Query 046265
Match_columns 639
No_of_seqs 497 out of 3655
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 18:03:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046265.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046265hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.4E-52 4.7E-57 481.1 32.0 421 7-443 201-744 (768)
2 3rgz_A Protein brassinosteroid 100.0 1E-48 3.5E-53 449.0 30.5 397 6-422 178-699 (768)
3 4eco_A Uncharacterized protein 100.0 3.2E-45 1.1E-49 410.6 24.2 379 7-418 82-602 (636)
4 3t6q_A CD180 antigen; protein- 100.0 3.1E-43 1.1E-47 394.0 34.4 401 8-420 35-517 (606)
5 3t6q_A CD180 antigen; protein- 100.0 1.2E-42 4.2E-47 389.1 32.7 401 6-421 57-541 (606)
6 4ecn_A Leucine-rich repeat pro 100.0 4.5E-43 1.5E-47 400.0 27.9 382 6-420 323-844 (876)
7 3vq2_A TLR4, TOLL-like recepto 100.0 1E-41 3.5E-46 381.7 32.7 413 9-441 35-560 (606)
8 1ziw_A TOLL-like receptor 3; i 100.0 4.5E-41 1.5E-45 381.6 34.7 240 7-246 50-364 (680)
9 1ziw_A TOLL-like receptor 3; i 100.0 6.4E-41 2.2E-45 380.3 33.2 399 7-418 26-519 (680)
10 4eco_A Uncharacterized protein 100.0 2.2E-41 7.4E-46 379.6 24.3 346 15-385 192-603 (636)
11 2z63_A TOLL-like receptor 4, v 100.0 1.2E-40 4.2E-45 370.1 29.6 383 8-420 30-511 (570)
12 3vq2_A TLR4, TOLL-like recepto 100.0 1.7E-40 5.9E-45 371.7 30.7 395 2-420 6-490 (606)
13 3j0a_A TOLL-like receptor 5; m 100.0 3.5E-41 1.2E-45 390.4 24.1 398 6-421 24-544 (844)
14 4ecn_A Leucine-rich repeat pro 100.0 2E-40 7E-45 378.2 24.0 344 15-385 434-843 (876)
15 2z63_A TOLL-like receptor 4, v 100.0 2.4E-39 8.3E-44 359.6 31.3 397 2-422 2-489 (570)
16 3v47_A TOLL-like receptor 5B a 100.0 2.6E-39 8.9E-44 349.2 28.8 369 9-422 13-414 (455)
17 2z81_A CD282 antigen, TOLL-lik 100.0 2.8E-39 9.7E-44 357.5 26.7 387 7-420 27-514 (549)
18 3j0a_A TOLL-like receptor 5; m 100.0 2E-39 6.8E-44 375.7 26.4 403 2-421 1-522 (844)
19 2z81_A CD282 antigen, TOLL-lik 100.0 6.4E-39 2.2E-43 354.6 26.5 195 11-225 10-210 (549)
20 2z7x_B TOLL-like receptor 1, v 100.0 3.8E-39 1.3E-43 353.9 24.1 369 9-421 3-461 (520)
21 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.4E-38 1.5E-42 348.6 27.6 375 3-421 28-490 (562)
22 3v47_A TOLL-like receptor 5B a 100.0 1.2E-37 4E-42 336.2 29.7 348 7-385 31-411 (455)
23 2z7x_B TOLL-like receptor 1, v 100.0 4.2E-38 1.4E-42 345.6 24.6 383 7-420 22-485 (520)
24 4b9d_A Serine/threonine-protei 100.0 5E-39 1.7E-43 328.2 11.2 171 465-639 24-195 (350)
25 3omv_A RAF proto-oncogene seri 100.0 1E-37 3.5E-42 314.0 15.8 167 465-639 36-204 (307)
26 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.6E-36 1.2E-40 333.2 29.7 383 7-420 53-514 (562)
27 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-35 4.2E-40 319.0 32.4 342 7-422 43-393 (457)
28 4fih_A Serine/threonine-protei 100.0 4.9E-38 1.7E-42 320.3 12.4 166 465-639 74-240 (346)
29 4g8a_A TOLL-like receptor 4; l 100.0 8.9E-36 3.1E-40 335.1 31.9 396 14-441 38-582 (635)
30 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.7E-38 1.2E-42 316.4 11.1 169 465-639 32-204 (311)
31 2id5_A Lingo-1, leucine rich r 100.0 4.1E-36 1.4E-40 326.1 27.0 320 2-352 6-330 (477)
32 1jl5_A Outer protein YOPM; leu 100.0 2.1E-36 7.1E-41 324.7 23.3 363 7-421 12-416 (454)
33 3fpq_A Serine/threonine-protei 100.0 2E-37 6.9E-42 309.6 14.3 166 468-639 29-200 (290)
34 4asz_A BDNF/NT-3 growth factor 100.0 1.2E-37 4.2E-42 313.5 12.5 170 465-639 13-200 (299)
35 4aoj_A High affinity nerve gro 100.0 2.9E-37 9.9E-42 315.1 14.3 170 465-639 41-230 (329)
36 4fie_A Serine/threonine-protei 100.0 2.9E-37 1E-41 322.4 14.5 166 465-639 151-317 (423)
37 3ubd_A Ribosomal protein S6 ki 100.0 3.9E-38 1.3E-42 316.3 6.7 169 465-639 24-196 (304)
38 4gt4_A Tyrosine-protein kinase 100.0 3.2E-37 1.1E-41 311.8 13.2 169 467-639 28-217 (308)
39 4g31_A Eukaryotic translation 100.0 4.4E-37 1.5E-41 310.0 13.8 172 464-639 4-200 (299)
40 3hyh_A Carbon catabolite-derep 100.0 8E-37 2.7E-41 302.6 13.3 168 464-639 12-181 (275)
41 4g8a_A TOLL-like receptor 4; l 100.0 8.2E-35 2.8E-39 327.2 29.8 385 7-418 53-582 (635)
42 4g3f_A NF-kappa-beta-inducing 100.0 1.4E-36 4.9E-41 308.6 12.0 162 465-639 58-226 (336)
43 2id5_A Lingo-1, leucine rich r 100.0 2.9E-34 9.9E-39 311.6 29.3 318 32-384 13-335 (477)
44 1o6v_A Internalin A; bacterial 100.0 5.7E-34 2E-38 308.1 31.3 341 8-418 48-390 (466)
45 3hmm_A TGF-beta receptor type- 100.0 7.2E-36 2.5E-40 302.6 12.8 166 466-639 4-182 (303)
46 3oja_B Anopheles plasmodium-re 100.0 7.1E-34 2.4E-38 316.7 24.4 335 28-442 49-383 (597)
47 3o6n_A APL1; leucine-rich repe 100.0 1.8E-33 6E-38 297.2 24.9 311 28-417 43-353 (390)
48 4ase_A Vascular endothelial gr 100.0 8E-35 2.7E-39 299.5 13.0 172 464-639 63-257 (353)
49 3o6n_A APL1; leucine-rich repe 100.0 7.5E-33 2.6E-37 292.4 27.1 307 8-383 47-353 (390)
50 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-32 4E-37 295.8 28.9 327 16-418 28-370 (457)
51 1o6v_A Internalin A; bacterial 100.0 1.9E-32 6.7E-37 296.0 29.5 320 6-383 68-389 (466)
52 3oja_B Anopheles plasmodium-re 100.0 9.9E-33 3.4E-37 307.5 27.5 300 9-351 54-354 (597)
53 4b99_A Mitogen-activated prote 100.0 4.6E-34 1.6E-38 299.0 14.6 168 465-639 54-232 (398)
54 1ogq_A PGIP-2, polygalacturona 100.0 1.9E-33 6.6E-38 287.2 17.6 248 31-329 51-302 (313)
55 2ft3_A Biglycan; proteoglycan, 100.0 4.5E-32 1.6E-36 279.8 25.7 289 31-379 34-330 (332)
56 1ogq_A PGIP-2, polygalacturona 100.0 3.2E-33 1.1E-37 285.6 16.4 249 54-352 50-301 (313)
57 1xku_A Decorin; proteoglycan, 100.0 1.5E-31 5.1E-36 275.7 27.5 287 31-379 32-329 (330)
58 4fmz_A Internalin; leucine ric 100.0 1.4E-31 4.6E-36 278.1 27.4 308 25-416 39-346 (347)
59 3v5w_A G-protein coupled recep 100.0 2.6E-33 8.9E-38 305.5 14.0 168 464-639 188-360 (689)
60 4f9c_A Cell division cycle 7-r 100.0 3.3E-33 1.1E-37 289.4 13.3 170 457-639 13-216 (361)
61 4fmz_A Internalin; leucine ric 100.0 2.9E-31 1E-35 275.5 27.2 300 8-381 46-345 (347)
62 1jl5_A Outer protein YOPM; leu 100.0 9.5E-31 3.2E-35 280.7 31.1 335 7-420 72-433 (454)
63 1xku_A Decorin; proteoglycan, 100.0 3.6E-30 1.2E-34 265.3 28.0 295 54-414 31-330 (330)
64 3uto_A Twitchin; kinase, muscl 100.0 6.2E-32 2.1E-36 296.8 14.9 168 464-639 156-326 (573)
65 2ft3_A Biglycan; proteoglycan, 100.0 5.5E-30 1.9E-34 264.2 26.6 291 54-414 33-331 (332)
66 3fe3_A MAP/microtubule affinit 100.0 3.6E-30 1.2E-34 264.5 13.8 169 464-639 14-183 (328)
67 3p86_A Serine/threonine-protei 100.0 1.9E-30 6.5E-35 264.6 10.4 172 464-639 36-209 (309)
68 1o6l_A RAC-beta serine/threoni 100.0 4.8E-30 1.6E-34 264.3 13.4 169 465-639 5-175 (337)
69 3qd2_B Eukaryotic translation 100.0 1.1E-29 3.7E-34 261.7 16.2 173 463-639 4-246 (332)
70 2c30_A Serine/threonine-protei 100.0 1.8E-29 6.2E-34 258.9 16.3 177 454-639 24-211 (321)
71 3uim_A Brassinosteroid insensi 100.0 8.5E-30 2.9E-34 262.1 13.8 185 454-639 19-205 (326)
72 4aw2_A Serine/threonine-protei 100.0 2.9E-30 9.8E-35 274.6 10.0 178 457-639 66-246 (437)
73 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.5E-30 1.6E-34 266.3 11.3 170 464-639 22-194 (353)
74 4dc2_A Protein kinase C IOTA t 100.0 8.1E-30 2.8E-34 267.6 13.1 170 464-639 51-223 (396)
75 3fxz_A Serine/threonine-protei 100.0 1.6E-29 5.4E-34 256.4 14.6 167 464-639 19-186 (297)
76 3soa_A Calcium/calmodulin-depe 100.0 2.1E-29 7.2E-34 268.9 16.0 172 462-639 8-183 (444)
77 2vd5_A DMPK protein; serine/th 100.0 4.3E-30 1.5E-34 271.3 9.9 178 457-639 53-233 (412)
78 3s95_A LIMK-1, LIM domain kina 100.0 3.6E-29 1.2E-33 255.4 16.4 168 465-639 10-192 (310)
79 3a8x_A Protein kinase C IOTA t 100.0 2.2E-29 7.6E-34 260.5 14.9 169 465-639 9-180 (345)
80 2qkw_B Protein kinase; three-h 100.0 1.6E-29 5.5E-34 259.4 13.5 177 458-639 32-211 (321)
81 3niz_A Rhodanese family protei 100.0 2.1E-29 7.2E-34 257.2 14.2 170 464-639 20-189 (311)
82 1z7x_W Ribonuclease inhibitor; 100.0 2.8E-32 9.6E-37 294.6 -7.6 350 6-383 3-412 (461)
83 3v8s_A RHO-associated protein 100.0 3.6E-30 1.2E-34 271.8 8.2 174 459-639 63-239 (410)
84 2nru_A Interleukin-1 receptor- 100.0 9.5E-29 3.3E-33 251.9 18.3 182 454-639 14-205 (307)
85 3zgw_A Maternal embryonic leuc 100.0 2.1E-29 7E-34 260.4 13.3 169 464-639 9-179 (347)
86 3o0g_A Cell division protein k 100.0 3.8E-29 1.3E-33 253.0 15.0 169 465-639 2-171 (292)
87 1xjd_A Protein kinase C, theta 100.0 1.4E-29 4.9E-34 261.5 12.0 171 463-639 15-188 (345)
88 4fr4_A YANK1, serine/threonine 100.0 2.3E-29 7.7E-34 263.3 13.1 168 465-639 15-184 (384)
89 2z80_A TOLL-like receptor 2, v 100.0 1.2E-28 4.3E-33 256.3 18.7 276 11-335 36-318 (353)
90 2yab_A Death-associated protei 100.0 5.3E-29 1.8E-33 258.9 15.5 169 464-639 11-188 (361)
91 2bdw_A Hypothetical protein K1 100.0 6.4E-29 2.2E-33 258.9 15.6 170 463-639 27-200 (362)
92 1ob3_A PFPK5, cell division co 100.0 2.3E-29 7.9E-34 254.1 11.4 169 465-639 2-170 (288)
93 1ozn_A Reticulon 4 receptor; N 100.0 1.1E-27 3.7E-32 241.4 23.7 231 3-273 6-239 (285)
94 1z7x_W Ribonuclease inhibitor; 100.0 8.7E-32 3E-36 290.7 -6.8 359 30-417 3-412 (461)
95 2psq_A Fibroblast growth facto 100.0 8E-29 2.7E-33 259.1 15.8 172 464-639 80-275 (370)
96 2z66_A Variable lymphocyte rec 100.0 2E-28 6.7E-33 249.5 18.0 284 3-339 5-295 (306)
97 2z80_A TOLL-like receptor 2, v 100.0 3.9E-28 1.3E-32 252.6 20.4 275 26-352 27-311 (353)
98 2i0e_A Protein kinase C-beta I 100.0 2.5E-29 8.6E-34 260.5 10.9 170 464-639 19-191 (353)
99 3a62_A Ribosomal protein S6 ki 100.0 3.7E-29 1.3E-33 257.3 11.8 170 464-639 16-191 (327)
100 4eqm_A Protein kinase; transfe 100.0 8.1E-29 2.8E-33 250.8 14.2 169 465-639 11-182 (294)
101 1fot_A TPK1 delta, CAMP-depend 100.0 4.4E-29 1.5E-33 255.2 12.3 167 464-639 5-173 (318)
102 2zv2_A Calcium/calmodulin-depe 100.0 7.2E-29 2.5E-33 251.8 13.7 168 465-639 13-207 (298)
103 4fcg_A Uncharacterized protein 100.0 4.5E-28 1.6E-32 248.9 19.6 195 29-265 80-283 (328)
104 4fcg_A Uncharacterized protein 100.0 5.1E-28 1.7E-32 248.6 19.9 232 7-271 82-313 (328)
105 2r5t_A Serine/threonine-protei 100.0 3.9E-29 1.3E-33 261.0 11.7 170 464-639 37-209 (373)
106 3oja_A Leucine-rich immune mol 100.0 1.8E-30 6.1E-35 281.3 1.6 213 122-382 37-250 (487)
107 1tki_A Titin; serine kinase, m 100.0 1.7E-28 5.9E-33 251.5 16.2 167 464-639 4-173 (321)
108 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.9E-29 1.7E-33 260.6 12.0 168 464-639 64-255 (365)
109 3c0i_A Peripheral plasma membr 100.0 3.3E-29 1.1E-33 260.2 10.4 173 464-639 23-203 (351)
110 3c4z_A Rhodopsin kinase; Ser/T 100.0 9.8E-29 3.4E-33 268.5 13.4 173 464-639 184-359 (543)
111 3p1a_A MYT1 kinase, membrane-a 100.0 1.5E-28 5.1E-33 251.0 13.9 168 465-639 57-226 (311)
112 1rdq_E PKA C-alpha, CAMP-depen 100.0 8.5E-29 2.9E-33 256.5 12.2 167 464-639 40-208 (350)
113 2qol_A Ephrin receptor; recept 100.0 1.7E-28 5.9E-33 256.7 14.5 170 464-639 44-220 (373)
114 2y0a_A Death-associated protei 100.0 2.6E-28 8.8E-33 250.9 15.4 169 464-639 10-187 (326)
115 3zyi_A Leucine-rich repeat-con 100.0 2E-27 6.8E-32 255.7 22.8 246 32-330 56-302 (452)
116 2acx_A G protein-coupled recep 100.0 1E-28 3.6E-33 268.9 12.7 171 464-639 183-355 (576)
117 4agu_A Cyclin-dependent kinase 100.0 2.1E-28 7.3E-33 249.8 14.3 169 465-639 3-172 (311)
118 2pmi_A Negative RE, cyclin-dep 100.0 1.8E-28 6.3E-33 251.0 13.7 171 464-639 4-178 (317)
119 3kul_A Ephrin type-A receptor 100.0 3E-28 1E-32 250.3 15.2 169 465-639 49-224 (325)
120 3tki_A Serine/threonine-protei 100.0 1.2E-28 4.1E-33 252.9 12.1 169 464-639 6-177 (323)
121 4ejn_A RAC-alpha serine/threon 100.0 4.4E-29 1.5E-33 268.0 9.0 170 464-639 147-319 (446)
122 3rp9_A Mitogen-activated prote 100.0 1.8E-28 6.2E-33 264.3 13.7 169 464-639 52-253 (458)
123 4euu_A Serine/threonine-protei 100.0 3E-28 1E-32 249.8 14.1 170 465-639 9-185 (319)
124 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.1E-28 3.8E-33 253.9 10.4 167 465-639 9-177 (336)
125 3soc_A Activin receptor type-2 100.0 2.3E-28 7.7E-33 250.9 12.1 168 464-639 23-203 (322)
126 3zyj_A Leucine-rich repeat-con 100.0 3.6E-27 1.2E-31 252.8 21.9 246 32-330 45-291 (440)
127 4hcu_A Tyrosine-protein kinase 100.0 2.7E-28 9.1E-33 243.7 12.2 167 465-639 10-177 (269)
128 2vuw_A Serine/threonine-protei 100.0 2.4E-29 8.4E-34 259.8 4.7 163 464-639 19-247 (336)
129 1kob_A Twitchin; kinase, intra 100.0 7.9E-28 2.7E-32 252.4 16.2 168 464-639 50-220 (387)
130 2z66_A Variable lymphocyte rec 99.9 3.5E-27 1.2E-31 240.2 20.5 246 32-353 9-259 (306)
131 3lb7_A RAF proto-oncogene seri 99.9 1E-27 3.5E-32 244.2 16.1 167 465-639 36-204 (307)
132 3kn6_A Ribosomal protein S6 ki 99.9 1E-27 3.5E-32 246.2 16.0 159 470-639 16-179 (325)
133 3n9x_A Phosphotransferase; mal 99.9 4.2E-28 1.4E-32 259.1 13.6 169 464-639 25-221 (432)
134 3dls_A PAS domain-containing s 99.9 3.8E-28 1.3E-32 250.5 12.6 171 462-639 21-199 (335)
135 3vhe_A Vascular endothelial gr 99.9 3.7E-28 1.3E-32 253.3 12.6 173 463-639 20-265 (359)
136 3uc3_A Serine/threonine-protei 99.9 4.8E-28 1.6E-32 252.3 13.0 166 464-639 19-187 (361)
137 2y94_A 5'-AMP-activated protei 99.9 3.7E-28 1.3E-32 261.0 12.4 168 465-639 16-185 (476)
138 1luf_A Muscle-specific tyrosin 99.9 5.1E-28 1.7E-32 250.6 13.0 173 463-639 45-246 (343)
139 2x4f_A Myosin light chain kina 99.9 6.2E-28 2.1E-32 252.4 13.7 162 470-639 94-258 (373)
140 3gni_B Strad alpha; kinase fol 99.9 5.7E-28 1.9E-32 254.8 13.5 172 464-639 24-205 (389)
141 3cbl_A C-FES, proto-oncogene t 99.9 4.5E-28 1.6E-32 254.2 12.3 169 465-639 114-285 (377)
142 4aaa_A Cyclin-dependent kinase 99.9 6.5E-28 2.2E-32 248.6 13.2 170 464-639 24-194 (331)
143 2qr7_A Ribosomal protein S6 ki 99.9 8.7E-28 3E-32 248.2 14.0 165 463-639 20-190 (342)
144 3sxs_A Cytoplasmic tyrosine-pr 99.9 7.4E-28 2.5E-32 240.3 12.9 168 464-639 7-175 (268)
145 3ork_A Serine/threonine protei 99.9 2.5E-28 8.5E-33 249.4 9.7 170 464-639 11-189 (311)
146 3tt0_A Basic fibroblast growth 99.9 1.2E-27 4.1E-32 251.5 15.1 172 464-639 68-263 (382)
147 3oz6_A Mitogen-activated prote 99.9 9.8E-28 3.4E-32 252.9 14.4 169 463-639 7-200 (388)
148 3zyi_A Leucine-rich repeat-con 99.9 2E-26 6.9E-31 247.9 24.8 243 57-352 57-300 (452)
149 3dbq_A Dual specificity protei 99.9 8.5E-28 2.9E-32 248.9 13.5 167 465-639 9-179 (343)
150 3gbz_A Kinase, CMGC CDK; ssgci 99.9 3.9E-28 1.3E-32 250.0 10.8 171 462-639 31-207 (329)
151 3l9p_A Anaplastic lymphoma kin 99.9 5.5E-28 1.9E-32 252.5 12.1 171 465-639 71-256 (367)
152 3cok_A Serine/threonine-protei 99.9 8.4E-28 2.9E-32 241.3 12.8 171 464-639 10-182 (278)
153 3pfq_A PKC-B, PKC-beta, protei 99.9 5.2E-28 1.8E-32 271.5 12.3 171 463-639 339-512 (674)
154 1x8b_A WEE1HU, WEE1-like prote 99.9 1.1E-27 3.9E-32 241.4 13.5 170 463-639 9-200 (289)
155 2w4o_A Calcium/calmodulin-depe 99.9 8.2E-28 2.8E-32 249.4 12.6 166 463-639 51-220 (349)
156 3gen_A Tyrosine-protein kinase 99.9 9.1E-28 3.1E-32 241.7 12.4 168 464-639 23-191 (283)
157 2zmd_A Dual specificity protei 99.9 1.2E-27 4.1E-32 252.0 13.8 167 465-639 56-226 (390)
158 3q4u_A Activin receptor type-1 99.9 1.4E-27 4.7E-32 242.5 13.8 163 464-639 7-187 (301)
159 2ivs_A Proto-oncogene tyrosine 99.9 2.1E-27 7E-32 242.8 15.1 172 464-639 22-222 (314)
160 3ugc_A Tyrosine-protein kinase 99.9 5.8E-28 2E-32 244.7 10.9 169 464-639 9-187 (295)
161 2rku_A Serine/threonine-protei 99.9 1.8E-27 6.3E-32 240.8 14.4 170 464-639 14-185 (294)
162 2clq_A Mitogen-activated prote 99.9 2.5E-27 8.6E-32 239.8 15.3 169 466-639 23-193 (295)
163 2owb_A Serine/threonine-protei 99.9 1.8E-27 6E-32 245.7 14.4 170 464-639 40-211 (335)
164 3kk8_A Calcium/calmodulin depe 99.9 1.8E-27 6.2E-32 239.6 14.1 169 464-639 5-177 (284)
165 4eut_A Serine/threonine-protei 99.9 8.7E-28 3E-32 253.8 12.2 170 465-639 9-185 (396)
166 2izr_A Casein kinase I isoform 99.9 1.5E-27 5.2E-32 245.7 13.6 165 465-639 9-187 (330)
167 2y7j_A Phosphorylase B kinase 99.9 3.5E-27 1.2E-31 246.3 16.4 177 456-639 85-269 (365)
168 1u5q_A Serine/threonine protei 99.9 1.3E-27 4.4E-32 247.7 13.0 166 464-639 53-220 (348)
169 3kmu_A ILK, integrin-linked ki 99.9 1.9E-27 6.6E-32 237.4 13.8 165 465-639 10-178 (271)
170 2a2a_A Death-associated protei 99.9 2.4E-27 8.3E-32 243.2 14.8 169 464-639 11-188 (321)
171 1ozn_A Reticulon 4 receptor; N 99.9 7.1E-27 2.4E-31 235.4 17.9 255 32-338 13-268 (285)
172 3ttj_A Mitogen-activated prote 99.9 8.9E-28 3E-32 258.3 12.0 166 464-639 61-233 (464)
173 3lij_A Calcium/calmodulin depe 99.9 1.3E-27 4.4E-32 259.9 13.3 169 464-639 36-208 (494)
174 3zyj_A Leucine-rich repeat-con 99.9 3.6E-26 1.2E-30 245.0 24.3 244 56-352 45-289 (440)
175 1rjb_A FL cytokine receptor; k 99.9 2E-27 6.9E-32 246.3 14.0 172 464-639 44-244 (344)
176 2eue_A Carbon catabolite derep 99.9 2.2E-27 7.5E-32 237.8 13.6 167 465-639 13-181 (275)
177 1ua2_A CAK, cell division prot 99.9 1.2E-27 4E-32 248.2 11.9 172 462-639 7-182 (346)
178 3i6u_A CDS1, serine/threonine- 99.9 2.1E-27 7.1E-32 252.6 14.0 169 463-639 133-311 (419)
179 3g33_A Cell division protein k 99.9 3.1E-27 1E-31 240.9 14.7 171 463-639 7-189 (308)
180 3o53_A Protein LRIM1, AGAP0063 99.9 2.2E-28 7.5E-33 250.3 6.2 263 12-335 16-280 (317)
181 3mwu_A Calmodulin-domain prote 99.9 1.3E-27 4.3E-32 259.6 12.4 169 464-639 21-193 (486)
182 1cm8_A Phosphorylated MAP kina 99.9 2.4E-27 8.3E-32 247.5 14.1 165 464-639 24-195 (367)
183 3qup_A Tyrosine-protein kinase 99.9 1.3E-27 4.5E-32 245.4 11.9 173 464-639 22-209 (323)
184 3mi9_A Cell division protein k 99.9 3.1E-27 1.1E-31 245.6 14.8 169 465-639 17-198 (351)
185 4azs_A Methyltransferase WBDD; 99.9 4.6E-28 1.6E-32 266.1 8.9 159 472-639 241-409 (569)
186 1opk_A P150, C-ABL, proto-onco 99.9 1.9E-27 6.6E-32 258.2 13.6 169 464-639 219-389 (495)
187 2pvf_A Fibroblast growth facto 99.9 3.9E-27 1.3E-31 243.1 15.3 172 464-639 34-229 (334)
188 1wwl_A Monocyte differentiatio 99.9 1.3E-28 4.5E-33 251.4 4.0 250 27-332 40-310 (312)
189 4e5w_A Tyrosine-protein kinase 99.9 2.3E-27 7.7E-32 241.1 13.1 169 465-639 21-199 (302)
190 3f3z_A Calcium/calmodulin-depe 99.9 2.5E-27 8.4E-32 237.7 12.9 167 464-639 8-178 (277)
191 1t46_A HOMO sapiens V-KIT hard 99.9 2.9E-27 1E-31 241.5 13.7 171 465-639 23-217 (313)
192 2w5a_A Serine/threonine-protei 99.9 6.6E-28 2.3E-32 242.1 8.7 173 464-639 5-186 (279)
193 3g06_A SSPH2 (leucine-rich rep 99.9 5.6E-26 1.9E-30 251.1 24.8 263 6-336 40-302 (622)
194 2eva_A TAK1 kinase - TAB1 chim 99.9 2.3E-27 7.8E-32 241.7 12.6 165 465-639 8-173 (307)
195 3is5_A Calcium-dependent prote 99.9 1.9E-27 6.3E-32 239.7 11.8 171 464-639 21-196 (285)
196 1qcf_A Haematopoetic cell kina 99.9 1.3E-27 4.3E-32 257.1 11.1 168 464-639 187-355 (454)
197 3mtl_A Cell division protein k 99.9 7.9E-28 2.7E-32 247.1 9.1 168 465-639 2-170 (324)
198 3q5i_A Protein kinase; CDPK, m 99.9 3.6E-27 1.2E-31 257.1 14.6 169 464-639 35-218 (504)
199 1t4h_A Serine/threonine-protei 99.9 5.2E-27 1.8E-31 237.0 14.7 165 467-639 28-200 (290)
200 2r3i_A Cell division protein k 99.9 2.4E-27 8.1E-32 240.6 12.2 170 465-639 3-173 (299)
201 4f0f_A Serine/threonine-protei 99.9 8.5E-27 2.9E-31 235.0 16.2 165 465-639 19-196 (287)
202 1mp8_A Focal adhesion kinase 1 99.9 3.1E-27 1E-31 237.6 12.7 169 464-639 14-187 (281)
203 3nyv_A Calmodulin-domain prote 99.9 2.4E-27 8.1E-32 257.4 12.6 169 464-639 25-198 (484)
204 1k9a_A Carboxyl-terminal SRC k 99.9 3.9E-27 1.3E-31 252.8 14.2 164 464-639 192-356 (450)
205 1wwl_A Monocyte differentiatio 99.9 2.3E-28 7.9E-33 249.6 4.2 248 50-355 39-309 (312)
206 3fdn_A Serine/threonine-protei 99.9 1.8E-27 6.2E-32 239.0 10.5 168 464-639 8-177 (279)
207 3hko_A Calcium/calmodulin-depe 99.9 1.6E-27 5.5E-32 247.1 10.4 176 461-639 22-244 (345)
208 3og7_A AKAP9-BRAF fusion prote 99.9 3.5E-27 1.2E-31 238.2 12.6 168 464-639 23-192 (289)
209 1vzo_A Ribosomal protein S6 ki 99.9 6.1E-28 2.1E-32 251.1 7.0 170 464-639 53-230 (355)
210 3kfa_A Tyrosine-protein kinase 99.9 1.1E-27 3.9E-32 241.5 8.8 170 463-639 11-182 (288)
211 1nxk_A MAP kinase-activated pr 99.9 3.2E-27 1.1E-31 249.5 12.5 163 465-639 61-233 (400)
212 3a7i_A MST3 kinase, serine/thr 99.9 7.9E-27 2.7E-31 237.3 14.8 167 465-639 22-189 (303)
213 1p4o_A Insulin-like growth fac 99.9 2.4E-27 8.1E-32 243.3 11.0 173 463-639 23-210 (322)
214 2wqm_A Serine/threonine-protei 99.9 6.8E-27 2.3E-31 238.6 14.1 173 464-639 31-206 (310)
215 3gxj_A TGF-beta receptor type- 99.9 7.2E-28 2.5E-32 244.8 6.7 162 465-639 3-182 (303)
216 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 3E-27 1E-31 253.9 11.8 168 464-639 183-351 (452)
217 2ac3_A MAP kinase-interacting 99.9 7.2E-27 2.5E-31 239.1 13.9 167 465-639 12-191 (316)
218 3lm5_A Serine/threonine-protei 99.9 3.2E-27 1.1E-31 242.9 11.2 173 462-639 25-203 (327)
219 3lxl_A Tyrosine-protein kinase 99.9 7.5E-27 2.5E-31 240.2 13.9 169 464-639 22-200 (327)
220 3bhy_A Death-associated protei 99.9 7.9E-27 2.7E-31 234.7 13.8 168 465-639 5-181 (283)
221 3t9t_A Tyrosine-protein kinase 99.9 4E-27 1.4E-31 234.7 11.5 167 465-639 8-175 (267)
222 2yex_A Serine/threonine-protei 99.9 8.7E-27 3E-31 233.5 13.8 169 464-639 6-177 (276)
223 3poz_A Epidermal growth factor 99.9 3.5E-27 1.2E-31 242.6 11.1 168 465-639 15-189 (327)
224 3lxp_A Non-receptor tyrosine-p 99.9 1.7E-26 5.9E-31 236.5 15.9 165 467-639 33-207 (318)
225 3dtc_A Mitogen-activated prote 99.9 5.8E-27 2E-31 234.1 12.1 168 465-639 7-184 (271)
226 4fvq_A Tyrosine-protein kinase 99.9 2.7E-27 9.4E-32 238.9 9.8 165 464-639 7-187 (289)
227 3llt_A Serine/threonine kinase 99.9 1.6E-26 5.5E-31 241.0 15.7 166 463-639 33-229 (360)
228 3mdy_A Bone morphogenetic prot 99.9 1.1E-26 3.8E-31 239.9 14.3 167 463-639 35-216 (337)
229 3brb_A Proto-oncogene tyrosine 99.9 9.3E-27 3.2E-31 237.9 13.4 174 463-639 32-219 (313)
230 3pg1_A Mitogen-activated prote 99.9 6E-27 2E-31 244.5 12.2 177 456-639 13-203 (362)
231 2h34_A Serine/threonine-protei 99.9 1E-26 3.4E-31 237.2 13.4 170 464-639 33-205 (309)
232 2a19_B Interferon-induced, dou 99.9 6.5E-27 2.2E-31 235.4 11.8 165 464-639 10-191 (284)
233 3byv_A Rhoptry kinase; malaria 99.9 1.2E-27 4E-32 251.2 6.5 168 464-639 72-272 (377)
234 1zy4_A Serine/threonine-protei 99.9 8.2E-27 2.8E-31 236.8 12.5 169 463-639 4-200 (303)
235 2xrw_A Mitogen-activated prote 99.9 9.4E-27 3.2E-31 243.7 13.3 166 464-639 24-196 (371)
236 3c1x_A Hepatocyte growth facto 99.9 6.1E-27 2.1E-31 244.8 11.7 168 466-639 90-266 (373)
237 2h6d_A 5'-AMP-activated protei 99.9 8.2E-27 2.8E-31 233.7 12.1 168 465-639 11-180 (276)
238 2xir_A Vascular endothelial gr 99.9 1.2E-26 4.3E-31 237.2 13.6 173 463-639 25-220 (316)
239 2fst_X Mitogen-activated prote 99.9 6E-27 2.1E-31 244.4 11.4 165 464-639 28-199 (367)
240 3g06_A SSPH2 (leucine-rich rep 99.9 6.2E-25 2.1E-29 242.8 27.9 255 30-352 40-294 (622)
241 3kex_A Receptor tyrosine-prote 99.9 4.5E-27 1.5E-31 241.6 10.1 168 465-639 13-187 (325)
242 3eqc_A Dual specificity mitoge 99.9 5.2E-27 1.8E-31 244.8 10.6 168 464-639 32-200 (360)
243 1qpc_A LCK kinase; alpha beta 99.9 1E-26 3.5E-31 233.5 12.3 167 465-639 13-180 (279)
244 2vgo_A Serine/threonine-protei 99.9 7.1E-27 2.4E-31 235.3 11.2 168 464-639 13-182 (284)
245 2i1m_A Macrophage colony-stimu 99.9 6.5E-27 2.2E-31 241.3 11.1 172 464-639 45-236 (333)
246 3com_A Serine/threonine-protei 99.9 1.3E-26 4.5E-31 236.8 13.2 167 464-639 28-195 (314)
247 3o53_A Protein LRIM1, AGAP0063 99.9 2E-28 6.8E-33 250.7 -0.4 258 32-377 12-270 (317)
248 3f66_A Hepatocyte growth facto 99.9 1.6E-26 5.3E-31 234.5 13.6 169 465-639 25-202 (298)
249 2pml_X PFPK7, Ser/Thr protein 99.9 5.2E-27 1.8E-31 243.6 10.2 169 464-639 30-220 (348)
250 1phk_A Phosphorylase kinase; g 99.9 2.6E-26 8.9E-31 232.8 15.2 169 464-639 16-193 (298)
251 2jam_A Calcium/calmodulin-depe 99.9 1.8E-26 6E-31 234.8 13.8 166 464-639 8-177 (304)
252 3oja_A Leucine-rich immune mol 99.9 4.2E-27 1.4E-31 254.9 9.6 237 29-326 33-270 (487)
253 1mqb_A Ephrin type-A receptor 99.9 1.5E-26 5E-31 238.5 13.2 169 465-639 44-220 (333)
254 2j7t_A Serine/threonine-protei 99.9 4E-27 1.4E-31 239.3 8.8 169 464-639 18-187 (302)
255 2z62_A TOLL-like receptor 4, v 99.9 8.6E-26 2.9E-30 226.4 18.2 234 2-272 2-237 (276)
256 1u59_A Tyrosine-protein kinase 99.9 2.7E-26 9.3E-31 231.4 14.6 167 466-639 10-183 (287)
257 3fme_A Dual specificity mitoge 99.9 9.5E-27 3.3E-31 235.0 11.0 172 464-639 6-179 (290)
258 4fl3_A Tyrosine-protein kinase 99.9 8.8E-27 3E-31 259.7 11.7 162 471-639 375-542 (635)
259 4e7w_A Glycogen synthase kinas 99.9 8.1E-27 2.8E-31 246.0 10.7 165 465-639 40-211 (394)
260 1xbb_A Tyrosine-protein kinase 99.9 1.9E-26 6.4E-31 233.1 13.0 168 465-639 16-190 (291)
261 1csn_A Casein kinase-1; phosph 99.9 3.2E-26 1.1E-30 232.1 14.7 166 464-639 9-188 (298)
262 3op5_A Serine/threonine-protei 99.9 7.5E-27 2.6E-31 243.9 10.3 170 464-639 34-231 (364)
263 2x7f_A TRAF2 and NCK-interacti 99.9 1.4E-26 4.9E-31 237.9 11.9 170 463-639 22-199 (326)
264 3nsz_A CK II alpha, casein kin 99.9 4.1E-26 1.4E-30 234.9 15.3 160 465-639 36-200 (330)
265 2ycf_A Serine/threonine-protei 99.9 1.2E-26 4E-31 238.2 11.1 168 464-639 9-186 (322)
266 2vwi_A Serine/threonine-protei 99.9 7.9E-27 2.7E-31 237.1 9.7 172 464-639 14-196 (303)
267 1b6c_B TGF-B superfamily recep 99.9 4.2E-26 1.4E-30 236.1 15.2 165 462-639 39-221 (342)
268 2ozo_A Tyrosine-protein kinase 99.9 1.9E-26 6.3E-31 256.4 13.4 161 472-639 343-509 (613)
269 2w1i_A JAK2; chromosomal rearr 99.9 3.5E-26 1.2E-30 235.0 14.5 169 464-639 40-218 (326)
270 2yfx_A Tyrosine-protein kinase 99.9 1.9E-26 6.5E-31 237.1 12.4 172 464-639 29-215 (327)
271 3pls_A Macrophage-stimulating 99.9 3.7E-26 1.3E-30 231.6 14.2 167 467-639 23-198 (298)
272 1fvr_A Tyrosine-protein kinase 99.9 2.5E-26 8.4E-31 236.3 13.0 170 465-639 25-211 (327)
273 2h8h_A Proto-oncogene tyrosine 99.9 7.1E-27 2.4E-31 256.1 9.3 168 464-639 266-434 (535)
274 4exu_A Mitogen-activated prote 99.9 2.1E-26 7.2E-31 241.0 12.2 164 464-639 41-211 (371)
275 3an0_A Dual specificity mitoge 99.9 1.6E-26 5.4E-31 239.1 10.8 171 464-639 50-223 (340)
276 3cc6_A Protein tyrosine kinase 99.9 3.7E-26 1.3E-30 229.7 13.1 169 464-639 11-184 (281)
277 3ll6_A Cyclin G-associated kin 99.9 2.9E-26 9.9E-31 236.6 12.6 169 465-639 28-220 (337)
278 2pzi_A Probable serine/threoni 99.9 2.6E-26 8.8E-31 259.3 13.3 161 465-639 80-247 (681)
279 3g2f_A Bone morphogenetic prot 99.9 1.8E-26 6.2E-31 238.2 10.9 166 464-639 12-198 (336)
280 3qyz_A Mitogen-activated prote 99.9 3.5E-26 1.2E-30 238.8 13.1 167 464-639 26-201 (364)
281 3eb0_A Putative uncharacterize 99.9 2.5E-26 8.5E-31 241.6 11.9 167 462-639 4-211 (383)
282 2buj_A Serine/threonine-protei 99.9 2.4E-26 8.2E-31 235.3 11.3 171 464-639 28-213 (317)
283 2v62_A Serine/threonine-protei 99.9 1.7E-26 5.8E-31 239.3 10.1 168 465-639 37-230 (345)
284 1j1b_A Glycogen synthase kinas 99.9 1.9E-26 6.4E-31 245.3 10.7 164 465-639 54-226 (420)
285 3coi_A Mitogen-activated prote 99.9 4.4E-26 1.5E-30 237.0 12.8 163 465-639 24-193 (353)
286 3lzb_A Epidermal growth factor 99.9 3.1E-26 1.1E-30 235.4 11.3 169 464-639 14-189 (327)
287 3e3p_A Protein kinase, putativ 99.9 3.3E-26 1.1E-30 238.7 11.4 175 458-639 16-201 (360)
288 2wei_A Calmodulin-domain prote 99.9 4.7E-26 1.6E-30 229.7 12.2 170 463-639 20-193 (287)
289 3kvw_A DYRK2, dual specificity 99.9 9E-26 3.1E-30 240.6 15.1 165 464-639 96-269 (429)
290 2b9h_A MAP kinase FUS3, mitoge 99.9 6.8E-26 2.3E-30 235.6 13.7 167 464-639 10-192 (353)
291 2wtk_C Serine/threonine-protei 99.9 4.5E-26 1.5E-30 231.8 12.1 171 464-639 4-181 (305)
292 3cek_A Dual specificity protei 99.9 7.1E-26 2.4E-30 231.4 13.2 168 464-639 27-198 (313)
293 3q60_A ROP5B; pseudokinase, tr 99.9 1.8E-26 6E-31 241.7 8.9 166 465-639 62-261 (371)
294 1blx_A Cyclin-dependent kinase 99.9 2.6E-26 8.9E-31 235.9 9.8 171 463-639 9-189 (326)
295 1byg_A CSK, protein (C-termina 99.9 2.9E-26 1E-30 230.0 9.8 164 464-639 20-184 (278)
296 3rgf_A Cyclin-dependent kinase 99.9 2.5E-26 8.4E-31 243.5 9.6 167 465-639 20-205 (405)
297 2j0j_A Focal adhesion kinase 1 99.9 1.1E-25 3.8E-30 251.8 14.3 169 464-639 389-562 (656)
298 1u46_A ACK-1, activated CDC42 99.9 8.5E-26 2.9E-30 228.1 11.4 169 465-639 18-194 (291)
299 2y4i_B KSR2, HKSR2, kinase sup 99.9 3E-26 1E-30 234.7 7.8 168 464-639 32-204 (319)
300 2rio_A Serine/threonine-protei 99.9 7.2E-26 2.5E-30 241.8 10.5 164 467-639 17-202 (434)
301 3qa8_A MGC80376 protein; kinas 99.9 1E-25 3.4E-30 247.9 11.5 171 464-639 13-193 (676)
302 2i6l_A Mitogen-activated prote 99.9 2E-25 6.7E-30 228.6 12.9 165 465-639 11-194 (320)
303 4hgt_A Casein kinase I isoform 99.9 2.7E-25 9.1E-30 225.0 13.7 167 463-639 7-185 (296)
304 2jii_A Serine/threonine-protei 99.9 2.6E-26 8.8E-31 238.7 6.3 163 465-639 42-238 (352)
305 3ogk_B Coronatine-insensitive 99.9 1.9E-27 6.4E-32 265.1 -2.7 380 24-417 67-527 (592)
306 3aln_A Dual specificity mitoge 99.9 2.5E-25 8.5E-30 228.8 13.3 170 465-639 22-195 (327)
307 2iwi_A Serine/threonine-protei 99.9 4.8E-26 1.6E-30 232.5 7.7 170 462-639 28-208 (312)
308 3a99_A Proto-oncogene serine/t 99.9 7.2E-26 2.5E-30 232.0 9.0 169 463-639 41-218 (320)
309 3p23_A Serine/threonine-protei 99.9 1.5E-25 5.1E-30 238.8 10.9 164 465-639 24-196 (432)
310 1wak_A Serine/threonine-protei 99.9 2.8E-25 9.6E-30 234.7 12.8 165 465-639 37-263 (397)
311 1z57_A Dual specificity protei 99.9 4.7E-25 1.6E-29 227.6 14.2 165 464-639 13-204 (339)
312 3fhr_A MAP kinase-activated pr 99.9 4.3E-25 1.5E-29 227.8 13.4 163 464-639 27-199 (336)
313 2dyl_A Dual specificity mitoge 99.9 3.1E-25 1.1E-29 227.0 12.1 170 464-639 24-194 (318)
314 3uzp_A CKI-delta, CKID, casein 99.9 4.6E-25 1.6E-29 223.3 13.2 166 464-639 8-185 (296)
315 3sv0_A Casein kinase I-like; t 99.9 8.4E-25 2.9E-29 235.3 14.7 166 464-639 6-183 (483)
316 2z62_A TOLL-like receptor 4, v 99.9 7.7E-24 2.6E-28 212.1 20.7 127 34-180 11-137 (276)
317 2vx3_A Dual specificity tyrosi 99.9 1.5E-24 5.1E-29 227.9 14.4 167 464-639 53-228 (382)
318 3en9_A Glycoprotease, O-sialog 99.9 1.5E-25 5E-30 244.8 6.6 155 468-639 339-506 (540)
319 2o6q_A Variable lymphocyte rec 99.9 2.6E-23 8.9E-28 207.5 22.4 160 3-182 12-172 (270)
320 2eu9_A Dual specificity protei 99.9 2.4E-24 8.1E-29 223.9 13.9 165 464-639 18-209 (355)
321 2o6q_A Variable lymphocyte rec 99.9 6.1E-23 2.1E-27 204.8 23.0 201 31-271 17-217 (270)
322 1q8y_A SR protein kinase; tran 99.9 1.5E-24 5.1E-29 227.2 11.2 165 465-639 19-205 (373)
323 3uqc_A Probable conserved tran 99.9 1.4E-23 4.9E-28 211.1 14.9 145 465-617 31-177 (286)
324 3rfs_A Internalin B, repeat mo 99.9 2.3E-23 7.8E-28 208.1 16.2 211 26-319 37-247 (272)
325 3ogk_B Coronatine-insensitive 99.9 4.4E-26 1.5E-30 254.0 -4.2 356 46-416 65-501 (592)
326 1p9a_G Platelet glycoprotein I 99.9 1.2E-22 4.1E-27 204.6 20.5 138 25-185 5-142 (290)
327 3rfs_A Internalin B, repeat mo 99.9 4.9E-23 1.7E-27 205.7 16.8 204 8-259 43-246 (272)
328 2xwt_C Thyrotropin receptor; s 99.9 8E-23 2.7E-27 200.1 17.4 205 19-269 23-236 (239)
329 1p9a_G Platelet glycoprotein I 99.9 2.1E-22 7.2E-27 202.8 20.5 204 49-307 5-208 (290)
330 3goz_A Leucine-rich repeat-con 99.9 2.1E-24 7E-29 225.1 3.7 265 12-309 4-299 (362)
331 3m19_A Variable lymphocyte rec 99.9 5E-22 1.7E-26 195.9 19.8 179 2-200 9-188 (251)
332 3m2w_A MAP kinase-activated pr 99.9 7E-23 2.4E-27 207.6 13.9 146 465-621 17-172 (299)
333 3dzo_A Rhoptry kinase domain; 99.9 3.1E-23 1.1E-27 220.0 8.1 168 464-639 77-277 (413)
334 4glp_A Monocyte differentiatio 99.9 2.1E-22 7.3E-27 205.1 13.7 229 30-308 64-308 (310)
335 1zar_A RIO2 kinase; serine kin 99.9 7.6E-23 2.6E-27 204.8 9.1 146 457-620 82-243 (282)
336 2xwt_C Thyrotropin receptor; s 99.9 1.3E-21 4.6E-26 191.3 16.7 186 42-271 23-217 (239)
337 4ay9_X Follicle-stimulating ho 99.9 1.8E-21 6.1E-26 201.8 18.2 90 10-102 13-104 (350)
338 2ca6_A RAN GTPase-activating p 99.9 1.4E-23 4.9E-28 220.8 2.3 247 21-311 23-320 (386)
339 3goz_A Leucine-rich repeat-con 99.9 1E-23 3.4E-28 219.9 1.1 237 7-272 23-297 (362)
340 3m19_A Variable lymphocyte rec 99.9 4.7E-21 1.6E-25 188.9 19.9 181 30-250 14-194 (251)
341 4ay9_X Follicle-stimulating ho 99.9 2.5E-21 8.6E-26 200.7 16.2 250 25-329 5-257 (350)
342 2ast_B S-phase kinase-associat 99.9 6.5E-23 2.2E-27 211.5 3.8 255 31-340 48-315 (336)
343 2ca6_A RAN GTPase-activating p 99.9 3.4E-23 1.2E-27 218.0 -0.2 137 211-354 159-315 (386)
344 2p1m_B Transport inhibitor res 99.9 3.5E-24 1.2E-28 238.7 -8.7 259 141-416 209-494 (594)
345 4glp_A Monocyte differentiatio 99.8 3.2E-21 1.1E-25 196.4 13.2 200 28-249 89-308 (310)
346 1h6u_A Internalin H; cell adhe 99.8 9.6E-21 3.3E-25 192.5 16.5 194 26-272 37-230 (308)
347 2o6s_A Variable lymphocyte rec 99.8 2.7E-20 9.4E-25 177.8 17.2 186 3-236 5-190 (208)
348 2ast_B S-phase kinase-associat 99.8 3.8E-22 1.3E-26 205.7 4.2 256 55-367 48-315 (336)
349 2p1m_B Transport inhibitor res 99.8 5.9E-23 2E-27 228.8 -5.5 360 27-415 102-518 (594)
350 1h6u_A Internalin H; cell adhe 99.8 4.8E-20 1.6E-24 187.4 16.3 215 32-313 21-235 (308)
351 3cvr_A Invasion plasmid antige 99.8 6.1E-20 2.1E-24 200.4 17.7 118 31-185 60-177 (571)
352 2o6s_A Variable lymphocyte rec 99.8 1.7E-19 6E-24 172.2 17.3 162 7-192 29-190 (208)
353 2v9t_B SLIT homolog 2 protein 99.8 1.9E-19 6.6E-24 173.4 15.7 157 3-180 9-165 (220)
354 3cvr_A Invasion plasmid antige 99.8 1.5E-19 5.1E-24 197.4 16.7 188 55-318 60-254 (571)
355 2v70_A SLIT-2, SLIT homolog 2 99.8 1.7E-19 5.7E-24 173.8 15.0 158 3-181 9-167 (220)
356 3e6j_A Variable lymphocyte rec 99.8 1.4E-18 4.8E-23 168.5 17.2 158 3-182 17-174 (229)
357 2xot_A Amphoterin-induced prot 99.8 4.1E-19 1.4E-23 184.8 13.7 168 3-191 16-187 (361)
358 2v9t_B SLIT homolog 2 protein 99.8 1.9E-18 6.6E-23 166.3 17.3 151 32-202 13-163 (220)
359 1zth_A RIO1 serine protein kin 99.8 2.6E-19 9E-24 176.9 11.1 139 467-620 49-220 (258)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 2.1E-18 7.2E-23 166.1 16.9 151 32-202 13-164 (220)
361 2xot_A Amphoterin-induced prot 99.8 1.9E-18 6.6E-23 179.7 14.6 131 32-182 20-151 (361)
362 3e6j_A Variable lymphocyte rec 99.8 9.8E-18 3.3E-22 162.5 18.0 149 32-201 21-169 (229)
363 1m9s_A Internalin B; cell inva 99.8 1.7E-18 5.9E-23 191.0 13.2 174 26-250 39-212 (605)
364 1h6t_A Internalin B; cell adhe 99.8 3.1E-18 1.1E-22 172.4 13.2 175 26-251 42-216 (291)
365 1m9s_A Internalin B; cell inva 99.7 6.4E-18 2.2E-22 186.5 15.2 192 29-273 20-211 (605)
366 4ezg_A Putative uncharacterize 99.7 8.3E-18 2.8E-22 159.0 13.3 152 25-200 39-190 (197)
367 1dce_A Protein (RAB geranylger 99.7 7E-21 2.4E-25 208.9 -11.2 103 144-271 442-545 (567)
368 1h6t_A Internalin B; cell adhe 99.7 2.4E-17 8E-22 166.0 15.0 162 7-199 47-208 (291)
369 1w8a_A SLIT protein; signaling 99.7 3.3E-17 1.1E-21 154.2 13.8 136 3-159 6-142 (192)
370 1dce_A Protein (RAB geranylger 99.7 2.1E-20 7.3E-25 205.1 -11.0 220 140-410 346-567 (567)
371 4ezg_A Putative uncharacterize 99.7 4.3E-17 1.5E-21 154.1 12.8 150 7-181 45-195 (197)
372 1w8a_A SLIT protein; signaling 99.7 8.1E-17 2.8E-21 151.4 13.2 131 33-183 11-142 (192)
373 4b8c_D Glucose-repressible alc 99.7 3.4E-18 1.2E-22 193.4 3.5 215 9-271 176-403 (727)
374 1xeu_A Internalin C; cellular 99.7 9.1E-17 3.1E-21 159.1 13.2 159 12-202 25-183 (263)
375 1xeu_A Internalin C; cellular 99.7 6E-18 2E-22 167.6 4.6 171 28-250 17-187 (263)
376 4b8c_D Glucose-repressible alc 99.7 1E-17 3.4E-22 189.6 6.3 129 30-180 173-306 (727)
377 2ell_A Acidic leucine-rich nuc 99.7 1.7E-16 5.7E-21 145.9 12.1 138 28-185 22-164 (168)
378 4gyi_A RIO2 kinase; protein ki 99.7 2E-17 6.8E-22 169.6 4.7 141 465-619 95-265 (397)
379 2wfh_A SLIT homolog 2 protein 99.7 8.6E-16 3E-20 144.4 13.6 127 33-180 13-139 (193)
380 2je0_A Acidic leucine-rich nuc 99.6 1.6E-16 5.5E-21 142.9 8.0 128 29-175 16-148 (149)
381 3sb4_A Hypothetical leucine ri 99.6 5.9E-17 2E-21 166.2 5.6 82 289-375 245-327 (329)
382 2wfh_A SLIT homolog 2 protein 99.6 9.7E-16 3.3E-20 144.1 13.4 134 2-157 7-140 (193)
383 2o6r_A Variable lymphocyte rec 99.6 1.3E-15 4.4E-20 141.2 14.0 135 3-158 5-139 (177)
384 2o6r_A Variable lymphocyte rec 99.6 2.8E-15 9.5E-20 139.0 14.2 133 32-184 9-141 (177)
385 2ell_A Acidic leucine-rich nuc 99.6 8.9E-16 3.1E-20 141.0 9.6 137 6-162 24-165 (168)
386 3sb4_A Hypothetical leucine ri 99.6 6.3E-16 2.2E-20 158.5 8.8 214 122-349 104-328 (329)
387 2je0_A Acidic leucine-rich nuc 99.6 6.5E-16 2.2E-20 138.8 6.9 129 52-199 15-148 (149)
388 1a9n_A U2A', U2A'; complex (nu 99.5 7E-15 2.4E-19 136.1 8.4 134 24-180 13-153 (176)
389 1ds9_A Outer arm dynein; leuci 99.5 7.2E-17 2.5E-21 152.7 -10.7 138 26-185 14-158 (198)
390 3g39_A Variable lymphocyte rec 99.5 2.7E-13 9.3E-18 124.5 12.7 105 33-157 12-116 (170)
391 1ds9_A Outer arm dynein; leuci 99.5 1.3E-16 4.4E-21 150.9 -10.1 147 10-180 22-185 (198)
392 3g39_A Variable lymphocyte rec 99.5 2.9E-13 9.8E-18 124.3 12.3 112 3-135 7-118 (170)
393 1a9n_A U2A', U2A'; complex (nu 99.5 5.7E-14 1.9E-18 129.9 7.4 131 48-201 13-150 (176)
394 4fdw_A Leucine rich hypothetic 99.5 3.1E-12 1.1E-16 134.1 21.5 264 28-352 111-380 (401)
395 4fdw_A Leucine rich hypothetic 99.5 4.2E-12 1.4E-16 133.1 22.5 270 52-380 111-381 (401)
396 2r9u_A Variable lymphocyte rec 99.5 4.4E-13 1.5E-17 123.5 12.5 104 33-156 15-118 (174)
397 2r9u_A Variable lymphocyte rec 99.4 4.7E-13 1.6E-17 123.3 12.1 111 3-134 10-120 (174)
398 4fs7_A Uncharacterized protein 99.4 1.5E-11 5.1E-16 129.1 20.3 309 24-378 65-375 (394)
399 4fs7_A Uncharacterized protein 99.3 3E-10 1E-14 119.2 22.0 315 42-413 59-376 (394)
400 2ifg_A High affinity nerve gro 99.2 1.7E-11 5.8E-16 126.4 10.8 66 26-91 27-93 (347)
401 3tm0_A Aminoglycoside 3'-phosp 99.2 4.1E-11 1.4E-15 118.3 12.5 146 462-618 11-213 (263)
402 2ifg_A High affinity nerve gro 99.2 2.6E-11 9E-16 125.0 11.4 103 34-156 12-116 (347)
403 1nd4_A Aminoglycoside 3'-phosp 99.1 1.1E-10 3.6E-15 115.0 9.4 130 474-619 29-215 (264)
404 3un9_A NLR family member X1; l 99.0 4.2E-12 1.4E-16 131.7 -6.7 165 29-205 71-253 (372)
405 3dxp_A Putative acyl-COA dehyd 99.0 1.7E-09 5.8E-14 111.9 12.8 142 470-618 43-248 (359)
406 3un9_A NLR family member X1; l 99.0 5.7E-11 1.9E-15 123.2 0.9 136 210-352 71-221 (372)
407 4gt6_A Cell surface protein; l 99.0 7E-08 2.4E-12 101.0 23.2 110 252-379 258-367 (394)
408 4gt6_A Cell surface protein; l 98.9 1.2E-07 4.1E-12 99.2 21.5 323 21-379 54-388 (394)
409 4h09_A Hypothetical leucine ri 98.6 4.7E-06 1.6E-10 86.5 23.1 286 26-351 42-342 (379)
410 2ra8_A Uncharacterized protein 98.6 1.9E-08 6.7E-13 103.3 3.8 58 31-88 108-182 (362)
411 3r70_A Aminoglycoside phosphot 98.5 7.2E-07 2.5E-11 90.4 13.8 137 466-619 38-238 (320)
412 2ra8_A Uncharacterized protein 98.5 7.3E-08 2.5E-12 99.0 5.6 111 143-267 107-227 (362)
413 4h09_A Hypothetical leucine ri 98.5 1.1E-05 3.9E-10 83.6 21.9 288 48-379 40-343 (379)
414 3sg8_A APH(2'')-ID; antibiotic 98.4 5.3E-07 1.8E-11 90.7 9.2 137 470-619 25-224 (304)
415 3d1u_A Putative fructosamine-3 98.4 1.4E-06 4.7E-11 86.7 10.8 140 470-617 20-215 (288)
416 3rw6_A Nuclear RNA export fact 98.3 2.4E-08 8.1E-13 97.4 -3.8 49 123-173 200-257 (267)
417 3tdw_A Gentamicin resistance p 98.2 1.1E-05 3.9E-10 80.9 13.4 74 471-552 25-102 (306)
418 3rw6_A Nuclear RNA export fact 98.2 4.6E-07 1.6E-11 88.3 2.9 69 256-335 167-237 (267)
419 1io0_A Tropomodulin; LRR prote 98.2 1.8E-07 6.1E-12 86.6 -0.6 67 25-91 31-106 (185)
420 4gkh_A Aminoglycoside 3'-phosp 98.2 1.5E-05 5.1E-10 78.4 12.9 134 473-618 32-223 (272)
421 3ovc_A Hygromycin-B 4-O-kinase 98.1 8.9E-06 3E-10 83.7 10.7 142 470-619 46-244 (362)
422 1io0_A Tropomodulin; LRR prote 98.1 3.6E-07 1.2E-11 84.5 -0.7 119 49-180 31-164 (185)
423 3ats_A Putative uncharacterize 98.0 1.2E-05 4E-10 82.7 9.2 81 471-551 26-121 (357)
424 2olc_A MTR kinase, methylthior 97.9 5.3E-05 1.8E-09 79.1 11.6 77 470-548 35-120 (397)
425 2q83_A YTAA protein; 2635576, 97.8 7E-05 2.4E-09 76.2 11.2 141 471-618 38-252 (346)
426 3jr1_A Putative fructosamine-3 97.8 0.00015 5.1E-09 72.6 12.6 138 470-614 41-232 (312)
427 2pyw_A Uncharacterized protein 97.7 0.00033 1.1E-08 73.5 13.9 75 470-547 39-122 (420)
428 3f7w_A Putative fructosamine-3 97.5 0.00026 8.9E-09 70.2 9.0 76 469-550 19-97 (288)
429 3csv_A Aminoglycoside phosphot 97.1 0.0015 5.2E-08 66.0 9.5 32 588-619 183-218 (333)
430 1zyl_A Hypothetical protein YI 97.1 0.0056 1.9E-07 61.6 13.6 141 472-618 33-223 (328)
431 2ppq_A HSK, HK, homoserine kin 97.0 0.0014 4.9E-08 65.8 8.1 158 456-618 8-217 (322)
432 3e4g_A ATP synthase subunit S, 97.0 0.0003 1E-08 63.4 2.6 88 54-154 61-150 (176)
433 3rfe_A Platelet glycoprotein I 96.9 0.0014 4.6E-08 56.2 6.1 61 3-66 6-67 (130)
434 3dxq_A Choline/ethanolamine ki 96.7 0.008 2.7E-07 59.7 11.2 71 470-550 23-95 (301)
435 1nw1_A Choline kinase (49.2 KD 96.7 0.0045 1.5E-07 64.9 9.5 72 471-550 79-159 (429)
436 3e4g_A ATP synthase subunit S, 96.7 0.00036 1.2E-08 62.9 0.7 93 21-130 52-150 (176)
437 3rfe_A Platelet glycoprotein I 96.4 0.005 1.7E-07 52.6 6.5 56 123-180 12-68 (130)
438 3feg_A Choline/ethanolamine ki 96.2 0.013 4.4E-07 60.1 9.4 141 471-618 56-254 (379)
439 2qg7_A Ethanolamine kinase PV0 96.2 0.018 6E-07 60.7 10.4 73 471-550 114-188 (458)
440 3c5i_A Choline kinase; choline 96.0 0.011 3.7E-07 60.6 7.6 73 471-550 39-121 (369)
441 3i1a_A Spectinomycin phosphotr 96.0 0.021 7.3E-07 57.7 9.6 31 588-618 206-236 (339)
442 1pgv_A TMD-1, tropomodulin TMD 95.6 0.0022 7.7E-08 58.8 0.3 65 27-91 38-111 (197)
443 1pgv_A TMD-1, tropomodulin TMD 95.3 0.014 4.7E-07 53.5 4.3 60 293-352 69-136 (197)
444 3f2s_A CK, chetk-alpha, cholin 94.2 0.093 3.2E-06 54.0 8.0 144 471-618 58-280 (401)
445 3mes_A Choline kinase; malaria 93.1 0.56 1.9E-05 48.6 11.5 73 471-550 76-157 (424)
446 3cxl_A N-chimerin; SH2, RHO-GA 87.8 0.067 2.3E-06 56.4 -1.4 57 478-534 152-215 (463)
447 3g15_A CK, chetk-alpha, cholin 87.6 1.8 6.1E-05 44.5 9.4 29 590-618 246-280 (401)
448 4ann_A ESSB; membrane protein, 80.1 4.2 0.00014 37.4 7.2 90 520-622 42-132 (215)
449 4ano_A ESSB; membrane protein, 77.5 7.5 0.00026 35.8 8.1 90 520-622 47-137 (219)
450 2lz0_A Uncharacterized protein 43.9 66 0.0022 25.2 6.8 47 16-63 6-52 (100)
451 3ls8_A Phosphatidylinositol 3- 37.6 2.5E+02 0.0087 30.0 12.0 83 527-617 403-501 (614)
452 2x6h_A GH13170P, VPS34, phosph 36.3 2.2E+02 0.0076 31.0 11.5 45 566-617 529-575 (696)
453 2lz0_A Uncharacterized protein 31.9 72 0.0025 24.9 5.2 49 39-88 5-53 (100)
454 1cja_A Protein (actin-fragmin 29.9 1.5E+02 0.0051 29.0 8.0 132 475-618 78-237 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.4e-52 Score=481.05 Aligned_cols=421 Identities=32% Similarity=0.442 Sum_probs=307.8
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCC---------------
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVP--------------- 71 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p--------------- 71 (639)
.+..+++++|++.+.+|. ++++++|++|+|++|.+++.+|..++.+++|++|+|++|++++.+|
T Consensus 201 ~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n 279 (768)
T 3rgz_A 201 NLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAEN 279 (768)
T ss_dssp TCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSS
T ss_pred cCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCC
Confidence 445566666666666665 6666666666666666666666666666666666666666555444
Q ss_pred -------cccCCC-CCCCEEeeecccCccccCccccCCCCCC---------cccCCCC-CcccCCCCccEEEccCCcCcc
Q 046265 72 -------REVGQL-SSLKQLVLYCNGLSGWLPSSFGNLNNLA---------IGSMPNS-LSNLTSLSLFHLDLSENQLSG 133 (639)
Q Consensus 72 -------~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~---------~~~lp~~-~~~l~~L~L~~L~L~~N~l~~ 133 (639)
..+..+ ++|++|+|++|++++.+|..|+++++|+ .+.+|.. +.++++| ++|++++|++++
T Consensus 280 ~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L--~~L~Ls~n~l~~ 357 (768)
T 3rgz_A 280 KFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGL--KVLDLSFNEFSG 357 (768)
T ss_dssp EEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTC--CEEECCSSEEEE
T ss_pred ccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCC--CEEeCcCCccCc
Confidence 444332 4444444444444444444444444443 1133332 4444444 455555555555
Q ss_pred cCCccccCCC-CCCEEeccCCCCCCCCCccccC--CCcccEEEcccCcCCccCCccCcCCCCCCeEEccCC----ccccc
Q 046265 134 SIPHFLGHLS-NLAVLHLGDNSLFGSIPPILGK--VQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSS----LVSAE 206 (639)
Q Consensus 134 ~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~----~~~~~ 206 (639)
.+|..+.+++ +|++|++++|++++.+|..+.. +++|++|++++|.+++.+|..+.++++|+.|+++.+ .+|..
T Consensus 358 ~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 437 (768)
T 3rgz_A 358 ELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSS 437 (768)
T ss_dssp CCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGG
T ss_pred cccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHH
Confidence 5555555444 5555555555555555554444 556777777777777777777777778888888754 34566
Q ss_pred cccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCccccc------------
Q 046265 207 IGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGS------------ 274 (639)
Q Consensus 207 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~------------ 274 (639)
++.+++|+.|++++|.+.+.+|..+..+++|++|++++|.+++.+|..++.+++|++|++++|++.+.
T Consensus 438 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 517 (768)
T 3rgz_A 438 LGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 517 (768)
T ss_dssp GGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCC
T ss_pred HhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCC
Confidence 77788888888888888888888888888888888888888888888888888888888888887752
Q ss_pred -ccCcCCccccccCccccCCCCCCEEeccCCcccccCCccc---------------------------------------
Q 046265 275 -LNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIEL--------------------------------------- 314 (639)
Q Consensus 275 -l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~--------------------------------------- 314 (639)
+++++|++++.+|..++.+++|+.|++++|.+.|.+|..+
T Consensus 518 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (768)
T 3rgz_A 518 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQ 597 (768)
T ss_dssp EEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECT
T ss_pred EEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccc
Confidence 5788888888888888888889999999888887777543
Q ss_pred -------------------------------cCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCCh
Q 046265 315 -------------------------------GNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPV 363 (639)
Q Consensus 315 -------------------------------~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~ 363 (639)
..+++|+.|++++|+++|.+|..++.+++|+.|+|++ |++.+.+|.
T Consensus 598 ~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~---N~l~g~ip~ 674 (768)
T 3rgz_A 598 GIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGH---NDISGSIPD 674 (768)
T ss_dssp TCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCS---SCCCSCCCG
T ss_pred cccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcC---CccCCCCCh
Confidence 3356788999999999999999999999999999999 567788999
Q ss_pred hhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeeeeeecCCCcccccccccccCCCCCCCCc
Q 046265 364 ELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRGLIRNSTGIHYNLVDALQGNKGLCGDV 443 (639)
Q Consensus 364 ~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~g~~p~~~~~~~~~~~~~~~~~~l~g~~ 443 (639)
.+..+++|+.||++.|.+++.+ | ..+..++.|+.+|+|+|+++|.+|...++..+...++.||+++||.+
T Consensus 675 ~l~~L~~L~~LdLs~N~l~g~i-p---------~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 675 EVGDLRGLNILDLSSNKLDGRI-P---------QAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp GGGGCTTCCEEECCSSCCEECC-C---------GGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred HHhCCCCCCEEECCCCcccCcC-C---------hHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC
Confidence 9999999999999999999988 6 77899999999999999999999999999988888999999999975
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1e-48 Score=448.96 Aligned_cols=397 Identities=31% Similarity=0.442 Sum_probs=287.8
Q ss_pred eeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEee
Q 046265 6 FFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVL 85 (639)
Q Consensus 6 ~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 85 (639)
..+..+++++|++.+.+|. ..+++|++|+|++|.+++.+|. ++.+++|++|+|++|++++.+|..++++++|++|++
T Consensus 178 ~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L 254 (768)
T 3rgz_A 178 GELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI 254 (768)
T ss_dssp TTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEEC
T ss_pred CCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEEC
Confidence 4567889999999987775 8899999999999999988887 999999999999999999999999999999999999
Q ss_pred ecccCccccCccccCCCCCC---------cccCCCCCccc-CCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCC
Q 046265 86 YCNGLSGWLPSSFGNLNNLA---------IGSMPNSLSNL-TSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSL 155 (639)
Q Consensus 86 ~~N~l~~~~p~~~~~l~~L~---------~~~lp~~~~~l-~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 155 (639)
++|++++.+|.. .+++|+ .+.+|..+..+ ++| ++|+|++|++++.+|..|+++++|++|+|++|++
T Consensus 255 s~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L--~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l 330 (768)
T 3rgz_A 255 SSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTL--TGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF 330 (768)
T ss_dssp CSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTC--SEEECCSSEEEECCCGGGGGCTTCCEEECCSSEE
T ss_pred CCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcC--CEEECcCCcCCCccchHHhcCCCccEEECCCCcc
Confidence 999998877764 555554 23566666554 555 5777777777767777777777777777777777
Q ss_pred CCCCCcc-ccCCCcccEEEcccCcCCccCCccCcCCC-CCCeEEc--------------------------cCC----cc
Q 046265 156 FGSIPPI-LGKVQSLLSLGFDLNLLNGVLPPSISNLS-NLEGLYL--------------------------YSS----LV 203 (639)
Q Consensus 156 ~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~L~l--------------------------~~~----~~ 203 (639)
+|.+|.. ++.+++|++|++++|.+++.+|..+..++ +|+.|++ +.+ .+
T Consensus 331 ~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 410 (768)
T 3rgz_A 331 SGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI 410 (768)
T ss_dssp EEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEEC
T ss_pred cCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCcccccc
Confidence 6666654 66666666666666666666665555544 4555544 433 23
Q ss_pred ccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCcccc----------
Q 046265 204 SAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYG---------- 273 (639)
Q Consensus 204 ~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---------- 273 (639)
|..+..+++|+.|++++|++.+.+|..+..+++|+.|++++|.+++.+|..+..+++|++|++++|++.+
T Consensus 411 p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 490 (768)
T 3rgz_A 411 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT 490 (768)
T ss_dssp CGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT
T ss_pred CHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCC
Confidence 4455666666666666666666666666666677777777777766666666666777777777776654
Q ss_pred ---cccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCc------------
Q 046265 274 ---SLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVL------------ 338 (639)
Q Consensus 274 ---~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~------------ 338 (639)
.+++++|++++.+|.+++.+++|+.|++++|++.+.+|..+..+++|+.|++++|++.|.+|..+
T Consensus 491 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~ 570 (768)
T 3rgz_A 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFI 570 (768)
T ss_dssp TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTT
T ss_pred CCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcc
Confidence 24667777777777777777777777777777777777777777777777777777666655433
Q ss_pred ----------------------------------------------------------cCCCCCCEEeCCCCCCCccccc
Q 046265 339 ----------------------------------------------------------GSISDLEYLDLSTNYNNEFRKE 360 (639)
Q Consensus 339 ----------------------------------------------------------~~l~~L~~L~Ls~N~~~~~~~~ 360 (639)
+.+++|+.|||++ |++.+.
T Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~---N~l~g~ 647 (768)
T 3rgz_A 571 AGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSY---NMLSGY 647 (768)
T ss_dssp CSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCS---SCCBSC
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcC---Cccccc
Confidence 2245567777776 455667
Q ss_pred CChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeeeeeecCC
Q 046265 361 FPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRGLIRNS 422 (639)
Q Consensus 361 ~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~g~~p~~ 422 (639)
+|.++..++.|+.|+++.|.+++.+ | ..++.++.|+.||+|+|+++|.+|..
T Consensus 648 ip~~l~~l~~L~~L~Ls~N~l~g~i-p---------~~l~~L~~L~~LdLs~N~l~g~ip~~ 699 (768)
T 3rgz_A 648 IPKEIGSMPYLFILNLGHNDISGSI-P---------DEVGDLRGLNILDLSSNKLDGRIPQA 699 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCSCC-C---------GGGGGCTTCCEEECCSSCCEECCCGG
T ss_pred CCHHHhccccCCEEeCcCCccCCCC-C---------hHHhCCCCCCEEECCCCcccCcCChH
Confidence 7777777777777888877777766 5 66788888888888888888888753
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.2e-45 Score=410.62 Aligned_cols=379 Identities=19% Similarity=0.261 Sum_probs=262.7
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCC---------------------------------------------
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQ--------------------------------------------- 41 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~--------------------------------------------- 41 (639)
....++++++++.|.+|++|+++++|++|+|++|.
T Consensus 82 ~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~ 161 (636)
T 4eco_A 82 RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDL 161 (636)
T ss_dssp CEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHH
T ss_pred CEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHH
Confidence 67889999999999999999999999999999883
Q ss_pred ---------------------------------CccCCCCCCCCCCCCCEEEcccCcCCCC-----------------CC
Q 046265 42 ---------------------------------LSGVIPQEIDPLTHLKHLYINVNKLRGS-----------------VP 71 (639)
Q Consensus 42 ---------------------------------l~~~~p~~~~~L~~L~~L~L~~N~l~~~-----------------~p 71 (639)
++| +|.+|+++++|++|+|++|++++. +|
T Consensus 162 ~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip 240 (636)
T 4eco_A 162 IKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKT 240 (636)
T ss_dssp HHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCc
Confidence 445 788899999999999999999986 99
Q ss_pred cccC--CCCCCCEEeeecccCccccCccccCCCCCCcc-----------cCCCCCccc------CCCCccEEEccCCcCc
Q 046265 72 REVG--QLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIG-----------SMPNSLSNL------TSLSLFHLDLSENQLS 132 (639)
Q Consensus 72 ~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~-----------~lp~~~~~l------~~L~L~~L~L~~N~l~ 132 (639)
..++ ++++|++|+|++|++.+.+|..|+++++|+.. .+|..+.++ ++| ++|++++|+++
T Consensus 241 ~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L--~~L~L~~n~l~ 318 (636)
T 4eco_A 241 EDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKI--QIIYIGYNNLK 318 (636)
T ss_dssp SCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTC--CEEECCSSCCS
T ss_pred hhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCC--CEEECCCCcCC
Confidence 9999 99999999999999999999999988876611 233333333 444 45555555555
Q ss_pred ccCCc--cccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCC-CCeEEccCCc---cccc
Q 046265 133 GSIPH--FLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSN-LEGLYLYSSL---VSAE 206 (639)
Q Consensus 133 ~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~l~~~~---~~~~ 206 (639)
.+|. .++++++|++|++++|+++|.+| .++.+++|+.|++++|.++ .+|..+..+++ |+.|+++.+. +|..
T Consensus 319 -~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~ 395 (636)
T 4eco_A 319 -TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIPNI 395 (636)
T ss_dssp -SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCCSC
T ss_pred -ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccchh
Confidence 5555 55555555555555555555555 5555555555555555555 45555555555 5555555433 2333
Q ss_pred ccccc--CCcEEEcCCcccCCCCCcccc-------CCCCCceeccccccccCcchhhhhcCCCccEEeccCCcccccccC
Q 046265 207 IGNLL--QLIELEIDNKQLFGQIPKSLR-------NFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNF 277 (639)
Q Consensus 207 ~~~l~--~L~~L~l~~n~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~l 277 (639)
+..+. +|+.|++++|.+.+.+|..+. .+++|+.|++++|.+++.++..+..+++|++|++++|++
T Consensus 396 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l------ 469 (636)
T 4eco_A 396 FDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNML------ 469 (636)
T ss_dssp CCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCC------
T ss_pred hhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCC------
Confidence 33322 555555555555555555555 455555556665555544444445555555555555544
Q ss_pred cCCccccccCccccC--------CCCCCEEeccCCcccccCCcccc--CCCCCCeeeccCccCcccCCcCccCCCCCCEE
Q 046265 278 SMNNITRSIPPKIGK--------LYQLHKLDFSLNHIVGELPIELG--NLKSLNYRALNGNKVYGSLPRVLGSISDLEYL 347 (639)
Q Consensus 278 s~n~~~~~~p~~~~~--------l~~L~~L~Ls~N~~~~~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 347 (639)
+ .+|..+.. +++|+.|++++|+++ .+|..+. .+++|+.|++++|++++ +|..++.+++|+.|
T Consensus 470 -----~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L 541 (636)
T 4eco_A 470 -----T-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGF 541 (636)
T ss_dssp -----S-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEE
T ss_pred -----C-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEE
Confidence 3 44443322 337888888888887 6777776 88888888888888886 78888888888888
Q ss_pred eCCCCC---CCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeeeee
Q 046265 348 DLSTNY---NNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRGL 418 (639)
Q Consensus 348 ~Ls~N~---~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~g~ 418 (639)
++++|+ .|.+.+.+|..+..+++|+.|++++|.+ +.+ | ..+. ++|+.||+++|++...
T Consensus 542 ~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~i-p---------~~~~--~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 542 GIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKV-N---------EKIT--PNISVLDIKDNPNISI 602 (636)
T ss_dssp ECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBC-C---------SCCC--TTCCEEECCSCTTCEE
T ss_pred ECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-Ccc-C---------HhHh--CcCCEEECcCCCCccc
Confidence 887654 3667777888888888888888888888 445 4 2222 5788888888877643
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.1e-43 Score=393.95 Aligned_cols=401 Identities=20% Similarity=0.167 Sum_probs=257.0
Q ss_pred eEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeec
Q 046265 8 FFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYC 87 (639)
Q Consensus 8 ~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 87 (639)
...+++++|++.+..|..|.++++|++|+|++|.+++..|.+|+.+++|++|+|++|++++..|..|+++++|++|++++
T Consensus 35 l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 114 (606)
T 3t6q_A 35 TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQ 114 (606)
T ss_dssp CCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTT
T ss_pred CcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccc
Confidence 45667777777777777777777788888887777777777777777888888877777766777777777788888877
Q ss_pred ccCccccCccccCCCCCCc--------ccCC-CCCcccCCCCccEEEccCCcCcccCCccccCCCCCC--EEeccCCCCC
Q 046265 88 NGLSGWLPSSFGNLNNLAI--------GSMP-NSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLA--VLHLGDNSLF 156 (639)
Q Consensus 88 N~l~~~~p~~~~~l~~L~~--------~~lp-~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~--~L~L~~N~l~ 156 (639)
|++++..|..|+++++|+. ..++ ..+..+++| ++|++++|.+++..|..++.+++|+ .|++++|.++
T Consensus 115 n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 115 TGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKL--KVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp SCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTC--CEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cCcccCCcchhccCCcccEEECCCCcccccCcccccCCccc--CEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 7777766777777777652 1221 222235555 6777777777766666677777777 6777777776
Q ss_pred CCCCccccCC---------------------------------------------------CcccEEEcccCcCCccCCc
Q 046265 157 GSIPPILGKV---------------------------------------------------QSLLSLGFDLNLLNGVLPP 185 (639)
Q Consensus 157 ~~~p~~~~~l---------------------------------------------------~~L~~L~l~~N~l~~~~p~ 185 (639)
+..|..+... .+|+.|++++|.+++..+.
T Consensus 193 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~ 272 (606)
T 3t6q_A 193 GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN 272 (606)
T ss_dssp EECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT
T ss_pred ccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH
Confidence 6555443321 0456666666666666666
Q ss_pred cCcCCCCCCeEEccCCc---cccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcch-hhhhcCCCc
Q 046265 186 SISNLSNLEGLYLYSSL---VSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIY-EVFGIYPNL 261 (639)
Q Consensus 186 ~~~~l~~L~~L~l~~~~---~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L 261 (639)
.|..+++|+.|+++.+. +|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+.++ ..+..+++|
T Consensus 273 ~~~~l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L 352 (606)
T 3t6q_A 273 TFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENL 352 (606)
T ss_dssp TTTTCTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTC
T ss_pred HhccccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcC
Confidence 66667777777776543 34556666677777777777666666666667777777777776664443 336666777
Q ss_pred cEEeccCCcccc---------------cccCcCCccccccCccccCCCCCCEEeccCCcccccCCcc-ccCCCCCCeeec
Q 046265 262 TFLDLSQNNFYG---------------SLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIE-LGNLKSLNYRAL 325 (639)
Q Consensus 262 ~~L~Ls~N~l~~---------------~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~-~~~l~~L~~L~l 325 (639)
++|++++|.+.+ .+++++|.+++..|..+..+++|+.|++++|.+.+..|.. +..+++|+.|++
T Consensus 353 ~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 432 (606)
T 3t6q_A 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNL 432 (606)
T ss_dssp CEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEEC
T ss_pred CEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEEC
Confidence 777777666543 1455666666555666666666666666666666554433 566666666666
Q ss_pred cCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccC
Q 046265 326 NGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGL 405 (639)
Q Consensus 326 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L 405 (639)
++|.+.+..|..++.+++|+.|++++|++.......+..+..+++|+.|++++|.+.+.. | ..+..++.|
T Consensus 433 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~---------~~~~~l~~L 502 (606)
T 3t6q_A 433 SHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSID-Q---------HAFTSLKMM 502 (606)
T ss_dssp TTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEEC-T---------TTTTTCTTC
T ss_pred CCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccC-h---------hhhccccCC
Confidence 666666666666666666666666664433221122345566666666666666665543 3 345566666
Q ss_pred cEEccCCCeeeeeec
Q 046265 406 SCIDISYNELRGLIR 420 (639)
Q Consensus 406 ~~ldls~N~l~g~~p 420 (639)
+.||+++|++++..|
T Consensus 503 ~~L~Ls~N~l~~~~~ 517 (606)
T 3t6q_A 503 NHVDLSHNRLTSSSI 517 (606)
T ss_dssp CEEECCSSCCCGGGG
T ss_pred CEEECCCCccCcCCh
Confidence 666666666665544
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.2e-42 Score=389.10 Aligned_cols=401 Identities=17% Similarity=0.173 Sum_probs=273.2
Q ss_pred eeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEee
Q 046265 6 FFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVL 85 (639)
Q Consensus 6 ~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 85 (639)
-.+..+++++|++.+..|..|.++++|++|+|++|.+++..|..|+.+++|++|++++|++++..|..++++++|++|++
T Consensus 57 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L 136 (606)
T 3t6q_A 57 INLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYL 136 (606)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEEC
T ss_pred ccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEEC
Confidence 34667889999999888999999999999999999998888888999999999999999988655777888889999999
Q ss_pred ecccCccccCccccCCCCCCcccC---------CCCCcccCCCCccEEEccCCcCcccCCccccCC--------------
Q 046265 86 YCNGLSGWLPSSFGNLNNLAIGSM---------PNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHL-------------- 142 (639)
Q Consensus 86 ~~N~l~~~~p~~~~~l~~L~~~~l---------p~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l-------------- 142 (639)
++|++++..++.+..+++|+...+ |..+..+++|....|++++|.+++..|..+...
T Consensus 137 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~ 216 (606)
T 3t6q_A 137 GSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLL 216 (606)
T ss_dssp CSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHH
T ss_pred CCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHH
Confidence 988888755455555777762211 233445555522256777776665555443221
Q ss_pred -------------------------------------CCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCc
Q 046265 143 -------------------------------------SNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPP 185 (639)
Q Consensus 143 -------------------------------------~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 185 (639)
.+|+.|++++|.+++..+..|+.+++|++|++++|.++ .+|.
T Consensus 217 ~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~ 295 (606)
T 3t6q_A 217 VIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPS 295 (606)
T ss_dssp HHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCS
T ss_pred HHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCCh
Confidence 04556666666666555555666666666666666666 5566
Q ss_pred cCcCCCCCCeEEccCCcc----ccccccccCCcEEEcCCcccCCCCCc-cccCCCCCceeccccccccCcc--hhhhhcC
Q 046265 186 SISNLSNLEGLYLYSSLV----SAEIGNLLQLIELEIDNKQLFGQIPK-SLRNFTSLNIVHLEQNHLTGNI--YEVFGIY 258 (639)
Q Consensus 186 ~~~~l~~L~~L~l~~~~~----~~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l 258 (639)
.+..+++|+.|+++.+.+ +..+..+++|+.|++++|.+.+.+|. .+..+++|++|++++|.+++.. +..+..+
T Consensus 296 ~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l 375 (606)
T 3t6q_A 296 GLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNL 375 (606)
T ss_dssp SCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTC
T ss_pred hhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccC
Confidence 666666666666665433 33455666666666666666655543 3566666666666666666554 4556666
Q ss_pred CCccEEeccCCcccc-------------cccCcCCccccccCcc-ccCCCCCCEEeccCCcccccCCccccCCCCCCeee
Q 046265 259 PNLTFLDLSQNNFYG-------------SLNFSMNNITRSIPPK-IGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRA 324 (639)
Q Consensus 259 ~~L~~L~Ls~N~l~~-------------~l~ls~n~~~~~~p~~-~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~ 324 (639)
++|++|++++|.+.+ .+++++|.+++..|.. +..+++|+.|++++|.+.+..|..+..+++|+.|+
T Consensus 376 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 455 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLN 455 (606)
T ss_dssp TTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEE
Confidence 666666666666542 2456666666655543 67777788888888877777777777777888888
Q ss_pred ccCccCccc---CCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhh
Q 046265 325 LNGNKVYGS---LPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISR 401 (639)
Q Consensus 325 l~~N~l~~~---~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~ 401 (639)
+++|++.+. .+..+..+++|+.|++++|+ +.+..|..+..+++|+.|++++|.+.+.. | ..+..
T Consensus 456 L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~---l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~---------~~l~~ 522 (606)
T 3t6q_A 456 LQGNHFPKGNIQKTNSLQTLGRLEILVLSFCD---LSSIDQHAFTSLKMMNHVDLSHNRLTSSS-I---------EALSH 522 (606)
T ss_dssp CTTCBCGGGEECSSCGGGGCTTCCEEECTTSC---CCEECTTTTTTCTTCCEEECCSSCCCGGG-G---------GGGTT
T ss_pred CCCCCCCccccccchhhccCCCccEEECCCCc---cCccChhhhccccCCCEEECCCCccCcCC-h---------hHhCc
Confidence 888877652 23456777778888887743 44445667777777888888777776544 3 45667
Q ss_pred cccCcEEccCCCeeeeeecC
Q 046265 402 MHGLSCIDISYNELRGLIRN 421 (639)
Q Consensus 402 l~~L~~ldls~N~l~g~~p~ 421 (639)
++.| .+|+++|++++.+|.
T Consensus 523 l~~L-~L~L~~N~l~~~~~~ 541 (606)
T 3t6q_A 523 LKGI-YLNLASNHISIILPS 541 (606)
T ss_dssp CCSC-EEECCSSCCCCCCGG
T ss_pred cccc-EEECcCCcccccCHh
Confidence 7777 777788777766653
No 6
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.5e-43 Score=400.04 Aligned_cols=382 Identities=18% Similarity=0.206 Sum_probs=303.0
Q ss_pred eeeEEEEeCCCcccccCCccccCCCCCCEEEC-cCCCCccC---------------------------------------
Q 046265 6 FFFFQVVHESNTLFAIIPPQIGNISNLKFLDM-GNNQLSGV--------------------------------------- 45 (639)
Q Consensus 6 ~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~L-s~n~l~~~--------------------------------------- 45 (639)
-....++++++++.|.+|++|++|++|++|+| ++|.++|.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46788999999999999999999999999999 77765444
Q ss_pred -------------------------------------CCCCCCCCCCCCEEEcccCcCCC-----------------CCC
Q 046265 46 -------------------------------------IPQEIDPLTHLKHLYINVNKLRG-----------------SVP 71 (639)
Q Consensus 46 -------------------------------------~p~~~~~L~~L~~L~L~~N~l~~-----------------~~p 71 (639)
+|.+|++|++|++|+|++|++++ .+|
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP 482 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN 482 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCC
Confidence 78889999999999999999998 399
Q ss_pred cccC--CCCCCCEEeeecccCccccCccccCCCCCCcc-----------cCCCCCcccC-------CCCccEEEccCCcC
Q 046265 72 REVG--QLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIG-----------SMPNSLSNLT-------SLSLFHLDLSENQL 131 (639)
Q Consensus 72 ~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~-----------~lp~~~~~l~-------~L~L~~L~L~~N~l 131 (639)
..++ ++++|++|+|++|++.+.+|..|+++++|+.. .+|..+.+++ +| ++|+|++|++
T Consensus 483 ~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L--~~L~Ls~N~L 560 (876)
T 4ecn_A 483 EELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKI--QIFYMGYNNL 560 (876)
T ss_dssp SCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTC--CEEECCSSCC
T ss_pred hhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCc--cEEEeeCCcC
Confidence 9988 99999999999999999999999999888722 2444444443 55 6888888888
Q ss_pred cccCCc--cccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCC-CCeEEccCCcc---cc
Q 046265 132 SGSIPH--FLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSN-LEGLYLYSSLV---SA 205 (639)
Q Consensus 132 ~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~l~~~~~---~~ 205 (639)
+ .+|. .++++++|++|+|++|+++ .+| .|+.+++|+.|++++|.++ .+|..+..+++ |+.|+++.+.+ |.
T Consensus 561 ~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp~ 636 (876)
T 4ecn_A 561 E-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIPN 636 (876)
T ss_dssp C-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSCCS
T ss_pred C-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcCch
Confidence 7 7777 7888888888888888887 677 7788888888888888887 77777888887 88888876543 44
Q ss_pred cccccc--CCcEEEcCCcccCCCCCccc---c--CCCCCceeccccccccCcchhhhhcCCCccEEeccCCcccccccCc
Q 046265 206 EIGNLL--QLIELEIDNKQLFGQIPKSL---R--NFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFS 278 (639)
Q Consensus 206 ~~~~l~--~L~~L~l~~n~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls 278 (639)
.+..+. +|+.|++++|++.+.+|... . .+++|+.|++++|.++..++..+..+++|+.|+|++|++.
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~------ 710 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT------ 710 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS------
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC------
Confidence 444443 38888888888877665322 2 3347888888888888655555667788888887777663
Q ss_pred CCccccccCcccc--------CCCCCCEEeccCCcccccCCcccc--CCCCCCeeeccCccCcccCCcCccCCCCCCEEe
Q 046265 279 MNNITRSIPPKIG--------KLYQLHKLDFSLNHIVGELPIELG--NLKSLNYRALNGNKVYGSLPRVLGSISDLEYLD 348 (639)
Q Consensus 279 ~n~~~~~~p~~~~--------~l~~L~~L~Ls~N~~~~~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 348 (639)
.+|..+. ++++|+.|+|++|++. .+|..+. .+++|+.|+|++|++++ +|..++.+++|+.|+
T Consensus 711 ------~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~ 782 (876)
T 4ecn_A 711 ------SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFG 782 (876)
T ss_dssp ------CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEE
T ss_pred ------ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEE
Confidence 4554433 3348999999999998 7888887 89999999999999997 788899999999999
Q ss_pred CCCCC---CCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeeeeeec
Q 046265 349 LSTNY---NNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRGLIR 420 (639)
Q Consensus 349 Ls~N~---~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~g~~p 420 (639)
|++|+ .|.+.+.+|..+..+++|+.|++++|.+ +.+ | ..+. ++|+.||+++|++....+
T Consensus 783 Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~I-p---------~~l~--~~L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 783 IRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKV-D---------EKLT--PQLYILDIADNPNISIDV 844 (876)
T ss_dssp CCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBC-C---------SCCC--SSSCEEECCSCTTCEEEC
T ss_pred CCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-Ccc-C---------Hhhc--CCCCEEECCCCCCCccCh
Confidence 98864 3667788899999999999999999998 556 4 2222 589999999999876544
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1e-41 Score=381.67 Aligned_cols=413 Identities=23% Similarity=0.219 Sum_probs=254.3
Q ss_pred EEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecc
Q 046265 9 FQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCN 88 (639)
Q Consensus 9 ~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 88 (639)
..+++++|++.+..|..|.++++|++|+|++|.+++..|.+|+++++|++|+|++|++++..|..|+++++|++|++++|
T Consensus 35 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 114 (606)
T 3vq2_A 35 KNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVET 114 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTS
T ss_pred CEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCC
Confidence 44555555555555555556666666666666655555555566666666666666655544555666666666666666
Q ss_pred cCccccCccccCCCCCC--------cc--cCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCC----EEeccCCC
Q 046265 89 GLSGWLPSSFGNLNNLA--------IG--SMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLA----VLHLGDNS 154 (639)
Q Consensus 89 ~l~~~~p~~~~~l~~L~--------~~--~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~L~~N~ 154 (639)
++++..|..|+++++|+ +. .+|..+.++++| ++|++++|++++..|..++.+++|+ +|++++|.
T Consensus 115 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L--~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~ 192 (606)
T 3vq2_A 115 KLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNL--VHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNP 192 (606)
T ss_dssp CCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTC--CEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCC
T ss_pred ccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCC--CEEEccCCcceecChhhhhhhhccccccceeeccCCC
Confidence 65555555555555554 11 234445555544 4555555555544444444333332 44444444
Q ss_pred CCCCCCccccCCCcccEEEcccCcCC------------------------------------------------------
Q 046265 155 LFGSIPPILGKVQSLLSLGFDLNLLN------------------------------------------------------ 180 (639)
Q Consensus 155 l~~~~p~~~~~l~~L~~L~l~~N~l~------------------------------------------------------ 180 (639)
+++..+..+... +|+.|++++|.++
T Consensus 193 l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 271 (606)
T 3vq2_A 193 IDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYT 271 (606)
T ss_dssp CCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCC
T ss_pred cceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecccc
Confidence 443322222222 4455555444332
Q ss_pred ----ccCCccCcCCCCCCeEEccCCcc---ccccccccCCcEEEcCCcccCCCCCc--------------------cccC
Q 046265 181 ----GVLPPSISNLSNLEGLYLYSSLV---SAEIGNLLQLIELEIDNKQLFGQIPK--------------------SLRN 233 (639)
Q Consensus 181 ----~~~p~~~~~l~~L~~L~l~~~~~---~~~~~~l~~L~~L~l~~n~l~~~~p~--------------------~~~~ 233 (639)
+.+|. +..+++|+.|+++.+.+ + .+..+++|+.|++++|.+ +.+|. .+..
T Consensus 272 ~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~-~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~ 348 (606)
T 3vq2_A 272 NDFSDDIVK-FHCLANVSAMSLAGVSIKYLE-DVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVA 348 (606)
T ss_dssp TTCCGGGGS-CGGGTTCSEEEEESCCCCCCC-CCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCC
T ss_pred ccccccccc-cccCCCCCEEEecCccchhhh-hccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhcc
Confidence 11111 22333334443332211 1 334444555555555555 44442 3445
Q ss_pred CCCCceeccccccccCcc--hhhhhcCCCccEEeccCCcccc------------cccCcCCccccccC-ccccCCCCCCE
Q 046265 234 FTSLNIVHLEQNHLTGNI--YEVFGIYPNLTFLDLSQNNFYG------------SLNFSMNNITRSIP-PKIGKLYQLHK 298 (639)
Q Consensus 234 l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~------------~l~ls~n~~~~~~p-~~~~~l~~L~~ 298 (639)
+++|++|++++|.+++.. +..+..+++|++|++++|.+.+ .+++++|++.+..| ..+..+++|+.
T Consensus 349 l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 349 LPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp CTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 677777777777777653 6777888888888888887653 36788888887777 67888889999
Q ss_pred EeccCCcccccCCccccCCCCCCeeeccCccCcc-cCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeecc
Q 046265 299 LDFSLNHIVGELPIELGNLKSLNYRALNGNKVYG-SLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLV 377 (639)
Q Consensus 299 L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~ 377 (639)
|++++|.+.+..|..+..+++|+.|++++|.+.+ .+|..++.+++|+.|++++| ++.+..|..+..+++|+.|+++
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n---~l~~~~~~~~~~l~~L~~L~Ls 505 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKC---QLEQISWGVFDTLHRLQLLNMS 505 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS---CCCEECTTTTTTCTTCCEEECC
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCC---cCCccChhhhcccccCCEEECC
Confidence 9999999888888888889999999999999887 47888888999999999985 4455567788888999999999
Q ss_pred CCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeeeeeecCC-Ccccc-cccccccCCCCCCC
Q 046265 378 ITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRGLIRNS-TGIHY-NLVDALQGNKGLCG 441 (639)
Q Consensus 378 ~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~g~~p~~-~~~~~-~~~~~~~~~~~l~g 441 (639)
+|.+.+.. | ..+..+++|+.||+++|+++. +|.. ..+.. .....+.+|+-.|.
T Consensus 506 ~N~l~~~~-~---------~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 506 HNNLLFLD-S---------SHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp SSCCSCEE-G---------GGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCS
T ss_pred CCcCCCcC-H---------HHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccC
Confidence 99888765 4 567888999999999999984 4533 11111 22234556665554
No 8
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.5e-41 Score=381.59 Aligned_cols=240 Identities=23% Similarity=0.192 Sum_probs=146.9
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeee
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLY 86 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 86 (639)
.+..+++++|++.+..|..|+++++|++|+|++|.+++..+..|+.+++|++|+|++|++++..|..|+++++|++|+++
T Consensus 50 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 129 (680)
T 1ziw_A 50 QLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLS 129 (680)
T ss_dssp TCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECC
T ss_pred cCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECC
Confidence 34556666666666666666666666667776666664444456677777777777777665555566677777777777
Q ss_pred cccCccccCccccCCCCCCcccCCC---------CCc--ccCCC------------------------------------
Q 046265 87 CNGLSGWLPSSFGNLNNLAIGSMPN---------SLS--NLTSL------------------------------------ 119 (639)
Q Consensus 87 ~N~l~~~~p~~~~~l~~L~~~~lp~---------~~~--~l~~L------------------------------------ 119 (639)
+|.+++..|..++++++|+.-.+.. .+. .+++|
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~ 209 (680)
T 1ziw_A 130 HNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGP 209 (680)
T ss_dssp SSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHH
T ss_pred CCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccCh
Confidence 7777666666666666665211110 000 11112
Q ss_pred -------------CccEEEccCCcCcccCCccccCCCC--CCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCC
Q 046265 120 -------------SLFHLDLSENQLSGSIPHFLGHLSN--LAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLP 184 (639)
Q Consensus 120 -------------~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 184 (639)
+|++|++++|++++..|.+|..++. |++|+|++|++++..|..|+.+++|++|++++|.+++..|
T Consensus 210 ~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 289 (680)
T 1ziw_A 210 SLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFS 289 (680)
T ss_dssp HHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECT
T ss_pred hhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccCh
Confidence 1234444444444444444544433 7777777777776666667777777777777777777777
Q ss_pred ccCcCCCCCCeEEccCC---------cccc----ccccccCCcEEEcCCcccCCCCCccccCCCCCceecccccc
Q 046265 185 PSISNLSNLEGLYLYSS---------LVSA----EIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNH 246 (639)
Q Consensus 185 ~~~~~l~~L~~L~l~~~---------~~~~----~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 246 (639)
..|..+++|+.|+++.+ .+|. .+..+++|+.|++++|.+.+..|..|.++++|++|++++|.
T Consensus 290 ~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 364 (680)
T 1ziw_A 290 HSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSF 364 (680)
T ss_dssp TTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCB
T ss_pred hhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCc
Confidence 77777777777777532 1222 45667777777777777777666667776666666666554
No 9
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6.4e-41 Score=380.28 Aligned_cols=399 Identities=23% Similarity=0.213 Sum_probs=300.8
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeee
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLY 86 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 86 (639)
....+++++|++.+..|..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|++++..+..|+++++|++|+++
T Consensus 26 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 105 (680)
T 1ziw_A 26 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLM 105 (680)
T ss_dssp TCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECC
T ss_pred CCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECC
Confidence 45678899999988888889999999999999999998888889999999999999999985444579999999999999
Q ss_pred cccCccccCccccCCCCCCc---------ccCCCCCcccCCCCccEEEccCCcCcccCCcccc--CCCCCCEEeccCCCC
Q 046265 87 CNGLSGWLPSSFGNLNNLAI---------GSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLG--HLSNLAVLHLGDNSL 155 (639)
Q Consensus 87 ~N~l~~~~p~~~~~l~~L~~---------~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~N~l 155 (639)
+|++++..|..|+++++|+. +..|..+.++++| ++|++++|++++..+..+. .+++|++|++++|.+
T Consensus 106 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L--~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 106 SNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENL--QELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp SSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTC--CEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCccCccChhHccccCCCCEEECCCCcccccCchhhcccccC--CEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 99999888888998888872 2335567778877 7899999998877666554 457888888888888
Q ss_pred CCCCCccccCC---------------------------CcccEEEcccCcCCccCCccCcCCCC--CCeEEccCCcc---
Q 046265 156 FGSIPPILGKV---------------------------QSLLSLGFDLNLLNGVLPPSISNLSN--LEGLYLYSSLV--- 203 (639)
Q Consensus 156 ~~~~p~~~~~l---------------------------~~L~~L~l~~N~l~~~~p~~~~~l~~--L~~L~l~~~~~--- 203 (639)
++..|..+..+ ++|+.|++++|.+++..|..|..++. |+.|+++.+.+
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 77666554433 23344444444444444444444432 55555443322
Q ss_pred -ccccccccCCcEEEcCCcccCCCCCc---------------------------------cccCCCCCceeccccccccC
Q 046265 204 -SAEIGNLLQLIELEIDNKQLFGQIPK---------------------------------SLRNFTSLNIVHLEQNHLTG 249 (639)
Q Consensus 204 -~~~~~~l~~L~~L~l~~n~l~~~~p~---------------------------------~~~~l~~L~~L~L~~N~l~~ 249 (639)
+..+..+++|+.|++++|.+.+..|. .+..+++|++|++++|.+++
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 22344444444444444444333332 45667788888888888888
Q ss_pred cchhhhhcCCCccEEeccCCcccc-----------------cccCcCCccccccCccccCCCCCCEEeccCCcccccCC-
Q 046265 250 NIYEVFGIYPNLTFLDLSQNNFYG-----------------SLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELP- 311 (639)
Q Consensus 250 ~~~~~~~~l~~L~~L~Ls~N~l~~-----------------~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p- 311 (639)
..+..|..+++|++|++++|.+.+ .+++++|++++..|..+..+++|+.|++++|.+.+.+|
T Consensus 344 ~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 423 (680)
T 1ziw_A 344 IKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTG 423 (680)
T ss_dssp CCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCS
T ss_pred CChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCc
Confidence 888888899999999999886431 35688999998888899999999999999999987665
Q ss_pred ccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchh
Q 046265 312 IELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVI 391 (639)
Q Consensus 312 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~ 391 (639)
..|..+++|+.|++++|++.+..|..+..+++|+.|++++|.+..+ +.+|..+..+++|+.|++++|.+++.. +
T Consensus 424 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~p~~~~~l~~L~~L~Ls~N~l~~i~-~---- 497 (680)
T 1ziw_A 424 QEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNV-DSSPSPFQPLRNLTILDLSNNNIANIN-D---- 497 (680)
T ss_dssp GGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCT-TCSSCTTTTCTTCCEEECCSSCCCCCC-T----
T ss_pred ccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccccccc-ccCCcccccCCCCCEEECCCCCCCcCC-h----
Confidence 6788999999999999999888888888899999999988765433 467888888899999999998887543 3
Q ss_pred hhhhhhhhhhcccCcEEccCCCeeeee
Q 046265 392 WKAWRSLISRMHGLSCIDISYNELRGL 418 (639)
Q Consensus 392 ~~~~~~~~~~l~~L~~ldls~N~l~g~ 418 (639)
..+..+++|+.||+++|++++.
