ + A+ L H ++V+ G P S L+ +YL GSL + + A+
Sbjct: 78 QAVTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLL 135
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622
+W V+ +A + Y+ +VHR+++++NVLL V+DFG++ L PD
Sbjct: 136 LNWGVQ------IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 186
Query: 623 SSN 625
Sbjct: 187 DKQ 189
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 490 EIVAVKKFHSPHPDMVVQQ--AFSNEIKALTELRHRNVVKFYGFSFHPRQSFL--LYEYL 545
E+VAVK + D Q + EI L L H +++K+ G + L + EY+
Sbjct: 61 EMVAVKALKA---DAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 546 GRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + + + + ++Y+H ++ +HRD++++NVLL D
Sbjct: 118 PLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHY---IHRDLAARNVLLDND 170
Query: 606 YDAHVSDFGISK 617
+ DFG++K
Sbjct: 171 RLVKIGDFGLAK 182
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 474 GTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQ----QAFSNEIKALTELRHRNVVKFY 529
G+ G + + PS + V+V PD++ Q F E+ A+ L HRN+++ Y
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 77
Query: 530 GFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
G P ++ E GSL L R V VA + Y+ F
Sbjct: 78 GVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF-- 132
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFL 619
+HRD++++N+LL + DFG+ + L
Sbjct: 133 -IHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 102 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 157
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 203
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 113 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 168
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 214
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 474 GTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQ----QAFSNEIKALTELRHRNVVKFY 529
G+ G + + PS + V+V PD++ Q F E+ A+ L HRN+++ Y
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 77
Query: 530 GFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
G P ++ E GSL L R V VA + Y+ F
Sbjct: 78 GVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF-- 132
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFL 619
+HRD++++N+LL + DFG+ + L
Sbjct: 133 -IHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 474 GTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQ----QAFSNEIKALTELRHRNVVKFY 529
G+ G + + PS + V+V PD++ Q F E+ A+ L HRN+++ Y
Sbjct: 29 GSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 87
Query: 530 GFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
G P ++ E GSL L R V VA + Y+ F
Sbjct: 88 GVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF-- 142
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFL 619
+HRD++++N+LL + DFG+ + L
Sbjct: 143 -IHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 110 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 165
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 211
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 474 GTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQ----QAFSNEIKALTELRHRNVVKFY 529
G+ G + + PS + V+V PD++ Q F E+ A+ L HRN+++ Y
Sbjct: 29 GSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 87
Query: 530 GFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
G P ++ E GSL L R V VA + Y+ F
Sbjct: 88 GVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF-- 142
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFL 619
+HRD++++N+LL + DFG+ + L
Sbjct: 143 -IHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 109 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 164
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 210
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 86 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 187
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 102 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 157
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 203
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 191
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 102 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 157
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 203
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 474 GTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQ----QAFSNEIKALTELRHRNVVKFY 529
G+ G + + PS + V+V PD++ Q F E+ A+ L HRN+++ Y
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 77
Query: 530 GFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
G P ++ E GSL L R V VA + Y+ F
Sbjct: 78 GVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF-- 132
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFL 619
+HRD++++N+LL + DFG+ + L
Sbjct: 133 -IHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 92 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 193
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 101 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 156
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 157 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 202
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 92 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 193
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 96 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 197
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 474 GTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQ----QAFSNEIKALTELRHRNVVKFY 529
G+ G + + PS + V+V PD++ Q F E+ A+ L HRN+++ Y
Sbjct: 23 GSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 81
Query: 530 GFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
G P ++ E GSL L R V VA + Y+ F
Sbjct: 82 GVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF-- 136
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFL 619
+HRD++++N+LL + DFG+ + L
Sbjct: 137 -IHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 95 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 150
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 196
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 191
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 101 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 156
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 157 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG---YVATRWYRAP 202
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE--YLGRGS 549
VAVKK P ++ + E++ L ++H NV+ F P +S + YL
Sbjct: 57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV-FTPARSLEEFNDVYLVTHL 115
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
+ L+N + + +I + L Y+H I+HRD+ N+ + D +
Sbjct: 116 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELK 172
Query: 610 VSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ DFG+++ + + +V T Y AP
Sbjct: 173 ILDFGLARHT---ADEMTGYVATRWYRAP 198
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 474 GTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQ----QAFSNEIKALTELRHRNVVKFY 529
G+ G + + PS + V+V PD++ Q F E+ A+ L HRN+++ Y
Sbjct: 23 GSFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 81
Query: 530 GFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
G P ++ E GSL L R V VA + Y+ F
Sbjct: 82 GVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF-- 136
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFL 619
+HRD++++N+LL + DFG+ + L
Sbjct: 137 -IHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 492 VAVK--KFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK K S PD AF E + +L+H+ +V+ Y +++ EY+ GS
Sbjct: 36 VAVKSLKQGSMSPD-----AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGS 89
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L L + I + + +++ +A ++++ + +HR++ + N+L+
Sbjct: 90 LVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNY---IHRNLRAANILVSDTLSCK 145
Query: 610 VSDFGISKFLK 620
++DFG+++ ++
Sbjct: 146 IADFGLARLIE 156
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 88 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 143
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 144 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 189
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 29/183 (15%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS 532
IG V++ + E VAVK F S ++A EI LRH N++ F
Sbjct: 37 IGKGRFGEVWRGKWRG-EEVAVKIFSSREERSWFREA---EIYQTVMLRHENILGFIAAD 92
Query: 533 FHP----RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVR--MNVIKSVANTLSYMHHDY 586
Q +L+ +Y GSL L + ++ TV + + S A+ L+++H +
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYL------NRYTVTVEGMIKLALSTASGLAHLHMEI 146
Query: 587 F-----PPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGY 635
P I HRD+ SKN+L+ + ++D G++ ++ DS+ + VGT Y
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRY 204
Query: 636 VAP 638
+AP
Sbjct: 205 MAP 207
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 191
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 87 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 142
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 188
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 191
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 191
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 92 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 193
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE--YLGRGS 549
VAVKK P ++ + E++ L ++H NV+ F P +S + YL
Sbjct: 57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV-FTPARSLEEFNDVYLVTHL 115
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
+ L+N + + +I + L Y+H I+HRD+ N+ + D +
Sbjct: 116 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELK 172
Query: 610 VSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ DFG+++ + + +V T Y AP
Sbjct: 173 ILDFGLARHT---ADEMTGYVATRWYRAP 198
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 191
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 191
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 191
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 29/183 (15%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS 532
IG V++ + E VAVK F S ++A EI LRH N++ F
Sbjct: 11 IGKGRFGEVWRGKWRG-EEVAVKIFSSREERSWFREA---EIYQTVMLRHENILGFIAAD 66
Query: 533 FHP----RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVR--MNVIKSVANTLSYMHHDY 586
Q +L+ +Y GSL L + ++ TV + + S A+ L+++H +
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYL------NRYTVTVEGMIKLALSTASGLAHLHMEI 120
Query: 587 F-----PPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGY 635
P I HRD+ SKN+L+ + ++D G++ ++ DS+ + VGT Y
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRY 178
Query: 636 VAP 638
+AP
Sbjct: 179 MAP 181
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 87 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 142
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 188
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 29/183 (15%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS 532
IG V++ + E VAVK F S ++A EI LRH N++ F
Sbjct: 14 IGKGRFGEVWRGKWRG-EEVAVKIFSSREERSWFREA---EIYQTVMLRHENILGFIAAD 69
Query: 533 FHP----RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVR--MNVIKSVANTLSYMHHDY 586
Q +L+ +Y GSL L + ++ TV + + S A+ L+++H +
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYL------NRYTVTVEGMIKLALSTASGLAHLHMEI 123
Query: 587 F-----PPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGY 635
P I HRD+ SKN+L+ + ++D G++ ++ DS+ + VGT Y
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRY 181
Query: 636 VAP 638
+AP
Sbjct: 182 MAP 184
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE--YLGRGS 549
VAVKK P ++ + E++ L ++H NV+ F P +S + YL
Sbjct: 55 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV-FTPARSLEEFNDVYLVTHL 113
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
+ L+N + + +I + L Y+H I+HRD+ N+ + D +
Sbjct: 114 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELK 170
Query: 610 VSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ DFG+++ + + +V T Y AP
Sbjct: 171 ILDFGLARHTDDEMTG---YVATRWYRAP 196
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE--YLGRGS 549
VAVKK P ++ + E++ L ++H NV+ F P +S + YL
Sbjct: 57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV-FTPARSLEEFNDVYLVTHL 115
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
+ L+N + + +I + L Y+H I+HRD+ N+ + D +
Sbjct: 116 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELK 172
Query: 610 VSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ DFG+++ + + +V T Y AP
Sbjct: 173 ILDFGLARHT---ADEMTGYVATRWYRAP 198
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 95 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 150
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 196
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 89 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 144
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 145 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 190
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 86 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 187
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 97 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 152
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 198
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 29/183 (15%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS 532
IG V++ + E VAVK F S ++A EI LRH N++ F
Sbjct: 17 IGKGRFGEVWRGKWRG-EEVAVKIFSSREERSWFREA---EIYQTVMLRHENILGFIAAD 72
Query: 533 FHP----RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVR--MNVIKSVANTLSYMHHDY 586
Q +L+ +Y GSL L + ++ TV + + S A+ L+++H +
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYL------NRYTVTVEGMIKLALSTASGLAHLHMEI 126
Query: 587 F-----PPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGY 635
P I HRD+ SKN+L+ + ++D G++ ++ DS+ + VGT Y
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRY 184
Query: 636 VAP 638
+AP
Sbjct: 185 MAP 187
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 29/183 (15%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS 532
IG V++ + E VAVK F S ++A EI LRH N++ F
Sbjct: 12 IGKGRFGEVWRGKWRG-EEVAVKIFSSREERSWFREA---EIYQTVMLRHENILGFIAAD 67
Query: 533 FHP----RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVR--MNVIKSVANTLSYMHHDY 586
Q +L+ +Y GSL L + ++ TV + + S A+ L+++H +
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYL------NRYTVTVEGMIKLALSTASGLAHLHMEI 121
Query: 587 F-----PPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGY 635
P I HRD+ SKN+L+ + ++D G++ ++ DS+ + VGT Y
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRY 179
Query: 636 VAP 638
+AP
Sbjct: 180 MAP 182
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Query: 491 IVAVKKFHSP-HPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
+VAVK PD+ + F E + L + H N+V+ G + +++ E + G
Sbjct: 141 LVAVKSCRETLPPDL--KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 198
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L + A + ++ A + Y+ +HRD++++N L+
Sbjct: 199 FLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLK 253
Query: 610 VSDFGISK 617
+SDFG+S+
Sbjct: 254 ISDFGMSR 261
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 20/174 (11%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQS-------FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
F P +S +L+ +G I+ S D + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF-----LIYQILRGLKYIHS 143
Query: 585 DYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+ + + + +V T Y AP
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTG---YVATRWYRAP 191
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 92 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 148 IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTG---YVATRWYRAP 193
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 29/183 (15%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS 532
IG V++ + E VAVK F S ++A EI LRH N++ F
Sbjct: 50 IGKGRFGEVWRGKWRG-EEVAVKIFSSREERSWFREA---EIYQTVMLRHENILGFIAAD 105
Query: 533 FHP----RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVR--MNVIKSVANTLSYMHHDY 586
Q +L+ +Y GSL L + ++ TV + + S A+ L+++H +
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYL------NRYTVTVEGMIKLALSTASGLAHLHMEI 159
Query: 587 F-----PPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS------EFVGTFGY 635
P I HRD+ SKN+L+ + ++D G++ ++ DS+ + VGT Y
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRY 217
Query: 636 VAP 638
+AP
Sbjct: 218 MAP 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 96 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 152 IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTG---YVATRWYRAP 197
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 96 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---YVATRWYRAP 197
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Query: 491 IVAVKKFHSP-HPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
+VAVK PD+ + F E + L + H N+V+ G + +++ E + G
Sbjct: 141 LVAVKSCRETLPPDL--KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 198
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L + A + ++ A + Y+ +HRD++++N L+
Sbjct: 199 FLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLK 253
Query: 610 VSDFGISK 617
+SDFG+S+
Sbjct: 254 ISDFGMSR 261
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSK 598
FL+++ + +G L L+ + E M + V L ++ IVHRD+ +
Sbjct: 100 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPE 153
Query: 599 NVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
N+LL D + ++DFG S L P GT Y+AP
Sbjct: 154 NILLDDDMNIKLTDFGFSCQLDP-GEKLRSVCGTPSYLAP 192
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 144/325 (44%), Gaps = 38/325 (11%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCN 88
++NL ++ NNQL+ + P + LT L + +N N++ P + L++L L L+ N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 89 GLSGWLP-SSFGNLNNLAIGS--MPXXXXXXXXXXXFHLDLSENQLSGSIPHFLGHLSNL 145
++ P + NLN L + S + L+ S NQ++ P L +L+ L
Sbjct: 118 QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKP--LANLTTL 175
Query: 146 AVLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSISNLSNLEGLYLYSSLVS- 204
L + N + S +L K+ + P I L+NL+ L L + +
Sbjct: 176 ERLDISSNKV--SDISVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKD 231
Query: 205 -AEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTF 263
+ +L L +L++ N Q+ P L T L + L N ++ NI + G+ LT
Sbjct: 232 IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQIS-NISPLAGLTA-LTN 287
Query: 264 LDLSQNNF-------------YGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGEL 310
L+L++N Y +L F NNI+ P + L +L +L F N+ V ++
Sbjct: 288 LELNENQLEDISPISNLKNLTYLTLYF--NNISDISP--VSSLTKLQRL-FFYNNKVSDV 342
Query: 311 PIELGNLKSLNYRALNGNKVYGSLP 335
L NL ++N+ + N++ P
Sbjct: 343 S-SLANLTNINWLSAGHNQISDLTP 366
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 22/92 (23%)
Query: 26 IGNISNLKFLDMGNNQLSGVIP-----------------QEIDP---LTHLKHLYINVNK 65
+ +++NL LD+ NNQ+S + P I P LT L +L +N N+
Sbjct: 235 LASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQ 294
Query: 66 LRGSVPREVGQLSSLKQLVLYCNGLSGWLPSS 97
L P + L +L L LY N +S P S
Sbjct: 295 LEDISP--ISNLKNLTYLTLYFNNISDISPVS 324
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
++E L+ + H +++ +G +Q F++ +Y+ G L +L F V
Sbjct: 54 NDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ---RFPNPVAKF 110
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFV 630
V L Y+H I++RD+ +N+LL + ++DFG +K++ PD +
Sbjct: 111 YAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVT--YXLC 164
Query: 631 GTFGYVAP 638
GT Y+AP
Sbjct: 165 GTPDYIAP 172
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 27 GNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLY 86
G + +L L++ NQL+G+ P + +H++ L + NK++ + L LK L LY
Sbjct: 51 GRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLY 110
Query: 87 CNGLSGWLPSSFGNLNNLA 105
N +S +P SF +LN+L
Sbjct: 111 DNQISCVMPGSFEHLNSLT 129
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 46 IPQEIDPLTHLKHLYINVNKL-RGSVPREVGQLSSLKQLVLYCNGLSGWLPSSF---GNL 101
IP++I PL H L +N N+L R S G+L L +L L N L+G P++F ++
Sbjct: 23 IPRDI-PL-HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI 80
Query: 102 NNLAIGSMPXXXXXXXXXXXFH----LDLSENQLSGSIPHFLGHLSNLAVLHLGDN 153
L +G H L+L +NQ+S +P HL++L L+L N
Sbjct: 81 QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 13/145 (8%)
Query: 291 GKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLS 350
G+L L KL+ N + G P + L NK+ ++ + L+ L+L
Sbjct: 51 GRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL- 109
Query: 351 TNYNNEFRKEFPVELEKLVQLTELDLV---------ITFWEERYRPKSVIWKAWRS-LIS 400
Y+N+ P E L LT L+L + ++ E R KS+ A R S
Sbjct: 110 --YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167
Query: 401 RMHGLSCIDISYNELRGLIRNSTGI 425
++ + D+ ++E + NS G
Sbjct: 168 KVRDVQIKDLPHSEFKCSSENSEGC 192
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE--YLGRGS 549
VAVKK P ++ + E++ L ++H NV+ F P +S + YL
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV-FTPARSLEEFNDVYLVTHL 108
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
+ L+N + + +I + L Y+H I+HRD+ N+ + D +
Sbjct: 109 MGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELK 165
Query: 610 VSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ DFG+++ + + +V T Y AP
Sbjct: 166 ILDFGLARHTDDEMTG---YVATRWYRAP 191
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 473 IGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN--VVKFYG 530
IG+ G + V++ +I A+K + D ++ NEI L +L+ + +++ Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 531 FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPI 590
+ + +++ E G L L +ID + R + K N L +H + I
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWE---RKSYWK---NMLEAVHTIHQHGI 176
Query: 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVAP 638
VH D+ N L+ +D + DFGI+ ++PD+++ VG Y+ P
Sbjct: 177 VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPP 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 113 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 168
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + +V T Y AP
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---YVATRWYRAP 214
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE--YLGRGS 549
VAVKK P ++ + E++ L ++H NV+ F P +S + YL
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV-FTPARSLEEFNDVYLVTHL 108
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
+ L+N + + +I + L Y+H I+HRD+ N+ + D +
Sbjct: 109 MGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELK 165
Query: 610 VSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ DFG+++ + + +V T Y AP
Sbjct: 166 ILDFGLARHTDDEMTG---YVATRWYRAP 191
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 15/169 (8%)
Query: 470 KYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR-HRNVVK 527
+ + G A VY+A+ + S A+K+ S + +A E+ + +L H N+V+
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEK--NRAIIQEVCFMKKLSGHPNIVQ 90
Query: 528 FYGFSFHPRQS-------FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS 580
F + ++ FLL L +G L L + S + + +
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 581 YMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK--PDSSNWS 627
+MH PPI+HRD+ +N+LL + DFG + + PD S WS
Sbjct: 151 HMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYS-WS 197
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 11/183 (6%)
Query: 461 IRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTE 519
+ +++ F +G A+VYK + + VA+K+ + A EI + E