T Consensus 498 -----~~~~~l~~L~~L~Ls~N~l~~~ 519 (680)
T 1ziw_A 498 -----DMLEGLEKLEILDLQHNNLARL 519 (680)
T ss_dssp -----TTTTTCTTCCEEECCSSCCGGG
T ss_pred -----hhhccccccCEEeCCCCCcccc
Confidence 4567788888888888888764
No 10
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.2e-41 Score=379.57 Aligned_cols=346 Identities=20% Similarity=0.255 Sum_probs=303.4
Q ss_pred CCcccccCCccccCCCCCCEEECcCCCCccC-----------------CCCCCC--CCCCCCEEEcccCcCCCCCCcccC
Q 046265 15 SNTLFAIIPPQIGNISNLKFLDMGNNQLSGV-----------------IPQEID--PLTHLKHLYINVNKLRGSVPREVG 75 (639)
Q Consensus 15 ~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~-----------------~p~~~~--~L~~L~~L~L~~N~l~~~~p~~~~ 75 (639)
.|++.+ +|+.|+++++|++|+|++|.+++. +|.+++ ++++|++|+|++|++.+.+|..|+
T Consensus 192 ~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~ 270 (636)
T 4eco_A 192 SNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK 270 (636)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT
T ss_pred cCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHh
Confidence 678888 999999999999999999999986 999999 999999999999999999999999
Q ss_pred CCCCCCEEeeeccc-Ccc-ccCccccCC------CCCC--------cccCCC--CCcccCCCCccEEEccCCcCcccCCc
Q 046265 76 QLSSLKQLVLYCNG-LSG-WLPSSFGNL------NNLA--------IGSMPN--SLSNLTSLSLFHLDLSENQLSGSIPH 137 (639)
Q Consensus 76 ~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~--------~~~lp~--~~~~l~~L~L~~L~L~~N~l~~~~p~ 137 (639)
++++|++|++++|+ +++ .+|..++.+ ++|+ +..+|. .+.++++| ++|++++|+++|.+|
T Consensus 271 ~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L--~~L~L~~N~l~g~ip- 347 (636)
T 4eco_A 271 ALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKL--GMLECLYNQLEGKLP- 347 (636)
T ss_dssp TCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTC--CEEECCSCCCEEECC-
T ss_pred cCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCC--CEEeCcCCcCccchh-
Confidence 99999999999998 998 899988765 6665 457888 88899988 799999999999999
Q ss_pred cccCCCCCCEEeccCCCCCCCCCccccCCCc-ccEEEcccCcCCccCCccCcCCC--CCCeEEccCCcc----ccccc--
Q 046265 138 FLGHLSNLAVLHLGDNSLFGSIPPILGKVQS-LLSLGFDLNLLNGVLPPSISNLS--NLEGLYLYSSLV----SAEIG-- 208 (639)
Q Consensus 138 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~l~--~L~~L~l~~~~~----~~~~~-- 208 (639)
.++.+++|++|+|++|+++ .+|..+..+++ |++|++++|.++ .+|..+..++ +|+.|+++.+.+ |..+.
T Consensus 348 ~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~ 425 (636)
T 4eco_A 348 AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPL 425 (636)
T ss_dssp CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTT
T ss_pred hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhccc
Confidence 8999999999999999998 88999999999 999999999999 7888887765 899999997655 34455
Q ss_pred -----cccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCC-------CccEEeccCCccccccc
Q 046265 209 -----NLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYP-------NLTFLDLSQNNFYGSLN 276 (639)
Q Consensus 209 -----~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-------~L~~L~Ls~N~l~~~l~ 276 (639)
.+++|+.|++++|++....+..+..+++|+.|++++|.++...+..+.... +|+.|++++|++
T Consensus 426 ~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l----- 500 (636)
T 4eco_A 426 DPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKL----- 500 (636)
T ss_dssp CSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCC-----
T ss_pred ccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcC-----
Confidence 677999999999999854444566799999999999999965555554443 899999877776
Q ss_pred CcCCccccccCcccc--CCCCCCEEeccCCcccccCCccccCCCCCCeeec------cCccCcccCCcCccCCCCCCEEe
Q 046265 277 FSMNNITRSIPPKIG--KLYQLHKLDFSLNHIVGELPIELGNLKSLNYRAL------NGNKVYGSLPRVLGSISDLEYLD 348 (639)
Q Consensus 277 ls~n~~~~~~p~~~~--~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l------~~N~l~~~~p~~~~~l~~L~~L~ 348 (639)
+ .+|..+. .+++|+.|++++|++.+ +|..+..+++|+.|++ ++|++.+.+|..++.+++|+.|+
T Consensus 501 ------~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~ 572 (636)
T 4eco_A 501 ------T-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQ 572 (636)
T ss_dssp ------C-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEE
T ss_pred ------C-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEE
Confidence 3 6888887 89999999999999997 8999999999999999 56888999999999999999999
Q ss_pred CCCCCCCcccccCChhhhccccCCeeeccCCcCceee
Q 046265 349 LSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERY 385 (639)
Q Consensus 349 Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~ 385 (639)
|++|++ +.+|..+. ++|+.|++++|.+....
T Consensus 573 Ls~N~l----~~ip~~~~--~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 573 IGSNDI----RKVNEKIT--PNISVLDIKDNPNISID 603 (636)
T ss_dssp CCSSCC----CBCCSCCC--TTCCEEECCSCTTCEEE
T ss_pred CCCCcC----CccCHhHh--CcCCEEECcCCCCcccc
Confidence 999765 45666654 79999999999877533
No 11
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=370.10 Aligned_cols=383 Identities=24% Similarity=0.258 Sum_probs=182.8
Q ss_pred eEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeec
Q 046265 8 FFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYC 87 (639)
Q Consensus 8 ~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 87 (639)
...+++++|++.+..|..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|++++..|..|+++++|++|++++
T Consensus 30 l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 109 (570)
T 2z63_A 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVE 109 (570)
T ss_dssp CCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred ccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccc
Confidence 34455666666655555666666666666666666655555566666666666666666554455566666666666666
Q ss_pred ccCccccCccccCCCCCC--------cc--cCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCC----CEEeccCC
Q 046265 88 NGLSGWLPSSFGNLNNLA--------IG--SMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNL----AVLHLGDN 153 (639)
Q Consensus 88 N~l~~~~p~~~~~l~~L~--------~~--~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L----~~L~L~~N 153 (639)
|++++..+..|+++++|+ +. .+|..+.++++| ++|++++|++++..|..++.+++| +.|++++|
T Consensus 110 n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L--~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 110 TNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNL--EHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp SCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTC--CEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccCCCccccccccccEEecCCCccceecChhhhcccCCC--CEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 666544444455555444 11 134444444444 455555555544444444444444 44444444
Q ss_pred CCCCCCCccccCCCcccEEEcccC--------------------------------------------------------
Q 046265 154 SLFGSIPPILGKVQSLLSLGFDLN-------------------------------------------------------- 177 (639)
Q Consensus 154 ~l~~~~p~~~~~l~~L~~L~l~~N-------------------------------------------------------- 177 (639)
.+.+..|..+... +|+.|++++|
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 4443333333222 3333333332
Q ss_pred --cCCccCCccCcCCCCCCeEEccCCc---cccccccccCCcEEEcCCcccCCCCCcc--------------------cc
Q 046265 178 --LLNGVLPPSISNLSNLEGLYLYSSL---VSAEIGNLLQLIELEIDNKQLFGQIPKS--------------------LR 232 (639)
Q Consensus 178 --~l~~~~p~~~~~l~~L~~L~l~~~~---~~~~~~~l~~L~~L~l~~n~l~~~~p~~--------------------~~ 232 (639)
.+.+..|..+..+++|+.|+++.+. +|..+..+ +|+.|++++|.+. .+|.. ..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~-~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~~~~~~~~~ 344 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNF-GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKGGNAFSEV 344 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCC-CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCBSCCBCCCC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccchhhhhhhccC-CccEEeeccCccc-ccCcccccccCEEeCcCCccccccccc
Confidence 1112223333334444444443221 22233333 4444444444432 22221 02
Q ss_pred CCCCCceeccccccccCcc--hhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccC
Q 046265 233 NFTSLNIVHLEQNHLTGNI--YEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGEL 310 (639)
Q Consensus 233 ~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~ 310 (639)
.+++|+.|++++|.+++.. +..+..+++|++|++ ++|.+++.. ..+..+++|+.|++++|.+.+..
T Consensus 345 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l-----------~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~~ 412 (570)
T 2z63_A 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDL-----------SFNGVITMS-SNFLGLEQLEHLDFQHSNLKQMS 412 (570)
T ss_dssp BCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEEC-----------CSCSEEEEE-EEEETCTTCCEEECTTSEEESCT
T ss_pred cCCCCCEEeCcCCccCccccccccccccCccCEEEC-----------CCCcccccc-ccccccCCCCEEEccCCcccccc
Confidence 3344444444444444332 334444444444444 444444322 22555555555555555555443
Q ss_pred C-ccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCCCCCccc-ccCChhhhccccCCeeeccCCcCceeecCc
Q 046265 311 P-IELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFR-KEFPVELEKLVQLTELDLVITFWEERYRPK 388 (639)
Q Consensus 311 p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~-~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~ 388 (639)
| ..+..+++|+.|++++|.+.+..|..+..+++|+.|++++| .+. +.+|..+..+++|+.|++++|.+.+.. |
T Consensus 413 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n---~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~-~- 487 (570)
T 2z63_A 413 EFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN---SFQENFLPDIFTELRNLTFLDLSQCQLEQLS-P- 487 (570)
T ss_dssp TSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTC---EEGGGEECSCCTTCTTCCEEECTTSCCCEEC-T-
T ss_pred chhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCC---cCccccchhhhhcccCCCEEECCCCccccCC-h-
Confidence 3 34455555555555555555555555555555555555553 222 234455555555555555555554433 2
Q ss_pred chhhhhhhhhhhhcccCcEEccCCCeeeeeec
Q 046265 389 SVIWKAWRSLISRMHGLSCIDISYNELRGLIR 420 (639)
Q Consensus 389 ~~~~~~~~~~~~~l~~L~~ldls~N~l~g~~p 420 (639)
..+..+++|+.|++++|++++..|
T Consensus 488 --------~~~~~l~~L~~L~l~~n~l~~~~~ 511 (570)
T 2z63_A 488 --------TAFNSLSSLQVLNMASNQLKSVPD 511 (570)
T ss_dssp --------TTTTTCTTCCEEECCSSCCSCCCT
T ss_pred --------hhhhcccCCCEEeCCCCcCCCCCH
Confidence 334455555555555555555443
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.7e-40 Score=371.69 Aligned_cols=395 Identities=18% Similarity=0.224 Sum_probs=286.2
Q ss_pred cccee-eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCC
Q 046265 2 SCLAF-FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSL 80 (639)
Q Consensus 2 ~~~~~-~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L 80 (639)
+|.+. ....++.+++++. .+|..+. +++++|+|++|.+++..|..|.++++|++|+|++|++++..|.+|+++++|
T Consensus 6 ~c~~~~~~~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L 82 (606)
T 3vq2_A 6 PCIEVVPNITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHL 82 (606)
T ss_dssp CCEEEETTTEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTC
T ss_pred CceecCCCCceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhc
Confidence 36553 2346777777775 6787765 799999999999998888899999999999999999998888899999999
Q ss_pred CEEeeecccCccccCccccCCCCCCc--------ccCC-CCCcccCCCCccEEEccCCcCcc-cCCccccCCCCCCEEec
Q 046265 81 KQLVLYCNGLSGWLPSSFGNLNNLAI--------GSMP-NSLSNLTSLSLFHLDLSENQLSG-SIPHFLGHLSNLAVLHL 150 (639)
Q Consensus 81 ~~L~L~~N~l~~~~p~~~~~l~~L~~--------~~lp-~~~~~l~~L~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L 150 (639)
++|+|++|++++..|..|+++++|+. ..+| ..+.++++| ++|++++|++++ .+|..++++++|++|+|
T Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~l~~~~lp~~~~~l~~L~~L~L 160 (606)
T 3vq2_A 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITL--KKLNVAHNFIHSCKLPAYFSNLTNLVHVDL 160 (606)
T ss_dssp CEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTC--CEEECCSSCCCCCCCCGGGGTCTTCCEEEC
T ss_pred CEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCC--CEEeCCCCcccceechHhHhhcCCCCEEEc
Confidence 99999999999988999999999872 2333 567888877 799999999875 57899999999999999
Q ss_pred cCCCCCCCCCccccCCCccc----EEEcccCcCCccCCccCcCCCCCCeEEccCCccc----------------------
Q 046265 151 GDNSLFGSIPPILGKVQSLL----SLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVS---------------------- 204 (639)
Q Consensus 151 ~~N~l~~~~p~~~~~l~~L~----~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~---------------------- 204 (639)
++|++++..|..++.+++|+ .|++++|.+++..+..+... +|+.|+++.+.+.
T Consensus 161 s~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~ 239 (606)
T 3vq2_A 161 SYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILG 239 (606)
T ss_dssp CSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEE
T ss_pred cCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhcccccccccccccc
Confidence 99999988888888777665 79999999987766666544 7888888755321
Q ss_pred ---------------------------------------cccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccc
Q 046265 205 ---------------------------------------AEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQN 245 (639)
Q Consensus 205 ---------------------------------------~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N 245 (639)
..+..+++|+.|++++|.+. .+| ++..+++|+.|++++|
T Consensus 240 ~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n 317 (606)
T 3vq2_A 240 EFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRC 317 (606)
T ss_dssp CCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESC
T ss_pred ccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccch-hhh-hccccccCCEEEcccc
Confidence 01445678889999999884 466 7888999999999999
Q ss_pred cccCcchhhhhcCCCccEEeccCCcccc-----------cccCcCCccccc--cCccccCCCCCCEEeccCCcccccCCc
Q 046265 246 HLTGNIYEVFGIYPNLTFLDLSQNNFYG-----------SLNFSMNNITRS--IPPKIGKLYQLHKLDFSLNHIVGELPI 312 (639)
Q Consensus 246 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-----------~l~ls~n~~~~~--~p~~~~~l~~L~~L~Ls~N~~~~~~p~ 312 (639)
.+ +.+|. + .+++|+.|++++|...+ .+++++|.+++. +|..+..+++|+.|++++|.+.+ +|.
T Consensus 318 ~l-~~lp~-~-~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~ 393 (606)
T 3vq2_A 318 QL-KQFPT-L-DLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSA 393 (606)
T ss_dssp CC-SSCCC-C-CCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECC
T ss_pred cC-ccccc-C-CCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chh
Confidence 99 45553 3 67777777777774322 356666666654 35556666666666666666553 445
Q ss_pred cccCCCCCCeeeccCccCcccCC-cCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchh
Q 046265 313 ELGNLKSLNYRALNGNKVYGSLP-RVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVI 391 (639)
Q Consensus 313 ~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~ 391 (639)
.+..+++|+.|++++|++.+..| ..+..+++|+.|++++| .+.+..|..+..+++|+.|++++|.+.+...|
T Consensus 394 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n---~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~---- 466 (606)
T 3vq2_A 394 NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYT---NTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLS---- 466 (606)
T ss_dssp CCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTS---CCEECCTTTTTTCTTCCEEECTTCEEGGGEEC----
T ss_pred hccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCC---CCCccchhhhcCCCCCCEEECCCCcCCCcchH----
Confidence 56666666666666666665555 45566666666666663 33444455555666666666666655542213
Q ss_pred hhhhhhhhhhcccCcEEccCCCeeeeeec
Q 046265 392 WKAWRSLISRMHGLSCIDISYNELRGLIR 420 (639)
Q Consensus 392 ~~~~~~~~~~l~~L~~ldls~N~l~g~~p 420 (639)
..+..+++|+.||+++|++++.+|
T Consensus 467 -----~~~~~l~~L~~L~Ls~n~l~~~~~ 490 (606)
T 3vq2_A 467 -----NVFANTTNLTFLDLSKCQLEQISW 490 (606)
T ss_dssp -----SCCTTCTTCCEEECTTSCCCEECT
T ss_pred -----HhhccCCCCCEEECCCCcCCccCh
Confidence 334455555555555555555444
No 13
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=390.43 Aligned_cols=398 Identities=21% Similarity=0.204 Sum_probs=276.7
Q ss_pred eeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCC-CCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEe
Q 046265 6 FFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVI-PQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLV 84 (639)
Q Consensus 6 ~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 84 (639)
-....+++++|++.+..|..|.++++|++|+|++|...+.+ |.+|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 34567778888888777777777777777777777554444 66777777777777777777766677777777777777
Q ss_pred eecccCccccCcc--ccCCCCCC--------cccC--CCCCcccCCCCccEEEccCCcCcccCCccccCC--CC------
Q 046265 85 LYCNGLSGWLPSS--FGNLNNLA--------IGSM--PNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHL--SN------ 144 (639)
Q Consensus 85 L~~N~l~~~~p~~--~~~l~~L~--------~~~l--p~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l--~~------ 144 (639)
|++|.+++.+|.. |.++++|+ +..+ +..+.++++| ++|+|++|.+++..|..+..+ ++
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L--~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L 181 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSL--KSIDFSSNQIFLVCEHELEPLQGKTLSFFSL 181 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSC--CEEEEESSCCCCCCSGGGHHHHHCSSCCCEE
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCC--CEEECCCCcCCeeCHHHcccccCCccceEEC
Confidence 7777777655554 66777665 1121 2346666666 567777776665555554433 23
Q ss_pred ------------------------CCEEeccCCCCCCCCCccccC-----------------------------------
Q 046265 145 ------------------------LAVLHLGDNSLFGSIPPILGK----------------------------------- 165 (639)
Q Consensus 145 ------------------------L~~L~L~~N~l~~~~p~~~~~----------------------------------- 165 (639)
|++|++++|.+++..|..+..
T Consensus 182 ~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~ 261 (844)
T 3j0a_A 182 AANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFA 261 (844)
T ss_dssp CCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTT
T ss_pred CCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhh
Confidence 566666666555544443321
Q ss_pred ---CCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCcc----ccccccccCCcEEEcCCcccCCCCCccccCCCCCc
Q 046265 166 ---VQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLV----SAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLN 238 (639)
Q Consensus 166 ---l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~----~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 238 (639)
.++|+.|++++|.+.+..|..|..+++|+.|+++.+.+ +..+..+++|+.|++++|.+.+..|..+.++++|+
T Consensus 262 ~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 341 (844)
T 3j0a_A 262 GLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVA 341 (844)
T ss_dssp TTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCC
T ss_pred ccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCC
Confidence 14677788888888777778888888888888876654 34577788888888888888887788888888888
Q ss_pred eeccccccccCcchhhhhcCCCccEEeccCCcccc--------cccCcCCccccccCc----------------------
Q 046265 239 IVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYG--------SLNFSMNNITRSIPP---------------------- 288 (639)
Q Consensus 239 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--------~l~ls~n~~~~~~p~---------------------- 288 (639)
.|++++|.+++..+..|..+++|+.|++++|.+.+ .+++++|+++ .+|.
T Consensus 342 ~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~-~l~~~~~~l~~L~ls~N~l~~l~~~~ 420 (844)
T 3j0a_A 342 YIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLV-TLPKINLTANLIHLSENRLENLDILY 420 (844)
T ss_dssp EEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCC-CCCCCCTTCCEEECCSCCCCSSTTHH
T ss_pred EEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcc-cccccccccceeecccCccccCchhh
Confidence 88888888888877788888888888888888764 2344555544 2222
Q ss_pred cccCCCCCCEEeccCCcccccCCc-cccCCCCCCeeeccCccCc-----ccCCcCccCCCCCCEEeCCCCCCCcccccCC
Q 046265 289 KIGKLYQLHKLDFSLNHIVGELPI-ELGNLKSLNYRALNGNKVY-----GSLPRVLGSISDLEYLDLSTNYNNEFRKEFP 362 (639)
Q Consensus 289 ~~~~l~~L~~L~Ls~N~~~~~~p~-~~~~l~~L~~L~l~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p 362 (639)
.++.+++|+.|++++|++.+..+. .+..+++|+.|++++|.+. +..|..+..+++|+.|+|++| .+.+..|
T Consensus 421 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N---~l~~~~~ 497 (844)
T 3j0a_A 421 FLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHN---YLNSLPP 497 (844)
T ss_dssp HHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHH---HHTTCCT
T ss_pred hhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCC---cccccCh
Confidence 234677788888888887754432 3455677777778777775 334456777788888888874 4445556
Q ss_pred hhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeeeeeecC
Q 046265 363 VELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRGLIRN 421 (639)
Q Consensus 363 ~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~g~~p~ 421 (639)
..+..+++|+.|++++|.+++.. + ..+. ++|+.||+++|++++.+|.
T Consensus 498 ~~~~~l~~L~~L~Ls~N~l~~l~-~---------~~~~--~~L~~L~Ls~N~l~~~~~~ 544 (844)
T 3j0a_A 498 GVFSHLTALRGLSLNSNRLTVLS-H---------NDLP--ANLEILDISRNQLLAPNPD 544 (844)
T ss_dssp TSSSSCCSCSEEEEESCCCSSCC-C---------CCCC--SCCCEEEEEEECCCCCCSC
T ss_pred hHccchhhhheeECCCCCCCccC-h---------hhhh--ccccEEECCCCcCCCCChh
Confidence 66778888888888888777533 2 1122 5688888888888887774
No 14
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2e-40 Score=378.16 Aligned_cols=344 Identities=20% Similarity=0.245 Sum_probs=297.8
Q ss_pred CCcccccCCccccCCCCCCEEECcCCCCcc-----------------CCCCCCC--CCCCCCEEEcccCcCCCCCCcccC
Q 046265 15 SNTLFAIIPPQIGNISNLKFLDMGNNQLSG-----------------VIPQEID--PLTHLKHLYINVNKLRGSVPREVG 75 (639)
Q Consensus 15 ~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~-----------------~~p~~~~--~L~~L~~L~L~~N~l~~~~p~~~~ 75 (639)
.|++.+ +|+.|+++++|++|+|++|.+++ .+|..++ .+++|++|+|++|++.+.+|..|+
T Consensus 434 ~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~ 512 (876)
T 4ecn_A 434 TNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLY 512 (876)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGG
T ss_pred cCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHh
Confidence 478888 89999999999999999999998 3899988 999999999999999999999999
Q ss_pred CCCCCCEEeeeccc-Ccc-ccCccccCCC-------CCC--------cccCCC--CCcccCCCCccEEEccCCcCcccCC
Q 046265 76 QLSSLKQLVLYCNG-LSG-WLPSSFGNLN-------NLA--------IGSMPN--SLSNLTSLSLFHLDLSENQLSGSIP 136 (639)
Q Consensus 76 ~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~--------~~~lp~--~~~~l~~L~L~~L~L~~N~l~~~~p 136 (639)
++++|++|+|++|+ +++ .+|..++++. +|+ +..+|. .+.++++| ++|+|++|+++ .+|
T Consensus 513 ~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L--~~L~Ls~N~l~-~lp 589 (876)
T 4ecn_A 513 DLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKL--GLLDCVHNKVR-HLE 589 (876)
T ss_dssp GCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTC--CEEECTTSCCC-BCC
T ss_pred CCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCC--CEEECCCCCcc-cch
Confidence 99999999999998 998 8898776554 665 457888 88999988 79999999999 888
Q ss_pred ccccCCCCCCEEeccCCCCCCCCCccccCCCc-ccEEEcccCcCCccCCccCcCCCC--CCeEEccCCcccccc------
Q 046265 137 HFLGHLSNLAVLHLGDNSLFGSIPPILGKVQS-LLSLGFDLNLLNGVLPPSISNLSN--LEGLYLYSSLVSAEI------ 207 (639)
Q Consensus 137 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~l~~--L~~L~l~~~~~~~~~------ 207 (639)
.|+.+++|+.|+|++|+++ .+|..+..+++ |+.|++++|.++ .+|..+..++. |+.|+++.+.+...+
T Consensus 590 -~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~ 666 (876)
T 4ecn_A 590 -AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCS 666 (876)
T ss_dssp -CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSC
T ss_pred -hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhh
Confidence 8999999999999999999 89999999999 999999999999 78888887765 999999987764322
Q ss_pred -c--cccCCcEEEcCCcccCCCCCccc-cCCCCCceeccccccccCcchhhhhcC-------CCccEEeccCCccccccc
Q 046265 208 -G--NLLQLIELEIDNKQLFGQIPKSL-RNFTSLNIVHLEQNHLTGNIYEVFGIY-------PNLTFLDLSQNNFYGSLN 276 (639)
Q Consensus 208 -~--~l~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l-------~~L~~L~Ls~N~l~~~l~ 276 (639)
. .+++|+.|++++|++. .+|..+ ..+++|+.|+|++|.++...+..+... ++|+.|+|++|++
T Consensus 667 l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L----- 740 (876)
T 4ecn_A 667 MDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKL----- 740 (876)
T ss_dssp TTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCC-----
T ss_pred hccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCC-----
Confidence 2 3348999999999997 566654 589999999999999996554444433 3899999887776
Q ss_pred CcCCccccccCcccc--CCCCCCEEeccCCcccccCCccccCCCCCCeeeccC------ccCcccCCcCccCCCCCCEEe
Q 046265 277 FSMNNITRSIPPKIG--KLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNG------NKVYGSLPRVLGSISDLEYLD 348 (639)
Q Consensus 277 ls~n~~~~~~p~~~~--~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~------N~l~~~~p~~~~~l~~L~~L~ 348 (639)
+ .+|..+. .+++|+.|+|++|++.+ +|..+..+++|+.|+|++ |++.+.+|..++.+++|+.|+
T Consensus 741 ------~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~ 812 (876)
T 4ecn_A 741 ------T-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQ 812 (876)
T ss_dssp ------C-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEE
T ss_pred ------c-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEE
Confidence 3 6888887 89999999999999997 799999999999999976 888999999999999999999
Q ss_pred CCCCCCCcccccCChhhhccccCCeeeccCCcCceee
Q 046265 349 LSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERY 385 (639)
Q Consensus 349 Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~ 385 (639)
|++|++ +.+|..+. ++|+.|++++|.+....
T Consensus 813 Ls~N~L----~~Ip~~l~--~~L~~LdLs~N~l~~i~ 843 (876)
T 4ecn_A 813 IGSNDI----RKVDEKLT--PQLYILDIADNPNISID 843 (876)
T ss_dssp CCSSCC----CBCCSCCC--SSSCEEECCSCTTCEEE
T ss_pred CCCCCC----CccCHhhc--CCCCEEECCCCCCCccC
Confidence 999654 55676654 69999999999887644
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=359.63 Aligned_cols=397 Identities=20% Similarity=0.234 Sum_probs=327.4
Q ss_pred ccceeeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCC
Q 046265 2 SCLAFFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLK 81 (639)
Q Consensus 2 ~~~~~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 81 (639)
.|.|..-......++.-...+|..+. +++++|+|++|.+++..+.+|..+++|++|+|++|++++..|..|+++++|+
T Consensus 2 ~c~~~~~~~~~~c~~~~l~~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~ 79 (570)
T 2z63_A 2 PCVEVVPNITYQCMELNFYKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLS 79 (570)
T ss_dssp CSEEEETTTEEECCSSCCSSCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CccccCCCcEEEeCCCCccccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCC
Confidence 46555543333344444457887664 5899999999999988888999999999999999999987788899999999
Q ss_pred EEeeecccCccccCccccCCCCCCc--------ccCCC-CCcccCCCCccEEEccCCcCcc-cCCccccCCCCCCEEecc
Q 046265 82 QLVLYCNGLSGWLPSSFGNLNNLAI--------GSMPN-SLSNLTSLSLFHLDLSENQLSG-SIPHFLGHLSNLAVLHLG 151 (639)
Q Consensus 82 ~L~L~~N~l~~~~p~~~~~l~~L~~--------~~lp~-~~~~l~~L~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~ 151 (639)
+|+|++|++++..|..|+++++|+. ..+|. .+.++++| ++|++++|.+++ .+|..|+++++|++|+++
T Consensus 80 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L--~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~ 157 (570)
T 2z63_A 80 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTL--KELNVAHNLIQSFKLPEYFSNLTNLEHLDLS 157 (570)
T ss_dssp EEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTC--CEEECCSSCCCCCCCCGGGGGCTTCCEEECT
T ss_pred EEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccc--cEEecCCCccceecChhhhcccCCCCEEeCc
Confidence 9999999999988899999998872 33333 57788877 799999999986 478999999999999999
Q ss_pred CCCCCCCCCccccCCCcc----cEEEcccCcCCccCCccCcCCCCCCeEEccCC--------------------------
Q 046265 152 DNSLFGSIPPILGKVQSL----LSLGFDLNLLNGVLPPSISNLSNLEGLYLYSS-------------------------- 201 (639)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L----~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~-------------------------- 201 (639)
+|++++..|..++.+++| +.|++++|.+++..|..+..+ +|+.|+++.+
T Consensus 158 ~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~ 236 (570)
T 2z63_A 158 SNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGE 236 (570)
T ss_dssp TSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEE
T ss_pred CCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeecccc
Confidence 999998778888888888 899999999998888777655 6777766543
Q ss_pred ------------------------------------ccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccc
Q 046265 202 ------------------------------------LVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQN 245 (639)
Q Consensus 202 ------------------------------------~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N 245 (639)
..+..+..+++|+.|++++|.+. .+|.++..+ +|+.|++++|
T Consensus 237 ~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n 314 (570)
T 2z63_A 237 FRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNC 314 (570)
T ss_dssp CCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESC
T ss_pred ccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccC
Confidence 12234566788999999999886 578888888 9999999999
Q ss_pred cccCcchhhhhcCCCccEEeccCCcccc-----------cccCcCCcccccc--CccccCCCCCCEEeccCCcccccCCc
Q 046265 246 HLTGNIYEVFGIYPNLTFLDLSQNNFYG-----------SLNFSMNNITRSI--PPKIGKLYQLHKLDFSLNHIVGELPI 312 (639)
Q Consensus 246 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-----------~l~ls~n~~~~~~--p~~~~~l~~L~~L~Ls~N~~~~~~p~ 312 (639)
.+..... ..+++|+.|++++|.+.+ .+++++|.+++.. |..+..+++|+.|++++|.+.+..+
T Consensus 315 ~~~~l~~---~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~- 390 (570)
T 2z63_A 315 KFGQFPT---LKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS- 390 (570)
T ss_dssp BCSSCCB---CBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-
T ss_pred cccccCc---ccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-
Confidence 9885433 467889999999888754 3678889888654 7788899999999999999986554
Q ss_pred cccCCCCCCeeeccCccCcccCC-cCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCc-eeecCcch
Q 046265 313 ELGNLKSLNYRALNGNKVYGSLP-RVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWE-ERYRPKSV 390 (639)
Q Consensus 313 ~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~-~~~~~~~~ 390 (639)
.+..+++|+.|++++|.+.+..| ..+..+++|+.|++++| .+.+..|..+..+++|+.|++++|.+. +.. |
T Consensus 391 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n---~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-p--- 463 (570)
T 2z63_A 391 NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT---HTRVAFNGIFNGLSSLEVLKMAGNSFQENFL-P--- 463 (570)
T ss_dssp EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTS---CCEECCTTTTTTCTTCCEEECTTCEEGGGEE-C---
T ss_pred cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCC---cccccchhhhhcCCcCcEEECcCCcCccccc-h---
Confidence 49999999999999999998766 57899999999999995 556667888999999999999999887 344 4
Q ss_pred hhhhhhhhhhhcccCcEEccCCCeeeeeecCC
Q 046265 391 IWKAWRSLISRMHGLSCIDISYNELRGLIRNS 422 (639)
Q Consensus 391 ~~~~~~~~~~~l~~L~~ldls~N~l~g~~p~~ 422 (639)
..+..+++|+.||+++|++++..|..
T Consensus 464 ------~~~~~l~~L~~L~l~~n~l~~~~~~~ 489 (570)
T 2z63_A 464 ------DIFTELRNLTFLDLSQCQLEQLSPTA 489 (570)
T ss_dssp ------SCCTTCTTCCEEECTTSCCCEECTTT
T ss_pred ------hhhhcccCCCEEECCCCccccCChhh
Confidence 56788999999999999999987753
No 16
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.6e-39 Score=349.17 Aligned_cols=369 Identities=19% Similarity=0.192 Sum_probs=297.7
Q ss_pred EEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCC-CcccCCCCCCCEEeeec
Q 046265 9 FQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSV-PREVGQLSSLKQLVLYC 87 (639)
Q Consensus 9 ~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~ 87 (639)
..++.+++++. .+|. +. ++|++|+|++|.+++..|..|+.+++|++|+|++|.+.+.+ |..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 34566656554 6776 43 78999999999999888999999999999999999997655 56799999999999999
Q ss_pred ccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCcc--ccCCCCCCEEeccCCCCCCCCCcc-cc
Q 046265 88 NGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHF--LGHLSNLAVLHLGDNSLFGSIPPI-LG 164 (639)
Q Consensus 88 N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~ 164 (639)
|++++..|..|+++++| ++|+|++|++++.+|.. +..+++|++|+|++|++++..|.. +.
T Consensus 89 n~l~~~~~~~~~~l~~L-----------------~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 151 (455)
T 3v47_A 89 NQFLQLETGAFNGLANL-----------------EVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFL 151 (455)
T ss_dssp CTTCEECTTTTTTCTTC-----------------CEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGG
T ss_pred CccCccChhhccCcccC-----------------CEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccC
Confidence 99998888888888744 59999999999766655 899999999999999999887876 89
Q ss_pred CCCcccEEEcccCcCCccCCccCcCC--CCCCeEEccCCcccc------------ccccccCCcEEEcCCcccCCCCCcc
Q 046265 165 KVQSLLSLGFDLNLLNGVLPPSISNL--SNLEGLYLYSSLVSA------------EIGNLLQLIELEIDNKQLFGQIPKS 230 (639)
Q Consensus 165 ~l~~L~~L~l~~N~l~~~~p~~~~~l--~~L~~L~l~~~~~~~------------~~~~l~~L~~L~l~~n~l~~~~p~~ 230 (639)
.+++|++|++++|.+++..|..+..+ .+|+.|+++.+.+.. .+..+++|+.|++++|++.+..|..
T Consensus 152 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~ 231 (455)
T 3v47_A 152 NMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKR 231 (455)
T ss_dssp GCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHH
T ss_pred CCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhh
Confidence 99999999999999999988888776 567777777554432 1224467778888888777776666
Q ss_pred ccCC---CCCceeccccccccCcc----------hhhhhc--CCCccEEeccCCcccccccCcCCccccccCccccCCCC
Q 046265 231 LRNF---TSLNIVHLEQNHLTGNI----------YEVFGI--YPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQ 295 (639)
Q Consensus 231 ~~~l---~~L~~L~L~~N~l~~~~----------~~~~~~--l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~ 295 (639)
+..+ ++|+.|++++|.+.+.. +..+.. .++|+.|++++| .+++..|..++.+++
T Consensus 232 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n-----------~l~~~~~~~~~~l~~ 300 (455)
T 3v47_A 232 FFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKS-----------KIFALLKSVFSHFTD 300 (455)
T ss_dssp HHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSS-----------CCCEECTTTTTTCTT
T ss_pred hhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCc-----------cccccchhhcccCCC
Confidence 5443 67777777777554321 111111 246667775554 455678888999999
Q ss_pred CCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeee
Q 046265 296 LHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELD 375 (639)
Q Consensus 296 L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~ 375 (639)
|+.|++++|++.+..|..|..+++|+.|++++|.+.+..|..++.+++|+.|++++|+ +.+..|..+..+++|+.|+
T Consensus 301 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~---l~~~~~~~~~~l~~L~~L~ 377 (455)
T 3v47_A 301 LEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNH---IRALGDQSFLGLPNLKELA 377 (455)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSC---CCEECTTTTTTCTTCCEEE
T ss_pred CCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCc---ccccChhhccccccccEEE
Confidence 9999999999998889999999999999999999998888899999999999999964 4555678899999999999
Q ss_pred ccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeeeeeecCC
Q 046265 376 LVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRGLIRNS 422 (639)
Q Consensus 376 l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~g~~p~~ 422 (639)
+++|.+.+.. + ..+..+++|+.+++++|++++.+|..
T Consensus 378 L~~N~l~~~~-~---------~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 378 LDTNQLKSVP-D---------GIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp CCSSCCSCCC-T---------TTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCCCccccCC-H---------hHhccCCcccEEEccCCCcccCCCcc
Confidence 9999888633 3 45678899999999999999988753
No 17
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.8e-39 Score=357.46 Aligned_cols=387 Identities=21% Similarity=0.200 Sum_probs=258.4
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeee
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLY 86 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 86 (639)
.+..+++++|++.+..|..|.++++|++|+|++|.+++..|.+|+.+++|++|+|++|++++..|..|+++++|++|+++
T Consensus 27 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 106 (549)
T 2z81_A 27 AMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLM 106 (549)
T ss_dssp TCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECT
T ss_pred CccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECC
Confidence 46678888898888888889999999999999999988888889999999999999999987666668899999999999
Q ss_pred cccCcc-ccCccccCCCCCC---------cccCC-CCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCC
Q 046265 87 CNGLSG-WLPSSFGNLNNLA---------IGSMP-NSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSL 155 (639)
Q Consensus 87 ~N~l~~-~~p~~~~~l~~L~---------~~~lp-~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 155 (639)
+|++++ ..|..++++++|+ ++.+| ..+.++++| ++|++++|++++..|..+..+++|++|+++.|.+
T Consensus 107 ~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L--~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 107 GNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSL--NELEIKALSLRNYQSQSLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEE--EEEEEEETTCCEECTTTTTTCSEEEEEEEECSBS
T ss_pred CCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccccc--CeeeccCCcccccChhhhhccccCceEecccCcc
Confidence 998886 3567788888776 23444 467777766 7888888888888888888888888888877776
Q ss_pred CCCCCcc-ccCCCcccEEEcccCcCCccC--Cc-cCcCCCCCCeEEccCCc-----------------------------
Q 046265 156 FGSIPPI-LGKVQSLLSLGFDLNLLNGVL--PP-SISNLSNLEGLYLYSSL----------------------------- 202 (639)
Q Consensus 156 ~~~~p~~-~~~l~~L~~L~l~~N~l~~~~--p~-~~~~l~~L~~L~l~~~~----------------------------- 202 (639)
.. +|.. ++.+++|++|++++|.+++.. |. ....+++|+.|+++.+.
T Consensus 185 ~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~ 263 (549)
T 2z81_A 185 AF-LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTL 263 (549)
T ss_dssp TT-HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEE
T ss_pred cc-cchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccc
Confidence 53 3433 356788888888888887641 11 11223344444433221
Q ss_pred -----------------------------cccc---------cccccCCcEEEcCCcccCCCCCccc-cCCCCCceeccc
Q 046265 203 -----------------------------VSAE---------IGNLLQLIELEIDNKQLFGQIPKSL-RNFTSLNIVHLE 243 (639)
Q Consensus 203 -----------------------------~~~~---------~~~l~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~L~ 243 (639)
++.. +....+|+.|++++|.+. .+|..+ ..+++|++|+++
T Consensus 264 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls 342 (549)
T 2z81_A 264 NGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLS 342 (549)
T ss_dssp ECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECC
T ss_pred cccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEcc
Confidence 1110 111246777788887774 567665 578999999999
Q ss_pred cccccCcchhh---hhcCCCccEEeccCCcccc---------------cccCcCCccccccCccccCCCCCCEEeccCCc
Q 046265 244 QNHLTGNIYEV---FGIYPNLTFLDLSQNNFYG---------------SLNFSMNNITRSIPPKIGKLYQLHKLDFSLNH 305 (639)
Q Consensus 244 ~N~l~~~~~~~---~~~l~~L~~L~Ls~N~l~~---------------~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~ 305 (639)
+|.+++..|.. ++.+++|++|++++|++.+ .+++++|+++ .+|..+..+++|+.|++++|.
T Consensus 343 ~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~ 421 (549)
T 2z81_A 343 ENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTG 421 (549)
T ss_dssp SSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSC
T ss_pred CCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCC
Confidence 99998876543 6778999999998888742 1445555555 455555555566666666665
Q ss_pred ccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCceee
Q 046265 306 IVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERY 385 (639)
Q Consensus 306 ~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~ 385 (639)
+. .+|..+. ++|+.|++++|++++.+ ..+++|+.|++++|++. .+|. ...+++|+.|++++|.+++..
T Consensus 422 l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~----~ip~-~~~l~~L~~L~Ls~N~l~~~~ 489 (549)
T 2z81_A 422 IR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK----TLPD-ASLFPVLLVMKISRNQLKSVP 489 (549)
T ss_dssp CS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS----SCCC-GGGCTTCCEEECCSSCCCCCC
T ss_pred cc-cccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC----cCCC-cccCccCCEEecCCCccCCcC
Confidence 54 2232221 35566666666655422 34556666666664433 2333 244556666666666555433
Q ss_pred cCcchhhhhhhhhhhhcccCcEEccCCCeeeeeec
Q 046265 386 RPKSVIWKAWRSLISRMHGLSCIDISYNELRGLIR 420 (639)
Q Consensus 386 ~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~g~~p 420 (639)
| ..+..+++|+.+|+++|++.+..|
T Consensus 490 -~---------~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 490 -D---------GIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp -T---------TGGGGCTTCCEEECCSSCBCCCHH
T ss_pred -H---------HHHhcCcccCEEEecCCCccCCCc
Confidence 2 335555666666666666655544
No 18
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=375.69 Aligned_cols=403 Identities=20% Similarity=0.173 Sum_probs=298.2
Q ss_pred ccceeeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCC-CcccCCCCCC
Q 046265 2 SCLAFFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSV-PREVGQLSSL 80 (639)
Q Consensus 2 ~~~~~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~-p~~~~~l~~L 80 (639)
+|.+.. ..++-+++++. .+|. ..+++++|||++|.+++..|..|..+++|++|+|++|...+.+ |.+|+++++|
T Consensus 1 ~C~~~~-~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L 75 (844)
T 3j0a_A 1 SCSFDG-RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNL 75 (844)
T ss_dssp CCBTTT-EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTC
T ss_pred CceEec-eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCC
Confidence 465543 55677777776 5665 4579999999999999999999999999999999999766566 7889999999
Q ss_pred CEEeeecccCccccCccccCCCCCCc---------ccCCCC--CcccCCCCccEEEccCCcCcccCC-ccccCCCCCCEE
Q 046265 81 KQLVLYCNGLSGWLPSSFGNLNNLAI---------GSMPNS--LSNLTSLSLFHLDLSENQLSGSIP-HFLGHLSNLAVL 148 (639)
Q Consensus 81 ~~L~L~~N~l~~~~p~~~~~l~~L~~---------~~lp~~--~~~l~~L~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L 148 (639)
++|+|++|.+++..|..|+++++|+. +.+|.. +.++++| ++|+|++|.+++..+ ..|+++++|++|
T Consensus 76 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L--~~L~Ls~N~l~~~~~~~~~~~L~~L~~L 153 (844)
T 3j0a_A 76 RILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKAL--TRLDLSKNQIRSLYLHPSFGKLNSLKSI 153 (844)
T ss_dssp CEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSC--CEEEEESCCCCCCCCCGGGGTCSSCCEE
T ss_pred CEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCC--CEEECCCCcccccccchhHhhCCCCCEE
Confidence 99999999999999999999999972 223443 7788887 799999999987655 578999999999
Q ss_pred eccCCCCCCCCCccccCC--CcccEEEcccCcCCccCCccCcCCCC------CCeEEccCCccc----ccc---------
Q 046265 149 HLGDNSLFGSIPPILGKV--QSLLSLGFDLNLLNGVLPPSISNLSN------LEGLYLYSSLVS----AEI--------- 207 (639)
Q Consensus 149 ~L~~N~l~~~~p~~~~~l--~~L~~L~l~~N~l~~~~p~~~~~l~~------L~~L~l~~~~~~----~~~--------- 207 (639)
+|++|.+++..|..+..+ ++|+.|+++.|.+.+..|..+..+.+ |+.|+++.+.+. ..+
T Consensus 154 ~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l 233 (844)
T 3j0a_A 154 DFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQA 233 (844)
T ss_dssp EEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCB
T ss_pred ECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccc
Confidence 999999999888888877 88999999999998888877776665 888888765321 111
Q ss_pred ---------------------------cc--ccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcC
Q 046265 208 ---------------------------GN--LLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIY 258 (639)
Q Consensus 208 ---------------------------~~--l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 258 (639)
.. .++|+.|++++|.+.+..|..+..+++|+.|++++|.+++..+..|..+
T Consensus 234 ~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 313 (844)
T 3j0a_A 234 FSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGL 313 (844)
T ss_dssp SEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTC
T ss_pred cceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCC
Confidence 11 2578999999999988888888999999999999999998888889999
Q ss_pred CCccEEeccCCcccc-------------cccCcCCccccccCccccCCCCCCEEeccCCcccccCC--------------
Q 046265 259 PNLTFLDLSQNNFYG-------------SLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELP-------------- 311 (639)
Q Consensus 259 ~~L~~L~Ls~N~l~~-------------~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p-------------- 311 (639)
++|++|++++|.+.+ .+++++|.+++..+..+..+++|+.|++++|.+.+...
T Consensus 314 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l 393 (844)
T 3j0a_A 314 DNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKL 393 (844)
T ss_dssp SSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCC
T ss_pred CCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCc
Confidence 999999999988754 25677888877666677778888888888887763211
Q ss_pred ----c----------------------cccCCCCCCeeeccCccCcccCCc-CccCCCCCCEEeCCCCCCCccc--ccCC
Q 046265 312 ----I----------------------ELGNLKSLNYRALNGNKVYGSLPR-VLGSISDLEYLDLSTNYNNEFR--KEFP 362 (639)
Q Consensus 312 ----~----------------------~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~~~~~~--~~~p 362 (639)
. .+..+++|+.|++++|++++..+. .+..+++|+.|++++|.+.... +..|
T Consensus 394 ~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~ 473 (844)
T 3j0a_A 394 VTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCW 473 (844)
T ss_dssp CCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCS
T ss_pred ccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccch
Confidence 0 011334444444444444432221 1233444444444443332111 2223
Q ss_pred hhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeeeeeecC
Q 046265 363 VELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRGLIRN 421 (639)
Q Consensus 363 ~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~g~~p~ 421 (639)
..+..+++|+.|++++|.+++.. | ..+..+++|+.||+++|++++..|.
T Consensus 474 ~~~~~l~~L~~L~Ls~N~l~~~~-~---------~~~~~l~~L~~L~Ls~N~l~~l~~~ 522 (844)
T 3j0a_A 474 DVFEGLSHLQVLYLNHNYLNSLP-P---------GVFSHLTALRGLSLNSNRLTVLSHN 522 (844)
T ss_dssp SCSSCBCCEECCCCCHHHHTTCC-T---------TSSSSCCSCSEEEEESCCCSSCCCC
T ss_pred hhhcCcccccEEECCCCcccccC-h---------hHccchhhhheeECCCCCCCccChh
Confidence 34555666666666666655433 2 5577889999999999999876553
No 19
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.4e-39 Score=354.60 Aligned_cols=195 Identities=23% Similarity=0.254 Sum_probs=151.9
Q ss_pred EEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccC
Q 046265 11 VVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGL 90 (639)
Q Consensus 11 ~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 90 (639)
.+.+++++. .+|..+. ++|++|+|++|.+++..|.+|..+++|++|+|++|++++..|.+|+++++|++|+|++|++
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 86 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCcc
Confidence 567777776 6777665 7999999999999988899999999999999999999988888999999999999999999
Q ss_pred ccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcc-cCCccccCCCCCCEEeccCCCCCCCCC-ccccCCCc
Q 046265 91 SGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSG-SIPHFLGHLSNLAVLHLGDNSLFGSIP-PILGKVQS 168 (639)
Q Consensus 91 ~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~ 168 (639)
++..|..|+++++|+ +|++++|++++ ..|..++++++|++|++++|.+.+.+| ..+.++++
T Consensus 87 ~~~~~~~~~~l~~L~-----------------~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~ 149 (549)
T 2z81_A 87 SSLSSSWFGPLSSLK-----------------YLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTS 149 (549)
T ss_dssp CSCCHHHHTTCTTCC-----------------EEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCE
T ss_pred CccCHHHhccCCCCc-----------------EEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccc
Confidence 988777788887554 77777777765 345667777777777777777544454 46777777
Q ss_pred ccEEEcccCcCCccCCccCcCCCCCCeEEccCCcc---ccc-cccccCCcEEEcCCcccCC
Q 046265 169 LLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLV---SAE-IGNLLQLIELEIDNKQLFG 225 (639)
Q Consensus 169 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~---~~~-~~~l~~L~~L~l~~n~l~~ 225 (639)
|++|++++|.+++..|..+..+++|+.|+++.+.+ +.. +..+++|+.|++++|++.+
T Consensus 150 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 150 LNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp EEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTT
T ss_pred cCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcccc
Confidence 77777777777777777777777777777764432 222 2346677777777777655
No 20
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=353.92 Aligned_cols=369 Identities=21% Similarity=0.223 Sum_probs=268.0
Q ss_pred EEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecc
Q 046265 9 FQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCN 88 (639)
Q Consensus 9 ~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 88 (639)
..+++++|++. .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 35788999888 5887776 89999999999999877788999999999999999999777889999999999999999
Q ss_pred cCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcc-cCCccccCCCCCCEEeccCCCCCCCCCccccCCC
Q 046265 89 GLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSG-SIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQ 167 (639)
Q Consensus 89 ~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 167 (639)
+++. +|.. .+++| ++|+|++|++++ .+|..|+++++|++|++++|.+++ ..+..++
T Consensus 80 ~l~~-lp~~--~l~~L-----------------~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~ 136 (520)
T 2z7x_B 80 KLVK-ISCH--PTVNL-----------------KHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIA 136 (520)
T ss_dssp CCCE-EECC--CCCCC-----------------SEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGT
T ss_pred ceee-cCcc--ccCCc-----------------cEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccc
Confidence 9984 5544 45543 355566565554 345555555566666665555543 2344444
Q ss_pred cc--cEEEcccCcC--CccCCccCcC------------------------------------------------------
Q 046265 168 SL--LSLGFDLNLL--NGVLPPSISN------------------------------------------------------ 189 (639)
Q Consensus 168 ~L--~~L~l~~N~l--~~~~p~~~~~------------------------------------------------------ 189 (639)
+| +.|++++|.+ .+..|..+..
T Consensus 137 ~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l 216 (520)
T 2z7x_B 137 HLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKL 216 (520)
T ss_dssp TSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGG
T ss_pred cceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhh
Confidence 44 5555555555 4444443333
Q ss_pred --CCCCCeEEccCCccccc-------cccccCCcEEEcCCcccCCCCCccc-----cCCCCCceeccccccccCcchhhh
Q 046265 190 --LSNLEGLYLYSSLVSAE-------IGNLLQLIELEIDNKQLFGQIPKSL-----RNFTSLNIVHLEQNHLTGNIYEVF 255 (639)
Q Consensus 190 --l~~L~~L~l~~~~~~~~-------~~~l~~L~~L~l~~n~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~~~~~ 255 (639)
+++|+.|+++.+.+... ....++|+.|++++|++.|.+|.++ ..+++|+.+++++|.+ ..+...+
T Consensus 217 ~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~ 295 (520)
T 2z7x_B 217 QTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYI 295 (520)
T ss_dssp GGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHH
T ss_pred ccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhh
Confidence 33344444432221110 0013478888999999988899888 8899999999999988 3332444
Q ss_pred hcC---CCccEEeccCCcccc-----------cccCcCCccccccCccccCCCCCCEEeccCCcccc--cCCccccCCCC
Q 046265 256 GIY---PNLTFLDLSQNNFYG-----------SLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVG--ELPIELGNLKS 319 (639)
Q Consensus 256 ~~l---~~L~~L~Ls~N~l~~-----------~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~--~~p~~~~~l~~ 319 (639)
..+ .+|+.|++++|.+.. .+++++|++++.+|..++.+++|+.|++++|++.+ .+|..+..+++
T Consensus 296 ~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~ 375 (520)
T 2z7x_B 296 YEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKS 375 (520)
T ss_dssp HHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTT
T ss_pred hcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCC
Confidence 433 568888888887643 36788888888889999999999999999999986 56677899999
Q ss_pred CCeeeccCccCcccCCc-CccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhh
Q 046265 320 LNYRALNGNKVYGSLPR-VLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSL 398 (639)
Q Consensus 320 L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~ 398 (639)
|+.|++++|.+.+.+|. .+..+++|+.|++++|+ +.+.+|..+. ++|+.|++++|.++ .+ | ..
T Consensus 376 L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~---l~~~~~~~l~--~~L~~L~Ls~N~l~-~i-p---------~~ 439 (520)
T 2z7x_B 376 LQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNI---LTDTIFRCLP--PRIKVLDLHSNKIK-SI-P---------KQ 439 (520)
T ss_dssp CCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSC---CCGGGGGSCC--TTCCEEECCSSCCC-CC-C---------GG
T ss_pred CCEEECCCCcCCcccccchhccCccCCEEECcCCC---CCcchhhhhc--ccCCEEECCCCccc-cc-c---------hh
Confidence 99999999999875665 47888999999999864 4444554443 68899999999887 34 4 45
Q ss_pred hhhcccCcEEccCCCeeeeeecC
Q 046265 399 ISRMHGLSCIDISYNELRGLIRN 421 (639)
Q Consensus 399 ~~~l~~L~~ldls~N~l~g~~p~ 421 (639)
+..++.|+.||+++|+++. +|.
T Consensus 440 ~~~l~~L~~L~L~~N~l~~-l~~ 461 (520)
T 2z7x_B 440 VVKLEALQELNVASNQLKS-VPD 461 (520)
T ss_dssp GGGCTTCCEEECCSSCCCC-CCT
T ss_pred hhcCCCCCEEECCCCcCCc-cCH
Confidence 6688999999999999984 553
No 21
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.4e-38 Score=348.61 Aligned_cols=375 Identities=21% Similarity=0.172 Sum_probs=268.4
Q ss_pred cceeeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCE
Q 046265 3 CLAFFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQ 82 (639)
Q Consensus 3 ~~~~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 82 (639)
|.|-....+++++|++.+ +|..+. ++|++|+|++|.+++..|.+|..+++|++|+|++|++++..|..|+++++|++
T Consensus 28 ~~~~~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 104 (562)
T 3a79_B 28 FSNELESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEY 104 (562)
T ss_dssp -----CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCE
T ss_pred cccCCCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCE
Confidence 445555789999999985 887775 89999999999999888889999999999999999999888999999999999
Q ss_pred EeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcc-cCCccccCCCCCCEEeccCCCCCCCCCc
Q 046265 83 LVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSG-SIPHFLGHLSNLAVLHLGDNSLFGSIPP 161 (639)
Q Consensus 83 L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 161 (639)
|+|++|+++ .+|.. .+++| ++|+|++|++++ .+|..|+++++|++|+|++|++++.
T Consensus 105 L~Ls~N~l~-~lp~~--~l~~L-----------------~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~--- 161 (562)
T 3a79_B 105 LDVSHNRLQ-NISCC--PMASL-----------------RHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL--- 161 (562)
T ss_dssp EECTTSCCC-EECSC--CCTTC-----------------SEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---
T ss_pred EECCCCcCC-ccCcc--ccccC-----------------CEEECCCCCccccCchHhhcccCcccEEecCCCccccC---
Confidence 999999998 45554 44433 588888888875 3467888888888888888888753
Q ss_pred cccCCCcc--cEEEcccCcC--CccCCccCcCC--------------------------CCCCeEEccCCc-----ccc-
Q 046265 162 ILGKVQSL--LSLGFDLNLL--NGVLPPSISNL--------------------------SNLEGLYLYSSL-----VSA- 205 (639)
Q Consensus 162 ~~~~l~~L--~~L~l~~N~l--~~~~p~~~~~l--------------------------~~L~~L~l~~~~-----~~~- 205 (639)
.+..+++| +.|++++|.+ ++..|..+..+ ++|+.++++.+. ++.
T Consensus 162 ~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~ 241 (562)
T 3a79_B 162 DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF 241 (562)
T ss_dssp TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH
T ss_pred chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHH
Confidence 34445555 8888888888 66666665543 345555554431 000
Q ss_pred --cc---------------------------ccccCCcEEEcCCcccCCCCCccc-----cCCCCCceeccccccccCcc
Q 046265 206 --EI---------------------------GNLLQLIELEIDNKQLFGQIPKSL-----RNFTSLNIVHLEQNHLTGNI 251 (639)
Q Consensus 206 --~~---------------------------~~l~~L~~L~l~~n~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~ 251 (639)
.+ ....+|++|++++|.+.|.+|..+ .+++.|+.++++.|.+ ..+
T Consensus 242 ~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p 320 (562)
T 3a79_B 242 LSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFS 320 (562)
T ss_dssp HHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSC
T ss_pred HHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-ecC
Confidence 00 112378888888888888888776 5666666666666655 222
Q ss_pred hhhhhc---CCCccEEeccCCcccc-----------cccCcCCccccccCccccCCCCCCEEeccCCccccc--CCcccc
Q 046265 252 YEVFGI---YPNLTFLDLSQNNFYG-----------SLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGE--LPIELG 315 (639)
Q Consensus 252 ~~~~~~---l~~L~~L~Ls~N~l~~-----------~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~--~p~~~~ 315 (639)
...+.. ..+|+.|++++|.+.. .+++++|.+++.+|..++.+++|+.|++++|++.+. +|..+.
T Consensus 321 ~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 400 (562)
T 3a79_B 321 KEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTK 400 (562)
T ss_dssp HHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTT
T ss_pred hhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhc
Confidence 122211 2456777777766532 256777777777888888888888888888888763 346678
Q ss_pred CCCCCCeeeccCccCcccCCc-CccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhh
Q 046265 316 NLKSLNYRALNGNKVYGSLPR-VLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKA 394 (639)
Q Consensus 316 ~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~ 394 (639)
.+++|+.|++++|++.+.+|. .+..+++|+.|++++|+ +.+..|..+. ++|+.|++++|.++. + |
T Consensus 401 ~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~---l~~~~~~~l~--~~L~~L~L~~N~l~~-i-p------- 466 (562)
T 3a79_B 401 NMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNM---LTGSVFRCLP--PKVKVLDLHNNRIMS-I-P------- 466 (562)
T ss_dssp TCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSC---CCGGGGSSCC--TTCSEEECCSSCCCC-C-C-------
T ss_pred CCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCC---CCcchhhhhc--CcCCEEECCCCcCcc-c-C-------
Confidence 888888888888888875554 47778888888888854 3344444433 578888888887763 3 3
Q ss_pred hhhhhhhcccCcEEccCCCeeeeeecC
Q 046265 395 WRSLISRMHGLSCIDISYNELRGLIRN 421 (639)
Q Consensus 395 ~~~~~~~l~~L~~ldls~N~l~g~~p~ 421 (639)
..+..++.|+.||+++|++++ +|.
T Consensus 467 --~~~~~l~~L~~L~L~~N~l~~-l~~ 490 (562)
T 3a79_B 467 --KDVTHLQALQELNVASNQLKS-VPD 490 (562)
T ss_dssp --TTTTSSCCCSEEECCSSCCCC-CCT
T ss_pred --hhhcCCCCCCEEECCCCCCCC-CCH
Confidence 344578888888888888884 443
No 22
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.2e-37 Score=336.20 Aligned_cols=348 Identities=19% Similarity=0.166 Sum_probs=297.6
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCC-CCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEee
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVI-PQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVL 85 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 85 (639)
.+..+++++|++.+..|..|+++++|++|+|++|.+.+.+ |..|..+++|++|+|++|++++..|..|+++++|++|+|
T Consensus 31 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 110 (455)
T 3v47_A 31 HVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTL 110 (455)
T ss_dssp TCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEEC
T ss_pred ccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeC
Confidence 3678899999999999999999999999999999997555 567999999999999999999888999999999999999
Q ss_pred ecccCccccCcc--ccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCcc-ccCCCCCCEEeccCCCCCCCCCcc
Q 046265 86 YCNGLSGWLPSS--FGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHF-LGHLSNLAVLHLGDNSLFGSIPPI 162 (639)
Q Consensus 86 ~~N~l~~~~p~~--~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~ 162 (639)
++|++++..|.. |..+++| ++|+|++|++++..|.. +.++++|++|++++|++++..|..
T Consensus 111 ~~n~l~~~~~~~~~~~~l~~L-----------------~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 173 (455)
T 3v47_A 111 TQCNLDGAVLSGNFFKPLTSL-----------------EMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEED 173 (455)
T ss_dssp TTSCCBTHHHHSSTTTTCTTC-----------------CEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTT
T ss_pred CCCCCCccccCcccccCcccC-----------------CEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhh
Confidence 999999765554 6666633 59999999999887876 899999999999999999998988
Q ss_pred ccCC--CcccEEEcccCcCCccCCcc--------CcCCCCCCeEEccCCccc----ccccc---ccCCcEEEcCCcccCC
Q 046265 163 LGKV--QSLLSLGFDLNLLNGVLPPS--------ISNLSNLEGLYLYSSLVS----AEIGN---LLQLIELEIDNKQLFG 225 (639)
Q Consensus 163 ~~~l--~~L~~L~l~~N~l~~~~p~~--------~~~l~~L~~L~l~~~~~~----~~~~~---l~~L~~L~l~~n~l~~ 225 (639)
+..+ .+|+.|++++|.+.+..+.. +..+++|+.|+++.+.+. ..+.. ..+|+.|++++|...+
T Consensus 174 l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 253 (455)
T 3v47_A 174 LLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMG 253 (455)
T ss_dssp SGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTS
T ss_pred hhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccc
Confidence 8876 79999999999998765544 336789999999987653 23333 3789999999886554
Q ss_pred CC----------CccccC--CCCCceeccccccccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCC
Q 046265 226 QI----------PKSLRN--FTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKL 293 (639)
Q Consensus 226 ~~----------p~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l 293 (639)
.. +..+.. .++|+.|++++|.+++..+..++.+++|++|++++|++ ++..|..+..+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l-----------~~~~~~~~~~l 322 (455)
T 3v47_A 254 SSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEI-----------NKIDDNAFWGL 322 (455)
T ss_dssp CCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCC-----------CEECTTTTTTC
T ss_pred cccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcc-----------cccChhHhcCc
Confidence 31 122222 36899999999999999999999999999999777765 45677889999
Q ss_pred CCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCe
Q 046265 294 YQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTE 373 (639)
Q Consensus 294 ~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~ 373 (639)
++|+.|++++|.+.+..|..+..+++|+.|++++|++++..|..+..+++|+.|++++|++..+ .+..+..+++|+.
T Consensus 323 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~ 399 (455)
T 3v47_A 323 THLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSV---PDGIFDRLTSLQK 399 (455)
T ss_dssp TTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC---CTTTTTTCTTCCE
T ss_pred ccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccC---CHhHhccCCcccE
Confidence 9999999999999988899999999999999999999998899999999999999999765433 3446788999999
Q ss_pred eeccCCcCceee
Q 046265 374 LDLVITFWEERY 385 (639)
Q Consensus 374 l~l~~n~~~~~~ 385 (639)
|++++|.+++..
T Consensus 400 L~l~~N~l~~~~ 411 (455)
T 3v47_A 400 IWLHTNPWDCSC 411 (455)
T ss_dssp EECCSSCBCCCT
T ss_pred EEccCCCcccCC
Confidence 999999999876
No 23
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.2e-38 Score=345.62 Aligned_cols=383 Identities=19% Similarity=0.200 Sum_probs=300.5
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeee
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLY 86 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 86 (639)
.+..+++++|++.+..|..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|+++ .+|.. .+++|++|+|+
T Consensus 22 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~ 98 (520)
T 2z7x_B 22 KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLS 98 (520)
T ss_dssp TCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECC
T ss_pred cccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEecc
Confidence 4567899999999888889999999999999999999888999999999999999999998 67766 89999999999
Q ss_pred cccCcc-ccCccccCCCCCCcccCC------CCCcccCCCCccEEEccCCcC--cccCCccccC----------------
Q 046265 87 CNGLSG-WLPSSFGNLNNLAIGSMP------NSLSNLTSLSLFHLDLSENQL--SGSIPHFLGH---------------- 141 (639)
Q Consensus 87 ~N~l~~-~~p~~~~~l~~L~~~~lp------~~~~~l~~L~L~~L~L~~N~l--~~~~p~~~~~---------------- 141 (639)
+|++++ .+|..|+++++|+...+. ..+..+++|+|++|++++|.+ ++..|..+..
T Consensus 99 ~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~ 178 (520)
T 2z7x_B 99 FNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEF 178 (520)
T ss_dssp SSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCC
T ss_pred CCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcch
Confidence 999987 478899999888722111 234555555556777777777 5555655544
Q ss_pred ----------CCCCCEEeccCCC-------CCCCCCccccC---------------------------CCcccEEEcccC
Q 046265 142 ----------LSNLAVLHLGDNS-------LFGSIPPILGK---------------------------VQSLLSLGFDLN 177 (639)
Q Consensus 142 ----------l~~L~~L~L~~N~-------l~~~~p~~~~~---------------------------l~~L~~L~l~~N 177 (639)
+++|+.|++++|. +.+.+| .++. .++|++|++++|
T Consensus 179 ~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n 257 (520)
T 2z7x_B 179 HFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNV 257 (520)
T ss_dssp CCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEE
T ss_pred hhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecc
Confidence 3344444444443 221111 1121 237888888889
Q ss_pred cCCccCCccC-----cCCCCCCeEEccCCcc--c-cccccc---cCCcEEEcCCcccCCCCCccccCCCCCceecccccc
Q 046265 178 LLNGVLPPSI-----SNLSNLEGLYLYSSLV--S-AEIGNL---LQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNH 246 (639)
Q Consensus 178 ~l~~~~p~~~-----~~l~~L~~L~l~~~~~--~-~~~~~l---~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 246 (639)
.++|.+|..+ ..+++|+.++++.+.+ | ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|.
T Consensus 258 ~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~ 335 (520)
T 2z7x_B 258 KLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNL 335 (520)
T ss_dssp EEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSC
T ss_pred cccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCc
Confidence 9988999988 8899999999986654 3 233333 57999999999885432 12688999999999999
Q ss_pred ccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCcc-ccCCCCCCeeec
Q 046265 247 LTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIE-LGNLKSLNYRAL 325 (639)
Q Consensus 247 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~-~~~l~~L~~L~l 325 (639)
+++..|..++.+++|++|++++|++.+. ..+|..++.+++|+.|++++|.+.+.+|.. +..+++|+.|++
T Consensus 336 l~~~~~~~~~~l~~L~~L~L~~N~l~~l---------~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L 406 (520)
T 2z7x_B 336 LTDTVFENCGHLTELETLILQMNQLKEL---------SKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNM 406 (520)
T ss_dssp CCTTTTTTCCCCSSCCEEECCSSCCCBH---------HHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEEC
T ss_pred cChhhhhhhccCCCCCEEEccCCccCcc---------ccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEEC
Confidence 9998889999999999999888776320 146677899999999999999999856654 888999999999
Q ss_pred cCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccC
Q 046265 326 NGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGL 405 (639)
Q Consensus 326 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L 405 (639)
++|++++.+|..+. ++|+.|++++|++. .+|..+..+++|+.|++++|.+.. + |. ..+..+++|
T Consensus 407 s~N~l~~~~~~~l~--~~L~~L~Ls~N~l~----~ip~~~~~l~~L~~L~L~~N~l~~-l-~~--------~~~~~l~~L 470 (520)
T 2z7x_B 407 SSNILTDTIFRCLP--PRIKVLDLHSNKIK----SIPKQVVKLEALQELNVASNQLKS-V-PD--------GIFDRLTSL 470 (520)
T ss_dssp CSSCCCGGGGGSCC--TTCCEEECCSSCCC----CCCGGGGGCTTCCEEECCSSCCCC-C-CT--------TTTTTCTTC
T ss_pred cCCCCCcchhhhhc--ccCCEEECCCCccc----ccchhhhcCCCCCEEECCCCcCCc-c-CH--------HHhccCCcc
Confidence 99999988887664 79999999996543 678888899999999999999884 4 31 247789999
Q ss_pred cEEccCCCeeeeeec
Q 046265 406 SCIDISYNELRGLIR 420 (639)
Q Consensus 406 ~~ldls~N~l~g~~p 420 (639)
+.+|+++|++++..+
T Consensus 471 ~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 471 QKIWLHTNPWDCSCP 485 (520)
T ss_dssp CEEECCSSCBCCCHH
T ss_pred cEEECcCCCCcccCC
Confidence 999999999998765
No 24
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=5e-39 Score=328.15 Aligned_cols=171 Identities=19% Similarity=0.274 Sum_probs=145.6
Q ss_pred ccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 465 NNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
++|+..+.||+|+||+||+|+ ..+|+.||||++..........+.+.+|+.++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 578888999999999999995 4678999999998766556667889999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
||+||+|.+++...+. ..+++..+..++.|++.||+|||.. +||||||||+|||++.++.+||+|||+|+.+....
T Consensus 104 y~~gg~L~~~i~~~~~-~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKG-VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp CCTTCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred CCCCCcHHHHHHHcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 9999999999975433 3467888999999999999999998 99999999999999999999999999999875432
Q ss_pred CCcceeeeeceeeCCC
Q 046265 624 SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~~~~~~~gt~~Y~APE 639 (639)
....+.+||+.|||||
T Consensus 180 ~~~~~~~GT~~YmAPE 195 (350)
T 4b9d_A 180 ELARACIGTPYYLSPE 195 (350)
T ss_dssp HHHHHHHSCCTTCCHH
T ss_pred ccccccCCCccccCHH
Confidence 3334578999999998
No 25
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=314.01 Aligned_cols=167 Identities=25% Similarity=0.380 Sum_probs=141.6
Q ss_pred ccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEecc
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 544 (639)
+++...+.||+|+||+||+|++++ .||||.++.........+.|.+|+.++++++|||||+++++|.+ +..|+||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 456678899999999999998764 59999998665556667889999999999999999999998865 568999999
Q ss_pred cCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC-
Q 046265 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS- 623 (639)
Q Consensus 545 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~- 623 (639)
|++|+|.++++... ..++|..+..++.|+|+||+|||+. +||||||||+|||+++++.+||+|||+|+......
T Consensus 113 ~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 113 CEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred CCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 99999999997543 3589999999999999999999998 99999999999999999999999999998764322
Q ss_pred -CCcceeeeeceeeCCC
Q 046265 624 -SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 -~~~~~~~gt~~Y~APE 639 (639)
......+||+.|||||
T Consensus 188 ~~~~~~~~GT~~ymAPE 204 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPE 204 (307)
T ss_dssp ------CCCCTTSCCHH
T ss_pred ceeecccccCCCccCHH
Confidence 2334578999999998
No 26
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.6e-36 Score=333.22 Aligned_cols=383 Identities=19% Similarity=0.199 Sum_probs=285.5
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeee
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLY 86 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 86 (639)
....+++++|++.+..|..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|+++ .+|.. .+++|++|+|+
T Consensus 53 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls 129 (562)
T 3a79_B 53 RTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLS 129 (562)
T ss_dssp TCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECC
T ss_pred CcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECC
Confidence 4567899999999988899999999999999999999988999999999999999999998 68876 89999999999
Q ss_pred cccCccc-cCccccCCCCCCcccC------CCCCcccCCCCccEEEccCCcC--cccCCccccCCC--CCCEEeccCCCC
Q 046265 87 CNGLSGW-LPSSFGNLNNLAIGSM------PNSLSNLTSLSLFHLDLSENQL--SGSIPHFLGHLS--NLAVLHLGDNSL 155 (639)
Q Consensus 87 ~N~l~~~-~p~~~~~l~~L~~~~l------p~~~~~l~~L~L~~L~L~~N~l--~~~~p~~~~~l~--~L~~L~L~~N~l 155 (639)
+|++++. +|..|+++++|+...+ ...+..++.|.|++|++++|++ ++..|..+..+. .| .+++++|.+
T Consensus 130 ~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~~n~~ 208 (562)
T 3a79_B 130 FNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVFHPNSL 208 (562)
T ss_dssp SSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEECSSSC
T ss_pred CCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEecCccc
Confidence 9999973 5689999988772211 1234555555556777777777 666666655433 11 122233333
Q ss_pred CCCCCcc-ccC-------------------------------------------------------CCcccEEEcccCcC
Q 046265 156 FGSIPPI-LGK-------------------------------------------------------VQSLLSLGFDLNLL 179 (639)
Q Consensus 156 ~~~~p~~-~~~-------------------------------------------------------l~~L~~L~l~~N~l 179 (639)
.+.++.. +.. ..+|++|++++|.+
T Consensus 209 ~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l 288 (562)
T 3a79_B 209 FSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTI 288 (562)
T ss_dssp CCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEE
T ss_pred hhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEe
Confidence 2222210 111 12677888888888
Q ss_pred CccCCccC-----cCCCCCCeEEccCCcc--c-ccccc---ccCCcEEEcCCcccCCCCCccccCCCCCceecccccccc
Q 046265 180 NGVLPPSI-----SNLSNLEGLYLYSSLV--S-AEIGN---LLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLT 248 (639)
Q Consensus 180 ~~~~p~~~-----~~l~~L~~L~l~~~~~--~-~~~~~---l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 248 (639)
+|.+|..+ ..++.|+.+++..+.+ | ..+.. ..+|+.|++++|.+.... ....+++|++|++++|.++
T Consensus 289 ~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~ 366 (562)
T 3a79_B 289 TERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFT 366 (562)
T ss_dssp CSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCC
T ss_pred eccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccc
Confidence 88888776 5555555555544332 2 11211 256889999998874322 1267889999999999999
Q ss_pred CcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCc-cccCCCCCCeeeccC
Q 046265 249 GNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPI-ELGNLKSLNYRALNG 327 (639)
Q Consensus 249 ~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~-~~~~l~~L~~L~l~~ 327 (639)
+..|..++.+++|++|++++|++.+. ..+|..+..+++|+.|++++|++.+.+|. .+..+++|+.|++++
T Consensus 367 ~~~~~~~~~l~~L~~L~L~~N~l~~~---------~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~ 437 (562)
T 3a79_B 367 DSVFQGCSTLKRLQTLILQRNGLKNF---------FKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSS 437 (562)
T ss_dssp TTTTTTCCSCSSCCEEECCSSCCCBT---------THHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCS
T ss_pred cchhhhhcccCCCCEEECCCCCcCCc---------ccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCC
Confidence 98888899999999999888776320 13456788899999999999999875554 578889999999999
Q ss_pred ccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcE
Q 046265 328 NKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSC 407 (639)
Q Consensus 328 N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ 407 (639)
|++++..|..+. ++|+.|++++|++. .+|..+..+++|+.|++++|.++. + |. ..+..++.|+.
T Consensus 438 n~l~~~~~~~l~--~~L~~L~L~~N~l~----~ip~~~~~l~~L~~L~L~~N~l~~-l-~~--------~~~~~l~~L~~ 501 (562)
T 3a79_B 438 NMLTGSVFRCLP--PKVKVLDLHNNRIM----SIPKDVTHLQALQELNVASNQLKS-V-PD--------GVFDRLTSLQY 501 (562)
T ss_dssp SCCCGGGGSSCC--TTCSEEECCSSCCC----CCCTTTTSSCCCSEEECCSSCCCC-C-CT--------TSTTTCTTCCC
T ss_pred CCCCcchhhhhc--CcCCEEECCCCcCc----ccChhhcCCCCCCEEECCCCCCCC-C-CH--------HHHhcCCCCCE
Confidence 999888777554 68999999997544 567777789999999999998884 4 31 23778889999
Q ss_pred EccCCCeeeeeec
Q 046265 408 IDISYNELRGLIR 420 (639)
Q Consensus 408 ldls~N~l~g~~p 420 (639)
+++++|++++..|
T Consensus 502 L~l~~N~~~c~c~ 514 (562)
T 3a79_B 502 IWLHDNPWDCTCP 514 (562)
T ss_dssp EECCSCCBCCCHH
T ss_pred EEecCCCcCCCcc
Confidence 9999999988765
No 27
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-35 Score=318.98 Aligned_cols=342 Identities=18% Similarity=0.172 Sum_probs=265.9
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeee
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLY 86 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 86 (639)
.+..+++++|++.+. | .++.+++|++|+|++|.+++. | ++.+++|++|++++|++++ +| ++++++|++|+++
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECC
Confidence 345667777777654 4 577777777777777777753 3 7777777777777777775 33 6777777777777
Q ss_pred cccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCC
Q 046265 87 CNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKV 166 (639)
Q Consensus 87 ~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 166 (639)
+|++++. | ++.++ +| ++|++++|++++. + ++.+++|++|++++|+..+.+ .++.+
T Consensus 115 ~N~l~~l-~--~~~l~---------------~L--~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l 169 (457)
T 3bz5_A 115 TNKLTKL-D--VSQNP---------------LL--TYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQ 169 (457)
T ss_dssp SSCCSCC-C--CTTCT---------------TC--CEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTC
T ss_pred CCcCCee-c--CCCCC---------------cC--CEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccC
Confidence 7777652 2 44443 34 6899999999864 3 788999999999999776666 47889
Q ss_pred CcccEEEcccCcCCccCCccCcCCCCCCeEEccCCcccc-ccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccc
Q 046265 167 QSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSA-EIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQN 245 (639)
Q Consensus 167 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N 245 (639)
++|+.|++++|.+++. | +..+++|+.|+++.+.+.. .++.+++|+.|++++|++.+ +| +..+++|+.|++++|
T Consensus 170 ~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N 243 (457)
T 3bz5_A 170 TQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVN 243 (457)
T ss_dssp TTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCCCCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSS
T ss_pred CcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCeeccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCC
Confidence 9999999999999874 4 7889999999998776543 47788999999999999987 56 788999999999999
Q ss_pred cccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCcc--------ccCC
Q 046265 246 HLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIE--------LGNL 317 (639)
Q Consensus 246 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~--------~~~l 317 (639)
.+++.. .+.+++|+.|++++|++. .+++++|.+.+.+| ++.+++|+.|++++|...+.+|.. +..+
T Consensus 244 ~l~~~~---~~~l~~L~~L~l~~n~L~-~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~ 317 (457)
T 3bz5_A 244 PLTELD---VSTLSKLTTLHCIQTDLL-EIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQN 317 (457)
T ss_dssp CCSCCC---CTTCTTCCEEECTTCCCS-CCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTC
T ss_pred cCCCcC---HHHCCCCCEEeccCCCCC-EEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhc
Confidence 999865 456788999999999874 68899999888887 467899999999999887776643 4556
Q ss_pred CCCCeeeccCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhh
Q 046265 318 KSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRS 397 (639)
Q Consensus 318 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~ 397 (639)
++|+.|++++|++++. | ++.+++|+.|++++|++..+ +.|..++++.|.+++..
T Consensus 318 ~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~l-----------~~L~~L~l~~n~l~g~~------------ 371 (457)
T 3bz5_A 318 PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQDF-----------SSVGKIPALNNNFEAEG------------ 371 (457)
T ss_dssp TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCBC-----------TTGGGSSGGGTSEEEEE------------
T ss_pred ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCCc-----------cccccccccCCcEEecc------------
Confidence 7888899999999873 3 78889999999998654432 34556677888777642
Q ss_pred hhhhcccCcEEccCCCeeeeeecCC
Q 046265 398 LISRMHGLSCIDISYNELRGLIRNS 422 (639)
Q Consensus 398 ~~~~l~~L~~ldls~N~l~g~~p~~ 422 (639)
.+..+..+|+++|+++|.+|..
T Consensus 372 ---~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 372 ---QTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp ---EEEECCCBCCBTTBEEEECCTT
T ss_pred ---eeeecCccccccCcEEEEcChh
Confidence 3456788999999999999953
No 28
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.9e-38 Score=320.30 Aligned_cols=166 Identities=27% Similarity=0.387 Sum_probs=148.3
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
..|+..+.||+|+||+||+|.. .+|+.||||++..... ...+.+.+|+.++++++|||||+++++|.+++..|+|||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4588888999999999999964 5789999999975432 234557899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
||++|+|.+++... .+++..+..++.|++.||+|||.. +||||||||+|||++.++.+||+|||+|+.+....
T Consensus 152 y~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 152 FLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp CCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 99999999999753 478899999999999999999999 99999999999999999999999999999876555
Q ss_pred CCcceeeeeceeeCCC
Q 046265 624 SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~~~~~~~gt~~Y~APE 639 (639)
....+.+||+.|||||
T Consensus 225 ~~~~~~~GTp~YmAPE 240 (346)
T 4fih_A 225 PRRKSLVGTPYWMAPE 240 (346)
T ss_dssp CCBCCCCSCGGGCCHH
T ss_pred CcccccccCcCcCCHH
Confidence 5566789999999998
No 29
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=8.9e-36 Score=335.07 Aligned_cols=396 Identities=21% Similarity=0.211 Sum_probs=246.7
Q ss_pred CCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccc
Q 046265 14 ESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGW 93 (639)
Q Consensus 14 ~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 93 (639)
+++.-...+|..+. +++++|||++|.|+++.|.+|.++++|++|||++|+|++..|.+|.++++|++|+|++|++++.
T Consensus 38 c~~~~l~~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l 115 (635)
T 4g8a_A 38 CMELNFYKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 115 (635)
T ss_dssp CTTSCCSSCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEE
T ss_pred CCCCCcCccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCC
Confidence 34433446777664 4788888888888877777888888888888888888866667788888888888888888877
Q ss_pred cCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCC-CCCccccCCCcccEE
Q 046265 94 LPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFG-SIPPILGKVQSLLSL 172 (639)
Q Consensus 94 ~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L 172 (639)
.+..|.++++|+ +|+|++|++++..+..|+++++|++|+|++|.+++ .+|..++.+++|++|
T Consensus 116 ~~~~f~~L~~L~-----------------~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 178 (635)
T 4g8a_A 116 ALGAFSGLSSLQ-----------------KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 178 (635)
T ss_dssp CGGGGTTCTTCC-----------------EEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEE
T ss_pred CHHHhcCCCCCC-----------------EEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhh
Confidence 777777777554 44555555544333344455555555555554433 234444444555555
Q ss_pred EcccCcCCccCCccCcCCCC---------------------------CCeEEccCCcc----------------------
Q 046265 173 GFDLNLLNGVLPPSISNLSN---------------------------LEGLYLYSSLV---------------------- 203 (639)
Q Consensus 173 ~l~~N~l~~~~p~~~~~l~~---------------------------L~~L~l~~~~~---------------------- 203 (639)
++++|.+++..|..+..+.+ ++.+++..+..
T Consensus 179 ~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~ 258 (635)
T 4g8a_A 179 DLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVL 258 (635)
T ss_dssp ECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEE
T ss_pred cccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccc
Confidence 55555444443333322111 11111110000
Q ss_pred ----------------------------------------c----------------------cccccccCCcEEEcCCc
Q 046265 204 ----------------------------------------S----------------------AEIGNLLQLIELEIDNK 221 (639)
Q Consensus 204 ----------------------------------------~----------------------~~~~~l~~L~~L~l~~n 221 (639)
. ..+.....++.|++.+|
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~ 338 (635)
T 4g8a_A 259 GEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNC 338 (635)
T ss_dssp ECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESC
T ss_pred cccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccc
Confidence 0 00111223455555555
Q ss_pred ccCCCCCc-------------------cccCCCCCceeccccccccC--cchhhhhcCCCccEEeccCCcccc-------
Q 046265 222 QLFGQIPK-------------------SLRNFTSLNIVHLEQNHLTG--NIYEVFGIYPNLTFLDLSQNNFYG------- 273 (639)
Q Consensus 222 ~l~~~~p~-------------------~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~------- 273 (639)
.+.+..+. ....+++|+.|++++|.+.. ..+..+..+.+|+.++++.|....
T Consensus 339 ~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~ 418 (635)
T 4g8a_A 339 KFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLG 418 (635)
T ss_dssp EESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTT
T ss_pred cccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccc
Confidence 44332221 11234555556666555532 223344445555555555554322
Q ss_pred -----cccCcCCccccccC-ccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccC-cccCCcCccCCCCCCE
Q 046265 274 -----SLNFSMNNITRSIP-PKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKV-YGSLPRVLGSISDLEY 346 (639)
Q Consensus 274 -----~l~ls~n~~~~~~p-~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l-~~~~p~~~~~l~~L~~ 346 (639)
.++++.++.....+ ..+..+.+++.++++.|.+.+..|..+..++.|+.|++++|.+ .+..|..+..+++|+.
T Consensus 419 l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~ 498 (635)
T 4g8a_A 419 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 498 (635)
T ss_dssp CTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCE
Confidence 13455555544433 4567788899999999999888888889999999999999875 4457888999999999
Q ss_pred EeCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeeeeeecCCCc-c
Q 046265 347 LDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRGLIRNSTG-I 425 (639)
Q Consensus 347 L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~g~~p~~~~-~ 425 (639)
|||++|+ +.+..|..+..+++|+.|++++|.+.+.. | ..+..+++|+.||+++|++++.+|..-. +
T Consensus 499 L~Ls~N~---L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~-~---------~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 565 (635)
T 4g8a_A 499 LDLSQCQ---LEQLSPTAFNSLSSLQVLNMSHNNFFSLD-T---------FPYKCLNSLQVLDYSLNHIMTSKKQELQHF 565 (635)
T ss_dssp EECTTSC---CCEECTTTTTTCTTCCEEECTTSCCCBCC-C---------GGGTTCTTCCEEECTTSCCCBCCSSCTTCC
T ss_pred EECCCCc---cCCcChHHHcCCCCCCEEECCCCcCCCCC-h---------hHHhCCCCCCEEECCCCcCCCCCHHHHHhh
Confidence 9999954 45556788899999999999999887754 4 5578889999999999999988875322 1
Q ss_pred -cccccccccCCCCCCC
Q 046265 426 -HYNLVDALQGNKGLCG 441 (639)
Q Consensus 426 -~~~~~~~~~~~~~l~g 441 (639)
.........+|+-.|.
T Consensus 566 ~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 566 PSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CTTCCEEECTTCCBCCS
T ss_pred hCcCCEEEeeCCCCccc
Confidence 1223334556665564
No 30
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.7e-38 Score=316.43 Aligned_cols=169 Identities=26% Similarity=0.384 Sum_probs=148.5
Q ss_pred ccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
++|+..++||+|+||+||+|+ ..+++.||||.+.+... .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 568899999999999999995 56789999999975321 1223467899999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
|||+||+|.+++...+ .+++..+..++.|++.||+|||.. +|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 112 Ey~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp CCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 9999999999998654 477799999999999999999999 9999999999999999999999999999987533
Q ss_pred C--CCcceeeeeceeeCCC
Q 046265 623 S--SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~--~~~~~~~gt~~Y~APE 639 (639)
. ....+.+||+.|||||
T Consensus 186 ~~~~~~~~~~GTp~YmAPE 204 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPE 204 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHH
T ss_pred CCcccccCcccCcccCCHH
Confidence 2 2345689999999998
No 31
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.1e-36 Score=326.10 Aligned_cols=320 Identities=24% Similarity=0.283 Sum_probs=227.7
Q ss_pred ccceeee-EEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCC
Q 046265 2 SCLAFFF-FQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSL 80 (639)
Q Consensus 2 ~~~~~~~-~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L 80 (639)
.|.|... ..++.+++++. .+|..+. +++++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|.++++|
T Consensus 6 ~C~C~~~~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 82 (477)
T 2id5_A 6 RCECSAQDRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL 82 (477)
T ss_dssp TCEEETTTTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred CCeECCCCCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccC
Confidence 3778753 45666666665 6787764 689999999999998889999999999999999999998889999999999
Q ss_pred CEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCC
Q 046265 81 KQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIP 160 (639)
Q Consensus 81 ~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 160 (639)
++|+|++|++++..+..|.++++| ++|+|++|++++..|..|..+++|++|+|++|.+.+..|
T Consensus 83 ~~L~L~~n~l~~~~~~~~~~l~~L-----------------~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 145 (477)
T 2id5_A 83 RTLGLRSNRLKLIPLGVFTGLSNL-----------------TKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH 145 (477)
T ss_dssp CEEECCSSCCCSCCTTSSTTCTTC-----------------CEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECT
T ss_pred CEEECCCCcCCccCcccccCCCCC-----------------CEEECCCCccccCChhHccccccCCEEECCCCccceeCh
Confidence 999999999997666667777643 589999999998889999999999999999999998888
Q ss_pred ccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccc----cccccccCCcEEEcCCcccCCCCCccccCCCC
Q 046265 161 PILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVS----AEIGNLLQLIELEIDNKQLFGQIPKSLRNFTS 236 (639)
Q Consensus 161 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 236 (639)
..|..+++|+.|++++|.+++..+..+..+++|+.|+++.+.+. ..+..+++|+.|++++|...+.+|.......+
T Consensus 146 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~ 225 (477)
T 2id5_A 146 RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN 225 (477)
T ss_dssp TSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCC
T ss_pred hhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCcc
Confidence 89999999999999999998776666777777777766654332 23445555666666655555555554444445
Q ss_pred CceeccccccccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccC
Q 046265 237 LNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGN 316 (639)
Q Consensus 237 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~ 316 (639)
|+.|++++|.+++..+..+..+++|+.|++++|.+ ++..+..+..+++|+.|++++|++.+..|..|..
T Consensus 226 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l-----------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 294 (477)
T 2id5_A 226 LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPI-----------STIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRG 294 (477)
T ss_dssp CSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCC-----------CEECTTSCTTCTTCCEEECCSSCCSEECTTTBTT
T ss_pred ccEEECcCCcccccCHHHhcCccccCeeECCCCcC-----------CccChhhccccccCCEEECCCCccceECHHHhcC
Confidence 55566665555554445555555555555444433 2233344455555555555555555555555555
Q ss_pred CCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCC
Q 046265 317 LKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTN 352 (639)
Q Consensus 317 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 352 (639)
+++|+.|++++|++++..+..|..+++|+.|++++|
T Consensus 295 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 295 LNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred cccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 555555555555555444444455555555555553
No 32
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.1e-36 Score=324.73 Aligned_cols=363 Identities=26% Similarity=0.292 Sum_probs=246.9
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCC-------------CEEEcccCcCCCCCCcc
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHL-------------KHLYINVNKLRGSVPRE 73 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L-------------~~L~L~~N~l~~~~p~~ 73 (639)
.+..+++++|++ +.+|++|+++++|++|++++|.++|.+|.+++.+++| ++|++++|.+++ +|..
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~ 89 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL 89 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC
T ss_pred cchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC
Confidence 355678889999 8999999999999999999999999999999999875 999999999985 6652
Q ss_pred cCCCCCCCEEeeecccCccccCccccCCCCCCcccC-CCCCccc-CCCCccEEEccCCcCcccCCccccCCCCCCEEecc
Q 046265 74 VGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSM-PNSLSNL-TSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLG 151 (639)
Q Consensus 74 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~l-p~~~~~l-~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 151 (639)
.++|++|++++|++++ +|..+.+++.|.+..- -..+..+ ++ |++|++++|++++ +| .++++++|++|+++
T Consensus 90 ---~~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~--L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~ 161 (454)
T 1jl5_A 90 ---PPHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPL--LEYLGVSNNQLEK-LP-ELQNSSFLKIIDVD 161 (454)
T ss_dssp ---CTTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTT--CCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred ---cCCCCEEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCC--CCEEECcCCCCCC-Cc-ccCCCCCCCEEECC
Confidence 3789999999999997 7776655555432110 0011111 33 4899999999996 77 59999999999999
Q ss_pred CCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccc
Q 046265 152 DNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSL 231 (639)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~ 231 (639)
+|++++ +|..+ .+|++|++++|.+++ +| .+..+++|+.|+++.+.+...-....+|+.|++++|.+. .+|. +
T Consensus 162 ~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~~~~L~~L~l~~n~l~-~lp~-~ 233 (454)
T 1jl5_A 162 NNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILE-ELPE-L 233 (454)
T ss_dssp SSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCS-SCCC-C
T ss_pred CCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCCcCcccEEECcCCcCC-cccc-c
Confidence 999986 66543 589999999999997 56 689999999999998766532123358999999999997 6774 8
Q ss_pred cCCCCCceeccccccccCcchhhhhcCCCccEEeccCCcccc---------cccCcCCccccccCccccCCCCCCEEecc
Q 046265 232 RNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYG---------SLNFSMNNITRSIPPKIGKLYQLHKLDFS 302 (639)
Q Consensus 232 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---------~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls 302 (639)
..+++|++|++++|++++.. . .+++|+.|++++|++.+ .+++++|++++ +|.. .++|+.|+++
T Consensus 234 ~~l~~L~~L~l~~N~l~~l~-~---~~~~L~~L~l~~N~l~~l~~~~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~ 305 (454)
T 1jl5_A 234 QNLPFLTTIYADNNLLKTLP-D---LPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSG-LSEL---PPNLYYLNAS 305 (454)
T ss_dssp TTCTTCCEEECCSSCCSSCC-S---CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSE-ESCC---CTTCCEEECC
T ss_pred CCCCCCCEEECCCCcCCccc-c---cccccCEEECCCCcccccCcccCcCCEEECcCCccCc-ccCc---CCcCCEEECc
Confidence 89999999999999999743 2 34789999999998875 36788888876 2221 1578888888
Q ss_pred CCcccccCCccccCC-CCCCeeeccCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcC
Q 046265 303 LNHIVGELPIELGNL-KSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFW 381 (639)
Q Consensus 303 ~N~~~~~~p~~~~~l-~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~ 381 (639)
+|++.+ ++ .+ ++|+.|++++|++++ +|.. +++|+.|++++|++.. +|. .+++|+.|+++.|.+
T Consensus 306 ~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~----lp~---~l~~L~~L~L~~N~l 369 (454)
T 1jl5_A 306 SNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE----VPE---LPQNLKQLHVEYNPL 369 (454)
T ss_dssp SSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC----CCC---CCTTCCEEECCSSCC
T ss_pred CCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc----ccc---hhhhccEEECCCCCC
Confidence 888875 22 23 478899999999885 6653 5789999999875543 454 467889999999988
Q ss_pred ce--eecCcchhhhhhhhhhhhc-------------ccCcEEccCCCeeee--eecC
Q 046265 382 EE--RYRPKSVIWKAWRSLISRM-------------HGLSCIDISYNELRG--LIRN 421 (639)
Q Consensus 382 ~~--~~~~~~~~~~~~~~~~~~l-------------~~L~~ldls~N~l~g--~~p~ 421 (639)
.+ .+ | ..+..+ ++|+.||+++|++++ .+|.
T Consensus 370 ~~l~~i-p---------~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 370 REFPDI-P---------ESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp SSCCCC-C---------TTCCEEECCC------------------------------
T ss_pred CcCCCC-h---------HHHHhhhhcccccccccccCcCCEEECCCCcCCccccchh
Confidence 87 44 3 223333 778899999999987 5653
No 33
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2e-37 Score=309.63 Aligned_cols=166 Identities=23% Similarity=0.343 Sum_probs=142.4
Q ss_pred CCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEc----CCceeEEe
Q 046265 468 DAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH----PRQSFLLY 542 (639)
Q Consensus 468 ~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv~ 542 (639)
+..+.||+|+||+||+|.. .+++.||||++..........+.|.+|++++++++|||||+++++|.+ ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 4456899999999999954 568999999998665555567789999999999999999999999875 34589999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC-CCCceEEccccccccCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG-LDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~-~~~~~kl~DfGla~~~~~ 621 (639)
|||++|+|.++++..+ .+++..+..++.|++.||+|||++. ++||||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999998653 4788999999999999999999871 2399999999999997 479999999999986542
Q ss_pred CCCCcceeeeeceeeCCC
Q 046265 622 DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~~~~~~gt~~Y~APE 639 (639)
....+.+||+.|||||
T Consensus 185 --~~~~~~~GTp~YmAPE 200 (290)
T 3fpq_A 185 --SFAKAVIGTPEFMAPE 200 (290)
T ss_dssp --TSBEESCSSCCCCCGG
T ss_pred --CccCCcccCccccCHH
Confidence 3445689999999998
No 34
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.2e-37 Score=313.50 Aligned_cols=170 Identities=24% Similarity=0.417 Sum_probs=145.0
Q ss_pred ccCCCcceeccCCCceEEEEEcC------CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCce
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP------SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS 538 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 538 (639)
++|...+.||+|+||+||+|++. +++.||||+++.. .....+.|.+|++++++++|||||+++|+|.+++..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 45667889999999999999753 4678999999753 344567899999999999999999999999999999
Q ss_pred eEEecccCCCChhHHhhcCC----------CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCce
Q 046265 539 FLLYEYLGRGSLAIILSNDA----------AIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA 608 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~ 608 (639)
|+|||||++|+|.++++..+ ....++|..+..++.|+++||+|||+. +||||||||+|||++.++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcE
Confidence 99999999999999997542 234689999999999999999999998 99999999999999999999
Q ss_pred EEccccccccCCCCCC--CcceeeeeceeeCCC
Q 046265 609 HVSDFGISKFLKPDSS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 609 kl~DfGla~~~~~~~~--~~~~~~gt~~Y~APE 639 (639)
||+|||+|+....... .....+||+.|||||
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE 200 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE 200 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHH
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHH
Confidence 9999999987643322 123367999999998
No 35
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=315.11 Aligned_cols=170 Identities=24% Similarity=0.408 Sum_probs=139.7
Q ss_pred ccCCCcceeccCCCceEEEEEcC------CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCce
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP------SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS 538 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 538 (639)
++|...+.||+|+||+||+|+++ +++.||||+++.. .....+.|.+|++++++++|||||+++|+|.+++..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 45566789999999999999764 4788999999753 345567899999999999999999999999999999
Q ss_pred eEEecccCCCChhHHhhcCCC------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC
Q 046265 539 FLLYEYLGRGSLAIILSNDAA------------IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY 606 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~ 606 (639)
|+|||||++|+|.++++.... ...++|..+..++.|+|+||+|||+. +||||||||+|||++.++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCC
Confidence 999999999999999976432 23589999999999999999999998 999999999999999999
Q ss_pred ceEEccccccccCCCCCC--CcceeeeeceeeCCC
Q 046265 607 DAHVSDFGISKFLKPDSS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 607 ~~kl~DfGla~~~~~~~~--~~~~~~gt~~Y~APE 639 (639)
.+||+|||+|+.+..... .....+||+.|||||
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE 230 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE 230 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHH
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChh
Confidence 999999999997643322 223468999999998
No 36
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=322.38 Aligned_cols=166 Identities=27% Similarity=0.391 Sum_probs=149.0
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
..|+..+.||+|+||+||+|.. .+|+.||||++...... ..+.+.+|+.+|++++|||||+++++|.+++.+|+|||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE 228 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 228 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS--SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence 5688889999999999999954 57899999999765422 34568899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
||+||+|.++++.. .+++..+..++.|++.||+|||.. +||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 229 y~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 229 FLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp CCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred CCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 99999999999753 378899999999999999999999 99999999999999999999999999999876655
Q ss_pred CCcceeeeeceeeCCC
Q 046265 624 SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~~~~~~~gt~~Y~APE 639 (639)
....+.+||+.|||||
T Consensus 302 ~~~~~~~GTp~YmAPE 317 (423)
T 4fie_A 302 PRRKSLVGTPYWMAPE 317 (423)
T ss_dssp CCBCCCEECTTTCCHH
T ss_pred ccccccccCcCcCCHH
Confidence 5566789999999998
No 37
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.9e-38 Score=316.26 Aligned_cols=169 Identities=22% Similarity=0.290 Sum_probs=140.8
Q ss_pred ccCCCcceeccCCCceEEEEEc----CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeE
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL----PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 540 (639)
++|+..+.||+|+||+||+|+. .+++.||||.++...........+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5788899999999999999964 246889999997644333334467899999999999999999999999999999
Q ss_pred EecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCC
Q 046265 541 LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
|||||+||+|.+++...+ .+++..+..++.|++.||+|||.. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 104 vmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp EECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred EEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 999999999999998654 477899999999999999999999 99999999999999999999999999999765
Q ss_pred CCCCCcceeeeeceeeCCC
Q 046265 621 PDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~~~~~~gt~~Y~APE 639 (639)
.......+.+||+.|||||
T Consensus 178 ~~~~~~~~~~GT~~YmAPE 196 (304)
T 3ubd_A 178 DHEKKAYSFCGTVEYMAPE 196 (304)
T ss_dssp ---CCCCSCCCCGGGCCHH
T ss_pred CCCccccccccCcccCCHH
Confidence 4444556689999999998
No 38
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.2e-37 Score=311.82 Aligned_cols=169 Identities=20% Similarity=0.307 Sum_probs=143.8
Q ss_pred CCCcceeccCCCceEEEEEcC------CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeE
Q 046265 467 FDAKYCIGTAGQASVYKAELP------SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 467 f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 540 (639)
++..+.||+|+||+||+|++. +++.||||+++... .....+.|.+|+.++++++|||||+++|+|.+++..++
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 445678999999999999763 46789999997543 33446789999999999999999999999999999999
Q ss_pred EecccCCCChhHHhhcCCC-------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc
Q 046265 541 LYEYLGRGSLAIILSNDAA-------------IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~ 607 (639)
|||||++|+|.+++..... ...++|..+.+++.|||+||+|||+. +||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 9999999999999965421 23589999999999999999999998 9999999999999999999
Q ss_pred eEEccccccccCCCCC--CCcceeeeeceeeCCC
Q 046265 608 AHVSDFGISKFLKPDS--SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 608 ~kl~DfGla~~~~~~~--~~~~~~~gt~~Y~APE 639 (639)
+||+|||+|+.+.... ......+||+.|||||
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE 217 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPE 217 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHH
Confidence 9999999998764322 2234568999999998
No 39
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=4.4e-37 Score=309.96 Aligned_cols=172 Identities=22% Similarity=0.430 Sum_probs=139.7
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC------
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR------ 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------ 536 (639)
..+|+..+.||+|+||+||+|+. .+|+.||||+++... .....+.+.+|+.++++++|||||+++++|.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 34688899999999999999964 578999999997644 3345677899999999999999999999997544
Q ss_pred ------ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEE
Q 046265 537 ------QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHV 610 (639)
Q Consensus 537 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl 610 (639)
..|+|||||++|+|.+++.......+.++..+..++.|+++||+|||+. +||||||||+|||++.++.+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEE
Confidence 3689999999999999998877666778888999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCC------------CcceeeeeceeeCCC
Q 046265 611 SDFGISKFLKPDSS------------NWSEFVGTFGYVAPI 639 (639)
Q Consensus 611 ~DfGla~~~~~~~~------------~~~~~~gt~~Y~APE 639 (639)
+|||+|+.+..... ...+.+||+.|||||
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE 200 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPE 200 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHH
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHH
Confidence 99999997654321 123468999999998
No 40
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8e-37 Score=302.57 Aligned_cols=168 Identities=23% Similarity=0.334 Sum_probs=132.6
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
.++|+..+.||+|+||+||+|.. .+|+.||||.+.+... .....+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 36799999999999999999965 5789999999976542 233456789999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||| +|+|.+++...+ .+++..+..++.|++.|++|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 92 mEy~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred EeCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 9999 689999987654 478899999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCcceeeeeceeeCCC
Q 046265 622 DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~~~~~~gt~~Y~APE 639 (639)
. ....+.+||+.|||||
T Consensus 165 ~-~~~~~~~GT~~Y~APE 181 (275)
T 3hyh_A 165 G-NFLKTSCGSPNYAAPE 181 (275)
T ss_dssp -----------CTTSCHH
T ss_pred C-CccCCeeECcccCChh
Confidence 3 2345679999999998
No 41
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=8.2e-35 Score=327.21 Aligned_cols=385 Identities=21% Similarity=0.198 Sum_probs=258.1
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeee
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLY 86 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 86 (639)
....+|+++|+|.+..|.+|.++++|++|||++|+|+++.|.+|.+|++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 45688999999999888999999999999999999998888899999999999999999997666789999999999999
Q ss_pred cccCccccCccccCCCCCCc----------ccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCC----CEEeccC
Q 046265 87 CNGLSGWLPSSFGNLNNLAI----------GSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNL----AVLHLGD 152 (639)
Q Consensus 87 ~N~l~~~~p~~~~~l~~L~~----------~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L----~~L~L~~ 152 (639)
+|++++..+..|+++++|+. ..+|..+.+++.| ++|+|++|++++..|..+..+.++ ..++++.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L--~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~ 210 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNL--EHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 210 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTC--CEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhh--hhhcccCccccccccccccchhhhhhhhhhhhccc
Confidence 99999888888998887761 1234455555555 566666666666656555544433 2456666
Q ss_pred CCCCCCCCccccCCCcccEEEcccCcCCcc--------------------------------------------------
Q 046265 153 NSLFGSIPPILGKVQSLLSLGFDLNLLNGV-------------------------------------------------- 182 (639)
Q Consensus 153 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-------------------------------------------------- 182 (639)
|.+....|..+. ...+..+++.+|.....
T Consensus 211 n~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ 289 (635)
T 4g8a_A 211 NPMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 289 (635)
T ss_dssp CCCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEE
T ss_pred CcccccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhh
Confidence 655432221111 11112222222111000
Q ss_pred --------CC----------------------ccCcCCCCCCeEEccCCcc-----------------------cccccc
Q 046265 183 --------LP----------------------PSISNLSNLEGLYLYSSLV-----------------------SAEIGN 209 (639)
Q Consensus 183 --------~p----------------------~~~~~l~~L~~L~l~~~~~-----------------------~~~~~~ 209 (639)
.+ ..+....+++.|++.++.+ +.....
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~ 369 (635)
T 4g8a_A 290 YLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD 369 (635)
T ss_dssp CCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCB
T ss_pred hhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccc
Confidence 00 0011112233333321110 001123
Q ss_pred ccCCcEEEcCCcccCC-------------------------CCCccccCCCCCceeccccccccCcc-hhhhhcCCCccE
Q 046265 210 LLQLIELEIDNKQLFG-------------------------QIPKSLRNFTSLNIVHLEQNHLTGNI-YEVFGIYPNLTF 263 (639)
Q Consensus 210 l~~L~~L~l~~n~l~~-------------------------~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~ 263 (639)
+++|+.++++.|.+.. .++..+..+++|+.++++.|...... ...|..+++++.
T Consensus 370 l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~ 449 (635)
T 4g8a_A 370 LPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 449 (635)
T ss_dssp CTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCE
T ss_pred ccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccc
Confidence 4455555555544321 13445667888999999887766544 356788889999
Q ss_pred EeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCccc-ccCCccccCCCCCCeeeccCccCcccCCcCccCCC
Q 046265 264 LDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIV-GELPIELGNLKSLNYRALNGNKVYGSLPRVLGSIS 342 (639)
Q Consensus 264 L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 342 (639)
++++.|.+ .+..|..+..++.++.|++++|.+. +.+|..|..+++|+.|+|++|++++..|..|.+++
T Consensus 450 l~ls~n~l-----------~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~ 518 (635)
T 4g8a_A 450 LDISHTHT-----------RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 518 (635)
T ss_dssp EECTTSCC-----------EECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred cccccccc-----------ccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCC
Confidence 99776665 3456666777788888888888644 44677788888888888888888887788888888
Q ss_pred CCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhc-ccCcEEccCCCeeeee
Q 046265 343 DLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRM-HGLSCIDISYNELRGL 418 (639)
Q Consensus 343 ~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l-~~L~~ldls~N~l~g~ 418 (639)
+|+.|+|++|++ .+..|..+..+++|+.|++++|.+++.. | ..+..+ ++|+.||+++|+++-.
T Consensus 519 ~L~~L~Ls~N~l---~~l~~~~~~~l~~L~~L~Ls~N~l~~~~-~---------~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 519 SLQVLNMSHNNF---FSLDTFPYKCLNSLQVLDYSLNHIMTSK-K---------QELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp TCCEEECTTSCC---CBCCCGGGTTCTTCCEEECTTSCCCBCC-S---------SCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCCEEECCCCcC---CCCChhHHhCCCCCCEEECCCCcCCCCC-H---------HHHHhhhCcCCEEEeeCCCCccc
Confidence 888888888543 3444666778888888888888877655 4 445555 5688888888887654
No 42
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.4e-36 Score=308.59 Aligned_cols=162 Identities=24% Similarity=0.253 Sum_probs=139.2
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
+.|+..+.||+|+||+||+|+. .+|+.||||+++.... ..+|+.++++++|||||++++++.+++..|+|||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4566778899999999999964 5789999999975432 2469999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC-ceEEccccccccCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFLKPD 622 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~-~~kl~DfGla~~~~~~ 622 (639)
||+||+|.++++..+ .+++..+..++.|++.||+|||.. +||||||||+|||++.++ .+||+|||+|+.+...
T Consensus 131 y~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 131 LLEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred ccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 999999999998654 478899999999999999999998 999999999999999988 6999999999987543
Q ss_pred CC-----CcceeeeeceeeCCC
Q 046265 623 SS-----NWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~-----~~~~~~gt~~Y~APE 639 (639)
.. .....+||+.|||||
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE 226 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPE 226 (336)
T ss_dssp ---------CCCCCCGGGCCHH
T ss_pred CcccceecCCccccCccccCHH
Confidence 21 123468999999998
No 43
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-34 Score=311.57 Aligned_cols=318 Identities=22% Similarity=0.191 Sum_probs=258.7
Q ss_pred CCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCC
Q 046265 32 LKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPN 111 (639)
Q Consensus 32 L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~ 111 (639)
-+.++.++++++ .+|..+. ++++.|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|
T Consensus 13 ~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L------- 82 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL------- 82 (477)
T ss_dssp TTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTC-------
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccC-------
Confidence 468999999998 6787664 689999999999998788899999999999999999998888888888744
Q ss_pred CCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCC
Q 046265 112 SLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLS 191 (639)
Q Consensus 112 ~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 191 (639)
++|+|++|++++..+..|.++++|++|+|++|++.+..|..|..+++|+.|++++|.+++..|..|..++
T Consensus 83 ----------~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 152 (477)
T 2id5_A 83 ----------RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN 152 (477)
T ss_dssp ----------CEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCT
T ss_pred ----------CEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCC
Confidence 5999999999966667789999999999999999998899999999999999999999999898999999
Q ss_pred CCCeEEccCCccc----cccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEecc
Q 046265 192 NLEGLYLYSSLVS----AEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLS 267 (639)
Q Consensus 192 ~L~~L~l~~~~~~----~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 267 (639)
+|+.|+++.+.+. ..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+.++.......+|+.|+++
T Consensus 153 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 232 (477)
T 2id5_A 153 SLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSIT 232 (477)
T ss_dssp TCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEE
T ss_pred CCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECc
Confidence 9999888765442 346777888888888888877777778888888888888877766666555555678888876
Q ss_pred CCcccccccCcCCccccccC-ccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCE
Q 046265 268 QNNFYGSLNFSMNNITRSIP-PKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEY 346 (639)
Q Consensus 268 ~N~l~~~l~ls~n~~~~~~p-~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 346 (639)
+|++. .+| ..+..+++|+.|++++|.+.+..+..|..+++|+.|++++|++.+..|..|..+++|+.
T Consensus 233 ~n~l~------------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 300 (477)
T 2id5_A 233 HCNLT------------AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRV 300 (477)
T ss_dssp SSCCC------------SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCE
T ss_pred CCccc------------ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCE
Confidence 66652 344 45677788888888888888777777888888888888888888777888888888888
Q ss_pred EeCCCCCCCcccccCChhhhccccCCeeeccCCcCcee
Q 046265 347 LDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEER 384 (639)
Q Consensus 347 L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~ 384 (639)
|+|++|++.. ..+..+..+++|+.|++++|.+...
T Consensus 301 L~L~~N~l~~---~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 301 LNVSGNQLTT---LEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp EECCSSCCSC---CCGGGBSCGGGCCEEECCSSCEECS
T ss_pred EECCCCcCce---eCHhHcCCCcccCEEEccCCCccCc
Confidence 8888855433 2344567777888888888877654
No 44
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=5.7e-34 Score=308.06 Aligned_cols=341 Identities=25% Similarity=0.366 Sum_probs=270.0
Q ss_pred eEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeec
Q 046265 8 FFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYC 87 (639)
Q Consensus 8 ~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 87 (639)
+..+++.++.+.. +| .+..+++|++|+|++|.+++..| +..+++|++|++++|++++ +++ ++++++|++|++++
T Consensus 48 l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L~~ 121 (466)
T 1o6v_A 48 VTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-ITP-LANLTNLTGLTLFN 121 (466)
T ss_dssp CCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCS
T ss_pred ccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCcccc-Chh-hcCCCCCCEEECCC
Confidence 4566777777764 55 47788889999999888885543 8888899999999888885 444 88888899999988
Q ss_pred ccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCC
Q 046265 88 NGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQ 167 (639)
Q Consensus 88 N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 167 (639)
|++++..+ +.+++ +| ++|++++|.+++ +| .+..+++|++|+++ |.+.+. + .+..++
T Consensus 122 n~l~~~~~--~~~l~---------------~L--~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~-~-~~~~l~ 177 (466)
T 1o6v_A 122 NQITDIDP--LKNLT---------------NL--NRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDL-K-PLANLT 177 (466)
T ss_dssp SCCCCCGG--GTTCT---------------TC--SEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCC-G-GGTTCT
T ss_pred CCCCCChH--HcCCC---------------CC--CEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCc-h-hhccCC
Confidence 88875433 55554 33 589999998874 44 47889999999986 555543 2 388899
Q ss_pred cccEEEcccCcCCccCCccCcCCCCCCeEEccCCcccc--ccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccc
Q 046265 168 SLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSA--EIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQN 245 (639)
Q Consensus 168 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~--~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N 245 (639)
+|+.|++++|.+++. ..+..+++|+.|+++.+.+.. .++.+++|+.|++++|++.+. ..+..+++|+.|++++|
T Consensus 178 ~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n 253 (466)
T 1o6v_A 178 TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANN 253 (466)
T ss_dssp TCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSS
T ss_pred CCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccccccccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCC
Confidence 999999999998754 347888999999998765532 266788999999999988653 35788899999999999
Q ss_pred cccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeec
Q 046265 246 HLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRAL 325 (639)
Q Consensus 246 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l 325 (639)
.+++..+ +..+++|+.|++++|.+. + +|. +..+++|+.|++++|++.+..| +..+++|+.|++
T Consensus 254 ~l~~~~~--~~~l~~L~~L~l~~n~l~-----------~-~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 254 QISNLAP--LSGLTKLTELKLGANQIS-----------N-ISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp CCCCCGG--GTTCTTCSEEECCSSCCC-----------C-CGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred ccccchh--hhcCCCCCEEECCCCccC-----------c-ccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 9988765 788899999998777763 2 333 7788999999999999986544 789999999999
Q ss_pred cCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccC
Q 046265 326 NGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGL 405 (639)
Q Consensus 326 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L 405 (639)
++|++++..| +..+++|+.|++++|++..+ ..+..+++|+.|++++|.+.+.. | +..++.|
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-----~~l~~l~~L~~L~l~~n~l~~~~-~-----------~~~l~~L 377 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV-----SSLANLTNINWLSAGHNQISDLT-P-----------LANLTRI 377 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-----GGGTTCTTCCEEECCSSCCCBCG-G-----------GTTCTTC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc-----hhhccCCCCCEEeCCCCccCccc-h-----------hhcCCCC
Confidence 9999997766 78999999999999765443 36888999999999999887644 2 6788999
Q ss_pred cEEccCCCeeeee
Q 046265 406 SCIDISYNELRGL 418 (639)
Q Consensus 406 ~~ldls~N~l~g~ 418 (639)
+.+++++|++++.
T Consensus 378 ~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 378 TQLGLNDQAWTNA 390 (466)
T ss_dssp CEEECCCEEEECC
T ss_pred CEEeccCCcccCC
Confidence 9999999999884
No 45
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7.2e-36 Score=302.60 Aligned_cols=166 Identities=27% Similarity=0.312 Sum_probs=135.6
Q ss_pred cCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC----ceeEE
Q 046265 466 NFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR----QSFLL 541 (639)
Q Consensus 466 ~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~lv 541 (639)
++...+.||+|+||+||+|++ +|+.||||++.... .....+++|+..+.+++|||||+++++|.+++ ..|+|
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 456678999999999999987 47999999986422 22223345677777899999999999998754 57999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEeecCCCCCeeeCCCCceEEcccccc
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD-----YFPPIVHRDISSKNVLLGLDYDAHVSDFGIS 616 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-----~~~~iiHrdlk~~Nill~~~~~~kl~DfGla 616 (639)
||||++|+|.++++.. .++|..+.+++.|+++||+|+|+. +.++||||||||+|||++.++.+||+|||+|
T Consensus 80 ~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred ecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 9999999999999754 478999999999999999999976 2468999999999999999999999999999
Q ss_pred ccCCCCCC----CcceeeeeceeeCCC
Q 046265 617 KFLKPDSS----NWSEFVGTFGYVAPI 639 (639)
Q Consensus 617 ~~~~~~~~----~~~~~~gt~~Y~APE 639 (639)
+....... .....+||+.|||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE 182 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPE 182 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHH
T ss_pred ccccCCCCceeeecccccccccccCHH
Confidence 87644322 223468999999998
No 46
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.1e-34 Score=316.70 Aligned_cols=335 Identities=19% Similarity=0.150 Sum_probs=230.5
Q ss_pred CCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcc
Q 046265 28 NISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIG 107 (639)
Q Consensus 28 ~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~ 107 (639)
.+++++.|++++|.+....+..|..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--- 125 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLL--- 125 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC---
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCC---
Confidence 46788999999999886655567889999999999999987777789999999999999999988777777777743
Q ss_pred cCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccC
Q 046265 108 SMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSI 187 (639)
Q Consensus 108 ~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 187 (639)
++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|+.+++|+.|++++|.+++.. +
T Consensus 126 --------------~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~ 188 (597)
T 3oja_B 126 --------------TVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---L 188 (597)
T ss_dssp --------------CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---G
T ss_pred --------------CEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---h
Confidence 48899999988655566788999999999999998888888888999999999999887642 3
Q ss_pred cCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEecc
Q 046265 188 SNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLS 267 (639)
Q Consensus 188 ~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 267 (639)
..+++|+. |++++|.+.+ +...++|+.|++++|.++...+. ..++|+.|+++
T Consensus 189 ~~l~~L~~--------------------L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~---~~~~L~~L~L~ 240 (597)
T 3oja_B 189 SLIPSLFH--------------------ANVSYNLLST-----LAIPIAVEELDASHNSINVVRGP---VNVELTILKLQ 240 (597)
T ss_dssp GGCTTCSE--------------------EECCSSCCSE-----EECCTTCSEEECCSSCCCEEECS---CCSCCCEEECC
T ss_pred hhhhhhhh--------------------hhcccCcccc-----ccCCchhheeeccCCcccccccc---cCCCCCEEECC
Confidence 33444444 4455554432 22334566666666666543322 12566677766
Q ss_pred CCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEE
Q 046265 268 QNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYL 347 (639)
Q Consensus 268 ~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 347 (639)
+|.+. + +..++.+++|+.|++++|.+.+.+|..|..+++|+.|+|++|.+++ +|..+..+++|+.|
T Consensus 241 ~n~l~-----------~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L 306 (597)
T 3oja_B 241 HNNLT-----------D--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVL 306 (597)
T ss_dssp SSCCC-----------C--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEE
T ss_pred CCCCC-----------C--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEE
Confidence 65552 1 3456666777777777777777667777777777777777777764 45556667777777
Q ss_pred eCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeeeeeecCCCcccc
Q 046265 348 DLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRGLIRNSTGIHY 427 (639)
Q Consensus 348 ~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~g~~p~~~~~~~ 427 (639)
+|++|.+. .+|..+..+++|+.|++++|.+.+.. +..++.|+.|++++|++++..+. ..+..
T Consensus 307 ~Ls~N~l~----~i~~~~~~l~~L~~L~L~~N~l~~~~-------------~~~~~~L~~L~l~~N~~~~~~~~-~~~~~ 368 (597)
T 3oja_B 307 DLSHNHLL----HVERNQPQFDRLENLYLDHNSIVTLK-------------LSTHHTLKNLTLSHNDWDCNSLR-ALFRN 368 (597)
T ss_dssp ECCSSCCC----CCGGGHHHHTTCSEEECCSSCCCCCC-------------CCTTCCCSEEECCSSCEEHHHHH-HHTTT
T ss_pred ECCCCCCC----ccCcccccCCCCCEEECCCCCCCCcC-------------hhhcCCCCEEEeeCCCCCChhHH-HHHHH
Confidence 77775433 35666667777777777777665421 34566777777887777654321 11222
Q ss_pred cccccccCCCCCCCC
Q 046265 428 NLVDALQGNKGLCGD 442 (639)
Q Consensus 428 ~~~~~~~~~~~l~g~ 442 (639)
.....+.++...|+.
T Consensus 369 ~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 369 VARPAVDDADQHCKI 383 (597)
T ss_dssp CCTTTBCCCCCCCCT
T ss_pred HhhhccccccccCCc
Confidence 222334455566664
No 47
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.8e-33 Score=297.17 Aligned_cols=311 Identities=19% Similarity=0.167 Sum_probs=214.4
Q ss_pred CCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcc
Q 046265 28 NISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIG 107 (639)
Q Consensus 28 ~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~ 107 (639)
.++++++|++++|.++...+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|+++++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--- 119 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLL--- 119 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC---
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCC---
Confidence 46889999999999985544457889999999999999987777789999999999999999998777777777643
Q ss_pred cCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccC
Q 046265 108 SMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSI 187 (639)
Q Consensus 108 ~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 187 (639)
++|+|++|+++...+..|.++++|++|++++|++++..|..+..+++|++|++++|.+++. .+
T Consensus 120 --------------~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~ 182 (390)
T 3o6n_A 120 --------------TVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DL 182 (390)
T ss_dssp --------------CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CG
T ss_pred --------------CEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---cc
Confidence 5899999999854445578899999999999999887788899999999999999998854 23
Q ss_pred cCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEecc
Q 046265 188 SNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLS 267 (639)
Q Consensus 188 ~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 267 (639)
..+++|+.|+++ +|.+.+ +...++|+.|++++|.++.... ...++|+.|+++
T Consensus 183 ~~l~~L~~L~l~--------------------~n~l~~-----~~~~~~L~~L~l~~n~l~~~~~---~~~~~L~~L~l~ 234 (390)
T 3o6n_A 183 SLIPSLFHANVS--------------------YNLLST-----LAIPIAVEELDASHNSINVVRG---PVNVELTILKLQ 234 (390)
T ss_dssp GGCTTCSEEECC--------------------SSCCSE-----EECCSSCSEEECCSSCCCEEEC---CCCSSCCEEECC
T ss_pred ccccccceeecc--------------------cccccc-----cCCCCcceEEECCCCeeeeccc---cccccccEEECC
Confidence 444555555554 444322 1223455556666665554322 123556666655
Q ss_pred CCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEE
Q 046265 268 QNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYL 347 (639)
Q Consensus 268 ~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 347 (639)
+|.+.+ ++.+..+++|+.|++++|.+.+..|..+..+++|+.|++++|++++ +|..+..+++|+.|
T Consensus 235 ~n~l~~-------------~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L 300 (390)
T 3o6n_A 235 HNNLTD-------------TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVL 300 (390)
T ss_dssp SSCCCC-------------CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEE
T ss_pred CCCCcc-------------cHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEE
Confidence 555421 1345556666666666666666666666666666666666666653 45555566667777
Q ss_pred eCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeeee
Q 046265 348 DLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRG 417 (639)
Q Consensus 348 ~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~g 417 (639)
++++|++. .+|..+..+++|+.|++++|.+.... +..++.|+.|++++|+++.
T Consensus 301 ~L~~n~l~----~~~~~~~~l~~L~~L~L~~N~i~~~~-------------~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 301 DLSHNHLL----HVERNQPQFDRLENLYLDHNSIVTLK-------------LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp ECCSSCCC----CCGGGHHHHTTCSEEECCSSCCCCCC-------------CCTTCCCSEEECCSSCEEH
T ss_pred ECCCCcce----ecCccccccCcCCEEECCCCccceeC-------------chhhccCCEEEcCCCCccc
Confidence 77665432 34555666666777777666654321 3455667777777777665
No 48
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=8e-35 Score=299.46 Aligned_cols=172 Identities=21% Similarity=0.314 Sum_probs=145.5
Q ss_pred hccCCCcceeccCCCceEEEEEcC------CCcEEEEEEccCCCCChhhHHHHHHHHHHHhcccc-CceeeeEEEEEcC-
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP------SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRH-RNVVKFYGFSFHP- 535 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~~~~~~~- 535 (639)
.++|+..+.||+|+||+||+|... +++.||||++.... .....+.|.+|+.++++++| ||||+++|+|.++
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 367888899999999999999653 24689999997643 33446779999999999976 8999999999765
Q ss_pred CceeEEecccCCCChhHHhhcCCC-------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee
Q 046265 536 RQSFLLYEYLGRGSLAIILSNDAA-------------IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL 602 (639)
Q Consensus 536 ~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill 602 (639)
+..|+|||||++|+|.++++.... ...++|..+..++.|||+||+|||+. +||||||||+|||+
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl 218 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILL 218 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceee
Confidence 568999999999999999975321 23589999999999999999999999 99999999999999
Q ss_pred CCCCceEEccccccccCCCCCC--CcceeeeeceeeCCC
Q 046265 603 GLDYDAHVSDFGISKFLKPDSS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 603 ~~~~~~kl~DfGla~~~~~~~~--~~~~~~gt~~Y~APE 639 (639)
++++.+||+|||+|+.+..... .....+||+.|||||
T Consensus 219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE 257 (353)
T 4ase_A 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 257 (353)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHH
T ss_pred CCCCCEEECcchhhhhcccCCCceeeccccccccccCHH
Confidence 9999999999999997754433 233578999999998
No 49
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=7.5e-33 Score=292.35 Aligned_cols=307 Identities=23% Similarity=0.255 Sum_probs=221.2
Q ss_pred eEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeec
Q 046265 8 FFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYC 87 (639)
Q Consensus 8 ~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 87 (639)
...+++++|.+....+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+++++|++|++++
T Consensus 47 l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 126 (390)
T 3o6n_A 47 QKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLER 126 (390)
T ss_dssp CSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCC
Confidence 34567788877765555678999999999999999988888999999999999999999987788899999999999999
Q ss_pred ccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCC
Q 046265 88 NGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQ 167 (639)
Q Consensus 88 N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 167 (639)
|+++...+..|.++++| ++|++++|++++..|..+..+++|++|++++|++++. .++.++
T Consensus 127 n~l~~l~~~~~~~l~~L-----------------~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~ 186 (390)
T 3o6n_A 127 NDLSSLPRGIFHNTPKL-----------------TTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIP 186 (390)
T ss_dssp SCCCCCCTTTTTTCTTC-----------------CEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCT
T ss_pred CccCcCCHHHhcCCCCC-----------------cEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---cccccc
Confidence 99995555556666633 5999999999988888899999999999999999864 367789
Q ss_pred cccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccc
Q 046265 168 SLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHL 247 (639)
Q Consensus 168 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 247 (639)
+|+.|++++|.+++. ....+| +.|++++|.+... |.. ..++|+.|++++|.+
T Consensus 187 ~L~~L~l~~n~l~~~-----~~~~~L--------------------~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l 238 (390)
T 3o6n_A 187 SLFHANVSYNLLSTL-----AIPIAV--------------------EELDASHNSINVV-RGP--VNVELTILKLQHNNL 238 (390)
T ss_dssp TCSEEECCSSCCSEE-----ECCSSC--------------------SEEECCSSCCCEE-ECC--CCSSCCEEECCSSCC
T ss_pred ccceeeccccccccc-----CCCCcc--------------------eEEECCCCeeeec-ccc--ccccccEEECCCCCC
Confidence 999999999988743 222344 4555555555332 221 235666666666666
Q ss_pred cCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccC
Q 046265 248 TGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNG 327 (639)
Q Consensus 248 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~ 327 (639)
++. ..+..+++|++|++++|.+ ++..|..+..+++|+.|++++|++.+ +|..+..+++|+.|++++
T Consensus 239 ~~~--~~l~~l~~L~~L~Ls~n~l-----------~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~ 304 (390)
T 3o6n_A 239 TDT--AWLLNYPGLVEVDLSYNEL-----------EKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSH 304 (390)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCC-----------CEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCS
T ss_pred ccc--HHHcCCCCccEEECCCCcC-----------CCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCC
Confidence 653 3456666666666554443 33455666666666677776666653 344555666677777777
Q ss_pred ccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCce
Q 046265 328 NKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEE 383 (639)
Q Consensus 328 N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~ 383 (639)
|++. .+|..+..+++|+.|++++|++..+ | +..+++|+.|++++|.+..
T Consensus 305 n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~----~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 305 NHLL-HVERNQPQFDRLENLYLDHNSIVTL----K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp SCCC-CCGGGHHHHTTCSEEECCSSCCCCC----C--CCTTCCCSEEECCSSCEEH
T ss_pred Ccce-ecCccccccCcCCEEECCCCcccee----C--chhhccCCEEEcCCCCccc
Confidence 7666 4555566667777777777554332 2 4556667777777776654
No 50
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-32 Score=295.78 Aligned_cols=327 Identities=19% Similarity=0.188 Sum_probs=259.0
Q ss_pred CcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccC
Q 046265 16 NTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLP 95 (639)
Q Consensus 16 n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 95 (639)
....+..+.+++++++|++|++++|.+++. | +++.+++|++|+|++|++++ +| ++.+++|++|++++|++++. |
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~ 101 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D 101 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C
T ss_pred cCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e
Confidence 344556677889999999999999999964 6 79999999999999999996 45 89999999999999999874 2
Q ss_pred ccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcc
Q 046265 96 SSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFD 175 (639)
Q Consensus 96 ~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 175 (639)
+++++ +| ++|++++|++++ +| ++.+++|++|++++|++++. | ++.+++|++|+++
T Consensus 102 --~~~l~---------------~L--~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~ 156 (457)
T 3bz5_A 102 --VTPLT---------------KL--TYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCH 156 (457)
T ss_dssp --CTTCT---------------TC--CEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECT
T ss_pred --cCCCC---------------cC--CEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECC
Confidence 55555 33 699999999996 45 88999999999999999974 3 8899999999999
Q ss_pred cCcCCccCCccCcCCCCCCeEEccCCcccc-ccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhh
Q 046265 176 LNLLNGVLPPSISNLSNLEGLYLYSSLVSA-EIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEV 254 (639)
Q Consensus 176 ~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 254 (639)
+|...+.+ .+..+++|+.|+++.+.+.. .+..+++|+.|++++|++.+. .+..+++|+.|++++|++++. |
T Consensus 157 ~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p-- 228 (457)
T 3bz5_A 157 LNKKITKL--DVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D-- 228 (457)
T ss_dssp TCSCCCCC--CCTTCTTCCEEECCSSCCCCCCCTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--
T ss_pred CCCccccc--ccccCCcCCEEECCCCccceeccccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--
Confidence 99766666 47889999999998765532 377889999999999999775 388899999999999999984 4
Q ss_pred hhcCCCccEEeccCCcccccccCcCCccccccCccccCCC-------CCCEEeccCCcccccCCccccCCCCCCeeeccC
Q 046265 255 FGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLY-------QLHKLDFSLNHIVGELPIELGNLKSLNYRALNG 327 (639)
Q Consensus 255 ~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~-------~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~ 327 (639)
++.+++|+.|++++|++.+ ..+..+..+. +|+.|++++|.+.+.+| +..+++|+.|++++
T Consensus 229 ~~~l~~L~~L~l~~N~l~~-----------~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~ 295 (457)
T 3bz5_A 229 VTPLTQLTYFDCSVNPLTE-----------LDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTH 295 (457)
T ss_dssp CTTCTTCSEEECCSSCCSC-----------CCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTT
T ss_pred ccccCCCCEEEeeCCcCCC-----------cCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCC
Confidence 7888999999988887754 2222333333 56777888887777766 46788999999999
Q ss_pred ccCcccCCcC--------ccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhh
Q 046265 328 NKVYGSLPRV--------LGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLI 399 (639)
Q Consensus 328 N~l~~~~p~~--------~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~ 399 (639)
|...+.+|.. +..+++|+.|++++|++.. ++ +..+++|+.|++++|.+++ +
T Consensus 296 n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~----l~--l~~l~~L~~L~l~~N~l~~-l-------------- 354 (457)
T 3bz5_A 296 NTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTE----LD--VSHNTKLKSLSCVNAHIQD-F-------------- 354 (457)
T ss_dssp CTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSC----CC--CTTCTTCSEEECCSSCCCB-C--------------
T ss_pred CcccceeccCCCcceEechhhcccCCEEECCCCcccc----cc--cccCCcCcEEECCCCCCCC-c--------------
Confidence 9887777642 4556677888888755433 22 6777888888888887664 1
Q ss_pred hhcccCcEEccCCCeeeee
Q 046265 400 SRMHGLSCIDISYNELRGL 418 (639)
Q Consensus 400 ~~l~~L~~ldls~N~l~g~ 418 (639)
+.|..++++.|.++|.
T Consensus 355 ---~~L~~L~l~~n~l~g~ 370 (457)
T 3bz5_A 355 ---SSVGKIPALNNNFEAE 370 (457)
T ss_dssp ---TTGGGSSGGGTSEEEE
T ss_pred ---cccccccccCCcEEec
Confidence 2355567788888775
No 51
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.9e-32 Score=296.04 Aligned_cols=320 Identities=27% Similarity=0.388 Sum_probs=262.9
Q ss_pred eeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEee
Q 046265 6 FFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVL 85 (639)
Q Consensus 6 ~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 85 (639)
-.+..+++++|++.+..| +.++++|++|++++|.+++..| ++.+++|++|++++|++++ +|. +.++++|++|++
T Consensus 68 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~-~~~-~~~l~~L~~L~l 141 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITD-IDP-LKNLTNLNRLEL 141 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CGG-GTTCTTCSEEEE
T ss_pred cCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCC-ChH-HcCCCCCCEEEC
Confidence 456788999999887654 9999999999999999986554 9999999999999999985 454 999999999999
Q ss_pred ecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccC
Q 046265 86 YCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGK 165 (639)
Q Consensus 86 ~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 165 (639)
++|.+++. + .++.+++| ++|+++ |.+.+. + .+.++++|++|++++|.+++. ..+..
T Consensus 142 ~~n~l~~~-~-~~~~l~~L-----------------~~L~l~-~~~~~~-~-~~~~l~~L~~L~l~~n~l~~~--~~l~~ 197 (466)
T 1o6v_A 142 SSNTISDI-S-ALSGLTSL-----------------QQLSFG-NQVTDL-K-PLANLTTLERLDISSNKVSDI--SVLAK 197 (466)
T ss_dssp EEEEECCC-G-GGTTCTTC-----------------SEEEEE-ESCCCC-G-GGTTCTTCCEEECCSSCCCCC--GGGGG
T ss_pred CCCccCCC-h-hhccCCcc-----------------cEeecC-CcccCc-h-hhccCCCCCEEECcCCcCCCC--hhhcc
Confidence 99998853 3 35555533 477776 455533 3 278899999999999998753 34788
Q ss_pred CCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccc--cccccccCCcEEEcCCcccCCCCCccccCCCCCceeccc
Q 046265 166 VQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVS--AEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLE 243 (639)
Q Consensus 166 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~--~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 243 (639)
+++|++|++++|.+++..| ++.+++|+.|+++.+.+. ..+..+++|+.|++++|.+.+..| +..+++|+.|+++
T Consensus 198 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~ 273 (466)
T 1o6v_A 198 LTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLG 273 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECC
T ss_pred CCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccchhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECC
Confidence 8999999999999987655 677889999999876554 357788999999999999977655 8899999999999
Q ss_pred cccccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCee
Q 046265 244 QNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYR 323 (639)
Q Consensus 244 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L 323 (639)
+|.+++..+ +..+++|+.|++++|++. + ++. +..+++|+.|++++|++.+..| +..+++|+.|
T Consensus 274 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~-----------~-~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 274 ANQISNISP--LAGLTALTNLELNENQLE-----------D-ISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp SSCCCCCGG--GTTCTTCSEEECCSSCCS-----------C-CGG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred CCccCcccc--ccCCCccCeEEcCCCccc-----------C-chh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 999998665 788999999998887763 2 222 7788999999999999987765 7889999999
Q ss_pred eccCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCce
Q 046265 324 ALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEE 383 (639)
Q Consensus 324 ~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~ 383 (639)
++++|++++. ..+..+++|+.|++++|++ .+..| +..+++|+.|++++|.+.+
T Consensus 337 ~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l---~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 337 FFYNNKVSDV--SSLANLTNINWLSAGHNQI---SDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp ECCSSCCCCC--GGGTTCTTCCEEECCSSCC---CBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred ECCCCccCCc--hhhccCCCCCEEeCCCCcc---Cccch--hhcCCCCCEEeccCCcccC
Confidence 9999999865 4688999999999999654 44444 8889999999999998876
No 52
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=9.9e-33 Score=307.46 Aligned_cols=300 Identities=22% Similarity=0.240 Sum_probs=198.9
Q ss_pred EEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecc
Q 046265 9 FQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCN 88 (639)
Q Consensus 9 ~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 88 (639)
..+++++|.+....+..+.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 54 ~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 133 (597)
T 3oja_B 54 KIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERN 133 (597)
T ss_dssp SEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCC
Confidence 45677788777666667889999999999999999888889999999999999999999888888999999999999999
Q ss_pred cCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCc
Q 046265 89 GLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQS 168 (639)
Q Consensus 89 ~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 168 (639)
.+++..+..|+++++| ++|+|++|.+++..|..|+.+++|++|+|++|.+++. + ++.+++
T Consensus 134 ~l~~l~~~~~~~l~~L-----------------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~--~~~l~~ 193 (597)
T 3oja_B 134 DLSSLPRGIFHNTPKL-----------------TTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-D--LSLIPS 193 (597)
T ss_dssp CCCCCCTTTTTTCTTC-----------------CEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-C--GGGCTT
T ss_pred CCCCCCHHHhccCCCC-----------------CEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-C--hhhhhh
Confidence 9997666666777643 5999999999998888999999999999999999864 3 567889
Q ss_pred ccEEEcccCcCCccCCccCcCCCCCCeEEccCCcccccc-ccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccc
Q 046265 169 LLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEI-GNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHL 247 (639)
Q Consensus 169 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~-~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 247 (639)
|+.|++++|.+++. ....+|+.|+++.+.+.... ...++|+.|++++|.+.+ +.++..+++|+.|++++|.+
T Consensus 194 L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l 266 (597)
T 3oja_B 194 LFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNEL 266 (597)
T ss_dssp CSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCC
T ss_pred hhhhhcccCccccc-----cCCchhheeeccCCcccccccccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCcc
Confidence 99999999998753 23345666666554432111 112345555555555443 23444444555555555555
Q ss_pred cCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccC
Q 046265 248 TGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNG 327 (639)
Q Consensus 248 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~ 327 (639)
++..|..|+.+++|+.|+|++|.+. .+|..+..+++|+.|+|++|.+. .+|..+..+++|+.|++++
T Consensus 267 ~~~~~~~~~~l~~L~~L~Ls~N~l~------------~l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~ 333 (597)
T 3oja_B 267 EKIMYHPFVKMQRLERLYISNNRLV------------ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDH 333 (597)
T ss_dssp CEEESGGGTTCSSCCEEECTTSCCC------------EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCS
T ss_pred CCCCHHHhcCccCCCEEECCCCCCC------------CCCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCC
Confidence 4444444444444444444444331 12333334444444444444444 3344444444444444444
Q ss_pred ccCcccCCcCccCCCCCCEEeCCC
Q 046265 328 NKVYGSLPRVLGSISDLEYLDLST 351 (639)
Q Consensus 328 N~l~~~~p~~~~~l~~L~~L~Ls~ 351 (639)
|.+.+. | +..+++|+.|++++
T Consensus 334 N~l~~~-~--~~~~~~L~~L~l~~ 354 (597)
T 3oja_B 334 NSIVTL-K--LSTHHTLKNLTLSH 354 (597)
T ss_dssp SCCCCC-C--CCTTCCCSEEECCS
T ss_pred CCCCCc-C--hhhcCCCCEEEeeC
Confidence 444322 1 23344444444444
No 53
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.6e-34 Score=298.96 Aligned_cols=168 Identities=20% Similarity=0.330 Sum_probs=144.6
Q ss_pred ccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEc------CCc
Q 046265 465 NNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH------PRQ 537 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~ 537 (639)
++|+..+.||+|+||+||+|. ..+|+.||||+++.........+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 568888999999999999995 4678999999998765555556778899999999999999999998764 357
Q ss_pred eeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 538 SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
+|+|||||+ |+|.+++...+ .+++..+..++.|++.||+|||.. +||||||||+|||++.++.+||+|||+|+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~ 206 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMAR 206 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceee
Confidence 899999996 67999997654 478899999999999999999999 99999999999999999999999999998
Q ss_pred cCCCC----CCCcceeeeeceeeCCC
Q 046265 618 FLKPD----SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~----~~~~~~~~gt~~Y~APE 639 (639)
.+... .....+.+||+.|||||
T Consensus 207 ~~~~~~~~~~~~~~~~~GT~~Y~APE 232 (398)
T 4b99_A 207 GLCTSPAEHQYFMTEYVATRWYRAPE 232 (398)
T ss_dssp CC-------CCCCCSSCCCCTTCCHH
T ss_pred ecccCccccccccccceeChHhcCHH
Confidence 76432 12345679999999998
No 54
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.9e-33 Score=287.24 Aligned_cols=248 Identities=30% Similarity=0.495 Sum_probs=123.1
Q ss_pred CCCEEECcCCCCcc--CCCCCCCCCCCCCEEEccc-CcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcc
Q 046265 31 NLKFLDMGNNQLSG--VIPQEIDPLTHLKHLYINV-NKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIG 107 (639)
Q Consensus 31 ~L~~L~Ls~n~l~~--~~p~~~~~L~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~ 107 (639)
+++.|+|++|.+++ .+|..|+.+++|++|+|++ |.+++.+|..|+++++|++|+|++|++++.+|..|.++++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L--- 127 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL--- 127 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTC---
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCC---
Confidence 45555555555555 5555555555555555552 55555555555555555555555555555555555444422
Q ss_pred cCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCC-cccEEEcccCcCCccCCcc
Q 046265 108 SMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQ-SLLSLGFDLNLLNGVLPPS 186 (639)
Q Consensus 108 ~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~ 186 (639)
++|+|++|++++.+|..+..+++|++|+|++|++++.+|..++.++ +|+.|++++|.+++.+|..
T Consensus 128 --------------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~ 193 (313)
T 1ogq_A 128 --------------VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT 193 (313)
T ss_dssp --------------CEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGG
T ss_pred --------------CEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChH
Confidence 3555555555555555555555555555555555555555555554 5555555555555444443
Q ss_pred CcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEec
Q 046265 187 ISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDL 266 (639)
Q Consensus 187 ~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 266 (639)
+..+ . |+.|++++|.+.+.+|..+..+++|+.|++++|.+++.++. +..+++|++|++
T Consensus 194 ~~~l--------------------~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L 251 (313)
T 1ogq_A 194 FANL--------------------N-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDL 251 (313)
T ss_dssp GGGC--------------------C-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEEC
T ss_pred HhCC--------------------c-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEEC
Confidence 3221 1 33444444444444444455555555555555555443333 334444444443
Q ss_pred cCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCcc
Q 046265 267 SQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNK 329 (639)
Q Consensus 267 s~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~ 329 (639)
++|++ ++.+|..+..+++|+.|++++|++++.+|.. ..+++|+.+++++|.
T Consensus 252 s~N~l-----------~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 252 RNNRI-----------YGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CSSCC-----------EECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred cCCcc-----------cCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 33322 2334444444444444444444444444433 344444444444443
No 55
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=4.5e-32 Score=279.80 Aligned_cols=289 Identities=23% Similarity=0.271 Sum_probs=173.5
Q ss_pred CCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCC
Q 046265 31 NLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMP 110 (639)
Q Consensus 31 ~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp 110 (639)
+++.++++++.++ .+|..+. ++|++|++++|.+++..|..|.++++|++|++++|++++..|..|+++++|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L------ 104 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKL------ 104 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTC------
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCC------
Confidence 6888888888887 6676664 688888888888886667778888888888888888887777777777633
Q ss_pred CCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCC--ccCCccCc
Q 046265 111 NSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLN--GVLPPSIS 188 (639)
Q Consensus 111 ~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~p~~~~ 188 (639)
++|++++|+++ .+|..+. ++|++|++++|++++..+..|..+++|+.|++++|.++ +..|..+.
T Consensus 105 -----------~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 170 (332)
T 2ft3_A 105 -----------QKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFD 170 (332)
T ss_dssp -----------CEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSC
T ss_pred -----------CEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCccccc
Confidence 47888888887 5666554 78888888888888666667888888888888888885 35555555
Q ss_pred CCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccC
Q 046265 189 NLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQ 268 (639)
Q Consensus 189 ~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 268 (639)
.+ +|+.|+++ +|++.+ +|..+. ++|+.|++++|.+++..+..+..+++|+.|++++
T Consensus 171 ~l-~L~~L~l~--------------------~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~ 226 (332)
T 2ft3_A 171 GL-KLNYLRIS--------------------EAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGH 226 (332)
T ss_dssp SC-CCSCCBCC--------------------SSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCS
T ss_pred CC-ccCEEECc--------------------CCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCC
Confidence 55 55555444 344332 232222 3444555555555544444444445555544433
Q ss_pred CcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccC------CC
Q 046265 269 NNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGS------IS 342 (639)
Q Consensus 269 N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~------l~ 342 (639)
|++ ++..|..+..+++|+.|++++|++. .+|..+..+++|+.|++++|++++..+..|.. ..
T Consensus 227 N~l-----------~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 294 (332)
T 2ft3_A 227 NQI-----------RMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRA 294 (332)
T ss_dssp SCC-----------CCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSC
T ss_pred CcC-----------CcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccc
Confidence 333 2223334444455555555555554 44444555555555555555554433333332 23
Q ss_pred CCCEEeCCCCCCCcccccCChhhhccccCCeeeccCC
Q 046265 343 DLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVIT 379 (639)
Q Consensus 343 ~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n 379 (639)
+|+.|++++|.+... ...|..+..++.|+.+++++|
T Consensus 295 ~l~~L~l~~N~~~~~-~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 295 YYNGISLFNNPVPYW-EVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp CBSEEECCSSSSCGG-GSCGGGGTTBCCSTTEEC---
T ss_pred cccceEeecCccccc-ccCcccccccchhhhhhcccc
Confidence 455666665542211 233445555666666666554
No 56
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.2e-33 Score=285.65 Aligned_cols=249 Identities=28% Similarity=0.475 Sum_probs=213.4
Q ss_pred CCCCEEEcccCcCCC--CCCcccCCCCCCCEEeeec-ccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCc
Q 046265 54 THLKHLYINVNKLRG--SVPREVGQLSSLKQLVLYC-NGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQ 130 (639)
Q Consensus 54 ~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~ 130 (639)
.+++.|+|++|.+++ .+|..|+++++|++|++++ |.+.+.+|..|+++++| ++|+|++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L-----------------~~L~Ls~n~ 112 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQL-----------------HYLYITHTN 112 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTC-----------------SEEEEEEEC
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCC-----------------CEEECcCCe
Confidence 689999999999998 8999999999999999995 99999899888887744 589999999
Q ss_pred CcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccc
Q 046265 131 LSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNL 210 (639)
Q Consensus 131 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l 210 (639)
+++.+|..|.++++|++|+|++|.+++.+|..+..+++|++|++++|.+++.+|..+..++
T Consensus 113 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~------------------- 173 (313)
T 1ogq_A 113 VSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFS------------------- 173 (313)
T ss_dssp CEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCC-------------------
T ss_pred eCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhh-------------------
Confidence 9999999999999999999999999999999999999999999999999988887766543
Q ss_pred cCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccc
Q 046265 211 LQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKI 290 (639)
Q Consensus 211 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~ 290 (639)
++|+.|++++|++.+.+|..+..++ |+.|++++|.+++..+..+..+++|+.|++++|.+. +.+|. +
T Consensus 174 ~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-----------~~~~~-~ 240 (313)
T 1ogq_A 174 KLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA-----------FDLGK-V 240 (313)
T ss_dssp TTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEEC-----------CBGGG-C
T ss_pred hcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCcee-----------eecCc-c
Confidence 1466777788888888888888887 999999999999888888888899999997777663 33443 6
Q ss_pred cCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCC
Q 046265 291 GKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTN 352 (639)
Q Consensus 291 ~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 352 (639)
..+++|+.|++++|++.+.+|..+..+++|+.|++++|+++|.+|.. +.+++|+.|++++|
T Consensus 241 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N 301 (313)
T 1ogq_A 241 GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANN 301 (313)
T ss_dssp CCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSS
T ss_pred cccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCC
Confidence 77788888888888888888888888888888888888888888875 77888888888886
No 57
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.5e-31 Score=275.69 Aligned_cols=287 Identities=18% Similarity=0.238 Sum_probs=138.5
Q ss_pred CCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCC
Q 046265 31 NLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMP 110 (639)
Q Consensus 31 ~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp 110 (639)
++++++++++.++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|++++..|..|.++++|
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L------ 102 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL------ 102 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTC------
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCC------
Confidence 4555666655555 3444433 455556666666554444455556666666666665555555555544422
Q ss_pred CCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCc--cCCccCc
Q 046265 111 NSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNG--VLPPSIS 188 (639)
Q Consensus 111 ~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~ 188 (639)
++|++++|+++ .+|..+. ++|++|++++|.+++..+..+..+++|+.|++++|.+.. ..+..+.
T Consensus 103 -----------~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 168 (330)
T 1xku_A 103 -----------ERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 168 (330)
T ss_dssp -----------CEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGG
T ss_pred -----------CEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhcc
Confidence 35566666555 3444332 456666666666555444455556666666666665532 3333333
Q ss_pred CCCCCCeEEccCCccc---cccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEe
Q 046265 189 NLSNLEGLYLYSSLVS---AEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLD 265 (639)
Q Consensus 189 ~l~~L~~L~l~~~~~~---~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 265 (639)
.+++|+.|+++.+.+. ..+ .++|+.|++++|++.+..|..+..+++|+.|++++|.+++..+..+..+++|++|+
T Consensus 169 ~l~~L~~L~l~~n~l~~l~~~~--~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 246 (330)
T 1xku_A 169 GMKKLSYIRIADTNITTIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELH 246 (330)
T ss_dssp GCTTCCEEECCSSCCCSCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEE
T ss_pred CCCCcCEEECCCCccccCCccc--cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEE
Confidence 3333333322221110 000 12344444444444444444444555555555555555444444444444444444
Q ss_pred ccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccC-----
Q 046265 266 LSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGS----- 340 (639)
Q Consensus 266 Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~----- 340 (639)
+++|++. .+|..+..+++|+.|++++|++++..+..|..
T Consensus 247 -----------------------------------L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~ 290 (330)
T 1xku_A 247 -----------------------------------LNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNT 290 (330)
T ss_dssp -----------------------------------CCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCT
T ss_pred -----------------------------------CCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCccccc
Confidence 4444444 34444444444444555444444333333322
Q ss_pred -CCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCC
Q 046265 341 -ISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVIT 379 (639)
Q Consensus 341 -l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n 379 (639)
...|+.|++++|.+... ...|..+..+..++.+++++|
T Consensus 291 ~~~~l~~l~l~~N~~~~~-~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 291 KKASYSGVSLFSNPVQYW-EIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp TSCCCSEEECCSSSSCGG-GSCGGGGTTCCCGGGEEC---
T ss_pred ccccccceEeecCccccc-ccCccccccccceeEEEeccc
Confidence 24566666666543322 223455556666666666655
No 58
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.4e-31 Score=278.07 Aligned_cols=308 Identities=23% Similarity=0.320 Sum_probs=199.2
Q ss_pred cccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCC
Q 046265 25 QIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNL 104 (639)
Q Consensus 25 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 104 (639)
.+..+++|++|++++|.+.. +| .+..+++|++|++++|++++ +|. +..+++|++|++++|.++. +| .+.+++
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~-- 110 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLT-- 110 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCT--
T ss_pred cchhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-ch-HHcCCC--
Confidence 35578889999999999974 45 48889999999999999984 555 8999999999999998875 22 455555
Q ss_pred CcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCC
Q 046265 105 AIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLP 184 (639)
Q Consensus 105 ~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 184 (639)
+| ++|++++|.+++ +|. +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+
T Consensus 111 -------------~L--~~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~ 172 (347)
T 4fmz_A 111 -------------NL--RELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP 172 (347)
T ss_dssp -------------TC--SEEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG
T ss_pred -------------cC--CEEECcCCcccC-chh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh
Confidence 33 589999999884 444 7889999999999997665544 48889999999999998875433
Q ss_pred ccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEE
Q 046265 185 PSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFL 264 (639)
Q Consensus 185 ~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 264 (639)
+..+++|+ .|++++|.+.+. +. +..+++|+.|++++|.+++..+ +..+++|+.|
T Consensus 173 --~~~l~~L~--------------------~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L 226 (347)
T 4fmz_A 173 --IANLTDLY--------------------SLSLNYNQIEDI-SP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSL 226 (347)
T ss_dssp --GGGCTTCS--------------------EEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEE
T ss_pred --hccCCCCC--------------------EEEccCCccccc-cc-ccCCCccceeecccCCCCCCch--hhcCCcCCEE
Confidence 44455555 445555554332 22 5555666666666666655433 5555666666
Q ss_pred eccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCC
Q 046265 265 DLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDL 344 (639)
Q Consensus 265 ~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 344 (639)
++++|.+. .+|. +..+++|+.|++++|.+.+. ..+..+++|+.|++++|++++. ..+..+++|
T Consensus 227 ~l~~n~l~------------~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L 289 (347)
T 4fmz_A 227 KIGNNKIT------------DLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQL 289 (347)
T ss_dssp ECCSSCCC------------CCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTC
T ss_pred EccCCccC------------CCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCC
Confidence 65555442 1222 55556666666666665532 3455666666666666666542 235566666
Q ss_pred CEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeee
Q 046265 345 EYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELR 416 (639)
Q Consensus 345 ~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~ 416 (639)
+.|++++|+ +.+..|..+..+++|+.|++++|.+.+.. . +..++.|+.+|+++|+++
T Consensus 290 ~~L~L~~n~---l~~~~~~~l~~l~~L~~L~L~~n~l~~~~-----------~-~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 290 NSLFLNNNQ---LGNEDMEVIGGLTNLTTLFLSQNHITDIR-----------P-LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SEEECCSSC---CCGGGHHHHHTCTTCSEEECCSSSCCCCG-----------G-GGGCTTCSEESSSCC---
T ss_pred CEEECcCCc---CCCcChhHhhccccCCEEEccCCcccccc-----------C-hhhhhccceeehhhhccc
Confidence 666666643 33334455666666666666666655422 1 455666777777777654
No 59
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.6e-33 Score=305.52 Aligned_cols=168 Identities=21% Similarity=0.231 Sum_probs=142.5
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCC-hhhHHHH---HHHHHHHhccccCceeeeEEEEEcCCce
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPD-MVVQQAF---SNEIKALTELRHRNVVKFYGFSFHPRQS 538 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~---~~e~~~l~~l~H~niv~l~~~~~~~~~~ 538 (639)
.++|+..++||+|+||+||+|+. .+|+.||||++.+.... ......+ ..++.+++.++|||||+++++|.+++.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 46799999999999999999954 57899999999743211 1111222 3446777888999999999999999999
Q ss_pred eEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccccccc
Q 046265 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKF 618 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~ 618 (639)
|+|||||+||+|.+++...+ .+++..+..++.||+.||+|||.. +||||||||+|||++.+|.+||+|||+|+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 99999999999999998654 477899999999999999999998 999999999999999999999999999998
Q ss_pred CCCCCCCcceeeeeceeeCCC
Q 046265 619 LKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 619 ~~~~~~~~~~~~gt~~Y~APE 639 (639)
+... ...+.+||+.|||||
T Consensus 342 ~~~~--~~~t~~GTp~YmAPE 360 (689)
T 3v5w_A 342 FSKK--KPHASVGTHGYMAPE 360 (689)
T ss_dssp CSSC--CCCSCCSCGGGCCHH
T ss_pred cCCC--CCCCccCCcCccCHH
Confidence 7543 234579999999998
No 60
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.3e-33 Score=289.41 Aligned_cols=170 Identities=25% Similarity=0.282 Sum_probs=142.8
Q ss_pred HHHHHHHhccCCCcceeccCCCceEEEEEc----CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEE
Q 046265 457 YEEVIRATNNFDAKYCIGTAGQASVYKAEL----PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGF 531 (639)
Q Consensus 457 ~~~~~~~~~~f~~~~~ig~g~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~ 531 (639)
++++....+.|+..+.||+|+||+||+|+. .+++.||||++.... ....+.+|+++++++ +|||||+++++
T Consensus 13 ~~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~ 88 (361)
T 4f9c_A 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYC 88 (361)
T ss_dssp HHHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEE
T ss_pred HHhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEE
Confidence 444555678899999999999999999964 246789999987533 234578899999988 69999999999
Q ss_pred EEcCCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC-CceEE
Q 046265 532 SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD-YDAHV 610 (639)
Q Consensus 532 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~-~~~kl 610 (639)
+.+.+..|+|||||++|+|.+++. .+++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||
T Consensus 89 ~~~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl 159 (361)
T 4f9c_A 89 FRKNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYAL 159 (361)
T ss_dssp EEETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred EEECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEE
Confidence 999999999999999999999984 377889999999999999999999 99999999999999876 79999
Q ss_pred ccccccccCCCCC----------------------------CCcceeeeeceeeCCC
Q 046265 611 SDFGISKFLKPDS----------------------------SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 611 ~DfGla~~~~~~~----------------------------~~~~~~~gt~~Y~APE 639 (639)
+|||+|+...... ....+.+||++|||||
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 216 (361)
T 4f9c_A 160 VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPE 216 (361)
T ss_dssp CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHH
T ss_pred CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHH
Confidence 9999998654221 1123468999999998
No 61
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.9e-31 Score=275.54 Aligned_cols=300 Identities=25% Similarity=0.411 Sum_probs=192.3
Q ss_pred eEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeec
Q 046265 8 FFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYC 87 (639)
Q Consensus 8 ~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 87 (639)
+..++++++.+.. +| .+..+++|++|++++|.+++. |. +..+++|++|++++|.++. +| .+..+++|++|++++
T Consensus 46 L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~ 119 (347)
T 4fmz_A 46 ITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNE 119 (347)
T ss_dssp CSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTT
T ss_pred ccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcC
Confidence 4677888888864 44 489999999999999999854 44 9999999999999999984 54 699999999999999
Q ss_pred ccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCC
Q 046265 88 NGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQ 167 (639)
Q Consensus 88 N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 167 (639)
|++++..+ +..++ +| ++|++++|.....++ .+..+++|++|++++|.+.+..+ +..++
T Consensus 120 n~i~~~~~--~~~l~---------------~L--~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~ 177 (347)
T 4fmz_A 120 DNISDISP--LANLT---------------KM--YSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLT 177 (347)
T ss_dssp SCCCCCGG--GTTCT---------------TC--CEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCT
T ss_pred CcccCchh--hccCC---------------ce--eEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCC
Confidence 99985433 55555 33 699999996664544 48999999999999999986443 88999
Q ss_pred cccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccc
Q 046265 168 SLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHL 247 (639)
Q Consensus 168 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 247 (639)
+|+.|++++|.+.+..+ +..+++|+.++++ +|.+.+..+ +..+++|+.|++++|.+
T Consensus 178 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~--------------------~n~l~~~~~--~~~~~~L~~L~l~~n~l 233 (347)
T 4fmz_A 178 DLYSLSLNYNQIEDISP--LASLTSLHYFTAY--------------------VNQITDITP--VANMTRLNSLKIGNNKI 233 (347)
T ss_dssp TCSEEECTTSCCCCCGG--GGGCTTCCEEECC--------------------SSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred CCCEEEccCCccccccc--ccCCCccceeecc--------------------cCCCCCCch--hhcCCcCCEEEccCCcc
Confidence 99999999999875432 5555666555555 444433222 44444555555555555
Q ss_pred cCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccC
Q 046265 248 TGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNG 327 (639)
Q Consensus 248 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~ 327 (639)
++..+ +..+++|++|++++|.+.+ + +.+..+++|+.|++++|.+.+. ..+..+++|+.|++++
T Consensus 234 ~~~~~--~~~l~~L~~L~l~~n~l~~------------~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~ 296 (347)
T 4fmz_A 234 TDLSP--LANLSQLTWLEIGTNQISD------------I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNN 296 (347)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCC------------C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCS
T ss_pred CCCcc--hhcCCCCCEEECCCCccCC------------C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcC
Confidence 44332 4444555555544444311 1 2344444555555555555432 2344455555555555
Q ss_pred ccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcC
Q 046265 328 NKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFW 381 (639)
Q Consensus 328 N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~ 381 (639)
|.+.+..|..++.+++|+.|++++|++.. ..| +..+++|+.+++++|.+
T Consensus 297 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~---~~~--~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 297 NQLGNEDMEVIGGLTNLTTLFLSQNHITD---IRP--LASLSKMDSADFANQVI 345 (347)
T ss_dssp SCCCGGGHHHHHTCTTCSEEECCSSSCCC---CGG--GGGCTTCSEESSSCC--
T ss_pred CcCCCcChhHhhccccCCEEEccCCcccc---ccC--hhhhhccceeehhhhcc
Confidence 55554444445555555555555533221 111 44455555555555543
No 62
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.98 E-value=9.5e-31 Score=280.71 Aligned_cols=335 Identities=26% Similarity=0.313 Sum_probs=184.3
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeee
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLY 86 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 86 (639)
....+++++|++.+ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|+++
T Consensus 72 ~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~ 139 (454)
T 1jl5_A 72 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVS 139 (454)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECC
T ss_pred CCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECc
Confidence 45778899999876 4442 3689999999999986 6754 4789999999999884 4432 1689999999
Q ss_pred cccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCC
Q 046265 87 CNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKV 166 (639)
Q Consensus 87 ~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 166 (639)
+|++++ +| +|+++++|+ +|++++|++++ +|..+ ++|++|++++|++++ +| .++.+
T Consensus 140 ~n~l~~-lp-~~~~l~~L~-----------------~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l 194 (454)
T 1jl5_A 140 NNQLEK-LP-ELQNSSFLK-----------------IIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNL 194 (454)
T ss_dssp SSCCSS-CC-CCTTCTTCC-----------------EEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTC
T ss_pred CCCCCC-Cc-ccCCCCCCC-----------------EEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCC
Confidence 999986 66 477777554 55555555542 33322 345555555555544 33 34555
Q ss_pred CcccEEEcccCcCCccCCccCcCCCCCCeEEccCCcc---ccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccc
Q 046265 167 QSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLV---SAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLE 243 (639)
Q Consensus 167 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~---~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 243 (639)
++|+.|++++|.+++ +|... ++|+.|+++.+.+ | .++.+++|+.|++++|++.+ +|.. +++|+.|+++
T Consensus 195 ~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~ 265 (454)
T 1jl5_A 195 PFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILEELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVR 265 (454)
T ss_dssp TTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECC
T ss_pred CCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCCccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECC
Confidence 555555555555543 22211 3455555543322 2 24445555555555555543 3321 2445555555
Q ss_pred cccccCcchhhhhcCCCccEEeccCCcccc---------cccCcCCccccccCccccCCCCCCEEeccCCcccccCCccc
Q 046265 244 QNHLTGNIYEVFGIYPNLTFLDLSQNNFYG---------SLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIEL 314 (639)
Q Consensus 244 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---------~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~ 314 (639)
+|++++. |. ..++|+.|++++|++.+ .+++++|++++ ++.. .++|+.|++++|++.+ +|..
T Consensus 266 ~N~l~~l-~~---~~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~-i~~~---~~~L~~L~Ls~N~l~~-lp~~- 335 (454)
T 1jl5_A 266 DNYLTDL-PE---LPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLIE-LPAL- 335 (454)
T ss_dssp SSCCSCC-CC---CCTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSE-ECCC---CTTCCEEECCSSCCSC-CCCC-
T ss_pred CCccccc-Cc---ccCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCc-ccCC---cCcCCEEECCCCcccc-cccc-
Confidence 5555542 21 12445555555555443 13455555554 2221 2489999999999986 6654
Q ss_pred cCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhcc-------------ccCCeeeccCCcC
Q 046265 315 GNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKL-------------VQLTELDLVITFW 381 (639)
Q Consensus 315 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l-------------~~L~~l~l~~n~~ 381 (639)
+++|+.|++++|+++ .+|. .+++|+.|++++|++..+. .+|.++..+ ++|+.|++++|.+
T Consensus 336 --~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~-~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l 408 (454)
T 1jl5_A 336 --PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFP-DIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPL 408 (454)
T ss_dssp --CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCC-CCCTTCCEEECCC----------------------
T ss_pred --CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCC-CChHHHHhhhhcccccccccccCcCCEEECCCCcC
Confidence 578999999999998 5676 4789999999997655432 578888887 7899999999998
Q ss_pred ce--eecCcchhhhhhhhhhhhcccCcEEccCCCeeeeeec
Q 046265 382 EE--RYRPKSVIWKAWRSLISRMHGLSCIDISYNELRGLIR 420 (639)
Q Consensus 382 ~~--~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~g~~p 420 (639)
.+ .+ | . .++.+++.+|.+.+.+|
T Consensus 409 ~~~~~i-P---------~------sl~~L~~~~~~~~~~~~ 433 (454)
T 1jl5_A 409 REFPDI-P---------E------SVEDLRMNSERVVDPYE 433 (454)
T ss_dssp -----------------------------------------
T ss_pred Cccccc-h---------h------hHhheeCcCcccCCccc
Confidence 86 44 3 1 25566788888877765
No 63
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=3.6e-30 Score=265.31 Aligned_cols=295 Identities=21% Similarity=0.214 Sum_probs=232.1
Q ss_pred CCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcc
Q 046265 54 THLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSG 133 (639)
Q Consensus 54 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~ 133 (639)
.+|+.++++++.++ .+|..+. ++|++|++++|++++..+..|.++++| ++|+|++|++++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L-----------------~~L~L~~n~l~~ 90 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNL-----------------HTLILINNKISK 90 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTC-----------------CEEECCSSCCCC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCC-----------------CEEECCCCcCCe
Confidence 47899999999998 6887765 689999999999998777788777743 599999999998
Q ss_pred cCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCC
Q 046265 134 SIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQL 213 (639)
Q Consensus 134 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L 213 (639)
..|..|.++++|++|+|++|+++ .+|..+. ++|++|++++|.+++..+..+..+++|+
T Consensus 91 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~------------------- 148 (330)
T 1xku_A 91 ISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMI------------------- 148 (330)
T ss_dssp BCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCC-------------------
T ss_pred eCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCcccc-------------------
Confidence 88999999999999999999998 5676554 7999999999999977666666555555
Q ss_pred cEEEcCCcccC--CCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCcccc
Q 046265 214 IELEIDNKQLF--GQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIG 291 (639)
Q Consensus 214 ~~L~l~~n~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~ 291 (639)
.|++++|.+. +..|..+.++++|+.|++++|.++..... + .++|++|++++|.+ ++..|..+.
T Consensus 149 -~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~-~--~~~L~~L~l~~n~l-----------~~~~~~~~~ 213 (330)
T 1xku_A 149 -VVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQG-L--PPSLTELHLDGNKI-----------TKVDAASLK 213 (330)
T ss_dssp -EEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSS-C--CTTCSEEECTTSCC-----------CEECTGGGT
T ss_pred -EEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcc-c--cccCCEEECCCCcC-----------CccCHHHhc
Confidence 4555555553 35667788888999999999988864432 2 37899999776665 455678889
Q ss_pred CCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCCh---hhhcc
Q 046265 292 KLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPV---ELEKL 368 (639)
Q Consensus 292 ~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~---~~~~l 368 (639)
.+++|+.|++++|.+.+..+..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|++..+....-. .....
T Consensus 214 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~ 292 (330)
T 1xku_A 214 GLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKK 292 (330)
T ss_dssp TCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTS
T ss_pred CCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCccccccc
Confidence 9999999999999999888888999999999999999998 7888999999999999999876655322110 11224
Q ss_pred ccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCe
Q 046265 369 VQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNE 414 (639)
Q Consensus 369 ~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~ 414 (639)
..++.+++++|.+... ...+..+..+..++.+|+++|+
T Consensus 293 ~~l~~l~l~~N~~~~~--------~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 293 ASYSGVSLFSNPVQYW--------EIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CCCSEEECCSSSSCGG--------GSCGGGGTTCCCGGGEEC----
T ss_pred ccccceEeecCccccc--------ccCccccccccceeEEEecccC
Confidence 6788999999976531 1122567788999999999985
No 64
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.97 E-value=6.2e-32 Score=296.78 Aligned_cols=168 Identities=21% Similarity=0.370 Sum_probs=147.8
Q ss_pred hccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.++|+..+.||+|+||+||+|. ..+|+.||||.+.... ....+.+.+|+.+|+.++|||||+++++|.+++..|+||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 3678889999999999999995 4678999999997643 344667889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC--CceEEccccccccCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD--YDAHVSDFGISKFLK 620 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~--~~~kl~DfGla~~~~ 620 (639)
|||+||+|.+++.... ..+++..+..++.|++.||+|||.. +|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 234 E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 234 EFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp ECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred eecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 9999999999986543 2578899999999999999999999 99999999999999854 899999999999876
Q ss_pred CCCCCcceeeeeceeeCCC
Q 046265 621 PDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~~~~~~gt~~Y~APE 639 (639)
.. ......+||+.|||||
T Consensus 309 ~~-~~~~~~~GT~~y~APE 326 (573)
T 3uto_A 309 PK-QSVKVTTGTAEFAAPE 326 (573)
T ss_dssp TT-SEEEEECSSGGGCCHH
T ss_pred CC-CceeeeEECccccCHH
Confidence 43 3345679999999998
No 65
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=5.5e-30 Score=264.19 Aligned_cols=291 Identities=22% Similarity=0.222 Sum_probs=231.9
Q ss_pred CCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcc
Q 046265 54 THLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSG 133 (639)
Q Consensus 54 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~ 133 (639)
.+|+.+++++|.++ .+|..+. ++|++|++++|.+++..|..|.++++| ++|++++|++++
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L-----------------~~L~L~~n~l~~ 92 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHL-----------------YALVLVNNKISK 92 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTC-----------------CEEECCSSCCCE
T ss_pred ccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCC-----------------cEEECCCCccCc
Confidence 37899999999998 7888775 689999999999998878788877743 589999999998
Q ss_pred cCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCC
Q 046265 134 SIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQL 213 (639)
Q Consensus 134 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L 213 (639)
..|..|.++++|++|+|++|+++ .+|..+. ++|++|++++|.+++..+..|..+++ |
T Consensus 93 ~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~--------------------L 149 (332)
T 2ft3_A 93 IHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRN--------------------M 149 (332)
T ss_dssp ECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSS--------------------C
T ss_pred cCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCcc--------------------C
Confidence 88999999999999999999998 5676555 79999999999998666555555554 5
Q ss_pred cEEEcCCcccC--CCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCcccc
Q 046265 214 IELEIDNKQLF--GQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIG 291 (639)
Q Consensus 214 ~~L~l~~n~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~ 291 (639)
+.|++++|.+. +..|..+..+ +|+.|++++|.+++... .+ .++|++|++++|.+ ++..|..+.
T Consensus 150 ~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~-~~--~~~L~~L~l~~n~i-----------~~~~~~~l~ 214 (332)
T 2ft3_A 150 NCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPK-DL--PETLNELHLDHNKI-----------QAIELEDLL 214 (332)
T ss_dssp CEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCS-SS--CSSCSCCBCCSSCC-----------CCCCTTSST
T ss_pred CEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCc-cc--cCCCCEEECCCCcC-----------CccCHHHhc
Confidence 55566666663 3667778888 99999999999998543 32 37888888766655 455667899
Q ss_pred CCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhc----
Q 046265 292 KLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEK---- 367 (639)
Q Consensus 292 ~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~---- 367 (639)
.+++|+.|++++|++.+..|..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|++..+. +..+..
T Consensus 215 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~---~~~~~~~~~~ 290 (332)
T 2ft3_A 215 RYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVG---VNDFCPVGFG 290 (332)
T ss_dssp TCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCC---TTSSSCSSCC
T ss_pred CCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccC---hhHccccccc
Confidence 9999999999999999888889999999999999999998 78888999999999999997765543 223322
Q ss_pred --cccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCe
Q 046265 368 --LVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNE 414 (639)
Q Consensus 368 --l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~ 414 (639)
...|+.+++++|.+.... ..+..+..++.|+.+++++|+
T Consensus 291 ~~~~~l~~L~l~~N~~~~~~--------~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 291 VKRAYYNGISLFNNPVPYWE--------VQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSSCCBSEEECCSSSSCGGG--------SCGGGGTTBCCSTTEEC----
T ss_pred cccccccceEeecCcccccc--------cCcccccccchhhhhhccccc
Confidence 467889999999876211 112567889999999999885
No 66
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.96 E-value=3.6e-30 Score=264.53 Aligned_cols=169 Identities=24% Similarity=0.371 Sum_probs=149.7
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
..+|+..+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.++++++||||+++++++...+..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45788889999999999999965 68899999999765545555677889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++|+|.+++...+ .+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp CCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred ECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 9999999999997654 377899999999999999999998 9999999999999999999999999999876533
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
......+||+.|+|||
T Consensus 168 -~~~~~~~gt~~y~aPE 183 (328)
T 3fe3_A 168 -GKLDAFCGAPPYAAPE 183 (328)
T ss_dssp -CGGGTTSSSGGGCCHH
T ss_pred -CccccccCCcceeCcc
Confidence 2345578999999998
No 67
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.96 E-value=1.9e-30 Score=264.64 Aligned_cols=172 Identities=30% Similarity=0.419 Sum_probs=140.9
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
..+|+..+.||+|+||.||+|+. +++.||||.+..........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 46778889999999999999976 57889999998766555566788999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP--IVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|+++|+|.+++........+++..+..++.|+++|++|||.. + |+||||||+||+++.++.+||+|||+++....
T Consensus 115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 191 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191 (309)
T ss_dssp CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence 999999999998755434588899999999999999999998 7 99999999999999999999999999986554
Q ss_pred CCCCcceeeeeceeeCCC
Q 046265 622 DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~~~~~~gt~~Y~APE 639 (639)
........+||+.|+|||
T Consensus 192 ~~~~~~~~~gt~~y~aPE 209 (309)
T 3p86_A 192 TFLSSKSAAGTPEWMAPE 209 (309)
T ss_dssp ----------CCTTSCHH
T ss_pred cccccccCCCCccccChh
Confidence 433344578999999998
No 68
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.96 E-value=4.8e-30 Score=264.34 Aligned_cols=169 Identities=23% Similarity=0.253 Sum_probs=147.0
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
++|+..+.||+|+||+||+|+. .+++.||||.+++... .....+.+.+|+.++++++||||+++++++...+..|+||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 5788889999999999999965 4689999999874321 1123456789999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++|+|.+++...+ .+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+|+.....
T Consensus 85 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 85 EYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp ECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 9999999999997643 467889999999999999999998 9999999999999999999999999999875544
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
.......+||+.|||||
T Consensus 159 ~~~~~~~~gt~~y~aPE 175 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPE 175 (337)
T ss_dssp TCCBCCCEECGGGCCGG
T ss_pred CCcccccccChhhCChh
Confidence 44456689999999998
No 69
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.96 E-value=1.1e-29 Score=261.74 Aligned_cols=173 Identities=20% Similarity=0.417 Sum_probs=146.7
Q ss_pred HhccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC-----
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR----- 536 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----- 536 (639)
..++|+..+.||+|+||.||+|+.+ +++.||||++.... .....+.+.+|+.++++++|||||+++++|.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 3467888999999999999999765 78999999997644 2335677899999999999999999999986543
Q ss_pred ----------------------------------------------------ceeEEecccCCCChhHHhhcCCCCCCcC
Q 046265 537 ----------------------------------------------------QSFLLYEYLGRGSLAIILSNDAAIDEFS 564 (639)
Q Consensus 537 ----------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~ 564 (639)
..++||||+++|+|.+++.........+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 2799999999999999999877666778
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCCC------------Ccceeeee
Q 046265 565 WTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS------------NWSEFVGT 632 (639)
Q Consensus 565 ~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~------------~~~~~~gt 632 (639)
+..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++....... .....+||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 888999999999999999998 999999999999999999999999999987754321 12345799
Q ss_pred ceeeCCC
Q 046265 633 FGYVAPI 639 (639)
Q Consensus 633 ~~Y~APE 639 (639)
+.|+|||
T Consensus 240 ~~y~aPE 246 (332)
T 3qd2_B 240 KLYMSPE 246 (332)
T ss_dssp GGGSCHH
T ss_pred cCccChH
Confidence 9999998
No 70
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.96 E-value=1.8e-29 Score=258.88 Aligned_cols=177 Identities=28% Similarity=0.370 Sum_probs=153.1
Q ss_pred cchHHHHHHHhcc----------CCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhcccc
Q 046265 454 KILYEEVIRATNN----------FDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRH 522 (639)
Q Consensus 454 ~~~~~~~~~~~~~----------f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H 522 (639)
.++++++..+++. |+..+.||+|+||.||+|... +|+.||||.+..... ...+.+.+|+.++++++|
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CSHHHHHHHHHHHTTCCC
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch--hHHHHHHHHHHHHHhCCC
Confidence 4567777777654 556678999999999999765 789999999875432 235678899999999999
Q ss_pred CceeeeEEEEEcCCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee
Q 046265 523 RNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL 602 (639)
Q Consensus 523 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill 602 (639)
|||++++++|...+..|+||||+++|+|.+++... .+++..+..++.|+++|++|||.. +|+||||||+||++
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll 174 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILL 174 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEE
Confidence 99999999999999999999999999999998753 478999999999999999999998 99999999999999
Q ss_pred CCCCceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 603 GLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 603 ~~~~~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+.++.+||+|||+++............+||+.|+|||
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE 211 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPE 211 (321)
T ss_dssp CTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHH
T ss_pred CCCCcEEEeeeeeeeecccCccccccccCCccccCHh
Confidence 9999999999999987765444445678999999998
No 71
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.96 E-value=8.5e-30 Score=262.07 Aligned_cols=185 Identities=30% Similarity=0.561 Sum_probs=159.3
Q ss_pred cchHHHHHHHhccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEE
Q 046265 454 KILYEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSF 533 (639)
Q Consensus 454 ~~~~~~~~~~~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~ 533 (639)
.+++.++....++|+..+.||+|+||.||+|+.++++.||||++...... .....+.+|+.++++++||||++++++|.
T Consensus 19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 45678888999999999999999999999999888999999999764322 22335889999999999999999999999
Q ss_pred cCCceeEEecccCCCChhHHhhcCCC-CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 046265 534 HPRQSFLLYEYLGRGSLAIILSNDAA-IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSD 612 (639)
Q Consensus 534 ~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~D 612 (639)
.++..++||||+++|+|.+++..... ...++|..+..++.|++.|++|||..+.++|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 99999999999999999999986543 34589999999999999999999998777999999999999999999999999
Q ss_pred ccccccCCCCCC-CcceeeeeceeeCCC
Q 046265 613 FGISKFLKPDSS-NWSEFVGTFGYVAPI 639 (639)
Q Consensus 613 fGla~~~~~~~~-~~~~~~gt~~Y~APE 639 (639)
||+++....... ......||+.|+|||
T Consensus 178 fg~~~~~~~~~~~~~~~~~gt~~y~aPE 205 (326)
T 3uim_A 178 FGLAKLMDYKDTHVTTAVRGTIGHIAPE 205 (326)
T ss_dssp CSSCEECCSSSSCEECCCCSCGGGCCHH
T ss_pred CccccccCcccccccccccCCcCccCHH
Confidence 999987653322 233456999999998
No 72
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.96 E-value=2.9e-30 Score=274.58 Aligned_cols=178 Identities=20% Similarity=0.256 Sum_probs=149.4
Q ss_pred HHHHHHHhccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEc
Q 046265 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFH 534 (639)
Q Consensus 457 ~~~~~~~~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 534 (639)
+.+.....++|+..++||+|+||+||+|+.+ +++.||||++.+... .....+.+.+|+.++..++|||||+++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3444455788999999999999999999765 578999999864211 01112347889999999999999999999999
Q ss_pred CCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 046265 535 PRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFG 614 (639)
Q Consensus 535 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfG 614 (639)
++..|+|||||++|+|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+|||++.++.+||+|||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchh
Confidence 999999999999999999997632 3578899999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCCCC-CcceeeeeceeeCCC
Q 046265 615 ISKFLKPDSS-NWSEFVGTFGYVAPI 639 (639)
Q Consensus 615 la~~~~~~~~-~~~~~~gt~~Y~APE 639 (639)
+|+....... .....+||+.|||||
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~APE 246 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISPE 246 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCHH
T ss_pred hhhhcccCCCcccccccCCcCeeChH
Confidence 9987654332 223468999999998
No 73
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.96 E-value=4.5e-30 Score=266.28 Aligned_cols=170 Identities=21% Similarity=0.306 Sum_probs=141.3
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCceeE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 540 (639)
.++|+..++||+|+||+||+|+. .+++.||||++++... .....+.+.+|..+++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 46788899999999999999965 5689999999875321 122345678899999987 69999999999999999999
Q ss_pred EecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCC
Q 046265 541 LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
||||+++|+|.+++...+ .+++..+..++.|++.||+|||.. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 102 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 999999999999997654 478899999999999999999998 99999999999999999999999999998755
Q ss_pred CCCCCcceeeeeceeeCCC
Q 046265 621 PDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~~~~~~gt~~Y~APE 639 (639)
.........+||+.|||||
T Consensus 176 ~~~~~~~~~~gt~~y~aPE 194 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPE 194 (353)
T ss_dssp C---------CCGGGCCHH
T ss_pred cCCccccccCCCcCeEChh
Confidence 4444455679999999998
No 74
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.96 E-value=8.1e-30 Score=267.59 Aligned_cols=170 Identities=22% Similarity=0.279 Sum_probs=145.8
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCceeE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 540 (639)
.++|+..++||+|+||+||+|+.+ +++.||||++++... .....+.+.+|..++.++ +|||||++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467888999999999999999654 678999999975432 122234577899999887 89999999999999999999
Q ss_pred EecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCC
Q 046265 541 LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
||||+++|+|..++...+ .+++..+..++.|++.||+|||.. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 131 V~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 999999999999997653 478899999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCCcceeeeeceeeCCC
Q 046265 621 PDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~~~~~~gt~~Y~APE 639 (639)
.........+||+.|||||
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE 223 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPE 223 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHH
T ss_pred cCCCccccccCCcccCCch
Confidence 4444556789999999998
No 75
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.96 E-value=1.6e-29 Score=256.38 Aligned_cols=167 Identities=26% Similarity=0.444 Sum_probs=148.2
Q ss_pred hccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
..+|+..+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|+.++++++||||+++++++..++..|+||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc--cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 4678889999999999999996 46789999999875432 23566889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++|+|.+++... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 97 e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 97 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp ECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred ECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 999999999999754 377889999999999999999999 9999999999999999999999999999887655
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
.......+||+.|+|||
T Consensus 170 ~~~~~~~~gt~~y~aPE 186 (297)
T 3fxz_A 170 QSKRSTMVGTPYWMAPE 186 (297)
T ss_dssp TCCBCCCCSCGGGCCHH
T ss_pred ccccCCccCCcCccChh
Confidence 55555678999999998
No 76
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.96 E-value=2.1e-29 Score=268.89 Aligned_cols=172 Identities=19% Similarity=0.307 Sum_probs=150.1
Q ss_pred HHhccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeE
Q 046265 462 RATNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 462 ~~~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 540 (639)
...++|+..+.||+|+||.||+|. ..+|+.||+|.+..........+.+.+|+.++++++|||||++++++.+++..|+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 346778889999999999999995 5678999999998766555556778999999999999999999999999999999
Q ss_pred EecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC---CCCceEEccccccc
Q 046265 541 LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG---LDYDAHVSDFGISK 617 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~---~~~~~kl~DfGla~ 617 (639)
||||+++|+|.+.+.... .+++..+..++.|++.|++|||.. +|+||||||+||+++ .++.+||+|||+|+
T Consensus 88 v~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 999999999999987654 478899999999999999999999 999999999999998 46789999999998
Q ss_pred cCCCCCCCcceeeeeceeeCCC
Q 046265 618 FLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~~~~~~~gt~~Y~APE 639 (639)
............+||++|||||
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~APE 183 (444)
T 3soa_A 162 EVEGEQQAWFGFAGTPGYLSPE 183 (444)
T ss_dssp CCCTTCCBCCCSCSCGGGCCHH
T ss_pred EecCCCceeecccCCcccCCHH
Confidence 8765544455678999999998
No 77
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.96 E-value=4.3e-30 Score=271.34 Aligned_cols=178 Identities=21% Similarity=0.243 Sum_probs=150.6
Q ss_pred HHHHHHHhccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEc
Q 046265 457 YEEVIRATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFH 534 (639)
Q Consensus 457 ~~~~~~~~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 534 (639)
+.+.....++|+..++||+|+||+||+|+. .+++.||||++.+... .....+.+.+|..++.+++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 445555678899999999999999999966 5789999999874221 11123447889999999999999999999999
Q ss_pred CCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 046265 535 PRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFG 614 (639)
Q Consensus 535 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfG 614 (639)
.+..|+||||+++|+|.+++...+ ..+++..+..++.|++.|++|||.. +|+||||||+|||++.++.+||+|||
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeech
Confidence 999999999999999999997543 2578899999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCCCC-CcceeeeeceeeCCC
Q 046265 615 ISKFLKPDSS-NWSEFVGTFGYVAPI 639 (639)
Q Consensus 615 la~~~~~~~~-~~~~~~gt~~Y~APE 639 (639)
+|+.+..... .....+||+.|||||
T Consensus 208 la~~~~~~~~~~~~~~~Gt~~Y~APE 233 (412)
T 2vd5_A 208 SCLKLRADGTVRSLVAVGTPDYLSPE 233 (412)
T ss_dssp TCEECCTTSCEECSSCCSCGGGCCHH
T ss_pred hheeccCCCccccceeccccCcCCHH
Confidence 9987754332 123468999999998
No 78
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.96 E-value=3.6e-29 Score=255.44 Aligned_cols=168 Identities=25% Similarity=0.463 Sum_probs=145.3
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
++|...+.||+|+||.||+|.. .+++.||||++... .....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 5677889999999999999965 56899999998643 35566789999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
|+++|+|.+++.... ..++|..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 88 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 88 YIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp CCTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred ecCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 999999999998643 3588999999999999999999998 99999999999999999999999999998764332
Q ss_pred CC--------------cceeeeeceeeCCC
Q 046265 624 SN--------------WSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~~--------------~~~~~gt~~Y~APE 639 (639)
.. ....+||+.|+|||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 192 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192 (310)
T ss_dssp -----------------CCCCSCGGGCCHH
T ss_pred ccccccccccccccccccccCCCcceeCHH
Confidence 21 11467999999998
No 79
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.96 E-value=2.2e-29 Score=260.51 Aligned_cols=169 Identities=23% Similarity=0.284 Sum_probs=147.3
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCceeEE
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 541 (639)
++|+..+.||+|+||.||+|+. .+++.||||.+.+... .....+.+.+|+.++.++ +|||||++++++.+.+..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 5678889999999999999965 4688999999976432 333456678999999887 899999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+|+....
T Consensus 89 ~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 99999999999997643 478899999999999999999998 999999999999999999999999999987544
Q ss_pred CCCCcceeeeeceeeCCC
Q 046265 622 DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~~~~~~gt~~Y~APE 639 (639)
........+||+.|+|||
T Consensus 163 ~~~~~~~~~gt~~y~aPE 180 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPE 180 (345)
T ss_dssp TTCCBCCCCSCGGGCCHH
T ss_pred CCCcccccCCCccccCcc
Confidence 444455678999999998
No 80
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.96 E-value=1.6e-29 Score=259.40 Aligned_cols=177 Identities=32% Similarity=0.492 Sum_probs=153.0
Q ss_pred HHHHHHhccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCc
Q 046265 458 EEVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQ 537 (639)
Q Consensus 458 ~~~~~~~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 537 (639)
.++..++++|+..+.||+|+||.||+|..++++.||||++.... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109 (321)
T ss_dssp SCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred HHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence 34445678999999999999999999998889999999987643 2345678999999999999999999999999999
Q ss_pred eeEEecccCCCChhHHhhcCCC-CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccccc
Q 046265 538 SFLLYEYLGRGSLAIILSNDAA-IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGIS 616 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla 616 (639)
.|+||||+++|+|.+++..... ...++|..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccc
Confidence 9999999999999999976432 23589999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCC--CCcceeeeeceeeCCC
Q 046265 617 KFLKPDS--SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 617 ~~~~~~~--~~~~~~~gt~~Y~APE 639 (639)
+...... .......||+.|+|||
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE 211 (321)
T 2qkw_B 187 KKGTELDQTHLSTVVKGTLGYIDPE 211 (321)
T ss_dssp EECSSSSCCCCBCCCEEETTTCCHH
T ss_pred cccccccccccccccCCCccccCHH
Confidence 8654322 1223467999999998
No 81
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.96 E-value=2.1e-29 Score=257.24 Aligned_cols=170 Identities=23% Similarity=0.332 Sum_probs=143.8
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
.++|+..+.||+|+||.||+|+..+++.||||++............+.+|+.++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 36678889999999999999988889999999997654444455778899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
|+++ ++.+.+.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 173 (311)
T 3niz_A 100 FMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPV 173 (311)
T ss_dssp CCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred CCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence 9985 7877776543 3478899999999999999999998 99999999999999999999999999998775444
Q ss_pred CCcceeeeeceeeCCC
Q 046265 624 SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~~~~~~~gt~~Y~APE 639 (639)
......+||+.|+|||
T Consensus 174 ~~~~~~~~t~~y~aPE 189 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPD 189 (311)
T ss_dssp C---CCCCCCTTCCHH
T ss_pred ccccCCcccCCcCCHH
Confidence 4445568999999998
No 82
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=2.8e-32 Score=294.59 Aligned_cols=350 Identities=20% Similarity=0.133 Sum_probs=204.7
Q ss_pred eeeEEEEeCCCcccccCCcc-ccCCCCCCEEECcCCCCcc----CCCCCCCCCCCCCEEEcccCcCCCCCCccc-CCCC-
Q 046265 6 FFFFQVVHESNTLFAIIPPQ-IGNISNLKFLDMGNNQLSG----VIPQEIDPLTHLKHLYINVNKLRGSVPREV-GQLS- 78 (639)
Q Consensus 6 ~~~~~~~~~~n~~~~~~p~~-~~~l~~L~~L~Ls~n~l~~----~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~-~~l~- 78 (639)
-.+..+++++|++....... +..+++|++|+|++|.++. .+|..+..+++|++|+|++|.++...+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 34567778777776544333 6677788888888888763 345666777888888888888764333332 2344
Q ss_pred ---CCCEEeeecccCcc----ccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCcccc-----CCCCCC
Q 046265 79 ---SLKQLVLYCNGLSG----WLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLG-----HLSNLA 146 (639)
Q Consensus 79 ---~L~~L~L~~N~l~~----~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~-----~l~~L~ 146 (639)
+|++|+|++|+++. .+|..+..+++| ++|++++|.++...+..+. ..++|+
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L-----------------~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~ 145 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTL-----------------QELHLSDNLLGDAGLQLLCEGLLDPQCRLE 145 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTC-----------------CEEECCSSBCHHHHHHHHHHHHTSTTCCCC
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCce-----------------eEEECCCCcCchHHHHHHHHHHhcCCCcce
Confidence 58888888887773 445555555532 4778888877654343332 245688
Q ss_pred EEeccCCCCCCCC----CccccCCCcccEEEcccCcCCccCCccCc-----CCCCCCeEEccCCccc--------ccccc
Q 046265 147 VLHLGDNSLFGSI----PPILGKVQSLLSLGFDLNLLNGVLPPSIS-----NLSNLEGLYLYSSLVS--------AEIGN 209 (639)
Q Consensus 147 ~L~L~~N~l~~~~----p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~l~~L~~L~l~~~~~~--------~~~~~ 209 (639)
+|+|++|++++.. +..+..+++|++|++++|.++...+..+. ..++|+.|+++.+.+. ..+..
T Consensus 146 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 225 (461)
T 1z7x_W 146 KLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVAS 225 (461)
T ss_dssp EEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHH
T ss_pred EEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHh
Confidence 8888888776532 44556667788888888777654333332 2456667766655432 23445
Q ss_pred ccCCcEEEcCCcccCCCC-----CccccCCCCCceeccccccccCc----chhhhhcCCCccEEeccCCcccccccCcCC
Q 046265 210 LLQLIELEIDNKQLFGQI-----PKSLRNFTSLNIVHLEQNHLTGN----IYEVFGIYPNLTFLDLSQNNFYGSLNFSMN 280 (639)
Q Consensus 210 l~~L~~L~l~~n~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n 280 (639)
+++|+.|++++|.+.... +..+..+++|+.|++++|.++.. ++..+..+++|++|++++|.+.+
T Consensus 226 ~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~------- 298 (461)
T 1z7x_W 226 KASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGD------- 298 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHH-------
T ss_pred CCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCch-------
Confidence 566666666666654321 12222456666666666666653 34455556666666666555421
Q ss_pred ccccccCcccc-----CCCCCCEEeccCCccccc----CCccccCCCCCCeeeccCccCcccCCcCccC-----CCCCCE
Q 046265 281 NITRSIPPKIG-----KLYQLHKLDFSLNHIVGE----LPIELGNLKSLNYRALNGNKVYGSLPRVLGS-----ISDLEY 346 (639)
Q Consensus 281 ~~~~~~p~~~~-----~l~~L~~L~Ls~N~~~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~ 346 (639)
..+..+. ..++|+.|++++|.+++. +|..+..+++|+.|++++|.+.+..+..+.. .++|+.
T Consensus 299 ----~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~ 374 (461)
T 1z7x_W 299 ----EGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRV 374 (461)
T ss_dssp ----HHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCE
T ss_pred ----HHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEE
Confidence 1111111 124666677776666544 3444555666667777666665443333321 456666
Q ss_pred EeCCCCCCCccc-ccCChhhhccccCCeeeccCCcCce
Q 046265 347 LDLSTNYNNEFR-KEFPVELEKLVQLTELDLVITFWEE 383 (639)
Q Consensus 347 L~Ls~N~~~~~~-~~~p~~~~~l~~L~~l~l~~n~~~~ 383 (639)
|++++|++.... ..+|..+..+++|+.|++++|.+.+
T Consensus 375 L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 375 LWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp EECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred EECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 777664322100 1345556666666666666665543
No 83
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.96 E-value=3.6e-30 Score=271.75 Aligned_cols=174 Identities=19% Similarity=0.241 Sum_probs=147.2
Q ss_pred HHHHHhccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC
Q 046265 459 EVIRATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR 536 (639)
Q Consensus 459 ~~~~~~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 536 (639)
++....++|+..++||+|+||.||+|+.+ +++.||||.+.+... .....+.+.+|+.+++.++|||||+++++|.+++
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 34445688999999999999999999654 678999999864210 0111234778999999999999999999999999
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccccc
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGIS 616 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla 616 (639)
..|+||||+++|+|.++++.. .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+|
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a 215 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTC 215 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecccee
Confidence 999999999999999999753 367889999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCC-CcceeeeeceeeCCC
Q 046265 617 KFLKPDSS-NWSEFVGTFGYVAPI 639 (639)
Q Consensus 617 ~~~~~~~~-~~~~~~gt~~Y~APE 639 (639)
+.+..... ...+.+||+.|||||
T Consensus 216 ~~~~~~~~~~~~~~~gt~~Y~APE 239 (410)
T 3v8s_A 216 MKMNKEGMVRCDTAVGTPDYISPE 239 (410)
T ss_dssp EECCTTSEEECCSCCSCGGGCCHH
T ss_pred EeeccCCcccccCCcCCccccCHH
Confidence 87654322 233578999999998
No 84
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.96 E-value=9.5e-29 Score=251.93 Aligned_cols=182 Identities=34% Similarity=0.528 Sum_probs=158.1
Q ss_pred cchHHHHHHHhccCCCc------ceeccCCCceEEEEEcCCCcEEEEEEccCCC--CChhhHHHHHHHHHHHhccccCce
Q 046265 454 KILYEEVIRATNNFDAK------YCIGTAGQASVYKAELPSWEIVAVKKFHSPH--PDMVVQQAFSNEIKALTELRHRNV 525 (639)
Q Consensus 454 ~~~~~~~~~~~~~f~~~------~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~H~ni 525 (639)
.++++++..++++|... +.||+|+||.||+|.. +++.||||++.... ......+.+.+|+.++++++||||
T Consensus 14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 92 (307)
T 2nru_A 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92 (307)
T ss_dssp ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB
T ss_pred cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe
Confidence 56789999999999887 8899999999999986 57899999987543 223346778999999999999999
Q ss_pred eeeEEEEEcCCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC
Q 046265 526 VKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605 (639)
Q Consensus 526 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~ 605 (639)
+++++++...+..++||||+++|+|.+++........++|..+..++.|++.|++|||.. +|+||||||+||+++.+
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~ 169 (307)
T 2nru_A 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEA 169 (307)
T ss_dssp CCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTT
T ss_pred EEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCC
Confidence 999999999999999999999999999997654445689999999999999999999998 99999999999999999
Q ss_pred CceEEccccccccCCCCCCC--cceeeeeceeeCCC
Q 046265 606 YDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVAPI 639 (639)
Q Consensus 606 ~~~kl~DfGla~~~~~~~~~--~~~~~gt~~Y~APE 639 (639)
+.+||+|||+++........ .....||+.|+|||
T Consensus 170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE 205 (307)
T 2nru_A 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE 205 (307)
T ss_dssp CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHH
T ss_pred CcEEEeecccccccccccccccccccCCCcCcCChH
Confidence 99999999999876533221 23457999999998
No 85
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.96 E-value=2.1e-29 Score=260.42 Aligned_cols=169 Identities=24% Similarity=0.365 Sum_probs=139.9
Q ss_pred hccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.++|+..+.||+|+||+||+|. ..+|+.||||++...... ...+.+.+|+.++++++||||+++++++...+..|+||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 4678888999999999999996 467899999999765432 22456789999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++|+|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+|......
T Consensus 88 E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 161 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161 (347)
T ss_dssp ECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence 9999999999997654 478899999999999999999998 9999999999999999999999999998876433
Q ss_pred C-CCcceeeeeceeeCCC
Q 046265 623 S-SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~-~~~~~~~gt~~Y~APE 639 (639)
. ......+||+.|+|||
T Consensus 162 ~~~~~~~~~gt~~y~aPE 179 (347)
T 3zgw_A 162 KDYHLQTCCGSLAYAAPE 179 (347)
T ss_dssp ----------CGGGCCHH
T ss_pred CCccccccCCccCccCHH
Confidence 2 2334578999999998
No 86
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.96 E-value=3.8e-29 Score=252.98 Aligned_cols=169 Identities=22% Similarity=0.357 Sum_probs=145.3
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
++|+..+.||+|+||.||+|.. .+++.||||++..........+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 4678889999999999999965 568999999998765555556778899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
|+++ ++.+.+.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp CCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC
T ss_pred cCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc
Confidence 9986 4544443322 3478899999999999999999999 99999999999999999999999999998776444
Q ss_pred CCcceeeeeceeeCCC
Q 046265 624 SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~~~~~~~gt~~Y~APE 639 (639)
......+||+.|+|||
T Consensus 156 ~~~~~~~~t~~y~aPE 171 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPD 171 (292)
T ss_dssp SCCCSCCSCGGGCCHH
T ss_pred ccccCCccccCCcChH
Confidence 4455678999999998
No 87
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.96 E-value=1.4e-29 Score=261.54 Aligned_cols=171 Identities=22% Similarity=0.288 Sum_probs=146.2
Q ss_pred HhccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCcee
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSF 539 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~ 539 (639)
..++|...++||+|+||.||+|+. .+++.||||.++.... .....+.+.+|..++.++ +||||+++++++.+.+..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 457888899999999999999965 4689999999875321 112245577899999876 8999999999999999999
Q ss_pred EEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 540 LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 540 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
+||||+++|+|.+++...+ .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 95 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 9999999999999997643 478899999999999999999998 9999999999999999999999999999875
Q ss_pred CCCCCCcceeeeeceeeCCC
Q 046265 620 KPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~~~~~~~gt~~Y~APE 639 (639)
..........+||+.|+|||
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE 188 (345)
T 1xjd_A 169 MLGDAKTNTFCGTPDYIAPE 188 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHH
T ss_pred ccCCCcccCCCCCcccCChh
Confidence 44444455678999999998
No 88
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.96 E-value=2.3e-29 Score=263.27 Aligned_cols=168 Identities=21% Similarity=0.342 Sum_probs=146.2
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCC-CChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPH-PDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
++|+..+.||+|+||.||+|.. .+++.||||.+.... ......+.+.+|+.++++++|||||+++++|.+.+..|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 5678889999999999999964 567899999986432 11123456889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++|+|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+|+.+...
T Consensus 95 e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp CCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 9999999999998653 478899999999999999999998 9999999999999999999999999999876533
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
......+||+.|||||
T Consensus 169 -~~~~~~~gt~~Y~aPE 184 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPE 184 (384)
T ss_dssp -CCBCCCCSCGGGCCGG
T ss_pred -CceeccCCCccccCCe
Confidence 3345678999999998
No 89
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.2e-28 Score=256.29 Aligned_cols=276 Identities=21% Similarity=0.247 Sum_probs=169.7
Q ss_pred EEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccC
Q 046265 11 VVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGL 90 (639)
Q Consensus 11 ~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 90 (639)
.+.+++++. .+|..+. ++|++|+|++|.+++..+..|..+++|++|++++|++++..|..|.++++|++|++++|++
T Consensus 36 c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 112 (353)
T 2z80_A 36 CKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 112 (353)
T ss_dssp EECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred eeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcC
Confidence 455555554 4555444 3677777777777655555667777777777777777655566667777777777777776
Q ss_pred ccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCc--cccCCCCCCEEeccCCC-CCCCCCccccCCC
Q 046265 91 SGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPH--FLGHLSNLAVLHLGDNS-LFGSIPPILGKVQ 167 (639)
Q Consensus 91 ~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~ 167 (639)
++..+..|.++++| ++|++++|++++ +|. .+.++++|++|++++|+ +.+..|..+..++
T Consensus 113 ~~~~~~~~~~l~~L-----------------~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 174 (353)
T 2z80_A 113 SNLSSSWFKPLSSL-----------------TFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLT 174 (353)
T ss_dssp SSCCHHHHTTCTTC-----------------SEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred CcCCHhHhCCCccC-----------------CEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCC
Confidence 65444445555422 366777776663 333 56666777777777663 4444455666667
Q ss_pred cccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccc
Q 046265 168 SLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHL 247 (639)
Q Consensus 168 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 247 (639)
+|++|++++|.+++..|..+..+++ |+.|++++|++....+..+..+++|+.|++++|.+
T Consensus 175 ~L~~L~l~~n~l~~~~~~~l~~l~~--------------------L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l 234 (353)
T 2z80_A 175 FLEELEIDASDLQSYEPKSLKSIQN--------------------VSHLILHMKQHILLLEIFVDVTSSVECLELRDTDL 234 (353)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSE--------------------EEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBC
T ss_pred CCCEEECCCCCcCccCHHHHhcccc--------------------CCeecCCCCccccchhhhhhhcccccEEECCCCcc
Confidence 7777777777766666665555544 45555555555332222334466666777777666
Q ss_pred cCcchhhh---hcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCcc-ccCCCCCCee
Q 046265 248 TGNIYEVF---GIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIE-LGNLKSLNYR 323 (639)
Q Consensus 248 ~~~~~~~~---~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~-~~~l~~L~~L 323 (639)
++..+..+ ...+.++.++++++.+. ++.+. .+|..+..+++|+.|++++|+++ .+|.. |..+++|+.|
T Consensus 235 ~~~~~~~l~~~~~~~~l~~l~L~~~~l~------~~~l~-~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L 306 (353)
T 2z80_A 235 DTFHFSELSTGETNSLIKKFTFRNVKIT------DESLF-QVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKI 306 (353)
T ss_dssp TTCCCC------CCCCCCEEEEESCBCC------HHHHH-HHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ccccccccccccccchhhcccccccccc------Ccchh-hhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEE
Confidence 65443322 23455667776666542 23332 46777778888888888888887 44444 5788888888
Q ss_pred eccCccCcccCC
Q 046265 324 ALNGNKVYGSLP 335 (639)
Q Consensus 324 ~l~~N~l~~~~p 335 (639)
++++|.+.+..|
T Consensus 307 ~L~~N~~~~~~~ 318 (353)
T 2z80_A 307 WLHTNPWDCSCP 318 (353)
T ss_dssp ECCSSCBCCCHH
T ss_pred EeeCCCccCcCC
Confidence 888888775544
No 90
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.96 E-value=5.3e-29 Score=258.92 Aligned_cols=169 Identities=21% Similarity=0.309 Sum_probs=146.9
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCCh----hhHHHHHHHHHHHhccccCceeeeEEEEEcCCce
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDM----VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS 538 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 538 (639)
.+.|+..+.||+|+||.||+|.. .+|+.||||.+....... ...+.+.+|+.++++++|||||++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 46788889999999999999965 468999999998654221 2356789999999999999999999999999999
Q ss_pred eEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC----ceEEcccc
Q 046265 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY----DAHVSDFG 614 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~----~~kl~DfG 614 (639)
|+||||+++|+|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 99999999999999997643 478899999999999999999998 999999999999998776 79999999
Q ss_pred ccccCCCCCCCcceeeeeceeeCCC
Q 046265 615 ISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 615 la~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+++.+... ......+||+.|+|||
T Consensus 165 ~a~~~~~~-~~~~~~~gt~~y~aPE 188 (361)
T 2yab_A 165 LAHEIEDG-VEFKNIFGTPEFVAPE 188 (361)
T ss_dssp SCEECCTT-CCCCCCCSCGGGCCHH
T ss_pred CceEcCCC-CccccCCCCccEECch
Confidence 99877543 2334578999999998
No 91
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.96 E-value=6.4e-29 Score=258.94 Aligned_cols=170 Identities=22% Similarity=0.360 Sum_probs=148.5
Q ss_pred HhccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
..++|+..+.||+|+||.||+|.. .+++.||||.+..........+.+.+|+.++++++|||||++++++.+.+..|+|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 356788899999999999999965 5689999999987655555567789999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC---CceEEcccccccc
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD---YDAHVSDFGISKF 618 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~---~~~kl~DfGla~~ 618 (639)
|||+++|+|.+.+.... .+++..+..++.|+++|++|||.. +|+||||||+||+++.+ +.+||+|||+++.
T Consensus 107 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp ECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 99999999999987543 478899999999999999999999 99999999999999865 4599999999987
Q ss_pred CCCCCCCcceeeeeceeeCCC
Q 046265 619 LKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 619 ~~~~~~~~~~~~gt~~Y~APE 639 (639)
.... ......+||+.|+|||
T Consensus 181 ~~~~-~~~~~~~gt~~y~aPE 200 (362)
T 2bdw_A 181 VNDS-EAWHGFAGTPGYLSPE 200 (362)
T ss_dssp CTTC-CSCCCSCSCTTTCCHH
T ss_pred ecCC-cccccCCCCccccCHH
Confidence 6533 2334578999999998
No 92
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.96 E-value=2.3e-29 Score=254.10 Aligned_cols=169 Identities=24% Similarity=0.381 Sum_probs=142.3
Q ss_pred ccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEecc
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 544 (639)
++|+..+.||+|+||.||+|+..+++.||||++..........+.+.+|+.++++++||||+++++++...+..|+||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46778899999999999999888899999999976543333456788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCCC
Q 046265 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624 (639)
Q Consensus 545 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 624 (639)
+++ +|.+++.... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR 155 (288)
T ss_dssp CSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred cCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc
Confidence 975 8988887543 3478899999999999999999998 999999999999999999999999999987654333
Q ss_pred CcceeeeeceeeCCC
Q 046265 625 NWSEFVGTFGYVAPI 639 (639)
Q Consensus 625 ~~~~~~gt~~Y~APE 639 (639)
.....+||+.|+|||
T Consensus 156 ~~~~~~~t~~y~aPE 170 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPD 170 (288)
T ss_dssp ------CCCTTCCHH
T ss_pred ccccccccccccCch
Confidence 344568999999998
No 93
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.1e-27 Score=241.37 Aligned_cols=231 Identities=22% Similarity=0.240 Sum_probs=193.4
Q ss_pred cceeee--EEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCC
Q 046265 3 CLAFFF--FQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSL 80 (639)
Q Consensus 3 ~~~~~~--~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L 80 (639)
|.|... ..++.+.+++. .+|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|
T Consensus 6 C~C~~~~~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 82 (285)
T 1ozn_A 6 CVCYNEPKVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82 (285)
T ss_dssp CEEECSSSCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred ceECCCCCeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCC
Confidence 777554 46777777765 567655 4689999999999998877889999999999999999998778899999999
Q ss_pred CEEeeeccc-CccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCC
Q 046265 81 KQLVLYCNG-LSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSI 159 (639)
Q Consensus 81 ~~L~L~~N~-l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 159 (639)
++|++++|+ ++...|..|..+++| ++|++++|++++..|..+.++++|++|++++|++++..