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI-REISLMKE 59
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIK----SV 575
L+H N+V+ Y + L++E++ + S + + +N++K +
Sbjct: 60 LKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSR--TVGNTPRGLELNLVKYFQWQL 117
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L++ H + I+HRD+ +N+L+ + DFG+++ + +S V T Y
Sbjct: 118 LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWY 174
Query: 636 VAP 638
AP
Sbjct: 175 RAP 177
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 513 EIKALTELRHRNVVKFYGFSFHPRQSF--LLYEYLGRG-SLAIILSNDAAIDEFSWTVRM 569
EI L+ + H N++K Q F L+ E G G L + +DE +
Sbjct: 79 EIAILSRVEHANIIKV--LDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDE---PLAS 133
Query: 570 NVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEF 629
+ + + + + Y+ I+HRDI +N+++ D+ + DFG + +L+ ++ F
Sbjct: 134 YIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT-F 189
Query: 630 VGTFGYVAP 638
GT Y AP
Sbjct: 190 CGTIEYCAP 198
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
+ ++ V+ + Y+ F VHRD++++NVLL + A +SDFG+SK L+ D +
Sbjct: 120 IELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 16/136 (11%)
Query: 512 NEIKALTELRHRNVVKFYGFSFH--PRQSFLLYEYLGRGSLAIIL---SNDAAIDEFSWT 566
E + L +L H+N+VK + R L+ E+ GSL +L SN + E +
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL 115
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH----VSDFGISKFLKPD 622
+ V++ V ++++ + IVHR+I N++ + D ++DFG ++ L+ D
Sbjct: 116 I---VLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-D 168
Query: 623 SSNWSEFVGTFGYVAP 638
+ GT Y+ P
Sbjct: 169 DEQFVSLYGTEEYLHP 184
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 143/325 (44%), Gaps = 38/325 (11%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCN 88
++NL ++ NNQL+ + P + LT L + +N N++ P + L++L L L+ N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 89 GLSGWLP-SSFGNLNNLAIGS--MPXXXXXXXXXXXFHLDLSENQLSGSIPHFLGHLSNL 145
++ P + NLN L + S + L S NQ++ P L +L+ L
Sbjct: 118 QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKP--LANLTTL 175
Query: 146 AVLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSISNLSNLEGLYLYSSLVS- 204
L + N + S +L K+ + P I L+NL+ L L + +
Sbjct: 176 ERLDISSNKV--SDISVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKD 231
Query: 205 -AEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTF 263
+ +L L +L++ N Q+ P L T L + L N ++ NI + G+ LT
Sbjct: 232 IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQIS-NISPLAGLTA-LTN 287
Query: 264 LDLSQNNF-------------YGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGEL 310
L+L++N Y +L F NNI+ P + L +L +L F N+ V ++
Sbjct: 288 LELNENQLEDISPISNLKNLTYLTLYF--NNISDISP--VSSLTKLQRL-FFYNNKVSDV 342
Query: 311 PIELGNLKSLNYRALNGNKVYGSLP 335
L NL ++N+ + N++ P
Sbjct: 343 S-SLANLTNINWLSAGHNQISDLTP 366
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 22/92 (23%)
Query: 26 IGNISNLKFLDMGNNQLSGVIP-----------------QEIDP---LTHLKHLYINVNK 65
+ +++NL LD+ NNQ+S + P I P LT L +L +N N+
Sbjct: 235 LASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQ 294
Query: 66 LRGSVPREVGQLSSLKQLVLYCNGLSGWLPSS 97
L P + L +L L LY N +S P S
Sbjct: 295 LEDISP--ISNLKNLTYLTLYFNNISDISPVS 324
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 34/186 (18%)
Query: 473 IGTAGQASVYKA----ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
IG+ G V+KA + ++ I VK + E+KAL +L H N+V +
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVK---------YNNEKAEREVKALAKLDHVNIVHY 69
Query: 529 YG----FSFHPRQS------------FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVI 572
G F + P S F+ E+ +G+L + ++ + + +
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG-EKLDKVLALELF 128
Query: 573 KSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGT 632
+ + + Y+H +++RD+ N+ L + DFG+ LK D GT
Sbjct: 129 EQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR-XRSKGT 184
Query: 633 FGYVAP 638
Y++P
Sbjct: 185 LRYMSP 190
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
+ ++ V+ + Y+ F VHRD++++NVLL + A +SDFG+SK L+ D +
Sbjct: 108 IELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 160
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 513 EIKALTELRHRNVVKFYGFSFH--PRQSFLLYEYLGRGSLAIIL---SNDAAIDEFSWTV 567
E + L +L H+N+VK + R L+ E+ GSL +L SN + E + +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH----VSDFGISKFLKPDS 623
V++ V ++++ + IVHR+I N++ + D ++DFG ++ L+ D
Sbjct: 117 ---VLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DD 169
Query: 624 SNWSEFVGTFGYVAP 638
+ GT Y+ P
Sbjct: 170 EQFVXLYGTEEYLHP 184
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
+ ++ V+ + Y+ F VHRD++++NVLL + A +SDFG+SK L+ D +
Sbjct: 114 IELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 166
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
+ ++ V+ + Y+ F VHRD++++NVLL + A +SDFG+SK L+ D +
Sbjct: 114 IELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 166
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 44/209 (21%)
Query: 461 IRATNNFDAKYCIGTAGQASVYKAE--LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALT 518
+R ++F+ +G V KA L S A+KK H + + S E+ L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDS-RYYAIKKIR--HTEEKLSTILS-EVMLLA 57
Query: 519 ELRHRNVVKFYGFSFHPRQS-------------FLLYEYLGRGSLAIILSND---AAIDE 562
L H+ VV++Y R F+ EY G+L ++ ++ DE
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK----- 617
+ W + + + LSY+H I+HRD+ N+ + + + DFG++K
Sbjct: 118 Y-W----RLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 618 --FLKPD-------SSNWSEFVGTFGYVA 637
LK D S N + +GT YVA
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVA 198
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
+ ++ V+ + Y+ F VHRD++++NVLL + A +SDFG+SK L+ D +
Sbjct: 110 IELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 162
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
+ ++ V+ + Y+ F VHRD++++NVLL + A +SDFG+SK L+ D +
Sbjct: 472 IELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
+ ++ V+ + Y+ F VHRD++++NVLL + A +SDFG+SK L+ D +
Sbjct: 473 IELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 525
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 110 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 165
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + V T Y AP
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---XVATRWYRAP 211
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + D+G+++ + + +V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTG---YVATRWYRAP 191
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
+ ++ V+ + Y+ F VHRD++++NVLL + A +SDFG+SK L+ D +
Sbjct: 130 IELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
+ ++ V+ + Y+ F VHRD++++NVLL + A +SDFG+SK L+ D +
Sbjct: 130 IELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 459 EVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALT 518
E+ R + + K G G+ V+ A VAVK P + +AF E +
Sbjct: 11 EIPRESLKLEKKLGAGQFGE--VWMATYNKHTKVAVKTMK---PGSMSVEAFLAEANVMK 65
Query: 519 ELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANT 578
L+H +VK + +++ E++ +GSL L +D + ++ +A
Sbjct: 66 TLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEG 123
Query: 579 LSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620
++++ + +HRD+ + N+L+ ++DFG+++ ++
Sbjct: 124 MAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVIE 162
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
+ ++ V+ + Y+ F VHRD++++NVLL + A +SDFG+SK L+ D +
Sbjct: 128 IELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 180
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH--PRQSFLLYEYLG 546
E+VAVK P + + + EI+ L L H ++VK+ G + L+ EY+
Sbjct: 38 EMVAVKALKEGCGPQL--RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 95
Query: 547 RGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY 606
GSL L + + + ++Y+H ++ +HR ++++NVLL D
Sbjct: 96 LGSLRDYLPRHCV----GLAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLDNDR 148
Query: 607 DAHVSDFGISK 617
+ DFG++K
Sbjct: 149 LVKIGDFGLAK 159
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DFG+++ + + V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---XVATRWYRAP 191
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 575 VANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFG 634
A +S + H + I++RD+ +NVLL D + +SD G++ LK + + GT G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 635 YVAP 638
++AP
Sbjct: 355 FMAP 358
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 490 EIVAVKKFHSPHPDMVVQQ--AFSNEIKALTELRHRNVVKFYGFSFHPRQSFL--LYEYL 545
E+VAVK + D Q + EI L L H +++K+ G + L + EY+
Sbjct: 44 EMVAVKALKA---DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 546 GRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + + + + ++Y+H ++ +HR+++++NVLL D
Sbjct: 101 PLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHSQHY---IHRNLAARNVLLDND 153
Query: 606 YDAHVSDFGISK 617
+ DFG++K
Sbjct: 154 RLVKIGDFGLAK 165
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 490 EIVAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH--PRQSFLLYEYLG 546
E+VAVK P + + + EI+ L L H ++VK+ G + L+ EY+
Sbjct: 39 EMVAVKALKEGCGPQL--RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 547 RGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY 606
GSL L + + + ++Y+H ++ +HR ++++NVLL D
Sbjct: 97 LGSLRDYLPRHCV----GLAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLDNDR 149
Query: 607 DAHVSDFGISK 617
+ DFG++K
Sbjct: 150 LVKIGDFGLAK 160
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 575 VANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFG 634
A +S + H + I++RD+ +NVLL D + +SD G++ LK + + GT G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 635 YVAP 638
++AP
Sbjct: 355 FMAP 358
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 575 VANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFG 634
A +S + H + I++RD+ +NVLL D + +SD G++ LK + + GT G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 635 YVAP 638
++AP
Sbjct: 355 FMAP 358
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 575 VANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFG 634
A +S + H + I++RD+ +NVLL D + +SD G++ LK + + GT G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 635 YVAP 638
++AP
Sbjct: 355 FMAP 358
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 474 GTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSF 533
G G A + + +L + E+VAVK + + EI LRH N+V+F
Sbjct: 31 GNFGVARLMRDKL-TKELVAVKYIER---GAAIDENVQREIINHRSLRHPNIVRFKEVIL 86
Query: 534 HPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHR 593
P ++ EY G L + N FS + + + +SY H I HR
Sbjct: 87 TPTHLAIIMEYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSMQ---ICHR 140
Query: 594 DISSKNVLLGLDYDAH--VSDFGISK----FLKPDSSNWSEFVGTFGYVAP 638
D+ +N LL + DFG SK +P S+ VGT Y+AP
Sbjct: 141 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAP 186
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 490 EIVAVKKFHSPHPDMVVQQ--AFSNEIKALTELRHRNVVKFYGFSFHPRQSFL--LYEYL 545
E+VAVK + D Q + EI L L H +++K+ G + L + EY+
Sbjct: 44 EMVAVKALKA---DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 546 GRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605
GSL L + + + + ++Y+H ++ +HR+++++NVLL D
Sbjct: 101 PLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHY---IHRNLAARNVLLDND 153
Query: 606 YDAHVSDFGISK 617
+ DFG++K
Sbjct: 154 RLVKIGDFGLAK 165
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 469 AKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVV- 526
AK GT G+ V+KA + + VA+KK + EIK L L+H NVV
Sbjct: 24 AKIGQGTFGE--VFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 527 -------KFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
K ++ +L++++ LA +LSN + +F+ + V++ + N L
Sbjct: 82 LIEICRTKASPYNRCKASIYLVFDFC-EHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGL 138
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
Y+H + I+HRD+ + NVL+ D ++DFG+++
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 9/135 (6%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
Q E + L+H N+V+ + +L+++ + G L + A + +S
Sbjct: 54 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEA 110
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA---HVSDFGISKFLKPDS 623
+ I+ + + + H +VHR++ +N+LL ++DFG++ ++ +
Sbjct: 111 DASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167
Query: 624 SNWSEFVGTFGYVAP 638
W F GT GY++P
Sbjct: 168 QAWFGFAGTPGYLSP 182
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 513 EIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNV 571
E++ + L H +V + +SF + F++ + L G L L + E TV++ +
Sbjct: 65 ELQIMQGLEHPFLVNLW-YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKE--ETVKLFI 121
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVG 631
+ V L Y+ + I+HRD+ N+LL H++DF I+ L P + + G
Sbjct: 122 CELVM-ALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMAG 176
Query: 632 TFGYVAP 638
T Y+AP
Sbjct: 177 TKPYMAP 183
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 10/192 (5%)
Query: 450 TFEGKILYEEVIRATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQ 508
TF + L + + + +G+ SV + ++ S +AVKK P ++ +
Sbjct: 36 TFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAK 95
Query: 509 AFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWT 566
E++ L ++H NV+ F P S + YL + L+N + +
Sbjct: 96 RTYRELRLLKHMKHENVIGLLDV-FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 154
Query: 567 VRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+I + L Y+H I+HRD+ N+ + D + + DFG+++ + +
Sbjct: 155 HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG- 210
Query: 627 SEFVGTFGYVAP 638
+V T Y AP
Sbjct: 211 --YVATRWYRAP 220
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 24/171 (14%)
Query: 474 GTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFS 532
G A+ Y I K D ++A +E+K +T+L H N+V G
Sbjct: 59 GKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC 118
Query: 533 FHPRQSFLLYEYLGRGSLAIILSNDA---AIDEFSWTVR--------MNVIK-------- 573
+L++EY G L L + + DE + + +NV+
Sbjct: 119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFA 178
Query: 574 -SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
VA + ++ F VHRD++++NVL+ + DFG+++ + DS
Sbjct: 179 YQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 226
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 517 LTELRHRNVVKF-YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
L E++H +V Y F + +L+ EYL G L + L + E + + +
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKL-YLILEYLSGGELFMQLEREGIFMEDTACF---YLAEI 130
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
+ L ++H I++RD+ +N++L ++DFG+ K D + F GT Y
Sbjct: 131 SMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEY 187
Query: 636 VAP 638
+AP
Sbjct: 188 MAP 190
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 517 LTELRHRNVVKF-YGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
L E++H +V Y F + +L+ EYL G L + L + E + + +
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKL-YLILEYLSGGELFMQLEREGIFMEDTACF---YLAEI 130
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
+ L ++H I++RD+ +N++L ++DFG+ K D + F GT Y
Sbjct: 131 SMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEY 187
Query: 636 VAP 638
+AP
Sbjct: 188 MAP 190
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 469 AKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVV- 526
AK GT G+ V+KA + + VA+KK + EIK L L+H NVV
Sbjct: 24 AKIGQGTFGE--VFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 527 -------KFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
K ++ +L++++ LA +LSN + +F+ + V++ + N L
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGL 138
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
Y+H + I+HRD+ + NVL+ D ++DFG+++
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 53/241 (21%)
Query: 12 VHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVP 71
V S+ IP I ++ K LD+ +N+LS + + LT L+ LY+N NKL+ ++P
Sbjct: 21 VDCSSKKLTAIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLP 77
Query: 72 REV-GQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQ 130
+ +L +L+ L + N L F L NLA L L NQ
Sbjct: 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLA-----------------ELRLDRNQ 120
Query: 131 LSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSI-SN 189
L P L+ L L LG N L LP +
Sbjct: 121 LKSLPPRVFDSLTKLTYLSLGYNEL-------------------------QSLPKGVFDK 155
Query: 190 LSNLEGLYLYSSLVS----AEIGNLLQLIELEIDNKQLFGQIPK-SLRNFTSLNIVHLEQ 244
L++L+ L LY++ + L +L L++DN QL ++P+ + + L ++ L++
Sbjct: 156 LTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQL-KRVPEGAFDSLEKLKMLQLQE 214
Query: 245 N 245
N
Sbjct: 215 N 215
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLY-- 86
+++LK L + NNQL V D LT LK L ++ N+L+ L LK L L
Sbjct: 156 LTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Query: 87 -----CNG---LSGWL 94
CNG ++ WL
Sbjct: 216 PWDCTCNGIIYMAKWL 231
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 17/155 (10%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP-----RQSFLLYEYLG 546
VA+KK SP Q EI+ L RH NV+ R +++ + +
Sbjct: 71 VAIKKI-SPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLME 129
Query: 547 RGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY 606
++ S + D + + + L Y+H ++HRD+ N+L+
Sbjct: 130 TDLYKLLKSQQLSNDHICY-----FLYQILRGLKYIHSAN---VLHRDLKPSNLLINTTC 181
Query: 607 DAHVSDFGISKFLKPDSSN---WSEFVGTFGYVAP 638
D + DFG+++ P+ + +E V T Y AP
Sbjct: 182 DLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 469 AKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVV- 526
AK GT G+ V+KA + + VA+KK + EIK L L+H NVV
Sbjct: 24 AKIGQGTFGE--VFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 527 -------KFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
K ++ +L++++ LA +LSN + +F+ + V++ + N L
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGL 138
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
Y+H + I+HRD+ + NVL+ D ++DFG+++
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 20/148 (13%)
Query: 492 VAVKKFHS-PHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK S H D ++A +E+K ++ L +H N+V G H ++ EY G
Sbjct: 79 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 550 LAIILSNDAAID-EFSWTVRMN------------VIKSVANTLSYMHHDYFPPIVHRDIS 596
L L E+S+ N VA ++++ +HRD++
Sbjct: 137 LLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKN---CIHRDVA 193
Query: 597 SKNVLLGLDYDAHVSDFGISKFLKPDSS 624
++NVLL + A + DFG+++ + DS+
Sbjct: 194 ARNVLLTNGHVAKIGDFGLARDIMNDSN 221
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 469 AKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVV- 526
AK GT G+ V+KA + + VA+KK + EIK L L+H NVV
Sbjct: 23 AKIGQGTFGE--VFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 80
Query: 527 -------KFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTL 579
K ++ +L++++ LA +LSN + +F+ + V++ + N L
Sbjct: 81 LIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGL 137
Query: 580 SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
Y+H + I+HRD+ + NVL+ D ++DFG+++
Sbjct: 138 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 76/199 (38%), Gaps = 47/199 (23%)
Query: 473 IGTAGQASVYKA----ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKF 528
IG+ G V+KA + ++ I VK + E+KAL +L H N+V +
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVK---------YNNEKAEREVKALAKLDHVNIVHY 70
Query: 529 ----YGFSFHPRQS-------------------------FLLYEYLGRGSLAIILSNDAA 559
GF + P S F+ E+ +G+L +
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 560 IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619
++ + + + + + + Y+H ++HRD+ N+ L + DFG+ L
Sbjct: 131 -EKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 620 KPDSSNWSEFVGTFGYVAP 638
K D + GT Y++P
Sbjct: 187 KNDGKR-TRSKGTLRYMSP 204
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + DF +++ + + +V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTG---YVATRWYRAP 191
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 18/175 (10%)
Query: 472 CIGTAGQASVYKAELPSWE----IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVK 527
CIG V++ S E VA+K + D V++ F E + + H ++VK
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD-SVREKFLQEALTMRQFDHPHIVK 75
Query: 528 FYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKS--VANTLSYMHHD 585
G +++ E G L L + +FS + ++ + ++ L+Y+
Sbjct: 76 LIGV-ITENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLESK 130
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTF--GYVAP 638
F VHRDI+++NVL+ + DFG+S++++ DS+ + G ++AP
Sbjct: 131 RF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAP 181
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
AT+ ++ IG +VYKA P S VA+K P+ + + + E+ L L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 522 ---HRNVVKFYGFSFHPR-----QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIK 573
H NVV+ R + L++E++ + L L + T++ ++++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-DLMR 119
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
L ++H + IVHRD+ +N+L+ ++DFG+++
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
AT+ ++ IG +VYKA P S VA+K P+ + + + E+ L L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 522 ---HRNVVKFYGFSFHPR-----QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIK 573
H NVV+ R + L++E++ + L L + T++ ++++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-DLMR 119
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
L ++H + IVHRD+ +N+L+ ++DFG+++
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 505 VVQQAFSNE-----IKALTELRHRNVVKFYGFSFHPRQSF-LLYEYLGRGSLAIILSNDA 558
+VQ+A + E + L +R + ++F L+ +Y+ G L LS
Sbjct: 95 IVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE 154
Query: 559 AIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHV--SDFGIS 616
E + + + L ++H I++RDI +N+L LD + HV +DFG+S
Sbjct: 155 RFTEHEVQI---YVGEIVLALEHLHK---LGIIYRDIKLENIL--LDSNGHVVLTDFGLS 206
Query: 617 K-FLKPDSSNWSEFVGTFGYVAP 638
K F+ ++ +F GT Y+AP
Sbjct: 207 KEFVADETERAYDFCGTIEYMAP 229
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
AT+ ++ IG +VYKA P S VA+K P+ + + + E+ L L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 522 ---HRNVVKFYGFSFHPR-----QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIK 573
H NVV+ R + L++E++ + L L + T++ ++++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-DLMR 119
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
L ++H + IVHRD+ +N+L+ ++DFG+++
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 472 CIGTAGQASVYKAELPSWE----IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVK 527
CIG V++ S E VA+K + D V ++ F E + + H ++VK
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVK 455
Query: 528 FYG-FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKS--VANTLSYMHH 584
G + +P +++ E G L L + +FS + ++ + ++ L+Y+
Sbjct: 456 LIGVITENP--VWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLES 509
Query: 585 DYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTF--GYVAP 638
F VHRDI+++NVL+ + + DFG+S++++ DS+ + G ++AP
Sbjct: 510 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAP 561
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 449 LTFEGKILYEEVIRATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQ 507
L F+G I+ + ++ +N++ K+ IG VY A + + + VA+KK + D++
Sbjct: 14 LYFQGAII--KNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDC 71
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILS-NDAAIDEFSWT 566
+ EI L L+ +++ + + + L L I+L D+ + + T
Sbjct: 72 KRILREITILNRLKSDYIIRLHDL-------IIPEDLLKFDELYIVLEIADSDLKKLFKT 124
Query: 567 ---VRMNVIKSVANTL----SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619
+ +K++ L ++H I+HRD+ N LL D + DFG+++ +