T Consensus 83 ~~L~l~~n~~l~~~~~~~~~~l~~L-----------------~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 145 (285)
T 1ozn_A 83 EQLDLSDNAQLRSVDPATFHGLGRL-----------------HTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALP 145 (285)
T ss_dssp CEEECCSCTTCCCCCTTTTTTCTTC-----------------CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CEEeCCCCCCccccCHHHhcCCcCC-----------------CEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccC
Confidence 999999997 776667777776633 58999999999887888999999999999999998777
Q ss_pred CccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCce
Q 046265 160 PPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNI 239 (639)
Q Consensus 160 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 239 (639)
+..++.+++|+.|++++|.+++..+..+..+ ++|+.|++++|.+.+..|.++..+++|+.
T Consensus 146 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--------------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 205 (285)
T 1ozn_A 146 DDTFRDLGNLTHLFLHGNRISSVPERAFRGL--------------------HSLDRLLLHQNRVAHVHPHAFRDLGRLMT 205 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTC--------------------TTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred HhHhccCCCccEEECCCCcccccCHHHhcCc--------------------cccCEEECCCCcccccCHhHccCcccccE
Confidence 7778999999999999999986655555544 45666777788887878888999999999
Q ss_pred eccccccccCcchhhhhcCCCccEEeccCCcccc
Q 046265 240 VHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYG 273 (639)
Q Consensus 240 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 273 (639)
|++++|.+++..+..+..+++|+.|++++|.+..
T Consensus 206 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 206 LYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp EECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred eeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 9999999999888889999999999988888753
No 94
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=8.7e-32 Score=290.75 Aligned_cols=359 Identities=18% Similarity=0.106 Sum_probs=271.2
Q ss_pred CCCCEEECcCCCCccCCCCC-CCCCCCCCEEEcccCcCCC----CCCcccCCCCCCCEEeeecccCccccCccccC-CCC
Q 046265 30 SNLKFLDMGNNQLSGVIPQE-IDPLTHLKHLYINVNKLRG----SVPREVGQLSSLKQLVLYCNGLSGWLPSSFGN-LNN 103 (639)
Q Consensus 30 ~~L~~L~Ls~n~l~~~~p~~-~~~L~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~ 103 (639)
++|++|||++|.++...... +..+++|++|+|++|.++. .++..+..+++|++|+|++|.++...+..+.. +..
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 56899999999997543333 7789999999999999984 35777888999999999999998755544432 221
Q ss_pred CCcccCCCCCcccCCCCccEEEccCCcCcc----cCCccccCCCCCCEEeccCCCCCCCCCcccc-----CCCcccEEEc
Q 046265 104 LAIGSMPNSLSNLTSLSLFHLDLSENQLSG----SIPHFLGHLSNLAVLHLGDNSLFGSIPPILG-----KVQSLLSLGF 174 (639)
Q Consensus 104 L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~l 174 (639)
- ..+ |++|+|++|+++. .+|..+..+++|++|+|++|.++...+..+. ..++|++|++
T Consensus 83 ~-----------~~~--L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L 149 (461)
T 1z7x_W 83 P-----------SCK--IQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQL 149 (461)
T ss_dssp T-----------TCC--CCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred C-----------CCc--eeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEEC
Confidence 0 002 3699999999984 5688899999999999999998754343332 3568999999
Q ss_pred ccCcCCcc----CCccCcCCCCCCeEEccCCccccc----cc-----cccCCcEEEcCCcccCCC----CCccccCCCCC
Q 046265 175 DLNLLNGV----LPPSISNLSNLEGLYLYSSLVSAE----IG-----NLLQLIELEIDNKQLFGQ----IPKSLRNFTSL 237 (639)
Q Consensus 175 ~~N~l~~~----~p~~~~~l~~L~~L~l~~~~~~~~----~~-----~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L 237 (639)
++|.+++. ++..+..+++|+.|+++.+.+... +. ..++|+.|++++|.+... ++..+..+++|
T Consensus 150 ~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 229 (461)
T 1z7x_W 150 EYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASL 229 (461)
T ss_dssp TTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTC
T ss_pred CCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCc
Confidence 99999874 466677789999999998776431 22 255999999999999764 57778889999
Q ss_pred ceeccccccccCcc-----hhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCc
Q 046265 238 NIVHLEQNHLTGNI-----YEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPI 312 (639)
Q Consensus 238 ~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~ 312 (639)
+.|++++|.++... +..+..+++|++|++++|.+++.- ...++..+..+++|+.|++++|.+.+..+.
T Consensus 230 ~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~-------~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 230 RELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKG-------CGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp CEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH-------HHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred cEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHH-------HHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 99999999988643 223345899999998888763200 012566777889999999999998765444
Q ss_pred cccC-----CCCCCeeeccCccCccc----CCcCccCCCCCCEEeCCCCCCCcccccCChhhhc-----cccCCeeeccC
Q 046265 313 ELGN-----LKSLNYRALNGNKVYGS----LPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEK-----LVQLTELDLVI 378 (639)
Q Consensus 313 ~~~~-----l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~-----l~~L~~l~l~~ 378 (639)
.+.. .++|+.|++++|.+++. +|..+..+++|+.|++++|+ +....+..+.. .++|+.|++++
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~---i~~~~~~~l~~~l~~~~~~L~~L~L~~ 379 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNR---LEDAGVRELCQGLGQPGSVLRVLWLAD 379 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSB---CHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCc---cccccHHHHHHHHcCCCCceEEEECCC
Confidence 4433 36999999999999865 56677788999999999964 43333333332 56999999999
Q ss_pred CcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeeee
Q 046265 379 TFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRG 417 (639)
Q Consensus 379 n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~g 417 (639)
|.+.+.. ....+..+..+++|+.+|+++|++++
T Consensus 380 n~i~~~~------~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 380 CDVSDSS------CSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp SCCCHHH------HHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred CCCChhh------HHHHHHHHHhCCCccEEECCCCCCCH
Confidence 9876411 12334667889999999999999874
No 95
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.96 E-value=8e-29 Score=259.10 Aligned_cols=172 Identities=17% Similarity=0.290 Sum_probs=146.0
Q ss_pred hccCCCcceeccCCCceEEEEEc--------CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEc
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL--------PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFH 534 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~ 534 (639)
.++|+..+.||+|+||.||+|+. .++..||||.++... .....+.+.+|+++++++ +|||||+++++|..
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 35677889999999999999964 245679999997543 334456789999999999 89999999999999
Q ss_pred CCceeEEecccCCCChhHHhhcCCC-------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCee
Q 046265 535 PRQSFLLYEYLGRGSLAIILSNDAA-------------IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVL 601 (639)
Q Consensus 535 ~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil 601 (639)
.+..|+||||+++|+|.+++..... ...+++..+..++.|+++||+|||.. +|+||||||+||+
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence 9999999999999999999976432 23578999999999999999999998 9999999999999
Q ss_pred eCCCCceEEccccccccCCCCCC--CcceeeeeceeeCCC
Q 046265 602 LGLDYDAHVSDFGISKFLKPDSS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 602 l~~~~~~kl~DfGla~~~~~~~~--~~~~~~gt~~Y~APE 639 (639)
++.++.+||+|||+|+....... ......||+.|||||
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE 275 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 275 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHH
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHh
Confidence 99999999999999987653322 223356789999998
No 96
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2e-28 Score=249.53 Aligned_cols=284 Identities=22% Similarity=0.229 Sum_probs=180.9
Q ss_pred cceeeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCC--CCCcccCCCCCC
Q 046265 3 CLAFFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRG--SVPREVGQLSSL 80 (639)
Q Consensus 3 ~~~~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~--~~p~~~~~l~~L 80 (639)
|.|-. ..++.+++++. .+|..+. ++|++|+|++|.++...+..|..+++|++|+|++|+++. ..|..+..+++|
T Consensus 5 C~C~~-~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L 80 (306)
T 2z66_A 5 CSCSG-TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSL 80 (306)
T ss_dssp CEEET-TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCC
T ss_pred CeeCC-CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccccccccccc
Confidence 66643 45666666654 5565553 578888888888875444456788888888888887762 235566677788
Q ss_pred CEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCC-ccccCCCCCCEEeccCCCCCCCC
Q 046265 81 KQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIP-HFLGHLSNLAVLHLGDNSLFGSI 159 (639)
Q Consensus 81 ~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~ 159 (639)
++|++++|.++ .+|..+..+++| ++|++++|++++..+ ..+..+++|++|++++|.+.+..
T Consensus 81 ~~L~Ls~n~i~-~l~~~~~~l~~L-----------------~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 142 (306)
T 2z66_A 81 KYLDLSFNGVI-TMSSNFLGLEQL-----------------EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 142 (306)
T ss_dssp CEEECCSCSEE-EEEEEEETCTTC-----------------CEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECS
T ss_pred CEEECCCCccc-cChhhcCCCCCC-----------------CEEECCCCcccccccchhhhhccCCCEEECCCCcCCccc
Confidence 88888887776 345555555532 477777777765443 46777777777777777777666
Q ss_pred CccccCCCcccEEEcccCcCCc-cCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCc
Q 046265 160 PPILGKVQSLLSLGFDLNLLNG-VLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLN 238 (639)
Q Consensus 160 p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 238 (639)
|..+..+++|++|++++|.+++ .+|..+. .+++|+.|++++|++.+..|.++..+++|+
T Consensus 143 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--------------------~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 202 (306)
T 2z66_A 143 NGIFNGLSSLEVLKMAGNSFQENFLPDIFT--------------------ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 202 (306)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCT--------------------TCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hhhcccCcCCCEEECCCCccccccchhHHh--------------------hCcCCCEEECCCCCcCCcCHHHhcCCCCCC
Confidence 6777777777777777777765 3444444 344455566666666666667777777777
Q ss_pred eeccccccccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCC-CCCCEEeccCCcccccCCc-c-cc
Q 046265 239 IVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKL-YQLHKLDFSLNHIVGELPI-E-LG 315 (639)
Q Consensus 239 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l-~~L~~L~Ls~N~~~~~~p~-~-~~ 315 (639)
.|++++|.+++..+..+..+++|+.|++++|++ ++..|..+..+ ++|+.|++++|.+.+..+. + ..
T Consensus 203 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l-----------~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~ 271 (306)
T 2z66_A 203 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI-----------MTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQ 271 (306)
T ss_dssp EEECTTSCCSBCCSGGGTTCTTCCEEECTTSCC-----------CBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHH
T ss_pred EEECCCCccCccChhhccCcccCCEeECCCCCC-----------cccCHHHHHhhhccCCEEEccCCCeecccChHHHHH
Confidence 777777777776666677777777777555544 34556666666 3677777777777643211 0 11
Q ss_pred CCCCCCeeeccCccCcccCCcCcc
Q 046265 316 NLKSLNYRALNGNKVYGSLPRVLG 339 (639)
Q Consensus 316 ~l~~L~~L~l~~N~l~~~~p~~~~ 339 (639)
.+...+.+....+.+....|..+.
T Consensus 272 ~l~~~~~~~~~~~~~~C~~p~~~~ 295 (306)
T 2z66_A 272 WIKDQRQLLVEVERMECATPSDKQ 295 (306)
T ss_dssp HHHHTGGGBSCGGGCBEEESGGGT
T ss_pred HHHhhhhhhccccccccCCchhhC
Confidence 122333444444555555555443
No 97
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=3.9e-28 Score=252.59 Aligned_cols=275 Identities=21% Similarity=0.220 Sum_probs=204.1
Q ss_pred ccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCC
Q 046265 26 IGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLA 105 (639)
Q Consensus 26 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 105 (639)
-..++.....++++|.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|++++..|..|.++++|
T Consensus 27 ~~~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L- 102 (353)
T 2z80_A 27 SLSCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSL- 102 (353)
T ss_dssp CCEECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTC-
T ss_pred CCCCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCC-
Confidence 344566677999999998 6787665 489999999999996666689999999999999999998878888777743
Q ss_pred cccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCC-ccccCCCcccEEEcccCc-CCccC
Q 046265 106 IGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIP-PILGKVQSLLSLGFDLNL-LNGVL 183 (639)
Q Consensus 106 ~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~-l~~~~ 183 (639)
++|++++|++++..+..+.++++|++|+|++|++++..+ ..+..+++|++|++++|. +.+..
T Consensus 103 ----------------~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~ 166 (353)
T 2z80_A 103 ----------------EHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQ 166 (353)
T ss_dssp ----------------CEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred ----------------CEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccC
Confidence 589999999986555568899999999999999985433 378899999999999984 66555
Q ss_pred CccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccE
Q 046265 184 PPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTF 263 (639)
Q Consensus 184 p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 263 (639)
|..+. .+++|+.|++++|++.+..|..+..+++|++|++++|.++......+..+++|+.
T Consensus 167 ~~~~~--------------------~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 226 (353)
T 2z80_A 167 RKDFA--------------------GLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVEC 226 (353)
T ss_dssp TTTTT--------------------TCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEE
T ss_pred HHHcc--------------------CCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccE
Confidence 54444 4455667777888888888999999999999999999998766666677899999
Q ss_pred EeccCCcccccccCcCCccccccCcc---ccCCCCCCEEeccCCcccc----cCCccccCCCCCCeeeccCccCcccCCc
Q 046265 264 LDLSQNNFYGSLNFSMNNITRSIPPK---IGKLYQLHKLDFSLNHIVG----ELPIELGNLKSLNYRALNGNKVYGSLPR 336 (639)
Q Consensus 264 L~Ls~N~l~~~l~ls~n~~~~~~p~~---~~~l~~L~~L~Ls~N~~~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 336 (639)
|++++|.+.+ ..+.. ......++.++++++.+.+ .+|..+..+++|+.|++++|+++ .+|.
T Consensus 227 L~L~~n~l~~-----------~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~ 294 (353)
T 2z80_A 227 LELRDTDLDT-----------FHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPD 294 (353)
T ss_dssp EEEESCBCTT-----------CCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCT
T ss_pred EECCCCcccc-----------ccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCH
Confidence 9988887753 11111 1234456667777666654 24555666666666666666666 3443
Q ss_pred C-ccCCCCCCEEeCCCC
Q 046265 337 V-LGSISDLEYLDLSTN 352 (639)
Q Consensus 337 ~-~~~l~~L~~L~Ls~N 352 (639)
. +..+++|+.|++++|
T Consensus 295 ~~~~~l~~L~~L~L~~N 311 (353)
T 2z80_A 295 GIFDRLTSLQKIWLHTN 311 (353)
T ss_dssp TTTTTCTTCCEEECCSS
T ss_pred HHHhcCCCCCEEEeeCC
Confidence 3 356666666666664
No 98
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.96 E-value=2.5e-29 Score=260.55 Aligned_cols=170 Identities=20% Similarity=0.230 Sum_probs=146.4
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCceeE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 540 (639)
.++|+..++||+|+||.||+|+.+ +++.||||.+..... .....+.+.+|..++..+ +||||+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 467888999999999999999765 578999999875321 112345678899999887 79999999999999999999
Q ss_pred EecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCC
Q 046265 541 LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
||||+++|+|.+++...+ .+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+|+...
T Consensus 99 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 999999999999997643 478899999999999999999998 99999999999999999999999999998754
Q ss_pred CCCCCcceeeeeceeeCCC
Q 046265 621 PDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~~~~~~gt~~Y~APE 639 (639)
.........+||+.|||||
T Consensus 173 ~~~~~~~~~~gt~~y~aPE 191 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPE 191 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHH
T ss_pred cCCcccccccCCccccChh
Confidence 4444455678999999998
No 99
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.96 E-value=3.7e-29 Score=257.31 Aligned_cols=170 Identities=22% Similarity=0.334 Sum_probs=136.1
Q ss_pred hccCCCcceeccCCCceEEEEEc----CCCcEEEEEEccCCCC--ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCc
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL----PSWEIVAVKKFHSPHP--DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQ 537 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 537 (639)
.++|+..+.||+|+||.||+|+. .+++.||||.+..... .......+.+|+.++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46788889999999999999976 4789999999986432 12234567889999999999999999999999999
Q ss_pred eeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 538 SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
.|+||||+++|+|.+++...+ .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 999999999999999997643 367788999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCCCCcceeeeeceeeCCC
Q 046265 618 FLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~~~~~~~gt~~Y~APE 639 (639)
............+||+.|+|||
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE 191 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPE 191 (327)
T ss_dssp ---------CTTSSCCTTSCHH
T ss_pred ccccCCccccccCCCcCccCHh
Confidence 6543333344568999999998
No 100
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.96 E-value=8.1e-29 Score=250.79 Aligned_cols=169 Identities=25% Similarity=0.388 Sum_probs=141.6
Q ss_pred ccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCC-CChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPH-PDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
++|+..+.||+|+||.||+|+ ..+++.||||.+.... ......+.+.+|+.++++++||||+++++++..++..|+||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 567888999999999999996 4578999999986543 23345577899999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++|+|.+++...+ .+++..+..++.|++.|++|+|.. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 91 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp ECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 9999999999997654 478899999999999999999998 9999999999999999999999999999876533
Q ss_pred C-CCcceeeeeceeeCCC
Q 046265 623 S-SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~-~~~~~~~gt~~Y~APE 639 (639)
. ......+||+.|+|||
T Consensus 165 ~~~~~~~~~gt~~y~aPE 182 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPE 182 (294)
T ss_dssp ----------CCSSCCHH
T ss_pred cccccCccccCccccCHh
Confidence 2 2233467999999998
No 101
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.96 E-value=4.4e-29 Score=255.23 Aligned_cols=167 Identities=22% Similarity=0.345 Sum_probs=144.6
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
.++|+..+.||+|+||.||+|+. .+|+.||||.+.+... .....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 35788889999999999999965 4789999999874321 112345678899999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||+++|+|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp ECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 99999999999997643 477899999999999999999998 999999999999999999999999999987643
Q ss_pred CCCCcceeeeeceeeCCC
Q 046265 622 DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~~~~~~gt~~Y~APE 639 (639)
. ....+||+.|||||
T Consensus 159 ~---~~~~~gt~~y~aPE 173 (318)
T 1fot_A 159 V---TYTLCGTPDYIAPE 173 (318)
T ss_dssp C---BCCCCSCTTTCCHH
T ss_pred c---cccccCCccccCHh
Confidence 2 33568999999998
No 102
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.96 E-value=7.2e-29 Score=251.76 Aligned_cols=168 Identities=25% Similarity=0.317 Sum_probs=139.7
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCCh------------------------hhHHHHHHHHHHHhc
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDM------------------------VVQQAFSNEIKALTE 519 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~------------------------~~~~~~~~e~~~l~~ 519 (639)
++|+..+.||+|+||.||+|.. .+++.||||.+....... ...+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 5688889999999999999964 568999999987543111 113468899999999
Q ss_pred cccCceeeeEEEEEc--CCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCC
Q 046265 520 LRHRNVVKFYGFSFH--PRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISS 597 (639)
Q Consensus 520 l~H~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~ 597 (639)
++||||+++++++.+ .+..|+||||+++|+|.+++.. ..+++..+..++.|+++|++|||.. +|+||||||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 165 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKP 165 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCH
Confidence 999999999999987 5678999999999999876543 3578899999999999999999999 999999999
Q ss_pred CCeeeCCCCceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 598 KNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 598 ~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+||+++.++.+||+|||+++............+||+.|+|||
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE 207 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPE 207 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGG
T ss_pred HHEEECCCCCEEEecCCCccccccccccccCCcCCccccChh
Confidence 999999999999999999987764433344568999999998
No 103
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=4.5e-28 Score=248.94 Aligned_cols=195 Identities=26% Similarity=0.306 Sum_probs=114.4
Q ss_pred CCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCccc
Q 046265 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGS 108 (639)
Q Consensus 29 l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~ 108 (639)
.+++++|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++++++|
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L---- 152 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRL---- 152 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTC----
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCC----
Confidence 466777777777776 66777777777777777777777 67777777777777777777776 556666655532
Q ss_pred CCCCCcccCCCCccEEEccCCcCcccCCccccC---------CCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcC
Q 046265 109 MPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGH---------LSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLL 179 (639)
Q Consensus 109 lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 179 (639)
++|++++|++.+.+|..+.. +++|++|+|++|+++ .+|..++.+++|++|++++|.+
T Consensus 153 -------------~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l 218 (328)
T 4fcg_A 153 -------------RELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPL 218 (328)
T ss_dssp -------------CEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCC
T ss_pred -------------CEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCC
Confidence 46777776666677765543 555666666666555 4555555555555555555555
Q ss_pred CccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCC
Q 046265 180 NGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYP 259 (639)
Q Consensus 180 ~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 259 (639)
++ +|..+ ..+++|+.|++++|.+.+.+|..+.++++|+.|++++|.+.+.+|..++.++
T Consensus 219 ~~-l~~~l--------------------~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~ 277 (328)
T 4fcg_A 219 SA-LGPAI--------------------HHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLT 277 (328)
T ss_dssp CC-CCGGG--------------------GGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCT
T ss_pred Cc-Cchhh--------------------ccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCC
Confidence 43 22222 2233334444444444444454444444444444444444444443344444
Q ss_pred CccEEe
Q 046265 260 NLTFLD 265 (639)
Q Consensus 260 ~L~~L~ 265 (639)
+|++|+
T Consensus 278 ~L~~L~ 283 (328)
T 4fcg_A 278 QLEKLD 283 (328)
T ss_dssp TCCEEE
T ss_pred CCCEEe
Confidence 444444
No 104
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=5.1e-28 Score=248.55 Aligned_cols=232 Identities=18% Similarity=0.237 Sum_probs=197.8
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeee
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLY 86 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 86 (639)
....+++++|++. .+|+.++.+++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++++++|++|+++
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 4567899999998 88999999999999999999999 89999999999999999999999 899999999999999999
Q ss_pred cccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCC
Q 046265 87 CNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKV 166 (639)
Q Consensus 87 ~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 166 (639)
+|++.+.+|..+.... ++..+.++++| ++|+|++|+++ .+|..++++++|++|+|++|++++ +|..++.+
T Consensus 159 ~n~~~~~~p~~~~~~~------~~~~~~~l~~L--~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l 228 (328)
T 4fcg_A 159 ACPELTELPEPLASTD------ASGEHQGLVNL--QSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHL 228 (328)
T ss_dssp EETTCCCCCSCSEEEC-------CCCEEESTTC--CEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGC
T ss_pred CCCCccccChhHhhcc------chhhhccCCCC--CEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccC
Confidence 9999999998876521 23334455565 79999999998 889999999999999999999995 77789999
Q ss_pred CcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceecccccc
Q 046265 167 QSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNH 246 (639)
Q Consensus 167 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 246 (639)
++|++|++++|.+.+.+|..+..+++| +.|++++|++.+.+|..+.++++|+.|++++|.
T Consensus 229 ~~L~~L~Ls~n~~~~~~p~~~~~l~~L--------------------~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~ 288 (328)
T 4fcg_A 229 PKLEELDLRGCTALRNYPPIFGGRAPL--------------------KRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCV 288 (328)
T ss_dssp TTCCEEECTTCTTCCBCCCCTTCCCCC--------------------CEEECTTCTTCCBCCTTGGGCTTCCEEECTTCT
T ss_pred CCCCEEECcCCcchhhhHHHhcCCCCC--------------------CEEECCCCCchhhcchhhhcCCCCCEEeCCCCC
Confidence 999999999999999988877665554 555666777777788888888888888888888
Q ss_pred ccCcchhhhhcCCCccEEeccCCcc
Q 046265 247 LTGNIYEVFGIYPNLTFLDLSQNNF 271 (639)
Q Consensus 247 l~~~~~~~~~~l~~L~~L~Ls~N~l 271 (639)
+.+.+|..++.+++++.+++..|.+
T Consensus 289 ~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 289 NLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp TCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred chhhccHHHhhccCceEEeCCHHHH
Confidence 8888888888888888887665544
No 105
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.96 E-value=3.9e-29 Score=261.01 Aligned_cols=170 Identities=24% Similarity=0.272 Sum_probs=137.4
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCC-ChhhHHHHHHHHHH-HhccccCceeeeEEEEEcCCceeE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHP-DMVVQQAFSNEIKA-LTELRHRNVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~l 540 (639)
.++|+..++||+|+||+||+|+.+ +++.||||.+.+... .......+.+|..+ ++.++|||||++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357888999999999999999654 678999999975432 12233455667776 567899999999999999999999
Q ss_pred EecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCC
Q 046265 541 LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
||||+++|+|.+++...+ .+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 999999999999997644 367788899999999999999998 99999999999999999999999999998754
Q ss_pred CCCCCcceeeeeceeeCCC
Q 046265 621 PDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~~~~~~gt~~Y~APE 639 (639)
.........+||+.|||||
T Consensus 191 ~~~~~~~~~~gt~~y~aPE 209 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPE 209 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHH
T ss_pred cCCCccccccCCccccCHH
Confidence 4444455679999999998
No 106
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=1.8e-30 Score=281.28 Aligned_cols=213 Identities=21% Similarity=0.175 Sum_probs=111.0
Q ss_pred cEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCC
Q 046265 122 FHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSS 201 (639)
Q Consensus 122 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~ 201 (639)
++|+|++|.+++..|..|..+++|++|+|++|.+++..| ++.+++|++|++++|.+++..+ .++|+.|+++
T Consensus 37 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~-- 107 (487)
T 3oja_A 37 KELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA-- 107 (487)
T ss_dssp CEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC--
T ss_pred cEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc--
Confidence 677777777777666777777778888888777776544 7777777777777777764322 1455555554
Q ss_pred ccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCcccccccCcCCc
Q 046265 202 LVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNN 281 (639)
Q Consensus 202 ~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~ 281 (639)
+|.+.+..+. .+++|+.|++++|.+++..|..++.+++|+.|++++|.+
T Consensus 108 ------------------~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l---------- 156 (487)
T 3oja_A 108 ------------------NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEI---------- 156 (487)
T ss_dssp ------------------SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCC----------
T ss_pred ------------------CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCC----------
Confidence 4444433222 234444455555555444444444444555554333333
Q ss_pred cccccCcccc-CCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCCCCCccccc
Q 046265 282 ITRSIPPKIG-KLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKE 360 (639)
Q Consensus 282 ~~~~~p~~~~-~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~ 360 (639)
++..|..+. .+++|+.|+|++|.+++..+ ...+++|+.|+|++|.+++..| .+..+++|+.|++++|.+..
T Consensus 157 -~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~---- 228 (487)
T 3oja_A 157 -DTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL---- 228 (487)
T ss_dssp -CEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE----
T ss_pred -CCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc----
Confidence 223333333 34445555555555443311 2234455555555555543222 24444555555555533221
Q ss_pred CChhhhccccCCeeeccCCcCc
Q 046265 361 FPVELEKLVQLTELDLVITFWE 382 (639)
Q Consensus 361 ~p~~~~~l~~L~~l~l~~n~~~ 382 (639)
+|..+..+++|+.+++++|.+.
T Consensus 229 lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 229 IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp ECTTCCCCTTCCEEECTTCCBC
T ss_pred cchhhccCCCCCEEEcCCCCCc
Confidence 3334444445555555555443
No 107
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.7e-28 Score=251.45 Aligned_cols=167 Identities=19% Similarity=0.239 Sum_probs=146.0
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.++|+..+.||+|+||.||+|.. .+++.||+|.+... ......+.+|+.++++++||||+++++++.+.+..|+||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 80 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence 35788889999999999999965 46789999998743 234567889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC--CCceEEccccccccCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL--DYDAHVSDFGISKFLK 620 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~--~~~~kl~DfGla~~~~ 620 (639)
||+++|+|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++. ++.+||+|||+++.+.
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 81 EFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp CCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred EeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 9999999999997543 2578899999999999999999998 9999999999999987 7899999999998875
Q ss_pred CCCCCcceeeeeceeeCCC
Q 046265 621 PDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~~~~~~gt~~Y~APE 639 (639)
.. .......||+.|+|||
T Consensus 156 ~~-~~~~~~~gt~~y~aPE 173 (321)
T 1tki_A 156 PG-DNFRLLFTAPEYYAPE 173 (321)
T ss_dssp TT-CEEEEEESCGGGSCHH
T ss_pred CC-CccccccCChhhcCcH
Confidence 43 3334578999999998
No 108
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.96 E-value=4.9e-29 Score=260.62 Aligned_cols=168 Identities=18% Similarity=0.213 Sum_probs=140.9
Q ss_pred hccCCCcceeccCCCceEEEE------EcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc---cCceeeeEEEEEc
Q 046265 464 TNNFDAKYCIGTAGQASVYKA------ELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR---HRNVVKFYGFSFH 534 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~------~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~ 534 (639)
.++|...+.||+|+||.||+| ...+++.||||++.... ...+.+|++++.+++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 466778899999999999999 35567899999997532 345677888877776 9999999999999
Q ss_pred CCceeEEecccCCCChhHHhhcCC--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC--------
Q 046265 535 PRQSFLLYEYLGRGSLAIILSNDA--AIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL-------- 604 (639)
Q Consensus 535 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~-------- 604 (639)
++..|+||||+++|+|.+++.... ....++|..+..++.|+++||+|||.. +|+||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccc
Confidence 999999999999999999997422 234689999999999999999999998 9999999999999998
Q ss_pred ---CCceEEccccccccCCC--CCCCcceeeeeceeeCCC
Q 046265 605 ---DYDAHVSDFGISKFLKP--DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 605 ---~~~~kl~DfGla~~~~~--~~~~~~~~~gt~~Y~APE 639 (639)
++.+||+|||+|+.+.. ........+||++|||||
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE 255 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVE 255 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHH
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChH
Confidence 89999999999976532 222334568999999998
No 109
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.95 E-value=3.3e-29 Score=260.23 Aligned_cols=173 Identities=20% Similarity=0.275 Sum_probs=145.4
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCC---CChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCcee
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPH---PDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSF 539 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 539 (639)
.+.|+..+.||+|+||.||+|.. .+++.||||.+.... ......+.+.+|+.++++++|||||++++++.+++..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45688889999999999999954 578999999986321 11123567899999999999999999999999999999
Q ss_pred EEecccCCCChhHHhhcCC-CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc---eEEccccc
Q 046265 540 LLYEYLGRGSLAIILSNDA-AIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD---AHVSDFGI 615 (639)
Q Consensus 540 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~---~kl~DfGl 615 (639)
+||||+++|+|.+.+.... ....+++..+..++.|+++|++|||.. +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999988775432 223478899999999999999999998 9999999999999986554 99999999
Q ss_pred cccCCCCCCCcceeeeeceeeCCC
Q 046265 616 SKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 616 a~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
++............+||+.|+|||
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE 203 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPE 203 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHH
T ss_pred eeEecCCCeeecCCcCCcCccCHH
Confidence 988765443344578999999998
No 110
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.95 E-value=9.8e-29 Score=268.50 Aligned_cols=173 Identities=21% Similarity=0.266 Sum_probs=149.1
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCC-hhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPD-MVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
.++|...++||+|+||+||+|+. .+|+.||||++.+.... ....+.+.+|+.++++++|||||++++++...+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 46788889999999999999976 46899999999743211 12245688999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCC-CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCC
Q 046265 542 YEYLGRGSLAIILSNDAA-IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
|||+++|+|.+++..... ...+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999876432 34588999999999999999999998 99999999999999999999999999999876
Q ss_pred CCCCCcceeeeeceeeCCC
Q 046265 621 PDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~~~~~~gt~~Y~APE 639 (639)
.........+||+.|||||
T Consensus 341 ~~~~~~~~~~GT~~Y~APE 359 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPE 359 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHH
T ss_pred CCCcccccccCCccccChh
Confidence 5444445568999999998
No 111
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.95 E-value=1.5e-28 Score=250.98 Aligned_cols=168 Identities=19% Similarity=0.183 Sum_probs=141.5
Q ss_pred ccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 542 (639)
++|+..+.||+|+||+||+|... +++.||||++............+.+|+..+.++ +||||++++++|.+++..|+||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57888999999999999999665 789999999876554455555666777776665 8999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+ +++|.+++.... ..++|..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 137 e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp ECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred ecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 999 678988886543 3589999999999999999999998 9999999999999999999999999999876533
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
. ......||++|+|||
T Consensus 211 ~-~~~~~~gt~~y~aPE 226 (311)
T 3p1a_A 211 G-AGEVQEGDPRYMAPE 226 (311)
T ss_dssp -----CCCCCGGGCCGG
T ss_pred C-CCcccCCCccccCHh
Confidence 2 234467999999998
No 112
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.95 E-value=8.5e-29 Score=256.51 Aligned_cols=167 Identities=22% Similarity=0.227 Sum_probs=145.1
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
.++|+..+.||+|+||.||+|+. .+|+.||||.+..... .....+.+.+|+.++++++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 35788889999999999999965 4789999999864321 112345678999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 99999999999997653 377899999999999999999998 999999999999999999999999999987643
Q ss_pred CCCCcceeeeeceeeCCC
Q 046265 622 DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~~~~~~gt~~Y~APE 639 (639)
. ....+||+.|+|||
T Consensus 194 ~---~~~~~gt~~y~aPE 208 (350)
T 1rdq_E 194 R---TWTLCGTPEALAPE 208 (350)
T ss_dssp C---BCCCEECGGGCCHH
T ss_pred C---cccccCCccccCHH
Confidence 2 23578999999998
No 113
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.95 E-value=1.7e-28 Score=256.74 Aligned_cols=170 Identities=21% Similarity=0.368 Sum_probs=135.4
Q ss_pred hccCCCcceeccCCCceEEEEEcC----CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCcee
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP----SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSF 539 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 539 (639)
..+|+..+.||+|+||.||+|+.. ++..||||.++... .....+.|.+|+.++++++|||||++++++...+..|
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 357888999999999999999764 56789999997643 3445678999999999999999999999999999999
Q ss_pred EEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 540 LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 540 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
+||||+++|+|.++++... ..+++..+..++.|+++||+|||.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 123 lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 9999999999999997643 3588999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCC---cceeeeeceeeCCC
Q 046265 620 KPDSSN---WSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~~---~~~~~gt~~Y~APE 639 (639)
...... .....+++.|+|||
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE 220 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPE 220 (373)
T ss_dssp ----------------CTTSCHH
T ss_pred ccCCccceeccCCCcCCCccChh
Confidence 543221 12234577899998
No 114
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.95 E-value=2.6e-28 Score=250.85 Aligned_cols=169 Identities=21% Similarity=0.312 Sum_probs=146.2
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCCh----hhHHHHHHHHHHHhccccCceeeeEEEEEcCCce
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDM----VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS 538 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 538 (639)
.+.|+..+.||+|+||.||+|.. .+++.||||.+....... ...+.+.+|+.++++++||||+++++++...+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 35688889999999999999965 468999999997643221 2357789999999999999999999999999999
Q ss_pred eEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC----ceEEcccc
Q 046265 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY----DAHVSDFG 614 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~----~~kl~DfG 614 (639)
|+||||+++|+|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 99999999999999997543 478899999999999999999998 999999999999998877 79999999
Q ss_pred ccccCCCCCCCcceeeeeceeeCCC
Q 046265 615 ISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 615 la~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+++...... .....+||+.|+|||
T Consensus 164 ~a~~~~~~~-~~~~~~gt~~y~aPE 187 (326)
T 2y0a_A 164 LAHKIDFGN-EFKNIFGTPEFVAPE 187 (326)
T ss_dssp TCEECCTTS-CCCCCCSCTTTCCHH
T ss_pred CCeECCCCC-ccccccCCcCcCCce
Confidence 998765332 234568999999998
No 115
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2e-27 Score=255.74 Aligned_cols=246 Identities=20% Similarity=0.163 Sum_probs=114.4
Q ss_pred CCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCC
Q 046265 32 LKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPN 111 (639)
Q Consensus 32 L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~ 111 (639)
.+.++.++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L------- 125 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASL------- 125 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC-------
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccC-------
Confidence 344555555554 3444333 355555555555554445555555555555555555555444444444422
Q ss_pred CCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccC-cCCccCCccCcCC
Q 046265 112 SLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLN-LLNGVLPPSISNL 190 (639)
Q Consensus 112 ~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~~p~~~~~l 190 (639)
++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++| .+....+..|.++
T Consensus 126 ----------~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l 195 (452)
T 3zyi_A 126 ----------NTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGL 195 (452)
T ss_dssp ----------CEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTC
T ss_pred ----------CEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCC
Confidence 35555555555444444555555555555555555444444555555555555552 2222222223322
Q ss_pred CCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCc
Q 046265 191 SNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNN 270 (639)
Q Consensus 191 ~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 270 (639)
++ |+.|++++|++.+ +| .+..+++|+.|++++|.+++..+..|..+++|+.|++++|+
T Consensus 196 ~~--------------------L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~ 253 (452)
T 3zyi_A 196 FN--------------------LKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQ 253 (452)
T ss_dssp TT--------------------CCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSC
T ss_pred CC--------------------CCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCc
Confidence 22 2333333333322 12 23344444444444444444444444444445444433333
Q ss_pred ccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccC
Q 046265 271 FYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKV 330 (639)
Q Consensus 271 l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l 330 (639)
+ ++..|..+..+++|+.|+|++|++++..+..|..+++|+.|++++|.+
T Consensus 254 l-----------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 254 V-----------SLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302 (452)
T ss_dssp C-----------CEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCE
T ss_pred C-----------ceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCc
Confidence 2 223344444445555555555555444444444455555555555544
No 116
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.95 E-value=1e-28 Score=268.89 Aligned_cols=171 Identities=22% Similarity=0.271 Sum_probs=147.5
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
.++|+..++||+|+||.||+|.. .+|+.||||++..... .......+.+|+.++++++|||||++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 46788889999999999999965 5789999999864321 112345678999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||+++|+|.+++...+. ..+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+|+.+..
T Consensus 263 mEy~~gg~L~~~l~~~~~-~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQ-AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp ECCCCSCBHHHHHHSSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEcCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999976542 3478899999999999999999999 999999999999999999999999999987754
Q ss_pred CCCCcceeeeeceeeCCC
Q 046265 622 DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~~~~~~gt~~Y~APE 639 (639)
.. .....+||+.|||||
T Consensus 339 ~~-~~~~~~GT~~Y~APE 355 (576)
T 2acx_A 339 GQ-TIKGRVGTVGYMAPE 355 (576)
T ss_dssp TC-CEECCCSCGGGCCHH
T ss_pred Cc-cccccCCCccccCHH
Confidence 32 334568999999998
No 117
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.95 E-value=2.1e-28 Score=249.82 Aligned_cols=169 Identities=23% Similarity=0.360 Sum_probs=142.1
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
++|+..+.||+|+||.||+|.. .+++.||||++..........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 5688889999999999999965 468999999998766555566778999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
|++++++.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 83 YCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp CCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred eCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 999999999887543 478899999999999999999998 99999999999999999999999999998876444
Q ss_pred CCcceeeeeceeeCCC
Q 046265 624 SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~~~~~~~gt~~Y~APE 639 (639)
......+||+.|+|||
T Consensus 157 ~~~~~~~~~~~y~aPE 172 (311)
T 4agu_A 157 DYYDDEVATRWYRSPE 172 (311)
T ss_dssp ---------GGGCCHH
T ss_pred cccCCCcCCccccChH
Confidence 4445678999999998
No 118
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.95 E-value=1.8e-28 Score=251.01 Aligned_cols=171 Identities=22% Similarity=0.333 Sum_probs=132.8
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
..+|+..+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.++++++|||||++++++..++..|+||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 46788899999999999999965 4689999999975432 223456789999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCC---CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 543 EYLGRGSLAIILSNDA---AIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
||++ |+|.+++.... ....+++..+..++.|+++||+|||.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9998 69998886432 223578899999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCCcceeeeeceeeCCC
Q 046265 620 KPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~~~~~~~gt~~Y~APE 639 (639)
..........+||+.|+|||
T Consensus 159 ~~~~~~~~~~~~t~~y~aPE 178 (317)
T 2pmi_A 159 GIPVNTFSSEVVTLWYRAPD 178 (317)
T ss_dssp TSCCCCCCCCCSCCTTCCHH
T ss_pred CCCcccCCCCcccccccCch
Confidence 54433444568999999998
No 119
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.95 E-value=3e-28 Score=250.30 Aligned_cols=169 Identities=23% Similarity=0.374 Sum_probs=141.9
Q ss_pred ccCCCcceeccCCCceEEEEEcC----CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeE
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP----SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 540 (639)
.+|+..+.||+|+||.||+|... .+..||||.+.... .....+.|.+|+.++++++||||+++++++.+++..|+
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 56777899999999999999763 34569999997543 34456779999999999999999999999999999999
Q ss_pred EecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCC
Q 046265 541 LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
||||+++|+|.++++... ..+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 128 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 999999999999997543 3588899999999999999999998 99999999999999999999999999998775
Q ss_pred CCCCC---cceeeeeceeeCCC
Q 046265 621 PDSSN---WSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~---~~~~~gt~~Y~APE 639 (639)
..... .....+|+.|+|||
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE 224 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPE 224 (325)
T ss_dssp ----CCEECC---CCGGGSCHH
T ss_pred cCccceeeccCCCCcccccCHh
Confidence 43222 12245678899998
No 120
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.95 E-value=1.2e-28 Score=252.91 Aligned_cols=169 Identities=27% Similarity=0.375 Sum_probs=143.4
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.++|+..+.||+|+||.||+|.. .+++.||||.+..... ....+.+.+|+.++++++|||||++++++.+++..|+||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 35788889999999999999965 4789999999875432 223456889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++|+|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 85 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 85 EYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp ECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 9999999999987543 478899999999999999999998 9999999999999999999999999999865322
Q ss_pred C--CCcceeeeeceeeCCC
Q 046265 623 S--SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~--~~~~~~~gt~~Y~APE 639 (639)
. ......+||+.|+|||
T Consensus 159 ~~~~~~~~~~gt~~y~aPE 177 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPE 177 (323)
T ss_dssp TEECCBCSCCSCGGGSCHH
T ss_pred CcccccCCCccCcCccCcH
Confidence 1 2234568999999998
No 121
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.95 E-value=4.4e-29 Score=267.99 Aligned_cols=170 Identities=22% Similarity=0.241 Sum_probs=136.6
Q ss_pred hccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCC-CChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPH-PDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
.++|+..+.||+|+||.||+|. ..+++.||||.+.... ........+.+|+.++++++||||++++++|...+..|+|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 4678889999999999999995 4578999999987431 1122345678899999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeecCCCCCeeeCCCCceEEccccccccCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH-DYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+|+...
T Consensus 227 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp ECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999997643 47889999999999999999998 6 89999999999999999999999999998755
Q ss_pred CCCCCcceeeeeceeeCCC
Q 046265 621 PDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~~~~~~gt~~Y~APE 639 (639)
.........+||+.|||||
T Consensus 301 ~~~~~~~~~~gt~~y~aPE 319 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPE 319 (446)
T ss_dssp C-----CCSSSCGGGCCHH
T ss_pred CCCcccccccCCccccCHh
Confidence 4444455678999999998
No 122
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.95 E-value=1.8e-28 Score=264.34 Aligned_cols=169 Identities=22% Similarity=0.317 Sum_probs=132.8
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcC-----Cc
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP-----RQ 537 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 537 (639)
.++|+..+.||+|+||.||+|.. .+++.||||++..........+.+.+|+.++++++|||||++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 36788899999999999999954 5789999999976555555667889999999999999999999999543 46
Q ss_pred eeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 538 SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
.|+||||+ +|+|.+++.... .+++..+..++.|++.||+|||.. +|+||||||+|||++.++.+||+|||+|+
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEEecc-ccchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccch
Confidence 89999998 578999887643 478899999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCC---------------------------CCcceeeeeceeeCCC
Q 046265 618 FLKPDS---------------------------SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~---------------------------~~~~~~~gt~~Y~APE 639 (639)
.+.... ......+||++|||||
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 253 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPE 253 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHH
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChH
Confidence 764221 1234468999999998
No 123
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.95 E-value=3e-28 Score=249.76 Aligned_cols=170 Identities=21% Similarity=0.349 Sum_probs=145.6
Q ss_pred ccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC--ceeEE
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR--QSFLL 541 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv 541 (639)
++|...+.||+|+||.||+|... +++.||||++..... ....+.+.+|++++++++||||+++++++...+ ..|+|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 56778899999999999999654 589999999875331 223466789999999999999999999998765 67999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee----CCCCceEEccccccc
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL----GLDYDAHVSDFGISK 617 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill----~~~~~~kl~DfGla~ 617 (639)
|||+++|+|.+++........+++..+..++.|++.|++|||.. +|+||||||+||++ +.++.+||+|||+|+
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999998765544589999999999999999999999 99999999999999 778889999999998
Q ss_pred cCCCCCCCcceeeeeceeeCCC
Q 046265 618 FLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~~~~~~~gt~~Y~APE 639 (639)
...... .....+||+.|+|||
T Consensus 165 ~~~~~~-~~~~~~gt~~y~aPE 185 (319)
T 4euu_A 165 ELEDDE-QFVSLYGTEEYLHPD 185 (319)
T ss_dssp ECCTTC-CBCCCCSCGGGCCHH
T ss_pred ecCCCC-ceeecccCCCccCHH
Confidence 775433 234567999999998
No 124
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.95 E-value=1.1e-28 Score=253.90 Aligned_cols=167 Identities=22% Similarity=0.347 Sum_probs=143.6
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.+|...+.||+|+||.||+|.. .+++.||||.+..... .......+.+|+.+++.++||||+++++++..++..|+||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5678889999999999999964 6789999999864211 1122356889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+ +|++.+++...+ .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 89 E~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp CCC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred ECC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 999 788988886543 478899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
......+||+.|+|||
T Consensus 162 -~~~~~~~gt~~y~aPE 177 (336)
T 3h4j_B 162 -NFLKTSCGSPNYAAPE 177 (336)
T ss_dssp -BTTCCCTTSTTTSCGG
T ss_pred -cccccccCCcCcCCHH
Confidence 2334568999999998
No 125
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.95 E-value=2.3e-28 Score=250.92 Aligned_cols=168 Identities=30% Similarity=0.422 Sum_probs=141.8
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCc----ee
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQ----SF 539 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~----~~ 539 (639)
.++|+..+.||+|+||.||+|+.. ++.||||++... ......+.+|+.++++++|||||++++++..... .|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 356788899999999999999876 689999998642 2334456779999999999999999999987543 69
Q ss_pred EEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhC-------CCCCeEeecCCCCCeeeCCCCceEEcc
Q 046265 540 LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD-------YFPPIVHRDISSKNVLLGLDYDAHVSD 612 (639)
Q Consensus 540 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-------~~~~iiHrdlk~~Nill~~~~~~kl~D 612 (639)
+||||+++|+|.++++.. .++|..+..++.|+++|++|||.. +.++|+||||||+||+++.++.+||+|
T Consensus 99 lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 999999999999999753 388999999999999999999976 234899999999999999999999999
Q ss_pred ccccccCCCCCC--CcceeeeeceeeCCC
Q 046265 613 FGISKFLKPDSS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 613 fGla~~~~~~~~--~~~~~~gt~~Y~APE 639 (639)
||+|+.+..... .....+||+.|+|||
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE 203 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPE 203 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHH
T ss_pred CCcccccccccCccccccCccCccccCHh
Confidence 999987654322 233468999999998
No 126
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=3.6e-27 Score=252.80 Aligned_cols=246 Identities=22% Similarity=0.186 Sum_probs=118.6
Q ss_pred CCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCC
Q 046265 32 LKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPN 111 (639)
Q Consensus 32 L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~ 111 (639)
.+.++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L------- 114 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANL------- 114 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSC-------
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccC-------
Confidence 445555555554 4444443 455555555555554444555555555555555555555444555444422
Q ss_pred CCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCc-CCccCCccCcCC
Q 046265 112 SLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNL-LNGVLPPSISNL 190 (639)
Q Consensus 112 ~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l 190 (639)
++|+|++|++++..+..|..+++|++|+|++|.++...+..|..+++|+.|++++|. +....+..|.++
T Consensus 115 ----------~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l 184 (440)
T 3zyj_A 115 ----------NTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGL 184 (440)
T ss_dssp ----------CEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTC
T ss_pred ----------CEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcc
Confidence 355555555554444455555555555555555554444455555555555555532 222222233333
Q ss_pred CCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCc
Q 046265 191 SNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNN 270 (639)
Q Consensus 191 ~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 270 (639)
++|+ .|++++|++. .+| .+..+++|+.|+|++|.+++..+..|..+++|+.|++++|+
T Consensus 185 ~~L~--------------------~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~ 242 (440)
T 3zyj_A 185 SNLR--------------------YLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQ 242 (440)
T ss_dssp SSCC--------------------EEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred cccC--------------------eecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCc
Confidence 3333 3333333332 122 23344444444444444444444444444445544433333
Q ss_pred ccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccC
Q 046265 271 FYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKV 330 (639)
Q Consensus 271 l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l 330 (639)
+ ++..|..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+
T Consensus 243 l-----------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 291 (440)
T 3zyj_A 243 I-----------QVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 291 (440)
T ss_dssp C-----------CEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCE
T ss_pred e-----------eEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCc
Confidence 2 223334444445555555555555444444444555555555555544
No 127
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.95 E-value=2.7e-28 Score=243.67 Aligned_cols=167 Identities=21% Similarity=0.369 Sum_probs=145.1
Q ss_pred ccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEecc
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 544 (639)
++|+..+.||+|+||.||+|...+++.||||++..... ..+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc---CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 56778899999999999999988889999999985432 346789999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC-
Q 046265 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS- 623 (639)
Q Consensus 545 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~- 623 (639)
+++|+|.+++.... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 87 MEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp CTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 99999999997644 2578899999999999999999998 99999999999999999999999999998764321
Q ss_pred CCcceeeeeceeeCCC
Q 046265 624 SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~~~~~~~gt~~Y~APE 639 (639)
.......||+.|+|||
T Consensus 162 ~~~~~~~~~~~y~aPE 177 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPE 177 (269)
T ss_dssp HSTTSTTCCGGGCCHH
T ss_pred ccccCcccccccCCHH
Confidence 1222345788999998
No 128
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.95 E-value=2.4e-29 Score=259.80 Aligned_cols=163 Identities=17% Similarity=0.142 Sum_probs=134.0
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCC------ChhhHHHHHHHHHHHhccc---------cCceeee
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHP------DMVVQQAFSNEIKALTELR---------HRNVVKF 528 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~---------H~niv~l 528 (639)
.++|+..+.||+|+||+||+|+. +|+.||||++..... .....+.+.+|+.++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35677889999999999999987 679999999986532 1223367889999998886 7777777
Q ss_pred EEEEE-----------------c-------------CCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHH
Q 046265 529 YGFSF-----------------H-------------PRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANT 578 (639)
Q Consensus 529 ~~~~~-----------------~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~ 578 (639)
.+.+. + .+..|+||||+++|++.+.+.. ..+++..+..++.|++.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 66543 2 6789999999999976666643 246889999999999999
Q ss_pred HHHHH-hCCCCCeEeecCCCCCeeeCCCC--------------------ceEEccccccccCCCCCCCcceeeeeceeeC
Q 046265 579 LSYMH-HDYFPPIVHRDISSKNVLLGLDY--------------------DAHVSDFGISKFLKPDSSNWSEFVGTFGYVA 637 (639)
Q Consensus 579 l~~lH-~~~~~~iiHrdlk~~Nill~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~A 637 (639)
|+||| .. +|+||||||+|||++.++ .+||+|||+|+.... ...+||+.|||
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-----~~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-----GIVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-----TEEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-----CcEEEeecccC
Confidence 99999 78 999999999999999887 899999999987642 24589999999
Q ss_pred CC
Q 046265 638 PI 639 (639)
Q Consensus 638 PE 639 (639)
||
T Consensus 246 PE 247 (336)
T 2vuw_A 246 ED 247 (336)
T ss_dssp SG
T ss_pred hh
Confidence 98
No 129
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.95 E-value=7.9e-28 Score=252.37 Aligned_cols=168 Identities=21% Similarity=0.301 Sum_probs=145.7
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.+.|+..+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.++++++|||||++++++.+.+..|+||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 45788899999999999999955 578999999987543 334567899999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC--CCceEEccccccccCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL--DYDAHVSDFGISKFLK 620 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~--~~~~kl~DfGla~~~~ 620 (639)
||+++|+|.+++.... ..+++..+..++.|++.||+|||.. +|+||||||+||+++. .+.+||+|||+|+.+.
T Consensus 128 E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 128 EFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp ECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 9999999999987543 2478899999999999999999998 9999999999999974 4789999999998875
Q ss_pred CCCCCcceeeeeceeeCCC
Q 046265 621 PDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~~~~~~gt~~Y~APE 639 (639)
.. ......+||+.|+|||
T Consensus 203 ~~-~~~~~~~gt~~y~aPE 220 (387)
T 1kob_A 203 PD-EIVKVTTATAEFAAPE 220 (387)
T ss_dssp TT-SCEEEECSSGGGCCHH
T ss_pred CC-cceeeeccCCCccCch
Confidence 43 2334568999999998
No 130
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=3.5e-27 Score=240.24 Aligned_cols=246 Identities=23% Similarity=0.254 Sum_probs=156.5
Q ss_pred CCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccc--cCccccCCCCCCcccC
Q 046265 32 LKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGW--LPSSFGNLNNLAIGSM 109 (639)
Q Consensus 32 L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~~~l 109 (639)
-+.++.+++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+++.. .|..+..+++
T Consensus 9 ~~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~------ 79 (306)
T 2z66_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTS------ 79 (306)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSC------
T ss_pred CCEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccc------
Confidence 357888888887 5676554 6888888888888843333478888888888888887732 2444444442
Q ss_pred CCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCC-ccccCCCcccEEEcccCcCCccCCccCc
Q 046265 110 PNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIP-PILGKVQSLLSLGFDLNLLNGVLPPSIS 188 (639)
Q Consensus 110 p~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 188 (639)
| ++|++++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..|..+.
T Consensus 80 ---------L--~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 147 (306)
T 2z66_A 80 ---------L--KYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 147 (306)
T ss_dssp ---------C--CEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTT
T ss_pred ---------c--CEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcc
Confidence 2 47778877776 456667777777777777777765444 4566666666666666666555444333
Q ss_pred CCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccC-cchhhhhcCCCccEEecc
Q 046265 189 NLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTG-NIYEVFGIYPNLTFLDLS 267 (639)
Q Consensus 189 ~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls 267 (639)
.+++|++|++++|.+++ ..|..+..+++|++|+++
T Consensus 148 --------------------------------------------~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls 183 (306)
T 2z66_A 148 --------------------------------------------GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 183 (306)
T ss_dssp --------------------------------------------TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECT
T ss_pred --------------------------------------------cCcCCCEEECCCCccccccchhHHhhCcCCCEEECC
Confidence 33344444444444433 233344444555555544
Q ss_pred CCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCC-CCCE
Q 046265 268 QNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSIS-DLEY 346 (639)
Q Consensus 268 ~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~ 346 (639)
+|.+ ++..|..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|++.+..|..+..++ +|+.
T Consensus 184 ~n~l-----------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~ 252 (306)
T 2z66_A 184 QCQL-----------EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAF 252 (306)
T ss_dssp TSCC-----------CEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCE
T ss_pred CCCc-----------CCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCE
Confidence 4333 233345555666666666666666655555667777777777777777777777777774 7888
Q ss_pred EeCCCCC
Q 046265 347 LDLSTNY 353 (639)
Q Consensus 347 L~Ls~N~ 353 (639)
|++++|+
T Consensus 253 L~L~~N~ 259 (306)
T 2z66_A 253 LNLTQND 259 (306)
T ss_dssp EECTTCC
T ss_pred EEccCCC
Confidence 8888754
No 131
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.95 E-value=1e-27 Score=244.22 Aligned_cols=167 Identities=25% Similarity=0.378 Sum_probs=139.8
Q ss_pred ccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEecc
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 544 (639)
.+|...+.||+|+||.||+|.... .+|||.++.........+.+.+|+.++++++||||+++++++. .+..++||||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~ 112 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQW 112 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred cceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEec
Confidence 567888999999999999997653 5899998865555566678999999999999999999999865 4568999999
Q ss_pred cCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC--
Q 046265 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD-- 622 (639)
Q Consensus 545 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~-- 622 (639)
+++|+|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+|+.....
T Consensus 113 ~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 113 CEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred CCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 99999999997543 3588899999999999999999998 9999999999999999999999999999865421
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
........||+.|+|||
T Consensus 188 ~~~~~~~~gt~~y~aPE 204 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPE 204 (307)
T ss_dssp ------CCCCTTSCCHH
T ss_pred cccccCCCCCcceECcc
Confidence 12234468999999998
No 132
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.95 E-value=1e-27 Score=246.23 Aligned_cols=159 Identities=26% Similarity=0.343 Sum_probs=124.8
Q ss_pred cceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc-cCceeeeEEEEEcCCceeEEecccCC
Q 046265 470 KYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR-HRNVVKFYGFSFHPRQSFLLYEYLGR 547 (639)
Q Consensus 470 ~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~ 547 (639)
.+.||+|+||.||+|.. .+++.||||.+.. .....+.+|+.++.+++ ||||+++++++.+++..|+||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK-----RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEG-----GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEECh-----hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 47899999999999965 5689999999864 23456788999999997 99999999999999999999999999
Q ss_pred CChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC---ceEEccccccccCCCCCC
Q 046265 548 GSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY---DAHVSDFGISKFLKPDSS 624 (639)
Q Consensus 548 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~---~~kl~DfGla~~~~~~~~ 624 (639)
|+|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++ .+||+|||+++.......
T Consensus 91 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 91 GELFERIKKKK---HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp CBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 99999998653 478899999999999999999998 999999999999997665 899999999987665544
Q ss_pred CcceeeeeceeeCCC
Q 046265 625 NWSEFVGTFGYVAPI 639 (639)
Q Consensus 625 ~~~~~~gt~~Y~APE 639 (639)
.....+||+.|+|||
T Consensus 165 ~~~~~~~t~~y~aPE 179 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPE 179 (325)
T ss_dssp ---------------
T ss_pred cccccCCCcCccCHH
Confidence 455678999999998
No 133
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.95 E-value=4.2e-28 Score=259.07 Aligned_cols=169 Identities=22% Similarity=0.344 Sum_probs=143.1
Q ss_pred hccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcC-----Cc
Q 046265 464 TNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP-----RQ 537 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 537 (639)
.++|...+.||+|+||.||+|. ..+++.||||++..........+.+.+|+.++++++|||||++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 4678888999999999999995 45688999999986555555667889999999999999999999999876 56
Q ss_pred eeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 538 SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
.|+||||++ |+|.+++.... .+++..+..++.|+++||+|||.. +|+||||||+||+++.++.+||+|||+|+
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~ 177 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI---FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLAR 177 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEecCC-cCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence 899999996 69999997643 478899999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCC----------------------CcceeeeeceeeCCC
Q 046265 618 FLKPDSS----------------------NWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~----------------------~~~~~~gt~~Y~APE 639 (639)
....... .....+||++|+|||
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 221 (432)
T 3n9x_A 178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPE 221 (432)
T ss_dssp EC-------------------------------CCCCCTTCCHH
T ss_pred cccccccccccccccccccccccccchhccccCCCCCccccCHH
Confidence 7643221 135578999999998
No 134
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.95 E-value=3.8e-28 Score=250.50 Aligned_cols=171 Identities=20% Similarity=0.330 Sum_probs=147.2
Q ss_pred HHhccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCCh------hhHHHHHHHHHHHhccccCceeeeEEEEEc
Q 046265 462 RATNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDM------VVQQAFSNEIKALTELRHRNVVKFYGFSFH 534 (639)
Q Consensus 462 ~~~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 534 (639)
...++|+..+.||+|+||.||+|. ..+++.||||.+....... ...+.+.+|+.++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 346788999999999999999996 5678999999998653211 123456789999999999999999999999
Q ss_pred CCceeEEecccCCC-ChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 046265 535 PRQSFLLYEYLGRG-SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDF 613 (639)
Q Consensus 535 ~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~Df 613 (639)
.+..++||||+.+| +|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+||
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 99999999999777 9999997654 478899999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCcceeeeeceeeCCC
Q 046265 614 GISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 614 Gla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
|+++.+.... .....+||+.|+|||
T Consensus 175 g~a~~~~~~~-~~~~~~gt~~y~aPE 199 (335)
T 3dls_A 175 GSAAYLERGK-LFYTFCGTIEYCAPE 199 (335)
T ss_dssp TTCEECCTTC-CBCEECSCGGGCCHH
T ss_pred ccceECCCCC-ceeccCCCccccChh
Confidence 9998775432 334578999999998
No 135
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.95 E-value=3.7e-28 Score=253.35 Aligned_cols=173 Identities=21% Similarity=0.322 Sum_probs=145.0
Q ss_pred HhccCCCcceeccCCCceEEEEE------cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcC
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAE------LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHP 535 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~ 535 (639)
..++|+..+.||+|+||.||+|+ ..+++.||||++.... .....+.+.+|++++.++ +|||||+++++|.+.
T Consensus 20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 98 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 98 (359)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence 46788889999999999999996 2356889999997543 334456789999999999 799999999999876
Q ss_pred Cc-eeEEecccCCCChhHHhhcCCC-------------------------------------------------------
Q 046265 536 RQ-SFLLYEYLGRGSLAIILSNDAA------------------------------------------------------- 559 (639)
Q Consensus 536 ~~-~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------- 559 (639)
+. .++||||+++|+|.++++....
T Consensus 99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
T 3vhe_A 99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178 (359)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence 54 8999999999999999976432
Q ss_pred --------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCCC--Cccee
Q 046265 560 --------IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS--NWSEF 629 (639)
Q Consensus 560 --------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~--~~~~~ 629 (639)
...+++..+..++.|+++||+|||.. +|+||||||+||+++.++.+||+|||+++.+..... .....
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 255 (359)
T 3vhe_A 179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255 (359)
T ss_dssp -----CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--C
T ss_pred cccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhcccc
Confidence 11288999999999999999999999 999999999999999999999999999987643322 23346
Q ss_pred eeeceeeCCC
Q 046265 630 VGTFGYVAPI 639 (639)
Q Consensus 630 ~gt~~Y~APE 639 (639)
.||+.|||||
T Consensus 256 ~~t~~y~aPE 265 (359)
T 3vhe_A 256 RLPLKWMAPE 265 (359)
T ss_dssp EECGGGCCHH
T ss_pred CCCceeEChh
Confidence 7899999998
No 136
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.95 E-value=4.8e-28 Score=252.31 Aligned_cols=166 Identities=28% Similarity=0.344 Sum_probs=135.1
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|+.++++++|||||++++++..++..|+||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 356788899999999999999654 789999999975432 2356789999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc--eEEccccccccCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD--AHVSDFGISKFLK 620 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~--~kl~DfGla~~~~ 620 (639)
||+++|+|.+++...+ .+++..+..++.|++.|++|||.. +|+||||||+||+++.++. +||+|||+|+...
T Consensus 96 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 96 EYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred EeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 9999999999987643 478899999999999999999998 9999999999999987765 9999999998543
Q ss_pred CCCCCcceeeeeceeeCCC
Q 046265 621 PDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~~~~~~gt~~Y~APE 639 (639)
.. ......+||+.|+|||
T Consensus 170 ~~-~~~~~~~gt~~y~aPE 187 (361)
T 3uc3_A 170 LH-SQPKSTVGTPAYIAPE 187 (361)
T ss_dssp ------------CTTSCHH
T ss_pred cc-CCCCCCcCCCCcCChh
Confidence 22 2234568999999998
No 137
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.95 E-value=3.7e-28 Score=261.01 Aligned_cols=168 Identities=23% Similarity=0.386 Sum_probs=145.9
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.+|...+.||+|+||.||+|.. .+|+.||||.+..... .....+.+.+|+.+++.++||||+++++++...+..|+||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 5677788999999999999965 4789999999874321 1123457889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++|+|.+++...+ .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 96 E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 96 EYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp ECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 9999999999997643 478899999999999999999998 9999999999999999999999999999876543
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
......+||+.|+|||
T Consensus 170 -~~~~~~~gt~~y~aPE 185 (476)
T 2y94_A 170 -EFLRTSCGSPNYAAPE 185 (476)
T ss_dssp -CCBCCCCSCSTTCCHH
T ss_pred -ccccccCCCcCeEChh
Confidence 2334578999999998
No 138
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.95 E-value=5.1e-28 Score=250.61 Aligned_cols=173 Identities=24% Similarity=0.415 Sum_probs=146.4
Q ss_pred HhccCCCcceeccCCCceEEEEEcC------CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAELP------SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR 536 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 536 (639)
..++|+..+.||+|+||.||+|+.. +++.||||.++... .....+.+.+|+.++++++||||+++++++..++
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 4678888999999999999999764 34889999997543 3445677899999999999999999999999999
Q ss_pred ceeEEecccCCCChhHHhhcCCC---------------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecC
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAA---------------------IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDI 595 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdl 595 (639)
..|+||||+++|+|.+++..... ...+++..+..++.|+++|++|||.. +|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 99999999999999999975321 14588999999999999999999998 9999999
Q ss_pred CCCCeeeCCCCceEEccccccccCCCCC--CCcceeeeeceeeCCC
Q 046265 596 SSKNVLLGLDYDAHVSDFGISKFLKPDS--SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 596 k~~Nill~~~~~~kl~DfGla~~~~~~~--~~~~~~~gt~~Y~APE 639 (639)
||+||+++.++.+||+|||+++...... .......||+.|+|||
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE 246 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPE 246 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHH
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChh
Confidence 9999999999999999999998654321 1223457899999998
No 139
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.95 E-value=6.2e-28 Score=252.42 Aligned_cols=162 Identities=22% Similarity=0.309 Sum_probs=135.7
Q ss_pred cceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEecccCCC
Q 046265 470 KYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRG 548 (639)
Q Consensus 470 ~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 548 (639)
.+.||+|+||.||+|.. .+|+.||||.+.... ....+.+.+|+.++++++|||||++++++.+.+..|+||||+++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 56899999999999964 578999999997643 345677899999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee--CCCCceEEccccccccCCCCCCCc
Q 046265 549 SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL--GLDYDAHVSDFGISKFLKPDSSNW 626 (639)
Q Consensus 549 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill--~~~~~~kl~DfGla~~~~~~~~~~ 626 (639)
+|.+++.... ..+++..+..++.|+++||+|||.. +|+||||||+||++ +.++.+||+|||+++.+.... ..
T Consensus 172 ~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~-~~ 245 (373)
T 2x4f_A 172 ELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-KL 245 (373)
T ss_dssp EEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-BC
T ss_pred cHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-cc
Confidence 9998886543 2478899999999999999999998 99999999999999 567899999999998775432 23
Q ss_pred ceeeeeceeeCCC
Q 046265 627 SEFVGTFGYVAPI 639 (639)
Q Consensus 627 ~~~~gt~~Y~APE 639 (639)
...+||+.|+|||
T Consensus 246 ~~~~gt~~y~aPE 258 (373)
T 2x4f_A 246 KVNFGTPEFLAPE 258 (373)
T ss_dssp CCCCSSCTTCCHH
T ss_pred ccccCCCcEeChh
Confidence 3457999999998
No 140
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.95 E-value=5.7e-28 Score=254.80 Aligned_cols=172 Identities=16% Similarity=0.232 Sum_probs=147.5
Q ss_pred hccCCCcceeccC--CCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeE
Q 046265 464 TNNFDAKYCIGTA--GQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 464 ~~~f~~~~~ig~g--~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 540 (639)
..+|+..+.||+| +||.||+|+.. +++.||||++..........+.+.+|+.++++++|||||++++++.+++..|+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3567888999999 99999999654 78999999998655455566778899999999999999999999999999999
Q ss_pred EecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCC
Q 046265 541 LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
|||||++|+|.+++..... ..+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||.+....
T Consensus 104 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM-DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEccCCCCHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 9999999999999976432 3478899999999999999999998 99999999999999999999999999886542
Q ss_pred CCC-------CCcceeeeeceeeCCC
Q 046265 621 PDS-------SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~-------~~~~~~~gt~~Y~APE 639 (639)
... ......+||+.|+|||
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE 205 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPE 205 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHH
T ss_pred cccccccccccccccccccccccCHH
Confidence 211 1122347999999998
No 141
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.95 E-value=4.5e-28 Score=254.21 Aligned_cols=169 Identities=19% Similarity=0.304 Sum_probs=143.4
Q ss_pred ccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
++|...+.||+|+||.||+|... +++.||||.++... .....+.|.+|+.++++++|||||+++++|..++..|+|||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS-CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 56777889999999999999765 78999999987542 23345578899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
|+++|+|.++++..+ ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++......
T Consensus 193 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp CCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred cCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 999999999997543 2478899999999999999999998 99999999999999999999999999998654321
Q ss_pred C--CcceeeeeceeeCCC
Q 046265 624 S--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~--~~~~~~gt~~Y~APE 639 (639)
. ......+++.|+|||
T Consensus 268 ~~~~~~~~~~~~~y~aPE 285 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPE 285 (377)
T ss_dssp EECCSSCCEEEGGGSCHH
T ss_pred eeecCCCCCCCcCcCCHh
Confidence 1 111234678899998
No 142
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.95 E-value=6.5e-28 Score=248.57 Aligned_cols=170 Identities=25% Similarity=0.387 Sum_probs=142.9
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.++|+..+.||+|+||.||+|.. .+++.||||++..........+.+.+|+.++++++||||+++++++...+..|+||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 35678889999999999999965 45899999999776555556677889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||++++++.++..... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 104 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp ECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 9999999998876543 478899999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
.......+||+.|+|||
T Consensus 178 ~~~~~~~~~t~~y~aPE 194 (331)
T 4aaa_A 178 GEVYDDEVATRWYRAPE 194 (331)
T ss_dssp ------CCCCCTTCCHH
T ss_pred ccccCCCcCCccccCcc
Confidence 44445568999999998
No 143
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.95 E-value=8.7e-28 Score=248.23 Aligned_cols=165 Identities=22% Similarity=0.303 Sum_probs=141.2
Q ss_pred HhccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCceeE
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 540 (639)
..++|+..+.||+|+||.||+|.. .+++.||||.+...... ..+|++++.++ +||||+++++++.+++..|+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 356788899999999999999965 46899999999764322 34688888887 79999999999999999999
Q ss_pred EecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC----CceEEcccccc
Q 046265 541 LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD----YDAHVSDFGIS 616 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~----~~~kl~DfGla 616 (639)
||||+++|+|.+++...+ .+++..+..++.|++.|++|||.. +|+||||||+||++.++ +.+||+|||++
T Consensus 94 v~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp EECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 999999999999997653 478899999999999999999999 99999999999998433 35999999999
Q ss_pred ccCCCCCCCcceeeeeceeeCCC
Q 046265 617 KFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 617 ~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+............+||+.|+|||
T Consensus 168 ~~~~~~~~~~~~~~gt~~y~aPE 190 (342)
T 2qr7_A 168 KQLRAENGLLMTPCYTANFVAPE 190 (342)
T ss_dssp EECBCTTCCBCCSSCCSSCCCHH
T ss_pred ccCcCCCCceeccCCCccccCHH
Confidence 97755444445678999999998
No 144
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.95 E-value=7.4e-28 Score=240.28 Aligned_cols=168 Identities=21% Similarity=0.333 Sum_probs=145.4
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
.++|+..+.||+|+||.||+|+.+++..||||.+..... ..+.+.+|+.++.+++||||+++++++..++..++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC---cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 356788899999999999999988888999999975432 34568999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
|+++|+|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 84 YISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp CCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred ccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 999999999997643 2478899999999999999999998 99999999999999999999999999998765432
Q ss_pred C-CcceeeeeceeeCCC
Q 046265 624 S-NWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~-~~~~~~gt~~Y~APE 639 (639)
. ......||+.|+|||
T Consensus 159 ~~~~~~~~~~~~y~aPE 175 (268)
T 3sxs_A 159 YVSSVGTKFPVKWSAPE 175 (268)
T ss_dssp EEECCSCCCCGGGCCHH
T ss_pred hhcccCCCcCcccCCHH
Confidence 1 122345677899998
No 145
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.95 E-value=2.5e-28 Score=249.35 Aligned_cols=170 Identities=22% Similarity=0.393 Sum_probs=137.5
Q ss_pred hccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCc----
Q 046265 464 TNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQ---- 537 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~---- 537 (639)
.++|+..+.||+|+||.||+|+ ..+++.||||.+..... .......+.+|+.++++++||||+++++++...+.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 3568888999999999999996 46789999999986432 33445678999999999999999999999886654
Q ss_pred eeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 538 SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
.|+||||+++|+|.++++..+ .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred cEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 399999999999999997653 478899999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCCC---CcceeeeeceeeCCC
Q 046265 618 FLKPDSS---NWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~---~~~~~~gt~~Y~APE 639 (639)
.+..... .....+||+.|+|||
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE 189 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPE 189 (311)
T ss_dssp -----------------CCTTCCHH
T ss_pred cccccccccccccccCcCcccCCHH
Confidence 7643322 223467999999998
No 146
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.95 E-value=1.2e-27 Score=251.52 Aligned_cols=172 Identities=20% Similarity=0.289 Sum_probs=146.0
Q ss_pred hccCCCcceeccCCCceEEEEEc--------CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEc
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL--------PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFH 534 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~ 534 (639)
.++|...+.||+|+||.||+|+. ..++.||||++.... .....+.+.+|+++++++ +|||||+++++|..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc-CHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 35677889999999999999964 233679999997643 334457789999999999 89999999999999
Q ss_pred CCceeEEecccCCCChhHHhhcCCC-------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCee
Q 046265 535 PRQSFLLYEYLGRGSLAIILSNDAA-------------IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVL 601 (639)
Q Consensus 535 ~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil 601 (639)
++..|+||||+++|+|.+++..... ...+++..+..++.|++.||+|||.. +|+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 9999999999999999999976432 23589999999999999999999998 9999999999999
Q ss_pred eCCCCceEEccccccccCCCCC--CCcceeeeeceeeCCC
Q 046265 602 LGLDYDAHVSDFGISKFLKPDS--SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 602 l~~~~~~kl~DfGla~~~~~~~--~~~~~~~gt~~Y~APE 639 (639)
++.++.+||+|||+|+...... .......||+.|+|||
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE 263 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 263 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHH
Confidence 9999999999999998765432 1223456889999998
No 147
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=9.8e-28 Score=252.86 Aligned_cols=169 Identities=24% Similarity=0.395 Sum_probs=134.3
Q ss_pred HhccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc-cCceeeeEEEEEcCC--ce
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR-HRNVVKFYGFSFHPR--QS 538 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~--~~ 538 (639)
..++|+..+.||+|+||.||+|. ..+++.||||++..........+.+.+|+.++.++. |||||++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 45788899999999999999995 567899999999765545556677889999999997 999999999998654 68
Q ss_pred eEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccccccc
Q 046265 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKF 618 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~ 618 (639)
|+|||||+ |+|.+++... .+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+|+.
T Consensus 87 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 99999997 6898888753 477888999999999999999999 999999999999999999999999999986
Q ss_pred CCCC---------------------CCCcceeeeeceeeCCC
Q 046265 619 LKPD---------------------SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 619 ~~~~---------------------~~~~~~~~gt~~Y~APE 639 (639)
+... .......+||++|+|||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 200 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPE 200 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHH
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHH
Confidence 5321 11123468999999998
No 148
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2e-26 Score=247.85 Aligned_cols=243 Identities=20% Similarity=0.161 Sum_probs=109.3
Q ss_pred CEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCC
Q 046265 57 KHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIP 136 (639)
Q Consensus 57 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p 136 (639)
..++.+++.++ .+|..+. ++|++|+|++|++++..|..|.++++| ++|+|++|++++..|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L-----------------~~L~Ls~n~i~~~~~ 116 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHL-----------------EVLQLGRNSIRQIEV 116 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTC-----------------CEEECCSSCCCEECT
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCC-----------------CEEECCCCccCCcCh
Confidence 34444444444 3444333 345555555555554444444444322 245555555544444
Q ss_pred ccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEE
Q 046265 137 HFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIEL 216 (639)
Q Consensus 137 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L 216 (639)
..|.++++|++|+|++|++++..+..|..+++|++|++++|.++...+..|..+++|+.|++
T Consensus 117 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l------------------ 178 (452)
T 3zyi_A 117 GAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL------------------ 178 (452)
T ss_dssp TTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC------------------
T ss_pred hhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeC------------------
Confidence 44555555555555555554433344444555555555555544333333333333332222
Q ss_pred EcCCcccCCCCC-ccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCC
Q 046265 217 EIDNKQLFGQIP-KSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQ 295 (639)
Q Consensus 217 ~l~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~ 295 (639)
++|+..+.+| ..|.++++|++|++++|.+++.. .+..+++|+.|++++|.+ ++..|..+..+++
T Consensus 179 --~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~l-----------~~~~~~~~~~l~~ 243 (452)
T 3zyi_A 179 --GELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP--NLTPLVGLEELEMSGNHF-----------PEIRPGSFHGLSS 243 (452)
T ss_dssp --CCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCC--CCTTCTTCCEEECTTSCC-----------SEECGGGGTTCTT
T ss_pred --CCCCCccccChhhccCCCCCCEEECCCCcccccc--cccccccccEEECcCCcC-----------cccCcccccCccC
Confidence 2211111222 23444455555555555554331 234444455555333332 2333444444555
Q ss_pred CCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCC
Q 046265 296 LHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTN 352 (639)
Q Consensus 296 L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 352 (639)
|+.|++++|++.+..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|
T Consensus 244 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 300 (452)
T 3zyi_A 244 LKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 300 (452)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSS
T ss_pred CCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCC
Confidence 555555555554444444555555555555555554444444444555555555543
No 149
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.95 E-value=8.5e-28 Score=248.93 Aligned_cols=167 Identities=23% Similarity=0.381 Sum_probs=141.9
Q ss_pred ccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcccc--CceeeeEEEEEcCCceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRH--RNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~~~~~~~~~~~lv~ 542 (639)
+.|+..+.||+|+||.||+|..++++.||||++..........+.+.+|+.++.+++| |||+++++++..++..|+||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 4577889999999999999988889999999998765555566788999999999987 99999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
| +.+|+|.+++.... .+++..+..++.|++.||+|||.. +|+||||||+||+++ ++.+||+|||+++.+...
T Consensus 89 e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp C-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred e-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 9 56889999998653 477899999999999999999998 999999999999997 678999999999876543
Q ss_pred CC--CcceeeeeceeeCCC
Q 046265 623 SS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~--~~~~~~gt~~Y~APE 639 (639)
.. .....+||+.|+|||
T Consensus 161 ~~~~~~~~~~gt~~y~aPE 179 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPE 179 (343)
T ss_dssp ---------CCCCSSCCHH
T ss_pred cccccCCCCcCCcCcCCHH
Confidence 22 223568999999998
No 150
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.95 E-value=3.9e-28 Score=249.97 Aligned_cols=171 Identities=23% Similarity=0.370 Sum_probs=135.3
Q ss_pred HHhccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeE
Q 046265 462 RATNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 462 ~~~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 540 (639)
...++|+..+.||+|+||.||+|. ..+++.||||++..........+.+.+|+.++++++||||+++++++..++..|+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 345788899999999999999995 5578999999998655444445667899999999999999999999999999999
Q ss_pred EecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee-----CCCCceEEccccc
Q 046265 541 LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL-----GLDYDAHVSDFGI 615 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill-----~~~~~~kl~DfGl 615 (639)
||||++ |+|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||++ +.++.+||+|||+
T Consensus 111 v~e~~~-~~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EEECCS-EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EEecCC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999997 59999987654 378899999999999999999998 99999999999999 4555699999999
Q ss_pred cccCCCCCCCcceeeeeceeeCCC
Q 046265 616 SKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 616 a~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
|+............+||+.|+|||
T Consensus 184 a~~~~~~~~~~~~~~~t~~y~aPE 207 (329)
T 3gbz_A 184 ARAFGIPIRQFTHEIITLWYRPPE 207 (329)
T ss_dssp HHHHC-----------CCTTCCHH
T ss_pred ccccCCcccccCCCcCCccccCHH
Confidence 987654444445568899999998
No 151
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.95 E-value=5.5e-28 Score=252.54 Aligned_cols=171 Identities=22% Similarity=0.322 Sum_probs=143.0
Q ss_pred ccCCCcceeccCCCceEEEEEcC------CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCce
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP------SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS 538 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 538 (639)
++|+..+.||+|+||.||+|... +++.||||+++... .......+.+|+.++++++|||||++++++...+..
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc-ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 56778899999999999999743 45789999997533 344556788999999999999999999999999999
Q ss_pred eEEecccCCCChhHHhhcCCC----CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC---ceEEc
Q 046265 539 FLLYEYLGRGSLAIILSNDAA----IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY---DAHVS 611 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~---~~kl~ 611 (639)
|+||||+++|+|.+++..... ...+++..+..++.|+++||+|||.. +|+||||||+||+++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999975432 23588999999999999999999999 999999999999999555 59999
Q ss_pred cccccccCCCC--CCCcceeeeeceeeCCC
Q 046265 612 DFGISKFLKPD--SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 612 DfGla~~~~~~--~~~~~~~~gt~~Y~APE 639 (639)
|||+|+.+... ........||+.|||||
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE 256 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPE 256 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHH
T ss_pred CCccccccccccccccCCCcCCcccEECHH
Confidence 99999854221 12223456899999998
No 152
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.95 E-value=8.4e-28 Score=241.26 Aligned_cols=171 Identities=25% Similarity=0.407 Sum_probs=133.8
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
.++|+..+.||+|+||.||+|.. .+++.||||.+..... .....+.+.+|+.++++++||||+++++++...+..|+|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46788889999999999999965 6789999999864221 112246788999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||+++++|.+++.... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 99999999999997643 3578899999999999999999998 999999999999999999999999999987654
Q ss_pred CCCCcceeeeeceeeCCC
Q 046265 622 DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~~~~~~gt~~Y~APE 639 (639)
.........||+.|+|||
T Consensus 165 ~~~~~~~~~~~~~y~aPE 182 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPE 182 (278)
T ss_dssp ------------------
T ss_pred CCCcceeccCCCCcCCcc
Confidence 333334568999999998
No 153
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.95 E-value=5.2e-28 Score=271.45 Aligned_cols=171 Identities=20% Similarity=0.226 Sum_probs=146.6
Q ss_pred HhccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCcee
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSF 539 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~ 539 (639)
..++|+..++||+|+||+||+|+. .+++.||||++++... .....+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 356788899999999999999965 4678999999874311 112345677899999887 7999999999999999999
Q ss_pred EEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 540 LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 540 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
+||||+++|+|.++++..+ .+++..+..++.|++.||+|||.. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 419 lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 9999999999999998654 478899999999999999999999 9999999999999999999999999999975
Q ss_pred CCCCCCcceeeeeceeeCCC
Q 046265 620 KPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~~~~~~~gt~~Y~APE 639 (639)
..........+||+.|||||
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE 512 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPE 512 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHH
T ss_pred ccCCcccccccCCCcccCHh
Confidence 44444456689999999998
No 154
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.95 E-value=1.1e-27 Score=241.37 Aligned_cols=170 Identities=24% Similarity=0.291 Sum_probs=145.8
Q ss_pred HhccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCceeE
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 540 (639)
..++|+..+.||+|+||.||+|... +++.||||.+............+.+|+..+.++ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3567888999999999999999654 789999999987655555667788999999998 99999999999999999999
Q ss_pred EecccCCCChhHHhhcCCC-CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC--------------
Q 046265 541 LYEYLGRGSLAIILSNDAA-IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD-------------- 605 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~-------------- 605 (639)
||||+++|+|.+++..... ...+++..+..++.|++.||+|||.. +|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999975421 13578899999999999999999998 99999999999999844
Q ss_pred -----CceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 606 -----YDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 606 -----~~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
..+||+|||.+....... ...||+.|+|||
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE 200 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANE 200 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC----CCCCCGGGCCHH
T ss_pred ccCCceEEEEcccccccccCCcc----ccCCCccccChh
Confidence 479999999998765332 246999999998
No 155
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.95 E-value=8.2e-28 Score=249.43 Aligned_cols=166 Identities=25% Similarity=0.399 Sum_probs=129.0
Q ss_pred HhccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
..+.|+..+.||+|+||.||+|... +++.||||.+.... ..+.+.+|+.++++++||||++++++|..++..++|
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 3567888899999999999999665 57899999997532 245678999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC---CCceEEcccccccc
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL---DYDAHVSDFGISKF 618 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~---~~~~kl~DfGla~~ 618 (639)
|||+++|+|.+++...+ .+++..+..++.|+++|++|||.. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 127 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 127 LELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp ECCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 99999999999997643 478899999999999999999998 9999999999999975 88999999999987
Q ss_pred CCCCCCCcceeeeeceeeCCC
Q 046265 619 LKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 619 ~~~~~~~~~~~~gt~~Y~APE 639 (639)
.... ......+||+.|+|||
T Consensus 201 ~~~~-~~~~~~~gt~~y~aPE 220 (349)
T 2w4o_A 201 VEHQ-VLMKTVCGTPGYCAPE 220 (349)
T ss_dssp -------------CGGGSCHH
T ss_pred cCcc-cccccccCCCCccCHH
Confidence 6432 2234568999999998
No 156
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.95 E-value=9.1e-28 Score=241.67 Aligned_cols=168 Identities=23% Similarity=0.355 Sum_probs=142.4
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
.++|+..+.||+|+||.||+|+..++..||||++..... ..+.+.+|++++++++||||+++++++...+..|+|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 356778899999999999999998888999999985432 24668999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
|+++|+|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 100 YMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp CCTTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred ccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 999999999997633 2478899999999999999999998 99999999999999999999999999998764321
Q ss_pred -CCcceeeeeceeeCCC
Q 046265 624 -SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 -~~~~~~~gt~~Y~APE 639 (639)
.......||+.|+|||
T Consensus 175 ~~~~~~~~~~~~y~aPE 191 (283)
T 3gen_A 175 YTSSVGSKFPVRWSPPE 191 (283)
T ss_dssp HHSTTSTTSCGGGCCHH
T ss_pred cccccCCccCcccCCHH
Confidence 1122345788899998
No 157
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.95 E-value=1.2e-27 Score=251.95 Aligned_cols=167 Identities=23% Similarity=0.375 Sum_probs=142.7
Q ss_pred ccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc--cCceeeeEEEEEcCCceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR--HRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ 542 (639)
..|+..+.||+|+||.||+|...+++.||||++..........+.+.+|+.++++++ |||||++++++..++..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 457888999999999999998888999999999876555556678999999999997 599999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
| +.+++|.+++.... .+++..+..++.|++.||+|||.. +|+||||||+||+++ ++.+||+|||+++.+...
T Consensus 136 E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 207 (390)
T ss_dssp E-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred e-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence 9 56889999998654 467788999999999999999998 999999999999995 589999999999876543
Q ss_pred CC--CcceeeeeceeeCCC
Q 046265 623 SS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~--~~~~~~gt~~Y~APE 639 (639)
.. .....+||+.|||||
T Consensus 208 ~~~~~~~~~~gt~~y~aPE 226 (390)
T 2zmd_A 208 TTSVVKDSQVGAVNYMPPE 226 (390)
T ss_dssp ------CCSCCCGGGCCHH
T ss_pred CccccCCCCCcCCCccChH
Confidence 22 123568999999998
No 158
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.95 E-value=1.4e-27 Score=242.51 Aligned_cols=163 Identities=26% Similarity=0.405 Sum_probs=135.6
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhc--cccCceeeeEEEEEcC----Cc
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTE--LRHRNVVKFYGFSFHP----RQ 537 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~----~~ 537 (639)
.++|+..+.||+|+||.||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++... ..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 46788899999999999999987 5789999998642 23445566666655 7999999999997653 45
Q ss_pred eeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEeecCCCCCeeeCCCCceE
Q 046265 538 SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH--------HDYFPPIVHRDISSKNVLLGLDYDAH 609 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH--------~~~~~~iiHrdlk~~Nill~~~~~~k 609 (639)
.|+||||+++|+|.++++.. .+++..+..++.|+++|++||| .. +|+||||||+||+++.++.+|
T Consensus 81 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEE
T ss_pred eEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEE
Confidence 89999999999999999643 5888999999999999999999 55 999999999999999999999
Q ss_pred EccccccccCCCCCCC----cceeeeeceeeCCC
Q 046265 610 VSDFGISKFLKPDSSN----WSEFVGTFGYVAPI 639 (639)
Q Consensus 610 l~DfGla~~~~~~~~~----~~~~~gt~~Y~APE 639 (639)
|+|||+|+........ ....+||+.|+|||
T Consensus 154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE 187 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187 (301)
T ss_dssp ECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHH
T ss_pred EeeCCCeeecccccccccccccccccccceeChh
Confidence 9999999865433221 22348999999998
No 159
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.95 E-value=2.1e-27 Score=242.79 Aligned_cols=172 Identities=22% Similarity=0.310 Sum_probs=145.8
Q ss_pred hccCCCcceeccCCCceEEEEEc------CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCc
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQ 537 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 537 (639)
..+|...+.||+|+||.||+|.. .+++.||||.+.... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 45677788999999999999964 345789999997543 34455778999999999999999999999999999
Q ss_pred eeEEecccCCCChhHHhhcCCC---------------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCC
Q 046265 538 SFLLYEYLGRGSLAIILSNDAA---------------------IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDIS 596 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk 596 (639)
.++||||+++|+|.+++..... ...+++..+..++.|+++|++|||.. +|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence 9999999999999999976432 12478899999999999999999998 99999999
Q ss_pred CCCeeeCCCCceEEccccccccCCCCCC--CcceeeeeceeeCCC
Q 046265 597 SKNVLLGLDYDAHVSDFGISKFLKPDSS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 597 ~~Nill~~~~~~kl~DfGla~~~~~~~~--~~~~~~gt~~Y~APE 639 (639)
|+||+++.++.+||+|||+++....... ......||+.|+|||
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 222 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIE 222 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHH
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChh
Confidence 9999999999999999999987644322 123356788999998
No 160
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.95 E-value=5.8e-28 Score=244.67 Aligned_cols=169 Identities=25% Similarity=0.384 Sum_probs=139.1
Q ss_pred hccCCCcceeccCCCceEEEEEc-----CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcC--C
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-----PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP--R 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~ 536 (639)
.++|+..+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+.++++++||||+++++++... .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 35677889999999999999973 36789999999753 344456789999999999999999999998654 4
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccccc
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGIS 616 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla 616 (639)
..++||||+++|+|.+++..... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCGG--GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred ceEEEEEeCCCCCHHHHHHhccc--ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccc
Confidence 58999999999999999976532 478899999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCC---CcceeeeeceeeCCC
Q 046265 617 KFLKPDSS---NWSEFVGTFGYVAPI 639 (639)
Q Consensus 617 ~~~~~~~~---~~~~~~gt~~Y~APE 639 (639)
+....... ......|++.|+|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE 187 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPE 187 (295)
T ss_dssp C-------------CTTCGGGGCCHH
T ss_pred ccccCCcceeeeccCCCCccceeCcH
Confidence 87654322 122345778899998
No 161
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.95 E-value=1.8e-27 Score=240.83 Aligned_cols=170 Identities=22% Similarity=0.328 Sum_probs=147.9
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCC-CChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPH-PDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
..+|...+.||+|+||.||+|... +++.||+|.+.... ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 356778899999999999999654 57899999987543 2344567789999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||+++++|.+++.... .+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 94 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 99999999999887543 478899999999999999999998 999999999999999999999999999987654
Q ss_pred CCCCcceeeeeceeeCCC
Q 046265 622 DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~~~~~~gt~~Y~APE 639 (639)
.........||+.|+|||
T Consensus 168 ~~~~~~~~~~~~~y~aPE 185 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPE 185 (294)
T ss_dssp TTCCBCCCCSCCSSCCHH
T ss_pred CccccccccCCCCcCCcc
Confidence 444445568999999998
No 162
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.95 E-value=2.5e-27 Score=239.85 Aligned_cols=169 Identities=27% Similarity=0.337 Sum_probs=142.3
Q ss_pred cCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEecc
Q 046265 466 NFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544 (639)
Q Consensus 466 ~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 544 (639)
.|....+||+|+||.||+|. ..+++.||||.+.... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 34556699999999999996 4678899999997643 23456789999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC-CCceEEccccccccCCCCC
Q 046265 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL-DYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 545 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~-~~~~kl~DfGla~~~~~~~ 623 (639)
+++++|.+++.........++..+..++.|++.|++|||.. +|+||||||+||+++. ++.+||+|||+++......
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 99999999998654444567888999999999999999998 9999999999999987 8999999999998765433
Q ss_pred CCcceeeeeceeeCCC
Q 046265 624 SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~~~~~~~gt~~Y~APE 639 (639)
.......||+.|+|||
T Consensus 178 ~~~~~~~~~~~y~aPE 193 (295)
T 2clq_A 178 PCTETFTGTLQYMAPE 193 (295)
T ss_dssp ---CCCCCCGGGCCHH
T ss_pred CcccccCCCccccChh
Confidence 3334567999999998
No 163
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.95 E-value=1.8e-27 Score=245.71 Aligned_cols=170 Identities=22% Similarity=0.328 Sum_probs=148.5
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCC-CChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPH-PDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
..+|...+.||+|+||.||+|... +++.||+|.+.... ......+.+.+|+.++++++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467888899999999999999654 57899999987543 2334567789999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||+++++|.+++.... .+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp ECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 99999999999987543 478899999999999999999998 999999999999999999999999999987754
Q ss_pred CCCCcceeeeeceeeCCC
Q 046265 622 DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~~~~~~gt~~Y~APE 639 (639)
.........||+.|+|||
T Consensus 194 ~~~~~~~~~gt~~y~aPE 211 (335)
T 2owb_A 194 DGERKKVLCGTPNYIAPE 211 (335)
T ss_dssp TTCCBCCCCSCCSSCCHH
T ss_pred CcccccccCCCccccCHH
Confidence 444445578999999998
No 164
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.95 E-value=1.8e-27 Score=239.56 Aligned_cols=169 Identities=22% Similarity=0.368 Sum_probs=146.6
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.++|+..+.||+|+||.||+|.. .+++.||||.+..........+.+.+|+.++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 46788889999999999999964 56899999999765545555677889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc---eEEccccccccC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD---AHVSDFGISKFL 619 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~---~kl~DfGla~~~ 619 (639)
||+++|+|.+.+.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++. +||+|||++...
T Consensus 85 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp CCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred ecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 9999999988887653 478899999999999999999998 9999999999999986655 999999999876
Q ss_pred CCCCCCcceeeeeceeeCCC
Q 046265 620 KPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~~~~~~~gt~~Y~APE 639 (639)
... .......||+.|+|||
T Consensus 159 ~~~-~~~~~~~~~~~y~aPE 177 (284)
T 3kk8_A 159 NDS-EAWHGFAGTPGYLSPE 177 (284)
T ss_dssp CSS-CBCCCSCSCGGGCCHH
T ss_pred ccC-ccccCCCCCcCCcCch
Confidence 533 2334568999999998
No 165
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.95 E-value=8.7e-28 Score=253.81 Aligned_cols=170 Identities=21% Similarity=0.349 Sum_probs=145.0
Q ss_pred ccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC--ceeEE
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR--QSFLL 541 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv 541 (639)
++|...+.||+|+||.||+|+.. +++.||||.+..... ....+.+.+|++++++++||||+++++++...+ ..|+|
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 56778899999999999999654 589999999875321 223466789999999999999999999998765 67999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee----CCCCceEEccccccc
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL----GLDYDAHVSDFGISK 617 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill----~~~~~~kl~DfGla~ 617 (639)
|||+++|+|.+++........+++..+..++.|++.|++|||.. +|+||||||+||++ +.++.+||+|||+|+
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999998765444589999999999999999999999 99999999999999 777889999999998
Q ss_pred cCCCCCCCcceeeeeceeeCCC
Q 046265 618 FLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~~~~~~~gt~~Y~APE 639 (639)
...... .....+||+.|+|||
T Consensus 165 ~~~~~~-~~~~~~gt~~y~aPE 185 (396)
T 4eut_A 165 ELEDDE-QFVSLYGTEEYLHPD 185 (396)
T ss_dssp ECCCGG-GSSCSSSCCTTCCHH
T ss_pred EccCCC-ccccccCCccccCHH
Confidence 765432 233467999999998
No 166
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.95 E-value=1.5e-27 Score=245.67 Aligned_cols=165 Identities=20% Similarity=0.265 Sum_probs=141.9
Q ss_pred ccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.+|+..+.||+|+||.||+|. ..+++.||||.+..... .+.+.+|+.+++++ +||||+++++++...+..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 567888999999999999996 46789999999875432 23478899999999 8999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc-----eEEccccccc
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD-----AHVSDFGISK 617 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~-----~kl~DfGla~ 617 (639)
||+ +++|.+++.... ..+++..+..++.|++.||+|||.. +|+||||||+||+++.++. +||+|||+|+
T Consensus 85 e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 85 ELL-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp ECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred EeC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 999 999999997542 3588999999999999999999998 9999999999999998887 9999999998
Q ss_pred cCCCCCC-------CcceeeeeceeeCCC
Q 046265 618 FLKPDSS-------NWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~-------~~~~~~gt~~Y~APE 639 (639)
.+..... .....+||+.|+|||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 187 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSIN 187 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHH
T ss_pred eeecCCCCccccccccCCcCCCccccChH
Confidence 7643322 124578999999998
No 167
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.94 E-value=3.5e-27 Score=246.26 Aligned_cols=177 Identities=25% Similarity=0.387 Sum_probs=151.4
Q ss_pred hHHHHHHHhccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCC------hhhHHHHHHHHHHHhcc-ccCceee
Q 046265 456 LYEEVIRATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPD------MVVQQAFSNEIKALTEL-RHRNVVK 527 (639)
Q Consensus 456 ~~~~~~~~~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l-~H~niv~ 527 (639)
.+.......++|+..+.||+|+||.||+|... +|+.||||.+...... ....+.+.+|+.+++++ +||||++
T Consensus 85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 164 (365)
T 2y7j_A 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164 (365)
T ss_dssp HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 34444556678999999999999999999764 7899999998754321 12245678999999999 7999999
Q ss_pred eEEEEEcCCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc
Q 046265 528 FYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607 (639)
Q Consensus 528 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~ 607 (639)
+++++...+..|+||||+++|+|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.
T Consensus 165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 165 LIDSYESSSFMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEEEBSSEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEEEEeeCCEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 9999999999999999999999999997543 478899999999999999999998 9999999999999999999
Q ss_pred eEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 608 AHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 608 ~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+||+|||++..+.... .....+||+.|+|||
T Consensus 239 ikl~DfG~~~~~~~~~-~~~~~~gt~~y~aPE 269 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGE-KLRELCGTPGYLAPE 269 (365)
T ss_dssp EEECCCTTCEECCTTC-CBCCCCSCGGGCCHH
T ss_pred EEEEecCcccccCCCc-ccccCCCCCCccChh
Confidence 9999999998775432 334578999999998
No 168
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.94 E-value=1.3e-27 Score=247.71 Aligned_cols=166 Identities=27% Similarity=0.408 Sum_probs=142.8
Q ss_pred hccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
...|+..+.||+|+||.||+|+ ..+++.||||++..... .....+.+.+|+.++++++|||||+++++|..++..|+|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 3457788999999999999996 46789999999976432 233446789999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||++ |++.+++.... ..+++..+..++.|+++||+|||.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99997 67877775432 3578899999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCcceeeeeceeeCCC
Q 046265 622 DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~~~~~~gt~~Y~APE 639 (639)
. ...+||+.|+|||
T Consensus 207 ~----~~~~gt~~y~aPE 220 (348)
T 1u5q_A 207 A----NSFVGTPYWMAPE 220 (348)
T ss_dssp B----CCCCSCGGGCCHH
T ss_pred C----CcccCCcceeCHh
Confidence 2 3467999999998
No 169
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.94 E-value=1.9e-27 Score=237.44 Aligned_cols=165 Identities=16% Similarity=0.209 Sum_probs=145.1
Q ss_pred ccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcC--CceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP--RQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 542 (639)
++|+..+.||+|+||.||+|+.+ ++.||||.+..........+.+.+|+.++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56788899999999999999875 78899999987665566677899999999999999999999999887 7789999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeecCCCCCeeeCCCCceEEccccccccCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP--IVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--iiHrdlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
||+++|+|.+++..... ..+++..+..++.|+++|++|||.. + |+||||||+||+++.++.+|++|||++....
T Consensus 89 e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp ECCTTCBHHHHHHSCSS-CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred cccCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 99999999999986543 3578999999999999999999987 6 9999999999999999999999998876533
Q ss_pred CCCCCcceeeeeceeeCCC
Q 046265 621 PDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~~~~~~gt~~Y~APE 639 (639)
. ....||+.|+|||
T Consensus 165 ~-----~~~~~t~~y~aPE 178 (271)
T 3kmu_A 165 S-----PGRMYAPAWVAPE 178 (271)
T ss_dssp C-----TTCBSCGGGSCHH
T ss_pred c-----cCccCCccccChh
Confidence 2 2357899999998
No 170
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.94 E-value=2.4e-27 Score=243.18 Aligned_cols=169 Identities=21% Similarity=0.310 Sum_probs=146.5
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCCh----hhHHHHHHHHHHHhccccCceeeeEEEEEcCCce
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDM----VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS 538 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 538 (639)
.+.|+..+.||+|+||.||+|.. .+++.||||.+....... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 45688889999999999999965 468999999997643221 2357789999999999999999999999999999
Q ss_pred eEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC----ceEEcccc
Q 046265 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY----DAHVSDFG 614 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~----~~kl~DfG 614 (639)
|+||||+++++|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 99999999999999997643 478899999999999999999998 999999999999999887 79999999
Q ss_pred ccccCCCCCCCcceeeeeceeeCCC
Q 046265 615 ISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 615 la~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+++...... ......||+.|+|||
T Consensus 165 ~~~~~~~~~-~~~~~~gt~~y~aPE 188 (321)
T 2a2a_A 165 LAHEIEDGV-EFKNIFGTPEFVAPE 188 (321)
T ss_dssp TCEECCTTC-CCCCCCSCGGGCCHH
T ss_pred cceecCccc-cccccCCCCCccCcc
Confidence 998765432 234567999999998
No 171
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=7.1e-27 Score=235.43 Aligned_cols=255 Identities=22% Similarity=0.195 Sum_probs=185.5
Q ss_pred CCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCC
Q 046265 32 LKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPN 111 (639)
Q Consensus 32 L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~ 111 (639)
-++++.++++++ .+|..+ .++|++|++++|.+++..+..|..+++|++|++++|.+++..|..|.++++|
T Consensus 13 ~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L------- 82 (285)
T 1ozn_A 13 KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL------- 82 (285)
T ss_dssp SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC-------
T ss_pred CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCC-------
Confidence 368899999987 567654 4689999999999987666788999999999999999988778777777633
Q ss_pred CCcccCCCCccEEEccCCc-CcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCC
Q 046265 112 SLSNLTSLSLFHLDLSENQ-LSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNL 190 (639)
Q Consensus 112 ~~~~l~~L~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 190 (639)
++|++++|. ++...|..+..+++|++|++++|.+++..|..+..+++|++|++++|.+++..+..+..+
T Consensus 83 ----------~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 152 (285)
T 1ozn_A 83 ----------EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDL 152 (285)
T ss_dssp ----------CEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred ----------CEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccC
Confidence 588999997 776667888889999999999999988778888888899999998888876655445444
Q ss_pred CCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCc
Q 046265 191 SNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNN 270 (639)
Q Consensus 191 ~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 270 (639)
++|+.|++++|++.+..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.