Sbjct: 125 PIFLTEQHVKTILYNLLLGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTI 181
Query: 620 KPDSS 624
D
Sbjct: 182 NSDKD 186
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + FG+++ + + +V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTG---YVATRWYRAP 191
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 472 CIGTAGQASVYKAELPSWE----IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVK 527
CIG V++ S E VA+K + D V ++ F E + + H ++VK
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVK 455
Query: 528 FYG-FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKS--VANTLSYMHH 584
G + +P +++ E G L L + +FS + ++ + ++ L+Y+
Sbjct: 456 LIGVITENP--VWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLES 509
Query: 585 DYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTF--GYVAP 638
F VHRDI+++NVL+ + DFG+S++++ DS+ + G ++AP
Sbjct: 510 KRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAP 561
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + D G+++ + + +V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTG---YVATRWYRAP 191
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 17/156 (10%)
Query: 472 CIGTAGQASVYKAELPSWE----IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVK 527
CIG V++ S E VA+K + D V++ F E + + H ++VK
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD-SVREKFLQEALTMRQFDHPHIVK 75
Query: 528 FYG-FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKS--VANTLSYMHH 584
G + +P +++ E G L L + +FS + ++ + ++ L+Y+
Sbjct: 76 LIGVITENP--VWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLES 129
Query: 585 DYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620
F VHRDI+++NVL+ + + DFG+S++++
Sbjct: 130 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME 162
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + D G+++ + + +V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTG---YVATRWYRAP 191
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 78/177 (44%), Gaps = 11/177 (6%)
Query: 465 NNFDAKYCIGTAGQASVYK-AELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
+++D +GT V++ E + A K +PH ++ EI+ ++ LRH
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLRHP 214
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
+V + + ++YE++ G L ++++ ++ S + ++ V L +MH
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMH 272
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVS--DFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ + VH D+ +N++ + DFG++ L P S GT + AP
Sbjct: 273 ENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-KVTTGTAEFAAP 325
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 135/345 (39%), Gaps = 48/345 (13%)
Query: 19 FAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLS 78
F +P I + + LD+G N++ + E HL+ L +N N + P L
Sbjct: 23 FVAVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLF 80
Query: 79 SLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQLSGSIPHF 138
+L+ L L N L F L+NL LD+SEN++ + +
Sbjct: 81 NLRTLGLRSNRLKLIPLGVFTGLSNLT-----------------KLDISENKIVILLDYM 123
Query: 139 LGHLSNLAVLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSISNLSNLEGLYL 198
L NL L +GDN L + + ++S+L L L L
Sbjct: 124 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 183
Query: 199 YSSLVSA----EIGNLLQLIELEIDN-KQLFGQIPKSLR--NFTSLNIVHLEQNHLTGNI 251
++A L +L LEI + L P L N TSL+I H +LT
Sbjct: 184 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHC---NLTAVP 240
Query: 252 YEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELP 311
Y L FL+LS N ++ SM L++L +L + + G+L
Sbjct: 241 YLAVRHLVYLRFLNLSYNPI-STIEGSM-------------LHELLRLQ-EIQLVGGQLA 285
Query: 312 -IELGNLKSLNY-RALN--GNKVYGSLPRVLGSISDLEYLDLSTN 352
+E + LNY R LN GN++ V S+ +LE L L +N
Sbjct: 286 VVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 20/162 (12%)
Query: 490 EIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR----QSFLLYEYL 545
E VAVK F + ++ EI +RH N++ F Q +L+ +Y
Sbjct: 61 EKVAVKVFFTTEEASWFRE---TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117
Query: 546 GRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYF-----PPIVHRDISSKNV 600
GSL L + +D S + + S + L ++H + F P I HRD+ SKN+
Sbjct: 118 ENGSLYDYLKS-TTLDAKS---MLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNI 173
Query: 601 LLGLDYDAHVSDFGISKFLKPDSSNW----SEFVGTFGYVAP 638
L+ + ++D G++ D++ + VGT Y+ P
Sbjct: 174 LVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 78/177 (44%), Gaps = 11/177 (6%)
Query: 465 NNFDAKYCIGTAGQASVYK-AELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
+++D +GT V++ E + A K +PH ++ EI+ ++ LRH
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLRHP 108
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
+V + + ++YE++ G L ++++ ++ S + ++ V L +MH
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMH 166
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDAHVS--DFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ + VH D+ +N++ + DFG++ L P S GT + AP
Sbjct: 167 ENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-VKVTTGTAEFAAP 219
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 58/133 (43%), Gaps = 20/133 (15%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQLSSLKQLVLYC 87
++NL +L + NQL + D LT+LK L + N+L+ S+P V +L++L L LY
Sbjct: 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLYLYH 142
Query: 88 NGLSGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQLSGSIPHFLGHLSNLAV 147
N L F L NL LDL NQL L+ L
Sbjct: 143 NQLQSLPKGVFDKLTNLT-----------------RLDLDNNQLQSLPEGVFDKLTQLKQ 185
Query: 148 LHLGDNSLFGSIP 160
L L DN L S+P
Sbjct: 186 LSLNDNQL-KSVP 197
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQLSSLKQLVLYC 87
++NL LD+ NNQL + D LT LK L +N N+L+ SVP V +L+SL + L
Sbjct: 156 LTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLK-SVPDGVFDRLTSLTHIWLLN 214
Query: 88 N 88
N
Sbjct: 215 N 215
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQLSSLKQLVLYC 87
++NL +L + +NQL + D LT+L L ++ N+L+ S+P V +L+ LKQL L
Sbjct: 132 LTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SLPEGVFDKLTQLKQLSLND 190
Query: 88 NGLSGWLPSSFGNLNNLA 105
N L F L +L
Sbjct: 191 NQLKSVPDGVFDRLTSLT 208
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 13/172 (7%)
Query: 473 IGTAGQASVYK-AELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG SV K PS +I+AVK+ S + +Q + + +V+FYG
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 532 SFHPRQSFLLYEYLGRG-----SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDY 586
F ++ E + + +D +E + + +K++ + +
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK--- 146
Query: 587 FPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRDI N+LL + + DFGIS L DS + G Y+AP
Sbjct: 147 ---IIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDAGCRPYMAP 194
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 570 NVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS 627
++ V+ + Y+ F VHRD++++NVLL + A +SDFG+SK L D S ++
Sbjct: 114 ELLHQVSMGMKYLEEKNF---VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 27/155 (17%)
Query: 492 VAVKKFHS-PHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
VAVK S H D ++A +E+K ++ L +H N+V G H ++ EY G
Sbjct: 64 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 121
Query: 550 LAIILSNDAAI------------------DEFSWTVR--MNVIKSVANTLSYMHHDYFPP 589
L L A D +R ++ VA ++++
Sbjct: 122 LLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN--- 178
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624
+HRD++++NVLL + A + DFG+++ + DS+
Sbjct: 179 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 213
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 10/169 (5%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + + VAVKK P ++ + E++ L ++H NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 532 SFHPRQSFLLYE--YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P +S + YL + L+N + + +I + L Y+H
Sbjct: 90 -FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+ + D + + D G+++ + + +V T Y AP
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTG---YVATRWYRAP 191
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 20/115 (17%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTV 567
+AF E+ A + RH NVV F G P + L +G + DA I +
Sbjct: 74 KAFKREVMAYRQTRHENVVLFMGACMSP-PHLAIITSLCKGRTLYSVVRDAKI-----VL 127
Query: 568 RMNVIKSVANT----LSYMHHDYFPPIVHRDISSKNVLLGLDYD---AHVSDFGI 615
+N + +A + Y+H I+H+D+ SKNV YD ++DFG+
Sbjct: 128 DVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVF----YDNGKVVITDFGL 175
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 510 FSNEIKALTELRHRNVVKFY--GFSFHPRQS--FLLYEYLGRGSLAIILSNDAAIDEFSW 565
F E + L H +V Y G + P +++ EY+ +L I+ + + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TP 115
Query: 566 TVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN 625
+ VI L++ H + I+HRD+ N+L+ V DFGI++ + DS N
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIA-DSGN 171
Query: 626 ----WSEFVGTFGYVAP 638
+ +GT Y++P
Sbjct: 172 SVXQTAAVIGTAQYLSP 188
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/115 (20%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL-------SNDAAIDE 562
F NE + +VV+ G + + ++ E + G L L N+
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ + + +A+ ++Y++ F VHRD++++N ++ D+ + DFG+++
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/115 (20%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL-------SNDAAIDE 562
F NE + +VV+ G + + ++ E + G L L N+
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ + + +A+ ++Y++ F VHRD++++N ++ D+ + DFG+++
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 472 CIGTAGQASVYKAELPSWE----IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVK 527
CIG V++ S E VA+K + D V++ F E + + H ++VK
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMRQFDHPHIVK 103
Query: 528 FYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKS--VANTLSYMHHD 585
G +++ E G L L + ++S + ++ + ++ L+Y+
Sbjct: 104 LIGV-ITENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLESK 158
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTF--GYVAP 638
F VHRDI+++NVL+ + + DFG+S++++ DS+ + G ++AP
Sbjct: 159 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAP 209
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/115 (20%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL-------SNDAAIDE 562
F NE + +VV+ G + + ++ E + G L L N+
Sbjct: 66 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 125
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ + + +A+ ++Y++ F VHRD++++N ++ D+ + DFG+++
Sbjct: 126 PTLQEMIQMAAEIADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 472 CIGTAGQASVYKAELPSWE----IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVK 527
CIG V++ S E VA+K + D V++ F E + + H ++VK
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMRQFDHPHIVK 75
Query: 528 FYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKS--VANTLSYMHHD 585
G +++ E G L L + ++S + ++ + ++ L+Y+
Sbjct: 76 LIGV-ITENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLESK 130
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTF--GYVAP 638
F VHRDI+++NVL+ + + DFG+S++++ DS+ + G ++AP
Sbjct: 131 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAP 181
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 11 VVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSV 70
+V+ N A +P I ++ + L + NNQ++ + P D L +L+ LY N NKL ++
Sbjct: 16 LVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AI 72
Query: 71 PREV-GQLSSLKQLVLYCNGLSGWLPSSFGNLNNL 104
P V +L+ L QL L N L +F NL +L
Sbjct: 73 PTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSL 107
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 15 SNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPR-E 73
+N + + P ++ NL+ L +N+L+ + D LT L L +N N L+ S+PR
Sbjct: 42 NNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLK-SIPRGA 100
Query: 74 VGQLSSLKQLVLYCN 88
L SL + LY N
Sbjct: 101 FDNLKSLTHIYLYNN 115
Score = 29.3 bits (64), Expect = 7.6, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 10 QVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVN 64
Q+ SN L AI ++ L LD+ +N L + D L L H+Y+ N
Sbjct: 61 QLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNN 115
Score = 28.9 bits (63), Expect = 10.0, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 4/114 (3%)
Query: 100 NLNNLAIGSMPXXXXXXXXXXXFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSI 159
N N+ + S+P L L+ NQ++ P HL NL L+ N L
Sbjct: 18 NCQNIRLASVPAGIPTDKQ----RLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIP 73
Query: 160 PPILGKVQXXXXXXXXXXXXXXVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQL 213
+ K+ + + NL +L +YLY++ E +++ L
Sbjct: 74 TGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDIMYL 127
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 472 CIGTAGQASVYKAELPSWE----IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVK 527
CIG V++ S E VA+K + D V++ F E + + H ++VK
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD-SVREKFLQEALTMRQFDHPHIVK 75
Query: 528 FYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKS--VANTLSYMHHD 585
G +++ E G L L + ++S + ++ + ++ L+Y+
Sbjct: 76 LIGV-ITENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLESK 130
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTF--GYVAP 638
F VHRDI+++NVL+ + + DFG+S++++ DS+ + G ++AP
Sbjct: 131 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAP 181
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 472 CIGTAGQASVYKAELPSWE----IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVK 527
CIG V++ S E VA+K + D V++ F E + + H ++VK
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMRQFDHPHIVK 80
Query: 528 FYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKS--VANTLSYMHHD 585
G +++ E G L L + ++S + ++ + ++ L+Y+
Sbjct: 81 LIGV-ITENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLESK 135
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTF--GYVAP 638
F VHRDI+++NVL+ + + DFG+S++++ DS+ + G ++AP
Sbjct: 136 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAP 186
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 109/245 (44%), Gaps = 36/245 (14%)
Query: 14 ESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPRE 73
++N + I N+ NL L + NN++S + P PL L+ LY++ N+L+ +P +
Sbjct: 60 QNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEK 118
Query: 74 VGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQL-- 131
+ + +L++L ++ N ++ S F LN + + ++L N L
Sbjct: 119 MPK--TLQELRVHENEITKVRKSVFNGLNQMIV-----------------VELGTNPLKS 159
Query: 132 SGSIPHFLGHLSNLAVLHLGDNSLFG---SIPPILGKVQXXXXXXXXXXXXXXVLPPSIS 188
SG + L+ + + D ++ +PP L ++ V S+
Sbjct: 160 SGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELH------LDGNKITKVDAASLK 213
Query: 189 NLSNLEGLYLYSSLVSA----EIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQ 244
L+NL L L + +SA + N L EL ++N +L ++P L + + +V+L
Sbjct: 214 GLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHN 272
Query: 245 NHLTG 249
N+++
Sbjct: 273 NNISA 277
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 472 CIGTAGQASVYKAELPSWE----IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVK 527
CIG V++ S E VA+K + D V++ F E + + H ++VK
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMRQFDHPHIVK 72
Query: 528 FYG-FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKS--VANTLSYMHH 584
G + +P +++ E G L L + ++S + ++ + ++ L+Y+
Sbjct: 73 LIGVITENP--VWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 126
Query: 585 DYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTF--GYVAP 638
F VHRDI+++NVL+ + + DFG+S++++ DS+ + G ++AP
Sbjct: 127 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAP 178
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 20/111 (18%)
Query: 28 NISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQLSSLKQLVLY 86
+++ L L + NNQL+ + D LT L LY+ N+L+ S+P V +L+ LK+L L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLN 139
Query: 87 CNGLSGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQLSGSIPH 137
N L +F L NL L LS NQL S+PH
Sbjct: 140 TNQLQSIPAGAFDKLTNLQT-----------------LSLSTNQLQ-SVPH 172
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 15 SNTLFAIIPPQI-GNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPRE 73
+N A +P + +++ L L +G NQL + D LT LK L +N N+L+
Sbjct: 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGA 150
Query: 74 VGQLSSLKQLVLYCNGLSGWLPSSFGNLNNL 104
+L++L+ L L N L +F L L
Sbjct: 151 FDKLTNLQTLSLSTNQLQSVPHGAFDRLGKL 181
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQLSSLKQLVLYC 87
++ LK L + NQL + D LT+L+ L ++ N+L+ SVP +L L+ + L+
Sbjct: 130 LTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFG 188
Query: 88 N 88
N
Sbjct: 189 N 189
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/115 (20%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL-------SNDAAIDE 562
F NE + +VV+ G + + ++ E + G L L N+
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 123
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ + + +A+ ++Y++ F VHRD++++N ++ D+ + DFG+++
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 20/111 (18%)
Query: 28 NISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQLSSLKQLVLY 86
+++ L L + NNQL+ + D LT L LY+ N+L+ S+P V +L+ LK+L L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLN 139
Query: 87 CNGLSGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQLSGSIPH 137
N L +F L NL L LS NQL S+PH
Sbjct: 140 TNQLQSIPAGAFDKLTNLQT-----------------LSLSTNQLQ-SVPH 172
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 15 SNTLFAIIPPQI-GNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPRE 73
+N A +P + +++ L L +G NQL + D LT LK L +N N+L+
Sbjct: 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGA 150
Query: 74 VGQLSSLKQLVLYCNGLSGWLPSSFGNLNNL 104
+L++L+ L L N L +F L L
Sbjct: 151 FDKLTNLQTLSLSTNQLQSVPHGAFDRLGKL 181
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQLSSLKQLVLYC 87
++ LK L + NQL + D LT+L+ L ++ N+L+ SVP +L L+ + L+
Sbjct: 130 LTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFG 188
Query: 88 N 88
N
Sbjct: 189 N 189
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/115 (20%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL-------SNDAAIDE 562
F NE + +VV+ G + + ++ E + G L L N+
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ + + +A+ ++Y++ F VHRD++++N ++ D+ + DFG+++
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 109/245 (44%), Gaps = 36/245 (14%)
Query: 14 ESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPRE 73
++N + I N+ NL L + NN++S + P PL L+ LY++ N+L+ +P +
Sbjct: 60 QNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEK 118
Query: 74 VGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQL-- 131
+ + +L++L ++ N ++ S F LN + + ++L N L
Sbjct: 119 MPK--TLQELRVHENEITKVRKSVFNGLNQMIV-----------------VELGTNPLKS 159
Query: 132 SGSIPHFLGHLSNLAVLHLGDNSLFG---SIPPILGKVQXXXXXXXXXXXXXXVLPPSIS 188
SG + L+ + + D ++ +PP L ++ V S+
Sbjct: 160 SGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELH------LDGNKITKVDAASLK 213
Query: 189 NLSNLEGLYLYSSLVSA----EIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQ 244
L+NL L L + +SA + N L EL ++N +L ++P L + + +V+L
Sbjct: 214 GLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHN 272
Query: 245 NHLTG 249
N+++
Sbjct: 273 NNISA 277
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 472 CIGTAGQASVYKAELPSWE----IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVK 527
CIG V++ S E VA+K + D V++ F E + + H ++VK
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMRQFDHPHIVK 78
Query: 528 FYG-FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKS--VANTLSYMHH 584
G + +P +++ E G L L + ++S + ++ + ++ L+Y+
Sbjct: 79 LIGVITENP--VWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 132
Query: 585 DYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTF--GYVAP 638
F VHRDI+++NVL+ + + DFG+S++++ DS+ + G ++AP
Sbjct: 133 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAP 184
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 472 CIGTAGQASVYKAELPSWE----IVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVK 527
CIG V++ S E VA+K + D V++ F E + + H ++VK
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMRQFDHPHIVK 77
Query: 528 FYG-FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKS--VANTLSYMHH 584
G + +P +++ E G L L + ++S + ++ + ++ L+Y+
Sbjct: 78 LIGVITENP--VWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLES 131
Query: 585 DYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTF--GYVAP 638
F VHRDI+++NVL+ + + DFG+S++++ DS+ + G ++AP
Sbjct: 132 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAP 183
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/115 (20%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL-------SNDAAIDE 562
F NE + +VV+ G + + ++ E + G L L N+
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ + + +A+ ++Y++ F VHRD++++N ++ D+ + DFG+++
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 510 FSNEIKALTELRHRNVVKFY--GFSFHPRQS--FLLYEYLGRGSLAIILSNDAAIDEFSW 565
F E + L H +V Y G + P +++ EY+ +L I+ + + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TP 115
Query: 566 TVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN 625
+ VI L++ H + I+HRD+ N+++ V DFGI++ + DS N
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGN 171
Query: 626 ----WSEFVGTFGYVAP 638
+ +GT Y++P
Sbjct: 172 SVTQTAAVIGTAQYLSP 188
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTV 567
++F +++L H+++V YG F ++ L+ E++ GSL L + W
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW-- 114
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA--------HVSDFGIS 616
++ V K +A + ++ + ++H ++ +KN+LL + D +SD GIS
Sbjct: 115 KLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 510 FSNEIKALTELRHRNVVKFY--GFSFHPRQS--FLLYEYLGRGSLAIILSNDAAIDEFSW 565
F E + L H +V Y G + P +++ EY+ +L I+ + + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TP 115
Query: 566 TVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN 625
+ VI L++ H + I+HRD+ N+++ V DFGI++ + DS N
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGN 171
Query: 626 ----WSEFVGTFGYVAP 638
+ +GT Y++P
Sbjct: 172 SVTQTAAVIGTAQYLSP 188
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 510 FSNEIKALTELRHRNVVKFY--GFSFHPRQS--FLLYEYLGRGSLAIILSNDAAIDEFSW 565
F E + L H +V Y G + P +++ EY+ +L I+ + + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TP 115
Query: 566 TVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN 625
+ VI L++ H + I+HRD+ N+++ V DFGI++ + DS N
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGN 171
Query: 626 ----WSEFVGTFGYVAP 638
+ +GT Y++P
Sbjct: 172 SVTQTAAVIGTAQYLSP 188
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSK 598
F + EYL G L + + +F + + L ++H IV+RD+
Sbjct: 95 FFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLD 148
Query: 599 NVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
N+LL D ++DFG+ K + +EF GT Y+AP
Sbjct: 149 NILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAP 188
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 44/209 (21%)
Query: 461 IRATNNFDAKYCIGTAGQASVYKAE--LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALT 518
+R ++F+ +G V KA L S A+KK H + + S E+ L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDS-RYYAIKKIR--HTEEKLSTILS-EVMLLA 57
Query: 519 ELRHRNVVKFYGFSFHPRQS-------------FLLYEYLGRGSLAIILSND---AAIDE 562
L H+ VV++Y R F+ EY +L ++ ++ DE
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK----- 617
+ W + + + LSY+H I+HRD+ N+ + + + DFG++K
Sbjct: 118 Y-W----RLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 618 --FLKPD-------SSNWSEFVGTFGYVA 637
LK D S N + +GT YVA