T Consensus 153 --------------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 153 --------------------GNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp --------------------TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred --------------------CCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCc
Confidence 445556666677665555667788888888888888887777777778888888866665
Q ss_pred ccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCc
Q 046265 271 FYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVL 338 (639)
Q Consensus 271 l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 338 (639)
+ ++..+..+..+++|+.|++++|.+....+.. .-...++.+..+.+.+....|..+
T Consensus 213 l-----------~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 213 L-----------SALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp C-----------SCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGG
T ss_pred C-----------CcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHh
Confidence 5 2333445677778888888888776433211 111223334445555555555543
No 172
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.94 E-value=8.9e-28 Score=258.35 Aligned_cols=166 Identities=19% Similarity=0.288 Sum_probs=135.0
Q ss_pred hccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC------
Q 046265 464 TNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR------ 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------ 536 (639)
.++|+..+.||+|+||.||+|. ..+++.||||++..........+.+.+|+.+++.++|||||++++++...+
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 4678888999999999999995 557899999999865444455677889999999999999999999997653
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccccc
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGIS 616 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla 616 (639)
..|+||||++++ +.+.+.. .+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+|
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a 211 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 211 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred eEEEEEeCCCCC-HHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEee
Confidence 569999999765 5555542 377889999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCcceeeeeceeeCCC
Q 046265 617 KFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 617 ~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+..... ......+||++|+|||
T Consensus 212 ~~~~~~-~~~~~~~gt~~y~aPE 233 (464)
T 3ttj_A 212 RTAGTS-FMMTPYVVTRYYRAPE 233 (464)
T ss_dssp -----C-CCC----CCCTTCCHH
T ss_pred eecCCC-cccCCCcccccccCHH
Confidence 876532 2345578999999998
No 173
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.94 E-value=1.3e-27 Score=259.95 Aligned_cols=169 Identities=25% Similarity=0.359 Sum_probs=140.6
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.+.|+..+.||+|+||.||+|+. .+++.||||.+............+.+|+.++++++|||||+++++|.+.+..|+||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 45688889999999999999965 47889999999865443444667899999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC---CCceEEccccccccC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL---DYDAHVSDFGISKFL 619 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~---~~~~kl~DfGla~~~ 619 (639)
|||++|+|.+.+.... .+++..+..++.|++.|++|||.. +|+||||||+||+++. ++.+||+|||+|+..
T Consensus 116 e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 9999999998887553 477899999999999999999998 9999999999999975 455999999999876
Q ss_pred CCCCCCcceeeeeceeeCCC
Q 046265 620 KPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~~~~~~~gt~~Y~APE 639 (639)
... ......+||+.|+|||
T Consensus 190 ~~~-~~~~~~~gt~~y~aPE 208 (494)
T 3lij_A 190 ENQ-KKMKERLGTAYYIAPE 208 (494)
T ss_dssp BTT-BCBCCCCSCTTTCCHH
T ss_pred CCC-ccccccCCCcCeeCHH
Confidence 543 2334568999999998
No 174
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=3.6e-26 Score=245.05 Aligned_cols=244 Identities=22% Similarity=0.196 Sum_probs=118.1
Q ss_pred CCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccC
Q 046265 56 LKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSI 135 (639)
Q Consensus 56 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~ 135 (639)
.+.++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++| ++|+|++|++++..
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L-----------------~~L~Ls~n~i~~i~ 104 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHL-----------------EILQLSRNHIRTIE 104 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSC-----------------CEEECCSSCCCEEC
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCC-----------------CEEECCCCcCCccC
Confidence 344555555554 4554443 345555555555554444444444422 35555555555444
Q ss_pred CccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcE
Q 046265 136 PHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIE 215 (639)
Q Consensus 136 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~ 215 (639)
+..|.++++|++|+|++|++++..+..|..+++|++|++++|.++...+..|..+++|+.|+
T Consensus 105 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~------------------ 166 (440)
T 3zyj_A 105 IGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLD------------------ 166 (440)
T ss_dssp GGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEE------------------
T ss_pred hhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeC------------------
Confidence 45555555555555555555544334455555555555555555544433343333333322
Q ss_pred EEcCCcccCCCC-CccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCC
Q 046265 216 LEIDNKQLFGQI-PKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLY 294 (639)
Q Consensus 216 L~l~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~ 294 (639)
+++|+..+.+ +..|.++++|++|++++|.++... .+..+++|+.|+|++|.+ ++..|..+..++
T Consensus 167 --l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~l-----------~~~~~~~~~~l~ 231 (440)
T 3zyj_A 167 --LGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLIKLDELDLSGNHL-----------SAIRPGSFQGLM 231 (440)
T ss_dssp --CCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC--CCTTCSSCCEEECTTSCC-----------CEECTTTTTTCT
T ss_pred --CCCCCCcceeCcchhhcccccCeecCCCCcCcccc--ccCCCcccCEEECCCCcc-----------CccChhhhccCc
Confidence 2222111222 224445555555555555555322 244455555555443333 233344555555
Q ss_pred CCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCC
Q 046265 295 QLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTN 352 (639)
Q Consensus 295 ~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 352 (639)
+|+.|++++|++.+..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|
T Consensus 232 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 289 (440)
T 3zyj_A 232 HLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289 (440)
T ss_dssp TCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSS
T ss_pred cCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCC
Confidence 5555555555555555555555555555555555555444444555555555555554
No 175
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=2e-27 Score=246.27 Aligned_cols=172 Identities=23% Similarity=0.353 Sum_probs=143.2
Q ss_pred hccCCCcceeccCCCceEEEEEc------CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCC
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPR 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 536 (639)
.++|+..+.||+|+||.||+|.. .+++.||||.+.... .....+.+.+|+.+++++ +||||+++++++...+
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 46788889999999999999975 245689999997543 233456789999999999 8999999999999999
Q ss_pred ceeEEecccCCCChhHHhhcCCCC--------------------CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCC
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAI--------------------DEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDIS 596 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~--------------------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk 596 (639)
..|+||||+++|+|.+++...... ..+++..+..++.|++.||+|||.. +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 999999999999999999764321 2378999999999999999999998 99999999
Q ss_pred CCCeeeCCCCceEEccccccccCCCCCCC--cceeeeeceeeCCC
Q 046265 597 SKNVLLGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVAPI 639 (639)
Q Consensus 597 ~~Nill~~~~~~kl~DfGla~~~~~~~~~--~~~~~gt~~Y~APE 639 (639)
|+||+++.++.+||+|||+++........ .....||+.|+|||
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE 244 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPE 244 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHH
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHH
Confidence 99999999999999999999876433221 23457889999998
No 176
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.94 E-value=2.2e-27 Score=237.82 Aligned_cols=167 Identities=23% Similarity=0.341 Sum_probs=125.4
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
++|+..+.||+|+||.||+|.. .+++.||||.+..... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5788899999999999999964 5789999999976542 2334567889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+ ++++.+.+.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHTSS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred hhc-CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 999 678877776543 478899999999999999999999 9999999999999999999999999999876533
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
. .....+||+.|+|||
T Consensus 166 ~-~~~~~~~t~~y~aPE 181 (275)
T 2eue_A 166 N-FLKTSCGSPNYAAPE 181 (275)
T ss_dssp ----------CTTCCHH
T ss_pred c-cccCCCCCcCcCCce
Confidence 2 234567999999998
No 177
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=1.2e-27 Score=248.16 Aligned_cols=172 Identities=25% Similarity=0.356 Sum_probs=139.2
Q ss_pred HHhccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCC---hhhHHHHHHHHHHHhccccCceeeeEEEEEcCCc
Q 046265 462 RATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPD---MVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQ 537 (639)
Q Consensus 462 ~~~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 537 (639)
....+|+..+.||+|+||.||+|... +|+.||||++...... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578899999999999999999764 6899999999753321 1123467899999999999999999999999999
Q ss_pred eeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 538 SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
.++||||+++ ++.+++.... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eEEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 9999999986 8888886543 2467788899999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCCCcceeeeeceeeCCC
Q 046265 618 FLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~~~~~~~gt~~Y~APE 639 (639)
.+..........+||+.|+|||
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE 182 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPE 182 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHH
T ss_pred eccCCcccCCcccccccccCch
Confidence 8754444445578999999998
No 178
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.94 E-value=2.1e-27 Score=252.58 Aligned_cols=169 Identities=22% Similarity=0.297 Sum_probs=133.9
Q ss_pred HhccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCC------ChhhHHHHHHHHHHHhccccCceeeeEEEEEcC
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHP------DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP 535 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 535 (639)
..++|...+.||+|+||.||+|. ..+++.||||.+..... .......+.+|+.++++++|||||++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 45789999999999999999995 45689999999875321 11122347899999999999999999999864
Q ss_pred CceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC---CceEEcc
Q 046265 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD---YDAHVSD 612 (639)
Q Consensus 536 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~---~~~kl~D 612 (639)
+..|+||||+++|+|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.+ +.+||+|
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred CceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 55799999999999999887543 478899999999999999999998 99999999999999654 4599999
Q ss_pred ccccccCCCCCCCcceeeeeceeeCCC
Q 046265 613 FGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 613 fGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
||+|+..... ......+||+.|||||
T Consensus 286 FG~a~~~~~~-~~~~~~~gt~~y~aPE 311 (419)
T 3i6u_A 286 FGHSKILGET-SLMRTLCGTPTYLAPE 311 (419)
T ss_dssp SSTTTSCC------------CTTCCTT
T ss_pred cccceecCCC-ccccccCCCCCccCce
Confidence 9999876532 2334578999999999
No 179
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.94 E-value=3.1e-27 Score=240.92 Aligned_cols=171 Identities=25% Similarity=0.365 Sum_probs=140.3
Q ss_pred HhccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC---ChhhHHHHHHHHHHHhccc---cCceeeeEEEEEcC
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP---DMVVQQAFSNEIKALTELR---HRNVVKFYGFSFHP 535 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~ 535 (639)
..++|+..+.||+|+||.||+|.. .+++.||||.+..... .......+.+|+.++++++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 367899999999999999999975 5789999999874321 1122345677888877765 99999999999876
Q ss_pred C-----ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEE
Q 046265 536 R-----QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHV 610 (639)
Q Consensus 536 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl 610 (639)
. ..++||||++ |+|.+++..... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 5 4799999997 699999876543 3488999999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 611 SDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 611 ~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+|||+|+..... ......+||+.|+|||
T Consensus 162 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE 189 (308)
T 3g33_A 162 ADFGLARIYSYQ-MALTPVVVTLWYRAPE 189 (308)
T ss_dssp CSCSCTTTSTTC-CCSGGGGCCCSSCCHH
T ss_pred eeCccccccCCC-cccCCccccccccCch
Confidence 999999876533 2334578999999998
No 180
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=2.2e-28 Score=250.35 Aligned_cols=263 Identities=20% Similarity=0.181 Sum_probs=187.2
Q ss_pred EeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCc
Q 046265 12 VHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLS 91 (639)
Q Consensus 12 ~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 91 (639)
+++.+++...++..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..| +..+++|++|++++|+++
T Consensus 16 ~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~ 93 (317)
T 3o53_A 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ 93 (317)
T ss_dssp SCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEE
T ss_pred eccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccc
Confidence 455666655555556677789999999999987777788899999999999998885443 888889999999999887
Q ss_pred cccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccE
Q 046265 92 GWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLS 171 (639)
Q Consensus 92 ~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 171 (639)
+..+. + +|++|++++|++++..+. .+++|++|++++|++++..|..++.+++|++
T Consensus 94 ~l~~~-----~-----------------~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 148 (317)
T 3o53_A 94 ELLVG-----P-----------------SIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQY 148 (317)
T ss_dssp EEEEC-----T-----------------TCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEE
T ss_pred cccCC-----C-----------------CcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCE
Confidence 53321 2 235888888888865443 3577888888888888777778888888888
Q ss_pred EEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcc
Q 046265 172 LGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNI 251 (639)
Q Consensus 172 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 251 (639)
|++++|.+++..|..+. ..+++|+.|++++|.+.+. |. ...+++|+.|++++|.+++..
T Consensus 149 L~Ls~N~l~~~~~~~~~-------------------~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~ 207 (317)
T 3o53_A 149 LDLKLNEIDTVNFAELA-------------------ASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMG 207 (317)
T ss_dssp EECTTSCCCEEEGGGGG-------------------GGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEEC
T ss_pred EECCCCCCCcccHHHHh-------------------hccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcch
Confidence 88888888766554432 2344556666666666543 22 224777888888888887654
Q ss_pred hhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCccc-ccCCccccCCCCCCeeeccC-cc
Q 046265 252 YEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIV-GELPIELGNLKSLNYRALNG-NK 329 (639)
Q Consensus 252 ~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~-~~~p~~~~~l~~L~~L~l~~-N~ 329 (639)
+. +..+++|+.|++++|++. .+|..+..+++|+.|++++|.+. +.+|..+..++.|+.+++++ +.
T Consensus 208 ~~-~~~l~~L~~L~L~~N~l~------------~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~ 274 (317)
T 3o53_A 208 PE-FQSAAGVTWISLRNNKLV------------LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKK 274 (317)
T ss_dssp GG-GGGGTTCSEEECTTSCCC------------EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hh-hcccCcccEEECcCCccc------------chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchh
Confidence 43 677777888887666652 46666777777888888888777 66677777777777777773 33
Q ss_pred CcccCC
Q 046265 330 VYGSLP 335 (639)
Q Consensus 330 l~~~~p 335 (639)
+.|..|
T Consensus 275 l~~~~~ 280 (317)
T 3o53_A 275 LTGQNE 280 (317)
T ss_dssp HHSSSS
T ss_pred ccCCch
Confidence 444443
No 181
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.94 E-value=1.3e-27 Score=259.57 Aligned_cols=169 Identities=25% Similarity=0.386 Sum_probs=143.6
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.++|+..+.||+|+||.||+|.. .+++.||||++............+.+|+.++++++|||||++++++...+..|+||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 45688899999999999999965 47899999998643222234567899999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC---CCCceEEccccccccC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG---LDYDAHVSDFGISKFL 619 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~---~~~~~kl~DfGla~~~ 619 (639)
||+++|+|.+.+.... .+++..+..++.|++.|++|||.. +|+||||||+||+++ .++.+||+|||+|+..
T Consensus 101 e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp CCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 9999999999887653 478899999999999999999998 999999999999995 4567999999999876
Q ss_pred CCCCCCcceeeeeceeeCCC
Q 046265 620 KPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~~~~~~~gt~~Y~APE 639 (639)
... ......+||+.|+|||
T Consensus 175 ~~~-~~~~~~~gt~~y~aPE 193 (486)
T 3mwu_A 175 QQN-TKMKDRIGTAYYIAPE 193 (486)
T ss_dssp CCC-----CCTTGGGGCCGG
T ss_pred CCC-CccCCCcCCCCCCCHH
Confidence 543 2334568999999998
No 182
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=2.4e-27 Score=247.54 Aligned_cols=165 Identities=20% Similarity=0.331 Sum_probs=137.3
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC------
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR------ 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------ 536 (639)
.++|+..+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35678889999999999999965 67899999999765545555677899999999999999999999998763
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccccc
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGIS 616 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla 616 (639)
..|+||||+ +++|.+++... .+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+|
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 175 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 175 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecc
Confidence 459999999 88999998752 477889999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCCcceeeeeceeeCCC
Q 046265 617 KFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 617 ~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+..... ....+||++|+|||
T Consensus 176 ~~~~~~---~~~~~~t~~y~aPE 195 (367)
T 1cm8_A 176 RQADSE---MTGYVVTRWYRAPE 195 (367)
T ss_dssp EECCSS---CCSSCSCGGGCCTH
T ss_pred cccccc---cCcCcCCCCcCCHH
Confidence 876432 33468999999998
No 183
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.94 E-value=1.3e-27 Score=245.36 Aligned_cols=173 Identities=21% Similarity=0.303 Sum_probs=129.8
Q ss_pred hccCCCcceeccCCCceEEEEEcCCC----cEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCce-
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSW----EIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS- 538 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~- 538 (639)
.++|+..+.||+|+||.||+|..... ..||||.+..........+.+.+|++++++++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 46788899999999999999976543 2799999986544445567899999999999999999999999887655
Q ss_pred -----eEEecccCCCChhHHhhcCCC---CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEE
Q 046265 539 -----FLLYEYLGRGSLAIILSNDAA---IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHV 610 (639)
Q Consensus 539 -----~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl 610 (639)
++||||+++|+|.+++..... ...+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence 999999999999999864321 12588999999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCC--CcceeeeeceeeCCC
Q 046265 611 SDFGISKFLKPDSS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 611 ~DfGla~~~~~~~~--~~~~~~gt~~Y~APE 639 (639)
+|||+|+....... ......+++.|+|||
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE 209 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALE 209 (323)
T ss_dssp CCCCC-----------------CCGGGCCHH
T ss_pred eeccccccccccccccccccccCcccccCch
Confidence 99999987643321 122346788999998
No 184
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.94 E-value=3.1e-27 Score=245.59 Aligned_cols=169 Identities=27% Similarity=0.375 Sum_probs=142.4
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcC--------
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP-------- 535 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-------- 535 (639)
.+|+..+.||+|+||.||+|.. .+++.||||++............+.+|+.++++++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5688889999999999999965 6789999999976554444456788999999999999999999999873
Q ss_pred CceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 046265 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGI 615 (639)
Q Consensus 536 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGl 615 (639)
+..|+||||+++ ++.+.+.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 468999999975 7766665433 2478899999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCC----CCcceeeeeceeeCCC
Q 046265 616 SKFLKPDS----SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 616 a~~~~~~~----~~~~~~~gt~~Y~APE 639 (639)
|+.+.... ......+||+.|+|||
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE 198 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPE 198 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHH
T ss_pred cccccccccccccccCCcccccCccCch
Confidence 98764221 2234467999999998
No 185
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=4.6e-28 Score=266.07 Aligned_cols=159 Identities=18% Similarity=0.136 Sum_probs=125.6
Q ss_pred eeccCCCceEEEE-EcCCCcEEEEEEccCCCCC--------hhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCceeEE
Q 046265 472 CIGTAGQASVYKA-ELPSWEIVAVKKFHSPHPD--------MVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 472 ~ig~g~~g~vy~~-~~~~~~~vavK~~~~~~~~--------~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 541 (639)
..+.|+.|.++.+ +.-.|+.||||.+.+.... ....++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 3456666666665 3445789999999754211 12346799999999999 699999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||++||+|.+++...+. ++. .+|+.||+.||+|+|.+ +||||||||+|||++.++.+||+|||+|+....
T Consensus 321 MEyv~G~~L~d~i~~~~~---l~~---~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGEE---IDR---EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp EECCCSEEHHHHHHTTCC---CCH---HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred EecCCCCcHHHHHHhCCC---CCH---HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 999999999999987654 333 35899999999999999 999999999999999999999999999998766
Q ss_pred CCCCcceeeeeceeeCCC
Q 046265 622 DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~~~~~~gt~~Y~APE 639 (639)
......+.+||++|||||
T Consensus 392 ~~~~~~t~vGTp~YmAPE 409 (569)
T 4azs_A 392 DCSWPTNLVQSFFVFVNE 409 (569)
T ss_dssp --CCSHHHHHHHHHHHHH
T ss_pred CCccccCceechhhccHH
Confidence 555566789999999998
No 186
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.94 E-value=1.9e-27 Score=258.18 Aligned_cols=169 Identities=21% Similarity=0.369 Sum_probs=144.8
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
..+|+..+.||+|+||.||+|... +++.||||.+.... ...+.|.+|+.++++++|||||+++++|...+..|+||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 355777889999999999999765 47899999997543 23567899999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++|+|.+++..... ..+++..+..++.|+++||+|||.. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 296 E~~~~g~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp ECCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred EccCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 99999999999975432 3578899999999999999999998 9999999999999999999999999999876533
Q ss_pred CC-CcceeeeeceeeCCC
Q 046265 623 SS-NWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~-~~~~~~gt~~Y~APE 639 (639)
.. ......+++.|+|||
T Consensus 372 ~~~~~~~~~~~~~y~aPE 389 (495)
T 1opk_A 372 TYTAHAGAKFPIKWTAPE 389 (495)
T ss_dssp CEECCTTCCCCGGGCCHH
T ss_pred ceeecCCCcCCcceeCHh
Confidence 21 122345678999998
No 187
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.94 E-value=3.9e-27 Score=243.05 Aligned_cols=172 Identities=17% Similarity=0.295 Sum_probs=144.1
Q ss_pred hccCCCcceeccCCCceEEEEEc--------CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEc
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL--------PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFH 534 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~ 534 (639)
.++|...+.||+|+||.||+|+. .+++.||||.+.... .....+.+.+|+.+++++ +||||+++++++..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 35677889999999999999975 346789999997543 334456789999999999 89999999999999
Q ss_pred CCceeEEecccCCCChhHHhhcCCC-------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCee
Q 046265 535 PRQSFLLYEYLGRGSLAIILSNDAA-------------IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVL 601 (639)
Q Consensus 535 ~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil 601 (639)
.+..|+||||+++|+|.+++..... ...+++..+..++.|+++|++|||.. +|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence 9999999999999999999986542 12488999999999999999999998 9999999999999
Q ss_pred eCCCCceEEccccccccCCCCCC--CcceeeeeceeeCCC
Q 046265 602 LGLDYDAHVSDFGISKFLKPDSS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 602 l~~~~~~kl~DfGla~~~~~~~~--~~~~~~gt~~Y~APE 639 (639)
++.++.+||+|||+++....... ......||+.|+|||
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 229 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 229 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHH
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChH
Confidence 99999999999999987654321 123346788999998
No 188
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=1.3e-28 Score=251.44 Aligned_cols=250 Identities=19% Similarity=0.191 Sum_probs=160.5
Q ss_pred cCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCC-CCCCcccC-------CCCCCCEEeeecccCccccCccc
Q 046265 27 GNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLR-GSVPREVG-------QLSSLKQLVLYCNGLSGWLPSSF 98 (639)
Q Consensus 27 ~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~-~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~ 98 (639)
+..++|++|++++|.+ .+|..+... |+.|+|++|+++ +.+|..+. ++++|++|+|++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3445566666666666 455544433 666666666662 34555444 56666666666666665555544
Q ss_pred --cCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCC-----CCCCEEeccCCCCCCCCCccccCCCcccE
Q 046265 99 --GNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHL-----SNLAVLHLGDNSLFGSIPPILGKVQSLLS 171 (639)
Q Consensus 99 --~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 171 (639)
..+++| ++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+.+++|++
T Consensus 116 ~~~~l~~L-----------------~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 177 (312)
T 1wwl_A 116 LEATGPDL-----------------NILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALST 177 (312)
T ss_dssp SSCCSCCC-----------------SEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCE
T ss_pred HHhcCCCc-----------------cEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCE
Confidence 344322 3666666666644 5555554 56666666666666555566666666666
Q ss_pred EEcccCcCCccC--CccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCC--CCC-ccccCCCCCceecccccc
Q 046265 172 LGFDLNLLNGVL--PPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFG--QIP-KSLRNFTSLNIVHLEQNH 246 (639)
Q Consensus 172 L~l~~N~l~~~~--p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~--~~p-~~~~~l~~L~~L~L~~N~ 246 (639)
|++++|.+.+.+ |..+ .+..+++|++|++++|++.+ .++ ..+.++++|+.|++++|.
T Consensus 178 L~Ls~N~l~~~~~~~~~~------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~ 239 (312)
T 1wwl_A 178 LDLSDNPELGERGLISAL------------------CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNS 239 (312)
T ss_dssp EECCSCTTCHHHHHHHHS------------------CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSC
T ss_pred EECCCCCcCcchHHHHHH------------------HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCc
Confidence 666666655431 1111 12556677777777777763 222 334577888889999888
Q ss_pred ccCcch-hhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeec
Q 046265 247 LTGNIY-EVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRAL 325 (639)
Q Consensus 247 l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l 325 (639)
+++..| ..+..+++|++|++++|++ + .+|..+. ++|+.||+++|++++. |. +..+++|+.|++
T Consensus 240 l~~~~~~~~~~~l~~L~~L~Ls~N~l-----------~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L 303 (312)
T 1wwl_A 240 LRDAAGAPSCDWPSQLNSLNLSFTGL-----------K-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSL 303 (312)
T ss_dssp CCSSCCCSCCCCCTTCCEEECTTSCC-----------S-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEEC
T ss_pred CCcccchhhhhhcCCCCEEECCCCcc-----------C-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEec
Confidence 888664 4456678899999777766 2 5676666 7899999999999866 65 888999999999
Q ss_pred cCccCcc
Q 046265 326 NGNKVYG 332 (639)
Q Consensus 326 ~~N~l~~ 332 (639)
++|.+++
T Consensus 304 ~~N~l~~ 310 (312)
T 1wwl_A 304 KGNPFLD 310 (312)
T ss_dssp TTCTTTC
T ss_pred cCCCCCC
Confidence 9998874
No 189
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.94 E-value=2.3e-27 Score=241.12 Aligned_cols=169 Identities=22% Similarity=0.321 Sum_probs=141.0
Q ss_pred ccCCCcceeccCCCceEEEEE-----cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcC--Cc
Q 046265 465 NNFDAKYCIGTAGQASVYKAE-----LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP--RQ 537 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~ 537 (639)
..|+..+.||+|+||.||+|+ ..+++.||||++.... .....+.+.+|+.++++++||||+++++++... ..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 446778899999999999997 3467899999997543 223456789999999999999999999999877 56
Q ss_pred eeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 538 SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
.++||||+++|+|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 899999999999999996543 2478899999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCCC---CcceeeeeceeeCCC
Q 046265 618 FLKPDSS---NWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~---~~~~~~gt~~Y~APE 639 (639)
....... ......||..|+|||
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE 199 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPE 199 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHH
T ss_pred cccCCCcceeccCCCCCCccccCCe
Confidence 7754432 123456888999998
No 190
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.94 E-value=2.5e-27 Score=237.70 Aligned_cols=167 Identities=24% Similarity=0.317 Sum_probs=145.1
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.++|+..+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 85 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence 467888999999999999999654 568899999875432 23567899999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee---CCCCceEEccccccccC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKFL 619 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill---~~~~~~kl~DfGla~~~ 619 (639)
||+++++|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||++ +.++.+||+|||++..+
T Consensus 86 e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 86 ELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp ECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred eccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 9999999999887643 478899999999999999999998 99999999999999 78899999999999876
Q ss_pred CCCCCCcceeeeeceeeCCC
Q 046265 620 KPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~~~~~~~gt~~Y~APE 639 (639)
.... ......||+.|+|||
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE 178 (277)
T 3f3z_A 160 KPGK-MMRTKVGTPYYVSPQ 178 (277)
T ss_dssp CTTS-CBCCCCSCTTTCCHH
T ss_pred cCcc-chhccCCCCCccChH
Confidence 5432 234567999999998
No 191
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.94 E-value=2.9e-27 Score=241.52 Aligned_cols=171 Identities=22% Similarity=0.315 Sum_probs=146.1
Q ss_pred ccCCCcceeccCCCceEEEEEc------CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCc
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQ 537 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~ 537 (639)
++|+..+.||+|+||.||+|.. .+++.||||.+.... .....+.+.+|+.+++++ +||||+++++++..++.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 5677889999999999999964 356889999997543 334567789999999999 89999999999999999
Q ss_pred eeEEecccCCCChhHHhhcCCC---------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee
Q 046265 538 SFLLYEYLGRGSLAIILSNDAA---------------IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL 602 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~---------------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill 602 (639)
.++||||+++|+|.+++..... ...+++..+..++.|+++|++|||.. +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 9999999999999999976432 12488999999999999999999998 99999999999999
Q ss_pred CCCCceEEccccccccCCCCCCC--cceeeeeceeeCCC
Q 046265 603 GLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVAPI 639 (639)
Q Consensus 603 ~~~~~~kl~DfGla~~~~~~~~~--~~~~~gt~~Y~APE 639 (639)
+.++.+||+|||+++........ .....||+.|+|||
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 217 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE 217 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHH
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChH
Confidence 99999999999999877543321 23356888999998
No 192
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.94 E-value=6.6e-28 Score=242.08 Aligned_cols=173 Identities=24% Similarity=0.420 Sum_probs=145.8
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEc--CCceeE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH--PRQSFL 540 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~l 540 (639)
.++|+..+.||+|+||.||+|.. .+++.||||.+..........+.+.+|+.++++++||||+++++++.. .+..|+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 46788889999999999999965 478999999998765555667789999999999999999999998854 567899
Q ss_pred EecccCCCChhHHhhcCCC-CCCcCHHHHHHHHHHHHHHHHHHHhCCCCC-----eEeecCCCCCeeeCCCCceEEcccc
Q 046265 541 LYEYLGRGSLAIILSNDAA-IDEFSWTVRMNVIKSVANTLSYMHHDYFPP-----IVHRDISSKNVLLGLDYDAHVSDFG 614 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-----iiHrdlk~~Nill~~~~~~kl~DfG 614 (639)
||||+++|+|.+++..... ...+++..+..++.|++.|++|||.. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999975332 23488999999999999999999998 6 9999999999999999999999999
Q ss_pred ccccCCCCCCCcceeeeeceeeCCC
Q 046265 615 ISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 615 la~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+++.............||+.|+|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE 186 (279)
T 2w5a_A 162 LARILNHDTSFAKTFVGTPYYMSPE 186 (279)
T ss_dssp HHHHC---CHHHHHHHSCCTTCCHH
T ss_pred hheeeccccccccccCCCccccChH
Confidence 9987654332233467999999998
No 193
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=5.6e-26 Score=251.15 Aligned_cols=263 Identities=25% Similarity=0.240 Sum_probs=147.6
Q ss_pred eeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEee
Q 046265 6 FFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVL 85 (639)
Q Consensus 6 ~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 85 (639)
-....+++++|++. .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 34566777777776 6676665 67888888888877 4555 5677888888888877 4665 5677888888
Q ss_pred ecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccC
Q 046265 86 YCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGK 165 (639)
Q Consensus 86 ~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 165 (639)
++|++++ +|. .++ + |++|++++|++++ +|.. +++|++|+|++|++++ +|. .
T Consensus 109 s~N~l~~-l~~---~l~---------------~--L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~ 159 (622)
T 3g06_A 109 FSNPLTH-LPA---LPS---------------G--LCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---L 159 (622)
T ss_dssp CSCCCCC-CCC---CCT---------------T--CCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---C
T ss_pred cCCcCCC-CCC---CCC---------------C--cCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---c
Confidence 8887774 333 112 2 2477888888773 5553 4778888888887774 443 2
Q ss_pred CCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccc
Q 046265 166 VQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQN 245 (639)
Q Consensus 166 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N 245 (639)
+.+|+.|++++|.+++ +| ..+++|+.|+++.|.+...-..+++|+.|++++|.+.. +|.. +++|+.|++++|
T Consensus 160 ~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N 231 (622)
T 3g06_A 160 PSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGN 231 (622)
T ss_dssp CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSS
T ss_pred cCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCCccchhhEEECcCCcccc-cCCC---CCCCCEEEccCC
Confidence 4567778888887774 33 23455555555544433211223444555555554432 2321 244444455555
Q ss_pred cccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeec
Q 046265 246 HLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRAL 325 (639)
Q Consensus 246 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l 325 (639)
.+++.. ..+++|+.|++++|++. .+|. .+++|+.|+|++|+++ .+|..+..+++|+.|++
T Consensus 232 ~L~~lp----~~l~~L~~L~Ls~N~L~------------~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 232 RLTSLP----VLPSELKELMVSGNRLT------------SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp CCSCCC----CCCTTCCEEECCSSCCS------------CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred ccCcCC----CCCCcCcEEECCCCCCC------------cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 444422 23344444444444331 2332 2334444444444444 33444444444444444
Q ss_pred cCccCcccCCc
Q 046265 326 NGNKVYGSLPR 336 (639)
Q Consensus 326 ~~N~l~~~~p~ 336 (639)
++|.+++..|.
T Consensus 292 ~~N~l~~~~~~ 302 (622)
T 3g06_A 292 EGNPLSERTLQ 302 (622)
T ss_dssp CSCCCCHHHHH
T ss_pred cCCCCCCcCHH
Confidence 44444444443
No 194
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.94 E-value=2.3e-27 Score=241.69 Aligned_cols=165 Identities=24% Similarity=0.385 Sum_probs=134.5
Q ss_pred ccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEecc
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 544 (639)
++|+..+.||+|+||.||+|... ++.||||++... ...+.|.+|+.++++++||||+++++++. +..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 46777889999999999999875 688999998642 24567899999999999999999999887 358999999
Q ss_pred cCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc-eEEccccccccCCCCC
Q 046265 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD-AHVSDFGISKFLKPDS 623 (639)
Q Consensus 545 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~-~kl~DfGla~~~~~~~ 623 (639)
+++|+|.+++........+++..+..++.|+++|++|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~- 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH- 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence 999999999987665556788999999999999999999943238999999999999998886 799999999865432
Q ss_pred CCcceeeeeceeeCCC
Q 046265 624 SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~~~~~~~gt~~Y~APE 639 (639)
.....||+.|+|||
T Consensus 160 --~~~~~gt~~y~aPE 173 (307)
T 2eva_A 160 --MTNNKGSAAWMAPE 173 (307)
T ss_dssp -------CCTTSSCHH
T ss_pred --cccCCCCCceEChh
Confidence 23357999999998
No 195
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.94 E-value=1.9e-27 Score=239.70 Aligned_cols=171 Identities=23% Similarity=0.330 Sum_probs=140.3
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.+.|...+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 35678889999999999999965 5688999999875432 223567899999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCC-CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee---CCCCceEEcccccccc
Q 046265 543 EYLGRGSLAIILSNDA-AIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKF 618 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill---~~~~~~kl~DfGla~~ 618 (639)
||+++|+|.+.+.... ....+++..+..++.|+++|++|||.. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 9999999999885431 123578899999999999999999998 99999999999999 4568899999999987
Q ss_pred CCCCCCCcceeeeeceeeCCC
Q 046265 619 LKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 619 ~~~~~~~~~~~~gt~~Y~APE 639 (639)
..... ......||+.|+|||
T Consensus 177 ~~~~~-~~~~~~~t~~y~aPE 196 (285)
T 3is5_A 177 FKSDE-HSTNAAGTALYMAPE 196 (285)
T ss_dssp -----------CTTGGGCCHH
T ss_pred cCCcc-cCcCcccccCcCChH
Confidence 65432 234567999999998
No 196
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.94 E-value=1.3e-27 Score=257.09 Aligned_cols=168 Identities=18% Similarity=0.358 Sum_probs=143.1
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
.++|+..+.||+|+||.||+|...+++.||||+++... ...+.|.+|+.++++++|||||++++++. .+..|+|||
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 45677889999999999999998888999999997533 23567999999999999999999999986 567899999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
|+++|+|.++++.... ..+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+++......
T Consensus 263 ~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp CCTTCBHHHHHHSHHH-HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred ecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 9999999999975432 2467889999999999999999998 99999999999999999999999999998764321
Q ss_pred -CCcceeeeeceeeCCC
Q 046265 624 -SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 -~~~~~~~gt~~Y~APE 639 (639)
.......+++.|+|||
T Consensus 339 ~~~~~~~~~~~~y~aPE 355 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAPE 355 (454)
T ss_dssp HHTTCSSSSCGGGSCHH
T ss_pred eeccCCCcccccccCHH
Confidence 1112345678999998
No 197
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.94 E-value=7.9e-28 Score=247.10 Aligned_cols=168 Identities=21% Similarity=0.336 Sum_probs=134.3
Q ss_pred ccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
++|...+.||+|+||.||+|... +++.||||++...... .....+.+|+.++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 46778899999999999999654 7899999998754321 112234579999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
|++ |++.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 81 YLD-KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CCS-EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred ccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 997 58888887543 2578899999999999999999998 99999999999999999999999999998765444
Q ss_pred CCcceeeeeceeeCCC
Q 046265 624 SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~~~~~~~gt~~Y~APE 639 (639)
......+||+.|+|||
T Consensus 155 ~~~~~~~~t~~y~aPE 170 (324)
T 3mtl_A 155 KTYDNEVVTLWYRPPD 170 (324)
T ss_dssp --------CGGGCCHH
T ss_pred cccccccCcccccChh
Confidence 4445568999999998
No 198
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.94 E-value=3.6e-27 Score=257.10 Aligned_cols=169 Identities=25% Similarity=0.401 Sum_probs=142.7
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCCh-----------hhHHHHHHHHHHHhccccCceeeeEEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDM-----------VVQQAFSNEIKALTELRHRNVVKFYGF 531 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~H~niv~l~~~ 531 (639)
.++|...+.||+|+||.||+|.. .+++.||||.+....... ...+.+.+|+.++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 46788899999999999999965 467899999997643221 235678999999999999999999999
Q ss_pred EEcCCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC---ce
Q 046265 532 SFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY---DA 608 (639)
Q Consensus 532 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~---~~ 608 (639)
|.+.+..|+|||||++|+|.+.+.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++ .+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccE
Confidence 999999999999999999999887643 478899999999999999999998 999999999999998775 69
Q ss_pred EEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 609 HVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 609 kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
||+|||+|+..... ......+||+.|+|||
T Consensus 189 kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE 218 (504)
T 3q5i_A 189 KIVDFGLSSFFSKD-YKLRDRLGTAYYIAPE 218 (504)
T ss_dssp EECCCTTCEECCTT-SCBCCCCSCTTTCCHH
T ss_pred EEEECCCCEEcCCC-CccccccCCcCCCCHH
Confidence 99999999877543 2334568999999998
No 199
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.94 E-value=5.2e-27 Score=237.01 Aligned_cols=165 Identities=22% Similarity=0.323 Sum_probs=141.7
Q ss_pred CCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEc----CCceeEE
Q 046265 467 FDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH----PRQSFLL 541 (639)
Q Consensus 467 f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv 541 (639)
|...+.||+|+||.||+|.. .++..||+|.+..........+.+.+|+.++++++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 55667899999999999954 567899999998655555667789999999999999999999999875 3458999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeecCCCCCeeeC-CCCceEEcccccccc
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP--IVHRDISSKNVLLG-LDYDAHVSDFGISKF 618 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--iiHrdlk~~Nill~-~~~~~kl~DfGla~~ 618 (639)
|||+++|+|.+++.... .+++..+..++.+++.|++|||.. + |+||||||+||+++ .++.+||+|||++..
T Consensus 108 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 99999999999997643 477899999999999999999998 6 99999999999997 789999999999976
Q ss_pred CCCCCCCcceeeeeceeeCCC
Q 046265 619 LKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 619 ~~~~~~~~~~~~gt~~Y~APE 639 (639)
... .......||+.|+|||
T Consensus 182 ~~~--~~~~~~~~t~~y~aPE 200 (290)
T 1t4h_A 182 KRA--SFAKAVIGTPEFMAPE 200 (290)
T ss_dssp CCT--TSBEESCSSCCCCCGG
T ss_pred ccc--cccccccCCcCcCCHH
Confidence 543 2334567999999998
No 200
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.94 E-value=2.4e-27 Score=240.58 Aligned_cols=170 Identities=25% Similarity=0.381 Sum_probs=142.3
Q ss_pred ccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
++|+..+.||+|+||.||+|... +++.||||++..........+.+.+|+.++++++||||+++++++..++..|+|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 46788899999999999999654 78999999997654333345678899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
|++ |+|.+++..... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~-~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp CCS-EEHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred ccc-CCHHHHHHhhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 997 699999875432 3478899999999999999999998 99999999999999999999999999998765433
Q ss_pred CCcceeeeeceeeCCC
Q 046265 624 SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~~~~~~~gt~~Y~APE 639 (639)
.......||+.|+|||
T Consensus 158 ~~~~~~~~~~~y~aPE 173 (299)
T 2r3i_A 158 RTYTHEVVTLWYRAPE 173 (299)
T ss_dssp BCTTSCBCCCTTCCHH
T ss_pred cccCcccccccccCcH
Confidence 3334567899999998
No 201
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.94 E-value=8.5e-27 Score=235.04 Aligned_cols=165 Identities=30% Similarity=0.512 Sum_probs=139.6
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhH-----HHHHHHHHHHhccccCceeeeEEEEEcCCce
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQ-----QAFSNEIKALTELRHRNVVKFYGFSFHPRQS 538 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~-----~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 538 (639)
++|+..+.||+|+||.||+|.. .+++.||||.+.......... +.+.+|+.++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5677788999999999999965 578999999997644322111 67899999999999999999999987654
Q ss_pred eEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeecCCCCCeeeCCCCc-----eEEc
Q 046265 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP--IVHRDISSKNVLLGLDYD-----AHVS 611 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--iiHrdlk~~Nill~~~~~-----~kl~ 611 (639)
++||||+++|+|.+.+.... ..+++..+..++.|++.|++|||.. + |+||||||+||+++.++. +||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 79999999999998886543 3588999999999999999999998 7 999999999999988776 9999
Q ss_pred cccccccCCCCCCCcceeeeeceeeCCC
Q 046265 612 DFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 612 DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
|||+++.... ......||+.|+|||
T Consensus 172 Dfg~~~~~~~---~~~~~~g~~~y~aPE 196 (287)
T 4f0f_A 172 DFGLSQQSVH---SVSGLLGNFQWMAPE 196 (287)
T ss_dssp CCTTCBCCSS---CEECCCCCCTTSCGG
T ss_pred CCCccccccc---cccccCCCccccCch
Confidence 9999985432 234567999999998
No 202
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.94 E-value=3.1e-27 Score=237.58 Aligned_cols=169 Identities=21% Similarity=0.324 Sum_probs=131.8
Q ss_pred hccCCCcceeccCCCceEEEEEcCC----CcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCcee
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPS----WEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSF 539 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 539 (639)
.++|+..+.||+|+||.||+|.... +..||||.+.... .....+.+.+|+.++++++||||+++++++. ++..|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 3567788999999999999996542 4579999987543 3445677899999999999999999999984 56789
Q ss_pred EEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 540 LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 540 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
+||||+++|+|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 92 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccccc
Confidence 9999999999999997543 2478899999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCC-CcceeeeeceeeCCC
Q 046265 620 KPDSS-NWSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~-~~~~~~gt~~Y~APE 639 (639)
..... ......+|+.|+|||
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE 187 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPE 187 (281)
T ss_dssp ------------CCGGGCCHH
T ss_pred CcccccccccCCCcccccChh
Confidence 53322 223356788999998
No 203
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.94 E-value=2.4e-27 Score=257.45 Aligned_cols=169 Identities=25% Similarity=0.395 Sum_probs=147.0
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
.++|+..+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.++++++|||||++++++.+.+..|+|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 45688889999999999999965 4789999999976542 233467789999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee---CCCCceEEcccccccc
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKF 618 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill---~~~~~~kl~DfGla~~ 618 (639)
|||+++|+|.+.+.... .+++..+..++.|++.|++|||.. +|+||||||+||++ +.++.+||+|||+|+.
T Consensus 105 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp ECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 99999999999987654 478899999999999999999999 99999999999999 4678999999999987
Q ss_pred CCCCCCCcceeeeeceeeCCC
Q 046265 619 LKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 619 ~~~~~~~~~~~~gt~~Y~APE 639 (639)
+... ......+||+.|+|||
T Consensus 179 ~~~~-~~~~~~~gt~~y~aPE 198 (484)
T 3nyv_A 179 FEAS-KKMKDKIGTAYYIAPE 198 (484)
T ss_dssp BCCC-CSHHHHTTGGGTCCHH
T ss_pred cccc-cccccCCCCccccCce
Confidence 7543 2334568999999998
No 204
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.94 E-value=3.9e-27 Score=252.83 Aligned_cols=164 Identities=26% Similarity=0.382 Sum_probs=139.9
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC-ceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR-QSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-~~~lv~ 542 (639)
.++|+..+.||+|+||.||+|... ++.||||.++... ..+.|.+|+.++++++|||||++++++...+ ..|+||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 456777889999999999999876 6799999997543 3467899999999999999999999988765 789999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++|+|.+++...+. ..+++..+..++.|+++||+|||.. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 267 e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp ECCTTCBHHHHHHHHCT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 99999999999986432 3468899999999999999999998 9999999999999999999999999999865422
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
. ....+++.|+|||
T Consensus 343 ~---~~~~~~~~y~aPE 356 (450)
T 1k9a_A 343 Q---DTGKLPVKWTAPE 356 (450)
T ss_dssp -------CCCTTTSCHH
T ss_pred c---cCCCCCcceeCHH
Confidence 1 2346788999998
No 205
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=2.3e-28 Score=249.59 Aligned_cols=248 Identities=19% Similarity=0.225 Sum_probs=199.8
Q ss_pred CCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCc-cccCcccc-------CCCCCCcccCCCCCcccCCCCc
Q 046265 50 IDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLS-GWLPSSFG-------NLNNLAIGSMPNSLSNLTSLSL 121 (639)
Q Consensus 50 ~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~-------~l~~L~~~~lp~~~~~l~~L~L 121 (639)
++.+++|+.|++++|.+ .+|..+... |+.|+|++|+++ +.+|..+. +++ +|
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~---------------~L-- 97 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGIS---------------GL-- 97 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTS---------------CC--
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcC---------------Cc--
Confidence 56778899999999999 688877654 999999999994 45665554 444 33
Q ss_pred cEEEccCCcCcccCCccc--cCCCCCCEEeccCCCCCCCCCccccCC-----CcccEEEcccCcCCccCCccCcCCCCCC
Q 046265 122 FHLDLSENQLSGSIPHFL--GHLSNLAVLHLGDNSLFGSIPPILGKV-----QSLLSLGFDLNLLNGVLPPSISNLSNLE 194 (639)
Q Consensus 122 ~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 194 (639)
++|+|++|++++.+|..+ ..+++|++|+|++|++++. |..++.+ ++|++|++++|.+++..|..|..+++|
T Consensus 98 ~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L- 175 (312)
T 1wwl_A 98 QELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPAL- 175 (312)
T ss_dssp CEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSC-
T ss_pred cEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCC-
Confidence 699999999999899876 8999999999999999987 8888877 899999999999998877777665554
Q ss_pred eEEccCCccccccccccCCcEEEcCCcccCCC--CCccc--cCCCCCceeccccccccCc---chhhhhcCCCccEEecc
Q 046265 195 GLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQ--IPKSL--RNFTSLNIVHLEQNHLTGN---IYEVFGIYPNLTFLDLS 267 (639)
Q Consensus 195 ~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~p~~~--~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~Ls 267 (639)
+.|++++|++.+. +|..+ ..+++|++|++++|.+++. ....+..+++|++|+++
T Consensus 176 -------------------~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls 236 (312)
T 1wwl_A 176 -------------------STLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLS 236 (312)
T ss_dssp -------------------CEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECT
T ss_pred -------------------CEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECC
Confidence 4555666666554 23334 7899999999999999942 23456788999999988
Q ss_pred CCcccccccCcCCccccccC-ccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCE
Q 046265 268 QNNFYGSLNFSMNNITRSIP-PKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEY 346 (639)
Q Consensus 268 ~N~l~~~l~ls~n~~~~~~p-~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 346 (639)
+|++. +..| ..+..+++|+.|++++|+++ .+|..+. ++|+.|++++|++++. |. +..+++|+.
T Consensus 237 ~N~l~-----------~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~ 300 (312)
T 1wwl_A 237 HNSLR-----------DAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGN 300 (312)
T ss_dssp TSCCC-----------SSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEE
T ss_pred CCcCC-----------cccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCE
Confidence 77764 3443 34556889999999999998 7787776 8999999999999966 66 899999999
Q ss_pred EeCCCCCCC
Q 046265 347 LDLSTNYNN 355 (639)
Q Consensus 347 L~Ls~N~~~ 355 (639)
|++++|++.
T Consensus 301 L~L~~N~l~ 309 (312)
T 1wwl_A 301 LSLKGNPFL 309 (312)
T ss_dssp EECTTCTTT
T ss_pred EeccCCCCC
Confidence 999997643
No 206
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.94 E-value=1.8e-27 Score=238.95 Aligned_cols=168 Identities=27% Similarity=0.468 Sum_probs=140.9
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
.++|+..+.||+|+||.||+|.. .+++.||||.+..... .......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 46788889999999999999954 5678999999864221 112346688999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||+++|+|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 99999999999987653 477899999999999999999998 999999999999999999999999999876543
Q ss_pred CCCCcceeeeeceeeCCC
Q 046265 622 DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~~~~~~gt~~Y~APE 639 (639)
. ......||+.|+|||
T Consensus 162 ~--~~~~~~~~~~y~aPE 177 (279)
T 3fdn_A 162 S--RRTDLCGTLDYLPPE 177 (279)
T ss_dssp --------CCCCTTCCHH
T ss_pred c--cccccCCCCCccCHh
Confidence 2 234567999999998
No 207
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.94 E-value=1.6e-27 Score=247.07 Aligned_cols=176 Identities=22% Similarity=0.275 Sum_probs=141.3
Q ss_pred HHHhccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCC---CChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC
Q 046265 461 IRATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPH---PDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR 536 (639)
Q Consensus 461 ~~~~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 536 (639)
....++|+..+.||+|+||.||+|.. .+++.||||.+.... ......+.+.+|+.++++++|||||++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 45567899999999999999999955 567899999986431 12334567899999999999999999999999999
Q ss_pred ceeEEecccCCCChhHHhhcCCC-------------------------------------CCCcCHHHHHHHHHHHHHHH
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAA-------------------------------------IDEFSWTVRMNVIKSVANTL 579 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~-------------------------------------~~~~~~~~~~~i~~~i~~~l 579 (639)
..++||||+++|+|.+++..... ...+++..+..++.|++.|+
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 99999999999999999852100 11235667788999999999
Q ss_pred HHHHhCCCCCeEeecCCCCCeeeCCCC--ceEEccccccccCCCCCC----CcceeeeeceeeCCC
Q 046265 580 SYMHHDYFPPIVHRDISSKNVLLGLDY--DAHVSDFGISKFLKPDSS----NWSEFVGTFGYVAPI 639 (639)
Q Consensus 580 ~~lH~~~~~~iiHrdlk~~Nill~~~~--~~kl~DfGla~~~~~~~~----~~~~~~gt~~Y~APE 639 (639)
+|||.. +|+||||||+||+++.++ .+||+|||+++.+..... ......||+.|+|||
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE 244 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE 244 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCch
Confidence 999999 999999999999998766 899999999986532211 234568999999998
No 208
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.94 E-value=3.5e-27 Score=238.20 Aligned_cols=168 Identities=27% Similarity=0.435 Sum_probs=134.4
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
..+|+..+.||+|+||.||+|.... .||||.++.........+.+.+|+.++++++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 4567888999999999999998653 599999987665566677899999999999999999999965 4567899999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC-
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD- 622 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~- 622 (639)
|+++++|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 174 (289)
T 3og7_A 100 WCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174 (289)
T ss_dssp CCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred ecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccccc
Confidence 999999999996543 3588899999999999999999998 9999999999999999999999999999865432
Q ss_pred -CCCcceeeeeceeeCCC
Q 046265 623 -SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 -~~~~~~~~gt~~Y~APE 639 (639)
........||+.|+|||
T Consensus 175 ~~~~~~~~~gt~~y~aPE 192 (289)
T 3og7_A 175 GSHQFEQLSGSILWMAPE 192 (289)
T ss_dssp ---------CCCTTCCHH
T ss_pred ccccccccCCCccccCch
Confidence 12234467999999998
No 209
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=6.1e-28 Score=251.11 Aligned_cols=170 Identities=22% Similarity=0.299 Sum_probs=143.9
Q ss_pred hccCCCcceeccCCCceEEEEEc----CCCcEEEEEEccCCCC--ChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCC
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL----PSWEIVAVKKFHSPHP--DMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPR 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 536 (639)
.++|+..+.||+|+||.||+|+. .+++.||||.++.... .....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36788899999999999999976 4789999999874321 112234567899999999 5999999999999999
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccccc
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGIS 616 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla 616 (639)
..|+||||+++|+|.+++.... .+++..+..++.|+++||+|||.. +|+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 9999999999999999997643 478899999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCC-CcceeeeeceeeCCC
Q 046265 617 KFLKPDSS-NWSEFVGTFGYVAPI 639 (639)
Q Consensus 617 ~~~~~~~~-~~~~~~gt~~Y~APE 639 (639)
+.+..... .....+||+.|+|||
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE 230 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPD 230 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHH
T ss_pred eecccCCCCcccCcccCcCccChh
Confidence 87643222 223468999999998
No 210
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.94 E-value=1.1e-27 Score=241.55 Aligned_cols=170 Identities=22% Similarity=0.372 Sum_probs=146.6
Q ss_pred HhccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
..++|+..+.||+|+||.||+|... +++.||||.+.... ...+.+.+|+.++++++||||+++++++..++..|+|
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 3567788899999999999999655 57889999997532 3456789999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||+++|+|.+++..... ..+++..+..++.+++.|++|||.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 88 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp EECCTTEEHHHHHHHCCT-TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EEcCCCCcHHHHHHhccc-CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 999999999999976433 4578899999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-CcceeeeeceeeCCC
Q 046265 622 DSS-NWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~-~~~~~~gt~~Y~APE 639 (639)
... ......||+.|+|||
T Consensus 164 ~~~~~~~~~~~~~~y~aPE 182 (288)
T 3kfa_A 164 DTYTAHAGAKFPIKWTAPE 182 (288)
T ss_dssp SSSEEETTEEECGGGCCHH
T ss_pred CccccccCCccccCcCChh
Confidence 332 223456788999998
No 211
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.94 E-value=3.2e-27 Score=249.46 Aligned_cols=163 Identities=19% Similarity=0.265 Sum_probs=129.3
Q ss_pred ccCCCc-ceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhc-cccCceeeeEEEEEc----CCc
Q 046265 465 NNFDAK-YCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTE-LRHRNVVKFYGFSFH----PRQ 537 (639)
Q Consensus 465 ~~f~~~-~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-l~H~niv~l~~~~~~----~~~ 537 (639)
++|... ++||+|+||+||+|.. .+++.||||++.. ...+.+|+.++.+ .+||||++++++|.. .+.
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~ 133 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence 445444 6899999999999954 5789999999863 1346788888754 589999999999875 557
Q ss_pred eeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC---CCceEEcccc
Q 046265 538 SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL---DYDAHVSDFG 614 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~---~~~~kl~DfG 614 (639)
.|+||||+++|+|.+++..... ..+++..+..++.|++.||+|||.. +|+||||||+||+++. ++.+||+|||
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEEeCCCCcHHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 8999999999999999986432 3588999999999999999999998 9999999999999987 7899999999
Q ss_pred ccccCCCCCCCcceeeeeceeeCCC
Q 046265 615 ISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 615 la~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+++..... ......+||+.|||||
T Consensus 210 ~a~~~~~~-~~~~~~~gt~~y~aPE 233 (400)
T 1nxk_A 210 FAKETTSH-NSLTTPCYTPYYVAPE 233 (400)
T ss_dssp TCEECC------------CTTCCGG
T ss_pred cccccCCC-CccccCCCCCCccCHh
Confidence 99876532 2234578999999998
No 212
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.94 E-value=7.9e-27 Score=237.28 Aligned_cols=167 Identities=26% Similarity=0.413 Sum_probs=146.5
Q ss_pred ccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 465 NNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
+.|+..+.||+|+||.||+|. ..+++.||||.+...... ...+.+.+|+.++++++||||+++++++...+..|+|||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 457778899999999999995 457899999999765432 345678999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
|+++++|.+++... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||++..+....
T Consensus 101 ~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 173 (303)
T 3a7i_A 101 YLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 173 (303)
T ss_dssp CCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred eCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence 99999999998642 478899999999999999999998 99999999999999999999999999998765443
Q ss_pred CCcceeeeeceeeCCC
Q 046265 624 SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~~~~~~~gt~~Y~APE 639 (639)
.......||+.|+|||
T Consensus 174 ~~~~~~~~~~~y~aPE 189 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAPE 189 (303)
T ss_dssp CCBCCCCSCGGGCCHH
T ss_pred cccCccCCCcCccCHH
Confidence 3445568999999998
No 213
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.94 E-value=2.4e-27 Score=243.34 Aligned_cols=173 Identities=19% Similarity=0.344 Sum_probs=145.7
Q ss_pred HhccCCCcceeccCCCceEEEEEcC------CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAELP------SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR 536 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 536 (639)
..++|+..+.||+|+||.||+|... +++.||||.+.... .......+.+|+.++++++||||+++++++.+.+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 101 (322)
T 1p4o_A 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 101 (322)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC
Confidence 3467888899999999999999654 36789999997543 3344567899999999999999999999999999
Q ss_pred ceeEEecccCCCChhHHhhcCC-------CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceE
Q 046265 537 QSFLLYEYLGRGSLAIILSNDA-------AIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAH 609 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~k 609 (639)
..++||||+++|+|.+++.... ....+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+|
T Consensus 102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~k 178 (322)
T 1p4o_A 102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 178 (322)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEE
T ss_pred ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEE
Confidence 9999999999999999987532 123568899999999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCC--CcceeeeeceeeCCC
Q 046265 610 VSDFGISKFLKPDSS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 610 l~DfGla~~~~~~~~--~~~~~~gt~~Y~APE 639 (639)
|+|||+++....... ......||+.|+|||
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 210 (322)
T 1p4o_A 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210 (322)
T ss_dssp ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHH
T ss_pred ECcCccccccccccccccccCCCCCCCccChh
Confidence 999999986543221 123356889999998
No 214
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.94 E-value=6.8e-27 Score=238.56 Aligned_cols=173 Identities=24% Similarity=0.326 Sum_probs=135.5
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCC-CChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPH-PDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
..+|+..+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|+.++++++||||+++++++..++..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35688889999999999999964 678999999997543 2344567789999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCC-CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCC
Q 046265 542 YEYLGRGSLAIILSNDA-AIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
|||+++|+|.+++.... ....+++..+..++.++++|++|||.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 99999999999986421 223578899999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCCcceeeeeceeeCCC
Q 046265 621 PDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~~~~~~gt~~Y~APE 639 (639)
..........||+.|+|||
T Consensus 188 ~~~~~~~~~~~~~~y~aPE 206 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPE 206 (310)
T ss_dssp -----------CCSSCCHH
T ss_pred CCCccccccCCCeeEeChH
Confidence 4433344567999999998
No 215
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.94 E-value=7.2e-28 Score=244.78 Aligned_cols=162 Identities=27% Similarity=0.350 Sum_probs=126.3
Q ss_pred ccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhc--cccCceeeeEEEEEcCC----ce
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTE--LRHRNVVKFYGFSFHPR----QS 538 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~----~~ 538 (639)
++|+..+.||+|+||.||+|+.. ++.||||.+... ....+.+|.+++.. ++||||+++++++...+ ..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 57889999999999999999765 789999998642 23456778888877 79999999999998776 78
Q ss_pred eEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEeecCCCCCeeeCCCCceEE
Q 046265 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH--------HDYFPPIVHRDISSKNVLLGLDYDAHV 610 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH--------~~~~~~iiHrdlk~~Nill~~~~~~kl 610 (639)
++||||+++|+|.+++... .+++..+..++.|++.|++||| .. +|+||||||+||+++.++.+||
T Consensus 77 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-B
T ss_pred EEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEE
Confidence 9999999999999999653 3566778899999999999999 55 9999999999999999999999
Q ss_pred ccccccccCCCCCCC----cceeeeeceeeCCC
Q 046265 611 SDFGISKFLKPDSSN----WSEFVGTFGYVAPI 639 (639)
Q Consensus 611 ~DfGla~~~~~~~~~----~~~~~gt~~Y~APE 639 (639)
+|||+|+........ ....+||+.|+|||
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE 182 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHH
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHh
Confidence 999999765433221 23357999999998
No 216
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.94 E-value=3e-27 Score=253.89 Aligned_cols=168 Identities=20% Similarity=0.389 Sum_probs=137.9
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
.++|+..+.||+|+||.||+|...++..||||+++... ...+.|.+|+.++++++||||+++++++.+ +..|+|||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 35677788999999999999998888889999998543 234678999999999999999999999876 67899999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
|+++|+|.+++..... ..+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+++......
T Consensus 259 ~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp CCTTCBHHHHHSHHHH-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred hhcCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 9999999999974321 2478899999999999999999998 99999999999999999999999999998765322
Q ss_pred C-CcceeeeeceeeCCC
Q 046265 624 S-NWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~-~~~~~~gt~~Y~APE 639 (639)
. ......+++.|+|||
T Consensus 335 ~~~~~~~~~~~~y~aPE 351 (452)
T 1fmk_A 335 YTARQGAKFPIKWTAPE 351 (452)
T ss_dssp --------CCGGGSCHH
T ss_pred eecccCCcccccccCHh
Confidence 1 223345778999998
No 217
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.94 E-value=7.2e-27 Score=239.05 Aligned_cols=167 Identities=22% Similarity=0.327 Sum_probs=136.5
Q ss_pred ccCCC-cceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCceeEE
Q 046265 465 NNFDA-KYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 465 ~~f~~-~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 541 (639)
+.|.. .+.||+|+||.||+|.. .+++.||||.+.... ....+.+.+|++++.++ +||||+++++++.+++..|+|
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv 89 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV 89 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 45655 36899999999999964 578999999997543 23456788999999885 799999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc---eEEcccccccc
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD---AHVSDFGISKF 618 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~---~kl~DfGla~~ 618 (639)
|||+++|+|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++. +||+|||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 90 FEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp EECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 99999999999997653 477899999999999999999999 9999999999999988765 99999999986
Q ss_pred CCCCCC-------CcceeeeeceeeCCC
Q 046265 619 LKPDSS-------NWSEFVGTFGYVAPI 639 (639)
Q Consensus 619 ~~~~~~-------~~~~~~gt~~Y~APE 639 (639)
...... .....+||+.|+|||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE 191 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPE 191 (316)
T ss_dssp ------------------CCSGGGCCHH
T ss_pred cccCCccccccccccccccCCcCccChH
Confidence 542211 122356999999998
No 218
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.94 E-value=3.2e-27 Score=242.89 Aligned_cols=173 Identities=22% Similarity=0.276 Sum_probs=142.7
Q ss_pred HHhccCCCc-ceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc-cCceeeeEEEEEcCCce
Q 046265 462 RATNNFDAK-YCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR-HRNVVKFYGFSFHPRQS 538 (639)
Q Consensus 462 ~~~~~f~~~-~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~ 538 (639)
...+.|... +.||+|+||.||+|.. .+++.||||.+............+.+|+.++.+++ ||||+++++++...+..
T Consensus 25 ~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~ 104 (327)
T 3lm5_A 25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEI 104 (327)
T ss_dssp HHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeE
Confidence 334556555 7899999999999965 46899999999865444445677899999999985 69999999999999999
Q ss_pred eEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC---CCceEEccccc
Q 046265 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL---DYDAHVSDFGI 615 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~---~~~~kl~DfGl 615 (639)
|+||||+++|+|.+++..... ..+++..+..++.|++.||+|||.. +|+||||||+||+++. ++.+||+|||+
T Consensus 105 ~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 105 ILILEYAAGGEIFSLCLPELA-EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred EEEEEecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 999999999999999865422 4588999999999999999999998 9999999999999987 78999999999
Q ss_pred cccCCCCCCCcceeeeeceeeCCC
Q 046265 616 SKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 616 a~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
++...... .....+||+.|+|||
T Consensus 181 a~~~~~~~-~~~~~~gt~~y~aPE 203 (327)
T 3lm5_A 181 SRKIGHAC-ELREIMGTPEYLAPE 203 (327)
T ss_dssp CEEC----------CCCGGGCCHH
T ss_pred ccccCCcc-ccccccCCcCccCCe
Confidence 98765332 234568999999998
No 219
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.94 E-value=7.5e-27 Score=240.19 Aligned_cols=169 Identities=24% Similarity=0.339 Sum_probs=144.0
Q ss_pred hccCCCcceeccCCCceEEEEEc-----CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEc--CC
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-----PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH--PR 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~ 536 (639)
.++|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++.. .+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 99 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ 99 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence 35677889999999999999973 467899999997643 4456678999999999999999999999874 45
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccccc
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGIS 616 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla 616 (639)
..|+||||+++|+|.+++..... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred eEEEEEeecCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccc
Confidence 68999999999999999976432 478899999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCC---CcceeeeeceeeCCC
Q 046265 617 KFLKPDSS---NWSEFVGTFGYVAPI 639 (639)
Q Consensus 617 ~~~~~~~~---~~~~~~gt~~Y~APE 639 (639)
+....... ......||+.|+|||
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE 200 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPE 200 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHH
T ss_pred eecccCCccceeeccCCccccccCHH
Confidence 87654332 123356888999998
No 220
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.94 E-value=7.9e-27 Score=234.73 Aligned_cols=168 Identities=21% Similarity=0.335 Sum_probs=142.3
Q ss_pred ccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCC----hhhHHHHHHHHHHHhccccCceeeeEEEEEcCCcee
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPD----MVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSF 539 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 539 (639)
++|+..+.||+|+||.||+|... +++.||||.+...... ....+.+.+|+.++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56888899999999999999665 6899999998764322 123577899999999999999999999999999999
Q ss_pred EEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC----ceEEccccc
Q 046265 540 LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY----DAHVSDFGI 615 (639)
Q Consensus 540 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~----~~kl~DfGl 615 (639)
+||||+++++|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++ .+||+|||+
T Consensus 85 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 9999999999999997543 478899999999999999999998 999999999999998877 899999999
Q ss_pred cccCCCCCCCcceeeeeceeeCCC
Q 046265 616 SKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 616 a~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+....... ......||+.|+|||
T Consensus 159 ~~~~~~~~-~~~~~~~~~~y~aPE 181 (283)
T 3bhy_A 159 AHKIEAGN-EFKNIFGTPEFVAPE 181 (283)
T ss_dssp CEECC---------CCCGGGCCHH
T ss_pred ceeccCCC-cccccCCCcCccCcc
Confidence 98765332 234467999999998
No 221
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.94 E-value=4e-27 Score=234.70 Aligned_cols=167 Identities=21% Similarity=0.355 Sum_probs=144.6
Q ss_pred ccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEecc
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 544 (639)
++|+..+.||+|+||.||+|...+++.||||.+..... ..+.+.+|++++++++||||+++++++..++..++||||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 56777889999999999999888889999999986432 246789999999999999999999999999999999999
Q ss_pred cCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC-
Q 046265 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS- 623 (639)
Q Consensus 545 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~- 623 (639)
+++++|.+++.... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 85 MEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp CTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 99999999997643 2578899999999999999999998 99999999999999999999999999998764321
Q ss_pred CCcceeeeeceeeCCC
Q 046265 624 SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 ~~~~~~~gt~~Y~APE 639 (639)
.......|++.|+|||
T Consensus 160 ~~~~~~~~~~~y~aPE 175 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPE 175 (267)
T ss_dssp HSTTSTTCCGGGCCHH
T ss_pred cccccccccccccChh
Confidence 1122345788999998
No 222
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.94 E-value=8.7e-27 Score=233.48 Aligned_cols=169 Identities=27% Similarity=0.377 Sum_probs=145.8
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.++|+..+.||+|+||.||+|... +++.||||.+..... ....+.+.+|+.++++++||||+++++++.+++..|+||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 467888999999999999999654 789999999875332 234567899999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++++|.+++.... .+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||.+..+...
T Consensus 85 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 85 EYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp ECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EecCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 9999999999987543 478899999999999999999998 9999999999999999999999999999865322
Q ss_pred C--CCcceeeeeceeeCCC
Q 046265 623 S--SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~--~~~~~~~gt~~Y~APE 639 (639)
. ......+||+.|+|||
T Consensus 159 ~~~~~~~~~~~~~~y~aPE 177 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPE 177 (276)
T ss_dssp TEECCBCCCCSCGGGCCGG
T ss_pred cchhcccCCccccCccChH
Confidence 1 2234567999999998
No 223
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.94 E-value=3.5e-27 Score=242.59 Aligned_cols=168 Identities=20% Similarity=0.337 Sum_probs=134.4
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcE----EEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCcee
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEI----VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSF 539 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 539 (639)
++|+..+.||+|+||.||+|.. .+++. ||+|.+.... .....+.+.+|+.++++++||||++++++|..+. .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 5677889999999999999964 34443 6888886432 2334567899999999999999999999998754 78
Q ss_pred EEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 540 LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 540 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
+||||+++|+|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+|+.+
T Consensus 93 ~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 9999999999999997644 3588899999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCC--cceeeeeceeeCCC
Q 046265 620 KPDSSN--WSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~~--~~~~~gt~~Y~APE 639 (639)
...... .....||+.|+|||
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE 189 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALE 189 (327)
T ss_dssp TTTCC-------CCCGGGSCHH
T ss_pred cCCcccccccCCCccccccChH
Confidence 543322 23356788999998
No 224
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.94 E-value=1.7e-26 Score=236.48 Aligned_cols=165 Identities=22% Similarity=0.313 Sum_probs=140.2
Q ss_pred CCCcceeccCCCceEEEEEc-----CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcC--Ccee
Q 046265 467 FDAKYCIGTAGQASVYKAEL-----PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP--RQSF 539 (639)
Q Consensus 467 f~~~~~ig~g~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~ 539 (639)
|+..+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++.+. ...+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 47788999999999998854 267889999998643 344567789999999999999999999999874 5689
Q ss_pred EEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 540 LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 540 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
+||||+++|+|.+++... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 112 lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 999999999999999754 378899999999999999999999 9999999999999999999999999999887
Q ss_pred CCCCC---CcceeeeeceeeCCC
Q 046265 620 KPDSS---NWSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~---~~~~~~gt~~Y~APE 639 (639)
..... ......||+.|+|||
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE 207 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPE 207 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHH
T ss_pred cccccccccccCCCCCceeeChH
Confidence 54332 123356888999998
No 225
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.94 E-value=5.8e-27 Score=234.12 Aligned_cols=168 Identities=24% Similarity=0.390 Sum_probs=130.9
Q ss_pred ccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCC--hhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPD--MVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.+|+..+.||+|+||.||+|... ++.||||.++..... ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 56778899999999999999865 789999998754322 223467889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC--------CCceEEcccc
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL--------DYDAHVSDFG 614 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~--------~~~~kl~DfG 614 (639)
||+++++|.+++... .+++..+..++.|+++|++|||.....+|+||||||+||+++. ++.+||+|||
T Consensus 86 e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp ECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999998643 4788999999999999999999983333999999999999986 6789999999
Q ss_pred ccccCCCCCCCcceeeeeceeeCCC
Q 046265 615 ISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 615 la~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+++...... .....||+.|+|||
T Consensus 162 ~~~~~~~~~--~~~~~~~~~y~aPE 184 (271)
T 3dtc_A 162 LAREWHRTT--KMSAAGAYAWMAPE 184 (271)
T ss_dssp C---------------CCGGGSCHH
T ss_pred ccccccccc--ccCCCCccceeCHH
Confidence 998765332 23457999999998
No 226
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.94 E-value=2.7e-27 Score=238.87 Aligned_cols=165 Identities=21% Similarity=0.341 Sum_probs=141.4
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CC-------cEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcC
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SW-------EIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP 535 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 535 (639)
.++|...+.||+|+||.||+|... ++ ..||+|.+.... ....+.+.+|+.++++++||||+++++++.++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 356778899999999999999644 23 469999986532 34457789999999999999999999999999
Q ss_pred CceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc--------
Q 046265 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD-------- 607 (639)
Q Consensus 536 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~-------- 607 (639)
+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||.. +|+||||||+||+++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CCCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccce
Confidence 99999999999999999997643 2478899999999999999999999 9999999999999988877
Q ss_pred eEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 608 AHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 608 ~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+||+|||++..... .....||+.|+|||
T Consensus 160 ~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE 187 (289)
T 4fvq_A 160 IKLSDPGISITVLP----KDILQERIPWVPPE 187 (289)
T ss_dssp EEECCCCSCTTTSC----HHHHHHTTTTSCHH
T ss_pred eeeccCcccccccC----ccccCCcCcccCHH
Confidence 99999999876532 23456899999998
No 227
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.94 E-value=1.6e-26 Score=241.04 Aligned_cols=166 Identities=21% Similarity=0.252 Sum_probs=143.1
Q ss_pred HhccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc-----cCceeeeEEEEEcCC
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR-----HRNVVKFYGFSFHPR 536 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~~~~~~~~ 536 (639)
..++|+..+.||+|+||.||+|.. .+++.||||.+... ....+.+..|+.++++++ |||||++++++...+
T Consensus 33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~ 109 (360)
T 3llt_A 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD 109 (360)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT
T ss_pred ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC
Confidence 357788899999999999999965 57899999998742 334556788999999886 999999999999999
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC------------
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL------------ 604 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~------------ 604 (639)
..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||.. +|+||||||+||+++.
T Consensus 110 ~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~ 184 (360)
T 3llt_A 110 HMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRR 184 (360)
T ss_dssp EEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEEC
T ss_pred eeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhc
Confidence 999999999 9999999976443 3478899999999999999999998 9999999999999975
Q ss_pred -------------CCceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 605 -------------DYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 605 -------------~~~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
++.+||+|||+|+..... ....+||+.|+|||
T Consensus 185 ~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE 229 (360)
T 3llt_A 185 VTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPE 229 (360)
T ss_dssp TTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHH
T ss_pred ccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcH
Confidence 789999999999875432 23467999999998
No 228
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=1.1e-26 Score=239.85 Aligned_cols=167 Identities=25% Similarity=0.363 Sum_probs=137.1
Q ss_pred HhccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhc--cccCceeeeEEEEEcC----C
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTE--LRHRNVVKFYGFSFHP----R 536 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~----~ 536 (639)
..++|+..+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++.. ++||||+++++++... .
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 4578999999999999999999876 799999998642 23344555555554 4899999999999887 6
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEeecCCCCCeeeCCCCceEEc
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDY-----FPPIVHRDISSKNVLLGLDYDAHVS 611 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-----~~~iiHrdlk~~Nill~~~~~~kl~ 611 (639)
..|+||||+++|+|.++++.. .+++..+..++.|++.|++|||... .++|+||||||+||+++.++.+||+
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred ceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 789999999999999999753 4788999999999999999999762 3489999999999999999999999
Q ss_pred cccccccCCCCCCC----cceeeeeceeeCCC
Q 046265 612 DFGISKFLKPDSSN----WSEFVGTFGYVAPI 639 (639)
Q Consensus 612 DfGla~~~~~~~~~----~~~~~gt~~Y~APE 639 (639)
|||+|+.+...... ....+||+.|+|||
T Consensus 185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE 216 (337)
T 3mdy_A 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216 (337)
T ss_dssp CCTTCEECC---------CCSSCSCGGGCCHH
T ss_pred eCCCceeeccccccccCCCCCCccCcceeChh
Confidence 99999876543221 12457999999998
No 229
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.94 E-value=9.3e-27 Score=237.89 Aligned_cols=174 Identities=19% Similarity=0.282 Sum_probs=134.8
Q ss_pred HhccCCCcceeccCCCceEEEEEcC----CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC--
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAELP----SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR-- 536 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-- 536 (639)
..++|...+.||+|+||.||+|... +++.||||.+..........+.+.+|+.++++++||||+++++++...+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3567788899999999999999643 3468999999866555555677899999999999999999999998765
Q ss_pred ---ceeEEecccCCCChhHHhhcCC---CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEE
Q 046265 537 ---QSFLLYEYLGRGSLAIILSNDA---AIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHV 610 (639)
Q Consensus 537 ---~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl 610 (639)
..++||||+++|+|.+++.... ....+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEE
Confidence 3599999999999999985322 234689999999999999999999998 9999999999999999999999
Q ss_pred ccccccccCCCCCC--CcceeeeeceeeCCC
Q 046265 611 SDFGISKFLKPDSS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 611 ~DfGla~~~~~~~~--~~~~~~gt~~Y~APE 639 (639)
+|||+++....... ......+++.|+|||
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 219 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIE 219 (313)
T ss_dssp CSCSCC----------------CCGGGSCHH
T ss_pred eecCcceecccccccCcccccCCCccccCch
Confidence 99999987643321 123356788999998
No 230
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.94 E-value=6e-27 Score=244.52 Aligned_cols=177 Identities=21% Similarity=0.277 Sum_probs=141.1
Q ss_pred hHHHHHHHhccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCC---------hhhHHHHHHHHHHHhccccCcee
Q 046265 456 LYEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPD---------MVVQQAFSNEIKALTELRHRNVV 526 (639)
Q Consensus 456 ~~~~~~~~~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~~e~~~l~~l~H~niv 526 (639)
...++....++|...+.||+|+||.||+|...+++.||||++...... ....+.+.+|+.++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 456778889999999999999999999998888999999998653321 12236789999999999999999
Q ss_pred eeEEEEEcC-----CceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCee
Q 046265 527 KFYGFSFHP-----RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVL 601 (639)
Q Consensus 527 ~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil 601 (639)
++++++... ...|+||||++ |++.+.+.... ..+++..+..++.|++.|++|||.. +|+||||||+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 999998543 35799999997 68888876543 3578899999999999999999999 9999999999999
Q ss_pred eCCCCceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 602 LGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 602 l~~~~~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
++.++.+||+|||+++..... .......||+.|+|||
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE 203 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPE 203 (362)
T ss_dssp ECTTCCEEECCTTC----------------CGGGCCHH
T ss_pred EcCCCCEEEEecCcccccccc-cccceecccceecCcH
Confidence 999999999999999865433 2234568999999998
No 231
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.94 E-value=1e-26 Score=237.20 Aligned_cols=170 Identities=24% Similarity=0.343 Sum_probs=139.3
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
.++|+..+.||+|+||.||+|.. .+++.||||.+..... .....+.+.+|+.++++++||||+++++++..++..|+|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 46788899999999999999965 4788999999875432 233457789999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||+++++|.+++.... .+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 113 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp EECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 99999999999997643 478899999999999999999998 999999999999999999999999999987643
Q ss_pred CC-CCcceeeeeceeeCCC
Q 046265 622 DS-SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~-~~~~~~~gt~~Y~APE 639 (639)
.. .......||+.|+|||
T Consensus 187 ~~~~~~~~~~~~~~y~aPE 205 (309)
T 2h34_A 187 EKLTQLGNTVGTLYYMAPE 205 (309)
T ss_dssp ----------CCGGGCCGG
T ss_pred cccccccccCCCcCccCHH
Confidence 32 2233467999999998
No 232
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.94 E-value=6.5e-27 Score=235.39 Aligned_cols=165 Identities=22% Similarity=0.429 Sum_probs=141.6
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEc--------
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH-------- 534 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-------- 534 (639)
..+|+..+.||+|+||.||+|... +++.||||.+.... +.+.+|+.++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 456888899999999999999765 78999999997532 246789999999999999999998864
Q ss_pred --------CCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC
Q 046265 535 --------PRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY 606 (639)
Q Consensus 535 --------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~ 606 (639)
....|+||||+++|+|.+++..... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG-EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGGG-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCC
Confidence 3457999999999999999975432 3578899999999999999999998 999999999999999999
Q ss_pred ceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 607 DAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 607 ~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
.+||+|||+++...... ......||+.|+|||
T Consensus 160 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE 191 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPE 191 (284)
T ss_dssp EEEECCCTTCEESSCCS-CCCCCCSCCTTSCHH
T ss_pred CEEECcchhheeccccc-cccccCCcccccChh
Confidence 99999999998775432 233457999999998
No 233
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.94 E-value=1.2e-27 Score=251.18 Aligned_cols=168 Identities=15% Similarity=0.180 Sum_probs=136.5
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCC-CChhhHHHHHHHH---HHHhccccCceeeeE-------EE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPH-PDMVVQQAFSNEI---KALTELRHRNVVKFY-------GF 531 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~---~~l~~l~H~niv~l~-------~~ 531 (639)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+ ..+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45677789999999999999975 568999999997542 2334567789999 556666899999998 66
Q ss_pred EEcCCc-----------------eeEEecccCCCChhHHhhcCCCC----CCcCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 046265 532 SFHPRQ-----------------SFLLYEYLGRGSLAIILSNDAAI----DEFSWTVRMNVIKSVANTLSYMHHDYFPPI 590 (639)
Q Consensus 532 ~~~~~~-----------------~~lv~e~~~~g~L~~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~i 590 (639)
+..++. .|+||||+ +|+|.+++...+.. ..++|..+..++.|+++||+|||.. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 665532 78999999 68999999754322 1345688889999999999999999 99
Q ss_pred EeecCCCCCeeeCCCCceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 591 iHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+||||||+||+++.++.+||+|||+|+.... .....+| +.|+|||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE 272 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPE 272 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChh
Confidence 9999999999999999999999999986432 3345678 9999998
No 234
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.94 E-value=8.2e-27 Score=236.83 Aligned_cols=169 Identities=23% Similarity=0.375 Sum_probs=138.1
Q ss_pred HhccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEc-------
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH------- 534 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------- 534 (639)
..++|+..+.||+|+||.||+|.. .+++.||||.+.. .....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 356788899999999999999965 5789999999864 23345678899999999999999999999865
Q ss_pred ------CCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCce
Q 046265 535 ------PRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDA 608 (639)
Q Consensus 535 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~ 608 (639)
.+..|+||||+++|+|.+++.... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~ 155 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNV 155 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCE
Confidence 346799999999999999997543 2467788999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCC--------------CCcceeeeeceeeCCC
Q 046265 609 HVSDFGISKFLKPDS--------------SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 609 kl~DfGla~~~~~~~--------------~~~~~~~gt~~Y~APE 639 (639)
||+|||+++...... .......||+.|+|||
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 200 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATE 200 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHH
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcc
Confidence 999999998764221 1223467999999998
No 235
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.94 E-value=9.4e-27 Score=243.70 Aligned_cols=166 Identities=19% Similarity=0.285 Sum_probs=132.6
Q ss_pred hccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC------
Q 046265 464 TNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR------ 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------ 536 (639)
.++|+..+.||+|+||.||+|. ..+++.||||++..........+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 3568888999999999999995 457899999999865545555677889999999999999999999998665
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccccc
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGIS 616 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla 616 (639)
..|+||||+++ ++.+.+.. .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+|
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 174 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred ceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecc
Confidence 67999999974 78777753 377889999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCCcceeeeeceeeCCC
Q 046265 617 KFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 617 ~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+..... ......+||+.|+|||
T Consensus 175 ~~~~~~-~~~~~~~gt~~y~aPE 196 (371)
T 2xrw_A 175 RTAGTS-FMMTPYVVTRYYRAPE 196 (371)
T ss_dssp ----------------CTTCCHH
T ss_pred cccccc-cccCCceecCCccCHH
Confidence 876432 2234568999999998
No 236
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=6.1e-27 Score=244.77 Aligned_cols=168 Identities=20% Similarity=0.291 Sum_probs=130.3
Q ss_pred cCCCcceeccCCCceEEEEEcC--CC--cEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEc-CCceeE
Q 046265 466 NFDAKYCIGTAGQASVYKAELP--SW--EIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH-PRQSFL 540 (639)
Q Consensus 466 ~f~~~~~ig~g~~g~vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~~l 540 (639)
.|...+.||+|+||.||+|... ++ ..||||.+.... .....+.|.+|+.++++++|||||+++++|.. ++..|+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 3556689999999999999653 22 468999987533 33456779999999999999999999999765 457899
Q ss_pred EecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCC
Q 046265 541 LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
||||+++|+|.++++.... .+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 169 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EEECCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEECCCCCCHHHHHhhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 9999999999999976442 467889999999999999999998 99999999999999999999999999998764
Q ss_pred CCCC----CcceeeeeceeeCCC
Q 046265 621 PDSS----NWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~----~~~~~~gt~~Y~APE 639 (639)
.... ......||+.|+|||
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE 266 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALE 266 (373)
T ss_dssp --------------CCGGGSCHH
T ss_pred ccccccccccCCCCCcccccChH
Confidence 3221 123356788999998
No 237
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.94 E-value=8.2e-27 Score=233.72 Aligned_cols=168 Identities=24% Similarity=0.388 Sum_probs=136.6
Q ss_pred ccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
++|...+.||+|+||.||+|... +++.||||.+..... .....+.+.+|+.++++++||||+++++++..++..|+||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 56778899999999999999764 789999999864221 1123457889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++++|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||++......
T Consensus 91 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp ECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred eccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 9999999999997653 377899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
. ......||+.|+|||
T Consensus 165 ~-~~~~~~~~~~y~aPE 180 (276)
T 2h6d_A 165 E-FLRTSCGSPNYAAPE 180 (276)
T ss_dssp -------------CCTG
T ss_pred c-ceecccCCccccCHH
Confidence 2 233467999999998
No 238
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.94 E-value=1.2e-26 Score=237.19 Aligned_cols=173 Identities=21% Similarity=0.321 Sum_probs=145.5
Q ss_pred HhccCCCcceeccCCCceEEEEEc------CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcC
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHP 535 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~ 535 (639)
..++|+..+.||+|+||.||+|.. .+++.||||.+.... .....+.+.+|+.++.++ +||||+++++++...
T Consensus 25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 103 (316)
T 2xir_A 25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 103 (316)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence 356788899999999999999963 456889999997643 334456789999999999 699999999999876
Q ss_pred C-ceeEEecccCCCChhHHhhcCCC-------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCee
Q 046265 536 R-QSFLLYEYLGRGSLAIILSNDAA-------------IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVL 601 (639)
Q Consensus 536 ~-~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nil 601 (639)
+ ..++||||+++|+|.+++..... ...+++..+..++.|+++|++|||.. +|+||||||+||+
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil 180 (316)
T 2xir_A 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNIL 180 (316)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEE
Confidence 5 58999999999999999976543 12278899999999999999999998 9999999999999
Q ss_pred eCCCCceEEccccccccCCCCCCC--cceeeeeceeeCCC
Q 046265 602 LGLDYDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVAPI 639 (639)
Q Consensus 602 l~~~~~~kl~DfGla~~~~~~~~~--~~~~~gt~~Y~APE 639 (639)
++.++.+||+|||+++........ .....||+.|+|||
T Consensus 181 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE 220 (316)
T 2xir_A 181 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 220 (316)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHH
T ss_pred ECCCCCEEECCCccccccccCccceeccCCCcceeecCch
Confidence 999999999999999876543221 23467899999998
No 239
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.94 E-value=6e-27 Score=244.37 Aligned_cols=165 Identities=22% Similarity=0.351 Sum_probs=125.7
Q ss_pred hccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcC------C
Q 046265 464 TNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP------R 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~ 536 (639)
.++|+..+.||+|+||.||+|. ..+|+.||||++..........+.+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 3678888999999999999995 56789999999976554455567788999999999999999999999754 5
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccccc
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGIS 616 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla 616 (639)
..|+||||+ +++|.+++.. ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+|
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a 179 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179 (367)
T ss_dssp CCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC----
T ss_pred eEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccc
Confidence 679999999 7899988865 2478899999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCCcceeeeeceeeCCC
Q 046265 617 KFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 617 ~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+..... ....+||+.|+|||
T Consensus 180 ~~~~~~---~~~~~~t~~y~aPE 199 (367)
T 2fst_X 180 RHTADE---MTGYVATRWYRAPE 199 (367)
T ss_dssp --------------CCCTTCCHH
T ss_pred cccccc---CCCcCcCcCccChH
Confidence 875432 34468999999998
No 240
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=6.2e-25 Score=242.78 Aligned_cols=255 Identities=26% Similarity=0.304 Sum_probs=165.6
Q ss_pred CCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccC
Q 046265 30 SNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSM 109 (639)
Q Consensus 30 ~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~l 109 (639)
.++++|++++|.++ .+|..+. ++|++|+|++|+++ .+|. .+++|++|+|++|++++ +|. .+.
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~------- 101 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPP------- 101 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCT-------
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCC-------
Confidence 46999999999998 7788776 89999999999998 6776 57899999999999984 444 223
Q ss_pred CCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcC
Q 046265 110 PNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISN 189 (639)
Q Consensus 110 p~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 189 (639)
+| ++|+|++|++++ +|. .+++|+.|++++|++++ +|.. +++|++|++++|.+++. |. .
T Consensus 102 --------~L--~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~---~ 159 (622)
T 3g06_A 102 --------GL--LELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-PA---L 159 (622)
T ss_dssp --------TC--CEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---C
T ss_pred --------CC--CEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC---c
Confidence 23 689999999984 565 57899999999999986 6654 48999999999999853 43 2
Q ss_pred CCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCC
Q 046265 190 LSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQN 269 (639)
Q Consensus 190 l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 269 (639)
+.+|+.|+++++.+...-..+++|+.|++++|.+.+ +|.. +++|+.|++++|.++.... .+++|+.|++++|
T Consensus 160 ~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l~~----~~~~L~~L~Ls~N 231 (622)
T 3g06_A 160 PSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSLPA----LPSGLKELIVSGN 231 (622)
T ss_dssp CTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSCCC----CCTTCCEEECCSS
T ss_pred cCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccccCC----CCCCCCEEEccCC
Confidence 345666666554433222334555566666655543 3322 2455555555555554221 2345555555544
Q ss_pred cccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeC
Q 046265 270 NFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDL 349 (639)
Q Consensus 270 ~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 349 (639)
.+. .+| ..+++|+.|++++|+++ .+|. .+++|+.|++++|+++ .+|..+..+++|+.|+|
T Consensus 232 ~L~------------~lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 232 RLT------------SLP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp CCS------------CCC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred ccC------------cCC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 442 133 22345555566555554 3333 3455555555555555 44555555555555555
Q ss_pred CCC
Q 046265 350 STN 352 (639)
Q Consensus 350 s~N 352 (639)
++|
T Consensus 292 ~~N 294 (622)
T 3g06_A 292 EGN 294 (622)
T ss_dssp CSC
T ss_pred cCC
Confidence 553
No 241
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.94 E-value=4.5e-27 Score=241.58 Aligned_cols=168 Identities=24% Similarity=0.340 Sum_probs=135.8
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcE----EEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCcee
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEI----VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSF 539 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 539 (639)
++|+..+.||+|+||.||+|.. .+++. ||+|.+..... ....+.+.+|+.++++++||||+++++++. ++..+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 4677788999999999999964 44443 88888764321 222345678999999999999999999986 46689
Q ss_pred EEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 540 LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 540 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
+||||+++|+|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++.+
T Consensus 91 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence 9999999999999997643 2477788999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCC--CcceeeeeceeeCCC
Q 046265 620 KPDSS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~--~~~~~~gt~~Y~APE 639 (639)
..... ......||+.|+|||
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE 187 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALE 187 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHH
T ss_pred CcccccccccCCCCcccccChH
Confidence 54322 234467888999998
No 242
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.94 E-value=5.2e-27 Score=244.80 Aligned_cols=168 Identities=24% Similarity=0.373 Sum_probs=143.7
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.++|+..+.||+|+||.||+|... +++.||+|.+.... .....+.+.+|+.++++++||||+++++++..++..|+||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 356888899999999999999654 78999999997643 3445677899999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++|+|.+++.... .+++..+..++.+++.|++|||+.+ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 111 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred ECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999997653 4778999999999999999999842 7999999999999999999999999998765321
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
......||+.|+|||
T Consensus 186 --~~~~~~gt~~y~aPE 200 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPE 200 (360)
T ss_dssp --C----CCCCTTCCHH
T ss_pred --cccCCCCCCCeECHH
Confidence 223467999999998
No 243
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.94 E-value=1e-26 Score=233.48 Aligned_cols=167 Identities=18% Similarity=0.359 Sum_probs=142.2
Q ss_pred ccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEecc
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEY 544 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 544 (639)
++|+..+.||+|+||.||+|...+++.||||.+..... ..+.+.+|++++++++||||+++++++.. +..++||||
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 88 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc---cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence 56778899999999999999988888999999975432 35678999999999999999999999864 568999999
Q ss_pred cCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCCC
Q 046265 545 LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS 624 (639)
Q Consensus 545 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 624 (639)
+++++|.+++..... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 89 ~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 89 MENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp CTTCBHHHHTTSHHH-HTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred CCCCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 999999999975321 2478899999999999999999998 999999999999999999999999999987653321
Q ss_pred -CcceeeeeceeeCCC
Q 046265 625 -NWSEFVGTFGYVAPI 639 (639)
Q Consensus 625 -~~~~~~gt~~Y~APE 639 (639)
......|++.|+|||
T Consensus 165 ~~~~~~~~~~~y~aPE 180 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPE 180 (279)
T ss_dssp ECCTTCCCCTTTSCHH
T ss_pred ccccCCCCccCccChh
Confidence 122345788999998
No 244
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.94 E-value=7.1e-27 Score=235.27 Aligned_cols=168 Identities=26% Similarity=0.455 Sum_probs=143.9
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
.++|+..+.||+|+||.||+|... +++.||||.+..... .....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 356888899999999999999654 678899999864221 112246788999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||+++|+|.+++.... .+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||++.....
T Consensus 93 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 99999999999997653 478899999999999999999998 999999999999999999999999999876543
Q ss_pred CCCCcceeeeeceeeCCC
Q 046265 622 DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~~~~~~gt~~Y~APE 639 (639)
. ......||+.|+|||
T Consensus 167 ~--~~~~~~~~~~y~aPE 182 (284)
T 2vgo_A 167 L--RRRTMCGTLDYLPPE 182 (284)
T ss_dssp S--CBCCCCSCGGGCCHH
T ss_pred c--ccccccCCCCcCCHH
Confidence 2 223467999999998
No 245
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.94 E-value=6.5e-27 Score=241.29 Aligned_cols=172 Identities=24% Similarity=0.313 Sum_probs=144.2
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CC-----cEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCC
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SW-----EIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPR 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~-----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 536 (639)
.++|+..+.||+|+||.||+|... ++ ..||||.+.... .....+.+.+|+.+++++ +||||+++++++..++
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 356778899999999999999653 22 479999997543 334567789999999999 8999999999999999
Q ss_pred ceeEEecccCCCChhHHhhcCCC-----------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAA-----------IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD 605 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~ 605 (639)
..|+||||+++|+|.+++..... ...+++..+..++.|++.||+|||.. +|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCC
Confidence 99999999999999999875321 23478899999999999999999998 99999999999999999
Q ss_pred CceEEccccccccCCCCCCC--cceeeeeceeeCCC
Q 046265 606 YDAHVSDFGISKFLKPDSSN--WSEFVGTFGYVAPI 639 (639)
Q Consensus 606 ~~~kl~DfGla~~~~~~~~~--~~~~~gt~~Y~APE 639 (639)
+.+||+|||+++........ .....||+.|+|||
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 236 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 236 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHH
Confidence 99999999999865433221 23356888999998
No 246
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.94 E-value=1.3e-26 Score=236.84 Aligned_cols=167 Identities=28% Similarity=0.421 Sum_probs=140.8
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.+.|+..+.||+|+||.||+|... +|+.||||.+.... ..+.+.+|+.++++++||||+++++++...+..|+||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 467888899999999999999654 68999999997543 2356889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++|+|.+++.... ..+++..+..++.+++.|++|||.. +|+||||||+||+++.++.+||+|||++......
T Consensus 104 e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 104 EYCGAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp ECCTTEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred ecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 9999999999986432 3578899999999999999999998 9999999999999999999999999999876544
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
........||+.|+|||
T Consensus 179 ~~~~~~~~~~~~y~aPE 195 (314)
T 3com_A 179 MAKRNTVIGTPFWMAPE 195 (314)
T ss_dssp BSCBCCCCSCGGGCCHH
T ss_pred ccccCccCCCCCccChh
Confidence 33344568999999998
No 247
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=2e-28 Score=250.68 Aligned_cols=258 Identities=18% Similarity=0.167 Sum_probs=159.8
Q ss_pred CCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCC
Q 046265 32 LKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPN 111 (639)
Q Consensus 32 L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~ 111 (639)
++.++++.+.+...++..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..| +..+++|
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L------- 82 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTL------- 82 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTC-------
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCC-------
Confidence 4455666666654444444556677777777777765555666777777777777776665433 4443322
Q ss_pred CCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCC
Q 046265 112 SLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLS 191 (639)
Q Consensus 112 ~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 191 (639)
++|++++|++++. | ..++|++|++++|++++..+. .+++
T Consensus 83 ----------~~L~Ls~n~l~~l-~----~~~~L~~L~l~~n~l~~~~~~---~~~~----------------------- 121 (317)
T 3o53_A 83 ----------RTLDLNNNYVQEL-L----VGPSIETLHAANNNISRVSCS---RGQG----------------------- 121 (317)
T ss_dssp ----------CEEECCSSEEEEE-E----ECTTCCEEECCSSCCSEEEEC---CCSS-----------------------
T ss_pred ----------CEEECcCCccccc-c----CCCCcCEEECCCCccCCcCcc---ccCC-----------------------
Confidence 3566666665532 2 125555555555555432221 1233
Q ss_pred CCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhh-hcCCCccEEeccCCc
Q 046265 192 NLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVF-GIYPNLTFLDLSQNN 270 (639)
Q Consensus 192 ~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~ 270 (639)
|+.|++++|++.+..|..+..+++|++|++++|.+++..+..+ ..+++|++|++++|.
T Consensus 122 ---------------------L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 180 (317)
T 3o53_A 122 ---------------------KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (317)
T ss_dssp ---------------------CEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred ---------------------CCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCc
Confidence 4444555555555445555566666666677676666555554 356777777766666
Q ss_pred ccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCC
Q 046265 271 FYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLS 350 (639)
Q Consensus 271 l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls 350 (639)
+.+ +|. ...+++|+.|++++|++.+ +|..+..+++|+.|++++|+++ .+|..+..+++|+.|+++
T Consensus 181 l~~------------~~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~ 245 (317)
T 3o53_A 181 IYD------------VKG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLR 245 (317)
T ss_dssp CCE------------EEC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECT
T ss_pred Ccc------------ccc-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEcc
Confidence 531 222 2246778888888888874 4445788888888888888887 467778888888888888
Q ss_pred CCCCCcccccCChhhhccccCCeeecc
Q 046265 351 TNYNNEFRKEFPVELEKLVQLTELDLV 377 (639)
Q Consensus 351 ~N~~~~~~~~~p~~~~~l~~L~~l~l~ 377 (639)
+|++. .+.+|..+..++.|+.+++.
T Consensus 246 ~N~~~--~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 246 GNGFH--CGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp TCCCB--HHHHHHHHHTCHHHHHHHHH
T ss_pred CCCcc--CcCHHHHHhccccceEEECC
Confidence 85432 14567777888888888776
No 248
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.94 E-value=1.6e-26 Score=234.46 Aligned_cols=169 Identities=20% Similarity=0.297 Sum_probs=139.0
Q ss_pred ccCCCcceeccCCCceEEEEEcCC----CcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEc-CCcee
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPS----WEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH-PRQSF 539 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~~ 539 (639)
..|+..+.||+|+||.||+|...+ ...||||.+.... .....+.+.+|+.++++++||||++++++|.. ++..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC-CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 456778899999999999997542 2358999987533 34456778999999999999999999999754 46789
Q ss_pred EEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 540 LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 540 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
+||||+++|+|.+++.... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++.+
T Consensus 104 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp EEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred EEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccc
Confidence 9999999999999997643 3578899999999999999999998 9999999999999999999999999999876
Q ss_pred CCCC----CCcceeeeeceeeCCC
Q 046265 620 KPDS----SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~----~~~~~~~gt~~Y~APE 639 (639)
.... .......||+.|+|||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE 202 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALE 202 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHH
T ss_pred cccchhccccccCCCCCccccChH
Confidence 4322 1223456888999998
No 249
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.94 E-value=5.2e-27 Score=243.55 Aligned_cols=169 Identities=22% Similarity=0.395 Sum_probs=144.6
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCCh---------------hhHHHHHHHHHHHhccccCceeee
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDM---------------VVQQAFSNEIKALTELRHRNVVKF 528 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~---------------~~~~~~~~e~~~l~~l~H~niv~l 528 (639)
.++|...+.||+|+||.||+|.. +++.||||.+....... ...+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788889999999999999987 88999999987432111 011778999999999999999999
Q ss_pred EEEEEcCCceeEEecccCCCChhHH------hhcCCCCCCcCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeecCCCCCee
Q 046265 529 YGFSFHPRQSFLLYEYLGRGSLAII------LSNDAAIDEFSWTVRMNVIKSVANTLSYMHH-DYFPPIVHRDISSKNVL 601 (639)
Q Consensus 529 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~~~~iiHrdlk~~Nil 601 (639)
++++.+.+..|+||||+++|+|.++ +.... ...+++..+..++.|++.|++|||. . +|+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 9999999999999999999999998 54321 2468899999999999999999998 7 9999999999999
Q ss_pred eCCCCceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 602 LGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 602 l~~~~~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
++.++.+||+|||.+...... ......||+.|+|||
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE 220 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPE 220 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGG
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCch
Confidence 999999999999999876432 234467999999998
No 250
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.94 E-value=2.6e-26 Score=232.77 Aligned_cols=169 Identities=24% Similarity=0.385 Sum_probs=145.9
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCC-------hhhHHHHHHHHHHHhccc-cCceeeeEEEEEc
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPD-------MVVQQAFSNEIKALTELR-HRNVVKFYGFSFH 534 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~ 534 (639)
.++|+..+.||+|+||.||+|.. .+++.||||.+...... ....+.+.+|+.++++++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 46788889999999999999965 46899999999754311 123466789999999996 9999999999999
Q ss_pred CCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 046265 535 PRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFG 614 (639)
Q Consensus 535 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfG 614 (639)
.+..++||||+++++|.+++.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 999999999999999999997643 478899999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCCCCCcceeeeeceeeCCC
Q 046265 615 ISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 615 la~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
++....... ......||+.|+|||
T Consensus 170 ~~~~~~~~~-~~~~~~~~~~y~aPE 193 (298)
T 1phk_A 170 FSCQLDPGE-KLREVCGTPSYLAPE 193 (298)
T ss_dssp TCEECCTTC-CBCCCCSCGGGCCHH
T ss_pred chhhcCCCc-ccccccCCccccCHH
Confidence 998765432 334567999999998
No 251
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.94 E-value=1.8e-26 Score=234.82 Aligned_cols=166 Identities=24% Similarity=0.373 Sum_probs=141.7
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.++|...+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..|+||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 45788889999999999999965 478999999998543 223456889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee---CCCCceEEccccccccC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKFL 619 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill---~~~~~~kl~DfGla~~~ 619 (639)
||+++|+|.+++...+ .+++..+..++.|++.|++|||.. +|+||||||+||++ +.++.+||+|||+++..
T Consensus 86 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 86 QLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp CCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 9999999999987543 477899999999999999999998 99999999999999 78899999999999765
Q ss_pred CCCCCCcceeeeeceeeCCC
Q 046265 620 KPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~~~~~~~gt~~Y~APE 639 (639)
... .....+||+.|+|||
T Consensus 160 ~~~--~~~~~~~~~~y~aPE 177 (304)
T 2jam_A 160 QNG--IMSTACGTPGYVAPE 177 (304)
T ss_dssp CCB--TTHHHHSCCCBCCTT
T ss_pred CCC--ccccccCCCCccChH
Confidence 422 234467999999998
No 252
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=4.2e-27 Score=254.86 Aligned_cols=237 Identities=21% Similarity=0.195 Sum_probs=174.0
Q ss_pred CCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCccc
Q 046265 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGS 108 (639)
Q Consensus 29 l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~ 108 (639)
+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| |+.+++|++|+|++|.+++..+. +
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~-----~------ 99 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG-----P------ 99 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC-----T------
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC-----C------
Confidence 3489999999999998888889999999999999999986554 88999999999999998854322 2
Q ss_pred CCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCc
Q 046265 109 MPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSIS 188 (639)
Q Consensus 109 lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 188 (639)
.|++|++++|.+++..+. .+++|++|+|++|.+++..|..++.+++|+.|++++|.+++..|..+.