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVA 198
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 510 FSNEIKALTELRHRNVVKFY--GFSFHPRQS--FLLYEYLGRGSLAIILSNDAAIDEFSW 565
F E + L H +V Y G + P +++ EY+ +L I+ + + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TP 115
Query: 566 TVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN 625
+ VI L++ H + I+HRD+ N+++ V DFGI++ + DS N
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGN 171
Query: 626 ----WSEFVGTFGYVAP 638
+ +GT Y++P
Sbjct: 172 SVTQTAAVIGTAQYLSP 188
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 510 FSNEIKALTELRHRNVVKFY--GFSFHPRQS--FLLYEYLGRGSLAIILSNDAAIDEFSW 565
F E + L H +V Y G + P +++ EY+ +L I+ + + +
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TP 132
Query: 566 TVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN 625
+ VI L++ H + I+HRD+ N+++ V DFGI++ + DS N
Sbjct: 133 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGN 188
Query: 626 ----WSEFVGTFGYVAP 638
+ +GT Y++P
Sbjct: 189 SVTQTAAVIGTAQYLSP 205
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 37/324 (11%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCN 88
++NL ++ NNQL+ + P + LT L + +N N++ P + L++L L L+ N
Sbjct: 66 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 121
Query: 89 GLSGWLP-SSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLS-ENQLSGSIPHFLGHLSNLA 146
++ P + NLN L + S LS NQ++ P L +L+ L
Sbjct: 122 QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKP--LANLTTLE 179
Query: 147 VLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSISNLSNLEGLYLYSSLVS-- 204
L + N + S +L K+ + P I L+NL+ L L + +
Sbjct: 180 RLDISSNKV--SDISVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDI 235
Query: 205 AEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFL 264
+ +L L +L++ N Q+ P L T L + L N ++ NI + G+ LT L
Sbjct: 236 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQIS-NISPLAGLTA-LTNL 291
Query: 265 DLSQNNF-------------YGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELP 311
+L++N Y +L F NNI+ P + L +L +L F+ N+ V ++
Sbjct: 292 ELNENQLEDISPISNLKNLTYLTLYF--NNISDISP--VSSLTKLQRLFFA-NNKVSDVS 346
Query: 312 IELGNLKSLNYRALNGNKVYGSLP 335
L NL ++N+ + N++ P
Sbjct: 347 -SLANLTNINWLSAGHNQISDLTP 369
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 22/92 (23%)
Query: 26 IGNISNLKFLDMGNNQLSGVIP-----------------QEIDP---LTHLKHLYINVNK 65
+ +++NL LD+ NNQ+S + P I P LT L +L +N N+
Sbjct: 238 LASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQ 297
Query: 66 LRGSVPREVGQLSSLKQLVLYCNGLSGWLPSS 97
L P + L +L L LY N +S P S
Sbjct: 298 LEDISP--ISNLKNLTYLTLYFNNISDISPVS 327
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 513 EIKALTELRHRNVVKFYGFSFHPR-QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNV 571
E L E+ H +VK + ++F + +L+ ++L G L LS + E +V
Sbjct: 76 ERDILVEVNHPFIVKLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE------EDV 128
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVG 631
+A + H + I++RD+ +N+LL + ++DFG+SK F G
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG 188
Query: 632 TFGYVAP 638
T Y+AP
Sbjct: 189 TVEYMAP 195
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 37/324 (11%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCN 88
++NL ++ NNQL+ + P + LT L + +N N++ P + L++L L L+ N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 89 GLSGWLP-SSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLS-ENQLSGSIPHFLGHLSNLA 146
++ P + NLN L + S L+ NQ++ P L +L+ L
Sbjct: 118 QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKP--LANLTTLE 175
Query: 147 VLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSISNLSNLEGLYLYSSLVS-- 204
L + N + S +L K+ + P I L+NL+ L L + +
Sbjct: 176 RLDISSNKV--SDISVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDI 231
Query: 205 AEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFL 264
+ +L L +L++ N Q+ P L T L + L N ++ NI + G+ LT L
Sbjct: 232 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQIS-NISPLAGLTA-LTNL 287
Query: 265 DLSQNNF-------------YGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELP 311
+L++N Y +L F NNI+ P + L +L +L FS N+ V ++
Sbjct: 288 ELNENQLEDISPISNLKNLTYLTLYF--NNISDISP--VSSLTKLQRLFFS-NNKVSDVS 342
Query: 312 IELGNLKSLNYRALNGNKVYGSLP 335
L NL ++N+ + N++ P
Sbjct: 343 -SLANLTNINWLSAGHNQISDLTP 365
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 22/92 (23%)
Query: 26 IGNISNLKFLDMGNNQLSGVIP-----------------QEIDP---LTHLKHLYINVNK 65
+ +++NL LD+ NNQ+S + P I P LT L +L +N N+
Sbjct: 234 LASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQ 293
Query: 66 LRGSVPREVGQLSSLKQLVLYCNGLSGWLPSS 97
L P + L +L L LY N +S P S
Sbjct: 294 LEDISP--ISNLKNLTYLTLYFNNISDISPVS 323
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 513 EIKALTELRHRNVVKFYGFSFHPR-QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNV 571
E L E+ H +VK + ++F + +L+ ++L G L LS + E +V
Sbjct: 77 ERDILVEVNHPFIVKLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE------EDV 129
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVG 631
+A + H + I++RD+ +N+LL + ++DFG+SK F G
Sbjct: 130 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG 189
Query: 632 TFGYVAP 638
T Y+AP
Sbjct: 190 TVEYMAP 196
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 20/157 (12%)
Query: 488 SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGR 547
S E+VAVK + + EI LRH N+V+F P ++ EY
Sbjct: 42 SNELVAVKYIERGEK---IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASG 98
Query: 548 GSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607
G L + N FS + + + +SY H + HRD+ +N LL
Sbjct: 99 GELFERICNAG---RFSEDEARFFFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPA 152
Query: 608 AH--VSDFGISK----FLKPDSSNWSEFVGTFGYVAP 638
+ DFG SK +P S+ VGT Y+AP
Sbjct: 153 PRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAP 184
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM 569
F +E + + H ++V+ G P L+ + + G L + D + +
Sbjct: 87 FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHK--DNIGSQLLL 143
Query: 570 NVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS 627
N +A + Y+ +VHRD++++NVL+ ++DFG+++ L+ D ++
Sbjct: 144 NWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 198
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 22/126 (17%)
Query: 512 NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAI----------- 560
+E L ++ H +V+K YG L+ EY GSL L +
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 561 --------DEFSWTVRMNVIKSVANTLSY-MHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
DE + T M + S A +S M + +VHRD++++N+L+ +S
Sbjct: 135 NSSSLDHPDERALT--MGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKIS 192
Query: 612 DFGISK 617
DFG+S+
Sbjct: 193 DFGLSR 198
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 22/126 (17%)
Query: 512 NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAI----------- 560
+E L ++ H +V+K YG L+ EY GSL L +
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 561 --------DEFSWTVRMNVIKSVANTLSY-MHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
DE + T M + S A +S M + +VHRD++++N+L+ +S
Sbjct: 135 NSSSLDHPDERALT--MGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKIS 192
Query: 612 DFGISK 617
DFG+S+
Sbjct: 193 DFGLSR 198
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 22/126 (17%)
Query: 512 NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAI----------- 560
+E L ++ H +V+K YG L+ EY GSL L +
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 561 --------DEFSWTVRMNVIKSVANTLSY-MHHDYFPPIVHRDISSKNVLLGLDYDAHVS 611
DE + T M + S A +S M + +VHRD++++N+L+ +S
Sbjct: 135 NSSSLDHPDERALT--MGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKIS 192
Query: 612 DFGISK 617
DFG+S+
Sbjct: 193 DFGLSR 198
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 216 LEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSL 275
L++ N Q+F I ++ + L ++L N LT E+ + NL LDLS N
Sbjct: 229 LDLSNLQIFN-ISANIFKYDFLTRLYLNGNSLTELPAEIKNL-SNLRVLDLSHNRL---- 282
Query: 276 NFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLP 335
S+P ++G +QL F +++V LP E GNL +L + + GN +
Sbjct: 283 --------TSLPAELGSCFQLKYFYF-FDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFL 333
Query: 336 RVLGSIS 342
++L S
Sbjct: 334 KILTEKS 340
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 22 IPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLK 81
+P +I N+SNL+ LD+ +N+L+ +P E+ LK+ Y + + ++P E G L +L+
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYF-FDNMVTTLPWEFGNLCNLQ 319
Query: 82 QLVLYCNGL 90
L + N L
Sbjct: 320 FLGVEGNPL 328
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 27/145 (18%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSND--------A 558
+Q F E + L L+H N+V+FY +E +G I+L +
Sbjct: 69 RQRFKEEAEXLKGLQHPNIVRFYD----------SWESTVKGKKCIVLVTELXTSGTLKT 118
Query: 559 AIDEFSWTVRMNVIKS----VANTLSYMHHDYFPPIVHRDISSKNVLL-GLDYDAHVSDF 613
+ F ++ V++S + L ++H PPI+HRD+ N+ + G + D
Sbjct: 119 YLKRFK-VXKIKVLRSWCRQILKGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKIGDL 176
Query: 614 GISKFLKPDSSNWSEFVGTFGYVAP 638
G++ + +S +GT + AP
Sbjct: 177 GLATLKR--ASFAKAVIGTPEFXAP 199
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 10 QVVH-ESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRG 68
QV+H N + + P +++ L +L++ NQL+ + D LT L HL +++N+L+
Sbjct: 43 QVLHLYINQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKLTHLALHINQLK- 101
Query: 69 SVPREV-GQLSSLKQLVLYCN 88
S+P V L SL + L+ N
Sbjct: 102 SIPMGVFDNLKSLTHIYLFNN 122
Score = 32.0 bits (71), Expect = 0.95, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 40 NQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFG 99
NQ++ + P D LT L +L + VN+L +L+ L L L+ N L F
Sbjct: 50 NQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKLTHLALHINQLKSIPMGVFD 109
Query: 100 NLNNL 104
NL +L
Sbjct: 110 NLKSL 114
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + S E VA+KK P + + E+ L ++H NV+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 532 SFHPRQSFL-LYE-YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P S Y+ YL + L + EFS ++ + L Y+H
Sbjct: 110 -FTPASSLRNFYDFYLVMPFMQTDLQKIMGM-EFSEEKIQYLVYQMLKGLKYIHS---AG 164
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+VHRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 165 VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG---YVVTRWYRAP 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E+RH N++ + + L+ E + G L L+ ++ E
Sbjct: 71 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE 130
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + + + Y+H I H D+ +N++L LD + + DFGI+ +
Sbjct: 131 AT---QFLKQILDGVHYLHS---KRIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKI 183
Query: 620 KPDSSNWSEFVGTFGYVAP 638
+ + + GT +VAP
Sbjct: 184 EA-GNEFKNIFGTPEFVAP 201
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Query: 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR 521
AT+ ++ IG +VYKA P S VA+K P+ + ++ + LR
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 522 ------HRNVVKFYGFSFHPR-----QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
H NVV+ R + L++E++ + L L + T++ +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-D 124
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKF 618
+++ L ++H + IVHRD+ +N+L+ ++DFG+++
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 169
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 513 EIKALTELRHRNVVKFYGFSFHPR-QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNV 571
E L E+ H +VK + ++F + +L+ ++L G L LS + E +V
Sbjct: 76 ERDILVEVNHPFIVKLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE------EDV 128
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVG 631
+A + H + I++RD+ +N+LL + ++DFG+SK F G
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG 188
Query: 632 TFGYVAP 638
T Y+AP
Sbjct: 189 TVEYMAP 195
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 142/324 (43%), Gaps = 37/324 (11%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCN 88
++NL ++ NNQL+ + P + LT L + +N N++ P + L++L L L+ N
Sbjct: 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 122
Query: 89 GLSGWLP-SSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLS-ENQLSGSIPHFLGHLSNLA 146
++ P + NLN L + S LS NQ++ P L +L+ L
Sbjct: 123 QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKP--LANLTTLE 180
Query: 147 VLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSISNLSNLEGLYLYSSLVS-- 204
L + N + S +L K+ + P I L+NL+ L L + +
Sbjct: 181 RLDISSNKV--SDISVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDI 236
Query: 205 AEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFL 264
+ +L L +L++ N Q+ P L T L + L N ++ NI + G+ LT L
Sbjct: 237 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQIS-NISPLAGLTA-LTNL 292
Query: 265 DLSQNNF-------------YGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELP 311
+L++N Y +L F NNI+ P + L +L +L F N+ V ++
Sbjct: 293 ELNENQLEDISPISNLKNLTYLTLYF--NNISDISP--VSSLTKLQRL-FFYNNKVSDVS 347
Query: 312 IELGNLKSLNYRALNGNKVYGSLP 335
L NL ++N+ + N++ P
Sbjct: 348 -SLANLTNINWLSAGHNQISDLTP 370
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 22/92 (23%)
Query: 26 IGNISNLKFLDMGNNQLSGVIP-----------------QEIDP---LTHLKHLYINVNK 65
+ +++NL LD+ NNQ+S + P I P LT L +L +N N+
Sbjct: 239 LASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQ 298
Query: 66 LRGSVPREVGQLSSLKQLVLYCNGLSGWLPSS 97
L P + L +L L LY N +S P S
Sbjct: 299 LEDISP--ISNLKNLTYLTLYFNNISDISPVS 328
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 20/155 (12%)
Query: 490 EIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
E+VAVK + + EI LRH N+V+F P ++ EY G
Sbjct: 45 ELVAVKYIERGEK---IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
L + N FS + + + +SY H + HRD+ +N LL
Sbjct: 102 LFERICNAG---RFSEDEARFFFQQLISGVSYAHAMQ---VAHRDLKLENTLLDGSPAPR 155
Query: 610 --VSDFGISK----FLKPDSSNWSEFVGTFGYVAP 638
++DFG SK +P S+ VGT Y+AP
Sbjct: 156 LKIADFGYSKASVLHSQPKSA-----VGTPAYIAP 185
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E+RH N++ + + L+ E + G L L+ ++ E
Sbjct: 50 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE 109
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + + + Y+H I H D+ +N++L LD + + DFGI+ +
Sbjct: 110 AT---QFLKQILDGVHYLHSKR---IAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKI 162
Query: 620 KPDSSNWSEFVGTFGYVAP 638
+ + + GT +VAP
Sbjct: 163 EA-GNEFKNIFGTPEFVAP 180
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E+RH N++ + + L+ E + G L L+ ++ E
Sbjct: 57 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE 116
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + + + Y+H I H D+ +N++L LD + + DFGI+ +
Sbjct: 117 AT---QFLKQILDGVHYLHSKR---IAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKI 169
Query: 620 KPDSSNWSEFVGTFGYVAP 638
+ + + GT +VAP
Sbjct: 170 EA-GNEFKNIFGTPEFVAP 187
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM 569
F +E + + H ++V+ G P L+ + + G L + D + +
Sbjct: 64 FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHK--DNIGSQLLL 120
Query: 570 NVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS 627
N +A + Y+ +VHRD++++NVL+ ++DFG+++ L+ D ++
Sbjct: 121 NWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 175
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 16 NTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEI-DPLTHLKHLYINVNKLRGSVPREV 74
N + + P ++ L LD+ NNQL+ V+P + D LT L L +N N+L+ S+PR
Sbjct: 48 NQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDNQLK-SIPR-- 103
Query: 75 GQLSSLKQL 83
G +LK L
Sbjct: 104 GAFDNLKSL 112
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 15 SNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV 74
S A +P I + + +L +NQ++ + P D LT L L ++ N+L
Sbjct: 25 SGKSLASVPTGIPTTTQVLYL--YDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVF 82
Query: 75 GQLSSLKQLVLYCNGLSGWLPSSFGNLNNL 104
+L+ L QL L N L +F NL +L
Sbjct: 83 DKLTQLTQLSLNDNQLKSIPRGAFDNLKSL 112
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I++RD+ NV+L + ++DFG+ K D EF GT Y+AP
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAP 189
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Query: 535 PRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRD 594
P + F + E++ G L + DE + + L ++H I++RD
Sbjct: 96 PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF---YAAEIISALMFLHDK---GIIYRD 149
Query: 595 ISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ NVLL + ++DFG+ K + + F GT Y+AP
Sbjct: 150 LKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAP 193
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 81/214 (37%), Gaps = 62/214 (28%)
Query: 465 NNFDAKYCIGTAGQASVYKAE---------------------LPSWEIVAVKKFHSPHPD 503
+ D+K CI Q KA+ +PS +I+AVK+ +
Sbjct: 31 RDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRA---- 86
Query: 504 MVVQQAFSNEIKALT---ELRHRNV-----VKFYGFSFHPRQSFLLYEYLGRGSLAIILS 555
S E K L ++ R V V FYG F ++ E +
Sbjct: 87 ----TVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM---------- 132
Query: 556 NDAAIDEF-------SWTVRMNVIKSVA----NTLSYMHHDYFPPIVHRDISSKNVLLGL 604
D ++D+F T+ +++ +A L ++H ++HRD+ NVL+
Sbjct: 133 -DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINA 189
Query: 605 DYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ DFGIS +L DS + G Y+AP
Sbjct: 190 LGQVKMCDFGISGYLV-DSVAKTIDAGCKPYMAP 222
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 570 NVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWS 627
++ V+ + Y+ F VHR+++++NVLL + A +SDFG+SK L D S ++
Sbjct: 440 ELLHQVSMGMKYLEEKNF---VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 16 NTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEI-DPLTHLKHLYINVNKLRGSVPREV 74
N + + P ++ L LD+ NNQL+ V+P + D LT L L +N N+L+ S+PR
Sbjct: 40 NQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDNQLK-SIPR-- 95
Query: 75 GQLSSLKQL 83
G +LK L
Sbjct: 96 GAFDNLKSL 104
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 15 SNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV 74
S A +P I + + +L +NQ++ + P D LT L L ++ N+L
Sbjct: 17 SGKSLASVPTGIPTTTQVLYL--YDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVF 74
Query: 75 GQLSSLKQLVLYCNGLSGWLPSSFGNLNNL 104
+L+ L QL L N L +F NL +L
Sbjct: 75 DKLTQLTQLSLNDNQLKSIPRGAFDNLKSL 104
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 19/166 (11%)
Query: 461 IRATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTE 519
+ +N+ K+ IG VY A + E VA+KK + D++ + EI L
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNR 81
Query: 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILS-NDAAIDEFSWT---VRMNVIKSV 575
L+ +++ Y + + L L I+L D+ + + T + IK++
Sbjct: 82 LKSDYIIRLYDL-------IIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTI 134
Query: 576 ANTL----SYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
L +++H I+HRD+ N LL D V DFG+++
Sbjct: 135 LYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 86/222 (38%), Gaps = 61/222 (27%)
Query: 446 FSILTFEGKILYEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMV 505
F + G+ + +V++A N D++Y A+KK H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYY--------------------AIKKIR--HTEEK 45
Query: 506 VQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS-------------FLLYEYLGRGSLAI 552
+ S E+ L L H+ VV++Y R F+ EY +L
Sbjct: 46 LSTILS-EVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYD 104
Query: 553 ILSND---AAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
++ ++ DE+ W + + + LSY+H I+HR++ N+ + +
Sbjct: 105 LIHSENLNQQRDEY-W----RLFRQILEALSYIHSQ---GIIHRNLKPXNIFIDESRNVK 156
Query: 610 VSDFGISK-------FLKPD-------SSNWSEFVGTFGYVA 637
+ DFG++K LK D S N + +GT YVA
Sbjct: 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVA 198
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 467 FDAKYCIGTAGQASVYK-AELPSWEIVAVKKFH---SPHPDMVVQQAFSNEIKALTELRH 522
++ K +GT G V + + E VA+K+ SP ++ + EI+ + +L H
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKN----RERWCLEIQIMKKLNH 72
Query: 523 RNVVKFYGF-----SFHPRQ-SFLLYEYLGRGSLAIIL---SNDAAIDEFSWTVRMNVIK 573
NVV P L EY G L L N + E +R ++
Sbjct: 73 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP--IR-TLLS 129
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLL--GLDYDAH-VSDFGISKFLKPDSSNWSEFV 630
+++ L Y+H + I+HRD+ +N++L G H + D G +K L +EFV
Sbjct: 130 DISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFV 185
Query: 631 GTFGYVAP 638
GT Y+AP
Sbjct: 186 GTLQYLAP 193
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 26/191 (13%)
Query: 460 VIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFS---NEIKA 516
VI +F K +G + ++ + VAVK+ ++ + FS E++
Sbjct: 19 VIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKR--------ILPECFSFADREVQL 70
Query: 517 LTEL-RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV 575
L E H NV++++ + RQ ++Y+ A L +F+ + + I +
Sbjct: 71 LRESDEHPNVIRYF-CTEKDRQ----FQYIAIELCAATLQEYVEQKDFAH-LGLEPITLL 124
Query: 576 ANTLSYMHHDYFPPIVHRDISSKNVLLGL-----DYDAHVSDFGISKFL---KPDSSNWS 627
T S + H + IVHRD+ N+L+ + A +SDFG+ K L + S S
Sbjct: 125 QQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 628 EFVGTFGYVAP 638
GT G++AP
Sbjct: 185 GVPGTEGWIAP 195
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 508 QAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTV 567
++F +++L H+++V YG ++ L+ E++ GSL L + W
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW-- 114
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA--------HVSDFGIS 616
++ V K +A + ++ + ++H ++ +KN+LL + D +SD GIS
Sbjct: 115 KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 62/157 (39%), Gaps = 20/157 (12%)
Query: 488 SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGR 547
S E+VAVK + EI LRH N+V+F P ++ EY
Sbjct: 43 SNELVAVKYIERGEK---IAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASG 99
Query: 548 GSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607
G L + N FS + + + +SY H + HRD+ +N LL
Sbjct: 100 GELFERICNAG---RFSEDEARFFFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPA 153
Query: 608 AH--VSDFGISK----FLKPDSSNWSEFVGTFGYVAP 638
+ DFG SK +P S+ VGT Y+AP
Sbjct: 154 PRLKICDFGYSKSSVLHSQPKST-----VGTPAYIAP 185
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Query: 492 VAVKKF-HSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
V V KF ++P+P + + NEI + +L H ++ + + L+ E+L G L
Sbjct: 78 VFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 135
Query: 551 AIILSNDAAID-EFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609
AA D + S +N ++ L +MH IVH DI +N++ +
Sbjct: 136 ---FDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASS 189
Query: 610 VS--DFGISKFLKPDS 623
V DFG++ L PD
Sbjct: 190 VKIIDFGLATKLNPDE 205
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 467 FDAKYCIGTAGQASVYK-AELPSWEIVAVKKFH---SPHPDMVVQQAFSNEIKALTELRH 522
++ K +GT G V + + E VA+K+ SP ++ + EI+ + +L H
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKN----RERWCLEIQIMKKLNH 71
Query: 523 RNVVKFYGF-----SFHPRQ-SFLLYEYLGRGSLAIIL---SNDAAIDEFSWTVRMNVIK 573
NVV P L EY G L L N + E +R ++
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP--IR-TLLS 128
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLL--GLDYDAH-VSDFGISKFLKPDSSNWSEFV 630
+++ L Y+H + I+HRD+ +N++L G H + D G +K L +EFV
Sbjct: 129 DISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFV 184
Query: 631 GTFGYVAP 638
GT Y+AP
Sbjct: 185 GTLQYLAP 192
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/115 (19%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL-------SNDAAIDE 562
F NE + +VV+ G + + ++ E + G L L N+
Sbjct: 68 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 127
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ + + +A+ ++Y++ F VHR+++++N ++ D+ + DFG+++