T Consensus 100 -----------~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 165 (487)
T 3oja_A 100 -----------SIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165 (487)
T ss_dssp -----------TCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGG
T ss_pred -----------CcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHh
Confidence 236899999999866554 457899999999999888888888889999999999988877665543
Q ss_pred CCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccC
Q 046265 189 NLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQ 268 (639)
Q Consensus 189 ~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 268 (639)
..+++|+.|++++|.+.+. |. ...+++|+.|+|++|.+++.++. +..+++|+.|++++
T Consensus 166 -------------------~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~ 223 (487)
T 3oja_A 166 -------------------ASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRN 223 (487)
T ss_dssp -------------------GGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTT
T ss_pred -------------------hhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecC
Confidence 1334555666666666554 22 23477777777777777765444 66677777777666
Q ss_pred CcccccccCcCCccccccCccccCCCCCCEEeccCCccc-ccCCccccCCCCCCeeecc
Q 046265 269 NNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIV-GELPIELGNLKSLNYRALN 326 (639)
Q Consensus 269 N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~-~~~p~~~~~l~~L~~L~l~ 326 (639)
|.+. .+|..+..+++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 224 N~l~------------~lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 224 NKLV------------LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp SCCC------------EECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CcCc------------ccchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 6552 35666666777777777777776 5556666666666666554
No 253
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=1.5e-26 Score=238.52 Aligned_cols=169 Identities=24% Similarity=0.382 Sum_probs=136.0
Q ss_pred ccCCCcceeccCCCceEEEEEcCC-----CcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCcee
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPS-----WEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSF 539 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 539 (639)
.+|...+.||+|+||.||+|.... +..||||.+.... .......+.+|+.++++++||||+++++++...+..+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 345567899999999999996542 2459999997543 3445667899999999999999999999999999999
Q ss_pred EEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 540 LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 540 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
+||||+++|+|.+++.... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 123 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 9999999999999997543 3578899999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCC---cceeeeeceeeCCC
Q 046265 620 KPDSSN---WSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~~---~~~~~gt~~Y~APE 639 (639)
...... .....+|+.|+|||
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE 220 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPE 220 (333)
T ss_dssp -------------CCCGGGSCHH
T ss_pred ccccccccccCCCCccccccCch
Confidence 533221 12245678999998
No 254
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.94 E-value=4e-27 Score=239.27 Aligned_cols=169 Identities=23% Similarity=0.360 Sum_probs=138.9
Q ss_pred hccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.+.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++..++..|+||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 467788899999999999999665 58999999987543 233567889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++++|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||++......
T Consensus 96 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 96 EFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp ECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred EeCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999886532 2478899999999999999999998 9999999999999999999999999987643211
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
........||+.|+|||
T Consensus 171 ~~~~~~~~~~~~y~aPE 187 (302)
T 2j7t_A 171 LQKRDSFIGTPYWMAPE 187 (302)
T ss_dssp HHC-----CCGGGCCHH
T ss_pred ccccccccCChhhcCCe
Confidence 11223457999999998
No 255
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=8.6e-26 Score=226.37 Aligned_cols=234 Identities=20% Similarity=0.223 Sum_probs=177.8
Q ss_pred ccceeeeE-EEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCC
Q 046265 2 SCLAFFFF-QVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSL 80 (639)
Q Consensus 2 ~~~~~~~~-~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L 80 (639)
+|.+.... .++-.+.+ ...+|..+. ++|++|+|++|.+++..+..|..+++|++|++++|++++..+..|.++++|
T Consensus 2 ~C~~~~~~~~~~c~~~~-l~~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 78 (276)
T 2z62_A 2 PCVEVVPNITYQCMELN-FYKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHL 78 (276)
T ss_dssp CSEEEETTTEEECTTSC-CSSCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTC
T ss_pred CceeccCCceEEecCCC-ccccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCC
Confidence 46554432 23344334 446787765 589999999999998777799999999999999999997777789999999
Q ss_pred CEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCC-C
Q 046265 81 KQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGS-I 159 (639)
Q Consensus 81 ~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~ 159 (639)
++|++++|++++..|..|.++++| ++|++++|++++..+..+..+++|++|++++|.+++. +
T Consensus 79 ~~L~L~~n~l~~~~~~~~~~l~~L-----------------~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l 141 (276)
T 2z62_A 79 STLILTGNPIQSLALGAFSGLSSL-----------------QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKL 141 (276)
T ss_dssp CEEECTTCCCCEECTTTTTTCTTC-----------------CEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCC
T ss_pred CEEECCCCccCccChhhhcCCccc-----------------cEEECCCCCccccCchhcccCCCCCEEECcCCccceecC
Confidence 999999999998877888777743 5899999999877776899999999999999999863 6
Q ss_pred CccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCce
Q 046265 160 PPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNI 239 (639)
Q Consensus 160 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 239 (639)
|..+..+++|+.|++++|.+++..+..+..+.+|+.+.+ .|++++|.+.+..+..+. ..+|+.
T Consensus 142 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l----------------~L~ls~n~l~~~~~~~~~-~~~L~~ 204 (276)
T 2z62_A 142 PEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL----------------SLDLSLNPMNFIQPGAFK-EIRLKE 204 (276)
T ss_dssp CGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCE----------------EEECCSSCCCEECTTSSC-SCCEEE
T ss_pred chhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccce----------------eeecCCCcccccCccccC-CCcccE
Confidence 889999999999999999998776666554444332111 677777777654444443 346777
Q ss_pred eccccccccCcchhhhhcCCCccEEeccCCccc
Q 046265 240 VHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFY 272 (639)
Q Consensus 240 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 272 (639)
|++++|.+++..+..|..+++|+.|++++|.+.
T Consensus 205 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 205 LALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp EECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred EECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 777777777766666666777777776666553
No 256
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=2.7e-26 Score=231.37 Aligned_cols=167 Identities=25% Similarity=0.323 Sum_probs=140.0
Q ss_pred cCCCcc-eeccCCCceEEEEEcC---CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 466 NFDAKY-CIGTAGQASVYKAELP---SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 466 ~f~~~~-~ig~g~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
+|.... .||+|+||.||+|... +++.||||.+.... .....+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 344444 8999999999999643 57889999998643 344567789999999999999999999999 45678999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||+++++|.+++.... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 88 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~ 162 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162 (287)
T ss_dssp EECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred EEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence 99999999999997543 3578899999999999999999998 999999999999999999999999999987653
Q ss_pred CCC---CcceeeeeceeeCCC
Q 046265 622 DSS---NWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~---~~~~~~gt~~Y~APE 639 (639)
... ......||+.|+|||
T Consensus 163 ~~~~~~~~~~~~~~~~y~aPE 183 (287)
T 1u59_A 163 DDSYYTARSAGKWPLKWYAPE 183 (287)
T ss_dssp CSCEECCCCSSCCCGGGCCHH
T ss_pred CcceeeccccccccccccCHH
Confidence 322 122345789999998
No 257
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.93 E-value=9.5e-27 Score=234.97 Aligned_cols=172 Identities=22% Similarity=0.302 Sum_probs=131.1
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.++|+..+.||+|+||.||+|.. .+++.||||++..........+.+.++...++.++||||+++++++.+++..|+||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46788889999999999999965 67899999999865433344444555666688899999999999999999999999
Q ss_pred cccCCCChhHHhhcC-CCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 543 EYLGRGSLAIILSND-AAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 543 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
||++ |++.+++... .....+++..+..++.|++.|++|||... +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9997 5887776531 12245889999999999999999999852 799999999999999999999999999987654
Q ss_pred CCCCcceeeeeceeeCCC
Q 046265 622 DSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~~~~~~gt~~Y~APE 639 (639)
.. ......||+.|+|||
T Consensus 163 ~~-~~~~~~~t~~y~aPE 179 (290)
T 3fme_A 163 DV-AKDIDAGCKPYMAPE 179 (290)
T ss_dssp --------CCCCCCSCHH
T ss_pred cc-cccccCCCccccChh
Confidence 32 223457999999998
No 258
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.93 E-value=8.8e-27 Score=259.66 Aligned_cols=162 Identities=23% Similarity=0.323 Sum_probs=134.5
Q ss_pred ceeccCCCceEEEEEc---CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEecccCC
Q 046265 471 YCIGTAGQASVYKAEL---PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGR 547 (639)
Q Consensus 471 ~~ig~g~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 547 (639)
+.||+|+||.||+|.. .+++.||||+++.........+.+.+|+.++++++|||||+++++|.. +..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999954 346789999998654444556789999999999999999999999975 568899999999
Q ss_pred CChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCCC---
Q 046265 548 GSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSS--- 624 (639)
Q Consensus 548 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~--- 624 (639)
|+|.+++.... .+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+|+.+.....
T Consensus 454 g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 454 GPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 99999997543 478899999999999999999998 999999999999999999999999999987654322
Q ss_pred CcceeeeeceeeCCC
Q 046265 625 NWSEFVGTFGYVAPI 639 (639)
Q Consensus 625 ~~~~~~gt~~Y~APE 639 (639)
......||+.|+|||
T Consensus 528 ~~~~~~~t~~y~APE 542 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPE 542 (635)
T ss_dssp -------CGGGSCHH
T ss_pred cccCCCCceeeeChh
Confidence 122345788999998
No 259
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.93 E-value=8.1e-27 Score=246.01 Aligned_cols=165 Identities=22% Similarity=0.276 Sum_probs=134.7
Q ss_pred ccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCc------e
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQ------S 538 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~------~ 538 (639)
.+|...++||+|+||.||+|+...+..||||++...... ..+|+++++.++|||||+++++|...+. .
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 457788999999999999998877777999998653311 2369999999999999999999965443 7
Q ss_pred eEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC-CCCceEEccccccc
Q 046265 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG-LDYDAHVSDFGISK 617 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~-~~~~~kl~DfGla~ 617 (639)
++||||++++.+............+++..+..++.|+++||+|||.. +|+||||||+||+++ .++.+||+|||+|+
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 89999998765544443222234688899999999999999999998 999999999999999 78999999999998
Q ss_pred cCCCCCCCcceeeeeceeeCCC
Q 046265 618 FLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~~~~~~~gt~~Y~APE 639 (639)
.+.... .....+||+.|+|||
T Consensus 191 ~~~~~~-~~~~~~~t~~y~aPE 211 (394)
T 4e7w_A 191 ILIAGE-PNVSYICSRYYRAPE 211 (394)
T ss_dssp ECCTTC-CCCSSCSCGGGCCHH
T ss_pred cccCCC-CCcccccCcCccCHH
Confidence 765432 233568999999998
No 260
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.93 E-value=1.9e-26 Score=233.07 Aligned_cols=168 Identities=23% Similarity=0.318 Sum_probs=138.0
Q ss_pred ccCCCcc-eeccCCCceEEEEEc---CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeE
Q 046265 465 NNFDAKY-CIGTAGQASVYKAEL---PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 465 ~~f~~~~-~ig~g~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 540 (639)
.+|...+ .||+|+||.||+|.. .+++.||||.+..........+.+.+|+.++++++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4566666 899999999999943 3468899999986554445567899999999999999999999999 5567899
Q ss_pred EecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCC
Q 046265 541 LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
||||+++++|.+++.... .+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 95 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 999999999999997643 478899999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC---cceeeeeceeeCCC
Q 046265 621 PDSSN---WSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~---~~~~~gt~~Y~APE 639 (639)
..... .....|++.|+|||
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE 190 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPE 190 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHH
T ss_pred cCCCcccccccCCCCceeeChH
Confidence 43321 12245678999998
No 261
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.93 E-value=3.2e-26 Score=232.06 Aligned_cols=166 Identities=21% Similarity=0.278 Sum_probs=141.9
Q ss_pred hccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 541 (639)
.++|+..+.||+|+||.||+|. ..+++.||||.+..... .+.+.+|+.+++++ +|+|++++++++......++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 3568888999999999999996 46789999999875432 23477899999998 799999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc-----eEEcccccc
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD-----AHVSDFGIS 616 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~-----~kl~DfGla 616 (639)
|||+ +++|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++. +||+|||++
T Consensus 85 ~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp EECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred EEec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 9999 999999997643 2478899999999999999999998 9999999999999987776 999999999
Q ss_pred ccCCCCCC-------CcceeeeeceeeCCC
Q 046265 617 KFLKPDSS-------NWSEFVGTFGYVAPI 639 (639)
Q Consensus 617 ~~~~~~~~-------~~~~~~gt~~Y~APE 639 (639)
+....... ......||+.|+|||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 188 (298)
T 1csn_A 159 KFYRDPVTKQHIPYREKKNLSGTARYMSIN 188 (298)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHH
T ss_pred cccccccccccccccCccCCCCCcccCCch
Confidence 87654322 124567999999998
No 262
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.93 E-value=7.5e-27 Score=243.89 Aligned_cols=170 Identities=21% Similarity=0.300 Sum_probs=136.2
Q ss_pred hccCCCcceeccCCCceEEEEEcCC------CcEEEEEEccCCCCChh---------hHHHHHHHHHHHhccccCceeee
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPS------WEIVAVKKFHSPHPDMV---------VQQAFSNEIKALTELRHRNVVKF 528 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~------~~~vavK~~~~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l 528 (639)
..+|+..+.||+|+||.||+|.... ++.||||.+........ ....+.+|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578888999999999999997654 47799999875431111 11223456667788899999999
Q ss_pred EEEEEcC----CceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC-
Q 046265 529 YGFSFHP----RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG- 603 (639)
Q Consensus 529 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~- 603 (639)
++++... ...|+||||+ +++|.+++.... ..+++..+..++.|++.||+|||.. +|+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEec
Confidence 9999865 4589999999 999999997643 3589999999999999999999999 999999999999998
Q ss_pred -CCCceEEccccccccCCCCCC-------CcceeeeeceeeCCC
Q 046265 604 -LDYDAHVSDFGISKFLKPDSS-------NWSEFVGTFGYVAPI 639 (639)
Q Consensus 604 -~~~~~kl~DfGla~~~~~~~~-------~~~~~~gt~~Y~APE 639 (639)
.++.+||+|||+|+.+..... .....+||+.|||||
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 231 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSID 231 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHH
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHH
Confidence 889999999999987643211 123456999999998
No 263
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.93 E-value=1.4e-26 Score=237.95 Aligned_cols=170 Identities=25% Similarity=0.435 Sum_probs=138.8
Q ss_pred HhccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEc------
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFH------ 534 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~------ 534 (639)
...+|+..+.||+|+||.||+|.. .+++.||||.+.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 98 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 98 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CC
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccc
Confidence 456788889999999999999965 578999999987543 2345788999999998 79999999999986
Q ss_pred CCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 046265 535 PRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFG 614 (639)
Q Consensus 535 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfG 614 (639)
.+..|+||||+++|+|.+++..... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 174 (326)
T 2x7f_A 99 DDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFG 174 (326)
T ss_dssp CCEEEEEEECCTTEEHHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCT
T ss_pred cceEEEEEEcCCCCcHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCc
Confidence 4678999999999999999976432 3578889999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCCCCCcceeeeeceeeCCC
Q 046265 615 ISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 615 la~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
++..............||+.|+|||
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE 199 (326)
T 2x7f_A 175 VSAQLDRTVGRRNTFIGTPYWMAPE 199 (326)
T ss_dssp TTC-------------CCGGGCCHH
T ss_pred CceecCcCccccccccCCccccChh
Confidence 9987654333334568999999998
No 264
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.93 E-value=4.1e-26 Score=234.92 Aligned_cols=160 Identities=20% Similarity=0.347 Sum_probs=139.4
Q ss_pred ccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc-cCceeeeEEEEEc--CCceeE
Q 046265 465 NNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR-HRNVVKFYGFSFH--PRQSFL 540 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~--~~~~~l 540 (639)
++|+..+.||+|+||.||+|. ..+++.||||.+.... .+.+.+|+.++++++ ||||+++++++.. ....++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 678888999999999999995 5678999999987432 456889999999997 9999999999998 567899
Q ss_pred EecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC-ceEEccccccccC
Q 046265 541 LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY-DAHVSDFGISKFL 619 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~-~~kl~DfGla~~~ 619 (639)
||||+++++|.+++. .+++..+..++.|++.|++|||.. +|+||||||+||+++.++ .+||+|||+|+..
T Consensus 111 v~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp EEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 999999999999885 367788999999999999999998 999999999999999776 8999999999876
Q ss_pred CCCCCCcceeeeeceeeCCC
Q 046265 620 KPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~~~~~~~gt~~Y~APE 639 (639)
.... ......||+.|+|||
T Consensus 182 ~~~~-~~~~~~~~~~y~aPE 200 (330)
T 3nsz_A 182 HPGQ-EYNVRVASRYFKGPE 200 (330)
T ss_dssp CTTC-CCCSCCSCGGGCCHH
T ss_pred CCCC-ccccccccccccChh
Confidence 5432 234467999999998
No 265
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.93 E-value=1.2e-26 Score=238.19 Aligned_cols=168 Identities=23% Similarity=0.305 Sum_probs=137.9
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC------ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP------DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 536 (639)
.++|...+.||+|+||.||+|.. .+++.||||.+..... .......+.+|+.++++++||||+++++++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 46788899999999999999965 5678999999875431 1122345789999999999999999999987655
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc---eEEccc
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD---AHVSDF 613 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~---~kl~Df 613 (639)
.|+||||+++|+|.+++.... .+++..+..++.|+++|++|||.. +|+||||||+||+++.++. +||+||
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred -eEEEEecCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 899999999999999887543 478899999999999999999998 9999999999999987654 999999
Q ss_pred cccccCCCCCCCcceeeeeceeeCCC
Q 046265 614 GISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 614 Gla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
|+++..... .......||+.|+|||
T Consensus 162 g~~~~~~~~-~~~~~~~gt~~y~aPE 186 (322)
T 2ycf_A 162 GHSKILGET-SLMRTLCGTPTYLAPE 186 (322)
T ss_dssp TTCEECCCC-HHHHHHHSCCTTCCHH
T ss_pred ccceecccc-cccccccCCcCccCch
Confidence 999876432 1223467999999998
No 266
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.93 E-value=7.9e-27 Score=237.08 Aligned_cols=172 Identities=27% Similarity=0.440 Sum_probs=127.5
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.++|+..+.||+|+||.||+|.. .+++.||||.+..... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 46788899999999999999965 4678999999875432 223456889999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcC-----CCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 543 EYLGRGSLAIILSND-----AAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 543 e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
||+++|+|.+++... .....+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999998631 1224588999999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCCC-----CcceeeeeceeeCCC
Q 046265 618 FLKPDSS-----NWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~-----~~~~~~gt~~Y~APE 639 (639)
....... ......||+.|+|||
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE 196 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPE 196 (303)
T ss_dssp HCC---------------CCCTTCCHH
T ss_pred eeccCCCccchhhhcccCCCccccCHH
Confidence 6643211 123467999999998
No 267
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.93 E-value=4.2e-26 Score=236.08 Aligned_cols=165 Identities=26% Similarity=0.343 Sum_probs=141.3
Q ss_pred HHhccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhc--cccCceeeeEEEEEcCC---
Q 046265 462 RATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTE--LRHRNVVKFYGFSFHPR--- 536 (639)
Q Consensus 462 ~~~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~--- 536 (639)
...++|+..+.||+|+||.||+|.. +++.||||.+... ....+.+|++++.. ++||||+++++++...+
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred cccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 3457899999999999999999987 4799999998642 34567788888877 78999999999998876
Q ss_pred -ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEeecCCCCCeeeCCCCc
Q 046265 537 -QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH--------HDYFPPIVHRDISSKNVLLGLDYD 607 (639)
Q Consensus 537 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH--------~~~~~~iiHrdlk~~Nill~~~~~ 607 (639)
..|+||||+++|+|.+++... .+++..+..++.|++.|++||| .. +|+||||||+||+++.++.
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~ 185 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT 185 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSC
T ss_pred ceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCC
Confidence 789999999999999999753 4788999999999999999999 55 8999999999999999999
Q ss_pred eEEccccccccCCCCCC----CcceeeeeceeeCCC
Q 046265 608 AHVSDFGISKFLKPDSS----NWSEFVGTFGYVAPI 639 (639)
Q Consensus 608 ~kl~DfGla~~~~~~~~----~~~~~~gt~~Y~APE 639 (639)
+||+|||+++....... ......||+.|+|||
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 221 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHH
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHh
Confidence 99999999987654322 123457999999998
No 268
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.93 E-value=1.9e-26 Score=256.42 Aligned_cols=161 Identities=24% Similarity=0.322 Sum_probs=133.1
Q ss_pred eeccCCCceEEEEEcC---CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEecccCCC
Q 046265 472 CIGTAGQASVYKAELP---SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYEYLGRG 548 (639)
Q Consensus 472 ~ig~g~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 548 (639)
.||+|+||.||+|..+ ++..||||.++... .....+.|.+|+.++++++|||||+++++|.. +..|+|||||++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 7999999999999653 45679999998643 23346779999999999999999999999976 5689999999999
Q ss_pred ChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCCCC---
Q 046265 549 SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSN--- 625 (639)
Q Consensus 549 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~--- 625 (639)
+|.+++.... ..+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+|+.+......
T Consensus 421 ~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 421 PLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp BHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred cHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 9999997543 3588999999999999999999998 9999999999999999999999999999876533221
Q ss_pred cceeeeeceeeCCC
Q 046265 626 WSEFVGTFGYVAPI 639 (639)
Q Consensus 626 ~~~~~gt~~Y~APE 639 (639)
.....+++.|||||
T Consensus 496 ~~~~~~~~~y~APE 509 (613)
T 2ozo_A 496 RSAGKWPLKWYAPE 509 (613)
T ss_dssp ------CCTTSCHH
T ss_pred ccCCCCccceeCHh
Confidence 12234668999998
No 269
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.93 E-value=3.5e-26 Score=235.04 Aligned_cols=169 Identities=24% Similarity=0.379 Sum_probs=142.3
Q ss_pred hccCCCcceeccCCCceEEEEEc-----CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC--
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-----PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR-- 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-- 536 (639)
..+|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC--SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 34577788999999999999973 468899999997632 344567899999999999999999999987654
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccccc
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGIS 616 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla 616 (639)
..++||||+++|+|.+++.... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||++
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred ceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcch
Confidence 7899999999999999997653 2478899999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCC---cceeeeeceeeCCC
Q 046265 617 KFLKPDSSN---WSEFVGTFGYVAPI 639 (639)
Q Consensus 617 ~~~~~~~~~---~~~~~gt~~Y~APE 639 (639)
+........ .....++..|+|||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE 218 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPE 218 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHH
T ss_pred hhccccccccccccCCCCceeEECch
Confidence 876543221 12345778899998
No 270
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.93 E-value=1.9e-26 Score=237.15 Aligned_cols=172 Identities=23% Similarity=0.346 Sum_probs=140.1
Q ss_pred hccCCCcceeccCCCceEEEEEc------CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCc
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL------PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQ 537 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 537 (639)
..+|+..+.||+|+||.||+|.. .+++.||||.+.... .......+.+|+.++++++||||+++++++...+.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 36788889999999999999974 356789999997543 33455678999999999999999999999999999
Q ss_pred eeEEecccCCCChhHHhhcCCC----CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC---CCceEE
Q 046265 538 SFLLYEYLGRGSLAIILSNDAA----IDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL---DYDAHV 610 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~---~~~~kl 610 (639)
.|+||||+++|+|.+++..... ...+++..+..++.|++.|++|||.. +|+||||||+||+++. ...+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999976432 13588999999999999999999998 9999999999999984 446999
Q ss_pred ccccccccCCCCC--CCcceeeeeceeeCCC
Q 046265 611 SDFGISKFLKPDS--SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 611 ~DfGla~~~~~~~--~~~~~~~gt~~Y~APE 639 (639)
+|||+++...... .......||+.|+|||
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 215 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPE 215 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHH
T ss_pred CccccccccccccccccCCCcCCCcceeCHh
Confidence 9999998653222 1123356889999998
No 271
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=3.7e-26 Score=231.58 Aligned_cols=167 Identities=21% Similarity=0.299 Sum_probs=139.1
Q ss_pred CCCcceeccCCCceEEEEEcC-CC---cEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCce-eEE
Q 046265 467 FDAKYCIGTAGQASVYKAELP-SW---EIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS-FLL 541 (639)
Q Consensus 467 f~~~~~ig~g~~g~vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~-~lv 541 (639)
|...+.||+|+||.||+|... ++ ..||||.+.... .....+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc-cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 445688999999999999643 22 379999987533 344567789999999999999999999999876655 999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||+.+|+|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILD 176 (298)
T ss_dssp ECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred EecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence 99999999999997643 3578899999999999999999999 999999999999999999999999999986543
Q ss_pred CC----CCcceeeeeceeeCCC
Q 046265 622 DS----SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~----~~~~~~~gt~~Y~APE 639 (639)
.. .......||+.|+|||
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE 198 (298)
T 3pls_A 177 REYYSVQQHRHARLPVKWTALE 198 (298)
T ss_dssp GGGGCSCCSSCTTCGGGGSCHH
T ss_pred CcccccccCcCCCCCccccChh
Confidence 21 1223456889999998
No 272
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.93 E-value=2.5e-26 Score=236.30 Aligned_cols=170 Identities=23% Similarity=0.346 Sum_probs=138.8
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcE--EEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCceeE
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEI--VAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~--vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 540 (639)
++|+..+.||+|+||.||+|+. .++.. ||||.+.... .....+.+.+|+++++++ +||||+++++++.+.+..|+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 5778889999999999999965 45554 5999987532 223445688999999999 89999999999999999999
Q ss_pred EecccCCCChhHHhhcCC-------------CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc
Q 046265 541 LYEYLGRGSLAIILSNDA-------------AIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD 607 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~ 607 (639)
||||+++|+|.+++.... ....+++..+..++.|+++|++|||.. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999997653 123588999999999999999999998 9999999999999999999
Q ss_pred eEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 608 AHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 608 ~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+||+|||+++...... ......+++.|+|||
T Consensus 181 ~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE 211 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYV-KKTMGRLPVRWMAIE 211 (327)
T ss_dssp EEECCTTCEESSCEEC-CC----CCTTTCCHH
T ss_pred EEEcccCcCccccccc-cccCCCCCccccChh
Confidence 9999999998543221 123346788999998
No 273
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.93 E-value=7.1e-27 Score=256.07 Aligned_cols=168 Identities=20% Similarity=0.388 Sum_probs=142.2
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
.++|+..+.||+|+||.||+|...++..||||+++.... ..+.|.+|++++++++|||||++++++.+ +..|+|||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 356777889999999999999988888899999985432 34678999999999999999999999876 67899999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCCC
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPDS 623 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~ 623 (639)
|+++|+|.++++.... ..+++..+..++.|+++||+|||.. +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 342 ~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp CCTTEEHHHHHSHHHH-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred hhcCCcHHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 9999999999974321 2478899999999999999999998 99999999999999999999999999998764321
Q ss_pred -CCcceeeeeceeeCCC
Q 046265 624 -SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 624 -~~~~~~~gt~~Y~APE 639 (639)
.......++..|||||
T Consensus 418 ~~~~~~~~~~~~y~aPE 434 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPE 434 (535)
T ss_dssp HHTTCSTTSCGGGSCHH
T ss_pred eecccCCcCcccccCHH
Confidence 1112235678999998
No 274
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.93 E-value=2.1e-26 Score=241.05 Aligned_cols=164 Identities=24% Similarity=0.367 Sum_probs=138.3
Q ss_pred hccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCce----
Q 046265 464 TNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS---- 538 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~---- 538 (639)
.++|...+.||+|+||.||+|. ..+|+.||||++..........+.+.+|+.++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 3567788999999999999995 45789999999987655555567889999999999999999999999877654
Q ss_pred --eEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccccc
Q 046265 539 --FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGIS 616 (639)
Q Consensus 539 --~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla 616 (639)
|+||||++ |+|.+.+.. .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a 191 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 191 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred eEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence 99999997 688877743 378899999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCcceeeeeceeeCCC
Q 046265 617 KFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 617 ~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+..... ....+||+.|+|||
T Consensus 192 ~~~~~~---~~~~~~t~~y~aPE 211 (371)
T 4exu_A 192 RHADAE---MTGYVVTRWYRAPE 211 (371)
T ss_dssp -----------CTTCCCTTSCHH
T ss_pred cccccC---cCCcccCccccCHH
Confidence 865432 23457899999998
No 275
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.93 E-value=1.6e-26 Score=239.13 Aligned_cols=171 Identities=22% Similarity=0.320 Sum_probs=139.3
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHH-HhccccCceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKA-LTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
.++|+..+.||+|+||.||+|.. .+|+.||||++....... ....+..|+.+ ++.++||||+++++++..++..|+|
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ-EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCH-HHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcH-HHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 35677788999999999999964 678999999998654333 33445555555 7778999999999999999999999
Q ss_pred ecccCCCChhHHhhcCC-CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCC
Q 046265 542 YEYLGRGSLAIILSNDA-AIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
|||+++ +|.+++.... ....+++..+..++.|++.||+|||... +|+||||||+||+++.++.+||+|||+++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 999975 8988876421 2245889999999999999999999742 89999999999999999999999999998764
Q ss_pred CCCCCcceeeeeceeeCCC
Q 046265 621 PDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~~~~~~gt~~Y~APE 639 (639)
.. ......+||+.|+|||
T Consensus 206 ~~-~~~~~~~gt~~y~aPE 223 (340)
T 3an0_A 206 DS-VAKTIDAGCKPYMAPE 223 (340)
T ss_dssp CH-HHHHHSSCCCCCCCHH
T ss_pred cc-cccccCCCCccccCcc
Confidence 32 1122357999999998
No 276
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.93 E-value=3.7e-26 Score=229.65 Aligned_cols=169 Identities=19% Similarity=0.294 Sum_probs=139.0
Q ss_pred hccCCCcceeccCCCceEEEEEcCC----CcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCcee
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPS----WEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSF 539 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 539 (639)
.++|...+.||+|+||.||+|.... +..||||.+.... .....+.+.+|+.++++++||||+++++++.+ +..|
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 4677888999999999999996432 3469999987643 33456778999999999999999999999865 4578
Q ss_pred EEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 540 LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 540 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
+||||+++++|.+++.... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 89 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred EEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 9999999999999997543 2478899999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCC-CcceeeeeceeeCCC
Q 046265 620 KPDSS-NWSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~-~~~~~~gt~~Y~APE 639 (639)
..... ......||+.|+|||
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE 184 (281)
T 3cc6_A 164 EDEDYYKASVTRLPIKWMSPE 184 (281)
T ss_dssp ---------CCCCCGGGCCHH
T ss_pred ccccccccccCCCCcceeCch
Confidence 54322 223356788999998
No 277
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.93 E-value=2.9e-26 Score=236.61 Aligned_cols=169 Identities=22% Similarity=0.262 Sum_probs=129.3
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc-cCceeeeEEEEEc--------
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR-HRNVVKFYGFSFH-------- 534 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~-------- 534 (639)
.+|+..+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.++.++. ||||+++++++..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 4677889999999999999964 57899999998643 2445567899999999996 9999999999952
Q ss_pred CCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeecCCCCCeeeCCCCceEEcc
Q 046265 535 PRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPP--IVHRDISSKNVLLGLDYDAHVSD 612 (639)
Q Consensus 535 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--iiHrdlk~~Nill~~~~~~kl~D 612 (639)
....++||||++ |+|.+++........+++..+..++.|++.|++|||.. + |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 334789999996 79988886533334589999999999999999999988 6 99999999999999999999999
Q ss_pred ccccccCCCCCCC------------cceeeeeceeeCCC
Q 046265 613 FGISKFLKPDSSN------------WSEFVGTFGYVAPI 639 (639)
Q Consensus 613 fGla~~~~~~~~~------------~~~~~gt~~Y~APE 639 (639)
||+++........ .....||+.|+|||
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE 220 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPE 220 (337)
T ss_dssp CTTCBCCSSCC----------------------------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChh
Confidence 9999876532211 11356999999998
No 278
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.93 E-value=2.6e-26 Score=259.28 Aligned_cols=161 Identities=23% Similarity=0.360 Sum_probs=138.4
Q ss_pred ccCCCcceeccCCCceEEEEEcC--CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCc-----
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP--SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQ----- 537 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~----- 537 (639)
++|+..+.||+|+||.||+|... +++.||||.+.... .......+.+|+.++++++|||||++++++...+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 67888999999999999999764 68999999987533 34456678999999999999999999999987665
Q ss_pred eeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 538 SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
.|+||||+++++|.+++.. .++|..+..++.|+++||+|+|.. +|+||||||+||+++.+ .+||+|||+++
T Consensus 159 ~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred eEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccch
Confidence 6999999999999987654 488999999999999999999998 99999999999999875 89999999998
Q ss_pred cCCCCCCCcceeeeeceeeCCC
Q 046265 618 FLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~~~~~~~gt~~Y~APE 639 (639)
..... ...+||++|||||
T Consensus 230 ~~~~~----~~~~gt~~y~aPE 247 (681)
T 2pzi_A 230 RINSF----GYLYGTPGFQAPE 247 (681)
T ss_dssp ETTCC----SCCCCCTTTSCTT
T ss_pred hcccC----CccCCCccccCHH
Confidence 76533 3467999999999
No 279
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.93 E-value=1.8e-26 Score=238.20 Aligned_cols=166 Identities=33% Similarity=0.445 Sum_probs=132.1
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHH--HhccccCceeeeEEEEEc-----CC
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKA--LTELRHRNVVKFYGFSFH-----PR 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~--l~~l~H~niv~l~~~~~~-----~~ 536 (639)
.++|+..+.||+|+||.||+|+. +++.||||++... ....+..|.++ +..++||||+++++++.. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA-----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 35778889999999999999976 5789999998642 23334444444 556899999999986542 22
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCC------CCCeEeecCCCCCeeeCCCCceEE
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDY------FPPIVHRDISSKNVLLGLDYDAHV 610 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~------~~~iiHrdlk~~Nill~~~~~~kl 610 (639)
..|+||||+++|+|.+++.... .+|..+..++.|+++||+|||..+ .++|+||||||+||+++.++.+||
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred eEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 5689999999999999997543 478899999999999999999863 338999999999999999999999
Q ss_pred ccccccccCCCCC--------CCcceeeeeceeeCCC
Q 046265 611 SDFGISKFLKPDS--------SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 611 ~DfGla~~~~~~~--------~~~~~~~gt~~Y~APE 639 (639)
+|||+|+.+.... ......+||+.|+|||
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 198 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE 198 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHH
T ss_pred eeccceeecccccccCccccccccccCCCccceeCch
Confidence 9999998764321 1122357999999998
No 280
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.93 E-value=3.5e-26 Score=238.81 Aligned_cols=167 Identities=25% Similarity=0.358 Sum_probs=141.9
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcC-----Cc
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP-----RQ 537 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 537 (639)
..+|+..+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.++++++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 45788889999999999999964 578899999997533 334457789999999999999999999999765 36
Q ss_pred eeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 538 SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
.|+||||++ |+|.+++... .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 899999997 5899888653 478899999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCC---CcceeeeeceeeCCC
Q 046265 618 FLKPDSS---NWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~---~~~~~~gt~~Y~APE 639 (639)
....... .....+||+.|+|||
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE 201 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPE 201 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHH
T ss_pred ecCCCCCccccccccccccCCCCCH
Confidence 7653221 124468999999998
No 281
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.93 E-value=2.5e-26 Score=241.60 Aligned_cols=167 Identities=21% Similarity=0.295 Sum_probs=135.4
Q ss_pred HHhccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcC-----
Q 046265 462 RATNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP----- 535 (639)
Q Consensus 462 ~~~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~----- 535 (639)
...++|+..+.||+|+||.||+|. ..+++.||||++...... ..+|+.+++.++|||||++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY------KNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS------CCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch------HHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 345788899999999999999995 567899999998753211 24699999999999999999998543
Q ss_pred ---------------------------------CceeEEecccCCCChhHHhhcC-CCCCCcCHHHHHHHHHHHHHHHHH
Q 046265 536 ---------------------------------RQSFLLYEYLGRGSLAIILSND-AAIDEFSWTVRMNVIKSVANTLSY 581 (639)
Q Consensus 536 ---------------------------------~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~ 581 (639)
...++||||++ |+|.+.+... .....+++..+..++.|+++||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 23789999998 5777776531 122358889999999999999999
Q ss_pred HHhCCCCCeEeecCCCCCeeeC-CCCceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 582 MHHDYFPPIVHRDISSKNVLLG-LDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 582 lH~~~~~~iiHrdlk~~Nill~-~~~~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
||.. +|+||||||+||+++ .++.+||+|||+|+.+.... .....+||+.|+|||
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE 211 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPE 211 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHH
Confidence 9998 999999999999998 68899999999998765433 234467899999998
No 282
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.93 E-value=2.4e-26 Score=235.27 Aligned_cols=171 Identities=18% Similarity=0.243 Sum_probs=140.9
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEc----CCce
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH----PRQS 538 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~ 538 (639)
.++|+..+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.++++++||||+++++++.. ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 35688889999999999999965 67899999998653 24456778999999999999999999999973 3478
Q ss_pred eEEecccCCCChhHHhhcCC-CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 539 FLLYEYLGRGSLAIILSNDA-AIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
|+||||+++|+|.+++.... ....+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||++.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 99999999999999987521 124588999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCC---------cceeeeeceeeCCC
Q 046265 618 FLKPDSSN---------WSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~~---------~~~~~gt~~Y~APE 639 (639)
........ .....||+.|+|||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 213 (317)
T 2buj_A 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPE 213 (317)
T ss_dssp ESCEEEESHHHHHHHHHHHHHHSCGGGCCGG
T ss_pred hcccccccccccccccccccccCCcccCCHh
Confidence 65321110 12346799999998
No 283
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.93 E-value=1.7e-26 Score=239.35 Aligned_cols=168 Identities=21% Similarity=0.272 Sum_probs=134.2
Q ss_pred ccCCCcceeccCCCceEEEEEcC----CCcEEEEEEccCCCCChh---------hHHHHHHHHHHHhccccCceeeeEEE
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP----SWEIVAVKKFHSPHPDMV---------VQQAFSNEIKALTELRHRNVVKFYGF 531 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~~~ 531 (639)
++|...+.||+|+||.||+|... ++..||||.......... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56778899999999999999765 568899999876432111 12346788899999999999999999
Q ss_pred EEc----CCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC-
Q 046265 532 SFH----PRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY- 606 (639)
Q Consensus 532 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~- 606 (639)
+.. ....|+||||+ +++|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSST
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCC
Confidence 987 67899999999 999999997654 578899999999999999999998 999999999999998877
Q ss_pred -ceEEccccccccCCCCC-------CCcceeeeeceeeCCC
Q 046265 607 -DAHVSDFGISKFLKPDS-------SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 607 -~~kl~DfGla~~~~~~~-------~~~~~~~gt~~Y~APE 639 (639)
.+||+|||+|+.+.... .......||+.|+|||
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 230 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLD 230 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHH
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHH
Confidence 99999999998764321 1124468999999998
No 284
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.93 E-value=1.9e-26 Score=245.26 Aligned_cols=164 Identities=25% Similarity=0.337 Sum_probs=131.9
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC------c
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR------Q 537 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~ 537 (639)
.+|+..++||+|+||.||+|.. .+++.||||++..... .+.+|++++++++|||||+++++|...+ .
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 4577788999999999999976 4689999999875321 1346999999999999999999986421 3
Q ss_pred eeEEecccCCCChhHHhhc-CCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC-CceEEccccc
Q 046265 538 SFLLYEYLGRGSLAIILSN-DAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD-YDAHVSDFGI 615 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~-~~~kl~DfGl 615 (639)
.++||||+++ ++.+.+.. ......+++..+..++.|+++||+|||.. +|+||||||+|||++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 6789999986 55555432 11224688899999999999999999998 99999999999999965 5789999999
Q ss_pred cccCCCCCCCcceeeeeceeeCCC
Q 046265 616 SKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 616 a~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
|+.+.... .....+||+.|+|||
T Consensus 204 a~~~~~~~-~~~~~~~t~~y~aPE 226 (420)
T 1j1b_A 204 AKQLVRGE-PNVSYICSRYYRAPE 226 (420)
T ss_dssp CEECCTTC-CCCSCCSCTTSCCHH
T ss_pred hhhcccCC-CceeeeeCCCcCCHH
Confidence 99765332 233468999999998
No 285
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.93 E-value=4.4e-26 Score=237.02 Aligned_cols=163 Identities=23% Similarity=0.358 Sum_probs=137.4
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCc------
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQ------ 537 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~------ 537 (639)
.+|...+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 5677889999999999999965 578999999998655455556778999999999999999999999987654
Q ss_pred eeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 538 SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
.|+||||++ |+|.+++.. .+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 174 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLAR 174 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred EEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccccc
Confidence 499999997 688877643 378899999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCCCCcceeeeeceeeCCC
Q 046265 618 FLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~~~~~~~gt~~Y~APE 639 (639)
..... ....+||+.|+|||
T Consensus 175 ~~~~~---~~~~~~t~~y~aPE 193 (353)
T 3coi_A 175 HADAE---MTGYVVTRWYRAPE 193 (353)
T ss_dssp C-----------CCSBCCSCHH
T ss_pred CCCCC---ccccccCcCcCCHH
Confidence 65422 23467999999998
No 286
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.93 E-value=3.1e-26 Score=235.44 Aligned_cols=169 Identities=20% Similarity=0.335 Sum_probs=133.6
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcE----EEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCce
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEI----VAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQS 538 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 538 (639)
..+|+..+.||+|+||.||+|.. .+++. ||+|.+.... .....+.+.+|+.++++++||||++++++|..+. .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 35677889999999999999964 44443 5788776433 2334567899999999999999999999998754 7
Q ss_pred eEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccccccc
Q 046265 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKF 618 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~ 618 (639)
++|+||+++|+|.+++.... ..+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+++.
T Consensus 92 ~~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred eEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 89999999999999997643 3578899999999999999999998 999999999999999999999999999987
Q ss_pred CCCCCC--CcceeeeeceeeCCC
Q 046265 619 LKPDSS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 619 ~~~~~~--~~~~~~gt~~Y~APE 639 (639)
...... ......||+.|+|||
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE 189 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALE 189 (327)
T ss_dssp -------------CCCGGGSCHH
T ss_pred ccCccccccccCCCccccccCHH
Confidence 643322 223346788999998
No 287
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.93 E-value=3.3e-26 Score=238.68 Aligned_cols=175 Identities=19% Similarity=0.209 Sum_probs=128.8
Q ss_pred HHHHHHhccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCC
Q 046265 458 EEVIRATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPR 536 (639)
Q Consensus 458 ~~~~~~~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 536 (639)
++.....++|+..+.||+|+||.||+|.. .+++.||||++..... ....+.+|+..++.++||||++++++|...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~ 92 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR---FRNRELQIMQDLAVLHHPNIVQLQSYFYTLG 92 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT---CCCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc---ccHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence 34556678999999999999999999965 5689999999865321 2234567888888999999999999997644
Q ss_pred c-------eeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHH--hCCCCCeEeecCCCCCeeeCC-CC
Q 046265 537 Q-------SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH--HDYFPPIVHRDISSKNVLLGL-DY 606 (639)
Q Consensus 537 ~-------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH--~~~~~~iiHrdlk~~Nill~~-~~ 606 (639)
. .++||||++++.+..+.........+++..+..++.|++.|++|+| .. +|+||||||+||+++. ++
T Consensus 93 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 93 ERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred cccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence 3 7899999986533333222222345788899999999999999999 66 9999999999999996 89
Q ss_pred ceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 607 DAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 607 ~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
.+||+|||+++.+.... .....+||+.|+|||
T Consensus 170 ~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE 201 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSE-PNVAYICSRYYRAPE 201 (360)
T ss_dssp EEEECCCTTCBCCCTTS-CCCSTTSCGGGCCHH
T ss_pred cEEEeeCCCceecCCCC-CcccccCCcceeCHH
Confidence 99999999998765432 223467899999998
No 288
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.93 E-value=4.7e-26 Score=229.67 Aligned_cols=170 Identities=24% Similarity=0.375 Sum_probs=145.6
Q ss_pred HhccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
..++|+..+.||+|+||.||+|... +++.||||.+..........+.+.+|+.++++++||||+++++++...+..|+|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3567888999999999999999654 789999999875443334467789999999999999999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC---CceEEcccccccc
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD---YDAHVSDFGISKF 618 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~---~~~kl~DfGla~~ 618 (639)
|||+++++|.+.+.... .+++..+..++.|++.|++|||.. +|+||||||+||+++.+ +.+||+|||+++.
T Consensus 100 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 99999999998886543 478899999999999999999998 99999999999999754 4799999999987
Q ss_pred CCCCCCCcceeeeeceeeCCC
Q 046265 619 LKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 619 ~~~~~~~~~~~~gt~~Y~APE 639 (639)
..... ......||+.|+|||
T Consensus 174 ~~~~~-~~~~~~~~~~y~aPE 193 (287)
T 2wei_A 174 FQQNT-KMKDRIGTAYYIAPE 193 (287)
T ss_dssp BCCCS-SCSCHHHHHTTCCHH
T ss_pred ecCCC-ccccccCcccccChH
Confidence 65432 233457999999998
No 289
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.93 E-value=9e-26 Score=240.58 Aligned_cols=165 Identities=22% Similarity=0.284 Sum_probs=140.0
Q ss_pred hccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc------ccCceeeeEEEEEcCC
Q 046265 464 TNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL------RHRNVVKFYGFSFHPR 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l------~H~niv~l~~~~~~~~ 536 (639)
..+|+..+.||+|+||.||+|. ..+++.||||++... ....+.+.+|+++++.+ .|+||+++++++...+
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 3568888999999999999995 456899999999752 33456677888888877 5679999999999999
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc--eEEcccc
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD--AHVSDFG 614 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~--~kl~DfG 614 (639)
..++||||++ ++|.+++..... ..+++..+..++.|++.||+|||.. +|+||||||+|||++.++. +||+|||
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKNKF-QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred eEEEEEeccC-CCHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecc
Confidence 9999999996 689988876432 3488999999999999999999999 9999999999999999887 9999999
Q ss_pred ccccCCCCCCCcceeeeeceeeCCC
Q 046265 615 ISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 615 la~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+|+..... ....+||+.|||||
T Consensus 248 ~a~~~~~~---~~~~~gt~~y~aPE 269 (429)
T 3kvw_A 248 SSCYEHQR---VYTYIQSRFYRAPE 269 (429)
T ss_dssp TCEETTCC---CCSSCSCGGGCCHH
T ss_pred cceecCCc---ccccCCCCCccChH
Confidence 99765432 23468999999998
No 290
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.93 E-value=6.8e-26 Score=235.61 Aligned_cols=167 Identities=25% Similarity=0.408 Sum_probs=140.0
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcC-----Cc
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP-----RQ 537 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 537 (639)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... .......+.+|+.++++++||||+++++++..+ ..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 46788889999999999999965 478999999996432 344456788999999999999999999998764 57
Q ss_pred eeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 538 SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
.|+||||++ |+|.+++... .+++..+..++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 899999997 6899888753 478899999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCCC----------CcceeeeeceeeCCC
Q 046265 618 FLKPDSS----------NWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~----------~~~~~~gt~~Y~APE 639 (639)
.+..... .....+||+.|+|||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 192 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHH
T ss_pred ccccccccccCccccccchhhccccccccCCe
Confidence 7643211 122357899999998
No 291
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.93 E-value=4.5e-26 Score=231.84 Aligned_cols=171 Identities=20% Similarity=0.296 Sum_probs=139.7
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC--ChhhHHHHHHHHHHHhccccCceeeeEEEEE--cCCce
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP--DMVVQQAFSNEIKALTELRHRNVVKFYGFSF--HPRQS 538 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~ 538 (639)
.++|...+.||+|+||.||+|.. .+++.||||.+..... .....+.+.+|+.++++++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46789999999999999999975 5678999999875321 1234567899999999999999999999985 34578
Q ss_pred eEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccccccc
Q 046265 539 FLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKF 618 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~ 618 (639)
|+||||+++| +.+++..... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPE-KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTT-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhCcc-cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999877 6666654322 4588899999999999999999998 999999999999999999999999999987
Q ss_pred CCCCCC--CcceeeeeceeeCCC
Q 046265 619 LKPDSS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 619 ~~~~~~--~~~~~~gt~~Y~APE 639 (639)
...... ......||+.|+|||
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE 181 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPE 181 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHH
T ss_pred cCccccccccccCCCCCCCcChh
Confidence 653221 223457999999998
No 292
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.93 E-value=7.1e-26 Score=231.37 Aligned_cols=168 Identities=23% Similarity=0.359 Sum_probs=140.2
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcccc--CceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRH--RNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~~~~~~~~~~~lv 541 (639)
..+|+..+.||+|+||.||+|...+++.||||.+..........+.+.+|+.++.+++| |||+++++++..++..|+|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 45677889999999999999988889999999998655555566788999999999974 9999999999999999999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|| +.+++|.+++.... .+++..+..++.|+++|++|||.. +|+||||||+||++++ +.+||+|||+++.+..
T Consensus 107 ~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred Ee-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 99 56889999997653 477889999999999999999998 9999999999999964 8999999999987654
Q ss_pred CCC--CcceeeeeceeeCCC
Q 046265 622 DSS--NWSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~--~~~~~~gt~~Y~APE 639 (639)
... .....+||+.|+|||
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE 198 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPE 198 (313)
T ss_dssp -----------CCGGGCCHH
T ss_pred ccccccccCCCCCCCcCCHH
Confidence 322 123457999999998
No 293
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.93 E-value=1.8e-26 Score=241.71 Aligned_cols=166 Identities=10% Similarity=0.031 Sum_probs=122.1
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhcc--ccCceeeeE-------EEEE
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTEL--RHRNVVKFY-------GFSF 533 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l--~H~niv~l~-------~~~~ 533 (639)
.+|+..+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.++..+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 4577789999999999999964 5789999999987553 334456677885544444 699988755 4443
Q ss_pred cC-----------------CceeEEecccCCCChhHHhhcCCCCCCcCHHHH------HHHHHHHHHHHHHHHhCCCCCe
Q 046265 534 HP-----------------RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVR------MNVIKSVANTLSYMHHDYFPPI 590 (639)
Q Consensus 534 ~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~------~~i~~~i~~~l~~lH~~~~~~i 590 (639)
.+ ...|+||||++ |+|.+++..... .+++..+ ..++.|+++||+|||.. +|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~i 215 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSK---GL 215 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CC
Confidence 33 23799999998 899999976422 1233445 67789999999999998 99
Q ss_pred EeecCCCCCeeeCCCCceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 591 iHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+||||||+|||++.++.+||+|||+|+..... .....||+.|+|||
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE 261 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPRE 261 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCHH
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcChh
Confidence 99999999999999999999999999876422 22356779999998
No 294
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.93 E-value=2.6e-26 Score=235.94 Aligned_cols=171 Identities=21% Similarity=0.331 Sum_probs=140.3
Q ss_pred HhccCCCcceeccCCCceEEEEEc--CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc---ccCceeeeEEEEE----
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAEL--PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL---RHRNVVKFYGFSF---- 533 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~H~niv~l~~~~~---- 533 (639)
+.++|+..+.||+|+||.||+|.. .+++.||||++............+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457888899999999999999976 4678999999875432222233466787777766 8999999999997
Q ss_pred -cCCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 046265 534 -HPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSD 612 (639)
Q Consensus 534 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~D 612 (639)
.....++||||++ |+|.+++..... ..+++..+..++.|++.|++|||.. +|+||||||+||+++.++.+||+|
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECS
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEec
Confidence 4567899999998 699999875432 3478899999999999999999998 999999999999999999999999
Q ss_pred ccccccCCCCCCCcceeeeeceeeCCC
Q 046265 613 FGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 613 fGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
||+++..... .......||+.|+|||
T Consensus 164 fg~~~~~~~~-~~~~~~~~~~~y~aPE 189 (326)
T 1blx_A 164 FGLARIYSFQ-MALTSVVVTLWYRAPE 189 (326)
T ss_dssp CCSCCCCCGG-GGGCCCCCCCTTCCHH
T ss_pred CcccccccCC-CCccccccccceeCHH
Confidence 9999876432 2233467999999998
No 295
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.93 E-value=2.9e-26 Score=230.00 Aligned_cols=164 Identities=26% Similarity=0.368 Sum_probs=132.7
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcC-CceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHP-RQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-~~~~lv~ 542 (639)
.++|+..+.||+|+||.||+|+.. ++.||||.+.... ..+.+.+|+.++++++||||+++++++.+. +..|+||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 356778899999999999999765 7899999987532 346788999999999999999999997655 4789999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+++|+|.+++..... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 170 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170 (278)
T ss_dssp CCCTTEEHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred ecCCCCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence 99999999999975421 2367888999999999999999998 9999999999999999999999999999865432
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
.....+++.|+|||
T Consensus 171 ---~~~~~~~~~y~aPE 184 (278)
T 1byg_A 171 ---QDTGKLPVKWTAPE 184 (278)
T ss_dssp --------CCTTTSCHH
T ss_pred ---ccCCCccccccCHH
Confidence 22346789999998
No 296
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.93 E-value=2.5e-26 Score=243.55 Aligned_cols=167 Identities=22% Similarity=0.352 Sum_probs=124.0
Q ss_pred ccCCC-cceeccCCCceEEEEEcC---CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEc--CCce
Q 046265 465 NNFDA-KYCIGTAGQASVYKAELP---SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH--PRQS 538 (639)
Q Consensus 465 ~~f~~-~~~ig~g~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~ 538 (639)
+.|.. .++||+|+||.||+|+.+ +++.||||++..... ...+.+|+.++++++|||||++++++.. ....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 44544 458999999999999765 568899999975432 2457899999999999999999999964 5688
Q ss_pred eEEecccCCCChhHHhhcCC------CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee----CCCCce
Q 046265 539 FLLYEYLGRGSLAIILSNDA------AIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL----GLDYDA 608 (639)
Q Consensus 539 ~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill----~~~~~~ 608 (639)
|+||||++ |+|.+++.... ....+++..+..++.|++.||+|||.. +|+||||||+||++ +.++.+
T Consensus 96 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcE
Confidence 99999996 57777775321 112488899999999999999999999 99999999999999 677899
Q ss_pred EEccccccccCCCCC---CCcceeeeeceeeCCC
Q 046265 609 HVSDFGISKFLKPDS---SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 609 kl~DfGla~~~~~~~---~~~~~~~gt~~Y~APE 639 (639)
||+|||+|+.+.... ......+||+.|+|||
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 205 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHH
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCch
Confidence 999999998765322 2234578999999998
No 297
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.93 E-value=1.1e-25 Score=251.78 Aligned_cols=169 Identities=21% Similarity=0.319 Sum_probs=139.3
Q ss_pred hccCCCcceeccCCCceEEEEEcC----CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCcee
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELP----SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSF 539 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 539 (639)
.++|+..+.||+|+||.||+|... .+..||||++.... .....+.+.+|+.++++++|||||++++++. ++..|
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 456778899999999999999754 24679999987543 3345577899999999999999999999985 46789
Q ss_pred EEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 540 LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 540 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
+||||+++|+|.++++... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 467 lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp EEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred EEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 9999999999999997543 2478899999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCC-CcceeeeeceeeCCC
Q 046265 620 KPDSS-NWSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~-~~~~~~gt~~Y~APE 639 (639)
..... ......||+.|||||
T Consensus 542 ~~~~~~~~~~~~~t~~y~aPE 562 (656)
T 2j0j_A 542 EDSTYYKASKGKLPIKWMAPE 562 (656)
T ss_dssp CC----------CCGGGCCHH
T ss_pred CCCcceeccCCCCCcceeCHH
Confidence 54322 223356788999998
No 298
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.92 E-value=8.5e-26 Score=228.10 Aligned_cols=169 Identities=24% Similarity=0.348 Sum_probs=131.6
Q ss_pred ccCCCcceeccCCCceEEEEEcC--CCc--EEEEEEccCCCC-ChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCcee
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP--SWE--IVAVKKFHSPHP-DMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSF 539 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~--~~~--~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 539 (639)
++|+..+.||+|+||.||+|... +++ .||||.++.... .....+.+.+|+.++++++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 56778899999999999999642 333 689999875432 2345677899999999999999999999998765 88
Q ss_pred EEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 540 LLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 540 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
+||||+++|+|.+++.... ..+++..+..++.|+++|++|||.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 97 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccc
Confidence 9999999999999997543 3478899999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCC---cceeeeeceeeCCC
Q 046265 620 KPDSSN---WSEFVGTFGYVAPI 639 (639)
Q Consensus 620 ~~~~~~---~~~~~gt~~Y~APE 639 (639)
...... .....||+.|+|||
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE 194 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPE 194 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHH
T ss_pred cccccchhhhccCCCCceeeCch
Confidence 543321 22356788999998
No 299
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.92 E-value=3e-26 Score=234.74 Aligned_cols=168 Identities=20% Similarity=0.295 Sum_probs=137.9
Q ss_pred hccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEec
Q 046265 464 TNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 543 (639)
.++|+..+.||+|+||.||+|...+ .||||.+..........+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 3567788999999999999997654 49999997654333334557789999999999999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC-
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD- 622 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~- 622 (639)
|+++++|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||+++ ++.+||+|||+++.....
T Consensus 110 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp CCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred cccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 999999999997643 3477899999999999999999998 999999999999998 679999999998764321
Q ss_pred ----CCCcceeeeeceeeCCC
Q 046265 623 ----SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ----~~~~~~~~gt~~Y~APE 639 (639)
........||+.|+|||
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE 204 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPE 204 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHH
T ss_pred ccccccccccCCCcccccChH
Confidence 11223456999999998
No 300
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.92 E-value=7.2e-26 Score=241.84 Aligned_cols=164 Identities=26% Similarity=0.321 Sum_probs=127.0
Q ss_pred CCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCceeEEeccc
Q 046265 467 FDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLLYEYL 545 (639)
Q Consensus 467 f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~ 545 (639)
|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.++.++ +|||||++++++.+++..|+|||||
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 3446789999999998887778999999998642 235578899999886 8999999999999999999999999
Q ss_pred CCCChhHHhhcCCCCCC----cCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC-------------Cce
Q 046265 546 GRGSLAIILSNDAAIDE----FSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLD-------------YDA 608 (639)
Q Consensus 546 ~~g~L~~~l~~~~~~~~----~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~-------------~~~ 608 (639)
+ |+|.+++........ ..+..+..++.|++.||+|||+. +|+||||||+||+++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 5 699999986543211 12334567999999999999998 99999999999999654 489
Q ss_pred EEccccccccCCCCCC----CcceeeeeceeeCCC
Q 046265 609 HVSDFGISKFLKPDSS----NWSEFVGTFGYVAPI 639 (639)
Q Consensus 609 kl~DfGla~~~~~~~~----~~~~~~gt~~Y~APE 639 (639)
||+|||+|+.+..... .....+||++|||||
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE 202 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPE 202 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHH
Confidence 9999999998754322 123468999999998
No 301
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.92 E-value=1e-25 Score=247.86 Aligned_cols=171 Identities=25% Similarity=0.342 Sum_probs=144.1
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEc------CC
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH------PR 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~ 536 (639)
..+|+..+.||+|+||.||+|.. .+|+.||||.+.... .....+.+.+|++++++++||||+++++++.. .+
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC-CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 36789999999999999999965 568999999987543 34456778999999999999999999999765 56
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc---eEEccc
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYD---AHVSDF 613 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~---~kl~Df 613 (639)
..|+||||+++|+|.+++........+++..+..++.+++.|++|||.. +|+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 7899999999999999998765444578889999999999999999998 9999999999999987665 999999
Q ss_pred cccccCCCCCCCcceeeeeceeeCCC
Q 046265 614 GISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 614 Gla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
|+++...... ......||+.|+|||
T Consensus 169 G~a~~~~~~~-~~~~~~gt~~Y~APE 193 (676)
T 3qa8_A 169 GYAKELDQGE-LCTEFVGTLQYLAPE 193 (676)
T ss_dssp CCCCBTTSCC-CCCCCCSCCTTCSSC
T ss_pred cccccccccc-ccccccCCcccCChH
Confidence 9998765432 234568999999998
No 302
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.92 E-value=2e-25 Score=228.58 Aligned_cols=165 Identities=24% Similarity=0.336 Sum_probs=131.7
Q ss_pred ccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEE----------
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSF---------- 533 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~---------- 533 (639)
.+|+..+.||+|+||.||+|... +++.||||++... .....+.+.+|+.++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 56778899999999999999655 5899999998753 2445677899999999999999999999884
Q ss_pred ----cCCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC-CCCce
Q 046265 534 ----HPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG-LDYDA 608 (639)
Q Consensus 534 ----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~-~~~~~ 608 (639)
.....|+||||++ |+|.+++... .+++..+..++.|++.|++|||.. +|+||||||+||+++ .++.+
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEE
T ss_pred ccccccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeE
Confidence 3357899999997 6999998642 477889999999999999999998 999999999999997 56799
Q ss_pred EEccccccccCCCCC---CCcceeeeeceeeCCC
Q 046265 609 HVSDFGISKFLKPDS---SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 609 kl~DfGla~~~~~~~---~~~~~~~gt~~Y~APE 639 (639)
||+|||+++...... .......||+.|+|||
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 194 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR 194 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHH
T ss_pred EEccCccccccCCCcccccccccccccccccCcH
Confidence 999999998764321 1223456799999998
No 303
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.92 E-value=2.7e-25 Score=224.99 Aligned_cols=167 Identities=18% Similarity=0.233 Sum_probs=135.8
Q ss_pred HhccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEE-EcCCceeE
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS-FHPRQSFL 540 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~l 540 (639)
..++|+..+.||+|+||.||+|.. .+++.||||.+..... .+.+.+|+.++++++|++++..+.++ ...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 457899999999999999999964 6789999998765332 23477899999999988877777666 56677899
Q ss_pred EecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee---CCCCceEEccccccc
Q 046265 541 LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISK 617 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill---~~~~~~kl~DfGla~ 617 (639)
||||+ +++|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||++ +.++.+||+|||+++
T Consensus 83 v~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EEECC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEEcc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 99999 999999997433 2488999999999999999999999 99999999999999 788999999999998
Q ss_pred cCCCCCC-------CcceeeeeceeeCCC
Q 046265 618 FLKPDSS-------NWSEFVGTFGYVAPI 639 (639)
Q Consensus 618 ~~~~~~~-------~~~~~~gt~~Y~APE 639 (639)
....... ......||+.|+|||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 185 (296)
T 4hgt_A 157 KYRDARTHQHIPYRENKNLTGTARYASIN 185 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCGGGCCHH
T ss_pred eccCcccCccCCCCcccccCCCccccchH
Confidence 7654322 123568999999998
No 304
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.92 E-value=2.6e-26 Score=238.70 Aligned_cols=163 Identities=18% Similarity=0.250 Sum_probs=136.6
Q ss_pred ccCCCcceeccCCCceEEEEEcCC---------CcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceee--------
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPS---------WEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVK-------- 527 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~-------- 527 (639)
++|+..+.||+|+||.||+|.... ++.||||.+... +.+.+|+.++++++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 567788999999999999997653 788999998753 24788999999999999987
Q ss_pred -------eEEEEEc-CCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCC
Q 046265 528 -------FYGFSFH-PRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKN 599 (639)
Q Consensus 528 -------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~N 599 (639)
+++++.. ++..|+||||+ +++|.+++.... ...+++..+..++.|++.||+|||.. +|+||||||+|
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~N 189 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAEN 189 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGG
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHH
Confidence 6777776 67889999999 999999998642 23588999999999999999999999 99999999999
Q ss_pred eeeCCCC--ceEEccccccccCCCCCC-------CcceeeeeceeeCCC
Q 046265 600 VLLGLDY--DAHVSDFGISKFLKPDSS-------NWSEFVGTFGYVAPI 639 (639)
Q Consensus 600 ill~~~~--~~kl~DfGla~~~~~~~~-------~~~~~~gt~~Y~APE 639 (639)
|+++.++ .+||+|||+++.+..... ......||+.|+|||
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 238 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMD 238 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHH
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHH
Confidence 9999988 899999999987643221 123358999999998
No 305
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.92 E-value=1.9e-27 Score=265.14 Aligned_cols=380 Identities=13% Similarity=0.056 Sum_probs=224.8
Q ss_pred ccccCCCCCCEEECcCCCC---ccCCCCCCC------------CCCCCCEEEcccCcCCCCCCcccCCC--CCCCEEeee
Q 046265 24 PQIGNISNLKFLDMGNNQL---SGVIPQEID------------PLTHLKHLYINVNKLRGSVPREVGQL--SSLKQLVLY 86 (639)
Q Consensus 24 ~~~~~l~~L~~L~Ls~n~l---~~~~p~~~~------------~L~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~ 86 (639)
..+..+++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..+..+ .+|++|+|+
T Consensus 67 ~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~ 146 (592)
T 3ogk_B 67 RLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLD 146 (592)
T ss_dssp HHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEE
T ss_pred HHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECc
Confidence 3345566666666665432 133443333 46666666666666654444444442 236666666
Q ss_pred ccc-Ccc-ccCccccCCCCCCcccCC-------------CCCcccCCCCccEEEccCCcCc----ccCCccccCCCCCCE
Q 046265 87 CNG-LSG-WLPSSFGNLNNLAIGSMP-------------NSLSNLTSLSLFHLDLSENQLS----GSIPHFLGHLSNLAV 147 (639)
Q Consensus 87 ~N~-l~~-~~p~~~~~l~~L~~~~lp-------------~~~~~l~~L~L~~L~L~~N~l~----~~~p~~~~~l~~L~~ 147 (639)
+|. ++. .++....++++|+...+. ....++++| ++|++++|.++ +.++..+.++++|++
T Consensus 147 ~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L--~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~ 224 (592)
T 3ogk_B 147 KCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSL--EVLNFYMTEFAKISPKDLETIARNCRSLVS 224 (592)
T ss_dssp SCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCC--CEEECTTCCCSSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCc--cEEEeeccCCCccCHHHHHHHHhhCCCCcE
Confidence 554 110 111111233333311111 111223344 57777777775 334445566777777
Q ss_pred EeccCCCCCCCCCccccCCCcccEEEcccCcCC---ccCCccCcCCCCCCeEEccC---CccccccccccCCcEEEcCCc
Q 046265 148 LHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLN---GVLPPSISNLSNLEGLYLYS---SLVSAEIGNLLQLIELEIDNK 221 (639)
Q Consensus 148 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~---~~~p~~~~~l~~L~~L~l~~---~~~~~~~~~l~~L~~L~l~~n 221 (639)
|+|++|.+.+ +|..+..+++|+.|+++..... +..+..+..+++|+.++++. ..++..+..+++|++|++++|
T Consensus 225 L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~ 303 (592)
T 3ogk_B 225 VKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYA 303 (592)
T ss_dssp EECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTC
T ss_pred EeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCC
Confidence 7777777764 5666777777777777653322 23445566777788877753 335566677888888888888
Q ss_pred ccCCCCC-ccccCCCCCceeccccccccCcchhhhhcCCCccEEeccC-----------Ccccc--------------cc
Q 046265 222 QLFGQIP-KSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQ-----------NNFYG--------------SL 275 (639)
Q Consensus 222 ~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-----------N~l~~--------------~l 275 (639)
.+.+... ..+..+++|+.|+++++...+.++..+..+++|++|++++ |.+++ .+
T Consensus 304 ~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L 383 (592)
T 3ogk_B 304 LLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYM 383 (592)
T ss_dssp CCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEE
T ss_pred cCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEE
Confidence 8654333 3357788888888884433444455556788888888883 45542 24
Q ss_pred cCcCCccccccCccccC-CCCCCEEecc----CCccccc-----CCccccCCCCCCeeeccCc--cCcccCCcCcc-CCC
Q 046265 276 NFSMNNITRSIPPKIGK-LYQLHKLDFS----LNHIVGE-----LPIELGNLKSLNYRALNGN--KVYGSLPRVLG-SIS 342 (639)
Q Consensus 276 ~ls~n~~~~~~p~~~~~-l~~L~~L~Ls----~N~~~~~-----~p~~~~~l~~L~~L~l~~N--~l~~~~p~~~~-~l~ 342 (639)
+++.|++++..+..+.. +++|+.|+++ .|++++. ++..+..+++|+.|+++++ .+++..+..++ .++
T Consensus 384 ~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~ 463 (592)
T 3ogk_B 384 AVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSP 463 (592)
T ss_dssp EEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCT
T ss_pred EeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCc
Confidence 55566666655555554 7778888885 5666542 3333566778888888643 35444443333 377
Q ss_pred CCCEEeCCCCCCCcccccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeeee
Q 046265 343 DLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELRG 417 (639)
Q Consensus 343 ~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~g 417 (639)
+|+.|++++|.+.. ..++..+..+++|+.|++++|.+++.. ....+..+++|+.|++++|++++
T Consensus 464 ~L~~L~L~~n~l~~--~~~~~~~~~~~~L~~L~l~~n~l~~~~---------~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 464 NVRWMLLGYVGESD--EGLMEFSRGCPNLQKLEMRGCCFSERA---------IAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp TCCEEEECSCCSSH--HHHHHHHTCCTTCCEEEEESCCCBHHH---------HHHHHHHCSSCCEEEEESCBCCT
T ss_pred cceEeeccCCCCCH--HHHHHHHhcCcccCeeeccCCCCcHHH---------HHHHHHhcCccCeeECcCCcCCH
Confidence 78888888754221 133445567788888888888764422 11344567888888888888653
No 306
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.92 E-value=2.5e-25 Score=228.80 Aligned_cols=170 Identities=24% Similarity=0.303 Sum_probs=124.4
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHH-HHhccccCceeeeEEEEEcCCceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIK-ALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~-~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
++|+..+.||+|+||.||+|.. .+++.||||++..... ......+.+|+. +++.++||||+++++++..++..|+||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 5677788999999999999965 5789999999986543 233445556665 677789999999999999999999999
Q ss_pred cccCCCChhHHhhcC--CCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCC
Q 046265 543 EYLGRGSLAIILSND--AAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 543 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
||+++ ++.+++... .....+++..+..++.+++.|++|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99985 777776531 11245788999999999999999999852 79999999999999999999999999998765
Q ss_pred CCCCCcceeeeeceeeCCC
Q 046265 621 PDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 621 ~~~~~~~~~~gt~~Y~APE 639 (639)
... ......||+.|+|||
T Consensus 178 ~~~-~~~~~~gt~~y~aPE 195 (327)
T 3aln_A 178 DSI-AKTRDAGCRPYMAPE 195 (327)
T ss_dssp -------------------
T ss_pred ccc-ccccCCCCccccCce
Confidence 332 223357999999998
No 307
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.92 E-value=4.8e-26 Score=232.50 Aligned_cols=170 Identities=19% Similarity=0.239 Sum_probs=136.0
Q ss_pred HHhccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCCh----hhHHHHHHHHHHHhcc----ccCceeeeEEEE
Q 046265 462 RATNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDM----VVQQAFSNEIKALTEL----RHRNVVKFYGFS 532 (639)
Q Consensus 462 ~~~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l----~H~niv~l~~~~ 532 (639)
...++|+..+.||+|+||.||+|.. .+++.||||.+....... .....+.+|+.++.++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 3457899999999999999999965 568899999997543211 1223456789999888 899999999999
Q ss_pred EcCCceeEEecc-cCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC-CCCceEE
Q 046265 533 FHPRQSFLLYEY-LGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG-LDYDAHV 610 (639)
Q Consensus 533 ~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~-~~~~~kl 610 (639)
...+..++|||| +++++|.+++.... .+++..+..++.|+++|++|||.. +|+||||||+||+++ .++.+||
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEE
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEE
Confidence 999999999999 78999999997643 478899999999999999999999 999999999999999 8899999
Q ss_pred ccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 611 SDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 611 ~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+|||+++..... ......||+.|+|||
T Consensus 182 ~dfg~~~~~~~~--~~~~~~~~~~y~aPE 208 (312)
T 2iwi_A 182 IDFGSGALLHDE--PYTDFDGTRVYSPPE 208 (312)
T ss_dssp CCCSSCEECCSS--CBCCCCSCTTTSCHH
T ss_pred EEcchhhhcccC--cccccCCcccccCce
Confidence 999999876532 234567999999998
No 308
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.92 E-value=7.2e-26 Score=232.02 Aligned_cols=169 Identities=20% Similarity=0.278 Sum_probs=142.7
Q ss_pred HhccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCCh----hhHHHHHHHHHHHhccc--cCceeeeEEEEEcC
Q 046265 463 ATNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDM----VVQQAFSNEIKALTELR--HRNVVKFYGFSFHP 535 (639)
Q Consensus 463 ~~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~ 535 (639)
..++|+..+.||+|+||.||+|. ..+++.||||.+....... ...+.+.+|+.++++++ ||||+++++++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 35678889999999999999995 5678999999987543211 12244678999999996 59999999999999
Q ss_pred CceeEEecccCC-CChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC-CCCceEEccc
Q 046265 536 RQSFLLYEYLGR-GSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG-LDYDAHVSDF 613 (639)
Q Consensus 536 ~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~-~~~~~kl~Df 613 (639)
+..++||||+.+ ++|.+++.... .+++..+..++.|+++||+|||.. +|+||||||+||+++ .++.+||+||
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred CcEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 999999999976 89999987643 477899999999999999999998 999999999999999 7899999999
Q ss_pred cccccCCCCCCCcceeeeeceeeCCC
Q 046265 614 GISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 614 Gla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
|+++..... ......||+.|+|||
T Consensus 195 g~~~~~~~~--~~~~~~gt~~y~aPE 218 (320)
T 3a99_A 195 GSGALLKDT--VYTDFDGTRVYSPPE 218 (320)
T ss_dssp TTCEECCSS--CBCCCCSCGGGSCHH
T ss_pred ccccccccc--cccCCCCCccCCChH
Confidence 999876532 233467999999998
No 309
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.92 E-value=1.5e-25 Score=238.76 Aligned_cols=164 Identities=23% Similarity=0.332 Sum_probs=129.6
Q ss_pred ccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcc-ccCceeeeEEEEEcCCceeEEec
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTEL-RHRNVVKFYGFSFHPRQSFLLYE 543 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e 543 (639)
.+|...++||+|+||.||.+...+++.||||++..... ..+.+|+.+++++ +|||||++++++.+.+..|+|||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 45777889999999997766667789999999975332 1246799999998 79999999999999999999999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC-----CCceEEcccccccc
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL-----DYDAHVSDFGISKF 618 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~-----~~~~kl~DfGla~~ 618 (639)
||+ |+|.+++..... ...+..+..++.|+++||+|||+. +|+||||||+||+++. ...+||+|||+|+.
T Consensus 99 ~~~-g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp CCS-EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred CCC-CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 996 699999976542 123344568999999999999998 9999999999999943 34688999999987
Q ss_pred CCCCC---CCcceeeeeceeeCCC
Q 046265 619 LKPDS---SNWSEFVGTFGYVAPI 639 (639)
Q Consensus 619 ~~~~~---~~~~~~~gt~~Y~APE 639 (639)
..... ......+||++|||||
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE 196 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPE 196 (432)
T ss_dssp C------------CCSCTTSCCGG
T ss_pred ccCCCcceeeccccCCCcCccChh
Confidence 65332 2234568999999998
No 310
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.92 E-value=2.8e-25 Score=234.74 Aligned_cols=165 Identities=19% Similarity=0.289 Sum_probs=135.9
Q ss_pred ccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc--------cCceeeeEEEEE--
Q 046265 465 NNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR--------HRNVVKFYGFSF-- 533 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~~~~~-- 533 (639)
.+|+..+.||+|+||.||+|. ..+++.||||++... ....+.+.+|+.++++++ ||||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 568888999999999999995 567889999999742 344567889999999986 788999999998
Q ss_pred --cCCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC-----
Q 046265 534 --HPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDY----- 606 (639)
Q Consensus 534 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~----- 606 (639)
.....|+||||+ ++++.+.+.... ...+++..+..++.|++.||+|||..+ +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhh
Confidence 456789999999 555555554322 135888999999999999999999854 799999999999998775
Q ss_pred --------------------------------------------ceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 607 --------------------------------------------DAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 607 --------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
.+||+|||+|+..... ....+||+.|||||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE 263 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLE 263 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHH
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCCh
Confidence 7999999999876532 23457999999998
No 311
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.92 E-value=4.7e-25 Score=227.61 Aligned_cols=165 Identities=20% Similarity=0.270 Sum_probs=140.9
Q ss_pred hccCCCcceeccCCCceEEEEEc--CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCc------eeeeEEEEEcC
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL--PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN------VVKFYGFSFHP 535 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~ 535 (639)
.++|+..+.||+|+||.||+|.. .+++.||||.+... ....+.+.+|+.+++.++|++ ++++++++...
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 35778889999999999999964 46789999998742 344567889999999998775 99999999999
Q ss_pred CceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC-----------
Q 046265 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL----------- 604 (639)
Q Consensus 536 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~----------- 604 (639)
+..++||||+ +++|.+++..... ..+++..+..++.|+++||+|||.. +|+||||||+||+++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC---
T ss_pred CcEEEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcc
Confidence 9999999999 8999999876542 3478899999999999999999998 9999999999999987
Q ss_pred --------CCceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 605 --------DYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 605 --------~~~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
++.+||+|||+++..... ....+||+.|+|||
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE 204 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPE 204 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHH
T ss_pred ccccccccCCCceEeeCcccccCccc---cccccCCccccChH
Confidence 668999999999875432 23467999999998
No 312
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.92 E-value=4.3e-25 Score=227.77 Aligned_cols=163 Identities=18% Similarity=0.261 Sum_probs=119.0
Q ss_pred hccCCC-cceeccCCCceEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHH-HHHhccccCceeeeEEEEEc----CC
Q 046265 464 TNNFDA-KYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEI-KALTELRHRNVVKFYGFSFH----PR 536 (639)
Q Consensus 464 ~~~f~~-~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~-~~l~~l~H~niv~l~~~~~~----~~ 536 (639)
.++|.. .++||+|+||.||+|... +++.||||.+... .. ..+|+ ..++.++||||+++++++.. ..
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---PK----ARQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---HH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---HH----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 456666 457999999999999654 7899999998642 11 22333 33556789999999999976 34
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC---CCceEEccc
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL---DYDAHVSDF 613 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~---~~~~kl~Df 613 (639)
..++||||+++|+|.+++..... ..+++..+..++.|++.|++|||.. +|+||||||+||+++. ++.+||+||
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC-C-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred eEEEEEeccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecc
Confidence 58999999999999999986543 3588999999999999999999999 9999999999999976 455999999
Q ss_pred cccccCCCCCCCcceeeeeceeeCCC
Q 046265 614 GISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 614 Gla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
|+++..... .....+||+.|+|||
T Consensus 176 g~~~~~~~~--~~~~~~~t~~y~aPE 199 (336)
T 3fhr_A 176 GFAKETTQN--ALQTPCYTPYYVAPE 199 (336)
T ss_dssp TTCEEC--------------------
T ss_pred ccceecccc--ccccCCCCcCccChh
Confidence 999876532 234567999999998
No 313
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.92 E-value=3.1e-25 Score=226.96 Aligned_cols=170 Identities=18% Similarity=0.264 Sum_probs=124.8
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.++|+..+.||+|+||.||+|.. .+++.||||.+..........+.+.++..+++.++||||+++++++..++..|+||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 35677788999999999999966 47899999999865443333445555666788889999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCCC
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
||+ ++.+..+..... ..+++..+..++.++++|++|||..+ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 104 e~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 555555554322 34788999999999999999999832 8999999999999999999999999999876432
Q ss_pred CCCcceeeeeceeeCCC
Q 046265 623 SSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 623 ~~~~~~~~gt~~Y~APE 639 (639)
. ......||+.|+|||
T Consensus 179 ~-~~~~~~~~~~y~aPE 194 (318)
T 2dyl_A 179 K-AKDRSAGCAAYMAPE 194 (318)
T ss_dssp ---------CCTTCCHH
T ss_pred c-cccccCCCccccChh
Confidence 2 223467999999998
No 314
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.92 E-value=4.6e-25 Score=223.26 Aligned_cols=166 Identities=18% Similarity=0.234 Sum_probs=138.6
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEE-EcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS-FHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lv 541 (639)
.++|+..+.||+|+||.||+|+. .+++.||||.+..... .+.+.+|+.++++++|++++..+.++ ...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence 46788889999999999999964 6789999999875432 23578999999999998877666665 556778999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee---CCCCceEEcccccccc
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKF 618 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill---~~~~~~kl~DfGla~~ 618 (639)
|||+ +++|.+++.... ..+++..+..++.|++.|++|||.. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 84 ~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 84 MELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp EECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 9999 999999997433 2588899999999999999999999 99999999999999 4788999999999987
Q ss_pred CCCCCC-------CcceeeeeceeeCCC
Q 046265 619 LKPDSS-------NWSEFVGTFGYVAPI 639 (639)
Q Consensus 619 ~~~~~~-------~~~~~~gt~~Y~APE 639 (639)
...... ......||+.|+|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE 185 (296)
T 3uzp_A 158 YRDARTHQHIPYRENKNLTGTARYASIN 185 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCTTTCCHH
T ss_pred ccccccccccccccccccccccccCChh
Confidence 654322 124568999999998
No 315
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.92 E-value=8.4e-25 Score=235.30 Aligned_cols=166 Identities=20% Similarity=0.284 Sum_probs=138.1
Q ss_pred hccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcccc-CceeeeEEEEEcCCceeEE
Q 046265 464 TNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRH-RNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~~~~~~~~~~~lv 541 (639)
.++|+..+.||+|+||.||+|. ..+++.||||.+...... ..+.+|+.+++.++| ++|+.+..++...+..++|
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lv 81 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLV 81 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence 3678889999999999999996 467899999987754322 247789999999987 5566666677778889999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee---CCCCceEEcccccccc
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL---GLDYDAHVSDFGISKF 618 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill---~~~~~~kl~DfGla~~ 618 (639)
|||+ +++|.+++.... ..+++..+..++.|++.||+|||.. +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 82 me~~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 82 MDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp EECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EECC-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 9999 999999997433 3588999999999999999999998 99999999999999 5889999999999987
Q ss_pred CCCCCCC-------cceeeeeceeeCCC
Q 046265 619 LKPDSSN-------WSEFVGTFGYVAPI 639 (639)
Q Consensus 619 ~~~~~~~-------~~~~~gt~~Y~APE 639 (639)
+...... ....+||+.|+|||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 183 (483)
T 3sv0_A 156 YRDTSTHQHIPYRENKNLTGTARYASVN 183 (483)
T ss_dssp CBCTTTCCBCCCCCCCCCCSCTTTCCHH
T ss_pred ccCCccccccccccccccCCCccccCHH
Confidence 6543221 22568999999998
No 316
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=7.7e-24 Score=212.09 Aligned_cols=127 Identities=20% Similarity=0.164 Sum_probs=81.1
Q ss_pred EEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCCCC
Q 046265 34 FLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSL 113 (639)
Q Consensus 34 ~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~ 113 (639)
..+.++..+. .+|..+. ++|++|++++|++++..+..|.++++|++|++++|++++..+..|.++++|
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L--------- 78 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHL--------- 78 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTC---------
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCC---------
Confidence 4555666665 4565553 467777777777775555567777777777777777776555555555522
Q ss_pred cccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCC
Q 046265 114 SNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLN 180 (639)
Q Consensus 114 ~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 180 (639)
++|+|++|++++..|..|.++++|++|++++|++.+..+..++.+++|++|++++|.++
T Consensus 79 --------~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 137 (276)
T 2z62_A 79 --------STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ 137 (276)
T ss_dssp --------CEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCC
T ss_pred --------CEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccc
Confidence 46777777776665666666777777777777666555545666666666666666554
No 317
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.91 E-value=1.5e-24 Score=227.93 Aligned_cols=167 Identities=20% Similarity=0.249 Sum_probs=138.1
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc-cC-----ceeeeEEEEEcCC
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR-HR-----NVVKFYGFSFHPR 536 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~~~~~~~~ 536 (639)
.++|+..+.||+|+||.||+|.. .+++.||||++... ......+.+|+.++..++ |+ +|+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 46788889999999999999964 56789999999742 334556778888888875 44 4999999999999
Q ss_pred ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC--CCCceEEcccc
Q 046265 537 QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG--LDYDAHVSDFG 614 (639)
Q Consensus 537 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~--~~~~~kl~DfG 614 (639)
..|+||||++ |+|.+++..... ..+++..+..++.|++.|++|||.+ ..+|+||||||+||+++ .++.+||+|||
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred ceEEEEecCC-CCHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 9999999996 599999876432 3478999999999999999999952 12899999999999994 57889999999
Q ss_pred ccccCCCCCCCcceeeeeceeeCCC
Q 046265 615 ISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 615 la~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+|+..... ....+||+.|+|||
T Consensus 207 ~a~~~~~~---~~~~~~t~~y~aPE 228 (382)
T 2vx3_A 207 SSCQLGQR---IYQYIQSRFYRSPE 228 (382)
T ss_dssp TCEETTCC---CCSSCSCGGGCCHH
T ss_pred Cceecccc---cccccCCccccChH
Confidence 99876432 23468999999998
No 318
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=1.5e-25 Score=244.84 Aligned_cols=155 Identities=14% Similarity=0.204 Sum_probs=121.4
Q ss_pred CCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCCh------hhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEE
Q 046265 468 DAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDM------VVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 468 ~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 541 (639)
...+.||+|+||.||+|.. .++.+|+|+........ ...+.+.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3456899999999999954 46788999876533221 1235589999999999999999777777778888999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccccCCC
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFLKP 621 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~~~ 621 (639)
|||+++|+|.++++. +..++.|+++|++|||.. +|+||||||+|||++. .+||+|||+|+....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999875 446899999999999998 9999999999999998 999999999998754
Q ss_pred CCCC-------cceeeeeceeeCCC
Q 046265 622 DSSN-------WSEFVGTFGYVAPI 639 (639)
Q Consensus 622 ~~~~-------~~~~~gt~~Y~APE 639 (639)
.... ....+||+.|||||
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APE 506 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDE 506 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHH
T ss_pred ccccccchhhhhhhhcCCCCcCCHH
Confidence 3221 13578999999998
No 319
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=2.6e-23 Score=207.51 Aligned_cols=160 Identities=32% Similarity=0.353 Sum_probs=80.8
Q ss_pred cceee-eEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCC
Q 046265 3 CLAFF-FFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLK 81 (639)
Q Consensus 3 ~~~~~-~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 81 (639)
|.|.. ...++++++++. .+|..+. +++++|+|++|.+++..+..|..+++|++|+|++|+++...+..|..+++|+
T Consensus 12 C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~ 88 (270)
T 2o6q_A 12 CSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLE 88 (270)
T ss_dssp BEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCC
T ss_pred CEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCC
Confidence 44432 234555555554 3444443 3555666666655544444555556666666655555533333345555555
Q ss_pred EEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCc
Q 046265 82 QLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPP 161 (639)
Q Consensus 82 ~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 161 (639)
+|++++|++++..+..|..+++| ++|++++|++++..|..|..+++|++|+|++|.+++..+.
T Consensus 89 ~L~l~~n~l~~~~~~~~~~l~~L-----------------~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 151 (270)
T 2o6q_A 89 TLWVTDNKLQALPIGVFDQLVNL-----------------AELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKG 151 (270)
T ss_dssp EEECCSSCCCCCCTTTTTTCSSC-----------------CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred EEECCCCcCCcCCHhHcccccCC-----------------CEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHh
Confidence 55555555554443344433321 3555555555544444455555555555555555543333
Q ss_pred cccCCCcccEEEcccCcCCcc
Q 046265 162 ILGKVQSLLSLGFDLNLLNGV 182 (639)
Q Consensus 162 ~~~~l~~L~~L~l~~N~l~~~ 182 (639)
.|..+++|+.|++++|.+++.
T Consensus 152 ~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 152 VFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp TTTTCTTCCEEECCSSCCSCC
T ss_pred HccCCcccceeEecCCcCcEe
Confidence 445555555555555554433
No 320
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.91 E-value=2.4e-24 Score=223.92 Aligned_cols=165 Identities=17% Similarity=0.254 Sum_probs=137.7
Q ss_pred hccCCCcceeccCCCceEEEEEc-CCC-cEEEEEEccCCCCChhhHHHHHHHHHHHhccccCc------eeeeEEEEEcC
Q 046265 464 TNNFDAKYCIGTAGQASVYKAEL-PSW-EIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN------VVKFYGFSFHP 535 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~~-~~~-~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~ 535 (639)
.++|+..+.||+|+||.||+|.. .++ +.||||.++.. ....+.+.+|+.++++++|++ ++.+++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 35778889999999999999965 344 68999998742 344567889999999998877 99999999999
Q ss_pred CceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee-------------
Q 046265 536 RQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLL------------- 602 (639)
Q Consensus 536 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill------------- 602 (639)
+..++||||+ ++++.+.+..... ..+++..+..++.|++.||+|||.. +|+||||||+||++
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKENNF-QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred CeEEEEEecc-CCChHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccc
Confidence 9999999999 5666666654332 3578899999999999999999998 99999999999999
Q ss_pred ------CCCCceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 603 ------GLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 603 ------~~~~~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+.++.+||+|||+++..... ....+||+.|+|||
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE 209 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPE 209 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHH
T ss_pred cccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCe
Confidence 56789999999999875432 23467999999998
No 321
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=6.1e-23 Score=204.80 Aligned_cols=201 Identities=27% Similarity=0.331 Sum_probs=149.5
Q ss_pred CCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCC
Q 046265 31 NLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMP 110 (639)
Q Consensus 31 ~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp 110 (639)
+.+.+++++++++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|++++|+++...+..|.++++|
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L------ 87 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNL------ 87 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTC------
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCC------
Confidence 5788999999988 5676665 678999999999886666688889999999999998886555555666533
Q ss_pred CCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCC
Q 046265 111 NSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNL 190 (639)
Q Consensus 111 ~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 190 (639)
++|++++|++++..+..|..+++|++|+|++|++++..|..|..+++|++|++++|.+++..+..|..+
T Consensus 88 -----------~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 156 (270)
T 2o6q_A 88 -----------ETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKL 156 (270)
T ss_dssp -----------CEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred -----------CEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCC
Confidence 588888888886666777888888888888888887777778888888888888888876554444433
Q ss_pred CCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCc
Q 046265 191 SNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNN 270 (639)
Q Consensus 191 ~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 270 (639)
++|+.|++++|++.+..+..|..+++|+.|++++|.+++..+..|..+++|+.|++++|.
T Consensus 157 --------------------~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (270)
T 2o6q_A 157 --------------------TSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENP 216 (270)
T ss_dssp --------------------TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred --------------------cccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCC
Confidence 445555566666666555567777777777777777776666666667777777766665
Q ss_pred c
Q 046265 271 F 271 (639)
Q Consensus 271 l 271 (639)
+
T Consensus 217 ~ 217 (270)
T 2o6q_A 217 W 217 (270)
T ss_dssp B
T ss_pred e
Confidence 5
No 322
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.91 E-value=1.5e-24 Score=227.18 Aligned_cols=165 Identities=21% Similarity=0.289 Sum_probs=137.9
Q ss_pred ccCCCcceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc-----------cCceeeeEEEE
Q 046265 465 NNFDAKYCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR-----------HRNVVKFYGFS 532 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~~~~ 532 (639)
.+|...+.||+|+||.||+|.. .+++.||||.+.. .....+.+.+|+.++++++ ||||+++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC---CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 5678889999999999999964 6789999999874 2344567889999998886 89999999999
Q ss_pred EcCC----ceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC-----
Q 046265 533 FHPR----QSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLG----- 603 (639)
Q Consensus 533 ~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~----- 603 (639)
...+ ..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||..+ +|+||||||+||+++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETT
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCC
Confidence 8654 689999999 8999999876432 34788999999999999999999853 799999999999994
Q ss_pred -CCCceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 604 -LDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 604 -~~~~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
..+.+||+|||+++..... ....+||+.|+|||
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE 205 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPE 205 (373)
T ss_dssp TTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHH
T ss_pred cCcceEEEcccccccccCCC---CCCCCCCccccCcH
Confidence 4458999999999876532 23457999999998
No 323
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.90 E-value=1.4e-23 Score=211.09 Aligned_cols=145 Identities=13% Similarity=0.055 Sum_probs=126.6
Q ss_pred ccCCCcceeccCCCceEEEEEcC-CCcEEEEEEccCCCCC-hhhHHHHHHHHHHHhccccCceeeeEEEEEcCCceeEEe
Q 046265 465 NNFDAKYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHPD-MVVQQAFSNEIKALTELRHRNVVKFYGFSFHPRQSFLLY 542 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 542 (639)
.+|+..+.||+|+||.||+|... +++.||||.+...... ....+.+.+|+..+++++||||+++++++..++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 46778899999999999999654 5899999999865432 344577899999999999999999999999999999999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
||+++++|.++++.. .....+.+++.|++.||+|||.. +|+||||||+||+++.++.+||+++|...
T Consensus 111 e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~~ 177 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATMP 177 (286)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred EecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEeccccC
Confidence 999999999999643 23346788999999999999999 99999999999999999999999887653
No 324
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=2.3e-23 Score=208.13 Aligned_cols=211 Identities=24% Similarity=0.294 Sum_probs=107.7
Q ss_pred ccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCC
Q 046265 26 IGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLA 105 (639)
Q Consensus 26 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 105 (639)
+..+++|+.|++++|.++. + ..+..+++|++|++++|.+++ + +.+..+++|++|++++|.+++..+..|.++++|
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L- 111 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL- 111 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC-
T ss_pred cccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCC-
Confidence 3445556666666665542 2 235555666666666665553 2 245555555555555555554444444444322
Q ss_pred cccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCc
Q 046265 106 IGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPP 185 (639)
Q Consensus 106 ~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 185 (639)
++|++++|++++..+..|..+++|++|+|++|++++..|..++.+++|+.|++++|.++
T Consensus 112 ----------------~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~----- 170 (272)
T 3rfs_A 112 ----------------KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ----- 170 (272)
T ss_dssp ----------------CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-----
T ss_pred ----------------CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcC-----
Confidence 35555555555444444555555555555555555444444445555555555555444
Q ss_pred cCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEe
Q 046265 186 SISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLD 265 (639)
Q Consensus 186 ~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 265 (639)
+..|..+..+++|+.|++++|.+++..+..+..+++|+.|+
T Consensus 171 ---------------------------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 211 (272)
T 3rfs_A 171 ---------------------------------------SLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW 211 (272)
T ss_dssp ---------------------------------------CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred ---------------------------------------ccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEE
Confidence 33333444455555555555555555554455555555555
Q ss_pred ccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCC
Q 046265 266 LSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKS 319 (639)
Q Consensus 266 Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~ 319 (639)
+++|.+. +.+++|+.|++..|.+.|.+|.+++.+..
T Consensus 212 l~~N~~~------------------~~~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 212 LHDNPWD------------------CTCPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CCSSCBC------------------CCTTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred ccCCCcc------------------ccCcHHHHHHHHHHhCCCcccCcccccCC
Confidence 5444432 12234555556666666666655554433
No 325
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.90 E-value=4.4e-26 Score=254.03 Aligned_cols=356 Identities=14% Similarity=0.071 Sum_probs=229.0
Q ss_pred CCCCCCCCCCCCEEEcccCcC---CCCCCcccC------------CCCCCCEEeeecccCccccCccccC-----CCCCC
Q 046265 46 IPQEIDPLTHLKHLYINVNKL---RGSVPREVG------------QLSSLKQLVLYCNGLSGWLPSSFGN-----LNNLA 105 (639)
Q Consensus 46 ~p~~~~~L~~L~~L~L~~N~l---~~~~p~~~~------------~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~ 105 (639)
.+..+..+++|+.|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..++. |+.|.
T Consensus 65 ~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~ 144 (592)
T 3ogk_B 65 PDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLK 144 (592)
T ss_dssp HHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEE
T ss_pred hHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEE
Confidence 344557789999999987532 135555555 6899999999999988776665544 33333
Q ss_pred ccc--------CCCCCcccCCCCccEEEccCCcCccc----CCccccCCCCCCEEeccCCCCCC----CCCccccCCCcc
Q 046265 106 IGS--------MPNSLSNLTSLSLFHLDLSENQLSGS----IPHFLGHLSNLAVLHLGDNSLFG----SIPPILGKVQSL 169 (639)
Q Consensus 106 ~~~--------lp~~~~~l~~L~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L 169 (639)
+.. ++....++++| ++|+|++|.+++. ++..+..+++|++|++++|.+++ .++..+..+++|
T Consensus 145 L~~~~~~~~~~l~~~~~~~~~L--~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L 222 (592)
T 3ogk_B 145 LDKCSGFTTDGLLSIVTHCRKI--KTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSL 222 (592)
T ss_dssp EESCEEEEHHHHHHHHHHCTTC--SEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTC
T ss_pred CcCCCCcCHHHHHHHHhhCCCC--CEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCC
Confidence 211 11112245666 7999999988765 44456678999999999999873 334455678999
Q ss_pred cEEEcccCcCCccCCccCcCCCCCCeEEccCC-------ccccccccccCCcEEEcCCcccCCCCCccccCCCCCceecc
Q 046265 170 LSLGFDLNLLNGVLPPSISNLSNLEGLYLYSS-------LVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHL 242 (639)
Q Consensus 170 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~-------~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 242 (639)
+.|++++|.+.+ +|..+..+++|+.|+++.. .....+..+++|+.|+++++. .+.+|..+..+++|++|++
T Consensus 223 ~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~L 300 (592)
T 3ogk_B 223 VSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDL 300 (592)
T ss_dssp CEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEE
T ss_pred cEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEec
Confidence 999999998886 5678888999999999631 223456778899999998864 3567888889999999999
Q ss_pred ccccccCcch-hhhhcCCCccEEeccCCcccc--------------cccCc-----------CCccccc-cCccccCCCC
Q 046265 243 EQNHLTGNIY-EVFGIYPNLTFLDLSQNNFYG--------------SLNFS-----------MNNITRS-IPPKIGKLYQ 295 (639)
Q Consensus 243 ~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~--------------~l~ls-----------~n~~~~~-~p~~~~~l~~ 295 (639)
++|.+++... ..+..+++|+.|+++ +.+.. .++++ .|.++.. ++.....+++
T Consensus 301 s~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 379 (592)
T 3ogk_B 301 LYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQE 379 (592)
T ss_dssp TTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTT
T ss_pred CCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCcc
Confidence 9999876544 446889999999998 43321 23444 2333322 1122233566
Q ss_pred CCEEeccCCcccccCCccccC-CCCCCeeecc----CccCccc-----CCcCccCCCCCCEEeCCCCCCCcccccCChhh
Q 046265 296 LHKLDFSLNHIVGELPIELGN-LKSLNYRALN----GNKVYGS-----LPRVLGSISDLEYLDLSTNYNNEFRKEFPVEL 365 (639)
Q Consensus 296 L~~L~Ls~N~~~~~~p~~~~~-l~~L~~L~l~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~ 365 (639)
|+.|+++.|.+++..+..+.. +++|+.|+++ .|.+++. ++..+..+++|+.|+++++. +.+.+..+..+
T Consensus 380 L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~-~~l~~~~~~~~ 458 (592)
T 3ogk_B 380 LEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQ-GGLTDLGLSYI 458 (592)
T ss_dssp CSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCG-GGCCHHHHHHH
T ss_pred CeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCC-CCccHHHHHHH
Confidence 666666666665554444443 5666666664 4455432 22334456666666665422 12222222222
Q ss_pred h-ccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeee
Q 046265 366 E-KLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELR 416 (639)
Q Consensus 366 ~-~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~ 416 (639)
. .+++|+.|+++.|.+++.. .+..+..+++|+.||+++|.++
T Consensus 459 ~~~~~~L~~L~L~~n~l~~~~---------~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 459 GQYSPNVRWMLLGYVGESDEG---------LMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp HHSCTTCCEEEECSCCSSHHH---------HHHHHTCCTTCCEEEEESCCCB
T ss_pred HHhCccceEeeccCCCCCHHH---------HHHHHhcCcccCeeeccCCCCc
Confidence 2 2556666666666544321 1133455667777777777654
No 326
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.2e-22 Score=204.58 Aligned_cols=138 Identities=25% Similarity=0.237 Sum_probs=95.2
Q ss_pred cccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCC
Q 046265 25 QIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNL 104 (639)
Q Consensus 25 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 104 (639)
.+.++++++++++++|+++ .+|..+. ++++.|+|++|++++..|..|..+++|++|+|++|++++..+. +.++
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~-- 77 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLP-- 77 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCT--
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCC--
Confidence 3567778888888888887 5566554 5788888888888766677788888888888888877754322 2333
Q ss_pred CcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCC
Q 046265 105 AIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLP 184 (639)
Q Consensus 105 ~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 184 (639)
+| ++|++++|+++ .+|..+..+++|++|+|++|++++..|..|..+++|++|++++|++++..+
T Consensus 78 -------------~L--~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~ 141 (290)
T 1p9a_G 78 -------------VL--GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPP 141 (290)
T ss_dssp -------------TC--CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCT
T ss_pred -------------cC--CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccCh
Confidence 22 57777777776 566667777777777777777776555666666777777776666664443
Q ss_pred c
Q 046265 185 P 185 (639)
Q Consensus 185 ~ 185 (639)
.
T Consensus 142 ~ 142 (290)
T 1p9a_G 142 G 142 (290)
T ss_dssp T
T ss_pred h
Confidence 3
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=4.9e-23 Score=205.70 Aligned_cols=204 Identities=24% Similarity=0.319 Sum_probs=165.4
Q ss_pred eEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeec
Q 046265 8 FFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYC 87 (639)
Q Consensus 8 ~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 87 (639)
+..+++.+|.+.. + +.+..+++|++|+|++|.+++. +.+..+++|++|+|++|.+++..|..|+.+++|++|++++
T Consensus 43 L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 118 (272)
T 3rfs_A 43 IDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE 118 (272)
T ss_dssp CCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred eeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCC
Confidence 4567788888763 3 4688999999999999999863 4799999999999999999977777789999999999999
Q ss_pred ccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCC
Q 046265 88 NGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQ 167 (639)
Q Consensus 88 N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 167 (639)
|++++..+..|+.+++| ++|++++|++++..+..+..+++|++|++++|++++..|..++.++
T Consensus 119 n~l~~~~~~~~~~l~~L-----------------~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 181 (272)
T 3rfs_A 119 NQLQSLPDGVFDKLTNL-----------------TYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLT 181 (272)
T ss_dssp SCCCCCCTTTTTTCTTC-----------------CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CcCCccCHHHhccCCCC-----------------CEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCc
Confidence 99998777777777743 5999999999987777889999999999999999988778889999
Q ss_pred cccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccc
Q 046265 168 SLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHL 247 (639)
Q Consensus 168 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 247 (639)
+|+.|++++|.+++..|..+..+++|+.|++ ++|.+.+ .+++|+.|++..|.+
T Consensus 182 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l--------------------~~N~~~~-------~~~~l~~l~~~~n~~ 234 (272)
T 3rfs_A 182 QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWL--------------------HDNPWDC-------TCPGIRYLSEWINKH 234 (272)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEEC--------------------CSSCBCC-------CTTTTHHHHHHHHHT
T ss_pred cCCEEECCCCcCCccCHHHHhCCcCCCEEEc--------------------cCCCccc-------cCcHHHHHHHHHHhC
Confidence 9999999999999887776776666665555 4454433 234566666666666
Q ss_pred cCcchhhhhcCC
Q 046265 248 TGNIYEVFGIYP 259 (639)
Q Consensus 248 ~~~~~~~~~~l~ 259 (639)
+|.+|..++.++
T Consensus 235 ~g~ip~~~~~~~ 246 (272)
T 3rfs_A 235 SGVVRNSAGSVA 246 (272)
T ss_dssp GGGBBCTTSCBC
T ss_pred CCcccCcccccC
Confidence 666666555443
No 328
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=8e-23 Score=200.05 Aligned_cols=205 Identities=14% Similarity=0.162 Sum_probs=145.3
Q ss_pred cccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCc-CCCCCCcccCCCCCCCEEeeec-ccCccccCc
Q 046265 19 FAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNK-LRGSVPREVGQLSSLKQLVLYC-NGLSGWLPS 96 (639)
Q Consensus 19 ~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~ 96 (639)
.+.+|. +. ++|++|+|++|++++..+..|..+++|++|++++|+ ++...+..|.++++|++|++++ |++++..+.
T Consensus 23 l~~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~ 99 (239)
T 2xwt_C 23 IQRIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPD 99 (239)
T ss_dssp CSSCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTT
T ss_pred ccccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHH
Confidence 456777 54 389999999999987777788899999999999996 8755556788889999999988 888876667
Q ss_pred cccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCC---EEeccCC-CCCCCCCccccCCCccc-E
Q 046265 97 SFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLA---VLHLGDN-SLFGSIPPILGKVQSLL-S 171 (639)
Q Consensus 97 ~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~ 171 (639)
.|.++++| ++|++++|++++ +|. +..+++|+ +|++++| ++++..+..|..+++|+ .