Sbjct: 128 PTLQEMIQMAAEIADGMAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTR 179
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 513 EIKALTELRHRNVVKFYGFSFHPR-QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNV 571
E L ++ H VVK + ++F + +L+ ++L G L LS + E +V
Sbjct: 80 ERDILADVNHPFVVKLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE------EDV 132
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVG 631
+A + H + I++RD+ +N+LL + ++DFG+SK F G
Sbjct: 133 KFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCG 192
Query: 632 TFGYVAP 638
T Y+AP
Sbjct: 193 TVEYMAP 199
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 14/120 (11%)
Query: 503 DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQ-SFLLYEYLGRGSLAIILS----ND 557
+M +AF E + L H NV+ G P +L Y+ G L + N
Sbjct: 62 EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP 121
Query: 558 AAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
D S+ ++ VA + Y+ F VHRD++++N +L + V+DFG+++
Sbjct: 122 TVKDLISFGLQ------VARGMEYLAEQKF---VHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Query: 511 SNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
EI+ L LRH+NV++ ++ ++ +++ EY G ++ + F
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML--DSVPEKRFPVCQA 111
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN 625
+ + L Y+H IVH+DI N+LL +S G+++ L P +++
Sbjct: 112 HGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD 165
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/115 (19%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL-------SNDAAIDE 562
F NE + +VV+ G + + ++ E + G L L N+
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 563 FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ + + +A+ ++Y++ F VHR+++++N ++ D+ + DFG+++
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHV--SDFGISKFLKPDSSNWSEFVG 631
+A+ L Y+H IV+RD+ +N+L LD H+ +DFG+ K +S S F G
Sbjct: 147 EIASALGYLHSLN---IVYRDLKPENIL--LDSQGHIVLTDFGLCKENIEHNSTTSTFCG 201
Query: 632 TFGYVAP 638
T Y+AP
Sbjct: 202 TPEYLAP 208
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 142/324 (43%), Gaps = 37/324 (11%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCN 88
++NL ++ NNQL+ + P + LT L + +N N++ P + L++L L L+ N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 89 GLSGWLP-SSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLS-ENQLSGSIPHFLGHLSNLA 146
++ P + NLN L + S L+ NQ++ P L +L+ L
Sbjct: 118 QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKP--LANLTTLE 175
Query: 147 VLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSISNLSNLEGLYLYSSLVS-- 204
L + N + S +L K+ + P I L+NL+ L L + +
Sbjct: 176 RLDISSNKV--SDISVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDI 231
Query: 205 AEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFL 264
+ +L L +L++ N Q+ P L T L + L N ++ NI + G+ LT L
Sbjct: 232 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQIS-NISPLAGLTA-LTNL 287
Query: 265 DLSQNNF-------------YGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELP 311
+L++N Y +L F NNI+ P + L +L +L F N+ V ++
Sbjct: 288 ELNENQLEDISPISNLKNLTYLTLYF--NNISDISP--VSSLTKLQRL-FFYNNKVSDVS 342
Query: 312 IELGNLKSLNYRALNGNKVYGSLP 335
L NL ++N+ + N++ P
Sbjct: 343 -SLANLTNINWLSAGHNQISDLTP 365
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 22/92 (23%)
Query: 26 IGNISNLKFLDMGNNQLSGVIP-----------------QEIDP---LTHLKHLYINVNK 65
+ +++NL LD+ NNQ+S + P I P LT L +L +N N+
Sbjct: 234 LASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQ 293
Query: 66 LRGSVPREVGQLSSLKQLVLYCNGLSGWLPSS 97
L P + L +L L LY N +S P S
Sbjct: 294 LEDISP--ISNLKNLTYLTLYFNNISDISPVS 323
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQLSSLKQLVLYC 87
+++L +L++ NQL + D LT LK L +N N+L+ S+P V +L+ LK L LY
Sbjct: 75 LTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQ 133
Query: 88 NGLSGWLPSSFGNLNNL 104
N L F L +L
Sbjct: 134 NQLKSVPDGVFDRLTSL 150
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 19/150 (12%)
Query: 14 ESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPRE 73
E+N+L ++ +++L L +G N+L + + LT L +L ++ N+L+ S+P
Sbjct: 36 ETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ-SLPNG 94
Query: 74 V-GQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQLS 132
V +L+ LK+L L N L F L L L L +NQL
Sbjct: 95 VFDKLTQLKELALNTNQLQSLPDGVFDKLTQLK-----------------DLRLYQNQLK 137
Query: 133 GSIPHFLGHLSNLAVLHLGDNSLFGSIPPI 162
L++L + L DN + P I
Sbjct: 138 SVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 167
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 19/154 (12%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS-------FLLYEY 544
VA+KK + P + + E++ L +RH NV+ F P ++ +L+ +
Sbjct: 53 VAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV-FTPDETLDDFTDFYLVMPF 111
Query: 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL 604
+G ++ D + ++ + L Y+H I+HRD+ N+ +
Sbjct: 112 MGTDLGKLMKHEKLGEDRIQF-----LVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNE 163
Query: 605 DYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
D + + DFG+++ + DS V T Y AP
Sbjct: 164 DCELKILDFGLAR--QADSEMXGXVV-TRWYRAP 194
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 444 KLFSILTFEGKILYEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPD 503
K+ +L +GK + I TN IG V++A+L + VA+KK
Sbjct: 23 KVIKVLASDGKTGEQREIAYTNC----KVIGNGSFGVVFQAKLVESDEVAIKK------- 71
Query: 504 MVVQQAFSN-EIKALTELRHRNVVKFYGFSF----HPRQSFL--LYEYLGRGSLAIILSN 556
++ + F N E++ + ++H NVV F + + FL + EY+ +
Sbjct: 72 VLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE----TVYRA 127
Query: 557 DAAIDEFSWTVRMNVIK----SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-HVS 611
+ T+ M +IK + +L+Y+H I HRDI +N+LL +
Sbjct: 128 SRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLI 184
Query: 612 DFGISKFLKPDSSNWSEFVGTFGYVAP 638
DFG +K L N S + Y AP
Sbjct: 185 DFGSAKILIAGEPNVSXICSRY-YRAP 210
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 16 NTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEI-DPLTHLKHLYINVNKLRGSVPREV 74
N + + P ++ L LD+ NNQL+ V+P + D LT L L +N N+L+ S+PR
Sbjct: 40 NRITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDNQLK-SIPR-- 95
Query: 75 GQLSSLKQL 83
G +L+ L
Sbjct: 96 GAFDNLRSL 104
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
+G+ SV A + S E VA+KK P + + E+ L ++H NV+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 532 SFHPRQSFL-LYE-YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
F P S Y+ YL + L + +FS ++ + L Y+H
Sbjct: 92 -FTPASSLRNFYDFYLVMPFMQTDLQKIMGL-KFSEEKIQYLVYQMLKGLKYIHS---AG 146
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+VHRD+ N+ + D + + DFG+++ + + +V T Y AP
Sbjct: 147 VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG---YVVTRWYRAP 192
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 125/313 (39%), Gaps = 77/313 (24%)
Query: 56 LKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPXXXXX 115
+K L ++ N++ ++ + +L+ LVL NG++ SF +L +L
Sbjct: 54 VKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLE---------- 103
Query: 116 XXXXXXFHLDLSENQLSGSIPHFLGHLSNLAVLHL--------GDNSLFGSIPPILGKVQ 167
HLDLS N LS + LS+L L+L G+ SLF L K+Q
Sbjct: 104 -------HLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSH----LTKLQ 152
Query: 168 XXXXXXXXXXXXXXVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQI 227
I + N++ ++ + + L L ELEID L
Sbjct: 153 -------------------ILRVGNMDT---FTKIQRKDFAGLTFLEELEIDASDLQSYE 190
Query: 228 PKSLRNFTSLN--IVHLEQNHLTGNIY-EVFGIYPNLTFLDLSQNNFY------GSLNFS 278
PKSL++ +++ I+H++Q+ L I+ +V L D + F+ G N
Sbjct: 191 PKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSL 250
Query: 279 MNNIT-RSIPPKIGKLYQLHKLDFSLNHIVGELPIELG-------------NLKSLNYRA 324
+ T R++ L+Q+ KL LN I G L +E L SL
Sbjct: 251 IKKFTFRNVKITDESLFQVMKL---LNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIW 307
Query: 325 LNGNKVYGSLPRV 337
L+ N S PR+
Sbjct: 308 LHTNPWDCSCPRI 320
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 6 FFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNK 65
F F V +LF ++ + IS L L+ NQL V D LT L+ ++++ N
Sbjct: 254 FTFRNVKITDESLFQVMK-LLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNP 312
Query: 66 LRGSVPR 72
S PR
Sbjct: 313 WDCSCPR 319
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 11/154 (7%)
Query: 490 EIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGS 549
+IV V KF S P + + E L+H ++V+ ++++E++
Sbjct: 55 KIVDVAKFTS-SPGLSTED-LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGAD 112
Query: 550 LA--IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607
L I+ DA +S V + ++ + L Y H + I+HRD+ +NVLL +
Sbjct: 113 LCFEIVKRADAGF-VYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKEN 168
Query: 608 A---HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ + DFG++ L VGT ++AP
Sbjct: 169 SAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAP 202
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSK 598
F + EYL G L + + + +F + + L ++H IV+RD+
Sbjct: 94 FFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLD 147
Query: 599 NVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
N+LL D ++DFG+ K + + F GT Y+AP
Sbjct: 148 NILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAP 187
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 35/169 (20%)
Query: 486 LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNV-----VKFYGFSFHPRQSFL 540
+PS +I+AVK+ + V + ++ R V V FYG F ++
Sbjct: 29 VPSGQIMAVKRIRA-----TVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83
Query: 541 LYEYLGRGSLAIILSNDAAIDEF-------SWTVRMNVIKSVA----NTLSYMHHDYFPP 589
E + D ++D+F T+ +++ +A L ++H
Sbjct: 84 CMELM-----------DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--S 130
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ NVL+ + DFGIS +L D + + G Y+AP
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AGCKPYMAP 178
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 15/140 (10%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E++H NV+ + + L+ E + G L L+ ++ E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + N + Y+H I H D+ +N++L LD + + DFG++
Sbjct: 116 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 166
Query: 620 KPDSSN-WSEFVGTFGYVAP 638
K D N + GT +VAP
Sbjct: 167 KIDFGNEFKNIFGTPAFVAP 186
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E++H NV+ + + L+ E + G L L+ ++ E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + N + Y+H I H D+ +N++L LD + + DFG++
Sbjct: 116 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 166
Query: 620 KPDSSNWSEFVGTFG---YVAP 638
K D N EF FG +VAP
Sbjct: 167 KIDFGN--EFKNIFGTPEFVAP 186
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 7/124 (5%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E+ A L +V YG + E L GSL ++ + E +
Sbjct: 133 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALY 189
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD-AHVSDFGISKFLKPDSSNWSEF 629
+ L Y+H I+H D+ + NVLL D A + DFG + L+PD S
Sbjct: 190 YLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLL 246
Query: 630 VGTF 633
G +
Sbjct: 247 TGDY 250
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E++H NV+ + + L+ E + G L L+ ++ E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + N + Y+H I H D+ +N++L LD + + DFG++
Sbjct: 116 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 166
Query: 620 KPDSSNWSEFVGTFG---YVAP 638
K D N EF FG +VAP
Sbjct: 167 KIDFGN--EFKNIFGTPEFVAP 186
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E++H NV+ + + L+ E + G L L+ ++ E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + N + Y+H I H D+ +N++L LD + + DFG++
Sbjct: 116 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 166
Query: 620 KPDSSNWSEFVGTFG---YVAP 638
K D N EF FG +VAP
Sbjct: 167 KIDFGN--EFKNIFGTPEFVAP 186
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQLSSLKQLVLYC 87
++NL +L++ +NQL + D LT+L L ++ N+L+ S+P V +L+ LK L LY
Sbjct: 132 LTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQ 190
Query: 88 NGLSGWLPSSFGNLNNL 104
N L F L +L
Sbjct: 191 NQLKSVPDGVFDRLTSL 207
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 57/133 (42%), Gaps = 20/133 (15%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQLSSLKQLVLYC 87
++NL +L + NQL + D LT+LK L + N+L+ S+P V +L++L L L
Sbjct: 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAH 142
Query: 88 NGLSGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQLSGSIPHFLGHLSNLAV 147
N L F L NL LDLS NQL L+ L
Sbjct: 143 NQLQSLPKGVFDKLTNLT-----------------ELDLSYNQLQSLPEGVFDKLTQLKD 185
Query: 148 LHLGDNSLFGSIP 160
L L N L S+P
Sbjct: 186 LRLYQNQL-KSVP 197
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQLSSLKQLVLY- 86
++NL LD+ NQL + D LT LK L + N+L+ SVP V +L+SL+ + L+
Sbjct: 156 LTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHD 214
Query: 87 ------CNG---LSGWLPSSFGNLNNLAIGSMP 110
C G LS W+ G + N A P
Sbjct: 215 NPWDCTCPGIRYLSEWINKHSGVVRNSAGSVAP 247
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 15 SNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV 74
++T+F +PP+I K LD+ +N++ IP+++ L L+ L + N+L+ SVP +
Sbjct: 412 TDTIFRCLPPRI------KVLDLHSNKIKS-IPKQVVKLEALQELNVASNQLK-SVPDGI 463
Query: 75 -GQLSSLKQLVLYCNGLSGWLP 95
+L+SL+++ L+ N P
Sbjct: 464 FDRLTSLQKIWLHTNPWDCSCP 485
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 22 IPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPR 72
IP Q+ + L+ L++ +NQL V D LT L+ ++++ N S PR
Sbjct: 436 IPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 27 GNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLR--GSVPREVGQLSSLKQLV 84
IS LD NN L+ + + LT L+ L + +N+L+ + Q+ SL+QL
Sbjct: 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380
Query: 85 LYCNGLS 91
+ N +S
Sbjct: 381 ISQNSVS 387
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E++H NV+ + + L+ E + G L L+ ++ E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + N + Y+H I H D+ +N++L LD + + DFG++
Sbjct: 116 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 166
Query: 620 KPDSSNWSEFVGTFG---YVAP 638
K D N EF FG +VAP
Sbjct: 167 KIDFGN--EFKNIFGTPEFVAP 186
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 77 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 136
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + Y+ F VHRD++++N +L + V+DFG+++
Sbjct: 137 FGL--QVAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E++H NV+ + + L+ E + G L L+ ++ E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + N + Y+H I H D+ +N++L LD + + DFG++
Sbjct: 116 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 166
Query: 620 KPDSSNWSEFVGTFG---YVAP 638
K D N EF FG +VAP
Sbjct: 167 KIDFGN--EFKNIFGTPEFVAP 186
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E++H NV+ + + L+ E + G L L+ ++ E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + N + Y+H I H D+ +N++L LD + + DFG++
Sbjct: 116 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 166
Query: 620 KPDSSNWSEFVGTFG---YVAP 638
K D N EF FG +VAP
Sbjct: 167 KIDFGN--EFKNIFGTPEFVAP 186
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 33/145 (22%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH------PR--------- 536
VAVK + + F +E + + H NV++ G P+
Sbjct: 65 VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124
Query: 537 ----QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVH 592
++LLY L G I L + + +A + Y+ + F +H
Sbjct: 125 YGDLHTYLLYSRLETGPKHIPLQT-----------LLKFMVDIALGMEYLSNRNF---LH 170
Query: 593 RDISSKNVLLGLDYDAHVSDFGISK 617
RD++++N +L D V+DFG+SK
Sbjct: 171 RDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 97 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 156
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + Y+ F VHRD++++N +L + V+DFG+++
Sbjct: 157 FGL--QVAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E++H NV+ + + L+ E + G L L+ ++ E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + N + Y+H I H D+ +N++L LD + + DFG++
Sbjct: 116 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 166
Query: 620 KPDSSNWSEFVGTFG---YVAP 638
K D N EF FG +VAP
Sbjct: 167 KIDFGN--EFKNIFGTPEFVAP 186
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E++H NV+ + + L+ E + G L L+ ++ E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + N + Y+H I H D+ +N++L LD + + DFG++
Sbjct: 116 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 166
Query: 620 KPDSSNWSEFVGTFG---YVAP 638
K D N EF FG +VAP
Sbjct: 167 KIDFGN--EFKNIFGTPEFVAP 186
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 96 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 155
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + Y+ F VHRD++++N +L + V+DFG+++
Sbjct: 156 FGL--QVAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E++H NV+ + + L+ E + G L L+ ++ E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + N + Y+H I H D+ +N++L LD + + DFG++
Sbjct: 116 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 166
Query: 620 KPDSSNWSEFVGTFG---YVAP 638
K D N EF FG +VAP
Sbjct: 167 KIDFGN--EFKNIFGTPEFVAP 186
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E++H NV+ + + L+ E + G L L+ ++ E
Sbjct: 55 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 114
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + N + Y+H I H D+ +N++L LD + + DFG++
Sbjct: 115 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 165
Query: 620 KPDSSNWSEFVGTFG---YVAP 638
K D N EF FG +VAP
Sbjct: 166 KIDFGN--EFKNIFGTPEFVAP 185
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 70 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 129
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + Y+ F VHRD++++N +L + V+DFG+++
Sbjct: 130 FGL--QVAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E++H NV+ + + L+ E + G L L+ ++ E
Sbjct: 55 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 114
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + N + Y+H I H D+ +N++L LD + + DFG++
Sbjct: 115 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 165
Query: 620 KPDSSNWSEFVGTFG---YVAP 638
K D N EF FG +VAP
Sbjct: 166 KIDFGN--EFKNIFGTPEFVAP 185
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E++H NV+ + + L+ E + G L L+ ++ E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + N + Y+H I H D+ +N++L LD + + DFG++
Sbjct: 116 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 166
Query: 620 KPDSSNWSEFVGTFG---YVAP 638
K D N EF FG +VAP
Sbjct: 167 KIDFGN--EFKNIFGTPEFVAP 186
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 23/165 (13%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELR-HRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
VAVK+ D+ + EIK LTE H NV+++Y R ++ E
Sbjct: 42 VAVKRMLIDFCDIALM-----EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQ 96
Query: 551 AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG----LDY 606
++ S + + + N I + S + H + I+HRD+ +N+L+
Sbjct: 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTA 156
Query: 607 DAH---------VSDFGISKFLKPDSS----NWSEFVGTFGYVAP 638
D +SDFG+ K L S N + GT G+ AP
Sbjct: 157 DQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAP 201
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 22/176 (12%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQ-QAFSN-EIKALTELRHRNVVKFY 529
IG VY+A+L S E+VA+KK V+Q +AF N E++ + +L H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQGKAFKNRELQIMRKLDHCNIVRLR 79
Query: 530 GFSFHPRQSF------LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
F + + L+ +Y+ + A + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S ++ + Y AP
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-YICSRYYRAP 191
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + Y+ F VHRD++++N +L + V+DFG+++
Sbjct: 138 FGL--QVAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 24/150 (16%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
VAVK P + ++A +E+K L+ L H N+V G + ++ EY G L
Sbjct: 79 VAVKML-KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 137
Query: 551 AIILSNDAAIDEFSWTVRMNVIK-----------------SVANTLSYMHHDYFPPIVHR 593
L D F + I VA ++++ +HR
Sbjct: 138 LNFLRRKR--DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHR 192
Query: 594 DISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
D++++N+LL + DFG+++ +K DS
Sbjct: 193 DLAARNILLTHGRITKICDFGLARHIKNDS 222
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A +SY+ +VHRD++++NVL+ ++DFG+++ L D + +
Sbjct: 122 LNWCMQIAKGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEY 176
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 75 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 134
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + Y+ F VHRD++++N +L + V+DFG+++
Sbjct: 135 FGL--QVAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 20/125 (16%)
Query: 506 VQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL-----SNDAAI 560
+++ F +E L+H NVV G + +++ Y G L L +D
Sbjct: 72 LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGS 131
Query: 561 DEFSWTVR--------MNVIKSVANTLSYM--HHDYFPPIVHRDISSKNVLLGLDYDAHV 610
+ TV+ ++++ +A + Y+ HH +VH+D++++NVL+ + +
Sbjct: 132 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKI 186
Query: 611 SDFGI 615
SD G+
Sbjct: 187 SDLGL 191
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 20/157 (12%)
Query: 488 SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGR 547
S E+VAVK + + EI LRH N+V+F P ++ EY
Sbjct: 43 SNELVAVKYIERGEK---IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASG 99
Query: 548 GSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607
G L + N FS + + + +SY H + HRD+ +N LL
Sbjct: 100 GELFERICNAG---RFSEDEARFFFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPA 153
Query: 608 AH--VSDFGISK----FLKPDSSNWSEFVGTFGYVAP 638
+ FG SK +P S+ VGT Y+AP
Sbjct: 154 PRLKICAFGYSKSSVLHSQPKST-----VGTPAYIAP 185
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 76 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 135
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + Y+ F VHRD++++N +L + V+DFG+++
Sbjct: 136 FGL--QVAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + Y+ F VHRD++++N +L + V+DFG+++
Sbjct: 138 FGL--QVAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 77 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 136
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + Y+ F VHRD++++N +L + V+DFG+++
Sbjct: 137 FGL--QVAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 22/176 (12%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQ-QAFSN-EIKALTELRHRNVVKFY 529
IG VY+A+L S E+VA+KK V+Q +AF N E++ + +L H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQGKAFKNRELQIMRKLDHCNIVRLR 79
Query: 530 GFSFHPRQSF------LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
F + + L+ +Y+ + A + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S ++ + Y AP
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-YICSRYYRAP 191
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 539 FLLYEYLGRGSL-AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISS 597
L+ EY G + ++ L A + + +R+ IK + + Y+H + IVH D+
Sbjct: 105 ILILEYAAGGEIFSLCLPELAEMVSENDVIRL--IKQILEGVYYLHQN---NIVHLDLKP 159
Query: 598 KNVLLGLDY---DAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+N+LL Y D + DFG+S+ + + E +GT Y+AP
Sbjct: 160 QNILLSSIYPLGDIKIVDFGMSRKIG-HACELREIMGTPEYLAP 202
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 73 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 132
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + Y+ F VHRD++++N +L + V+DFG+++
Sbjct: 133 FGL--QVAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 20/125 (16%)
Query: 506 VQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL-----SNDAAI 560
+++ F +E L+H NVV G + +++ Y G L L +D