T Consensus 100 ~f~~l~~L-----------------~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~ 160 (239)
T 2xwt_C 100 ALKELPLL-----------------KFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLT 160 (239)
T ss_dssp SEECCTTC-----------------CEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEE
T ss_pred HhCCCCCC-----------------CEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeE
Confidence 77776633 478888888875 666 77778887 8888888 77766666677888888 8
Q ss_pred EEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcc-cCCCCCccccCC-CCCceeccccccccC
Q 046265 172 LGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQ-LFGQIPKSLRNF-TSLNIVHLEQNHLTG 249 (639)
Q Consensus 172 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~ 249 (639)
|++++|.++...+..+. . ++|+.|++++|+ +.+..+..|.++ ++|+.|++++|.+++
T Consensus 161 L~l~~n~l~~i~~~~~~--------------------~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~ 219 (239)
T 2xwt_C 161 LKLYNNGFTSVQGYAFN--------------------G-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA 219 (239)
T ss_dssp EECCSCCCCEECTTTTT--------------------T-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC
T ss_pred EEcCCCCCcccCHhhcC--------------------C-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc
Confidence 88888877632222221 1 345566666663 555445566666 677777777777665
Q ss_pred cchhhhhcCCCccEEeccCC
Q 046265 250 NIYEVFGIYPNLTFLDLSQN 269 (639)
Q Consensus 250 ~~~~~~~~l~~L~~L~Ls~N 269 (639)
.++. .+++|+.|+++++
T Consensus 220 l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 220 LPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CCCT---TCTTCSEEECTTC
T ss_pred CChh---HhccCceeeccCc
Confidence 4433 4456666665543
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=2.1e-22 Score=202.82 Aligned_cols=204 Identities=22% Similarity=0.208 Sum_probs=145.9
Q ss_pred CCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccC
Q 046265 49 EIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSE 128 (639)
Q Consensus 49 ~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~ 128 (639)
.+.++++++.+++++|.++ .+|..+. ++|+.|+|++|++++..|..|.++++| ++|+|++
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L-----------------~~L~L~~ 64 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRL-----------------TQLNLDR 64 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTC-----------------CEEECTT
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCC-----------------CEEECCC
Confidence 3677888999999999988 6777665 688889999998888777777777633 4888888
Q ss_pred CcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccc
Q 046265 129 NQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIG 208 (639)
Q Consensus 129 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~ 208 (639)
|++++. +.. ..+++|++|+|++|+++ .+|..+..+++|++|++++|++++..|..|..++
T Consensus 65 n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~----------------- 124 (290)
T 1p9a_G 65 AELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG----------------- 124 (290)
T ss_dssp SCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCT-----------------
T ss_pred CccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCC-----------------
Confidence 888754 333 67888888888888887 5777778888888888888888766555554443
Q ss_pred cccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCc
Q 046265 209 NLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPP 288 (639)
Q Consensus 209 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~ 288 (639)
+|+.|++++|++.+..+..|..+++|+.|++++|++++..+..|..+++|+.|++++|++ ..+|.
T Consensus 125 ---~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l------------~~ip~ 189 (290)
T 1p9a_G 125 ---ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL------------YTIPK 189 (290)
T ss_dssp ---TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCC------------CCCCT
T ss_pred ---CCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcC------------CccCh
Confidence 444555566666665556666777777777777777766666666677777777666655 24566
Q ss_pred cccCCCCCCEEeccCCccc
Q 046265 289 KIGKLYQLHKLDFSLNHIV 307 (639)
Q Consensus 289 ~~~~l~~L~~L~Ls~N~~~ 307 (639)
.+....+|+.+++++|.+.
T Consensus 190 ~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 190 GFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp TTTTTCCCSEEECCSCCBC
T ss_pred hhcccccCCeEEeCCCCcc
Confidence 6666666666666666654
No 330
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=2.1e-24 Score=225.11 Aligned_cols=265 Identities=16% Similarity=0.103 Sum_probs=139.9
Q ss_pred EeCCCcccccCCccccCCCCCCEEECcCCCCccCCC----CCCCCCC-CCCEEEcccCcCCCCCCcccCCC-----CCCC
Q 046265 12 VHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIP----QEIDPLT-HLKHLYINVNKLRGSVPREVGQL-----SSLK 81 (639)
Q Consensus 12 ~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p----~~~~~L~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~ 81 (639)
.++.|++.+.+|..+...++|++|||++|.+++..+ ..+..++ +|++|+|++|++++..+..+..+ ++|+
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 83 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCcc
Confidence 466777777777766666667777777777775555 5566676 77777777777776556555554 6777
Q ss_pred EEeeecccCccccCccccCCCCCCcccCCCCCccc-CCCCccEEEccCCcCcccCCcccc----C-CCCCCEEeccCCCC
Q 046265 82 QLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNL-TSLSLFHLDLSENQLSGSIPHFLG----H-LSNLAVLHLGDNSL 155 (639)
Q Consensus 82 ~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l-~~L~L~~L~L~~N~l~~~~p~~~~----~-l~~L~~L~L~~N~l 155 (639)
+|+|++|++++..+..+... +..+ + +|++|+|++|++++..+..+. . .++|++|+|++|.+
T Consensus 84 ~L~Ls~n~l~~~~~~~l~~~-----------l~~~~~--~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l 150 (362)
T 3goz_A 84 SLNLSGNFLSYKSSDELVKT-----------LAAIPF--TITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDL 150 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHH-----------HHTSCT--TCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCG
T ss_pred EEECcCCcCChHHHHHHHHH-----------HHhCCC--CccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcC
Confidence 77777777765555443321 0000 1 224667777766654443332 2 24666666666666
Q ss_pred CCCCC----ccccCCC-cccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccc-cCCcEEEcCCcccCCC---
Q 046265 156 FGSIP----PILGKVQ-SLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNL-LQLIELEIDNKQLFGQ--- 226 (639)
Q Consensus 156 ~~~~p----~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l-~~L~~L~l~~n~l~~~--- 226 (639)
+...+ ..+..++ +|++|++++|.+++..+..+. ..+... ++|+.|++++|.+...
T Consensus 151 ~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~----------------~~l~~~~~~L~~L~Ls~N~i~~~~~~ 214 (362)
T 3goz_A 151 GIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELA----------------KFLASIPASVTSLDLSANLLGLKSYA 214 (362)
T ss_dssp GGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHH----------------HHHHTSCTTCCEEECTTSCGGGSCHH
T ss_pred CHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHH----------------HHHHhCCCCCCEEECCCCCCChhHHH
Confidence 53222 2223333 566666666655543332221 112223 3566666666665442
Q ss_pred -CCccccC-CCCCceeccccccccCcchh----hhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEe
Q 046265 227 -IPKSLRN-FTSLNIVHLEQNHLTGNIYE----VFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLD 300 (639)
Q Consensus 227 -~p~~~~~-l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~ 300 (639)
++..+.. .++|+.|++++|.+++..+. .+..+++|+.|++++|.+.+. ....+ ..++..+..+++|+.||
T Consensus 215 ~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i---~~~~~-~~l~~~~~~l~~L~~Ld 290 (362)
T 3goz_A 215 ELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNM---SKEQC-KALGAAFPNIQKIILVD 290 (362)
T ss_dssp HHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTC---CHHHH-HHHHTTSTTCCEEEEEC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCcccc---CHHHH-HHHHHHhccCCceEEEe
Confidence 2333333 23566666666666554332 233445555555555543210 00000 11223344455555555
Q ss_pred ccCCccccc
Q 046265 301 FSLNHIVGE 309 (639)
Q Consensus 301 Ls~N~~~~~ 309 (639)
+++|.+...
T Consensus 291 L~~N~l~~~ 299 (362)
T 3goz_A 291 KNGKEIHPS 299 (362)
T ss_dssp TTSCBCCGG
T ss_pred cCCCcCCCc
Confidence 555555443
No 331
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=5e-22 Score=195.88 Aligned_cols=179 Identities=24% Similarity=0.275 Sum_probs=150.9
Q ss_pred ccce-eeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCC
Q 046265 2 SCLA-FFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSL 80 (639)
Q Consensus 2 ~~~~-~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L 80 (639)
+|.| -....++.+++++. .+|..+. +++++|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|
T Consensus 9 gC~C~~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 85 (251)
T 3m19_A 9 GCTCNEGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTEL 85 (251)
T ss_dssp SSEEEGGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ceEcCCCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcC
Confidence 4777 34456888888877 6777765 689999999999998888899999999999999999998788889999999
Q ss_pred CEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCC
Q 046265 81 KQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIP 160 (639)
Q Consensus 81 ~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 160 (639)
++|+|++|++++..+..|..+++| ++|+|++|++++..+..|..+++|++|+|++|++++..+
T Consensus 86 ~~L~L~~n~l~~~~~~~~~~l~~L-----------------~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 148 (251)
T 3m19_A 86 GTLGLANNQLASLPLGVFDHLTQL-----------------DKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPA 148 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTC-----------------CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CEEECCCCcccccChhHhcccCCC-----------------CEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCH
Confidence 999999999997777777777643 589999999997777778999999999999999998777
Q ss_pred ccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccC
Q 046265 161 PILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYS 200 (639)
Q Consensus 161 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 200 (639)
..|+.+++|+.|++++|.+++..+..+..+++|+.|++++
T Consensus 149 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 188 (251)
T 3m19_A 149 GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFG 188 (251)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred HHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeC
Confidence 7899999999999999999987776776666555554443
No 332
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.89 E-value=7e-23 Score=207.64 Aligned_cols=146 Identities=18% Similarity=0.279 Sum_probs=125.0
Q ss_pred ccCCCc-ceeccCCCceEEEEEc-CCCcEEEEEEccCCCCChhhHHHHHHHHHHH-hccccCceeeeEEEEEc----CCc
Q 046265 465 NNFDAK-YCIGTAGQASVYKAEL-PSWEIVAVKKFHSPHPDMVVQQAFSNEIKAL-TELRHRNVVKFYGFSFH----PRQ 537 (639)
Q Consensus 465 ~~f~~~-~~ig~g~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~~~~~~----~~~ 537 (639)
++|... +.||+|+||.||+|.. .+++.||||.+.. ...+.+|+.++ +..+||||+++++++.. ...
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 445554 7899999999999954 6789999999863 23467888888 55689999999999986 567
Q ss_pred eeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC---CCceEEcccc
Q 046265 538 SFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL---DYDAHVSDFG 614 (639)
Q Consensus 538 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~---~~~~kl~DfG 614 (639)
.|+||||+++|+|.+++..... ..+++..+..++.|++.|++|||.. +|+||||||+||+++. ++.+||+|||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 8999999999999999986432 3578899999999999999999998 9999999999999997 7889999999
Q ss_pred ccccCCC
Q 046265 615 ISKFLKP 621 (639)
Q Consensus 615 la~~~~~ 621 (639)
+++....
T Consensus 166 ~a~~~~~ 172 (299)
T 3m2w_A 166 FAKETTG 172 (299)
T ss_dssp TCEECTT
T ss_pred ccccccc
Confidence 9987653
No 333
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.88 E-value=3.1e-23 Score=219.95 Aligned_cols=168 Identities=15% Similarity=0.184 Sum_probs=124.1
Q ss_pred hccCCCcceeccCCCceEEEEE-cCCCcEEEEEEccCCC-CChhhHHHHHHHHHHHhcccc-Cceee-------------
Q 046265 464 TNNFDAKYCIGTAGQASVYKAE-LPSWEIVAVKKFHSPH-PDMVVQQAFSNEIKALTELRH-RNVVK------------- 527 (639)
Q Consensus 464 ~~~f~~~~~ig~g~~g~vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~H-~niv~------------- 527 (639)
+.+|...++||+|+||.||+|. ..+|+.||||++.... ......+.+.+|+.+++.++| +|...
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3456677899999999999996 6678999999987432 222335678999999999977 22111
Q ss_pred --------eEEEEEc-----CCceeEEecccCCCChhHHhhc----CCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 046265 528 --------FYGFSFH-----PRQSFLLYEYLGRGSLAIILSN----DAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPI 590 (639)
Q Consensus 528 --------l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~i 590 (639)
+..++.. ....+++|+++ +++|.++++. ......++|..+..++.|+++||+|||+. +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 1111111 12356777755 6899988841 11223577889999999999999999998 99
Q ss_pred EeecCCCCCeeeCCCCceEEccccccccCCCCCCCcceeeeeceeeCCC
Q 046265 591 VHRDISSKNVLLGLDYDAHVSDFGISKFLKPDSSNWSEFVGTFGYVAPI 639 (639)
Q Consensus 591 iHrdlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~gt~~Y~APE 639 (639)
+||||||+|||++.++.+||+|||+++..... ....+| +.|||||
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE 277 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPE 277 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCch
Confidence 99999999999999999999999999875432 344678 9999998
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=2.1e-22 Score=205.13 Aligned_cols=229 Identities=18% Similarity=0.159 Sum_probs=165.7
Q ss_pred CCCCEEECcCCCCccCC-C--CCCCCCCCCCEEEcccCcCCCCCCccc--CCCCCCCEEeeecccCccccC----ccccC
Q 046265 30 SNLKFLDMGNNQLSGVI-P--QEIDPLTHLKHLYINVNKLRGSVPREV--GQLSSLKQLVLYCNGLSGWLP----SSFGN 100 (639)
Q Consensus 30 ~~L~~L~Ls~n~l~~~~-p--~~~~~L~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~ 100 (639)
..++.|.+.++.++... . ..+..+++|++|++++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 35788888888775210 0 012345679999999999998888888 889999999999999987554 22233
Q ss_pred CCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCC--C--CccccCCCcccEEEccc
Q 046265 101 LNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGS--I--PPILGKVQSLLSLGFDL 176 (639)
Q Consensus 101 l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~l~~ 176 (639)
++ +| ++|+|++|++++..|..+..+++|++|+|++|++.+. + +..++.+++|++|++++
T Consensus 144 ~~---------------~L--~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~ 206 (310)
T 4glp_A 144 KP---------------GL--KVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRN 206 (310)
T ss_dssp CS---------------CC--CEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCS
T ss_pred cc---------------CC--CEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCC
Confidence 33 33 6899999999888888899999999999999988652 2 23347889999999999
Q ss_pred CcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCC---CCCceeccccccccCcchh
Q 046265 177 NLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNF---TSLNIVHLEQNHLTGNIYE 253 (639)
Q Consensus 177 N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~~~ 253 (639)
|.++.. |... ...+..+++|++|++++|++.+..|..+..+ ++|++|++++|+++. +|.
T Consensus 207 N~l~~l-~~~~----------------~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~-lp~ 268 (310)
T 4glp_A 207 TGMETP-TGVC----------------AALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ-VPK 268 (310)
T ss_dssp SCCCCH-HHHH----------------HHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS-CCS
T ss_pred CCCCch-HHHH----------------HHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc-hhh
Confidence 988632 1100 0013456677778888888877777777666 688899999998885 444
Q ss_pred hhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccc
Q 046265 254 VFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVG 308 (639)
Q Consensus 254 ~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~ 308 (639)
.+ .++|+.|++++|+++ .+|. +..+++|+.|++++|.++.
T Consensus 269 ~~--~~~L~~L~Ls~N~l~------------~~~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 269 GL--PAKLRVLDLSSNRLN------------RAPQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CC--CSCCSCEECCSCCCC------------SCCC-TTSCCCCSCEECSSTTTSC
T ss_pred hh--cCCCCEEECCCCcCC------------CCch-hhhCCCccEEECcCCCCCC
Confidence 43 278888887777763 2233 4667888999999998863
No 335
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=7.6e-23 Score=204.79 Aligned_cols=146 Identities=18% Similarity=0.216 Sum_probs=115.4
Q ss_pred HHHHHHHhccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCCh----------------hhHHHHHHHHHHHhcc
Q 046265 457 YEEVIRATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDM----------------VVQQAFSNEIKALTEL 520 (639)
Q Consensus 457 ~~~~~~~~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~e~~~l~~l 520 (639)
..........|+..+.||+|+||.||+|...+|+.||||.++...... .....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 344445555666779999999999999987889999999997532111 1356789999999999
Q ss_pred ccCceeeeEEEEEcCCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCe
Q 046265 521 RHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNV 600 (639)
Q Consensus 521 ~H~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Ni 600 (639)
+| +++++++.. +..|+||||+++|+|.+ +.. .....++.|+++|++|+|.. +|+||||||+||
T Consensus 162 ~~---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NI 224 (282)
T 1zar_A 162 QG---LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNV 224 (282)
T ss_dssp TT---SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSE
T ss_pred cC---CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHE
Confidence 84 555555433 56799999999999998 421 12346899999999999998 999999999999
Q ss_pred eeCCCCceEEccccccccCC
Q 046265 601 LLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 601 ll~~~~~~kl~DfGla~~~~ 620 (639)
+++ ++.+||+|||+|+...
T Consensus 225 Ll~-~~~vkl~DFG~a~~~~ 243 (282)
T 1zar_A 225 LVS-EEGIWIIDFPQSVEVG 243 (282)
T ss_dssp EEE-TTEEEECCCTTCEETT
T ss_pred EEE-CCcEEEEECCCCeECC
Confidence 999 9999999999998653
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=1.3e-21 Score=191.32 Aligned_cols=186 Identities=23% Similarity=0.249 Sum_probs=111.1
Q ss_pred CccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeeccc-CccccCccccCCCCCCcccCCCCCcccCCCC
Q 046265 42 LSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNG-LSGWLPSSFGNLNNLAIGSMPNSLSNLTSLS 120 (639)
Q Consensus 42 l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~ 120 (639)
++ .+|. +. ++|++|++++|++++..+..|.++++|++|++++|+ +++..+..|.++++|
T Consensus 23 l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L---------------- 82 (239)
T 2xwt_C 23 IQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKV---------------- 82 (239)
T ss_dssp CS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTC----------------
T ss_pred cc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCC----------------
Confidence 44 4565 43 377888888888876555577788888888888886 776555566666533
Q ss_pred ccEEEccC-CcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCccc---EEEcccC-cCCccCCccCcCCCCCCe
Q 046265 121 LFHLDLSE-NQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLL---SLGFDLN-LLNGVLPPSISNLSNLEG 195 (639)
Q Consensus 121 L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~p~~~~~l~~L~~ 195 (639)
++|++++ |++++..+..|.++++|++|++++|++++ +|. +..+++|+ .|++++| .+++..+..|..
T Consensus 83 -~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~------ 153 (239)
T 2xwt_C 83 -THIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQG------ 153 (239)
T ss_dssp -CEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTT------
T ss_pred -cEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccc------
Confidence 4777777 77776555677777777777777777765 554 66666666 7777776 665444433332
Q ss_pred EEccCCccccccccccCCc-EEEcCCcccCCCCCccccCCCCCceecccccc-ccCcchhhhhcC-CCccEEeccCCcc
Q 046265 196 LYLYSSLVSAEIGNLLQLI-ELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNH-LTGNIYEVFGIY-PNLTFLDLSQNNF 271 (639)
Q Consensus 196 L~l~~~~~~~~~~~l~~L~-~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l 271 (639)
+++|+ .|++++|++. .+|......++|+.|++++|+ +++..+..|..+ ++|+.|++++|++
T Consensus 154 --------------l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l 217 (239)
T 2xwt_C 154 --------------LCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSV 217 (239)
T ss_dssp --------------TBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCC
T ss_pred --------------hhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcc
Confidence 33344 4444555554 233222222555555555553 554444445544 5555555444433
No 337
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=1.8e-21 Score=201.80 Aligned_cols=90 Identities=18% Similarity=0.186 Sum_probs=40.5
Q ss_pred EEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCc-ccCCCCCCCE-Eeeec
Q 046265 10 QVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPR-EVGQLSSLKQ-LVLYC 87 (639)
Q Consensus 10 ~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~-L~L~~ 87 (639)
.|+-++++++ .+|..+ .+++++|+|++|+|+.+.+.+|.+|++|++|+|++|++.+.+|. .|.++++|++ +.+..
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 3444444443 344444 23455555555555533334455555555555555554433332 3444444433 33334
Q ss_pred ccCccccCccccCCC
Q 046265 88 NGLSGWLPSSFGNLN 102 (639)
Q Consensus 88 N~l~~~~p~~~~~l~ 102 (639)
|+++...|..|..++
T Consensus 90 N~l~~l~~~~f~~l~ 104 (350)
T 4ay9_X 90 NNLLYINPEAFQNLP 104 (350)
T ss_dssp TTCCEECTTSBCCCT
T ss_pred CcccccCchhhhhcc
Confidence 444444444444333
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=1.4e-23 Score=220.82 Aligned_cols=247 Identities=18% Similarity=0.202 Sum_probs=175.1
Q ss_pred cCCccccCCCCCCEEECcCCCCccC----CCCCCCCCCCCCEEEcccC---cCCCCCCccc-------CCCCCCCEEeee
Q 046265 21 IIPPQIGNISNLKFLDMGNNQLSGV----IPQEIDPLTHLKHLYINVN---KLRGSVPREV-------GQLSSLKQLVLY 86 (639)
Q Consensus 21 ~~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~L~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~L~ 86 (639)
.++..+..+++|++|+|++|.++.. ++..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 5667778888899999999988765 3445778889999999885 4444556555 678888888888
Q ss_pred cccCcc----ccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCcccc----CC---------CCCCEEe
Q 046265 87 CNGLSG----WLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLG----HL---------SNLAVLH 149 (639)
Q Consensus 87 ~N~l~~----~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~ 149 (639)
+|.+++ .+|..+..+++| ++|+|++|.++...+..+. .+ ++|++|+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L-----------------~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~ 165 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPL-----------------EHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSII 165 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTC-----------------CEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEE
T ss_pred CCcCCHHHHHHHHHHHHhCCCC-----------------CEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEE
Confidence 888876 355566555532 5888888888644443333 33 7888888
Q ss_pred ccCCCCC-CCCC---ccccCCCcccEEEcccCcCC--c---cCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCC
Q 046265 150 LGDNSLF-GSIP---PILGKVQSLLSLGFDLNLLN--G---VLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDN 220 (639)
Q Consensus 150 L~~N~l~-~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~ 220 (639)
|++|+++ +.+| ..+..+++|+.|++++|.++ | ..|. .+..+++|+.|++++
T Consensus 166 L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~--------------------~l~~~~~L~~L~Ls~ 225 (386)
T 2ca6_A 166 CGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLE--------------------GLAYCQELKVLDLQD 225 (386)
T ss_dssp CCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHT--------------------TGGGCTTCCEEECCS
T ss_pred CCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHH--------------------HhhcCCCccEEECcC
Confidence 8888886 3444 35667778888888888776 2 1222 344556677777777
Q ss_pred cccC----CCCCccccCCCCCceeccccccccCc----chhhhhc--CCCccEEeccCCcccccccCcCCccccccCccc
Q 046265 221 KQLF----GQIPKSLRNFTSLNIVHLEQNHLTGN----IYEVFGI--YPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKI 290 (639)
Q Consensus 221 n~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~--l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~ 290 (639)
|.+. +.+|..+..+++|+.|+|++|.+++. ++..+.. +++|+.|+|++|.+.+. . ...+|..+
T Consensus 226 n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~------g-~~~l~~~l 298 (386)
T 2ca6_A 226 NTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELD------A-VRTLKTVI 298 (386)
T ss_dssp SCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHH------H-HHHHHHHH
T ss_pred CCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHH------H-HHHHHHHH
Confidence 7775 55777888889999999999998875 4556633 88999999777766320 0 00367766
Q ss_pred -cCCCCCCEEeccCCcccccCC
Q 046265 291 -GKLYQLHKLDFSLNHIVGELP 311 (639)
Q Consensus 291 -~~l~~L~~L~Ls~N~~~~~~p 311 (639)
.++++|+.|++++|.+++..|
T Consensus 299 ~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 299 DEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHCTTCCEEECTTSBSCTTSH
T ss_pred HhcCCCceEEEccCCcCCcchh
Confidence 557899999999999987654
No 339
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=1e-23 Score=219.88 Aligned_cols=237 Identities=20% Similarity=0.187 Sum_probs=177.0
Q ss_pred eeEEEEeCCCcccccCC----ccccCCC-CCCEEECcCCCCccCCCCCCCCC-----CCCCEEEcccCcCCCCCCcccC-
Q 046265 7 FFFQVVHESNTLFAIIP----PQIGNIS-NLKFLDMGNNQLSGVIPQEIDPL-----THLKHLYINVNKLRGSVPREVG- 75 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p----~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~L-----~~L~~L~L~~N~l~~~~p~~~~- 75 (639)
.+..+++++|++.+..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|++|+|++|++++..+..+.
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 36789999999998887 7788898 99999999999998777777775 9999999999999976666444
Q ss_pred ---CC-CCCCEEeeecccCccccCccccCC-CCCCcccCCCCCcccCCCCccEEEccCCcCcccC----CccccCCC-CC
Q 046265 76 ---QL-SSLKQLVLYCNGLSGWLPSSFGNL-NNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSI----PHFLGHLS-NL 145 (639)
Q Consensus 76 ---~l-~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~----p~~~~~l~-~L 145 (639)
.+ ++|++|+|++|++++..+..+... ..+ .+ +|++|+|++|+++... +..+..++ +|
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~-----------~~--~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 169 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNL-----------PA--SITSLNLRGNDLGIKSSDELIQILAAIPANV 169 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTS-----------CT--TCCEEECTTSCGGGSCHHHHHHHHHTSCTTC
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhC-----------CC--ceeEEEccCCcCCHHHHHHHHHHHhcCCccc
Confidence 44 899999999999987666555431 100 01 2369999999998533 44456665 99
Q ss_pred CEEeccCCCCCCCCCcccc----CC-CcccEEEcccCcCCccCCccCcCCCCCCeEEccCCcccccccc-ccCCcEEEcC
Q 046265 146 AVLHLGDNSLFGSIPPILG----KV-QSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGN-LLQLIELEID 219 (639)
Q Consensus 146 ~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~-l~~L~~L~l~ 219 (639)
++|+|++|++++..+..+. .. ++|+.|++++|.++...... ++..+.. .++|+.|+++
T Consensus 170 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~----------------l~~~l~~~~~~L~~L~Ls 233 (362)
T 3goz_A 170 NSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAE----------------LAYIFSSIPNHVVSLNLC 233 (362)
T ss_dssp CEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHH----------------HHHHHHHSCTTCCEEECC
T ss_pred cEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHH----------------HHHHHhcCCCCceEEECc
Confidence 9999999999877665444 44 69999999999987532111 1223333 3478888888
Q ss_pred CcccCCCCC----ccccCCCCCceeccccccccCcchh-------hhhcCCCccEEeccCCccc
Q 046265 220 NKQLFGQIP----KSLRNFTSLNIVHLEQNHLTGNIYE-------VFGIYPNLTFLDLSQNNFY 272 (639)
Q Consensus 220 ~n~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~~~-------~~~~l~~L~~L~Ls~N~l~ 272 (639)
+|.+.+..+ ..+..+++|+.|++++|.+.+..+. .+..+++|+.||+++|.+.
T Consensus 234 ~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 234 LNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp SSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCC
T ss_pred CCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCC
Confidence 888876544 3456789999999999996654433 4566778889998777663
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=4.7e-21 Score=188.89 Aligned_cols=181 Identities=23% Similarity=0.268 Sum_probs=136.1
Q ss_pred CCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccC
Q 046265 30 SNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSM 109 (639)
Q Consensus 30 ~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~l 109 (639)
...++++++++.++ .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----- 85 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTEL----- 85 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC-----
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcC-----
Confidence 35678999999987 6777665 588999999999987777788889999999999998887777777766633
Q ss_pred CCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcC
Q 046265 110 PNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISN 189 (639)
Q Consensus 110 p~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 189 (639)
++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|.+++..+..|..
T Consensus 86 ------------~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 153 (251)
T 3m19_A 86 ------------GTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDK 153 (251)
T ss_dssp ------------CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ------------CEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCc
Confidence 48888888888776777888888888888888888766666788888888888888887655544443
Q ss_pred CCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCc
Q 046265 190 LSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGN 250 (639)
Q Consensus 190 l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 250 (639)
+ ++|+.|++++|++.+..|..+..+++|+.|++++|.+++.
T Consensus 154 l--------------------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 154 L--------------------TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp C--------------------TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred C--------------------cCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 3 3444555566666665555666677777777777776654
No 341
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=2.5e-21 Score=200.68 Aligned_cols=250 Identities=21% Similarity=0.178 Sum_probs=180.1
Q ss_pred cccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccC-ccccCCCC
Q 046265 25 QIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLP-SSFGNLNN 103 (639)
Q Consensus 25 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~ 103 (639)
.++.+.. ++++.++++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+| ..|.++.+
T Consensus 5 ~~C~C~~-~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~ 80 (350)
T 4ay9_X 5 RICHCSN-RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80 (350)
T ss_dssp SSSEEET-TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTT
T ss_pred CccEeeC-CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchh
Confidence 3444432 67899999998 678777 3689999999999995445579999999999999999877665 46677765
Q ss_pred CCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEccc-CcCCcc
Q 046265 104 LAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDL-NLLNGV 182 (639)
Q Consensus 104 L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~ 182 (639)
+. ..++++.|+++...|..|..+++|++|++++|++.+..+..+....++..+++.+ |.+...
T Consensus 81 l~----------------~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l 144 (350)
T 4ay9_X 81 LH----------------EIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTI 144 (350)
T ss_dssp CC----------------EEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEE
T ss_pred hh----------------hhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccc
Confidence 43 4678888999988889999999999999999999987777777788889999865 567655
Q ss_pred CCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceecccc-ccccCcchhhhhcCCCc
Q 046265 183 LPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQ-NHLTGNIYEVFGIYPNL 261 (639)
Q Consensus 183 ~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L 261 (639)
.+..|..+. ..++.|++++|++.. +|......++|+.|++++ |.++...+++|..+++|
T Consensus 145 ~~~~f~~~~-------------------~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L 204 (350)
T 4ay9_X 145 ERNSFVGLS-------------------FESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGP 204 (350)
T ss_dssp CTTSSTTSB-------------------SSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECC
T ss_pred cccchhhcc-------------------hhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCccc
Confidence 555554432 245567777777754 444444556777777764 66776666677778888
Q ss_pred cEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCcc
Q 046265 262 TFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNK 329 (639)
Q Consensus 262 ~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~ 329 (639)
++|++++|+++ .+|.. .+.+|+.|.+.++.-...+| .+..+++|+.++++++.
T Consensus 205 ~~LdLs~N~l~------------~lp~~--~~~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 205 VILDISRTRIH------------SLPSY--GLENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp SEEECTTSCCC------------CCCSS--SCTTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHH
T ss_pred chhhcCCCCcC------------ccChh--hhccchHhhhccCCCcCcCC-CchhCcChhhCcCCCCc
Confidence 88887776662 44542 23455555554444334666 36778888888887654
No 342
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=6.5e-23 Score=211.51 Aligned_cols=255 Identities=16% Similarity=0.161 Sum_probs=162.9
Q ss_pred CCCEEECcCCCCccCCCCCCCCC--CCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccc-cCccccCCCCCCcc
Q 046265 31 NLKFLDMGNNQLSGVIPQEIDPL--THLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGW-LPSSFGNLNNLAIG 107 (639)
Q Consensus 31 ~L~~L~Ls~n~l~~~~p~~~~~L--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~~ 107 (639)
.++.|++++|.+. |..+..+ ++++.|++++|.+++..+. +..+++|++|++++|.+++. +|..+..+++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L--- 120 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKL--- 120 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCC---
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCC---
Confidence 3667777777665 4455566 6777777777777754443 55677777777777776654 55555555422
Q ss_pred cCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCC-CCCC-CCCccccCCCcccEEEcccC-cCCcc-C
Q 046265 108 SMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDN-SLFG-SIPPILGKVQSLLSLGFDLN-LLNGV-L 183 (639)
Q Consensus 108 ~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~-~~p~~~~~l~~L~~L~l~~N-~l~~~-~ 183 (639)
++|+|++|.+++..|..++.+++|++|+|++| .+++ .+|..+..+++|++|++++| .+++. +
T Consensus 121 --------------~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~ 186 (336)
T 2ast_B 121 --------------QNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHV 186 (336)
T ss_dssp --------------SEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHH
T ss_pred --------------CEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHH
Confidence 47777777777666777777777777777777 5554 24555666777777777777 66542 2
Q ss_pred CccCcCCCCCCeEEccCCcccccccccc-CCcEEEcCCc--ccC-CCCCccccCCCCCceecccccc-ccCcchhhhhcC
Q 046265 184 PPSISNLSNLEGLYLYSSLVSAEIGNLL-QLIELEIDNK--QLF-GQIPKSLRNFTSLNIVHLEQNH-LTGNIYEVFGIY 258 (639)
Q Consensus 184 p~~~~~l~~L~~L~l~~~~~~~~~~~l~-~L~~L~l~~n--~l~-~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l 258 (639)
+.. +..++ +|+.|++++| .+. +.+|..+..+++|+.|++++|. +++..+..+..+
T Consensus 187 ~~~--------------------~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l 246 (336)
T 2ast_B 187 QVA--------------------VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL 246 (336)
T ss_dssp HHH--------------------HHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGC
T ss_pred HHH--------------------HHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCC
Confidence 333 33444 5556666666 333 3455566677778888888777 666666677777
Q ss_pred CCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCC-CCCCeeeccCccCcccCCcC
Q 046265 259 PNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNL-KSLNYRALNGNKVYGSLPRV 337 (639)
Q Consensus 259 ~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l-~~L~~L~l~~N~l~~~~p~~ 337 (639)
++|+.|++++|.- ++......+..+++|+.|++++| +.. ..+..+ ..+..|++++|++++..|..
T Consensus 247 ~~L~~L~l~~~~~----------~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 247 NYLQHLSLSRCYD----------IIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp TTCCEEECTTCTT----------CCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred CCCCEeeCCCCCC----------CCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCc
Confidence 8888888776631 11111124566788888888887 332 223333 23666778888888888876
Q ss_pred ccC
Q 046265 338 LGS 340 (639)
Q Consensus 338 ~~~ 340 (639)
++.
T Consensus 313 ~~~ 315 (336)
T 2ast_B 313 IGN 315 (336)
T ss_dssp CSS
T ss_pred ccc
Confidence 654
No 343
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=3.4e-23 Score=217.99 Aligned_cols=137 Identities=20% Similarity=0.227 Sum_probs=88.0
Q ss_pred cCCcEEEcCCcccC-CCCC---ccccCCCCCceeccccccccC-----cchhhhhcCCCccEEeccCCcccccccCcCCc
Q 046265 211 LQLIELEIDNKQLF-GQIP---KSLRNFTSLNIVHLEQNHLTG-----NIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNN 281 (639)
Q Consensus 211 ~~L~~L~l~~n~l~-~~~p---~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~ 281 (639)
++|+.|++++|++. +.+| ..+..+++|+.|++++|.++. ..+..+..+++|+.|+|++|.++..
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~------- 231 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHL------- 231 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHH-------
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcH-------
Confidence 45555666666554 2333 345566677777777776662 2233566677777777666654210
Q ss_pred cccccCccccCCCCCCEEeccCCccccc----CCcccc--CCCCCCeeeccCccCcc----cCCcCc-cCCCCCCEEeCC
Q 046265 282 ITRSIPPKIGKLYQLHKLDFSLNHIVGE----LPIELG--NLKSLNYRALNGNKVYG----SLPRVL-GSISDLEYLDLS 350 (639)
Q Consensus 282 ~~~~~p~~~~~l~~L~~L~Ls~N~~~~~----~p~~~~--~l~~L~~L~l~~N~l~~----~~p~~~-~~l~~L~~L~Ls 350 (639)
-.+.+|..+..+++|+.|+|++|.+.+. +|..+. .+++|+.|+|++|.+++ .+|..+ .++++|+.|+++
T Consensus 232 g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~ 311 (386)
T 2ca6_A 232 GSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELN 311 (386)
T ss_dssp HHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECT
T ss_pred HHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEcc
Confidence 0034566677777788888888877654 455553 37888888888888876 477666 567889999998
Q ss_pred CCCC
Q 046265 351 TNYN 354 (639)
Q Consensus 351 ~N~~ 354 (639)
+|++
T Consensus 312 ~N~l 315 (386)
T 2ca6_A 312 GNRF 315 (386)
T ss_dssp TSBS
T ss_pred CCcC
Confidence 8543
No 344
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.85 E-value=3.5e-24 Score=238.74 Aligned_cols=259 Identities=14% Similarity=0.101 Sum_probs=125.5
Q ss_pred CCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccC-------cCCccCCccCcCCCCCCeEE-cc---CCcccccccc
Q 046265 141 HLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLN-------LLNGVLPPSISNLSNLEGLY-LY---SSLVSAEIGN 209 (639)
Q Consensus 141 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N-------~l~~~~p~~~~~l~~L~~L~-l~---~~~~~~~~~~ 209 (639)
++++|++|+|++|...+.+|..+..+++|+.|+++.+ .+.+ ++..+.++++|+.+. +. ...++..+..
T Consensus 209 ~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~ 287 (594)
T 2p1m_B 209 RCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVPAYLPAVYSV 287 (594)
T ss_dssp HCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCGGGGGGGHHH
T ss_pred hCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccchhhHHHHHHh
Confidence 3466666666655222224555555566666664332 2222 223455666666662 22 1223333446
Q ss_pred ccCCcEEEcCCcccCCCC-CccccCCCCCceeccccccccC-cchhhhhcCCCccEEeccCCcccccccCcCCccccccC
Q 046265 210 LLQLIELEIDNKQLFGQI-PKSLRNFTSLNIVHLEQNHLTG-NIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIP 287 (639)
Q Consensus 210 l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p 287 (639)
+++|+.|++++|.+.+.. +..+..+++|+.|++++| ++. ..+.....+++|+.|+++++.-.| ..+.+.++....
T Consensus 288 ~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g--~~~~~~l~~~~l 364 (594)
T 2p1m_B 288 CSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFV--MEPNVALTEQGL 364 (594)
T ss_dssp HTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTC--SSCSSCCCHHHH
T ss_pred hCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccc--cccCCCCCHHHH
Confidence 778888888888864432 223567888888888887 432 223334457888888874321100 011122222111
Q ss_pred ccc-cCCCCCCEEeccCCcccccCCcccc-CCCCCCeeecc--C----ccCcc-----cCCcCccCCCCCCEEeCCCCCC
Q 046265 288 PKI-GKLYQLHKLDFSLNHIVGELPIELG-NLKSLNYRALN--G----NKVYG-----SLPRVLGSISDLEYLDLSTNYN 354 (639)
Q Consensus 288 ~~~-~~l~~L~~L~Ls~N~~~~~~p~~~~-~l~~L~~L~l~--~----N~l~~-----~~p~~~~~l~~L~~L~Ls~N~~ 354 (639)
..+ ..+++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.++. .++..+..+++|+.|++++
T Consensus 365 ~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~--- 441 (594)
T 2p1m_B 365 VSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG--- 441 (594)
T ss_dssp HHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS---
T ss_pred HHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC---
Confidence 112 1245566666655655544333333 35566666665 2 33331 1111234455666666644
Q ss_pred CcccccCChhhhc-cccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCeee
Q 046265 355 NEFRKEFPVELEK-LVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNELR 416 (639)
Q Consensus 355 ~~~~~~~p~~~~~-l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l~ 416 (639)
.+....+..+.. +++|+.|+++.|.+++.. .......+++|+.|++++|.++
T Consensus 442 -~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~---------~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 442 -LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLG---------MHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp -SCCHHHHHHHHHHCTTCCEEEEESCCSSHHH---------HHHHHHHCTTCCEEEEESCSCC
T ss_pred -cccHHHHHHHHHhchhccEeeccCCCCcHHH---------HHHHHhcCCCcCEEECcCCCCc
Confidence 112222222332 455666666555443211 0111234555666666666553
No 345
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.85 E-value=3.2e-21 Score=196.40 Aligned_cols=200 Identities=18% Similarity=0.161 Sum_probs=157.9
Q ss_pred CCCCCCEEECcCCCCccCCCCCC--CCCCCCCEEEcccCcCCCCCC----cccCCCCCCCEEeeecccCccccCccccCC
Q 046265 28 NISNLKFLDMGNNQLSGVIPQEI--DPLTHLKHLYINVNKLRGSVP----REVGQLSSLKQLVLYCNGLSGWLPSSFGNL 101 (639)
Q Consensus 28 ~l~~L~~L~Ls~n~l~~~~p~~~--~~L~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 101 (639)
.+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..|+.+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 35679999999999988888888 889999999999999887555 345678899999999999988777777777
Q ss_pred CCCCcccCCCCCcccCCCCccEEEccCCcCccc--C--CccccCCCCCCEEeccCCCCCCCCCc----cccCCCcccEEE
Q 046265 102 NNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGS--I--PHFLGHLSNLAVLHLGDNSLFGSIPP----ILGKVQSLLSLG 173 (639)
Q Consensus 102 ~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~ 173 (639)
++| ++|+|++|++.+. + +..+..+++|++|+|++|+++. +|. .++.+++|++|+
T Consensus 169 ~~L-----------------~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~ 230 (310)
T 4glp_A 169 PAL-----------------TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLD 230 (310)
T ss_dssp TTC-----------------CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEE
T ss_pred CCC-----------------CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEE
Confidence 643 5889999987642 2 2334678889999999998863 333 256778999999
Q ss_pred cccCcCCccCCccCcCC---CCCCeEEccCCccc---cccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccc
Q 046265 174 FDLNLLNGVLPPSISNL---SNLEGLYLYSSLVS---AEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHL 247 (639)
Q Consensus 174 l~~N~l~~~~p~~~~~l---~~L~~L~l~~~~~~---~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 247 (639)
+++|.+++..|..+..+ ++|+.|+++.|.+. ..+. ++|+.|++++|++.+. |. +..+++|+.|++++|.+
T Consensus 231 Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l 306 (310)
T 4glp_A 231 LSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPF 306 (310)
T ss_dssp CTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTT
T ss_pred CCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCC
Confidence 99999988878777776 58999999876543 3332 6899999999999864 43 67889999999999998
Q ss_pred cC
Q 046265 248 TG 249 (639)
Q Consensus 248 ~~ 249 (639)
+.
T Consensus 307 ~~ 308 (310)
T 4glp_A 307 LV 308 (310)
T ss_dssp SC
T ss_pred CC
Confidence 74
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=9.6e-21 Score=192.53 Aligned_cols=194 Identities=24% Similarity=0.338 Sum_probs=149.3
Q ss_pred ccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCC
Q 046265 26 IGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLA 105 (639)
Q Consensus 26 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 105 (639)
+..+++|++|++++|.++. +| .+..+++|++|+|++|++++ ++. +..+++|++|+|++|++++. + .+..++
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~-~-~~~~l~--- 107 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV-S-AIAGLQ--- 107 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC-G-GGTTCT---
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc-h-hhcCCC---
Confidence 4567889999999999974 55 68899999999999999984 555 89999999999999998853 2 455554
Q ss_pred cccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCc
Q 046265 106 IGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPP 185 (639)
Q Consensus 106 ~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 185 (639)
+| ++|++++|++++ +|. +..+++|++|++++|.+++..+ ++.+++|+.|++++|.+++..+
T Consensus 108 ------------~L--~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~- 168 (308)
T 1h6u_A 108 ------------SI--KTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP- 168 (308)
T ss_dssp ------------TC--CEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-
T ss_pred ------------CC--CEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh-
Confidence 33 589999999985 444 8889999999999999986433 8889999999999998875322
Q ss_pred cCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEe
Q 046265 186 SISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLD 265 (639)
Q Consensus 186 ~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 265 (639)
+.. +++|+.|++++|++.+..+ +..+++|+.|++++|++++..+ +..+++|+.|+
T Consensus 169 -l~~--------------------l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~ 223 (308)
T 1h6u_A 169 -LAN--------------------LSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVT 223 (308)
T ss_dssp -GTT--------------------CTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEE
T ss_pred -hcC--------------------CCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEE
Confidence 444 4556666667777755433 6778888888888888887653 67788888888
Q ss_pred ccCCccc
Q 046265 266 LSQNNFY 272 (639)
Q Consensus 266 Ls~N~l~ 272 (639)
+++|.++
T Consensus 224 l~~N~i~ 230 (308)
T 1h6u_A 224 LTNQTIT 230 (308)
T ss_dssp EEEEEEE
T ss_pred ccCCeee
Confidence 7777764
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=2.7e-20 Score=177.84 Aligned_cols=186 Identities=24% Similarity=0.223 Sum_probs=110.3
Q ss_pred cceeeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCE
Q 046265 3 CLAFFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQ 82 (639)
Q Consensus 3 ~~~~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 82 (639)
|.|. ...++.+.+++. .+|..+ .++|++|++++|.+++..+..|..+++|++|++++|++++..+..|..+++|++
T Consensus 5 C~C~-~~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 80 (208)
T 2o6s_A 5 CSCS-GTTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTY 80 (208)
T ss_dssp CEEE-TTEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CEEC-CCEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCE
Confidence 5552 345555555554 345444 346777777777777655556677777777777777776544445666777777
Q ss_pred EeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCcc
Q 046265 83 LVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPI 162 (639)
Q Consensus 83 L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 162 (639)
|++++|++++..+..|.++++| ++|++++|++++..+..|..+++|++|+|++|++++..+..
T Consensus 81 L~Ls~n~l~~~~~~~~~~l~~L-----------------~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 143 (208)
T 2o6s_A 81 LNLSTNQLQSLPNGVFDKLTQL-----------------KELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGV 143 (208)
T ss_dssp EECCSSCCCCCCTTTTTTCTTC-----------------CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred EECCCCcCCccCHhHhcCccCC-----------------CEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHH
Confidence 7777776665444444444422 36666666666554555566666666666666666544444
Q ss_pred ccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCC
Q 046265 163 LGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTS 236 (639)
Q Consensus 163 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 236 (639)
+..+++|+.|++++|.+.+ .++.|+.|+++.|++.|.+|.++++++.
T Consensus 144 ~~~l~~L~~L~l~~N~~~~---------------------------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 144 FDRLTSLQYIWLHDNPWDC---------------------------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTCTTCCEEECCSCCBCC---------------------------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred hccCCCccEEEecCCCeec---------------------------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 5556666666666554432 2233455555666666666666655543
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.84 E-value=3.8e-22 Score=205.74 Aligned_cols=256 Identities=20% Similarity=0.215 Sum_probs=177.1
Q ss_pred CCCEEEcccCcCCCCCCcccCCC--CCCCEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCc
Q 046265 55 HLKHLYINVNKLRGSVPREVGQL--SSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLS 132 (639)
Q Consensus 55 ~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~ 132 (639)
.++.+++++|.+. |..+..+ ++++.|++++|.+++..+. +..++ +| ++|++++|.++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~---------------~L--~~L~L~~~~l~ 106 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPF---------------RV--QHMDLSNSVIE 106 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCB---------------CC--CEEECTTCEEC
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCC---------------CC--CEEEccCCCcC
Confidence 4677888877765 4555655 6777777777777765444 22233 22 57777777776
Q ss_pred cc-CCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccC-cCCccCCccCcCCCCCCeEEccCCccccccccc
Q 046265 133 GS-IPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLN-LLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNL 210 (639)
Q Consensus 133 ~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l 210 (639)
+. +|..+..+++|++|+|++|.+++..|..++.+++|++|++++| .+++. .++..+..+
T Consensus 107 ~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~-------------------~l~~~~~~~ 167 (336)
T 2ast_B 107 VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEF-------------------ALQTLLSSC 167 (336)
T ss_dssp HHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHH-------------------HHHHHHHHC
T ss_pred HHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHH-------------------HHHHHHhcC
Confidence 54 6667777777777777777776666666777777777777777 45431 012234566
Q ss_pred cCCcEEEcCCc-ccCCC-CCccccCCC-CCceeccccc--ccc-CcchhhhhcCCCccEEeccCCcccccccCcCCcccc
Q 046265 211 LQLIELEIDNK-QLFGQ-IPKSLRNFT-SLNIVHLEQN--HLT-GNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITR 284 (639)
Q Consensus 211 ~~L~~L~l~~n-~l~~~-~p~~~~~l~-~L~~L~L~~N--~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~ 284 (639)
++|++|++++| .+.+. +|..+..++ +|++|++++| .++ +.++..+..+++|+.|++++|.+ +++
T Consensus 168 ~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~----------l~~ 237 (336)
T 2ast_B 168 SRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM----------LKN 237 (336)
T ss_dssp TTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT----------CCG
T ss_pred CCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCc----------CCH
Confidence 77888888888 77654 577788899 9999999999 555 45677888999999999887762 234
Q ss_pred ccCccccCCCCCCEEeccCCc-ccccCCccccCCCCCCeeeccCccCcccCCcCccCC-CCCCEEeCCCCCCCcccccCC
Q 046265 285 SIPPKIGKLYQLHKLDFSLNH-IVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSI-SDLEYLDLSTNYNNEFRKEFP 362 (639)
Q Consensus 285 ~~p~~~~~l~~L~~L~Ls~N~-~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~~~~~~~~~p 362 (639)
..+..+..+++|+.|++++|. +.......+..+++|+.|++++| +.. ..+..+ ..+..|++++| .+.+..|
T Consensus 238 ~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n---~l~~~~~ 310 (336)
T 2ast_B 238 DCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCS---HFTTIAR 310 (336)
T ss_dssp GGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCC---CSCCTTC
T ss_pred HHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecc---cCccccC
Confidence 566788889999999999995 32222235888999999999998 432 233333 23667778884 5556666
Q ss_pred hhhhc
Q 046265 363 VELEK 367 (639)
Q Consensus 363 ~~~~~ 367 (639)
..+..
T Consensus 311 ~~~~~ 315 (336)
T 2ast_B 311 PTIGN 315 (336)
T ss_dssp SSCSS
T ss_pred Ccccc
Confidence 65543
No 349
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.83 E-value=5.9e-23 Score=228.85 Aligned_cols=360 Identities=14% Similarity=0.095 Sum_probs=174.6
Q ss_pred cCCCCCCEEECcCCCCccCCCCCCC-CCCCCCEEEcccC-cCCCC-CCcccCCCCCCCEEeeecccCccccCcccc----
Q 046265 27 GNISNLKFLDMGNNQLSGVIPQEID-PLTHLKHLYINVN-KLRGS-VPREVGQLSSLKQLVLYCNGLSGWLPSSFG---- 99 (639)
Q Consensus 27 ~~l~~L~~L~Ls~n~l~~~~p~~~~-~L~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~---- 99 (639)
..+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+.
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 3567788888888877765555554 5778888888777 44422 333444677888888887776654433333
Q ss_pred CCCCCCcccCCC--------C----CcccCCCCccEEEccCC-cCcccCCccccCCCCCCEEeccCCC-------CCCCC
Q 046265 100 NLNNLAIGSMPN--------S----LSNLTSLSLFHLDLSEN-QLSGSIPHFLGHLSNLAVLHLGDNS-------LFGSI 159 (639)
Q Consensus 100 ~l~~L~~~~lp~--------~----~~~l~~L~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~-------l~~~~ 159 (639)
.+++|+...+.. . ..++++| ++|++++| .++ .+|..+..+++|+.|+++.+. +.+ +
T Consensus 182 ~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L--~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l 257 (594)
T 2p1m_B 182 TYTSLVSLNISCLASEVSFSALERLVTRCPNL--KSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSG-L 257 (594)
T ss_dssp TCCCCCEEECTTCCSCCCHHHHHHHHHHCTTC--CEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-H
T ss_pred cCCcCcEEEecccCCcCCHHHHHHHHHhCCCC--cEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHH-H
Confidence 333444211111 1 1223555 78999988 444 477888888999999866553 221 2
Q ss_pred CccccCCCcccEE-EcccCcCCccCCccCcCCCCCCeEEccCCcccc-----ccccccCCcEEEcCCcccCCCCCccccC
Q 046265 160 PPILGKVQSLLSL-GFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSA-----EIGNLLQLIELEIDNKQLFGQIPKSLRN 233 (639)
Q Consensus 160 p~~~~~l~~L~~L-~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 233 (639)
+..+.++++|+.| .+.... .+.+|..+..+++|+.|+++.+.+.. .+..+++|+.|++++|.-...++.....
T Consensus 258 ~~~l~~~~~L~~Ls~~~~~~-~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~~~~l~~l~~~ 336 (594)
T 2p1m_B 258 SVALSGCKELRCLSGFWDAV-PAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLAST 336 (594)
T ss_dssp HHHHHTCTTCCEEECCBTCC-GGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHH
T ss_pred HHHHhcCCCcccccCCcccc-hhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCccCHHHHHHHHHh
Confidence 2244555555555 222211 12233333345555566555443321 1334555666665555111111112223
Q ss_pred CCCCceeccc---------cccccCcchhhh-hcCCCccEEeccCCcccccccCcCCccccccCcccc-CCCCCCEEecc
Q 046265 234 FTSLNIVHLE---------QNHLTGNIYEVF-GIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIG-KLYQLHKLDFS 302 (639)
Q Consensus 234 l~~L~~L~L~---------~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~-~l~~L~~L~Ls 302 (639)
+++|+.|++. .+.+++.....+ ..+++|+.|+++.|.++ +..+..+. .+++|+.|+++
T Consensus 337 ~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~-----------~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 337 CKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMT-----------NAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp CTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCC-----------HHHHHHHHHHCTTCCEEEEE
T ss_pred CCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcC-----------HHHHHHHHhhCCCcceeEee
Confidence 5555555552 233333222222 23555555554444332 22222222 24555555555
Q ss_pred --C----Cccccc-----CCccccCCCCCCeeeccCccCcccCCcCccC-CCCCCEEeCCCCCCCcccccCChhh-hccc
Q 046265 303 --L----NHIVGE-----LPIELGNLKSLNYRALNGNKVYGSLPRVLGS-ISDLEYLDLSTNYNNEFRKEFPVEL-EKLV 369 (639)
Q Consensus 303 --~----N~~~~~-----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~~~~~~~~~p~~~-~~l~ 369 (639)
+ |.+++. ++..+..+++|+.|++++ .++...+..++. +++|+.|++++|. +.+..+..+ ..++
T Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~---i~~~~~~~l~~~~~ 481 (594)
T 2p1m_B 406 IIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAG---DSDLGMHHVLSGCD 481 (594)
T ss_dssp ESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCC---SSHHHHHHHHHHCT
T ss_pred cccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCC---CcHHHHHHHHhcCC
Confidence 2 233211 111134455555555554 343333333332 5556666665532 221111222 3455
Q ss_pred cCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCCee
Q 046265 370 QLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYNEL 415 (639)
Q Consensus 370 ~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N~l 415 (639)
+|+.|++++|.+.+.. ....+..+++|+.|++++|++
T Consensus 482 ~L~~L~L~~n~~~~~~---------~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 482 SLRKLEIRDCPFGDKA---------LLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp TCCEEEEESCSCCHHH---------HHHTGGGGGGSSEEEEESSCC
T ss_pred CcCEEECcCCCCcHHH---------HHHHHHhCCCCCEEeeeCCCC
Confidence 5566666555442211 011233455566666666554
No 350
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.83 E-value=4.8e-20 Score=187.36 Aligned_cols=215 Identities=21% Similarity=0.323 Sum_probs=168.1
Q ss_pred CCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCC
Q 046265 32 LKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPN 111 (639)
Q Consensus 32 L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~ 111 (639)
+..+.+..+.++... .+..+++|++|++++|.++ .+| .+..+++|++|++++|++++..+ +..+++|
T Consensus 21 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L------- 87 (308)
T 1h6u_A 21 AIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKI------- 87 (308)
T ss_dssp HHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSC-------
T ss_pred HHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCC-------
Confidence 334456666665432 3567889999999999998 466 68899999999999999986444 6555532
Q ss_pred CCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCC
Q 046265 112 SLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLS 191 (639)
Q Consensus 112 ~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 191 (639)
++|+|++|++++ +| .+..+++|++|+|++|++++ +|. +..+++|++|++++|.+++..+
T Consensus 88 ----------~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~------- 146 (308)
T 1h6u_A 88 ----------TELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP------- 146 (308)
T ss_dssp ----------CEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-------
T ss_pred ----------CEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-------
Confidence 589999999985 44 68899999999999999986 443 8899999999999998875432
Q ss_pred CCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCcc
Q 046265 192 NLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNF 271 (639)
Q Consensus 192 ~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 271 (639)
+..+++|+.|++++|++.+. |. +..+++|+.|++++|.+++..+ +..+++|++|++++|++
T Consensus 147 ---------------l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l 207 (308)
T 1h6u_A 147 ---------------LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQI 207 (308)
T ss_dssp ---------------GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCC
T ss_pred ---------------ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCcc
Confidence 33556677788888888664 33 8899999999999999998665 88899999999888877
Q ss_pred cccccCcCCccccccCccccCCCCCCEEeccCCcccccCCcc
Q 046265 272 YGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIE 313 (639)
Q Consensus 272 ~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~ 313 (639)
. .++ .+..+++|+.|++++|.+++ .|..
T Consensus 208 ~------------~~~-~l~~l~~L~~L~l~~N~i~~-~~~~ 235 (308)
T 1h6u_A 208 S------------DVS-PLANTSNLFIVTLTNQTITN-QPVF 235 (308)
T ss_dssp C------------BCG-GGTTCTTCCEEEEEEEEEEC-CCEE
T ss_pred C------------ccc-cccCCCCCCEEEccCCeeec-CCee
Confidence 3 233 37889999999999999974 4443
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=6.1e-20 Score=200.38 Aligned_cols=118 Identities=32% Similarity=0.379 Sum_probs=76.5
Q ss_pred CCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCC
Q 046265 31 NLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMP 110 (639)
Q Consensus 31 ~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp 110 (639)
++++|+|++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~---------- 120 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA---------- 120 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT----------
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc----------
Confidence 67777777777765 565553 66777777777776 566 345677777777777765 444 332
Q ss_pred CCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCc
Q 046265 111 NSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPP 185 (639)
Q Consensus 111 ~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 185 (639)
+|++|+|++|++++ +|. .+++|++|+|++|++++ +|. .+++|+.|++++|.+++ +|.
T Consensus 121 ---------~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~ 177 (571)
T 3cvr_A 121 ---------SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE 177 (571)
T ss_dssp ---------TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC
T ss_pred ---------CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch
Confidence 12467777777765 555 46777777777777765 554 45677777777777765 444
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=1.7e-19 Score=172.23 Aligned_cols=162 Identities=24% Similarity=0.260 Sum_probs=137.2
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeee
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLY 86 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 86 (639)
.+..+++++|++.+..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 35678899999997777788999999999999999997766778999999999999999996666668999999999999
Q ss_pred cccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCC
Q 046265 87 CNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKV 166 (639)
Q Consensus 87 ~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 166 (639)
+|++++..+..|..+++| ++|++++|++++..+..+..+++|++|++++|.+.+ .+
T Consensus 109 ~N~l~~~~~~~~~~l~~L-----------------~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~ 164 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQL-----------------KDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TC 164 (208)
T ss_dssp SSCCCCCCTTTTTTCTTC-----------------CEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CT
T ss_pred CCcCcccCHhHhccCCcC-----------------CEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CC
Confidence 999997766667766633 589999999997767778899999999999998765 34
Q ss_pred CcccEEEcccCcCCccCCccCcCCCC
Q 046265 167 QSLLSLGFDLNLLNGVLPPSISNLSN 192 (639)
Q Consensus 167 ~~L~~L~l~~N~l~~~~p~~~~~l~~ 192 (639)
++|+.|+++.|.++|.+|.+++.++.
T Consensus 165 ~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 165 PGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCHHHHHHHHHhCCceeeccCccccC
Confidence 57899999999999999988876653
No 353
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.9e-19 Score=173.37 Aligned_cols=157 Identities=22% Similarity=0.282 Sum_probs=109.5
Q ss_pred cceeeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCE
Q 046265 3 CLAFFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQ 82 (639)
Q Consensus 3 ~~~~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 82 (639)
|.|.. ..++.+++++. .+|..+. ++|++|+|++|.|++..|..|..+++|++|+|++|++++..|..|.++++|++
T Consensus 9 C~C~~-~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~ 84 (220)
T 2v9t_B 9 CTCSN-NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNS 84 (220)
T ss_dssp SEEET-TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCE
T ss_pred CEECC-CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCE
Confidence 66643 45666666655 4566554 57777888888777666667777777777777777777666777777777777
Q ss_pred EeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCcc
Q 046265 83 LVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPI 162 (639)
Q Consensus 83 L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 162 (639)
|+|++|+++...+..|..+++| ++|+|++|++++..|..|..+++|++|+|++|++++..+..
T Consensus 85 L~Ls~N~l~~l~~~~f~~l~~L-----------------~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 147 (220)
T 2v9t_B 85 LVLYGNKITELPKSLFEGLFSL-----------------QLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGT 147 (220)
T ss_dssp EECCSSCCCCCCTTTTTTCTTC-----------------CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred EECCCCcCCccCHhHccCCCCC-----------------CEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHH
Confidence 7777777775554555555532 47777777777666777777777777777777777666666
Q ss_pred ccCCCcccEEEcccCcCC
Q 046265 163 LGKVQSLLSLGFDLNLLN 180 (639)
Q Consensus 163 ~~~l~~L~~L~l~~N~l~ 180 (639)
|..+++|+.|++++|.+.
T Consensus 148 ~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 148 FSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp TTTCTTCCEEECCSSCEE
T ss_pred HhCCCCCCEEEeCCCCcC
Confidence 777777777777777664
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=1.5e-19 Score=197.35 Aligned_cols=188 Identities=26% Similarity=0.279 Sum_probs=136.8
Q ss_pred CCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCccc
Q 046265 55 HLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGS 134 (639)
Q Consensus 55 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~ 134 (639)
+|+.|+|++|.+++ +|..+. ++|++|+|++|+|+ .+| ..++ + |++|+|++|++++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~---------------~--L~~L~Ls~N~l~~- 114 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPA---------------S--LEYLDACDNRLST- 114 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCT---------------T--CCEEECCSSCCSC-
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccC---------------C--CCEEEccCCCCCC-
Confidence 89999999999985 887774 78999999999998 555 2233 2 3689999999996
Q ss_pred CCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCc
Q 046265 135 IPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLI 214 (639)
Q Consensus 135 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~ 214 (639)
+|. +.. +|++|+|++|++++ +|. .+++|+.|++++|.+++ +|. . +++|+
T Consensus 115 ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~--------------------l~~L~ 163 (571)
T 3cvr_A 115 LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---L--------------------PTSLE 163 (571)
T ss_dssp CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---C--------------------CTTCC
T ss_pred cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---c--------------------CCCcC
Confidence 777 665 99999999999987 666 67899999999999886 443 2 23566
Q ss_pred EEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCc-------cEEeccCCcccccccCcCCccccccC
Q 046265 215 ELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNL-------TFLDLSQNNFYGSLNFSMNNITRSIP 287 (639)
Q Consensus 215 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-------~~L~Ls~N~l~~~l~ls~n~~~~~~p 287 (639)
.|++++|++.+ +|. +. ++|+.|+|++|.|+.. |. +.. +| +.|+|++|+| ..+|
T Consensus 164 ~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~l-p~-~~~--~L~~~~~~L~~L~Ls~N~l------------~~lp 223 (571)
T 3cvr_A 164 VLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESL-PA-VPV--RNHHSEETEIFFRCRENRI------------THIP 223 (571)
T ss_dssp EEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSC-CC-CC----------CCEEEECCSSCC------------CCCC
T ss_pred EEECCCCCCCC-cch-hh--CCCCEEECcCCCCCch-hh-HHH--hhhcccccceEEecCCCcc------------eecC
Confidence 67777777766 565 54 7788888888887743 33 332 45 6677665555 2466
Q ss_pred ccccCCCCCCEEeccCCcccccCCccccCCC
Q 046265 288 PKIGKLYQLHKLDFSLNHIVGELPIELGNLK 318 (639)
Q Consensus 288 ~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~ 318 (639)
..+..+++|+.|+|++|.+++.+|..+..++
T Consensus 224 ~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 224 ENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp GGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred HHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 6666677777777777777776666665543
No 355
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=1.7e-19 Score=173.81 Aligned_cols=158 Identities=22% Similarity=0.222 Sum_probs=104.4
Q ss_pred cceeeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCC-CCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCC
Q 046265 3 CLAFFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIP-QEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLK 81 (639)
Q Consensus 3 ~~~~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p-~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 81 (639)
|.|.. ..+++++|++. .+|..+. ..+++|+|++|.+++..| ..|..+++|++|+|++|+|++..|..|..+++|+
T Consensus 9 C~C~~-~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~ 84 (220)
T 2v70_A 9 CRCEG-TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVN 84 (220)
T ss_dssp CEEET-TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred CEECC-CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCC
Confidence 66643 35667766665 3565553 345677777777776544 3466777777777777777765555677777777
Q ss_pred EEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCc
Q 046265 82 QLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPP 161 (639)
Q Consensus 82 ~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 161 (639)
+|+|++|++++..|..|.++++| ++|+|++|++++..|..|..+++|++|+|++|++++..|.
T Consensus 85 ~L~Ls~N~l~~~~~~~~~~l~~L-----------------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 147 (220)
T 2v70_A 85 EILLTSNRLENVQHKMFKGLESL-----------------KTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG 147 (220)
T ss_dssp EEECCSSCCCCCCGGGGTTCSSC-----------------CEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT
T ss_pred EEECCCCccCccCHhHhcCCcCC-----------------CEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH
Confidence 77777777776666556555532 4677777777766666677777777777777777766666
Q ss_pred cccCCCcccEEEcccCcCCc
Q 046265 162 ILGKVQSLLSLGFDLNLLNG 181 (639)
Q Consensus 162 ~~~~l~~L~~L~l~~N~l~~ 181 (639)
.|..+++|+.|++++|.+.+
T Consensus 148 ~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 148 AFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TTTTCTTCCEEECCSCCEEC
T ss_pred HhcCCCCCCEEEecCcCCcC
Confidence 67777777777777776654
No 356
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=1.4e-18 Score=168.47 Aligned_cols=158 Identities=25% Similarity=0.257 Sum_probs=117.6
Q ss_pred cceeeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCE
Q 046265 3 CLAFFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQ 82 (639)
Q Consensus 3 ~~~~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 82 (639)
|.|. -..|+.+++++. .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|+++...+..|..+++|++
T Consensus 17 ~~Cs-~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~ 92 (229)
T 3e6j_A 17 CSCS-GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTV 92 (229)
T ss_dssp CEEE-TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CEEe-CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCE
Confidence 4443 334666666554 6666554 78888888888888777888888888888888888887544556788888888
Q ss_pred EeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCcc
Q 046265 83 LVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPI 162 (639)
Q Consensus 83 L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 162 (639)
|+|++|++++..+..|..+.+| ++|+|++|+++ .+|..+..+++|++|+|++|++++..+..
T Consensus 93 L~Ls~N~l~~l~~~~~~~l~~L-----------------~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~ 154 (229)
T 3e6j_A 93 LDLGTNQLTVLPSAVFDRLVHL-----------------KELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGA 154 (229)
T ss_dssp EECCSSCCCCCCTTTTTTCTTC-----------------CEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTT
T ss_pred EECCCCcCCccChhHhCcchhh-----------------CeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHH
Confidence 8888888886666666666533 47888888887 67777788888888888888888666667
Q ss_pred ccCCCcccEEEcccCcCCcc
Q 046265 163 LGKVQSLLSLGFDLNLLNGV 182 (639)
Q Consensus 163 ~~~l~~L~~L~l~~N~l~~~ 182 (639)
|..+++|+.|++++|.+.+.
T Consensus 155 ~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 155 FDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp TTTCTTCCEEECTTSCBCTT
T ss_pred HhCCCCCCEEEeeCCCccCC
Confidence 77888888888888877643
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=4.1e-19 Score=184.79 Aligned_cols=168 Identities=22% Similarity=0.222 Sum_probs=134.4
Q ss_pred cceeeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCC-CCCCCCEEEcccCcCCCCCCcccCCCCCCC
Q 046265 3 CLAFFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEID-PLTHLKHLYINVNKLRGSVPREVGQLSSLK 81 (639)
Q Consensus 3 ~~~~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~-~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 81 (639)
|.|.. ..++.+++++. .+|..+. +.+++|+|++|.|++..+..+. .+++|++|+|++|+|++..|..|.++++|+
T Consensus 16 C~C~~-~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~ 91 (361)
T 2xot_A 16 CLCAS-NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLR 91 (361)
T ss_dssp CEEET-TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred CEECC-CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCC
Confidence 77753 46778877776 4777665 4689999999999987777787 999999999999999977777899999999
Q ss_pred EEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCc
Q 046265 82 QLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPP 161 (639)
Q Consensus 82 ~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 161 (639)
+|+|++|++++..+..|.++.+| ++|+|++|++++..|..|..+++|++|+|++|++++..+.
T Consensus 92 ~L~Ls~N~l~~~~~~~~~~l~~L-----------------~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 92 YLDLSSNHLHTLDEFLFSDLQAL-----------------EVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp EEECCSSCCCEECTTTTTTCTTC-----------------CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGG
T ss_pred EEECCCCcCCcCCHHHhCCCcCC-----------------CEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHH
Confidence 99999999998777777777643 5899999999988888999999999999999999864444
Q ss_pred cc---cCCCcccEEEcccCcCCccCCccCcCCC
Q 046265 162 IL---GKVQSLLSLGFDLNLLNGVLPPSISNLS 191 (639)
Q Consensus 162 ~~---~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 191 (639)
.| ..+++|+.|+|++|.|++..+..+..++
T Consensus 155 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~ 187 (361)
T 2xot_A 155 LIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLP 187 (361)
T ss_dssp GTC----CTTCCEEECCSSCCCCCCHHHHHHSC
T ss_pred HhcCcccCCcCCEEECCCCCCCccCHHHhhhcc
Confidence 44 5789999999999999865544454443
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=1.9e-18 Score=166.34 Aligned_cols=151 Identities=19% Similarity=0.241 Sum_probs=131.1
Q ss_pred CCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCC
Q 046265 32 LKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPN 111 (639)
Q Consensus 32 L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~ 111 (639)
-+.+++++++++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|++++..|..|.++++|
T Consensus 13 ~~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L------- 82 (220)
T 2v9t_B 13 NNIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL------- 82 (220)
T ss_dssp TTEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSC-------
T ss_pred CCEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCC-------
Confidence 368999999998 6787665 789999999999997777789999999999999999998888888887743
Q ss_pred CCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCC
Q 046265 112 SLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLS 191 (639)
Q Consensus 112 ~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 191 (639)
++|+|++|+++...+..|..+++|++|+|++|++++..|..|..+++|+.|++++|.+++..+..|..++
T Consensus 83 ----------~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 152 (220)
T 2v9t_B 83 ----------NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 152 (220)
T ss_dssp ----------CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred ----------CEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCC
Confidence 5999999999966666789999999999999999998899999999999999999999988877787777
Q ss_pred CCCeEEccCCc
Q 046265 192 NLEGLYLYSSL 202 (639)
Q Consensus 192 ~L~~L~l~~~~ 202 (639)
+|+.|+++.|.
T Consensus 153 ~L~~L~L~~N~ 163 (220)
T 2v9t_B 153 AIQTMHLAQNP 163 (220)
T ss_dssp TCCEEECCSSC
T ss_pred CCCEEEeCCCC
Confidence 77766665544
No 359
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=2.6e-19 Score=176.89 Aligned_cols=139 Identities=19% Similarity=0.222 Sum_probs=106.7
Q ss_pred CCCcceeccCCCceEEEEEc-CCCcE--EEEEEccCCCCC----------------------hhhHHHHHHHHHHHhccc
Q 046265 467 FDAKYCIGTAGQASVYKAEL-PSWEI--VAVKKFHSPHPD----------------------MVVQQAFSNEIKALTELR 521 (639)
Q Consensus 467 f~~~~~ig~g~~g~vy~~~~-~~~~~--vavK~~~~~~~~----------------------~~~~~~~~~e~~~l~~l~ 521 (639)
|+....||+|+||.||+|.. .+|+. ||||.++..... ......+.+|+..+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45668999999999999977 78888 999987643211 012246789999999999
Q ss_pred cCce--eeeEEEEEcCCceeEEecccCC-C----ChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHH-hCCCCCeEee
Q 046265 522 HRNV--VKFYGFSFHPRQSFLLYEYLGR-G----SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMH-HDYFPPIVHR 593 (639)
Q Consensus 522 H~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~~~~iiHr 593 (639)
|+++ +..+++ +..++||||+++ | .|.+.... .++..+..++.|++.|++||| .. +|+||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givHr 195 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVHA 195 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEECS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 8864 344432 367899999942 4 66665432 122346678999999999999 77 99999
Q ss_pred cCCCCCeeeCCCCceEEccccccccCC
Q 046265 594 DISSKNVLLGLDYDAHVSDFGISKFLK 620 (639)
Q Consensus 594 dlk~~Nill~~~~~~kl~DfGla~~~~ 620 (639)
||||+|||++. .++|+|||+|....
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEETT
T ss_pred CCCHHHEEEcC--cEEEEECcccccCC
Confidence 99999999998 99999999998764
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=2.1e-18 Score=166.07 Aligned_cols=151 Identities=20% Similarity=0.210 Sum_probs=130.2
Q ss_pred CCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCC-cccCCCCCCCEEeeecccCccccCccccCCCCCCcccCC
Q 046265 32 LKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVP-REVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMP 110 (639)
Q Consensus 32 L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp 110 (639)
-+.+++++|.++ .+|..+. ..+++|+|++|++++..| ..|..+++|++|+|++|++++..+..|.++++|
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L------ 83 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGV------ 83 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTC------
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCC------
Confidence 368999999998 5787664 356899999999997645 458999999999999999998888888887743
Q ss_pred CCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCC
Q 046265 111 NSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNL 190 (639)
Q Consensus 111 ~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 190 (639)
++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|++++|.+++..|..|..+
T Consensus 84 -----------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 152 (220)
T 2v70_A 84 -----------NEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTL 152 (220)
T ss_dssp -----------CEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTC
T ss_pred -----------CEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCC
Confidence 599999999998888889999999999999999999889999999999999999999999888888877
Q ss_pred CCCCeEEccCCc
Q 046265 191 SNLEGLYLYSSL 202 (639)
Q Consensus 191 ~~L~~L~l~~~~ 202 (639)
++|+.|+++.|.
T Consensus 153 ~~L~~L~L~~N~ 164 (220)
T 2v70_A 153 HSLSTLNLLANP 164 (220)
T ss_dssp TTCCEEECCSCC
T ss_pred CCCCEEEecCcC
Confidence 777666665443
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=1.9e-18 Score=179.68 Aligned_cols=131 Identities=24% Similarity=0.236 Sum_probs=97.3
Q ss_pred CCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccC-CCCCCCEEeeecccCccccCccccCCCCCCcccCC
Q 046265 32 LKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVG-QLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMP 110 (639)
Q Consensus 32 L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp 110 (639)
-+.+++++++++ .+|..+. +.++.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.++++|
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L------ 90 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNL------ 90 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTC------
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCC------
Confidence 367888888887 4676554 3578888888888866666666 78888888888888887666667666633
Q ss_pred CCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCcc
Q 046265 111 NSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGV 182 (639)
Q Consensus 111 ~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 182 (639)
++|+|++|++++..+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|.+++.
T Consensus 91 -----------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l 151 (361)
T 2xot_A 91 -----------RYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRF 151 (361)
T ss_dssp -----------CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSC
T ss_pred -----------CEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCee
Confidence 4788888888766666777788888888888888776677777777777777777777643
No 362
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=9.8e-18 Score=162.51 Aligned_cols=149 Identities=27% Similarity=0.351 Sum_probs=126.9
Q ss_pred CCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCC
Q 046265 32 LKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPN 111 (639)
Q Consensus 32 L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~ 111 (639)
.+.++.+++.++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+++...+..|..+++|
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L------- 90 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQL------- 90 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-------
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCc-------
Confidence 578999999997 6777665 899999999999998889999999999999999999987666667777633
Q ss_pred CCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCC
Q 046265 112 SLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLS 191 (639)
Q Consensus 112 ~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 191 (639)
++|+|++|++++..+..|..+++|++|+|++|+++ .+|..+..+++|+.|++++|.+++..+..|..++
T Consensus 91 ----------~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 159 (229)
T 3e6j_A 91 ----------TVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLS 159 (229)
T ss_dssp ----------CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred ----------CEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCC
Confidence 59999999999777777899999999999999998 7899999999999999999999977666676666
Q ss_pred CCCeEEccCC
Q 046265 192 NLEGLYLYSS 201 (639)
Q Consensus 192 ~L~~L~l~~~ 201 (639)
+|+.|+++.|
T Consensus 160 ~L~~L~l~~N 169 (229)
T 3e6j_A 160 SLTHAYLFGN 169 (229)
T ss_dssp TCCEEECTTS
T ss_pred CCCEEEeeCC
Confidence 6655555443
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=1.7e-18 Score=191.05 Aligned_cols=174 Identities=24% Similarity=0.397 Sum_probs=117.3
Q ss_pred ccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCC
Q 046265 26 IGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLA 105 (639)
Q Consensus 26 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 105 (639)
+..+++|+.|++++|.+.. +| .+..|++|+.|+|++|++++ +|+ +..+++|+.|+|++|++++ +| .+..++
T Consensus 39 ~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~-~~~-l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~--- 109 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD-IKP-LTNLKNLGWLFLDENKIKD-LS-SLKDLK--- 109 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCC-CGG-GGGCTTCCEEECCSSCCCC-CT-TSTTCT---
T ss_pred hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCC-Chh-hccCCCCCEEECcCCCCCC-Ch-hhccCC---
Confidence 4567788888888888873 34 57888888888888888875 333 7788888888888888774 22 344443
Q ss_pred cccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCc
Q 046265 106 IGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPP 185 (639)
Q Consensus 106 ~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 185 (639)
+| ++|+|++|++++ + +.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++..|
T Consensus 110 ------------~L--~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 110 ------------KL--KSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp ------------TC--CEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred ------------CC--CEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-
Confidence 33 578888888874 3 3477788888888888888754 567778888888888888776544
Q ss_pred cCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCc
Q 046265 186 SISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGN 250 (639)
Q Consensus 186 ~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 250 (639)
+..+++|+ .|+|++|++.+. | .+..+++|+.|+|++|.+.+.
T Consensus 171 -l~~l~~L~--------------------~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 171 -LAGLTKLQ--------------------NLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp -GTTCTTCC--------------------EEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECC
T ss_pred -hccCCCCC--------------------EEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCC
Confidence 44444444 444455555432 2 355566666666666666543
No 364
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.76 E-value=3.1e-18 Score=172.40 Aligned_cols=175 Identities=24% Similarity=0.389 Sum_probs=133.1
Q ss_pred ccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCC
Q 046265 26 IGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLA 105 (639)
Q Consensus 26 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 105 (639)
+..+++|++|++++|.++.. | .+..+++|++|+|++|++++ +++ +..+++|++|++++|++++ +| .+..++
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~--- 112 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKD-LS-SLKDLK--- 112 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCT---
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCC-Ch-hhccCC---
Confidence 45678899999999998744 4 48889999999999999985 444 8899999999999998875 22 255544
Q ss_pred cccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCc
Q 046265 106 IGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPP 185 (639)
Q Consensus 106 ~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 185 (639)
+| ++|++++|++++ + +.+..+++|++|++++|++++. ..+..+++|+.|++++|.+++..|
T Consensus 113 ------------~L--~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~- 173 (291)
T 1h6t_A 113 ------------KL--KSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 173 (291)
T ss_dssp ------------TC--CEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred ------------CC--CEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-
Confidence 33 589999999885 3 4678889999999999998864 568888999999999998876543
Q ss_pred cCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcc
Q 046265 186 SISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNI 251 (639)
Q Consensus 186 ~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 251 (639)
+.. +++|+.|++++|.+.+ +| .+..+++|+.|++++|.++...
T Consensus 174 -l~~--------------------l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 174 -LAG--------------------LTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp -GTT--------------------CTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECCC
T ss_pred -hcC--------------------CCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCCc
Confidence 444 4455566666777654 34 3778888899999988887643
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.75 E-value=6.4e-18 Score=186.48 Aligned_cols=192 Identities=23% Similarity=0.330 Sum_probs=152.7
Q ss_pred CCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCccc
Q 046265 29 ISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGS 108 (639)
Q Consensus 29 l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~ 108 (639)
+..+..++++.+.+....+ +..|++|+.|++++|.+. .+| .+..+++|+.|+|++|++++..| +..+++
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~----- 88 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKN----- 88 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTT-----
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCC-----
Confidence 3345667788887775443 578899999999999997 455 58899999999999999986554 555553
Q ss_pred CCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCc
Q 046265 109 MPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSIS 188 (639)
Q Consensus 109 lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 188 (639)
| ++|+|++|++++ +| .+..+++|+.|+|++|++.+ + +.+..+++|+.|+|++|.+++. ..
T Consensus 89 ----------L--~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~-- 148 (605)
T 1m9s_A 89 ----------L--GWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TV-- 148 (605)
T ss_dssp ----------C--CEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GG--
T ss_pred ----------C--CEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hh--
Confidence 3 589999999984 44 68889999999999999986 3 4588899999999999988754 22
Q ss_pred CCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccC
Q 046265 189 NLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQ 268 (639)
Q Consensus 189 ~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 268 (639)
+..+++|+.|+|++|++.+..| +..+++|+.|+|++|.+++. ..+..+++|+.|+|++
T Consensus 149 ------------------l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~ 206 (605)
T 1m9s_A 149 ------------------LSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFS 206 (605)
T ss_dssp ------------------GGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCS
T ss_pred ------------------hcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccC
Confidence 3455677788888888877666 88999999999999999975 3588899999999999
Q ss_pred Ccccc
Q 046265 269 NNFYG 273 (639)
Q Consensus 269 N~l~~ 273 (639)
|.+.+
T Consensus 207 N~l~~ 211 (605)
T 1m9s_A 207 QECLN 211 (605)
T ss_dssp EEEEC
T ss_pred CcCcC
Confidence 88754
No 366
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=8.3e-18 Score=159.02 Aligned_cols=152 Identities=20% Similarity=0.289 Sum_probs=124.7
Q ss_pred cccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCC
Q 046265 25 QIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNL 104 (639)
Q Consensus 25 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 104 (639)
..+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|++++..|..++.+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3467789999999999998 566 6999999999999999776 44589999999999999999998788888777643
Q ss_pred CcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCC
Q 046265 105 AIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLP 184 (639)
Q Consensus 105 ~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 184 (639)
++|++++|++++..|..+..+++|++|+|++|.+.+.+| .+..+++|+.|++++|.+++. +
T Consensus 115 -----------------~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~ 175 (197)
T 4ezg_A 115 -----------------TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R 175 (197)
T ss_dssp -----------------CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T
T ss_pred -----------------CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H
Confidence 589999999998888999999999999999998444566 689999999999999999853 2
Q ss_pred ccCcCCCCCCeEEccC
Q 046265 185 PSISNLSNLEGLYLYS 200 (639)
Q Consensus 185 ~~~~~l~~L~~L~l~~ 200 (639)
.+..+++|+.|+++.
T Consensus 176 -~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 176 -GIEDFPKLNQLYAFS 190 (197)
T ss_dssp -TGGGCSSCCEEEECB
T ss_pred -HhccCCCCCEEEeeC
Confidence 455555555444443
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.73 E-value=7e-21 Score=208.88 Aligned_cols=103 Identities=25% Similarity=0.369 Sum_probs=58.0
Q ss_pred CCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCccc
Q 046265 144 NLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQL 223 (639)
Q Consensus 144 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l 223 (639)
.|++|+|++|.+++ +|. ++.+++|+.|++++|.++ .+|..++.++ +|+.|++++|++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~--------------------~L~~L~Ls~N~l 498 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALR--------------------CLEVLQASDNAL 498 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCT--------------------TCCEEECCSSCC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCC--------------------CCCEEECCCCCC
Confidence 36666666666664 454 666666666666666665 4454444333 333444445555
Q ss_pred CCCCCccccCCCCCceeccccccccCcc-hhhhhcCCCccEEeccCCcc
Q 046265 224 FGQIPKSLRNFTSLNIVHLEQNHLTGNI-YEVFGIYPNLTFLDLSQNNF 271 (639)
Q Consensus 224 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l 271 (639)
++ +| .++.+++|+.|+|++|.+++.. |..++.+++|+.|+|++|.+
T Consensus 499 ~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l 545 (567)
T 1dce_A 499 EN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 545 (567)
T ss_dssp CC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred CC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcC
Confidence 44 34 4555566666666666665554 55555666666666555544
No 368
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.73 E-value=2.4e-17 Score=165.96 Aligned_cols=162 Identities=26% Similarity=0.419 Sum_probs=131.6
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeee
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLY 86 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 86 (639)
.+..+++++|.+... | .+..+++|++|+|++|.+++..| +..+++|++|++++|++++ +| .+..+++|++|+++
T Consensus 47 ~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 47 SIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLE 120 (291)
T ss_dssp TCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECT
T ss_pred cccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECC
Confidence 356778999988755 4 58999999999999999996544 9999999999999999984 44 59999999999999
Q ss_pred cccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCC
Q 046265 87 CNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKV 166 (639)
Q Consensus 87 ~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 166 (639)
+|++++. +.+..++ +| ++|++++|++++. ..+..+++|++|+|++|++++..| +..+
T Consensus 121 ~n~i~~~--~~l~~l~---------------~L--~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l 177 (291)
T 1h6t_A 121 HNGISDI--NGLVHLP---------------QL--ESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGL 177 (291)
T ss_dssp TSCCCCC--GGGGGCT---------------TC--CEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred CCcCCCC--hhhcCCC---------------CC--CEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCC
Confidence 9999863 3455555 33 6999999999864 678999999999999999987544 8999
Q ss_pred CcccEEEcccCcCCccCCccCcCCCCCCeEEcc
Q 046265 167 QSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLY 199 (639)
Q Consensus 167 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 199 (639)
++|+.|++++|.+++. | .+..+++|+.|+++
T Consensus 178 ~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~ 208 (291)
T 1h6t_A 178 TKLQNLYLSKNHISDL-R-ALAGLKNLDVLELF 208 (291)
T ss_dssp TTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEE
T ss_pred CccCEEECCCCcCCCC-h-hhccCCCCCEEECc
Confidence 9999999999999853 3 35555555544443
No 369
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=3.3e-17 Score=154.17 Aligned_cols=136 Identities=26% Similarity=0.299 Sum_probs=91.0
Q ss_pred cceeeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCC-CCCCCCCCCEEEcccCcCCCCCCcccCCCCCCC
Q 046265 3 CLAFFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQ-EIDPLTHLKHLYINVNKLRGSVPREVGQLSSLK 81 (639)
Q Consensus 3 ~~~~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~-~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 81 (639)
|.|.. ..+++++|++ +.+|..+.. ++++|+|++|.+++..|. .|+.+++|++|+|++|+|++..|..|.++++|+
T Consensus 6 C~C~~-~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 81 (192)
T 1w8a_A 6 CHCEG-TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQ 81 (192)
T ss_dssp SEEET-TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCC
T ss_pred CEECC-CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCC
Confidence 66643 4566777766 356665543 677777777777755543 367777777777777777766677777777777
Q ss_pred EEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCC
Q 046265 82 QLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSI 159 (639)
Q Consensus 82 ~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 159 (639)
+|+|++|++++..|..|.++++| ++|+|++|++++..|..|..+++|++|+|++|.+.+..
T Consensus 82 ~L~Ls~N~l~~~~~~~~~~l~~L-----------------~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 82 ELQLGENKIKEISNKMFLGLHQL-----------------KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp EEECCSCCCCEECSSSSTTCTTC-----------------CEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred EEECCCCcCCccCHHHhcCCCCC-----------------CEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 77777777776666666555532 46777777777666666667777777777777666543
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.71 E-value=2.1e-20 Score=205.06 Aligned_cols=220 Identities=16% Similarity=0.121 Sum_probs=133.1
Q ss_pred cCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEE-c
Q 046265 140 GHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELE-I 218 (639)
Q Consensus 140 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~-l 218 (639)
..+++|+.|+|++|+++ .+|..++.+++|+.|++++|......|..+.. ++. .+..|..++.+++|+.|+ +
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~------~~~-~~~~~~~l~~l~~L~~L~~l 417 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRA------LDP-LLYEKETLQYFSTLKAVDPM 417 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH------HCT-GGGHHHHHHHHHHHHHHCGG
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHh------ccc-ccCCHHHHHHHHhcccCcch
Confidence 45677777777777775 56777777777777777665411111100000 000 011233344444444444 3
Q ss_pred CCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCE
Q 046265 219 DNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHK 298 (639)
Q Consensus 219 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~ 298 (639)
+.|.+ .+|..+.+++|.++...+ ..|+.|++++|.++ .+|. ++.+++|+.
T Consensus 418 ~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~------------~lp~-~~~l~~L~~ 467 (567)
T 1dce_A 418 RAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLT------------VLCH-LEQLLLVTH 467 (567)
T ss_dssp GHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCS------------SCCC-GGGGTTCCE
T ss_pred hhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCC------------CCcC-ccccccCcE
Confidence 33322 234445555555554322 24777776666552 3565 777788888
Q ss_pred EeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCCCCCcccccC-ChhhhccccCCeeecc
Q 046265 299 LDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEF-PVELEKLVQLTELDLV 377 (639)
Q Consensus 299 L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~-p~~~~~l~~L~~l~l~ 377 (639)
|+|++|+++ .+|..++.+++|+.|+|++|++++ +| .++.+++|+.|+|++|+ +.+.. |..+..+++|+.|+++
T Consensus 468 L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~---l~~~~~p~~l~~l~~L~~L~L~ 541 (567)
T 1dce_A 468 LDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNR---LQQSAAIQPLVSCPRLVLLNLQ 541 (567)
T ss_dssp EECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSC---CCSSSTTGGGGGCTTCCEEECT
T ss_pred eecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCC---CCCCCCcHHHhcCCCCCEEEec
Confidence 888888887 677788888888888888888875 56 67788888888888754 33333 7777888888888888
Q ss_pred CCcCceeecCcchhhhhhhhhhhhcccCcEEcc
Q 046265 378 ITFWEERYRPKSVIWKAWRSLISRMHGLSCIDI 410 (639)
Q Consensus 378 ~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldl 410 (639)
+|.+++.. |. ....+..+++|+.||+
T Consensus 542 ~N~l~~~~-~~------~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 542 GNSLCQEE-GI------QERLAEMLPSVSSILT 567 (567)
T ss_dssp TSGGGGSS-SC------TTHHHHHCTTCSEEEC
T ss_pred CCcCCCCc-cH------HHHHHHHCcccCccCC
Confidence 88777643 21 1133445777777764
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=4.3e-17 Score=154.11 Aligned_cols=150 Identities=18% Similarity=0.147 Sum_probs=128.5
Q ss_pred eeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeee
Q 046265 7 FFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLY 86 (639)
Q Consensus 7 ~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 86 (639)
.+..+++++|++. .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|++++..|..++.+++|++|+++
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 3567889999988 666 7999999999999999775 34579999999999999999998789999999999999999
Q ss_pred cccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCc-CcccCCccccCCCCCCEEeccCCCCCCCCCccccC
Q 046265 87 CNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQ-LSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGK 165 (639)
Q Consensus 87 ~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 165 (639)
+|++++..|..++.+++| ++|++++|. ++ .+| .+..+++|++|++++|.+++ ++ .+..
T Consensus 121 ~n~i~~~~~~~l~~l~~L-----------------~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~ 179 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKV-----------------NSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIED 179 (197)
T ss_dssp SSBCBGGGHHHHTTCSSC-----------------CEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGG
T ss_pred CCccCcHhHHHHhhCCCC-----------------CEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-Hhcc
Confidence 999998888888877743 599999998 65 666 68899999999999999986 44 7899
Q ss_pred CCcccEEEcccCcCCc
Q 046265 166 VQSLLSLGFDLNLLNG 181 (639)
Q Consensus 166 l~~L~~L~l~~N~l~~ 181 (639)
+++|+.|++++|++.+
T Consensus 180 l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 180 FPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CSSCCEEEECBC----
T ss_pred CCCCCEEEeeCcccCC
Confidence 9999999999999864
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=8.1e-17 Score=151.45 Aligned_cols=131 Identities=28% Similarity=0.353 Sum_probs=110.8
Q ss_pred CEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCc-ccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCC
Q 046265 33 KFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPR-EVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPN 111 (639)
Q Consensus 33 ~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~ 111 (639)
+++++++|+++ .+|..+.. +|++|++++|++++..+. .|+.+++|++|+|++|++++..|..|.++++|
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L------- 80 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI------- 80 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTC-------
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccC-------
Confidence 78999999996 67877654 899999999999865554 48899999999999999998888888877743
Q ss_pred CCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccC
Q 046265 112 SLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVL 183 (639)
Q Consensus 112 ~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 183 (639)
++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|++++|.+++..
T Consensus 81 ----------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 81 ----------QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp ----------CEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred ----------CEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 58999999999888888889999999999999999888888899999999999999887653
No 373
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=3.4e-18 Score=193.44 Aligned_cols=215 Identities=20% Similarity=0.175 Sum_probs=112.2
Q ss_pred EEEEeCCCcccccCCccccCCCCCCE-----EECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEE
Q 046265 9 FQVVHESNTLFAIIPPQIGNISNLKF-----LDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQL 83 (639)
Q Consensus 9 ~~~~~~~n~~~~~~p~~~~~l~~L~~-----L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 83 (639)
..+.+..|.+.. +|..+.....|.. ++++.|.+. ..|..+..++.|+.|+|++|.+. .+|..+.++++|++|
T Consensus 176 ~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L 252 (727)
T 4b8c_D 176 PKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRL 252 (727)
T ss_dssp ------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCC
T ss_pred ceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEE
Confidence 445566666654 3444333333332 233344444 55778889999999999999988 788888899999999
Q ss_pred eeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccc
Q 046265 84 VLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPIL 163 (639)
Q Consensus 84 ~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 163 (639)
+|++|.|+ .+|..|+++++| ++|+|++|+|+ .+|..|++|++|++|+|++|.++ .+|..|
T Consensus 253 ~Ls~N~l~-~lp~~~~~l~~L-----------------~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~ 312 (727)
T 4b8c_D 253 YLNGNSLT-ELPAEIKNLSNL-----------------RVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEF 312 (727)
T ss_dssp BCTTSCCS-CCCGGGGGGTTC-----------------CEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSST
T ss_pred EeeCCcCc-ccChhhhCCCCC-----------------CEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhh
Confidence 99999988 777777776633 58999999998 77888999999999999999886 678889
Q ss_pred cCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccc
Q 046265 164 GKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLE 243 (639)
Q Consensus 164 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 243 (639)
+.+++|+.|+|++|.+++.+|..+..+.. .+..+++++|.+.+.+|..+ ..|+++
T Consensus 313 ~~l~~L~~L~L~~N~l~~~~p~~~~~~~~-------------------~~~~l~l~~N~l~~~~p~~l------~~l~l~ 367 (727)
T 4b8c_D 313 GNLCNLQFLGVEGNPLEKQFLKILTEKSV-------------------TGLIFYLRDNRPEIPLPHER------RFIEIN 367 (727)
T ss_dssp TSCTTCCCEECTTSCCCSHHHHHHHHHHH-------------------HHHHHHHHHCCCCCCCCCC-------------
T ss_pred hcCCCccEEeCCCCccCCCChHHHhhcch-------------------hhhHHhhccCcccCcCcccc------ceeEee
Confidence 99999999999999998887766543210 11124566777777766543 344555
Q ss_pred cc--------cccCcchhhhhcCCCccEEeccCCcc
Q 046265 244 QN--------HLTGNIYEVFGIYPNLTFLDLSQNNF 271 (639)
Q Consensus 244 ~N--------~l~~~~~~~~~~l~~L~~L~Ls~N~l 271 (639)
.| .+.+..+..+..+..+....++.|.+
T Consensus 368 ~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil 403 (727)
T 4b8c_D 368 TDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTL 403 (727)
T ss_dssp ----------------------------------CC
T ss_pred cccccccccCCccccccchhhcccccceeeeecccc
Confidence 55 23333333333444445555555554
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=9.1e-17 Score=159.08 Aligned_cols=159 Identities=20% Similarity=0.267 Sum_probs=123.5
Q ss_pred EeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCc
Q 046265 12 VHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLS 91 (639)
Q Consensus 12 ~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 91 (639)
+++.+.+.... .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++ +|+ +..+++|++|+|++|+++
T Consensus 25 ~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~ 98 (263)
T 1xeu_A 25 NLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLK 98 (263)
T ss_dssp HHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCS
T ss_pred HhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccC
Confidence 45666665433 5788899999999999998 456 78899999999999999985 554 899999999999999988
Q ss_pred cccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccE
Q 046265 92 GWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLS 171 (639)
Q Consensus 92 ~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 171 (639)
+. |.... . +|++|+|++|++++ ++ .+..+++|++|+|++|++++. | .+..+++|+.
T Consensus 99 ~l-~~~~~--~-----------------~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~ 154 (263)
T 1xeu_A 99 NL-NGIPS--A-----------------CLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEV 154 (263)
T ss_dssp CC-TTCCC--S-----------------SCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCE
T ss_pred Cc-Ccccc--C-----------------cccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCE
Confidence 53 32111 2 23689999999985 34 588999999999999999864 4 6888999999
Q ss_pred EEcccCcCCccCCccCcCCCCCCeEEccCCc
Q 046265 172 LGFDLNLLNGVLPPSISNLSNLEGLYLYSSL 202 (639)
Q Consensus 172 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~ 202 (639)
|++++|.+++. ..+..+++|+.|+++.+.
T Consensus 155 L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 155 LDLHGNEITNT--GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp EECTTSCCCBC--TTSTTCCCCCEEEEEEEE
T ss_pred EECCCCcCcch--HHhccCCCCCEEeCCCCc
Confidence 99999999876 556666666666665443
No 375
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=6e-18 Score=167.62 Aligned_cols=171 Identities=19% Similarity=0.291 Sum_probs=122.1
Q ss_pred CCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcc
Q 046265 28 NISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIG 107 (639)
Q Consensus 28 ~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~ 107 (639)
.+.++..+++++|.++.. + .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..| +.++++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L--- 87 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKL--- 87 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSC---
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCC---
Confidence 455677788888888743 3 5788889999999999887 566 68888888888888888886444 5555532
Q ss_pred cCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccC
Q 046265 108 SMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSI 187 (639)
Q Consensus 108 ~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 187 (639)
++|+|++|++++ +|... . ++|++|+|++|++++ +| .+..+++|+.|++++|.+++. | .+
T Consensus 88 --------------~~L~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l 146 (263)
T 1xeu_A 88 --------------EELSVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-ML 146 (263)
T ss_dssp --------------CEEECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GG
T ss_pred --------------CEEECCCCccCC-cCccc-c-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HH
Confidence 588888888874 44433 2 788888888888875 33 577888888888888887653 2 23
Q ss_pred cCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCc
Q 046265 188 SNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGN 250 (639)
Q Consensus 188 ~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 250 (639)
..+++|+.|++++|++.+. ..+..+++|+.|++++|.+++.
T Consensus 147 --------------------~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 147 --------------------GFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp --------------------GGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred --------------------ccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 3445556666666766554 4566777777777777777754
No 376
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.69 E-value=1e-17 Score=189.56 Aligned_cols=129 Identities=22% Similarity=0.137 Sum_probs=40.8
Q ss_pred CCCCEEECcCCCCccCCCCCCCCCCCCCE-----EEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCC
Q 046265 30 SNLKFLDMGNNQLSGVIPQEIDPLTHLKH-----LYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNL 104 (639)
Q Consensus 30 ~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~-----L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 104 (639)
+.++.|+|.+|.+.. .|..+.....|.. ++++.|.+. ..|..+..+++|+.|+|++|.+. .+|..+.++++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 446667777776663 2333222222211 122222222 23444555555555555555544 333333333311
Q ss_pred CcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCC
Q 046265 105 AIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLN 180 (639)
Q Consensus 105 ~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 180 (639)
++|+|++|.++ .+|..|++|++|++|+|++|+|+ .+|..|+.+++|++|+|++|.|+
T Consensus 250 -----------------~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 306 (727)
T 4b8c_D 250 -----------------TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT 306 (727)
T ss_dssp -----------------SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC
T ss_pred -----------------CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC
Confidence 24455555554 44544555555555555555554 34444555555555555555443
No 377
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=1.7e-16 Score=145.92 Aligned_cols=138 Identities=23% Similarity=0.153 Sum_probs=117.4
Q ss_pred CCCCCCEEECcCCCCc-cCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCc
Q 046265 28 NISNLKFLDMGNNQLS-GVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAI 106 (639)
Q Consensus 28 ~l~~L~~L~Ls~n~l~-~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 106 (639)
..++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|++++.+|..+.++++|
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-- 97 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNL-- 97 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTC--
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCC--
Confidence 4578999999999998 78899999999999999999999854 789999999999999999998777777667643
Q ss_pred ccCCCCCcccCCCCccEEEccCCcCcccC-CccccCCCCCCEEeccCCCCCCCCC---ccccCCCcccEEEcccCcCCcc
Q 046265 107 GSMPNSLSNLTSLSLFHLDLSENQLSGSI-PHFLGHLSNLAVLHLGDNSLFGSIP---PILGKVQSLLSLGFDLNLLNGV 182 (639)
Q Consensus 107 ~~lp~~~~~l~~L~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~~ 182 (639)
++|++++|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+. .
T Consensus 98 ---------------~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~ 161 (168)
T 2ell_A 98 ---------------THLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-E 161 (168)
T ss_dssp ---------------CEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-B
T ss_pred ---------------CEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-h
Confidence 58999999998532 2788999999999999999987655 47899999999999999886 3
Q ss_pred CCc
Q 046265 183 LPP 185 (639)
Q Consensus 183 ~p~ 185 (639)
+|+
T Consensus 162 ~~~ 164 (168)
T 2ell_A 162 APD 164 (168)
T ss_dssp CCS
T ss_pred ccc
Confidence 443
No 378
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.67 E-value=2e-17 Score=169.60 Aligned_cols=141 Identities=9% Similarity=0.039 Sum_probs=99.8
Q ss_pred ccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCC------------hhhH--------HHHHHHHHHHhccccCc
Q 046265 465 NNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPD------------MVVQ--------QAFSNEIKALTELRHRN 524 (639)
Q Consensus 465 ~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~------------~~~~--------~~~~~e~~~l~~l~H~n 524 (639)
.-|+....||+|++|.||+|..++|+.||||.++..... .... ....+|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 347788999999999999999899999999987642100 0001 11234566666665444
Q ss_pred eeeeEEEEEcCCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC
Q 046265 525 VVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSKNVLLGL 604 (639)
Q Consensus 525 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~Nill~~ 604 (639)
+.-..-+.. ...++||||++|+++.++... .....++.|++.++.|||.. +||||||||.|||+++
T Consensus 175 v~vp~p~~~--~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 175 FPVPEPIAQ--SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp CSCCCEEEE--ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCCCeeeec--cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 321111111 234799999999988765432 12345788999999999998 9999999999999987
Q ss_pred CC----------ceEEccccccccC
Q 046265 605 DY----------DAHVSDFGISKFL 619 (639)
Q Consensus 605 ~~----------~~kl~DfGla~~~ 619 (639)
++ .+.|+||+-+...
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCcccccccccceEEEEeCCcccC
Confidence 76 3899999977653
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=8.6e-16 Score=144.42 Aligned_cols=127 Identities=27% Similarity=0.362 Sum_probs=65.9
Q ss_pred CEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCCC
Q 046265 33 KFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNS 112 (639)
Q Consensus 33 ~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~ 112 (639)
+++++++|+++ .+|..+. ++|++|+|++|+++ .+|..|.++++|++|+|++|++++..+..|.++++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L-------- 80 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL-------- 80 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTC--------
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCC--------
Confidence 34555555554 3444332 35555555555554 455555555555555555555554444444444422
Q ss_pred CcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCC
Q 046265 113 LSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLN 180 (639)
Q Consensus 113 ~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 180 (639)
++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|++++|.+.