Sbjct: 55 LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGS 114
Query: 561 DEFSWTVR--------MNVIKSVANTLSYM--HHDYFPPIVHRDISSKNVLLGLDYDAHV 610
+ TV+ ++++ +A + Y+ HH +VH+D++++NVL+ + +
Sbjct: 115 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKI 169
Query: 611 SDFGI 615
SD G+
Sbjct: 170 SDLGL 174
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 465 NNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR 523
+ ++ ++ IGT V +A + +VA+KK D++ + EI L L H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 524 NVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNV------IKSVA- 576
+VVK P+ E L ++L + A +F R V IK++
Sbjct: 113 HVVKVLDIVI-PKDVEKFDE------LYVVL--EIADSDFKKLFRTPVYLTELHIKTLLY 163
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK-PDSSN 625
N L + + + I+HRD+ N L+ D V DFG+++ + P++ N
Sbjct: 164 NLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGN 213
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 154 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 208
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 24/150 (16%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
VAVK P + ++A +E+K L+ L H N+V G + ++ EY G L
Sbjct: 72 VAVKML-KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 130
Query: 551 AIILSNDAAIDEFSWTVRMNVIK-----------------SVANTLSYMHHDYFPPIVHR 593
L D F + I VA ++++ +HR
Sbjct: 131 LNFLRRKR--DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHR 185
Query: 594 DISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
D++++N+LL + DFG+++ +K DS
Sbjct: 186 DLAARNILLTHGRITKICDFGLARDIKNDS 215
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 18 LFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQ 76
+FA++ + ++L+ L + N+++ + LTHLK L ++ N+L+ SVP + +
Sbjct: 287 IFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLKELALDTNQLK-SVPDGIFDR 345
Query: 77 LSSLKQLVLYCN 88
L+SL+++ L+ N
Sbjct: 346 LTSLQKIWLHTN 357
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 22/176 (12%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQ-QAFSN-EIKALTELRHRNVVKFY 529
IG VY+A+L S E+VA+KK V+Q +AF N E++ + +L H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK--------VLQGKAFKNRELQIMRKLDHCNIVRLR 79
Query: 530 GFSFHPRQSF------LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH 583
F + + L+ +Y+ + A + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 584 HDYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S + Y AP
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAP 191
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIIL-SNDAAIDEFSWTVRMN--------- 570
+H+N++ G +++ EY +G+L L + + E+S+ N
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 571 ---VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
VA + Y+ +HRD++++NVL+ D ++DFG+++
Sbjct: 152 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
IV+RD+ +N+LL +SD G++ + P+ VGT GY+AP
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVGYMAP 354
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 24/150 (16%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
VAVK P + ++A +E+K L+ L H N+V G + ++ EY G L
Sbjct: 56 VAVKML-KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 114
Query: 551 AIILSNDAAIDEFSWTVRMNVIK-----------------SVANTLSYMHHDYFPPIVHR 593
L D F + I VA ++++ +HR
Sbjct: 115 LNFLRRKR--DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHR 169
Query: 594 DISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
D++++N+LL + DFG+++ +K DS
Sbjct: 170 DLAARNILLTHGRITKICDFGLARDIKNDS 199
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 505 VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFS 564
V ++ E+ L E++H NV+ + + L+ E + G L L+ ++ E
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEE 115
Query: 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA-----HVSDFGISKFL 619
T +K + N + Y+H I H D+ +N++L LD + + DFG++
Sbjct: 116 AT---EFLKQILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAH-- 166
Query: 620 KPDSSNWSEFVGTFG---YVAP 638
K D N EF FG +VAP
Sbjct: 167 KIDFGN--EFKNIFGTPEFVAP 186
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAID-EFSWTVRMN--------- 570
+H+N++ G +++ EY +G+L L EFS+ N
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 571 ---VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
VA + Y+ +HRD++++NVL+ D ++DFG+++
Sbjct: 152 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 120 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 127 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 60/153 (39%), Gaps = 12/153 (7%)
Query: 488 SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGR 547
S E+VAVK + + EI LRH N+V+F P ++ EY
Sbjct: 43 SNELVAVKYIERGEK---IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASG 99
Query: 548 GSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607
G L + N FS + + + +SY H + HRD+ +N LL
Sbjct: 100 GELFERICNAG---RFSEDEARFFFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPA 153
Query: 608 AH--VSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ FG SK S + VGT Y+AP
Sbjct: 154 PRLKICAFGYSKS-SVLHSQPKDTVGTPAYIAP 185
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
IV+RD+ +N+LL +SD G++ + P+ VGT GY+AP
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVGYMAP 354
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 123 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 24/150 (16%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
VAVK P + ++A +E+K L+ L H N+V G + ++ EY G L
Sbjct: 74 VAVKML-KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 132
Query: 551 AIILSNDAAIDEFSWTVRMNVIK-----------------SVANTLSYMHHDYFPPIVHR 593
L D F + I VA ++++ +HR
Sbjct: 133 LNFLRRKR--DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHR 187
Query: 594 DISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
D++++N+LL + DFG+++ +K DS
Sbjct: 188 DLAARNILLTHGRITKICDFGLARDIKNDS 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 130 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 184
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 7/113 (6%)
Query: 511 SNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
+ E+ A L +V YG + E L GSL ++ + E +
Sbjct: 114 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALY 170
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD-AHVSDFGISKFLKPD 622
+ L Y+H I+H D+ + NVLL D A + DFG + L+PD
Sbjct: 171 YLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPD 220
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 24/150 (16%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
VAVK P + ++A +E+K L+ L H N+V G + ++ EY G L
Sbjct: 79 VAVKML-KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 137
Query: 551 AIILSNDAAIDEFSWTVRMNVIK-----------------SVANTLSYMHHDYFPPIVHR 593
L D F + I VA ++++ +HR
Sbjct: 138 LNFLRRKR--DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHR 192
Query: 594 DISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
D++++N+LL + DFG+++ +K DS
Sbjct: 193 DLAARNILLTHGRITKICDFGLARDIKNDS 222
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 120 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 122 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 127 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 120 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 123 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 127 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 122 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 123 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 120 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 123 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 120 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAID-EFSWTVRMN--------- 570
+H+N++ G +++ EY +G+L L E+S+ N
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 571 ---VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
VA + Y+ +HRD++++NVL+ D ++DFG+++
Sbjct: 193 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 124 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 178
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 579 LSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL--KPDSSNW--SEFVGTFG 634
L YMH ++HRD+ N+L+ + + + DFG+++ L P + +E+V T
Sbjct: 172 LKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 635 YVAP 638
Y AP
Sbjct: 229 YRAP 232
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 121 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKF-LKPDSSNWSEFVGT 632
++ L+Y+H I++RD+ NVLL + ++D+G+ K L+P + S F GT
Sbjct: 129 EISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGT 184
Query: 633 FGYVAP 638
Y+AP
Sbjct: 185 PNYIAP 190
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 579 LSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL--KPDSSNW--SEFVGTFG 634
L YMH ++HRD+ N+L+ + + + DFG+++ L P + +E+V T
Sbjct: 171 LKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 635 YVAP 638
Y AP
Sbjct: 228 YRAP 231
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 121 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 117 LNWCVQIAEGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 171
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 145 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 199
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 126 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 180
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKF-LKPDSSNWSEFVGT 632
++ L+Y+H I++RD+ NVLL + ++D+G+ K L+P + S F GT
Sbjct: 161 EISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-STFCGT 216
Query: 633 FGYVAP 638
Y+AP
Sbjct: 217 PNYIAP 222
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG++K L + +
Sbjct: 114 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 168
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 23 PPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPR 72
P ++S+L+ L+M +NQL V D LT L+ ++++ N S PR
Sbjct: 487 PTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 22 IPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQLSSL 80
+P + NL FLD+ QL + P + L+ L+ L + N+L+ SVP + +L+SL
Sbjct: 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK-SVPDGIFDRLTSL 520
Query: 81 KQLVLYCNGLSGWLP 95
+++ L+ N P
Sbjct: 521 QKIWLHTNPWDCSCP 535
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVKFYG 530
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 84
Query: 531 FSFHPRQSF------LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
F + + L+ +Y+ + A + + +L+Y+H
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 144
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S + Y AP
Sbjct: 145 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAP 195
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVKFYG 530
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 531 FSFHPRQSF------LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
F + + L+ +Y+ + A + + +L+Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S + Y AP
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAP 191
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 579 LSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
L +MH+ + +V+RD+ N+LL +SD G++ + S VGT GY+AP
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAP 359
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 579 LSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
L +MH+ + +V+RD+ N+LL +SD G++ + S VGT GY+AP
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAP 359
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSK 598
F + EY+ G L + + E ++ L+Y+H I++RD+
Sbjct: 86 FFVIEYVNGGDLMFHMQRQRKLPEEHARF---YSAEISLALNYLHER---GIIYRDLKLD 139
Query: 599 NVLLGLDYDAHVSDFGISKF-LKPDSSNWSEFVGTFGYVAP 638
NVLL + ++D+G+ K L+P + S F GT Y+AP
Sbjct: 140 NVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAP 179
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 579 LSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
L +MH+ + +V+RD+ N+LL +SD G++ + S VGT GY+AP
Sbjct: 304 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAP 358
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVKFYG 530
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 81
Query: 531 FSFHPRQSF------LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
F + + L+ +Y+ + A + + +L+Y+H
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 141
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S + Y AP
Sbjct: 142 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAP 192
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 579 LSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
L +MH+ + +V+RD+ N+LL +SD G++ + S VGT GY+AP
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAP 359
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKF-LKPDSSNWSEFVGT 632
++ L+Y+H I++RD+ NVLL + ++D+G+ K L+P + S F GT
Sbjct: 114 EISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGT 169
Query: 633 FGYVAP 638
Y+AP
Sbjct: 170 PNYIAP 175
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVKFYG 530
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 531 FSFHPRQSF------LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
F + + L+ +Y+ + A + + +L+Y+H
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S + Y AP
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAP 191
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAID-EFSWTVRMN--------- 570
+H+N++ G +++ EY +G+L L E+S+ N
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 571 ---VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
VA + Y+ +HRD++++NVL+ D ++DFG+++
Sbjct: 141 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 137 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 196
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + ++ F VHRD++++N +L + V+DFG+++
Sbjct: 197 FGL--QVAKGMKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVKFYG 530
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 531 FSFHPRQSF------LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
F + + L+ +Y+ + A + + +L+Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S + Y AP
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAP 191
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 22/144 (15%)
Query: 28 NISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPRE--VGQLSSLKQLVL 85
N+ NL+ LD+G++++ + P L HL L + L +V ++ L +L +L L
Sbjct: 71 NLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDL 130
Query: 86 YCNGL-SGWLPSSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQLSGSIPHFLGHLS- 143
N + S +L SFG LN+L +D S NQ+ H L L
Sbjct: 131 SKNQIRSLYLHPSFGKLNSLK-----------------SIDFSSNQIFLVCEHELEPLQG 173
Query: 144 -NLAVLHLGDNSLFGSIPPILGKV 166
L+ L NSL+ + GK
Sbjct: 174 KTLSFFSLAANSLYSRVSVDWGKC 197
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 18/100 (18%)
Query: 261 LTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHI--VGELPIELGNLK 318
LT LDLS+N + + P GKL L +DFS N I V E +E K
Sbjct: 125 LTRLDLSKNQIR----------SLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGK 174
Query: 319 SLNYRALNGNKVYGSLPRVLGSISD------LEYLDLSTN 352
+L++ +L N +Y + G + LE LD+S N
Sbjct: 175 TLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGN 214
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 24 PQIGNISNLKFLDMGNNQLSGVIPQEIDPL--THLKHLYINVNKLRGSVPREVGQ-LSSL 80
P G +++LK +D +NQ+ V E++PL L + N L V + G+ ++
Sbjct: 142 PSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPF 201
Query: 81 KQLVLYCNGLS--GWLPSSFGNLNN 103
+ +VL +S GW GN +N
Sbjct: 202 RNMVLEILDVSGNGWTVDITGNFSN 226
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAID-EFSWTVRMN--------- 570
+H+N++ G +++ EY +G+L L E+S+ N
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 571 ---VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
VA + Y+ +HRD++++NVL+ D ++DFG+++
Sbjct: 152 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAID-EFSWTVRMN--------- 570
+H+N++ G +++ EY +G+L L E+S+ N
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 571 ---VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
VA + Y+ +HRD++++NVL+ D ++DFG+++
Sbjct: 144 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAID-EFSWTVRMN--------- 570
+H+N++ G +++ EY +G+L L E+S+ N
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 571 ---VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
VA + Y+ +HRD++++NVL+ D ++DFG+++
Sbjct: 145 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVKFYG 530
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 531 FSFHPRQSF------LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
F + + L+ +Y+ + A + + +L+Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S ++ + Y AP
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-YICSRYYRAP 191
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 79 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 138
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + ++ F VHRD++++N +L + V+DFG+++
Sbjct: 139 FGL--QVAKGMKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVK--- 527
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 88
Query: 528 -FYGFSFHPRQSFL--LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
FY + +L + +Y+ + A + + +L+Y+H
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 148
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S + Y AP
Sbjct: 149 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAP 199
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILS-------------NDAAIDEFSWTV 567
+H+N++ G +++ EY +G+L L N ++ ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++ +A + Y+ +HRD++++NVL+ + ++DFG+++
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVK--- 527
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 99
Query: 528 -FYGFSFHPRQSFL--LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
FY + +L + +Y+ + A + + +L+Y+H
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 159
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S + Y AP
Sbjct: 160 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAP 210
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILS-------------NDAAIDEFSWTV 567
+H+N++ G +++ EY +G+L L N ++ ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++ +A + Y+ +HRD++++NVL+ + ++DFG+++
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILS-------------NDAAIDEFSWTV 567
+H+N++ G +++ EY +G+L L N ++ ++
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++ +A + Y+ +HRD++++NVL+ + ++DFG+++
Sbjct: 146 LVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I++RD+ NV+L + ++DFG+ K D F GT Y+AP
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAP 190
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 7/123 (5%)
Query: 512 NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNV 571
E+ A L +V YG + E L GSL ++ + E +
Sbjct: 113 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYY 169
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD-YDAHVSDFGISKFLKPDSSNWSEFV 630
+ L Y+H I+H D+ + NVLL D A + DFG + L+PD S
Sbjct: 170 LGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 226
Query: 631 GTF 633
G +
Sbjct: 227 GDY 229
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + ++ F VHRD++++N +L + V+DFG+++
Sbjct: 138 FGL--QVAKGMKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 19/107 (17%)
Query: 15 SNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV 74
+ ++F +PP++ K LD+ NN++ IP+++ L L+ L + N+L+ SVP V
Sbjct: 441 TGSVFRCLPPKV------KVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLK-SVPDGV 492
Query: 75 -GQLSSLKQLVLY-------CNG---LSGWLPSSFGNLNNLAIGSMP 110
+L+SL+ + L+ C G LS W+ G + N A P
Sbjct: 493 FDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINKHSGVVRNSAGSVAP 539
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 14/168 (8%)
Query: 182 VLPPSISNLSNL---EGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLN 238
V PPS S+ + L + ++ S LQ + L+ + + F ++ +N +SL
Sbjct: 347 VCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLE 406
Query: 239 IVHLEQNHLTGNIYEVFGIYP-NLTFLDLSQNNFYGSLNFSM----------NNITRSIP 287
+ + N L + Y+ + ++ L+LS N GS+ + NN SIP
Sbjct: 407 TLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIP 466
Query: 288 PKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLP 335
+ L L +L+ + N + L SL Y L+ N + P
Sbjct: 467 KDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVK--- 527
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 528 -FYGFSFHPRQSFL--LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
FY + +L + +Y+ + A + + +L+Y+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S + Y AP
Sbjct: 153 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAP 203
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 83 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 142
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + ++ F VHRD++++N +L + V+DFG+++
Sbjct: 143 FGL--QVAKGMKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILS-------------NDAAIDEFSWTV 567
+H+N++ G +++ EY +G+L L N ++ ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++ +A + Y+ +HRD++++NVL+ + ++DFG+++
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILS-------------NDAAIDEFSWTV 567
+H+N++ G +++ EY +G+L L N ++ ++
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++ +A + Y+ +HRD++++NVL+ + ++DFG+++
Sbjct: 205 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 79 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 138
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + ++ F VHRD++++N +L + V+DFG+++
Sbjct: 139 FGL--QVAKGMKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILS-------------NDAAIDEFSWTV 567
+H+N++ G +++ EY +G+L L N ++ ++
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++ +A + Y+ +HRD++++NVL+ + ++DFG+++
Sbjct: 148 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + ++ F VHRD++++N +L + V+DFG+++
Sbjct: 138 FGL--QVAKGMKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 7/123 (5%)
Query: 512 NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNV 571
E+ A L +V YG + E L GSL ++ + E +
Sbjct: 115 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYY 171
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD-YDAHVSDFGISKFLKPDSSNWSEFV 630
+ L Y+H I+H D+ + NVLL D A + DFG + L+PD S
Sbjct: 172 LGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 228
Query: 631 GTF 633
G +
Sbjct: 229 GDY 231
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAI-------------DEFSWTV 567
+H+N++ G +++ EY +G+L L ++ S
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++ VA + Y+ +HRD++++NVL+ D ++DFG+++
Sbjct: 137 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILS-------------NDAAIDEFSWTV 567
+H+N++ G +++ EY +G+L L N ++ ++
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++ +A + Y+ +HRD++++NVL+ + ++DFG+++
Sbjct: 151 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVK--- 527
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 528 -FYGFSFHPRQSFL--LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
FY + +L + +Y+ + A + + +L+Y+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S + Y AP
Sbjct: 153 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAP 203
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 66/165 (40%), Gaps = 23/165 (13%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELR-HRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
VAVK+ D+ + EIK LTE H NV+++Y R ++ E
Sbjct: 42 VAVKRMLIDFCDIALM-----EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQ 96
Query: 551 AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG----LDY 606
++ S + + + N I + S + H + I+HRD+ +N+L+
Sbjct: 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTA 156
Query: 607 DAH---------VSDFGISKFLKPDS----SNWSEFVGTFGYVAP 638
D +SDFG+ K L N + GT G+ AP
Sbjct: 157 DQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAP 201
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 510 FSNEIKALTELRHRNVVKFYGFSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVR 568
F E + + H NV+ G S ++ Y+ G L + N+ +
Sbjct: 76 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 135
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ VA + ++ F VHRD++++N +L + V+DFG+++
Sbjct: 136 FGL--QVAKGMKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILS-------------NDAAIDEFSWTV 567
+H+N++ G +++ EY +G+L L N ++ ++
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++ +A + Y+ +HRD++++NVL+ + ++DFG+++
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAI-------------DEFSWTV 567
+H+N++ G +++ EY +G+L L ++ S
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++ VA + Y+ +HRD++++NVL+ D ++DFG+++
Sbjct: 152 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 7/123 (5%)
Query: 512 NEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNV 571
E+ A L +V YG + E L GSL ++ + E +
Sbjct: 99 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYY 155
Query: 572 IKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD-AHVSDFGISKFLKPDSSNWSEFV 630
+ L Y+H I+H D+ + NVLL D A + DFG + L+PD S
Sbjct: 156 LGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212
Query: 631 GTF 633
G +
Sbjct: 213 GDY 215
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I++RD+ NV+L + ++DFG+ K D F GT Y+AP
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAP 511
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILS-------------NDAAIDEFSWTV 567
+H+N++ G +++ EY +G+L L N ++ ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++ +A + Y+ +HRD++++NVL+ + ++DFG+++
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILS-------------NDAAIDEFSWTV 567
+H+N++ G +++ EY +G+L L N ++ ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++ +A + Y+ +HRD++++NVL+ + ++DFG+++
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 570 NVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD--YDAHVSDFGISK-FLKPDSSNW 626
N+++ + + L Y+H+ I HRDI +N L + ++ + DFG+SK F K ++ +
Sbjct: 172 NIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY 228
Query: 627 ---SEFVGTFGYVAP 638
+ GT +VAP
Sbjct: 229 YGMTTKAGTPYFVAP 243
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 574 SVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTF 633
++ L Y+ + ++HRD+ N+LL + DFGIS L D + G
Sbjct: 132 AIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK-DRSAGCA 188
Query: 634 GYVAP 638
Y+AP
Sbjct: 189 AYMAP 193
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 182
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K + W+ GT Y+AP
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GATWT-LCGTPEYLAP 228
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 66/165 (40%), Gaps = 23/165 (13%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELR-HRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
VAVK+ D+ + EIK LTE H NV+++Y R ++ E
Sbjct: 60 VAVKRMLIDFCDIALM-----EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQ 114
Query: 551 AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG----LDY 606
++ S + + + N I + S + H + I+HRD+ +N+L+
Sbjct: 115 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTA 174
Query: 607 DAH---------VSDFGISKFLKPDS----SNWSEFVGTFGYVAP 638
D +SDFG+ K L N + GT G+ AP
Sbjct: 175 DQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAP 219
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVK--- 527
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 93
Query: 528 -FYGFSFHPRQSFL--LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
FY + +L + +Y+ + A + + +L+Y+H
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 153
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S ++ + Y AP
Sbjct: 154 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-YICSRYYRAP 204
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 66/165 (40%), Gaps = 23/165 (13%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELR-HRNVVKFYGFSFHPRQSFLLYEYLGRGSL 550
VAVK+ D+ + EIK LTE H NV+++Y R ++ E
Sbjct: 60 VAVKRMLIDFCDIALM-----EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQ 114
Query: 551 AIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG----LDY 606
++ S + + + N I + S + H + I+HRD+ +N+L+
Sbjct: 115 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTA 174
Query: 607 DAH---------VSDFGISKFLKPDS----SNWSEFVGTFGYVAP 638
D +SDFG+ K L N + GT G+ AP
Sbjct: 175 DQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAP 219
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILS-------------NDAAIDEFSWTV 567
+H+N++ G +++ EY +G+L L N ++ ++
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++ +A + Y+ +HRD++++NVL+ + ++DFG+++
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG +K L + +
Sbjct: 127 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 181
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG +K L + +
Sbjct: 122 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG +K L + +
Sbjct: 122 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 14/115 (12%)
Query: 512 NEIKALTELR-HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
E++ L + + HRNV++ F + +L++E + GS+ + +E +V
Sbjct: 59 REVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV--- 115
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVS-----DFGISKFLK 620
V++ VA+ L ++H+ I HRD+ +N+L ++ VS DFG+ +K
Sbjct: 116 VVQDVASALDFLHNK---GIAHRDLKPENIL--CEHPNQVSPVKICDFGLGSGIK 165
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG +K L + +
Sbjct: 120 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 174
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG +K L + +
Sbjct: 122 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVK--- 527
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 85
Query: 528 -FYGFSFHPRQSFL--LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
FY + +L + +Y+ + A + + +L+Y+H
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 145
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S ++ + Y AP
Sbjct: 146 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-YICSRYYRAP 196
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 569 MNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNW 626
+N +A ++Y+ +VHRD++++NVL+ ++DFG +K L + +
Sbjct: 124 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 178
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVK--- 527
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 528 -FYGFSFHPRQSFL--LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
FY + +L + +Y+ + A + + +L+Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S + Y AP
Sbjct: 175 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAP 225
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 512 NEIKALTELR-HRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMN 570
E++ L + + HRNV++ F + +L++E + GS+ + +E +V
Sbjct: 59 REVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV--- 115
Query: 571 VIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKF 618
V++ VA+ L ++H+ I HRD+ +N+L ++ VS I F
Sbjct: 116 VVQDVASALDFLHNK---GIAHRDLKPENIL--CEHPNQVSPVKICDF 158
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS-SNWSEFVGTFGYVAP 638
HRD+ +N+L+ D A++ DFGI+ + + VGT Y AP
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAP 204
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 591 VHRDISSKNVLLGLDYDAHVSDFGIS-KFLKPDSSNWSEFVGTFGYVAP 638
VHRDI N+L+ ++ ++DFG K ++ + S VGT Y++P
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISP 245
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Query: 235 TSLNIVHLEQNHLTGN-IYEVFGIYPNLTFLDLSQNNF----YGS---------LNFSMN 280
TSLN + + N N + VF NLTFLDLS+ +G LN S N
Sbjct: 448 TSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHN 507
Query: 281 NITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKV 330
N+ +LY L LD S N I I KSL + L N V
Sbjct: 508 NLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSV 557
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Query: 235 TSLNIVHLEQNHLTGN-IYEVFGIYPNLTFLDLSQNNF----YGS---------LNFSMN 280
TSLN + + N N + VF NLTFLDLS+ +G LN S N
Sbjct: 443 TSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHN 502
Query: 281 NITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKV 330
N+ +LY L LD S N I I KSL + L N V
Sbjct: 503 NLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSV 552
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 19/148 (12%)
Query: 506 VQQAFSNEIKALTELRHRNVVKFYG--FSFHPRQSFLLYEYLGRGSLAIILSNDAA-IDE 562
+ + EI L EL+H NV+ S R+ +LL++Y II + A+ ++
Sbjct: 61 ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANK 120
Query: 563 FSWTVRMNVIKS----VANTLSYMHHDYFPPIVHRDISSKNVLL---GLDY-DAHVSDFG 614
+ ++KS + + + Y+H ++ ++HRD+ N+L+ G + ++D G
Sbjct: 121 KPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMG 177
Query: 615 ISKF----LKPDSSNWSEFVGTFGYVAP 638
++ LKP ++ V TF Y AP
Sbjct: 178 FARLFNSPLKP-LADLDPVVVTFWYRAP 204
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 473 IGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFY-- 529
+G G V+ A + + VA+KK P V+ A EIK + L H N+VK +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQ-SVKHAL-REIKIIRRLDHDNIVKVFEI 76
Query: 530 ------------GFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVAN 577
G +++ EY+ LA +L ++E + +++
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGPLLEEHARLFMYQLLRG--- 132
Query: 578 TLSYMHHDYFPPIVHRDISSKNVLLGL-DYDAHVSDFGISKFLKPDSS---NWSEFVGTF 633
L Y+H ++HRD+ N+ + D + DFG+++ + P S + SE + T
Sbjct: 133 -LKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 634 GYVAP 638
Y +P
Sbjct: 189 WYRSP 193
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVK--- 527
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 159
Query: 528 -FYGFSFHPRQSFL--LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
FY + +L + +Y+ + A + + +L+Y+H
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 219
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S ++ + Y AP
Sbjct: 220 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-YICSRYYRAP 270
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVK--- 527
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 108
Query: 528 -FYGFSFHPRQSFL--LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
FY + +L + +Y+ + A + + +L+Y+H
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 168
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S ++ + Y AP
Sbjct: 169 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-YICSRYYRAP 219
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
Query: 462 RATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL 520
R T F IG+ SV+K + I A+K+ P V +Q E+ A L
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 521 -RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM-NVIKSVANT 578
+H +VV+++ + EY GSLA +S + I + + +++ V
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 579 LSYMHHDYFPPIVHRDISSKNVLL 602
L Y+H +VH DI N+ +
Sbjct: 128 LRYIHS---MSLVHMDIKPSNIFI 148
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 65/169 (38%), Gaps = 35/169 (20%)
Query: 486 LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNV-----VKFYGFSFHPRQSFL 540
+PS +I AVK+ + V + ++ R V V FYG F ++
Sbjct: 56 VPSGQIXAVKRIRA-----TVNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWI 110
Query: 541 LYEYLGRGSLAIILSNDAAIDEF-------SWTVRMNVIKSVA----NTLSYMHHDYFPP 589
E D ++D+F T+ +++ +A L ++H
Sbjct: 111 CXEL-----------XDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--S 157
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
++HRD+ NVL+ DFGIS +L D + + G Y AP
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID-AGCKPYXAP 205
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
Query: 462 RATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL 520
R T F IG+ SV+K + I A+K+ P V +Q E+ A L
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 521 -RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM-NVIKSVANT 578
+H +VV+++ + EY GSLA +S + I + + +++ V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 579 LSYMHHDYFPPIVHRDISSKNVLL 602
L Y+H +VH DI N+ +
Sbjct: 126 LRYIHS---MSLVHMDIKPSNIFI 146
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVK--- 527
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 118
Query: 528 -FYGFSFHPRQSFL--LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
FY + +L + +Y+ + A + + +L+Y+H
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 178
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S ++ + Y AP
Sbjct: 179 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-YICSRYYRAP 229
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVK--- 527
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 528 -FYGFSFHPRQSFL--LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
FY + +L + +Y+ + A + + +L+Y+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S ++ + Y AP
Sbjct: 175 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-YICSRYYRAP 225
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 20/175 (11%)
Query: 473 IGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSN-EIKALTELRHRNVVK--- 527
IG VY+A+L S E+VA+KK ++ + F N E++ + +L H N+V+
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKK-------VLQDKRFKNRELQIMRKLDHCNIVRLRY 116
Query: 528 -FYGFSFHPRQSFL--LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH 584
FY + +L + +Y+ + A + + +L+Y+H
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 176
Query: 585 DYFPPIVHRDISSKNVLLGLDYDA-HVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I HRDI +N+LL D + DFG +K L N S ++ + Y AP
Sbjct: 177 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-YICSRYYRAP 227
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
Query: 462 RATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL 520
R T F IG+ SV+K + I A+K+ P V +Q E+ A L
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 521 -RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM-NVIKSVANT 578
+H +VV+++ + EY GSLA +S + I + + +++ V
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 579 LSYMHHDYFPPIVHRDISSKNVLL 602
L Y+H +VH DI N+ +
Sbjct: 124 LRYIHS---MSLVHMDIKPSNIFI 144
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
++ F +E + L H ++VK G ++++ E G L L + S
Sbjct: 57 KEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKN----SLK 111
Query: 567 VRMNVIKS--VANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
V V+ S + ++Y+ VHRDI+ +N+L+ + DFG+S++++ +
Sbjct: 112 VLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEF-VGTFGYVAP 638
VHRDI NVLL ++ ++DFG + D + S VGT Y++P
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISP 245
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEF-VGTFGYVAP 638
VHRDI NVLL ++ ++DFG + D + S VGT Y++P
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISP 261
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
++ F +E + L H ++VK G ++++ E G L L + S
Sbjct: 53 KEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKN----SLK 107
Query: 567 VRMNVIKS--VANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
V V+ S + ++Y+ VHRDI+ +N+L+ + DFG+S++++ +
Sbjct: 108 VLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 163
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
Query: 462 RATNNFDAKYCIGTAGQASVYKA-ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL 520
R T F IG+ SV+K + I A+K+ P V +Q E+ A L
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 521 -RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRM-NVIKSVANT 578
+H +VV+++ + EY GSLA +S + I + + +++ V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 579 LSYMHHDYFPPIVHRDISSKNVLL 602
L Y+H +VH DI N+ +
Sbjct: 126 LRYIHS---MSLVHMDIKPSNIFI 146
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 507 QQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWT 566
++ F +E + L H ++VK G ++++ E G L L + S
Sbjct: 69 KEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKN----SLK 123
Query: 567 VRMNVIKS--VANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623
V V+ S + ++Y+ VHRDI+ +N+L+ + DFG+S++++ +
Sbjct: 124 VLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 179
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 26 IGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVL 85
+ +++ LK L++G+NQ+S + ++ L+ L L++N N+L +G L++L L L
Sbjct: 261 VKDLTKLKXLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFL 318
Query: 86 YCNGLSGWLP 95
N ++ P
Sbjct: 319 SQNHITDIRP 328
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCN 88
++NL++L++ NQ++ + P + L L +LYI NK+ + L++L++L L +
Sbjct: 65 LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD--ISALQNLTNLRELYLNED 120
Query: 89 GLSGWLPSSFGNLN---NLAIGS---MPXXXXXXXXXXXFHLDLSENQLSGSIPHFLGHL 142
+S P NL +L +G+ + +L ++E+++ P + +L
Sbjct: 121 NISDISP--LANLTKXYSLNLGANHNLSDLSPLSNXTGLNYLTVTESKVKDVTP--IANL 176
Query: 143 SNLAVLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSISNLSNLEGLYLYSSL 202
++L L L N + P L + + P ++N + L L + ++
Sbjct: 177 TDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANXTRLNSLKIGNNK 232
Query: 203 VS--AEIGNLLQLIELEIDNKQLF------------------GQIPK--SLRNFTSLNIV 240
++ + + NL QL LEI Q+ QI L N + LN +
Sbjct: 233 ITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKXLNVGSNQISDISVLNNLSQLNSL 292
Query: 241 HLEQNHLTGNIYEVFGIYPNLTFLDLSQN 269
L N L EV G NLT L LSQN
Sbjct: 293 FLNNNQLGNEDXEVIGGLTNLTTLFLSQN 321
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 55/226 (24%)
Query: 26 IGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVL 85
+ N + L +L + +++ V P I LT L L +N N++ P + L+SL
Sbjct: 151 LSNXTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTA 206
Query: 86 YCNGLSGWLP-SSFGNLNNLAIGSMPXXXXXXXXXXXFHLDLSENQLSGSIPHFLGHLSN 144
Y N ++ P ++ LN+L IG+ N+++ P L +LS
Sbjct: 207 YVNQITDITPVANXTRLNSLKIGN--------------------NKITDLSP--LANLSQ 244
Query: 145 LAVLHLGDNSLFGSIPPILGKVQXXXXXXXXXXXXXXVLPPSISNLSNLEGLYLYSSLVS 204
L L +G N + ++ +L+ L+ L + S+ +S
Sbjct: 245 LTWLEIGTNQISD--------------------------INAVKDLTKLKXLNVGSNQIS 278
Query: 205 --AEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLT 248
+ + NL QL L ++N QL + + + T+L + L QNH+T
Sbjct: 279 DISVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHIT 324
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 109 FSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 162
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 208
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LAGTPEYLAP 207
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 462 RATNNFDAKYCIGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTEL 520
R +F+ C+G G V++A+ + A+K+ P+ ++ ++ E+KAL +L
Sbjct: 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM-REVKALAKL 61
Query: 521 RHRNVVKFY 529
H +V+++
Sbjct: 62 EHPGIVRYF 70
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/99 (15%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Query: 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSK 598
++ + + +L ++ ++++ V +++ +A + ++H ++HRD+
Sbjct: 137 YIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPS 193
Query: 599 NVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVA 637
N+ +D V DFG+ + D + Y
Sbjct: 194 NIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAT 232
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 473 IGTAGQ---ASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFY 529
IG+ Q + Y A L VA+KK P + + E+ + + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 530 GFSFHPRQS-------FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYM 582
F P+++ +L+ E + +L ++ + + S+ + L +
Sbjct: 90 NV-FTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSYLL--------YQMLCGI 139
Query: 583 HHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H + I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 194
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 528 FYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYF 587
FY F R +++ EY+ G L ++SN ++++ V+ + L +H F
Sbjct: 140 FYAFQ-DDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA----LDAIHSMGF 194
Query: 588 PPIVHRDISSKNVLLGLDYDAHVSDFGIS-KFLKPDSSNWSEFVGTFGYVAP 638
+HRD+ N+LL ++DFG K K VGT Y++P
Sbjct: 195 ---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 94 FSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 147
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W+ GT Y+AP
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAP 193
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 528 FYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYF 587
FY F R +++ EY+ G L ++SN ++++ V+ + L +H F
Sbjct: 135 FYAFQ-DDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA----LDAIHSMGF 189
Query: 588 PPIVHRDISSKNVLLGLDYDAHVSDFGIS-KFLKPDSSNWSEFVGTFGYVAP 638
+HRD+ N+LL ++DFG K K VGT Y++P
Sbjct: 190 ---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 95 FSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 148
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 194
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 162
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W+ GT Y+AP
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAP 208
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 528 FYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYF 587
FY F R +++ EY+ G L ++SN ++++ V+ + L +H F
Sbjct: 140 FYAFQ-DDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA----LDAIHSMGF 194
Query: 588 PPIVHRDISSKNVLLGLDYDAHVSDFGIS-KFLKPDSSNWSEFVGTFGYVAP 638
+HRD+ N+LL ++DFG K K VGT Y++P
Sbjct: 195 ---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LXGTPEYLAP 207
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 61/145 (42%), Gaps = 23/145 (15%)
Query: 191 SNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGN 250
SNL+ + +S +S L LI L+I + +SL ++ + N N
Sbjct: 111 SNLKQMSEFSVFLS-----LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165
Query: 251 IY-EVFGIYPNLTFLDLSQNNF-------YGS------LNFSMNNI--TRSIPPKIGKLY 294
++F NLTFLDLSQ + S LN S NN + P K L
Sbjct: 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC--LN 223
Query: 295 QLHKLDFSLNHIVGELPIELGNLKS 319
L LD+SLNHI+ EL + S
Sbjct: 224 SLQVLDYSLNHIMTSKKQELQHFPS 248
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 61/145 (42%), Gaps = 23/145 (15%)
Query: 191 SNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGN 250
SNL+ + +S +S L LI L+I + +SL ++ + N N
Sbjct: 430 SNLKQMSEFSVFLS-----LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 484
Query: 251 IY-EVFGIYPNLTFLDLSQNNF-------YGS------LNFSMNNI--TRSIPPKIGKLY 294
++F NLTFLDLSQ + S LN S NN + P K L
Sbjct: 485 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC--LN 542
Query: 295 QLHKLDFSLNHIVGELPIELGNLKS 319
L LD+SLNHI+ EL + S
Sbjct: 543 SLQVLDYSLNHIMTSKKQELQHFPS 567
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS-------FLLYEY 544
VAVKK P + + E+ L + H+N++ F P+++ +L+ E
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV-FTPQKTLEEFQDVYLVMEL 108
Query: 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL 604
+ +L ++ + + S+ + L + H + I+HRD+ N+++
Sbjct: 109 MD-ANLCQVIHMELDHERMSYLL--------YQMLCGIKHLHSAGIIHRDLKPSNIVVKS 159
Query: 605 DYDAHVSDFGISKFLKPDSSNW--SEFVGTFGYVAP 638
D + DFG+++ S+N+ + +V T Y AP
Sbjct: 160 DCTLKILDFGLARTA---STNFMMTPYVVTRYYRAP 192
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 15/172 (8%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ Q V A E VA+KK P + + E+ + + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 532 SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSY-----MHHDY 586
F P++S ++ + I++ A S ++M + + L Y + H +
Sbjct: 92 -FTPQKSLEEFQ-----DVYIVMELMDA--NLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 587 FPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 194
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 14 ESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPRE 73
ESN L ++ ++ L L + NQ+ + D LT L LY++ NKL+ S+P
Sbjct: 36 ESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ-SLPNG 94
Query: 74 V-GQLSSLKQLVLYCNGLSGWLPSSFGNLNNL 104
V +L+ LK+L L N L F L +L
Sbjct: 95 VFDKLTQLKELALDTNQLKSVPDGIFDRLTSL 126
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 61/145 (42%), Gaps = 23/145 (15%)
Query: 191 SNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGN 250
SNL+ + +S +S L LI L+I + +SL ++ + N N
Sbjct: 406 SNLKQMSEFSVFLS-----LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 460
Query: 251 IY-EVFGIYPNLTFLDLSQNNF-------YGS------LNFSMNNI--TRSIPPKIGKLY 294
++F NLTFLDLSQ + S LN S NN + P K L
Sbjct: 461 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC--LN 518
Query: 295 QLHKLDFSLNHIVGELPIELGNLKS 319
L LD+SLNHI+ EL + S
Sbjct: 519 SLQVLDYSLNHIMTSKKQELQHFPS 543
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/110 (17%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILS-------------NDAAIDEFSWTV 567
+H+N++ G +++ Y +G+L L N ++ ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++ +A + Y+ +HRD++++NVL+ + ++DFG+++
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ Q V A E VA+KK P + + E+ + + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 532 SFHPRQSFLLYEYLGRGSLAIILS-NDAAIDEFSWTVRMNVIKSVANTLSY-----MHHD 585
F P++S ++ + I++ DA + S ++M + + L Y + H
Sbjct: 92 -FTPQKSLEEFQ-----DVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 194
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 17/139 (12%)
Query: 217 EIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLN 276
++ ++F + +FT L + L QN + F +L L+LSQ NF GS++
Sbjct: 281 DLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQ-NFLGSID 339
Query: 277 FSMNNITRSIPPKIGKLYQLHKLDFSLNHI--VGELP-IELGNLKSLNYRALNGNKVYGS 333
M L +L LD S NHI +G+ + L NLK L AL+ N++
Sbjct: 340 SRM----------FENLDKLEVLDLSYNHIRALGDQSFLGLPNLKEL---ALDTNQLKSV 386
Query: 334 LPRVLGSISDLEYLDLSTN 352
+ ++ L+ + L TN
Sbjct: 387 PDGIFDRLTSLQKIWLHTN 405
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 16 NTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREV- 74
N L +I N+ L+ LD+ N + + Q L +LK L ++ N+L+ SVP +
Sbjct: 333 NFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-SVPDGIF 391
Query: 75 GQLSSLKQLVLYCN 88
+L+SL+++ L+ N
Sbjct: 392 DRLTSLQKIWLHTN 405
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ Q V A E VA+KK P + + E+ + + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 532 SFHPRQSFLLYEYLGRGSLAIILS-NDAAIDEFSWTVRMNVIKSVANTLSY-----MHHD 585
F P++S ++ + I++ DA + S ++M + + L Y + H
Sbjct: 92 -FTPQKSLEEFQ-----DVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 194
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 17/173 (9%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ Q V A E VA+KK P + + E+ + + H+N++
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 532 SFHPRQSFLLYE------YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD 585
F P++S ++ L +L ++ + + S+ + L + H
Sbjct: 97 -FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL--------YQMLCGIKHL 147
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 148 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 199
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I F+ + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFAEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 17/173 (9%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ Q V A E VA+KK P + + E+ + + H+N++
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 532 SFHPRQSFLLYE------YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD 585
F P++S ++ L +L ++ + + S+ + L + H
Sbjct: 86 -FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL--------YQMLCGIKHL 136
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 188
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 27 GNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPR 72
G + LK L++ +NQL V D LT L+ ++++ N S PR
Sbjct: 191 GKMPKLKQLNLASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 236
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+++ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 17/173 (9%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ Q V A E VA+KK P + + E+ + + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 532 SFHPRQSFLLYE------YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD 585
F P++S ++ L +L ++ + + S+ + L + H
Sbjct: 92 -FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL--------YQMLCGIKHL 142
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 194
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 70/173 (40%), Gaps = 17/173 (9%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ Q V A E VA+KK P + + E+ + + H+N++
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 532 SFHPRQSFLLYE------YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD 585
F P++S ++ L +L ++ + + S+ + L + H
Sbjct: 94 -FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL--------YQMLCGIKHL 144
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ I+HRD+ N+++ D + DFG+++ S FV T Y AP
Sbjct: 145 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMVPFVVTRYYRAP 196
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 162
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 208
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 17/173 (9%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ Q V A E VA+KK P + + E+ + + H+N++
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 532 SFHPRQSFLLYE------YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD 585
F P++S ++ L +L ++ + + S+ + L + H
Sbjct: 93 -FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL--------YQMLCGIKHL 143
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 195
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ Q V A E VA+KK P + + E+ + + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 532 SFHPRQSFLLYEYLGRGSLAIILS-NDAAIDEFSWTVRMNVIKSVANTLSY-----MHHD 585
F P++S ++ + I++ DA + S ++M + + L Y + H
Sbjct: 92 -FTPQKSLEEFQ-----DVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLVGIKHL 142
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 194
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 129 FSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 182
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 228
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 162
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 208
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 162
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 208
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 162
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 208
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 473 IGTAGQ---ASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFY 529
IG+ Q + Y A L VA+KK P + + E+ + + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 530 GFSFHPRQS-------FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYM 582
F P+++ +L+ E + +L ++ + + S+ + L +
Sbjct: 90 NV-FTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSYLL--------YQMLCGI 139
Query: 583 HHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H + I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 194
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 154
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 200
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ Q V A E VA+KK P + + E+ + + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 532 SFHPRQSFLLYEYLGRGSLAIILS-NDAAIDEFSWTVRMNVIKSVANTLSY-----MHHD 585
F P++S ++ + I++ DA + S ++M + + L Y + H
Sbjct: 92 -FTPQKSLEEFQ-----DVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLVGIKHL 142
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 194
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 222
Query: 636 VAP 638
P
Sbjct: 223 SPP 225
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ Q V A E VA+KK P + + E+ + + H+N++
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 532 SFHPRQSFLLYEYLGRGSLAIILS-NDAAIDEFSWTVRMNVIKSVANTLSY-----MHHD 585
F P++S ++ + I++ DA S ++M + + L Y + H
Sbjct: 92 -FTPQKSLEEFQ-----DVYIVMELMDA---NLSQVIQMELDHERMSYLLYQMLVGIKHL 142
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 194
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 17/173 (9%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ Q V A E VA+KK P + + E+ + + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 532 SFHPRQSFLLYE------YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD 585
F P++S ++ L +L ++ + + S+ + L + H
Sbjct: 92 -FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL--------YQMLCGIKHL 142
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+ I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 194
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/110 (17%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILS-------------NDAAIDEFSWTV 567
+H+N++ G +++ Y +G+L L N ++ ++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 568 RMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
++ +A + Y+ +HRD++++NVL+ + ++DFG+++
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 473 IGTAGQ---ASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFY 529
IG+ Q + Y A L VA+KK P + + E+ + + H+N++
Sbjct: 25 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 530 GFSFHPRQS-------FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYM 582
F P+++ +L+ E + +L ++ + + S+ + L +
Sbjct: 83 NV-FTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSYLL--------YQMLCGI 132
Query: 583 HHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H + I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 187
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSK 598
+++ EY+ G + S+ I FS + T Y+H +++RD+ +
Sbjct: 117 YMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 599 NVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 222
Query: 636 VAP 638
P
Sbjct: 223 SPP 225
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 18/154 (11%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS-------FLLYEY 544
VA+KK P + + E+ + + H+N++ F P+++ +L+ E
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV-FTPQKTLEEFQDVYLVMEL 104
Query: 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL 604
+ +L ++ + + S+ + L + H + I+HRD+ N+++
Sbjct: 105 MD-ANLCQVIQMELDHERMSYLL--------YQMLCGIKHLHSAGIIHRDLKPSNIVVKS 155
Query: 605 DYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
D + DFG+++ S + +V T Y AP
Sbjct: 156 DCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 188
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 473 IGTAGQ---ASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFY 529
IG+ Q + Y A L VA+KK P + + E+ + + H+N++
Sbjct: 33 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 530 GFSFHPRQS-------FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYM 582
F P+++ +L+ E + +L ++ + + S+ + L +
Sbjct: 91 NV-FTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSYLL--------YQMLCGI 140
Query: 583 HHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H + I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 195
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSK 598
+++ EY+ G + S+ I FS + T Y+H +++RD+ +
Sbjct: 117 YMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 599 NVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 473 IGTAGQ---ASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFY 529
IG+ Q + Y A L VA+KK P + + E+ + + H+N++
Sbjct: 31 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 530 GFSFHPRQS-------FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYM 582
F P+++ +L+ E + +L ++ + + S+ + L +
Sbjct: 89 NV-FTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSYLL--------YQMLCGI 138
Query: 583 HHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H + I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 139 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 193
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSK 598
+++ EY+ G + S+ I FS + T Y+H +++RD+ +
Sbjct: 117 YMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 599 NVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 473 IGTAGQ---ASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFY 529
IG+ Q + Y A L VA+KK P + + E+ + + H+N++
Sbjct: 26 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 530 GFSFHPRQS-------FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYM 582
F P+++ +L+ E + +L ++ + + S+ + L +
Sbjct: 84 NV-FTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSYLL--------YQMLCGI 133
Query: 583 HHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H + I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 188
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 222
Query: 636 VAP 638
P
Sbjct: 223 SPP 225
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 207
Query: 636 VAP 638
P
Sbjct: 208 SPP 210
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 473 IGTAGQ---ASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFY 529
IG+ Q + Y A L VA+KK P + + E+ + + H+N++
Sbjct: 33 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 530 GFSFHPRQS-------FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYM 582
F P+++ +L+ E + +L ++ + + S+ + L +
Sbjct: 91 NV-FTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSYLL--------YQMLCGI 140
Query: 583 HHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H + I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 195
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 63/152 (41%), Gaps = 16/152 (10%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ Q V A E VA+KK P + + E+ + + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 532 SFHPRQSFLLYE------YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD 585
F P++S ++ L +L ++ + + S+ + L + H
Sbjct: 92 -FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL--------YQMLCGIKHL 142
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ I+HRD+ N+++ D + DFG+++
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 207
Query: 636 VAP 638
P
Sbjct: 208 SPP 210
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 208
Query: 636 VAP 638
P
Sbjct: 209 SPP 211
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 207
Query: 636 VAP 638
P
Sbjct: 208 SPP 210
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 170 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 227
Query: 636 VAP 638
P
Sbjct: 228 SPP 230
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 207
Query: 636 VAP 638
P
Sbjct: 208 SPP 210
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 208
Query: 636 VAP 638
P
Sbjct: 209 SPP 211
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 473 IGTAGQ---ASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFY 529
IG+ Q + Y A L VA+KK P + + E+ + + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 530 GFSFHPRQS-------FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYM 582
F P+++ +L+ E + +L ++ + + S+ + L +
Sbjct: 90 NV-FTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSYLL--------YQMLCGI 139
Query: 583 HHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
H + I+HRD+ N+++ D + DFG+++ S + +V T Y AP
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 194
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 208
Query: 636 VAP 638
P
Sbjct: 209 SPP 211
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 208
Query: 636 VAP 638
P
Sbjct: 209 SPP 211
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 18/154 (11%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS-------FLLYEY 544
VA+KK P + + E+ + + H+N++ F P+++ +L+ E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV-FTPQKTLEEFQDVYLVMEL 110
Query: 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL 604
+ +L ++ + + S+ + L + H + I+HRD+ N+++
Sbjct: 111 MD-ANLCQVIQMELDHERMSYLL--------YQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 605 DYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
D + DFG+++ S + +V T Y AP
Sbjct: 162 DCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP 194
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+VHRD+ N+LL + D + DF +++ D +N + +V Y AP
Sbjct: 155 VVHRDLHPGNILLADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAP 202
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 63/152 (41%), Gaps = 16/152 (10%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ Q V A E VA+KK P + + E+ + + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 532 SFHPRQSFLLYE------YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD 585
F P++S ++ L +L ++ + + S+ + L + H
Sbjct: 92 -FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL--------YQMLCGIKHL 142
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ I+HRD+ N+++ D + DFG+++
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 121 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 178
Query: 636 VAP 638
P
Sbjct: 179 SPP 181
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 58/133 (43%), Gaps = 17/133 (12%)
Query: 492 VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS-------FLLYEY 544
VAVKK P + + E+ L + H+N++ F P+++ +L+ E
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV-FTPQKTLEEFQDVYLVMEL 110
Query: 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL 604
+ +L ++ + + S+ + L + H + I+HRD+ N+++
Sbjct: 111 MD-ANLCQVIHMELDHERMSYLL--------YQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 605 DYDAHVSDFGISK 617
D + DFG+++
Sbjct: 162 DCTLKILDFGLAR 174
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+VHRD+ N+LL + D + DF +++ D +N + +V Y AP
Sbjct: 155 VVHRDLHPGNILLADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAP 202
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 180
Query: 636 VAP 638
P
Sbjct: 181 SPP 183
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 175
Query: 636 VAP 638
P
Sbjct: 176 SPP 178
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 62/154 (40%), Gaps = 40/154 (25%)
Query: 228 PKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSM-------- 279
P L N SL + H NHL E F PNL +LDLS N+ + F
Sbjct: 60 PTRLTNLHSLLLSH---NHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEV 116
Query: 280 -----NNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSL 334
N+I + QL KL S N I P+EL +GNK L
Sbjct: 117 LLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQI-SRFPVELIK---------DGNK----L 162
Query: 335 PRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKL 368
P+++ LDLS+ N+ +K +L+KL
Sbjct: 163 PKLM-------LLDLSS---NKLKKLPLTDLQKL 186
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 195
Query: 636 VAP 638
P
Sbjct: 196 SPP 198
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 531 FSFHPRQS-FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP 589
FSF + +++ EY+ G + S+ I FS + T Y+H
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 590 IVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAP 638
+++RD+ +N+L+ V+DFG +K +K W GT Y+AP
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAP 207
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 578 TLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVA 637
T Y+H +++RD+ +N+L+ V+DFG +K +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 638 P 638
P
Sbjct: 207 P 207
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 145 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 202
Query: 636 VAP 638
P
Sbjct: 203 SPP 205
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 195
Query: 636 VAP 638
P
Sbjct: 196 SPP 198
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 63/152 (41%), Gaps = 16/152 (10%)
Query: 473 IGTAGQASVYKAELPSWEI-VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGF 531
IG+ Q V A E VA+KK P + + E+ + + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 532 SFHPRQSFLLYE------YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD 585
F P++S ++ L +L ++ + + S+ + L + H
Sbjct: 92 -FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL--------YQMLCGIKHL 142
Query: 586 YFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617
+ I+HRD+ N+++ D + DFG+++
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 194
Query: 636 VAP 638
P
Sbjct: 195 SPP 197
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 175
Query: 636 VAP 638
P
Sbjct: 176 SPP 178
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 179
Query: 636 VAP 638
P
Sbjct: 180 SPP 182
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 175
Query: 636 VAP 638
P
Sbjct: 176 SPP 178
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 578 TLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVA 637
T Y+H +++RD+ +N+L+ V+DFG +K +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 638 P 638
P
Sbjct: 207 P 207
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 578 TLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVA 637
T Y+H +++RD+ +N+L+ V+DFG +K +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 638 P 638
P
Sbjct: 208 P 208
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 194
Query: 636 VAP 638
P
Sbjct: 195 SPP 197
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 578 TLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVA 637
T Y+H +++RD+ +N+L+ V+DFG +K +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 638 P 638
P
Sbjct: 207 P 207
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 578 TLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVA 637
T Y+H +++RD+ +N+L+ V+DFG +K +K W GT Y+A
Sbjct: 148 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 201
Query: 638 P 638
P
Sbjct: 202 P 202
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 180
Query: 636 VAP 638
P
Sbjct: 181 SPP 183
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 179
Query: 636 VAP 638
P
Sbjct: 180 SPP 182
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 578 TLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVA 637
T Y+H +++RD+ +N+++ V+DFG++K +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK--GRTWX-LCGTPEYLA 206
Query: 638 P 638
P
Sbjct: 207 P 207
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 578 TLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVA 637
T Y+H +++RD+ +N+L+ V+DFG +K +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 638 P 638
P
Sbjct: 207 P 207
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 577 NTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPDSSNWSEFVGTFGY 635
L + H + ++HRDI +N+L+ L+ + + DFG LK + +++F GT Y
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVY 180
Query: 636 VAP 638
P
Sbjct: 181 SPP 183
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,769,773
Number of Sequences: 62578
Number of extensions: 776930
Number of successful extensions: 3806
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 455
Number of HSP's that attempted gapping in prelim test: 2073
Number of HSP's gapped (non-prelim): 1426
length of query: 639
length of database: 14,973,337
effective HSP length: 105
effective length of query: 534
effective length of database: 8,402,647
effective search space: 4487013498
effective search space used: 4487013498
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)