T Consensus 81 ---------~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 81 ---------LTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp ---------CEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ---------CEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 35555555555444455555555555555555555443344555555555555555543
No 380
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.6e-16 Score=142.86 Aligned_cols=128 Identities=26% Similarity=0.206 Sum_probs=97.9
Q ss_pred CCCCCEEECcCCCCc-cCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcc
Q 046265 29 ISNLKFLDMGNNQLS-GVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIG 107 (639)
Q Consensus 29 l~~L~~L~Ls~n~l~-~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~ 107 (639)
.++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|++++|++++.+|..+..+++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L--- 90 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNL--- 90 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTC---
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCC---
Confidence 467888899988887 67888888888888888888888854 678888888888888888887666666656533
Q ss_pred cCCCCCcccCCCCccEEEccCCcCccc-CCccccCCCCCCEEeccCCCCCCCCC---ccccCCCcccEEEcc
Q 046265 108 SMPNSLSNLTSLSLFHLDLSENQLSGS-IPHFLGHLSNLAVLHLGDNSLFGSIP---PILGKVQSLLSLGFD 175 (639)
Q Consensus 108 ~lp~~~~~l~~L~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~l~ 175 (639)
++|++++|++++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 91 --------------~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 91 --------------THLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp --------------CEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred --------------CEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 4788888888753 34677788888888888888876554 467777777777765
No 381
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.65 E-value=5.9e-17 Score=166.22 Aligned_cols=82 Identities=12% Similarity=-0.010 Sum_probs=42.6
Q ss_pred cccCCCCCCEEeccCCcccccCCccccCCCCCC-eeeccCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhc
Q 046265 289 KIGKLYQLHKLDFSLNHIVGELPIELGNLKSLN-YRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEK 367 (639)
Q Consensus 289 ~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~ 367 (639)
.|.++.+|+.+++++| +....+.+|.+|++|+ .+++.+ .++.+-+.+|.+|++|+.+++++|.+..+. +..|..
T Consensus 245 aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~---~~aF~~ 319 (329)
T 3sb4_A 245 TFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLG---DELFGN 319 (329)
T ss_dssp TTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEEC---TTTTCT
T ss_pred hhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccc---hhhhcC
Confidence 4555555555555555 4444445555555565 555554 444444455555666666665554333332 334555
Q ss_pred cccCCeee
Q 046265 368 LVQLTELD 375 (639)
Q Consensus 368 l~~L~~l~ 375 (639)
+++|+.++
T Consensus 320 ~~~L~~ly 327 (329)
T 3sb4_A 320 GVPSKLIY 327 (329)
T ss_dssp TCCCCEEE
T ss_pred Ccchhhhc
Confidence 55555543
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=9.7e-16 Score=144.06 Aligned_cols=134 Identities=25% Similarity=0.374 Sum_probs=116.7
Q ss_pred ccceeeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCC
Q 046265 2 SCLAFFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLK 81 (639)
Q Consensus 2 ~~~~~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 81 (639)
.|.|.. ..++.++|++. .+|..+. ++|++|+|++|.++ .+|..|..+++|++|+|++|+|++..|..|.++++|+
T Consensus 7 ~C~C~~-~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~ 81 (193)
T 2wfh_A 7 ECTCLD-TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL 81 (193)
T ss_dssp TCEEET-TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCEeCC-CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCC
Confidence 377753 56788888876 6787664 68999999999998 7889999999999999999999987778899999999
Q ss_pred EEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCC
Q 046265 82 QLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFG 157 (639)
Q Consensus 82 ~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 157 (639)
+|+|++|++++..|..|..+++| ++|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 82 ~L~Ls~N~l~~i~~~~f~~l~~L-----------------~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 82 TLILSYNRLRCIPPRTFDGLKSL-----------------RLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp EEECCSSCCCBCCTTTTTTCTTC-----------------CEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred EEECCCCccCEeCHHHhCCCCCC-----------------CEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 99999999998888888887743 599999999997666779999999999999999865
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=1.3e-15 Score=141.24 Aligned_cols=135 Identities=25% Similarity=0.277 Sum_probs=72.3
Q ss_pred cceeeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCE
Q 046265 3 CLAFFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQ 82 (639)
Q Consensus 3 ~~~~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 82 (639)
|.| ....++.+++++. .+|..+. ++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++
T Consensus 5 C~C-~~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 80 (177)
T 2o6r_A 5 CSC-SGTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTI 80 (177)
T ss_dssp CEE-ETTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CEe-CCCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCE
Confidence 555 2345555555554 3443332 46666666666666554455566666666666666666444444556666666
Q ss_pred EeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCC
Q 046265 83 LVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGS 158 (639)
Q Consensus 83 L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 158 (639)
|++++|++++..+..|..+++| ++|++++|++++..+..+..+++|++|+|++|.+.+.
T Consensus 81 L~l~~N~l~~~~~~~~~~l~~L-----------------~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 81 LYLHENKLQSLPNGVFDKLTQL-----------------KELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp EECCSSCCCCCCTTTTTTCTTC-----------------CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred EECCCCCccccCHHHhhCCccc-----------------CEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 6666666654444444444422 3555555555543333345555555555555555543
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=2.8e-15 Score=138.97 Aligned_cols=133 Identities=23% Similarity=0.258 Sum_probs=109.2
Q ss_pred CCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCC
Q 046265 32 LKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPN 111 (639)
Q Consensus 32 L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~ 111 (639)
.+.+++++|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L------- 78 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKL------- 78 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTC-------
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCcc-------
Confidence 578999999997 5665543 689999999999986666678899999999999999987666667766633
Q ss_pred CCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCC
Q 046265 112 SLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLP 184 (639)
Q Consensus 112 ~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 184 (639)
++|++++|++++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|.+.+..|
T Consensus 79 ----------~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 79 ----------TILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp ----------CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ----------CEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 589999999997777778889999999999999987666667889999999999998876543
No 385
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=8.9e-16 Score=140.98 Aligned_cols=137 Identities=23% Similarity=0.207 Sum_probs=117.2
Q ss_pred eeeEEEEeCCCccc-ccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEe
Q 046265 6 FFFFQVVHESNTLF-AIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLV 84 (639)
Q Consensus 6 ~~~~~~~~~~n~~~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 84 (639)
-.+..+++++|++. +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34678899999998 78999999999999999999999865 7899999999999999999977888888899999999
Q ss_pred eecccCccccC-ccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCC---ccccCCCCCCEEeccCCCCCCCCC
Q 046265 85 LYCNGLSGWLP-SSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIP---HFLGHLSNLAVLHLGDNSLFGSIP 160 (639)
Q Consensus 85 L~~N~l~~~~p-~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~p 160 (639)
+++|++++..+ ..+..+++ | ++|++++|.+++..+ ..+..+++|++|++++|.+. .+|
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~---------------L--~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~ 163 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLEC---------------L--KSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAP 163 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSC---------------C--CEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCC
T ss_pred ccCCccCcchhHHHHhcCCC---------------C--CEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcc
Confidence 99999986432 56666653 3 599999999996544 48999999999999999987 455
Q ss_pred cc
Q 046265 161 PI 162 (639)
Q Consensus 161 ~~ 162 (639)
+.
T Consensus 164 ~~ 165 (168)
T 2ell_A 164 DS 165 (168)
T ss_dssp SS
T ss_pred cc
Confidence 43
No 386
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.61 E-value=6.3e-16 Score=158.52 Aligned_cols=214 Identities=13% Similarity=0.042 Sum_probs=123.0
Q ss_pred cEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCc----CCccCCccCcCCCCCC-eE
Q 046265 122 FHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNL----LNGVLPPSISNLSNLE-GL 196 (639)
Q Consensus 122 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~----l~~~~p~~~~~l~~L~-~L 196 (639)
+.|+|.+ +++..-+.+|.++++|+.+++++|.+....+..|....++..+.+..+. ....-+..|.++.+|+ .+
T Consensus 104 ~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i 182 (329)
T 3sb4_A 104 EKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTI 182 (329)
T ss_dssp CC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEE
T ss_pred cEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeE
Confidence 3566665 5554445567777777777777776665555566666666655554421 1222233444455554 33
Q ss_pred EccC-Ccccccc----ccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCcc
Q 046265 197 YLYS-SLVSAEI----GNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNF 271 (639)
Q Consensus 197 ~l~~-~~~~~~~----~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 271 (639)
.+.. +.++..+ ....++..+.+.++-...........+++|+.+++++|.++...+.+|..+++|+.+++.+| +
T Consensus 183 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i 261 (329)
T 3sb4_A 183 QVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-L 261 (329)
T ss_dssp EECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-C
T ss_pred EecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-c
Confidence 3321 1111111 12334445544433111100001113677778888877777777777777777888776654 2
Q ss_pred cccccCcCCccccccCccccCCCCCC-EEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeC
Q 046265 272 YGSLNFSMNNITRSIPPKIGKLYQLH-KLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDL 349 (639)
Q Consensus 272 ~~~l~ls~n~~~~~~p~~~~~l~~L~-~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 349 (639)
...-+..|.++.+|+ .+++.+ .+....+.+|.+|++|+.+++++|++...-+.+|.++++|+.++.
T Consensus 262 -----------~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 262 -----------KTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp -----------CEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred -----------ceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 223345567777787 777776 566555677777888888887777777666667777777777653
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=6.5e-16 Score=138.85 Aligned_cols=129 Identities=23% Similarity=0.265 Sum_probs=109.6
Q ss_pred CCCCCCEEEcccCcCC-CCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCc
Q 046265 52 PLTHLKHLYINVNKLR-GSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQ 130 (639)
Q Consensus 52 ~L~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~ 130 (639)
..++|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..++.++ +| ++|++++|+
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~---------------~L--~~L~Ls~n~ 75 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLN---------------KL--KKLELSDNR 75 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCT---------------TC--CEEECCSSC
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCC---------------CC--CEEECCCCc
Confidence 3478999999999998 78999999999999999999999865 5555555 33 699999999
Q ss_pred CcccCCccccCCCCCCEEeccCCCCCCC-CCccccCCCcccEEEcccCcCCccCC---ccCcCCCCCCeEEcc
Q 046265 131 LSGSIPHFLGHLSNLAVLHLGDNSLFGS-IPPILGKVQSLLSLGFDLNLLNGVLP---PSISNLSNLEGLYLY 199 (639)
Q Consensus 131 l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p---~~~~~l~~L~~L~l~ 199 (639)
+++.+|..+..+++|++|++++|.+++. .|..++.+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 76 i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 76 VSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 9987899888899999999999999863 34789999999999999999987765 467777888877664
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=7e-15 Score=136.09 Aligned_cols=134 Identities=21% Similarity=0.186 Sum_probs=103.1
Q ss_pred ccccCCCCCCEEECcCCCCccCCCCCCCCCC-CCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCC
Q 046265 24 PQIGNISNLKFLDMGNNQLSGVIPQEIDPLT-HLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLN 102 (639)
Q Consensus 24 ~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 102 (639)
+.+.++++|++|++++|.++. +|. +..+. +|++|++++|.+++. ..|..+++|++|++++|++++..|..|..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 456778899999999999984 454 55554 899999999999854 5788889999999999988865545556666
Q ss_pred CCCcccCCCCCcccCCCCccEEEccCCcCcccCCc--cccCCCCCCEEeccCCCCCCCCCcc----ccCCCcccEEEccc
Q 046265 103 NLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPH--FLGHLSNLAVLHLGDNSLFGSIPPI----LGKVQSLLSLGFDL 176 (639)
Q Consensus 103 ~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~l~~ 176 (639)
+| ++|++++|+++ .+|. .+..+++|++|++++|.++ .+|.. +..+++|+.|+++.
T Consensus 89 ~L-----------------~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~ 149 (176)
T 1a9n_A 89 DL-----------------TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQK 149 (176)
T ss_dssp TC-----------------CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEE
T ss_pred CC-----------------CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCc
Confidence 33 58888888886 5665 7788888888888888887 45553 77888888888888
Q ss_pred CcCC
Q 046265 177 NLLN 180 (639)
Q Consensus 177 N~l~ 180 (639)
|.+.
T Consensus 150 n~~~ 153 (176)
T 1a9n_A 150 VKLK 153 (176)
T ss_dssp CCHH
T ss_pred CCHH
Confidence 7654
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=7.2e-17 Score=152.67 Aligned_cols=138 Identities=21% Similarity=0.223 Sum_probs=103.8
Q ss_pred ccCCCCCCEEECcCCCCccCCCC------CCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCcccc
Q 046265 26 IGNISNLKFLDMGNNQLSGVIPQ------EIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFG 99 (639)
Q Consensus 26 ~~~l~~L~~L~Ls~n~l~~~~p~------~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 99 (639)
+.....++.++++.+.++|..|. .+..+++|++|+|++|++++ +| .+..+++|++|++++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45566777788888888877776 78888888888888888875 67 7888888888888888887 4555554
Q ss_pred CCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCC-ccccCCCcccEEEcccCc
Q 046265 100 NLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIP-PILGKVQSLLSLGFDLNL 178 (639)
Q Consensus 100 ~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~ 178 (639)
.++ +| ++|++++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|++|++++|.
T Consensus 91 ~~~---------------~L--~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~ 151 (198)
T 1ds9_A 91 VAD---------------TL--EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp HHH---------------HC--SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCH
T ss_pred cCC---------------cC--CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCc
Confidence 444 22 588888888875 45 57778888888888888875322 367788888888888888
Q ss_pred CCccCCc
Q 046265 179 LNGVLPP 185 (639)
Q Consensus 179 l~~~~p~ 185 (639)
+++..|.
T Consensus 152 l~~~~~~ 158 (198)
T 1ds9_A 152 LYNDYKE 158 (198)
T ss_dssp HHHHHHT
T ss_pred ccccccc
Confidence 8766554
No 390
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=2.7e-13 Score=124.49 Aligned_cols=105 Identities=26% Similarity=0.312 Sum_probs=56.2
Q ss_pred CEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCCC
Q 046265 33 KFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNS 112 (639)
Q Consensus 33 ~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~ 112 (639)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|..+++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L-------- 80 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQL-------- 80 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTC--------
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCC--------
Confidence 45666666655 3454442 555566666666655445555555556555555555554444444444422
Q ss_pred CcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCC
Q 046265 113 LSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFG 157 (639)
Q Consensus 113 ~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 157 (639)
++|+|++|++++..+..|..+++|++|+|++|.+..
T Consensus 81 ---------~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 81 ---------TQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp ---------CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred ---------CEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 355555555554444445555555555555555543
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=1.3e-16 Score=150.95 Aligned_cols=147 Identities=20% Similarity=0.299 Sum_probs=121.6
Q ss_pred EEEeCCCcccccCCc------cccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEE
Q 046265 10 QVVHESNTLFAIIPP------QIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQL 83 (639)
Q Consensus 10 ~~~~~~n~~~~~~p~------~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 83 (639)
.++++.+.+.+.+|. .+..+++|++|+|++|.+++ +| .+..+++|++|++++|.++ .+|..+..+++|++|
T Consensus 22 ~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L 98 (198)
T 1ds9_A 22 ATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEEL 98 (198)
T ss_dssp CTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEE
T ss_pred CcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEE
Confidence 345777788888887 89999999999999999986 67 8999999999999999998 788888888999999
Q ss_pred eeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccCC-ccccCCCCCCEEeccCCCCCCCCCcc
Q 046265 84 VLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIP-HFLGHLSNLAVLHLGDNSLFGSIPPI 162 (639)
Q Consensus 84 ~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~ 162 (639)
++++|++++ +| .+..++ +| ++|++++|++++..+ ..+..+++|++|++++|.+.+.+|..
T Consensus 99 ~L~~N~l~~-l~-~~~~l~---------------~L--~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~ 159 (198)
T 1ds9_A 99 WISYNQIAS-LS-GIEKLV---------------NL--RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKEN 159 (198)
T ss_dssp EEEEEECCC-HH-HHHHHH---------------HS--SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTT
T ss_pred ECcCCcCCc-CC-ccccCC---------------CC--CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccc
Confidence 999999986 34 455554 33 699999999984332 47889999999999999998766653
Q ss_pred ----------ccCCCcccEEEcccCcCC
Q 046265 163 ----------LGKVQSLLSLGFDLNLLN 180 (639)
Q Consensus 163 ----------~~~l~~L~~L~l~~N~l~ 180 (639)
+..+++|+.|| +|.++
T Consensus 160 ~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 160 NATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp TTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred cchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 77888888876 55554
No 392
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=2.9e-13 Score=124.33 Aligned_cols=112 Identities=27% Similarity=0.305 Sum_probs=96.4
Q ss_pred cceeeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCE
Q 046265 3 CLAFFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQ 82 (639)
Q Consensus 3 ~~~~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 82 (639)
|.|. ...+++++|++.. +|..+. ++|++|+|++|.|++..|..|..+++|++|+|++|+|++..|..|..+++|++
T Consensus 7 C~C~-~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~ 82 (170)
T 3g39_A 7 CSCS-GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQ 82 (170)
T ss_dssp CEEE-TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCcC-CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCE
Confidence 7663 4678999998875 787774 89999999999999988999999999999999999999766667899999999
Q ss_pred EeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCcccC
Q 046265 83 LVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGSI 135 (639)
Q Consensus 83 L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~ 135 (639)
|+|++|++++..+..|..+++| ++|+|++|.++...
T Consensus 83 L~L~~N~l~~~~~~~~~~l~~L-----------------~~L~L~~N~~~c~c 118 (170)
T 3g39_A 83 LSLNDNQLKSIPRGAFDNLKSL-----------------THIWLLNNPWDCAC 118 (170)
T ss_dssp EECCSSCCCCCCTTTTTTCTTC-----------------CEEECCSSCBCTTB
T ss_pred EECCCCccCEeCHHHhcCCCCC-----------------CEEEeCCCCCCCCc
Confidence 9999999998777778777743 58999999998543
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.46 E-value=5.7e-14 Score=129.94 Aligned_cols=131 Identities=18% Similarity=0.143 Sum_probs=102.7
Q ss_pred CCCCCCCCCCEEEcccCcCCCCCCcccCCCC-CCCEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEc
Q 046265 48 QEIDPLTHLKHLYINVNKLRGSVPREVGQLS-SLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDL 126 (639)
Q Consensus 48 ~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L 126 (639)
..+.++.+|+.|++++|+++ .+|. +..+. +|++|++++|++++. +.|..++ +| ++|++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~---------------~L--~~L~L 71 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLR---------------RL--KTLLV 71 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCS---------------SC--CEEEC
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCC---------------CC--CEEEC
Confidence 34678899999999999998 5664 55555 999999999999864 4555555 33 69999
Q ss_pred cCCcCcccCCccccCCCCCCEEeccCCCCCCCCCc--cccCCCcccEEEcccCcCCccCCcc----CcCCCCCCeEEccC
Q 046265 127 SENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPP--ILGKVQSLLSLGFDLNLLNGVLPPS----ISNLSNLEGLYLYS 200 (639)
Q Consensus 127 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~----~~~l~~L~~L~l~~ 200 (639)
++|++++..|..+..+++|++|+|++|++. .+|. .+..+++|+.|++++|.++. +|.. +..+++|+.|+++.
T Consensus 72 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~ 149 (176)
T 1a9n_A 72 NNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQK 149 (176)
T ss_dssp CSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEE
T ss_pred CCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCc
Confidence 999999665566689999999999999996 5666 78899999999999999974 4543 66666666666654
Q ss_pred C
Q 046265 201 S 201 (639)
Q Consensus 201 ~ 201 (639)
+
T Consensus 150 n 150 (176)
T 1a9n_A 150 V 150 (176)
T ss_dssp C
T ss_pred C
Confidence 3
No 394
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.46 E-value=3.1e-12 Score=134.10 Aligned_cols=264 Identities=11% Similarity=0.084 Sum_probs=167.0
Q ss_pred CCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcc
Q 046265 28 NISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIG 107 (639)
Q Consensus 28 ~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~ 107 (639)
.+..++.+.+.++ ++.+-+.+|.+. +|+.+++..| ++..-..+|.+ .+|+.+.+.. .++.+-+.+|.++.+|
T Consensus 111 ~~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L--- 182 (401)
T 4fdw_A 111 ILKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNL--- 182 (401)
T ss_dssp ECSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTC---
T ss_pred ecCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccC---
Confidence 3466777777543 555556677764 6888887766 55444556666 4688887764 5555555666665533
Q ss_pred cCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccC
Q 046265 108 SMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSI 187 (639)
Q Consensus 108 ~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 187 (639)
+.+++++|+++......|. ..+|+.+.|.++ +...-+..|.++++|+.+++..| ++.+-..+|
T Consensus 183 --------------~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF 245 (401)
T 4fdw_A 183 --------------KKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAF 245 (401)
T ss_dssp --------------CEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTT
T ss_pred --------------CeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccc
Confidence 4777777777744444554 577888888744 55455567778888888888764 454555566
Q ss_pred cCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceecccccccc-----CcchhhhhcCCCcc
Q 046265 188 SNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLT-----GNIYEVFGIYPNLT 262 (639)
Q Consensus 188 ~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~ 262 (639)
.+ .+|+.+.+.+ .+...-+.+|.++++|+.+++.+|.+. ...+..|..+++|+
T Consensus 246 ~~-~~L~~i~lp~---------------------~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~ 303 (401)
T 4fdw_A 246 RE-SGITTVKLPN---------------------GVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLA 303 (401)
T ss_dssp TT-CCCSEEEEET---------------------TCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCC
T ss_pred cc-CCccEEEeCC---------------------CccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCC
Confidence 65 5666665522 121222345556666666666655543 34456677777777
Q ss_pred EEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCC
Q 046265 263 FLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSIS 342 (639)
Q Consensus 263 ~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 342 (639)
.+++.++ + +..-...|.++.+|+.+++..| +...-+.+|.++ +|+.+++++|.+....+..|.+++
T Consensus 304 ~l~l~~~-i-----------~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~ 369 (401)
T 4fdw_A 304 RFEIPES-I-----------RILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFP 369 (401)
T ss_dssp EECCCTT-C-----------CEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSC
T ss_pred eEEeCCc-e-----------EEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCC
Confidence 7776532 2 2223345667778888888554 555556778888 888888888887766666777774
Q ss_pred -CCCEEeCCCC
Q 046265 343 -DLEYLDLSTN 352 (639)
Q Consensus 343 -~L~~L~Ls~N 352 (639)
.++.|++..+
T Consensus 370 ~~l~~l~vp~~ 380 (401)
T 4fdw_A 370 DDITVIRVPAE 380 (401)
T ss_dssp TTCCEEEECGG
T ss_pred CCccEEEeCHH
Confidence 6788887653
No 395
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.46 E-value=4.2e-12 Score=133.06 Aligned_cols=270 Identities=11% Similarity=0.052 Sum_probs=197.2
Q ss_pred CCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcC
Q 046265 52 PLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQL 131 (639)
Q Consensus 52 ~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l 131 (639)
.+..++.+.+.++ ++..-+.+|.+. +|+.+.+..| ++.+-..+|.+. +| +.+++.+ .+
T Consensus 111 ~~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L-----------------~~i~lp~-~l 168 (401)
T 4fdw_A 111 ILKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TV-----------------QEIVFPS-TL 168 (401)
T ss_dssp ECSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CC-----------------CEEECCT-TC
T ss_pred ecCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-Cc-----------------eEEEeCC-Cc
Confidence 4477888888764 554556678774 7999999766 666666666653 22 4777775 56
Q ss_pred cccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCcccccccccc
Q 046265 132 SGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLL 211 (639)
Q Consensus 132 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~ 211 (639)
+..-+..|.++++|+.+++..|+++...+..|. ..+|+.+.+..+ ++.+-..+|.++++|+.+.+..+
T Consensus 169 ~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~---------- 236 (401)
T 4fdw_A 169 EQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN---------- 236 (401)
T ss_dssp CEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT----------
T ss_pred cEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC----------
Confidence 656678899999999999999999865555666 589999999854 77677778888888887776432
Q ss_pred CCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCcccccccCcCCccccccCcccc
Q 046265 212 QLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIG 291 (639)
Q Consensus 212 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~ 291 (639)
+...-..+|.+ .+|+.+.+ .+.++.....+|..+++|+.+++.+|.+. .+.....-+..|.
T Consensus 237 -----------l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~------~~~~~~I~~~aF~ 297 (401)
T 4fdw_A 237 -----------VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN------DDPEAMIHPYCLE 297 (401)
T ss_dssp -----------CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC------CCTTCEECTTTTT
T ss_pred -----------ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc------CCcccEECHHHhh
Confidence 11222345655 68999999 46677777889999999999998887652 1222233456788
Q ss_pred CCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccc-c
Q 046265 292 KLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLV-Q 370 (639)
Q Consensus 292 ~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~-~ 370 (639)
++++|+.+++.+ .+...-..+|.+|++|+.+.+..| ++..-+.+|.++ +|+.+++++|....+. +..+..+. .
T Consensus 298 ~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~---~~~F~~~~~~ 371 (401)
T 4fdw_A 298 GCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVF---EKVWYGFPDD 371 (401)
T ss_dssp TCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCC---CSSCCCSCTT
T ss_pred CCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccc---cccccCCCCC
Confidence 999999999994 577666788999999999999654 766667889999 9999999997544433 34455553 6
Q ss_pred CCeeeccCCc
Q 046265 371 LTELDLVITF 380 (639)
Q Consensus 371 L~~l~l~~n~ 380 (639)
++.+.+-.+.
T Consensus 372 l~~l~vp~~~ 381 (401)
T 4fdw_A 372 ITVIRVPAES 381 (401)
T ss_dssp CCEEEECGGG
T ss_pred ccEEEeCHHH
Confidence 7778775543
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=4.4e-13 Score=123.50 Aligned_cols=104 Identities=26% Similarity=0.365 Sum_probs=57.2
Q ss_pred CEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCCC
Q 046265 33 KFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNS 112 (639)
Q Consensus 33 ~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~ 112 (639)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-------- 83 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQL-------- 83 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC--------
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchh--------
Confidence 45666666664 4555443 566666666666665555556666666666666666554433334444422
Q ss_pred CcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCC
Q 046265 113 LSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLF 156 (639)
Q Consensus 113 ~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 156 (639)
++|+|++|++++..+..|..+++|++|+|++|.+.
T Consensus 84 ---------~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 84 ---------TQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp ---------CEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ---------hEEECCCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 35555555555433334555556666666666554
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=4.7e-13 Score=123.33 Aligned_cols=111 Identities=31% Similarity=0.358 Sum_probs=94.0
Q ss_pred cceeeeEEEEeCCCcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCE
Q 046265 3 CLAFFFFQVVHESNTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQ 82 (639)
Q Consensus 3 ~~~~~~~~~~~~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 82 (639)
|.|. ...+++++|++ +.+|..+. ++|++|+|++|.|++..|..|..+++|++|+|++|+|++..+..|.++++|++
T Consensus 10 C~C~-~~~l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~ 85 (174)
T 2r9u_A 10 CSCD-QTLVNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQ 85 (174)
T ss_dssp SEEC-SSEEECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CEEC-CcEEEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhE
Confidence 6663 35678888888 47888775 89999999999999988999999999999999999999655556799999999
Q ss_pred EeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCCcCccc
Q 046265 83 LVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQLSGS 134 (639)
Q Consensus 83 L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~ 134 (639)
|+|++|+|++..+..|..+++| ++|+|++|.+...
T Consensus 86 L~L~~N~l~~l~~~~~~~l~~L-----------------~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 86 LDLNDNHLKSIPRGAFDNLKSL-----------------THIYLYNNPWDCE 120 (174)
T ss_dssp EECCSSCCCCCCTTTTTTCTTC-----------------SEEECCSSCBCTT
T ss_pred EECCCCccceeCHHHhccccCC-----------------CEEEeCCCCcccc
Confidence 9999999997666667777643 5899999999843
No 398
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.38 E-value=1.5e-11 Score=129.14 Aligned_cols=309 Identities=11% Similarity=0.014 Sum_probs=173.2
Q ss_pred ccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCC
Q 046265 24 PQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNN 103 (639)
Q Consensus 24 ~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 103 (639)
.+|.++++|+.+.|..+ ++.+-..+|.++++|+.+++..+ ++..-..+|.++++|+.+.+..+ +...-..+|.+...
T Consensus 65 ~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~ 141 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDF 141 (394)
T ss_dssp TTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCC
T ss_pred HHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccc
Confidence 34555555555555432 44344445555555555555433 33222334555555555444322 22233333333321
Q ss_pred CCcccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccC
Q 046265 104 LAIGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVL 183 (639)
Q Consensus 104 L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 183 (639)
...... +.....-..+|.++++|+.+.+.++. .......|.++.+|+.+.+..| ++.+.
T Consensus 142 ------------------~~~~~~-~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~ 200 (394)
T 4fs7_A 142 ------------------KEITIP-EGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIR 200 (394)
T ss_dssp ------------------SEEECC-TTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEEC
T ss_pred ------------------cccccC-ccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeC
Confidence 122221 12222334567777788888876543 3233456777777887777665 44455
Q ss_pred CccCcCCCCCCeEEccCCc--cccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCc
Q 046265 184 PPSISNLSNLEGLYLYSSL--VSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNL 261 (639)
Q Consensus 184 p~~~~~l~~L~~L~l~~~~--~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 261 (639)
..+|.++..|+.+.+..+. +.........|+.+.+.... ...-...+.++..++.+.+..+... .....|..+..+
T Consensus 201 ~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l 278 (394)
T 4fs7_A 201 DYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGL 278 (394)
T ss_dssp TTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTC
T ss_pred chhhccccccceeecCCCceEeehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eecccccccccc
Confidence 5667777777777664322 12222334566676665432 2222345667778888887766433 444567777777
Q ss_pred cEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCC
Q 046265 262 TFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSI 341 (639)
Q Consensus 262 ~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 341 (639)
+.+....+.+ ....+..+.+|+.+.+..+ +...-..+|.++++|+.+++..+ ++..-..+|.++
T Consensus 279 ~~~~~~~~~i--------------~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c 342 (394)
T 4fs7_A 279 KKVIYGSVIV--------------PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGC 342 (394)
T ss_dssp CEEEECSSEE--------------CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTC
T ss_pred ceeccCceee--------------ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCC
Confidence 7776543322 1234566777888777654 44444567788888888888643 554556677888
Q ss_pred CCCCEEeCCCCCCCcccccCChhhhccccCCeeeccC
Q 046265 342 SDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVI 378 (639)
Q Consensus 342 ~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~ 378 (639)
.+|+.+++..+ +..+. ...+..+.+|+.+++..
T Consensus 343 ~~L~~i~lp~~-l~~I~---~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 343 TSLSNINFPLS-LRKIG---ANAFQGCINLKKVELPK 375 (394)
T ss_dssp TTCCEECCCTT-CCEEC---TTTBTTCTTCCEEEEEG
T ss_pred CCCCEEEECcc-ccEeh---HHHhhCCCCCCEEEECC
Confidence 88888888654 23332 35677788888887743
No 399
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.27 E-value=3e-10 Score=119.22 Aligned_cols=315 Identities=12% Similarity=0.030 Sum_probs=216.1
Q ss_pred CccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCc
Q 046265 42 LSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSL 121 (639)
Q Consensus 42 l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L 121 (639)
++.+-..+|.++++|+.+.|..+ ++..-..+|.++++|+.+++..+ ++.+-...|.++.+|+...+|..
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~--------- 127 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM--------- 127 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT---------
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc---------
Confidence 45455678999999999999754 66445668999999999999755 66566677888877764444432
Q ss_pred cEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCC
Q 046265 122 FHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSS 201 (639)
Q Consensus 122 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~ 201 (639)
+...-..+|.+...+......... ..-...|.++++|+.+.+..+. ..+....|.++.+|+.+.+..+
T Consensus 128 ---------l~~i~~~aF~~~~~~~~~~~~~~~--~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~ 195 (394)
T 4fs7_A 128 ---------LKSIGVEAFKGCDFKEITIPEGVT--VIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN 195 (394)
T ss_dssp ---------CCEECTTTTTTCCCSEEECCTTCC--EECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT
T ss_pred ---------eeeecceeeecccccccccCcccc--ccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC
Confidence 222233445555444444333322 2234678999999999998664 4466678999999999988644
Q ss_pred c--c-ccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCcccccccCc
Q 046265 202 L--V-SAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNFYGSLNFS 278 (639)
Q Consensus 202 ~--~-~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls 278 (639)
. + ...+.++..|+.+.+..+.. .+.......++|+.+.+..+ ++......|..+..++.+.+..+..
T Consensus 196 ~~~I~~~~F~~~~~L~~i~~~~~~~--~i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~------- 265 (394)
T 4fs7_A 196 LKIIRDYCFAECILLENMEFPNSLY--YLGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKL------- 265 (394)
T ss_dssp CCEECTTTTTTCTTCCBCCCCTTCC--EECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTC-------
T ss_pred ceEeCchhhccccccceeecCCCce--EeehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcc-------
Confidence 2 1 33567777888877766543 23334445678888887643 3434456788889999998765533
Q ss_pred CCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCCCCCCccc
Q 046265 279 MNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLSTNYNNEFR 358 (639)
Q Consensus 279 ~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~ 358 (639)
......+..+..++.+....+.+. ...|..+.+|+.+.+..+ +...-..+|.++.+|+.++|..+ +..+
T Consensus 266 -----~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I- 334 (394)
T 4fs7_A 266 -----RIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEI- 334 (394)
T ss_dssp -----EECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEE-
T ss_pred -----eeeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEE-
Confidence 233455677788888888766542 356888999999999754 66555678999999999999753 2333
Q ss_pred ccCChhhhccccCCeeeccCCcCceeecCcchhhhhhhhhhhhcccCcEEccCCC
Q 046265 359 KEFPVELEKLVQLTELDLVITFWEERYRPKSVIWKAWRSLISRMHGLSCIDISYN 413 (639)
Q Consensus 359 ~~~p~~~~~l~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~l~~L~~ldls~N 413 (639)
-...+..+.+|+.+++..+ +. .+.. .++..+.+|+.+++..+
T Consensus 335 --~~~aF~~c~~L~~i~lp~~-l~-~I~~---------~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 335 --GKRSFRGCTSLSNINFPLS-LR-KIGA---------NAFQGCINLKKVELPKR 376 (394)
T ss_dssp --CTTTTTTCTTCCEECCCTT-CC-EECT---------TTBTTCTTCCEEEEEGG
T ss_pred --hHHhccCCCCCCEEEECcc-cc-EehH---------HHhhCCCCCCEEEECCC
Confidence 2467889999999998655 32 2212 56888999999998765
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=1.7e-11 Score=126.40 Aligned_cols=66 Identities=26% Similarity=0.272 Sum_probs=28.2
Q ss_pred ccCCCCCCEEECcC-CCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCc
Q 046265 26 IGNISNLKFLDMGN-NQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLS 91 (639)
Q Consensus 26 ~~~l~~L~~L~Ls~-n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 91 (639)
|..+++|++|+|++ |.|++..|..|+.|++|+.|+|++|+|++..|..|.+|++|++|+|++|+|+
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 93 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE 93 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccc
Confidence 44444444444443 4444333334444444444444444444333334444444444444444443
No 401
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.24 E-value=4.1e-11 Score=118.32 Aligned_cols=146 Identities=17% Similarity=0.062 Sum_probs=111.4
Q ss_pred HHhccCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc-cCceeeeEEEEEcCCceeE
Q 046265 462 RATNNFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR-HRNVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 462 ~~~~~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~l 540 (639)
.....|......+.|+.+.||++... ++.+++|....... .....+.+|+++++.+. |..+.++++++...+..|+
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 34456777778888889999999755 57899999864211 11234788999998884 6788899999998889999
Q ss_pred EecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCC----------------------------------
Q 046265 541 LYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDY---------------------------------- 586 (639)
Q Consensus 541 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---------------------------------- 586 (639)
||||++|.++.+..... .....++.+++++++.||...
T Consensus 88 v~e~i~G~~l~~~~~~~--------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 88 LMSEADGVLCSEEYEDE--------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EEECCSSEEHHHHCCTT--------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEEecCCeehhhccCCc--------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 99999999998763211 123467888999999999810
Q ss_pred ----------------------CCCeEeecCCCCCeeeCCCCceEEcccccccc
Q 046265 587 ----------------------FPPIVHRDISSKNVLLGLDYDAHVSDFGISKF 618 (639)
Q Consensus 587 ----------------------~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~ 618 (639)
.+.++|+|++|.||++++...+.|+||+.+..
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13589999999999998765667999987654
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=2.6e-11 Score=124.97 Aligned_cols=103 Identities=27% Similarity=0.286 Sum_probs=60.7
Q ss_pred EEECcCC-CCccCCCCCCCCCCCCCEEEccc-CcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCC
Q 046265 34 FLDMGNN-QLSGVIPQEIDPLTHLKHLYINV-NKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPN 111 (639)
Q Consensus 34 ~L~Ls~n-~l~~~~p~~~~~L~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~ 111 (639)
.++++++ +++ .+|. |..+++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|++..|..|.+|++|
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L------- 82 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRL------- 82 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCC-------
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCC-------
Confidence 4566666 665 3555 66666666666664 66665555566666666666666666666555555555532
Q ss_pred CCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCC
Q 046265 112 SLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLF 156 (639)
Q Consensus 112 ~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 156 (639)
++|+|++|+|++..+..|..++ |+.|+|++|.+.
T Consensus 83 ----------~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 83 ----------SRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp ----------CEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ----------CEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 3566666666644444444443 666666666554
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.13 E-value=1.1e-10 Score=115.04 Aligned_cols=130 Identities=15% Similarity=0.115 Sum_probs=96.7
Q ss_pred ccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCc--eeeeEEEEEcCCceeEEecccCCCChh
Q 046265 474 GTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN--VVKFYGFSFHPRQSFLLYEYLGRGSLA 551 (639)
Q Consensus 474 g~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~ 551 (639)
+.|..+.||++...+|+.++||...... ...+.+|+++++.+.+.+ +.+++++...++..|+||||++|.++.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~-----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCccc-----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 4556699999988888889999976431 234678999998886544 556888888888899999999998884
Q ss_pred HHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCC---------------------------------------------
Q 046265 552 IILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDY--------------------------------------------- 586 (639)
Q Consensus 552 ~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--------------------------------------------- 586 (639)
... .. ...++.++++.+..+|...
T Consensus 104 --~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T 1nd4_A 104 --SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA 172 (264)
T ss_dssp --TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred --cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHH
Confidence 211 11 1246677777777777642
Q ss_pred ----------CCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 587 ----------FPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 587 ----------~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
.+.++|+|++|.||++++++.++|+|||.+...
T Consensus 173 ~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 173 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 113999999999999987766779999987653
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.01 E-value=4.2e-12 Score=131.72 Aligned_cols=165 Identities=19% Similarity=0.176 Sum_probs=108.1
Q ss_pred CCCCCEEECcCCCCccCCCCCCC-----CCCCCCEEEcccCcCCCCCCccc-CCCCCCCEEeeecccCccccCccccCCC
Q 046265 29 ISNLKFLDMGNNQLSGVIPQEID-----PLTHLKHLYINVNKLRGSVPREV-GQLSSLKQLVLYCNGLSGWLPSSFGNLN 102 (639)
Q Consensus 29 l~~L~~L~Ls~n~l~~~~p~~~~-----~L~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 102 (639)
++.|++|+|++|.++......+. ..++|+.|+|++|.++..-...+ ..+++|+.|+|++|+++......++..-
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 35788889988888754333332 23688889998888864322222 3456788899998888755444432110
Q ss_pred CCCcccCCCCCcccCCCCccEEEccCCcCcc----cCCccccCCCCCCEEeccCCCCCCC----CCccccCCCcccEEEc
Q 046265 103 NLAIGSMPNSLSNLTSLSLFHLDLSENQLSG----SIPHFLGHLSNLAVLHLGDNSLFGS----IPPILGKVQSLLSLGF 174 (639)
Q Consensus 103 ~L~~~~lp~~~~~l~~L~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l 174 (639)
. ...+ .|++|+|++|.++. .++..+...++|++|+|++|.++.. ++..+...++|+.|+|
T Consensus 151 --~--------~~~~--~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~L 218 (372)
T 3un9_A 151 --L--------HDQC--QITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNV 218 (372)
T ss_dssp --H--------STTC--CCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEEC
T ss_pred --H--------hcCC--ccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEEC
Confidence 0 0011 23688888888864 2344557788899999998888632 2445666778899999
Q ss_pred ccCcCCcc----CCccCcCCCCCCeEEccCCcccc
Q 046265 175 DLNLLNGV----LPPSISNLSNLEGLYLYSSLVSA 205 (639)
Q Consensus 175 ~~N~l~~~----~p~~~~~l~~L~~L~l~~~~~~~ 205 (639)
++|.++.. ++..+...++|+.|+++.|.+..
T Consensus 219 s~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 219 AYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp CSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 99888743 33445566788999988776643
No 405
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.01 E-value=1.7e-09 Score=111.90 Aligned_cols=142 Identities=16% Similarity=0.214 Sum_probs=104.7
Q ss_pred cceeccCCCceEEEEEcCCCcEEEEEEcc--CCCCChhhHHHHHHHHHHHhccc--cCceeeeEEEEEcC---CceeEEe
Q 046265 470 KYCIGTAGQASVYKAELPSWEIVAVKKFH--SPHPDMVVQQAFSNEIKALTELR--HRNVVKFYGFSFHP---RQSFLLY 542 (639)
Q Consensus 470 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~---~~~~lv~ 542 (639)
.+.++.|.++.||+....+ ..+++|+.. .... ......+.+|+++++.+. +..+++++.++.+. +..|+||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4578999999999998765 578888876 3221 112345788999998886 45688999988776 4589999
Q ss_pred cccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 046265 543 EYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDY------------------------------------ 586 (639)
Q Consensus 543 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~------------------------------------ 586 (639)
||++|..+.+.. ...++...+..++.+++++|+.||...
T Consensus 121 e~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 121 EFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp ECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred EecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 999998775311 123566778888999999999999731
Q ss_pred -------------------CCCeEeecCCCCCeeeCCCCc--eEEcccccccc
Q 046265 587 -------------------FPPIVHRDISSKNVLLGLDYD--AHVSDFGISKF 618 (639)
Q Consensus 587 -------------------~~~iiHrdlk~~Nill~~~~~--~kl~DfGla~~ 618 (639)
.+.++|+|+++.||+++.++. +.|.||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246899999999999997753 68999998764
No 406
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.99 E-value=5.7e-11 Score=123.21 Aligned_cols=136 Identities=17% Similarity=0.140 Sum_probs=62.2
Q ss_pred ccCCcEEEcCCcccCCCCCcccc-----CCCCCceeccccccccCcchhh-hhcCCCccEEeccCCcccccccCcCCccc
Q 046265 210 LLQLIELEIDNKQLFGQIPKSLR-----NFTSLNIVHLEQNHLTGNIYEV-FGIYPNLTFLDLSQNNFYGSLNFSMNNIT 283 (639)
Q Consensus 210 l~~L~~L~l~~n~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~ 283 (639)
++.|+.|++++|.+.......+. ..++|+.|+|++|.++...... ...+++|+.|+|++|.+...- .
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~-------~ 143 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEA-------C 143 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHH-------H
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHH-------H
Confidence 34566777777766443222222 1256666666666665432222 223445666665555542100 0
Q ss_pred cccCccc-cCCCCCCEEeccCCccccc----CCccccCCCCCCeeeccCccCccc----CCcCccCCCCCCEEeCCCC
Q 046265 284 RSIPPKI-GKLYQLHKLDFSLNHIVGE----LPIELGNLKSLNYRALNGNKVYGS----LPRVLGSISDLEYLDLSTN 352 (639)
Q Consensus 284 ~~~p~~~-~~l~~L~~L~Ls~N~~~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N 352 (639)
..+...+ ...++|+.|+|++|.+... ++..+..+++|+.|+|++|.+... ++..+...++|+.|+|++|
T Consensus 144 ~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N 221 (372)
T 3un9_A 144 KDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYN 221 (372)
T ss_dssp HHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSS
T ss_pred HHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCC
Confidence 0011111 1234566666666655421 222334455555555555555421 1233334445555555553
No 407
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.96 E-value=7e-08 Score=101.04 Aligned_cols=110 Identities=11% Similarity=0.117 Sum_probs=61.6
Q ss_pred hhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCc
Q 046265 252 YEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVY 331 (639)
Q Consensus 252 ~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~ 331 (639)
..+|..+..|+.+.+.++.. ..-...|.++..|+.+.+. +.+.......|.++++|+.+.+..+ ++
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~------------~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~ 323 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVV------------SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT 323 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCC------------EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC
T ss_pred cceeeecccccEEecccccc------------eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc
Confidence 44566666666666543321 1122345556667766665 3344344556667777777777543 44
Q ss_pred ccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCC
Q 046265 332 GSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVIT 379 (639)
Q Consensus 332 ~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n 379 (639)
.+-..+|.+|.+|+.+.+..+ ...+. ...|..+.+|+.+++..+
T Consensus 324 ~I~~~aF~~C~~L~~i~ip~s-v~~I~---~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 324 QILDDAFAGCEQLERIAIPSS-VTKIP---ESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp EECTTTTTTCTTCCEEEECTT-CCBCC---GGGGTTCTTCCEEEESSC
T ss_pred EehHhHhhCCCCCCEEEECcc-cCEEh---HhHhhCCCCCCEEEECCc
Confidence 344556777777777777542 22221 345666777777766543
No 408
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.88 E-value=1.2e-07 Score=99.21 Aligned_cols=323 Identities=14% Similarity=0.094 Sum_probs=174.0
Q ss_pred cCCccccCCC-CCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCc---CCCCCCcccCCCCCCCEEeeecccCccccCc
Q 046265 21 IIPPQIGNIS-NLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNK---LRGSVPREVGQLSSLKQLVLYCNGLSGWLPS 96 (639)
Q Consensus 21 ~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 96 (639)
+-..+|.+++ .|+.+.+..+ ++.+-..+|.++++|+.+.+..|. ++..-..+|..+.+|+.+.+..+ ++..-..
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~ 131 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSE 131 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTT
T ss_pred cCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhh
Confidence 3445677664 5888888654 665667778888888888887764 54333456777788887777544 5555566
Q ss_pred cccCCCCCCcccCCCC--------CcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCc
Q 046265 97 SFGNLNNLAIGSMPNS--------LSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQS 168 (639)
Q Consensus 97 ~~~~l~~L~~~~lp~~--------~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 168 (639)
.|....+|+.-.+|.. +.++..| ..+.+.++ ++..-..+|.. .+|+.+.+..+-. ..-...|....+
T Consensus 132 aF~~c~~L~~i~lp~~~~~I~~~~F~~c~~L--~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~-~i~~~af~~c~~ 206 (394)
T 4gt6_A 132 AFHHCEELDTVTIPEGVTSVADGMFSYCYSL--HTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVT-RIGTNAFSECFA 206 (394)
T ss_dssp TTTTCTTCCEEECCTTCCEECTTTTTTCTTC--CEEECCTT-CCEECTTTTTT-CCCSEEEECTTCC-EECTTTTTTCTT
T ss_pred hhhhhcccccccccceeeeecccceeccccc--ccccccce-eeEeccccccc-cceeEEEECCccc-ccccchhhhccc
Confidence 7777777775555542 3444555 57777654 44333445543 6788888865432 234456777888
Q ss_pred ccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCcEEEcCCcccCCCCCccccCCCCCceecccccccc
Q 046265 169 LLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLT 248 (639)
Q Consensus 169 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 248 (639)
+.......+......-..+........... .......+..+.+.. .+...-..+|.++++|+.+.+.++..
T Consensus 207 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~- 277 (394)
T 4gt6_A 207 LSTITSDSESYPAIDNVLYEKSANGDYALI-------RYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVV- 277 (394)
T ss_dssp CCEEEECCSSSCBSSSCEEEECTTSCEEEE-------ECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCC-
T ss_pred cceecccccccccccceeeccccccccccc-------ccccccccceEEcCC-cceEcccceeeecccccEEecccccc-
Confidence 888776665443211111111110000000 011112222222221 11112234566666676666654432
Q ss_pred CcchhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCc
Q 046265 249 GNIYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGN 328 (639)
Q Consensus 249 ~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N 328 (639)
.....+|..++.|+.+.+..+ ++..-...|.++.+|+.+++..+ ++..-..+|.+|++|+.+.+..+
T Consensus 278 ~I~~~aF~~c~~L~~i~l~~~------------i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s 344 (394)
T 4gt6_A 278 SIGTGAFMNCPALQDIEFSSR------------ITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS 344 (394)
T ss_dssp EECTTTTTTCTTCCEEECCTT------------CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT
T ss_pred eecCcccccccccccccCCCc------------ccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc
Confidence 234456666777777765321 12222345666677777777654 44344566777777777777543
Q ss_pred cCcccCCcCccCCCCCCEEeCCCCCCCcccccCChhhhccccCCeeeccCC
Q 046265 329 KVYGSLPRVLGSISDLEYLDLSTNYNNEFRKEFPVELEKLVQLTELDLVIT 379 (639)
Q Consensus 329 ~l~~~~p~~~~~l~~L~~L~Ls~N~~~~~~~~~p~~~~~l~~L~~l~l~~n 379 (639)
++..-..+|.+|++|+.+++.++. .. -..+..+..|+.+.+..+
T Consensus 345 -v~~I~~~aF~~C~~L~~i~~~~~~---~~---~~~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 345 -VTKIPESAFSNCTALNNIEYSGSR---SQ---WNAISTDSGLQNLPVAPG 388 (394)
T ss_dssp -CCBCCGGGGTTCTTCCEEEESSCH---HH---HHTCBCCCCC--------
T ss_pred -cCEEhHhHhhCCCCCCEEEECCce---ee---hhhhhccCCCCEEEeCCC
Confidence 543445567777777777777642 11 123445566666665544
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.61 E-value=4.7e-06 Score=86.48 Aligned_cols=286 Identities=9% Similarity=0.007 Sum_probs=154.3
Q ss_pred ccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCC
Q 046265 26 IGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLA 105 (639)
Q Consensus 26 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 105 (639)
+....+|+.+.+.. .++.+-..+|.++.+|+.++|..+ ++..-..+|.+. +|+.+.+..+ ++.+-..+|.+ .+|+
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~ 116 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLD 116 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCS
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcc
Confidence 44566788888864 466555677888888888888654 553444566665 5777766543 44333344433 2343
Q ss_pred cccCCCCCcccCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCc----
Q 046265 106 IGSMPNSLSNLTSLSLFHLDLSENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNG---- 181 (639)
Q Consensus 106 ~~~lp~~~~~l~~L~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~---- 181 (639)
.-.+|.++ +..-...|.+. +|+...+..+ ++..-...|.....++...+..+....
T Consensus 117 ~i~lp~~~------------------~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~ 176 (379)
T 4h09_A 117 DFEFPGAT------------------TEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAEN 176 (379)
T ss_dssp EEECCTTC------------------CEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEET
T ss_pred cccCCCcc------------------ccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeeccc
Confidence 22233221 11111122221 2333322211 111122233333334333333221110
Q ss_pred --------cCCccCcCCCCCCeEEccCCc---cccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCc
Q 046265 182 --------VLPPSISNLSNLEGLYLYSSL---VSAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGN 250 (639)
Q Consensus 182 --------~~p~~~~~l~~L~~L~l~~~~---~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 250 (639)
.....+.....+..+.+.... ....+.....|..+.+..+ +......++.++..|+.+.+..+ ++..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I 254 (379)
T 4h09_A 177 YVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSI 254 (379)
T ss_dssp TEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEE
T ss_pred ceecccccceeccccccccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEe
Confidence 111122233334444332111 1223444556666666543 22233446677788888887655 5555
Q ss_pred chhhhhcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccC
Q 046265 251 IYEVFGIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKV 330 (639)
Q Consensus 251 ~~~~~~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l 330 (639)
...+|..+.+|+.+.+..+ +...-...|..+.+|+.+++.++.+...-...|.+|++|+.+.+..+ +
T Consensus 255 ~~~aF~~~~~l~~i~l~~~------------i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l 321 (379)
T 4h09_A 255 GSFLLQNCTALKTLNFYAK------------VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-L 321 (379)
T ss_dssp CTTTTTTCTTCCEEEECCC------------CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-C
T ss_pred Cccccceeehhcccccccc------------ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-c
Confidence 5667777888888876432 12222345677888888888887777666678888888888888644 5
Q ss_pred cccCCcCccCCCCCCEEeCCC
Q 046265 331 YGSLPRVLGSISDLEYLDLST 351 (639)
Q Consensus 331 ~~~~p~~~~~l~~L~~L~Ls~ 351 (639)
+.+-..+|.++++|+.+.+..
T Consensus 322 ~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 322 KTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CEECTTTTTTCTTCCCCCCCT
T ss_pred cEEHHHHhhCCCCCCEEEECC
Confidence 545556788888888888865
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.58 E-value=1.9e-08 Score=103.28 Aligned_cols=58 Identities=16% Similarity=0.248 Sum_probs=28.9
Q ss_pred CCCEEECcCCCCcc-C-------CCCCCCCCCCCCEEEcccCcCC---------CCCCcccCCCCCCCEEeeecc
Q 046265 31 NLKFLDMGNNQLSG-V-------IPQEIDPLTHLKHLYINVNKLR---------GSVPREVGQLSSLKQLVLYCN 88 (639)
Q Consensus 31 ~L~~L~Ls~n~l~~-~-------~p~~~~~L~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~L~~N 88 (639)
.++.|.+....+.| . +..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|
T Consensus 108 ~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~ 182 (362)
T 2ra8_A 108 SLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGT 182 (362)
T ss_dssp GCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECC
T ss_pred hcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCC
Confidence 45666666554432 1 1223445666777766544221 113333445566666666655
No 411
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.53 E-value=7.2e-07 Score=90.39 Aligned_cols=137 Identities=16% Similarity=0.133 Sum_probs=95.8
Q ss_pred cCCCcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcccc----CceeeeEEEEEcCCceeEE
Q 046265 466 NFDAKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRH----RNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 466 ~f~~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H----~niv~l~~~~~~~~~~~lv 541 (639)
.....+.++.|....||+. ++.+++|.... ......+.+|++++..+.+ ..+.+++++ +..|+|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 4455678899999999998 56788887642 2224558899998888865 234455554 567999
Q ss_pred ecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 046265 542 YEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDY----------------------------------- 586 (639)
Q Consensus 542 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~----------------------------------- 586 (639)
|||++|.++..... ..++...+..++.++++.++.||...
T Consensus 106 me~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 106 MKYIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp EECCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred EeecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 99999988863321 12333445556666666666666421
Q ss_pred -------------------------CCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 587 -------------------------FPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 587 -------------------------~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
.+.++|+|++|.||+++.+..+.|.||+.+...
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 124599999999999998666799999987653
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.50 E-value=7.3e-08 Score=98.98 Aligned_cols=111 Identities=19% Similarity=0.111 Sum_probs=62.4
Q ss_pred CCCCEEeccCCCCCC-CC-------CccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCccccccccccCCc
Q 046265 143 SNLAVLHLGDNSLFG-SI-------PPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLVSAEIGNLLQLI 214 (639)
Q Consensus 143 ~~L~~L~L~~N~l~~-~~-------p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~ 214 (639)
.+++.|.+....+.| .. ......+++|+.|.+..+..... .++.+ ....+...+..+++|+
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~---~is~~--------~~~~L~~ll~~~P~L~ 175 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQ---EISWI--------EQVDLSPVLDAMPLLN 175 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTC---CGGGC--------BCCBCHHHHHTCTTCC
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhc---ccccc--------cccCHHHHHhcCCCCc
Confidence 456778877665442 11 22244567777777755432100 00000 0112333455667888
Q ss_pred EEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhh--cCCCccEEecc
Q 046265 215 ELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFG--IYPNLTFLDLS 267 (639)
Q Consensus 215 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls 267 (639)
.|++++|.-. .+|. + .+++|+.|++..+.+.......+. .+|+|+.|+|+
T Consensus 176 ~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 176 NLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp EEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred EEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 8888776311 2333 3 378888999888887654444444 67888888875
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.49 E-value=1.1e-05 Score=83.60 Aligned_cols=288 Identities=10% Similarity=0.025 Sum_probs=185.2
Q ss_pred CCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccEEEcc
Q 046265 48 QEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLS 127 (639)
Q Consensus 48 ~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~ 127 (639)
+++....+|+.+.+.. .++..-..+|.++.+|+.++|..+ ++.+-..+|.+. +|. .+.+.
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~-----------------~i~~~ 99 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQ-----------------SYTGM 99 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCC-----------------EEEEC
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCc-----------------eEECC
Confidence 3456677899998875 355444568999999999999654 665556666654 232 33443
Q ss_pred CCcCcccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCCccCCccCcCCCCCCeEEccCCcc----
Q 046265 128 ENQLSGSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLNGVLPPSISNLSNLEGLYLYSSLV---- 203 (639)
Q Consensus 128 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~~~~---- 203 (639)
.+ ++..-..+|.. .+|+.+.+..+ +...-...|.+. +|+...+..+ ++..-...|....+++...+.....
T Consensus 100 ~~-l~~I~~~aF~~-~~L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~ 174 (379)
T 4h09_A 100 ER-VKKFGDYVFQG-TDLDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVA 174 (379)
T ss_dssp TT-CCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEE
T ss_pred ce-eeEeccceecc-CCcccccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeec
Confidence 22 33233344544 47999998765 332223345443 5666665443 4445566778888888877653211
Q ss_pred ------------ccccccccCCcEEEcCCcccCCCCCccccCCCCCceeccccccccCcchhhhhcCCCccEEeccCCcc
Q 046265 204 ------------SAEIGNLLQLIELEIDNKQLFGQIPKSLRNFTSLNIVHLEQNHLTGNIYEVFGIYPNLTFLDLSQNNF 271 (639)
Q Consensus 204 ------------~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 271 (639)
...+.....+..+.+.... .......+....+|+.+.+..+ +.......|..+..|+.+.+..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-- 250 (379)
T 4h09_A 175 ENYVLYNKNKTILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-- 250 (379)
T ss_dssp ETTEEEETTSSEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT--
T ss_pred ccceecccccceeccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC--
Confidence 1122333445555444322 1223345667788888887654 44455667888899999887543
Q ss_pred cccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCccCcccCCcCccCCCCCCEEeCCC
Q 046265 272 YGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLKSLNYRALNGNKVYGSLPRVLGSISDLEYLDLST 351 (639)
Q Consensus 272 ~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~ 351 (639)
++..-...+..+.+|+.+.+..+ +.......|..+++|+.+.+.++.+...-+.+|.++.+|+.++|..
T Consensus 251 ----------v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 251 ----------VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp ----------CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred ----------ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCc
Confidence 12223456677888999998654 5545566789999999999998888866678899999999999975
Q ss_pred CCCCcccccCChhhhccccCCeeeccCC
Q 046265 352 NYNNEFRKEFPVELEKLVQLTELDLVIT 379 (639)
Q Consensus 352 N~~~~~~~~~p~~~~~l~~L~~l~l~~n 379 (639)
+ +..+. ...+..+.+|+.+.+..+
T Consensus 320 ~-l~~I~---~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 320 A-LKTIQ---VYAFKNCKALSTISYPKS 343 (379)
T ss_dssp T-CCEEC---TTTTTTCTTCCCCCCCTT
T ss_pred c-ccEEH---HHHhhCCCCCCEEEECCc
Confidence 3 23332 457888999998887543
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.41 E-value=5.3e-07 Score=90.66 Aligned_cols=137 Identities=18% Similarity=0.221 Sum_probs=94.2
Q ss_pred cceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc-cCc--eeeeEEEEEcCC---ceeEEec
Q 046265 470 KYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR-HRN--VVKFYGFSFHPR---QSFLLYE 543 (639)
Q Consensus 470 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lv~e 543 (639)
.+.++.|....||++. ..+++|.-.. ......+.+|+++++.+. +.. +.+.+.+....+ ..|+|||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 3468899999999864 4588888542 233567889999998873 332 445555544333 3589999
Q ss_pred ccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhC--------------------------------------
Q 046265 544 YLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHD-------------------------------------- 585 (639)
Q Consensus 544 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-------------------------------------- 585 (639)
|++|..+..... ..++..++..++.++++.++.+|..
T Consensus 97 ~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 97 KIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred ccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 999988864322 1234455566667777777777641
Q ss_pred -----------------CCCCeEeecCCCCCeeeCC--CCceEEccccccccC
Q 046265 586 -----------------YFPPIVHRDISSKNVLLGL--DYDAHVSDFGISKFL 619 (639)
Q Consensus 586 -----------------~~~~iiHrdlk~~Nill~~--~~~~kl~DfGla~~~ 619 (639)
..+.++|+|++|.||++++ ...+.|+||+.+...
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 1136899999999999988 456889999987653
No 415
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.37 E-value=1.4e-06 Score=86.66 Aligned_cols=140 Identities=19% Similarity=0.191 Sum_probs=92.0
Q ss_pred cceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccC---ceeeeEEEEEcCCceeEEecccC
Q 046265 470 KYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR---NVVKFYGFSFHPRQSFLLYEYLG 546 (639)
Q Consensus 470 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~~~~~~~lv~e~~~ 546 (639)
.+.++.|.++.||+++..+|+.++||...... ......|.+|++.++.+.+. .+++++++. ..|+||||++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 46789999999999998899999999965432 11235688999999999765 577887763 4699999999
Q ss_pred CCChhH--------H---hhcCC----CCC--------------CcCHHHHHH---H-----------------HHHHHH
Q 046265 547 RGSLAI--------I---LSNDA----AID--------------EFSWTVRMN---V-----------------IKSVAN 577 (639)
Q Consensus 547 ~g~L~~--------~---l~~~~----~~~--------------~~~~~~~~~---i-----------------~~~i~~ 577 (639)
++.+.. . +|... +.+ .-+|..... + ...+.+
T Consensus 94 g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~ 173 (288)
T 3d1u_A 94 ERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEK 173 (288)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 987521 1 12111 000 124543211 0 111112
Q ss_pred HHHHHH----hCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 578 TLSYMH----HDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 578 ~l~~lH----~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
.++.+. ....+.++|+|+.+.||+++. +.+.|.|| .+.
T Consensus 174 l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 174 VLDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 222232 223468999999999999987 45889999 554
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.30 E-value=2.4e-08 Score=97.41 Aligned_cols=49 Identities=33% Similarity=0.409 Sum_probs=23.4
Q ss_pred EEEccCCcCcccCCccccCCC--CCCEEeccCCCCCCCCCc-------cccCCCcccEEE
Q 046265 123 HLDLSENQLSGSIPHFLGHLS--NLAVLHLGDNSLFGSIPP-------ILGKVQSLLSLG 173 (639)
Q Consensus 123 ~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~-------~~~~l~~L~~L~ 173 (639)
.|+|++|++++. ..+..+. +|++|+|++|.+.+.+|. .+..+++|+.||
T Consensus 200 ~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 200 ILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp EEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 555555555432 1222222 555555555555554442 244555555543
No 417
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.21 E-value=1.1e-05 Score=80.92 Aligned_cols=74 Identities=12% Similarity=0.021 Sum_probs=54.6
Q ss_pred ceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccC---ceeeeEEEEE-cCCceeEEecccC
Q 046265 471 YCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR---NVVKFYGFSF-HPRQSFLLYEYLG 546 (639)
Q Consensus 471 ~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~-~~~~~~lv~e~~~ 546 (639)
..++.|....||+. ++.++||.-. .......+.+|++++..+.+. .+.+.+.++. ..+..|+||||++
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eecCCCcceeEEEE----CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 45778888899988 4668888743 123456788999999998642 3567777775 4566899999999
Q ss_pred CCChhH
Q 046265 547 RGSLAI 552 (639)
Q Consensus 547 ~g~L~~ 552 (639)
|..+..
T Consensus 97 G~~l~~ 102 (306)
T 3tdw_A 97 GQILGE 102 (306)
T ss_dssp SEECHH
T ss_pred CeECch
Confidence 988765
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.20 E-value=4.6e-07 Score=88.25 Aligned_cols=69 Identities=29% Similarity=0.379 Sum_probs=39.3
Q ss_pred hcCCCccEEeccCCcccccccCcCCccccccCccccCCCCCCEEeccCCcccccCCccccCCC--CCCeeeccCccCccc
Q 046265 256 GIYPNLTFLDLSQNNFYGSLNFSMNNITRSIPPKIGKLYQLHKLDFSLNHIVGELPIELGNLK--SLNYRALNGNKVYGS 333 (639)
Q Consensus 256 ~~l~~L~~L~Ls~N~l~~~l~ls~n~~~~~~p~~~~~l~~L~~L~Ls~N~~~~~~p~~~~~l~--~L~~L~l~~N~l~~~ 333 (639)
..+++|+.|+|++|++++. ..+|..+..+++|+.|+|++|+|.+. ..+..++ +|+.|+|++|.+.+.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l---------~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~ 235 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRL---------DDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDT 235 (267)
T ss_dssp HHCTTCCEEECTTSCCCCC---------GGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGG
T ss_pred hhCCCCCEEECCCCCCCCC---------ccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccc
Confidence 4566777777666665321 12445555666777777777776643 2233333 566666666666554
Q ss_pred CC
Q 046265 334 LP 335 (639)
Q Consensus 334 ~p 335 (639)
+|
T Consensus 236 ~~ 237 (267)
T 3rw6_A 236 FR 237 (267)
T ss_dssp CS
T ss_pred cC
Confidence 44
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.18 E-value=1.8e-07 Score=86.64 Aligned_cols=67 Identities=16% Similarity=0.133 Sum_probs=35.0
Q ss_pred cccCCCCCCEEECcCC-CCccC----CCCCCCCCCCCCEEEcccCcCCCC----CCcccCCCCCCCEEeeecccCc
Q 046265 25 QIGNISNLKFLDMGNN-QLSGV----IPQEIDPLTHLKHLYINVNKLRGS----VPREVGQLSSLKQLVLYCNGLS 91 (639)
Q Consensus 25 ~~~~l~~L~~L~Ls~n-~l~~~----~p~~~~~L~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 91 (639)
.+...+.|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 3455666777777776 65421 223344455666666666665421 2223333445555555555554
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.16 E-value=1.5e-05 Score=78.43 Aligned_cols=134 Identities=16% Similarity=0.130 Sum_probs=89.3
Q ss_pred eccCCCc-eEEEEEcC-CCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc-cCceeeeEEEEEcCCceeEEecccCCCC
Q 046265 473 IGTAGQA-SVYKAELP-SWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR-HRNVVKFYGFSFHPRQSFLLYEYLGRGS 549 (639)
Q Consensus 473 ig~g~~g-~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~g~ 549 (639)
+..|..| .||+.... ++..++||.-.. .....+.+|+..++.+. +--+.++++++.+++..|+|||+++|.+
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 4445544 69988665 456788998653 23456788999888774 3347788999999999999999999987
Q ss_pred hhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHh---------------------------------------------
Q 046265 550 LAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHH--------------------------------------------- 584 (639)
Q Consensus 550 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~--------------------------------------------- 584 (639)
+.+...... .....++.++++.+..||.
T Consensus 107 ~~~~~~~~~-------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 107 AFQVLEEYP-------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHHCG-------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccccCCH-------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 765432110 0111233333333333332
Q ss_pred ------C----CCCCeEeecCCCCCeeeCCCCceEEcccccccc
Q 046265 585 ------D----YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKF 618 (639)
Q Consensus 585 ------~----~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~ 618 (639)
. ..+.++|+|+.+.||++++.+.+-|.||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 1 112479999999999999877778999988764
No 421
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.12 E-value=8.9e-06 Score=83.70 Aligned_cols=142 Identities=10% Similarity=0.120 Sum_probs=88.8
Q ss_pred cceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccC--ceeeeEEEEEcC-CceeEEecccC
Q 046265 470 KYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHR--NVVKFYGFSFHP-RQSFLLYEYLG 546 (639)
Q Consensus 470 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~--niv~l~~~~~~~-~~~~lv~e~~~ 546 (639)
.+.++.|....+|+... +++.+++|..... ..+.+|+.++..+... .+.++++++... +..|+||||++
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 45678899999999875 4688899987531 2477888888887643 356777777765 67899999999
Q ss_pred CCChhHH------------------hhcCCCC----------C----CcCHHHHH---------------------HHHH
Q 046265 547 RGSLAII------------------LSNDAAI----------D----EFSWTVRM---------------------NVIK 573 (639)
Q Consensus 547 ~g~L~~~------------------l~~~~~~----------~----~~~~~~~~---------------------~i~~ 573 (639)
|..+.+. ++..... . .-.|.... ....
T Consensus 118 G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 197 (362)
T 3ovc_A 118 GVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQ 197 (362)
T ss_dssp SEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchH
Confidence 8655321 0110000 0 01122111 1111
Q ss_pred HHHHHHHHHHhC-CCCCeEeecCCCCCeeeCCCCceEEccccccccC
Q 046265 574 SVANTLSYMHHD-YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKFL 619 (639)
Q Consensus 574 ~i~~~l~~lH~~-~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~~ 619 (639)
.+....+++... ..+.++|+|+.+.||+++..+.+.|.||+.+...
T Consensus 198 ~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 198 ALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 122222333221 1146899999999999987777889999987653
No 422
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.08 E-value=3.6e-07 Score=84.55 Aligned_cols=119 Identities=17% Similarity=0.202 Sum_probs=69.7
Q ss_pred CCCCCCCCCEEEcccC-cCCC----CCCcccCCCCCCCEEeeecccCccccCccccCCCCCCcccCCCCCcccCCCCccE
Q 046265 49 EIDPLTHLKHLYINVN-KLRG----SVPREVGQLSSLKQLVLYCNGLSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFH 123 (639)
Q Consensus 49 ~~~~L~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~ 123 (639)
.+...+.|++|+|++| .+.. .+...+...++|++|+|++|++...-...++. .+...++ |++
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~-----------~L~~n~~--L~~ 97 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAE-----------MLKVNNT--LKS 97 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHH-----------HHHHCSS--CCE
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHH-----------HHHhCCC--cCE
Confidence 3556778888888888 7753 23445666778888888888776422111111 0011112 257
Q ss_pred EEccCCcCccc----CCccccCCCCCCEEec--cCCCCCCC----CCccccCCCcccEEEcccCcCC
Q 046265 124 LDLSENQLSGS----IPHFLGHLSNLAVLHL--GDNSLFGS----IPPILGKVQSLLSLGFDLNLLN 180 (639)
Q Consensus 124 L~L~~N~l~~~----~p~~~~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 180 (639)
|+|++|.++.. +...+...++|++|+| ++|.+... +...+...++|++|++++|.+.
T Consensus 98 L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 98 LNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp EECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred EECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 77887777632 3445566667777777 66776532 2223344466777777776653
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.01 E-value=1.2e-05 Score=82.71 Aligned_cols=81 Identities=6% Similarity=0.014 Sum_probs=54.2
Q ss_pred cee-ccCCCceEEEEEcC-------CCcEEEEEEccCCCC-ChhhHHHHHHHHHHHhccc-c--CceeeeEEEEEcC---
Q 046265 471 YCI-GTAGQASVYKAELP-------SWEIVAVKKFHSPHP-DMVVQQAFSNEIKALTELR-H--RNVVKFYGFSFHP--- 535 (639)
Q Consensus 471 ~~i-g~g~~g~vy~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-H--~niv~l~~~~~~~--- 535 (639)
+.+ +.|....+|+.... +++.+++|.-..... .......+.+|+.+++.+. + ..+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78888999998654 256788887653210 0001134678888888774 3 3567888887665
Q ss_pred CceeEEecccCCCChh
Q 046265 536 RQSFLLYEYLGRGSLA 551 (639)
Q Consensus 536 ~~~~lv~e~~~~g~L~ 551 (639)
+..|+||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3578999999886654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.89 E-value=5.3e-05 Score=79.06 Aligned_cols=77 Identities=13% Similarity=-0.012 Sum_probs=49.0
Q ss_pred cceeccCCCceEEEEEcC-CCcEEEEEEccCCCC----C-hhhHHHHHHHHHHHhcccc--C-ceeeeEEEEEcCCceeE
Q 046265 470 KYCIGTAGQASVYKAELP-SWEIVAVKKFHSPHP----D-MVVQQAFSNEIKALTELRH--R-NVVKFYGFSFHPRQSFL 540 (639)
Q Consensus 470 ~~~ig~g~~g~vy~~~~~-~~~~vavK~~~~~~~----~-~~~~~~~~~e~~~l~~l~H--~-niv~l~~~~~~~~~~~l 540 (639)
.+.+|.|..+.||++... +++.|+||....... . ....+.+..|+++++.+.. | .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999764 467899998653211 0 0122345678888887642 3 34455544 3455689
Q ss_pred EecccCCC
Q 046265 541 LYEYLGRG 548 (639)
Q Consensus 541 v~e~~~~g 548 (639)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.83 E-value=7e-05 Score=76.23 Aligned_cols=141 Identities=21% Similarity=0.253 Sum_probs=78.6
Q ss_pred ceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhcccc--CceeeeEE------EEEcCCceeEEe
Q 046265 471 YCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRH--RNVVKFYG------FSFHPRQSFLLY 542 (639)
Q Consensus 471 ~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~~------~~~~~~~~~lv~ 542 (639)
..++.|..+.||+....+|+ +++|..... ...+..|+.++..+.. -.+++++. +....+..++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSGA-VCLKRIHRP------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTEE-EEEEEECSC------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCCC-EEEEecCCC------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 34556678999999876654 899988742 1223345555544431 12333332 112356789999
Q ss_pred cccCCCChh-----------H---Hhhc---CC--C------CCCcCHHHHH----------------------------
Q 046265 543 EYLGRGSLA-----------I---ILSN---DA--A------IDEFSWTVRM---------------------------- 569 (639)
Q Consensus 543 e~~~~g~L~-----------~---~l~~---~~--~------~~~~~~~~~~---------------------------- 569 (639)
||++|..+. . .++. .. . ...-.|....
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986542 0 0111 00 0 0012343211
Q ss_pred ---HHHHHHHHHHHHHHh----------CCCCCeEeecCCCCCeeeCCCCceEEcccccccc
Q 046265 570 ---NVIKSVANTLSYMHH----------DYFPPIVHRDISSKNVLLGLDYDAHVSDFGISKF 618 (639)
Q Consensus 570 ---~i~~~i~~~l~~lH~----------~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~ 618 (639)
.+...+..++++++. ...+.++|+|+++.||+++.++.+.|+||+.+..
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 011123345666653 1234899999999999998888899999998754
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.80 E-value=0.00015 Score=72.57 Aligned_cols=138 Identities=20% Similarity=0.202 Sum_probs=91.7
Q ss_pred cceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc---cCceeeeEEEEEcCCceeEEecccC
Q 046265 470 KYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR---HRNVVKFYGFSFHPRQSFLLYEYLG 546 (639)
Q Consensus 470 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~~lv~e~~~ 546 (639)
.+.++.|.+..+|+.... +..++||..... ....+.+|++.++.+. ...+++.++++...+..|+||||++
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 456899999999999864 567888886531 3566888999888874 2568889999888888999999999
Q ss_pred CCChhH--------H---hhcCCC-----CC--------------CcCHHHHH---HHHH----------------HHHH
Q 046265 547 RGSLAI--------I---LSNDAA-----ID--------------EFSWTVRM---NVIK----------------SVAN 577 (639)
Q Consensus 547 ~g~L~~--------~---l~~~~~-----~~--------------~~~~~~~~---~i~~----------------~i~~ 577 (639)
+..+.. . ++.... .+ .-+|.... ++.. .+.+
T Consensus 115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~ 194 (312)
T 3jr1_A 115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ 194 (312)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 876421 1 121111 00 12565432 1111 1111
Q ss_pred -HHHHHHh-CCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 046265 578 -TLSYMHH-DYFPPIVHRDISSKNVLLGLDYDAHVSDFG 614 (639)
Q Consensus 578 -~l~~lH~-~~~~~iiHrdlk~~Nill~~~~~~kl~DfG 614 (639)
..+.+.. ...|.+||+|+.+.|++++.++ +.|.|+.
T Consensus 195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1123321 2346899999999999999887 8899984
No 427
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.69 E-value=0.00033 Score=73.51 Aligned_cols=75 Identities=15% Similarity=0.092 Sum_probs=46.3
Q ss_pred cceeccCCCceEEEEEcCCCcEEEEEEccCCC----CC---hhhHHHHHHHHHHHhc-cccCceeeeEEEEEcCCceeEE
Q 046265 470 KYCIGTAGQASVYKAELPSWEIVAVKKFHSPH----PD---MVVQQAFSNEIKALTE-LRHRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 470 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~----~~---~~~~~~~~~e~~~l~~-l~H~niv~l~~~~~~~~~~~lv 541 (639)
.+.+|.|..+.||++.. +++.++||...... .. ...+..++.|+..+.. .....+.+++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 45689999999999964 45789999432110 00 1123344445443322 2234567777765 5677999
Q ss_pred eccc-CC
Q 046265 542 YEYL-GR 547 (639)
Q Consensus 542 ~e~~-~~ 547 (639)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.49 E-value=0.00026 Score=70.17 Aligned_cols=76 Identities=20% Similarity=0.190 Sum_probs=54.1
Q ss_pred CcceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccc-c--CceeeeEEEEEcCCceeEEeccc
Q 046265 469 AKYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR-H--RNVVKFYGFSFHPRQSFLLYEYL 545 (639)
Q Consensus 469 ~~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H--~niv~l~~~~~~~~~~~lv~e~~ 545 (639)
....+|.|..+.||+.+..+|+.|.||+-.... ......|.+|++.|+.+. . --+++.+++ +..++||||+
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l 92 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWV 92 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC--cchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEee
Confidence 345789999999999999999999999876432 122345788998888773 2 234455554 2347999998
Q ss_pred CCCCh
Q 046265 546 GRGSL 550 (639)
Q Consensus 546 ~~g~L 550 (639)
+++..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87643
No 429
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.08 E-value=0.0015 Score=66.02 Aligned_cols=32 Identities=31% Similarity=0.319 Sum_probs=27.2
Q ss_pred CCeEeecCCCCCeeeCCC----CceEEccccccccC
Q 046265 588 PPIVHRDISSKNVLLGLD----YDAHVSDFGISKFL 619 (639)
Q Consensus 588 ~~iiHrdlk~~Nill~~~----~~~kl~DfGla~~~ 619 (639)
+.++|+|+.+.||+++.+ +.+.|.||+.+...
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 478999999999999874 67899999887653
No 430
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.07 E-value=0.0056 Score=61.57 Aligned_cols=141 Identities=13% Similarity=0.145 Sum_probs=79.6
Q ss_pred eeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCc--eeeeEEE-----EEcCCceeEEecc
Q 046265 472 CIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN--VVKFYGF-----SFHPRQSFLLYEY 544 (639)
Q Consensus 472 ~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~-----~~~~~~~~lv~e~ 544 (639)
.++ |....||+....+|+.+++|..+.... ....+..|..++..+.... +++++.. ....+..+.||||
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence 466 778899999877787899999864321 2345667887777664222 3444443 1124456789999
Q ss_pred cCCCChh-----HH---------hhc----CC--CCCCcCHHHH----HHH---------------HHHHHHHHHHHHhC
Q 046265 545 LGRGSLA-----II---------LSN----DA--AIDEFSWTVR----MNV---------------IKSVANTLSYMHHD 585 (639)
Q Consensus 545 ~~~g~L~-----~~---------l~~----~~--~~~~~~~~~~----~~i---------------~~~i~~~l~~lH~~ 585 (639)
++|..+. .. ++. .. .....++... ..+ ...+.+.++.+...
T Consensus 109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (328)
T 1zyl_A 109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH 188 (328)
T ss_dssp CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9875432 00 111 00 0111222211 000 01111222233221
Q ss_pred ----CCCCeEeecCCCCCeeeCCCCceEEcccccccc
Q 046265 586 ----YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKF 618 (639)
Q Consensus 586 ----~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~ 618 (639)
..+.++|+|+++.||+++ + .+.++||+.+..
T Consensus 189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 223579999999999999 4 899999987654
No 431
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.97 E-value=0.0014 Score=65.81 Aligned_cols=158 Identities=12% Similarity=0.073 Sum_probs=85.0
Q ss_pred hHHHHHHHhccCCC-----cceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCc--eeee
Q 046265 456 LYEEVIRATNNFDA-----KYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN--VVKF 528 (639)
Q Consensus 456 ~~~~~~~~~~~f~~-----~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l 528 (639)
+.+++......|.. .+.++.|....+|+....+| .+++|...... ..+.+..|+.++..+.... +.++
T Consensus 8 ~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~----~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 8 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV----EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC----CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 44555555555543 23466677889999987665 57888876521 1223456777766654222 2333
Q ss_pred EEE------EEcCCceeEEecccCCCChhH----H----------hhcC--C-CC------CCcCHHHHHHH--------
Q 046265 529 YGF------SFHPRQSFLLYEYLGRGSLAI----I----------LSND--A-AI------DEFSWTVRMNV-------- 571 (639)
Q Consensus 529 ~~~------~~~~~~~~lv~e~~~~g~L~~----~----------l~~~--~-~~------~~~~~~~~~~i-------- 571 (639)
+.. ....+..+++|||++|..+.. . ++.. . .. ....|.....-
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 112356789999998865321 0 1110 0 00 01124331110
Q ss_pred ----HHHHHHHHHHHHhC----CCCCeEeecCCCCCeeeCCCCceEEcccccccc
Q 046265 572 ----IKSVANTLSYMHHD----YFPPIVHRDISSKNVLLGLDYDAHVSDFGISKF 618 (639)
Q Consensus 572 ----~~~i~~~l~~lH~~----~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~~ 618 (639)
...+.+.++++... ..+.++|+|+.+.||+++.+..+.|+||+.+..
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 01133445555432 123789999999999998876668999987643
No 432
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.96 E-value=0.0003 Score=63.41 Aligned_cols=88 Identities=15% Similarity=0.140 Sum_probs=42.0
Q ss_pred CCCCEEEcccCcCCCCCCcccCCCCCCCEEeeeccc-CccccCccccCCCCCCcccCCCCCcccCCCCccEEEccCC-cC
Q 046265 54 THLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCNG-LSGWLPSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSEN-QL 131 (639)
Q Consensus 54 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N-~l 131 (639)
.+|+.||++++.++..--..+..+++|++|+|+++. ++..--..++.+.+. .+ +|++|+|+++ ++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~-----------~~--~L~~L~Ls~C~~I 127 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENL-----------QK--SMLEMEIISCGNV 127 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHH-----------HH--HCCEEEEESCTTC
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccc-----------cC--CCCEEEcCCCCcC
Confidence 356666666666554333345566666666666663 442111111111000 00 1246666665 35
Q ss_pred cccCCccccCCCCCCEEeccCCC
Q 046265 132 SGSIPHFLGHLSNLAVLHLGDNS 154 (639)
Q Consensus 132 ~~~~p~~~~~l~~L~~L~L~~N~ 154 (639)
+..--..+.++++|++|+|+++.
T Consensus 128 TD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 128 TDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp CHHHHHHGGGCTTCCEEEEESCT
T ss_pred CHHHHHHHhcCCCCCEEECCCCC
Confidence 43222334556666666666653
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.89 E-value=0.0014 Score=56.24 Aligned_cols=61 Identities=21% Similarity=0.225 Sum_probs=32.0
Q ss_pred cceeeeEEEEeCCCccc-ccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCcC
Q 046265 3 CLAFFFFQVVHESNTLF-AIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNKL 66 (639)
Q Consensus 3 ~~~~~~~~~~~~~n~~~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~l 66 (639)
|.|. -..|+-+++++. ..+|..+. ++|++|+|++|.|+...+..|..+++|+.|+|++|.+
T Consensus 6 C~C~-~~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 6 CSCA-GTLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CEEE-TTEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CEEc-CCEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5553 234555555553 35554432 2456666666666544444555555555555555544
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.72 E-value=0.008 Score=59.70 Aligned_cols=71 Identities=14% Similarity=0.130 Sum_probs=43.0
Q ss_pred cceeccCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCce-eeeEEEEEcCCceeEEeccc-CC
Q 046265 470 KYCIGTAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNV-VKFYGFSFHPRQSFLLYEYL-GR 547 (639)
Q Consensus 470 ~~~ig~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~-~~ 547 (639)
.+.++.|....+|+. +.+++|......... ....+|+.+++.+....+ .+++++ ..+.-++|+||+ ++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~---~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g 92 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY---INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGA 92 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C---CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce---eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCC
Confidence 567888999999998 458888776421111 112457777766643233 355544 344457899999 65
Q ss_pred CCh
Q 046265 548 GSL 550 (639)
Q Consensus 548 g~L 550 (639)
.++
T Consensus 93 ~~l 95 (301)
T 3dxq_A 93 QTM 95 (301)
T ss_dssp EEC
T ss_pred ccC
Confidence 444
No 435
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.69 E-value=0.0045 Score=64.89 Aligned_cols=72 Identities=21% Similarity=0.241 Sum_probs=47.9
Q ss_pred ceeccCCCceEEEEEcCC--------CcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCce-eeeEEEEEcCCceeEE
Q 046265 471 YCIGTAGQASVYKAELPS--------WEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNV-VKFYGFSFHPRQSFLL 541 (639)
Q Consensus 471 ~~ig~g~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv 541 (639)
+.|+.|-...+|++..++ ++.+++|...... . .+.+.+|..+++.+...++ +++++.+.+ .+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v 150 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--T--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRL 150 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--C--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--c--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEE
Confidence 467788889999998653 4678899874321 1 1345578888887753334 566665432 389
Q ss_pred ecccCCCCh
Q 046265 542 YEYLGRGSL 550 (639)
Q Consensus 542 ~e~~~~g~L 550 (639)
|||++|..+
T Consensus 151 ~e~l~G~~l 159 (429)
T 1nw1_A 151 EEYIPSRPL 159 (429)
T ss_dssp ECCCCEEEC
T ss_pred EEEeCCccc
Confidence 999986443
No 436
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.67 E-value=0.00036 Score=62.88 Aligned_cols=93 Identities=12% Similarity=0.139 Sum_probs=62.1
Q ss_pred cCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEcccCc-CCCCCCcccCCC----CCCCEEeeeccc-Ccccc
Q 046265 21 IIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINVNK-LRGSVPREVGQL----SSLKQLVLYCNG-LSGWL 94 (639)
Q Consensus 21 ~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~ 94 (639)
.+|.....-.+|+.|||+++.++..-=..+..+++|++|+|+++. ++..--..+..+ ++|++|+|+++. ++..-
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~G 131 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKG 131 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHH
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHH
Confidence 456543334579999999999874333457889999999999995 664323345554 379999999874 76432
Q ss_pred CccccCCCCCCcccCCCCCcccCCCCccEEEccCCc
Q 046265 95 PSSFGNLNNLAIGSMPNSLSNLTSLSLFHLDLSENQ 130 (639)
Q Consensus 95 p~~~~~l~~L~~~~lp~~~~~l~~L~L~~L~L~~N~ 130 (639)
-..+..++ +| ++|+++++.
T Consensus 132 l~~L~~~~---------------~L--~~L~L~~c~ 150 (176)
T 3e4g_A 132 IIALHHFR---------------NL--KYLFLSDLP 150 (176)
T ss_dssp HHHGGGCT---------------TC--CEEEEESCT
T ss_pred HHHHhcCC---------------CC--CEEECCCCC
Confidence 23333343 33 689998874
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.45 E-value=0.005 Score=52.63 Aligned_cols=56 Identities=21% Similarity=0.260 Sum_probs=41.3
Q ss_pred EEEccCCcCc-ccCCccccCCCCCCEEeccCCCCCCCCCccccCCCcccEEEcccCcCC
Q 046265 123 HLDLSENQLS-GSIPHFLGHLSNLAVLHLGDNSLFGSIPPILGKVQSLLSLGFDLNLLN 180 (639)
Q Consensus 123 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 180 (639)
.++.+++.++ ..+|..+. ++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6788888875 35665443 46888888888888665667788888888888888664
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.25 E-value=0.013 Score=60.06 Aligned_cols=141 Identities=16% Similarity=0.175 Sum_probs=79.8
Q ss_pred ceeccCCCceEEEEEcCC--------CcEEEEEEccCCCCChhhHHHHHHHHHHHhccc-cCceeeeEEEEEcCCceeEE
Q 046265 471 YCIGTAGQASVYKAELPS--------WEIVAVKKFHSPHPDMVVQQAFSNEIKALTELR-HRNVVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 471 ~~ig~g~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv 541 (639)
+.+..|-...+|++..++ ++.|++|..... ........+|.++++.+. +.-..++++++.+ .+|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~---~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v 128 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI---LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRL 128 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc---cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccE
Confidence 456677788999998753 467899885321 112344568998888774 3223566666543 399
Q ss_pred ecccCCCChhHH-----------------hhcCC-C-CCCc--CHHHHHHHHHHHHH-------------------HHHH
Q 046265 542 YEYLGRGSLAII-----------------LSNDA-A-IDEF--SWTVRMNVIKSVAN-------------------TLSY 581 (639)
Q Consensus 542 ~e~~~~g~L~~~-----------------l~~~~-~-~~~~--~~~~~~~i~~~i~~-------------------~l~~ 581 (639)
|||++|..+..- ++... . .... -|.+..++..++.. .++.
T Consensus 129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 999987654311 11110 0 1111 24444444433321 2233
Q ss_pred HH----hC-CCCCeEeecCCCCCeeeCCC----CceEEcccccccc
Q 046265 582 MH----HD-YFPPIVHRDISSKNVLLGLD----YDAHVSDFGISKF 618 (639)
Q Consensus 582 lH----~~-~~~~iiHrdlk~~Nill~~~----~~~kl~DfGla~~ 618 (639)
+. .. ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 32 22 22368999999999999876 7899999987654
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.20 E-value=0.018 Score=60.73 Aligned_cols=73 Identities=16% Similarity=0.110 Sum_probs=45.2
Q ss_pred ceeccCCCceEEEEEcCC-CcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCce-eeeEEEEEcCCceeEEecccCCC
Q 046265 471 YCIGTAGQASVYKAELPS-WEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNV-VKFYGFSFHPRQSFLLYEYLGRG 548 (639)
Q Consensus 471 ~~ig~g~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~~~g 548 (639)
+.|+.|-...+|++...+ ++.+++|........... -.+|..++..+...++ .++++++. + ..||||++|.
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~id---R~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~ 186 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIIN---REREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGY 186 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSC---HHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcC---HHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCc
Confidence 467778888999998765 477888876432111111 1468888887754444 56676662 2 3599999875
Q ss_pred Ch
Q 046265 549 SL 550 (639)
Q Consensus 549 ~L 550 (639)
.+
T Consensus 187 ~l 188 (458)
T 2qg7_A 187 AL 188 (458)
T ss_dssp EC
T ss_pred cC
Confidence 44
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.01 E-value=0.011 Score=60.60 Aligned_cols=73 Identities=11% Similarity=0.038 Sum_probs=42.0
Q ss_pred ceeccCCCceEEEEEcCC---------CcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCc-eeeeEEEEEcCCceeE
Q 046265 471 YCIGTAGQASVYKAELPS---------WEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN-VVKFYGFSFHPRQSFL 540 (639)
Q Consensus 471 ~~ig~g~~g~vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~~~~~~~~~~~l 540 (639)
..++.|....+|+....+ ++.+++|...... .. ......|.+++..+...+ +.++++.. . -++
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~--~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~ 111 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DE--LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGR 111 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GG--TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cc--eecHHHHHHHHHHHHhcCCCCceEEec--C--CcE
Confidence 456777788999997654 2678888765321 11 111356777777765333 34666543 2 378
Q ss_pred EecccCCCCh
Q 046265 541 LYEYLGRGSL 550 (639)
Q Consensus 541 v~e~~~~g~L 550 (639)
||||++|..+
T Consensus 112 v~e~i~G~~l 121 (369)
T 3c5i_A 112 IEEWLYGDPL 121 (369)
T ss_dssp EEECCCSEEC
T ss_pred EEEEecCCcC
Confidence 9999987543
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.99 E-value=0.021 Score=57.66 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=27.0
Q ss_pred CCeEeecCCCCCeeeCCCCceEEcccccccc
Q 046265 588 PPIVHRDISSKNVLLGLDYDAHVSDFGISKF 618 (639)
Q Consensus 588 ~~iiHrdlk~~Nill~~~~~~kl~DfGla~~ 618 (639)
+.++|+|+.+.||+++.++.+.+.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 3789999999999999888899999976654
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.59 E-value=0.0022 Score=58.81 Aligned_cols=65 Identities=17% Similarity=0.194 Sum_probs=29.6
Q ss_pred cCCCCCCEEECcCC-CCcc----CCCCCCCCCCCCCEEEcccCcCCCC----CCcccCCCCCCCEEeeecccCc
Q 046265 27 GNISNLKFLDMGNN-QLSG----VIPQEIDPLTHLKHLYINVNKLRGS----VPREVGQLSSLKQLVLYCNGLS 91 (639)
Q Consensus 27 ~~l~~L~~L~Ls~n-~l~~----~~p~~~~~L~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 91 (639)
.+-+.|++|+|++| .|.. .+...+..=+.|+.|+|++|+|... +...+..-+.|++|+|+.|+|+
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 34455666666654 4431 1122233444555555555555421 2222223344555555555544
No 443
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.25 E-value=0.014 Score=53.53 Aligned_cols=60 Identities=13% Similarity=0.056 Sum_probs=27.6
Q ss_pred CCCCCEEeccCCccccc----CCccccCCCCCCeeeccCccCccc----CCcCccCCCCCCEEeCCCC
Q 046265 293 LYQLHKLDFSLNHIVGE----LPIELGNLKSLNYRALNGNKVYGS----LPRVLGSISDLEYLDLSTN 352 (639)
Q Consensus 293 l~~L~~L~Ls~N~~~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N 352 (639)
-+.|+.|+|++|+|... +...+..-+.|+.|+|+.|.|... +-..+..-+.|+.|+|++|
T Consensus 69 N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 69 SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred CCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 34556666666655422 112222334555555555555321 1122233345666666543
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.24 E-value=0.093 Score=53.96 Aligned_cols=144 Identities=17% Similarity=0.142 Sum_probs=78.7
Q ss_pred ceeccCCCceEEEEEcCC--------CcEEEEEEccCCCCC---------hhhH-------HHHHHHHHHHhccc-cCce
Q 046265 471 YCIGTAGQASVYKAELPS--------WEIVAVKKFHSPHPD---------MVVQ-------QAFSNEIKALTELR-HRNV 525 (639)
Q Consensus 471 ~~ig~g~~g~vy~~~~~~--------~~~vavK~~~~~~~~---------~~~~-------~~~~~e~~~l~~l~-H~ni 525 (639)
+.+..|-...+|++..++ .+.|.++..-..... ...+ +....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 345567777899987764 257888875431100 0111 12335888887775 4334
Q ss_pred eeeEEEEEcCCceeEEecccCCCChhH--H---------------hhcCC-C-CCCcC--HHHHHHHHHHHH--------
Q 046265 526 VKFYGFSFHPRQSFLLYEYLGRGSLAI--I---------------LSNDA-A-IDEFS--WTVRMNVIKSVA-------- 576 (639)
Q Consensus 526 v~l~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~~-~-~~~~~--~~~~~~i~~~i~-------- 576 (639)
.++++++.. .+|+||++|-.+.. + ++... . ..... |....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 566666542 28999998754421 1 11110 1 11222 223333332221
Q ss_pred --------------HHH----HHHHhC-CCCCeEeecCCCCCeeeCCC------CceEEcccccccc
Q 046265 577 --------------NTL----SYMHHD-YFPPIVHRDISSKNVLLGLD------YDAHVSDFGISKF 618 (639)
Q Consensus 577 --------------~~l----~~lH~~-~~~~iiHrdlk~~Nill~~~------~~~kl~DfGla~~ 618 (639)
+-+ +++... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223222 22367999999999999876 7899999987653
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.07 E-value=0.56 Score=48.60 Aligned_cols=73 Identities=10% Similarity=0.061 Sum_probs=45.1
Q ss_pred ceeccCCCceEEEEEcCC--------CcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCc-eeeeEEEEEcCCceeEE
Q 046265 471 YCIGTAGQASVYKAELPS--------WEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRN-VVKFYGFSFHPRQSFLL 541 (639)
Q Consensus 471 ~~ig~g~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~~~~~~~~~~~lv 541 (639)
+.+..|-...+|+....+ ++.|++|.......... +..+|.++++.+.-.+ ..++++.+ . -+.|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~i---dR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I 148 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFY---DSKVELDVFRYLSNINIAPNIIADF--P--EGRI 148 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCC---CHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhc---CHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEE
Confidence 456667788899997663 57789988643211111 1246777777764222 34555433 2 2789
Q ss_pred ecccCCCCh
Q 046265 542 YEYLGRGSL 550 (639)
Q Consensus 542 ~e~~~~g~L 550 (639)
|||++|..+
T Consensus 149 ~efI~G~~l 157 (424)
T 3mes_A 149 EEFIDGEPL 157 (424)
T ss_dssp EECCCSEEC
T ss_pred EEEeCCccC
Confidence 999998654
No 446
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=87.76 E-value=0.067 Score=56.43 Aligned_cols=57 Identities=7% Similarity=-0.062 Sum_probs=14.7
Q ss_pred CceEEEEEcCC-CcEEEE------EEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEEEc
Q 046265 478 QASVYKAELPS-WEIVAV------KKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFSFH 534 (639)
Q Consensus 478 ~g~vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 534 (639)
||.||+|.+.. ...||| |+.+...........|.+|+.++...+|||+++.+++...
T Consensus 152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 99999997764 357888 6665433233334568889999999999999999887653
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.59 E-value=1.8 Score=44.45 Aligned_cols=29 Identities=28% Similarity=0.427 Sum_probs=24.1
Q ss_pred eEeecCCCCCeee------CCCCceEEcccccccc
Q 046265 590 IVHRDISSKNVLL------GLDYDAHVSDFGISKF 618 (639)
Q Consensus 590 iiHrdlk~~Nill------~~~~~~kl~DfGla~~ 618 (639)
++|+|+.+.||++ +++..++++||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4457799999987654
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=80.06 E-value=4.2 Score=37.35 Aligned_cols=90 Identities=7% Similarity=0.060 Sum_probs=63.5
Q ss_pred cccCceeeeEEEEEcCCceeEEecccCCC-ChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCC
Q 046265 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRG-SLAIILSNDAAIDEFSWTVRMNVIKSVANTLSYMHHDYFPPIVHRDISSK 598 (639)
Q Consensus 520 l~H~niv~l~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iiHrdlk~~ 598 (639)
-.||+.+.. ..-.+.+.+.+.|+.-+.+ ++.. ++ ..+...+++++..++...++++.. +|--+.|+
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik------~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~ 108 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK------SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPD 108 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG------GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGG
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH------hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecc
Confidence 368888876 4555566666666643322 2222 22 345578888998888777666644 78889999
Q ss_pred CeeeCCCCceEEccccccccCCCC
Q 046265 599 NVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 599 Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
|+.++.++.+++.-.|+...+.+.
T Consensus 109 NL~f~~~~~p~i~~RGik~~l~P~ 132 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVVDPL 132 (215)
T ss_dssp GEEECTTSCEEESCCEETTTBSCC
T ss_pred eEEEcCCCCEEEEEccCccCCCCC
Confidence 999999999999999987666543
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=77.51 E-value=7.5 Score=35.80 Aligned_cols=90 Identities=7% Similarity=0.058 Sum_probs=61.2
Q ss_pred cccCceeeeEEEEEcCCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHHHHHHH-HHHhCCCCCeEeecCCCC
Q 046265 520 LRHRNVVKFYGFSFHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSVANTLS-YMHHDYFPPIVHRDISSK 598 (639)
Q Consensus 520 l~H~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~-~lH~~~~~~iiHrdlk~~ 598 (639)
-.||++ -...-.+++.+.+.|+--+++-=...++ ..+...+++++..++...+ +++.. +|--+.|+
T Consensus 47 ~~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 47 EVDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp GSCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred ccCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 357888 3333356667666666543433333332 2455778888888877665 44433 77889999
Q ss_pred CeeeCCCCceEEccccccccCCCC
Q 046265 599 NVLLGLDYDAHVSDFGISKFLKPD 622 (639)
Q Consensus 599 Nill~~~~~~kl~DfGla~~~~~~ 622 (639)
|+++|.++.+++.-.|+-..+.+.
T Consensus 114 NL~f~~~~~p~i~hRGi~~~lpP~ 137 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESLPPD 137 (219)
T ss_dssp GEEECTTCCEEESCCEETTTBSSC
T ss_pred eEEEeCCCcEEEEEcCCcccCCCC
Confidence 999999999999999987666543
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=43.86 E-value=66 Score=25.19 Aligned_cols=47 Identities=9% Similarity=0.087 Sum_probs=24.1
Q ss_pred CcccccCCccccCCCCCCEEECcCCCCccCCCCCCCCCCCCCEEEccc
Q 046265 16 NTLFAIIPPQIGNISNLKFLDMGNNQLSGVIPQEIDPLTHLKHLYINV 63 (639)
Q Consensus 16 n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~L~~L~~L~L~~ 63 (639)
..+..+-...|.+++.|+.+.+-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3444444455555666666655443 3334444555555555555543
No 451
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=37.65 E-value=2.5e+02 Score=29.99 Aligned_cols=83 Identities=20% Similarity=0.215 Sum_probs=48.7
Q ss_pred eeEEEEEcCCceeEEecccCCCChhHHhhcC----------CCCC----CcCHHHHHHHHHHHH--HHHHHHHhCCCCCe
Q 046265 527 KFYGFSFHPRQSFLLYEYLGRGSLAIILSND----------AAID----EFSWTVRMNVIKSVA--NTLSYMHHDYFPPI 590 (639)
Q Consensus 527 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----------~~~~----~~~~~~~~~i~~~i~--~~l~~lH~~~~~~i 590 (639)
+.|.+........ +.|++++.++.+++... .... ...|..+..+++.+| ..+.|+=. |
T Consensus 403 ~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG-----i 476 (614)
T 3ls8_A 403 TPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG-----V 476 (614)
T ss_dssp CCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----C
T ss_pred eccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----c
Confidence 3444444433333 45777765555554321 1111 123556666666654 34455442 2
Q ss_pred EeecCCCCCeeeCCCCceEEccccccc
Q 046265 591 VHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 591 iHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
+|=.++|||++.+|++-=+|||.+-
T Consensus 477 --gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 --GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --cCCCCcceeEcCCCCEeeeehHHhh
Confidence 3556899999999999999999874
No 452
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=36.27 E-value=2.2e+02 Score=30.98 Aligned_cols=45 Identities=29% Similarity=0.259 Sum_probs=31.6
Q ss_pred HHHHHHHHHHH--HHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccccc
Q 046265 566 TVRMNVIKSVA--NTLSYMHHDYFPPIVHRDISSKNVLLGLDYDAHVSDFGISK 617 (639)
Q Consensus 566 ~~~~~i~~~i~--~~l~~lH~~~~~~iiHrdlk~~Nill~~~~~~kl~DfGla~ 617 (639)
..+..+++.+| ..+.|+=.- +|=.++|||++.+|++--+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 34555665544 344454322 4777899999999999999999874
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=31.90 E-value=72 Score=24.94 Aligned_cols=49 Identities=12% Similarity=0.126 Sum_probs=38.2
Q ss_pred CCCCccCCCCCCCCCCCCCEEEcccCcCCCCCCcccCCCCCCCEEeeecc
Q 046265 39 NNQLSGVIPQEIDPLTHLKHLYINVNKLRGSVPREVGQLSSLKQLVLYCN 88 (639)
Q Consensus 39 ~n~l~~~~p~~~~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 88 (639)
+..++.+-..+|.++++|+.+.|..+ ++..-..+|.++.+|+.+.+...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34566666788999999999999875 44345668999999999998654
No 454
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=29.88 E-value=1.5e+02 Score=29.05 Aligned_cols=132 Identities=14% Similarity=0.152 Sum_probs=69.1
Q ss_pred cCCCceEEEEEcCCCcEEEEEEccCCCCChhhHHHHHHHHHHHhccccCceeeeEEEE----------------------
Q 046265 475 TAGQASVYKAELPSWEIVAVKKFHSPHPDMVVQQAFSNEIKALTELRHRNVVKFYGFS---------------------- 532 (639)
Q Consensus 475 ~g~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~---------------------- 532 (639)
++|.+.||.+.. ++..|+||... ....+.+..++...-.+.-|+.- ++.+.
T Consensus 78 ~~Gstgvff~~t-d~~~~VVK~s~-----~l~~E~l~s~LA~~LGlpiP~~R-iv~~~~~E~~e~~~~L~~~~~~~~~l~ 150 (342)
T 1cja_A 78 EKGTEGLFFVET-ESGVFIVKRST-----NIESETFCSLLCMRLGLHAPKVR-VVSSNSEEGTNMLECLAAIDKSFRVIT 150 (342)
T ss_dssp CSTTSCEEEEEE-SSCEEEEECCT-----THHHHHHHHHHHHHHTCCCCCEE-EEESSSHHHHHHHHHHHHHCSSSCHHH
T ss_pred cCCCCCeEEEEe-CCCEEEEeCcH-----HHHHHHHHHHHHHHhCCCCCCee-EEeeCcHHHHHHHHHHHHhhhhhHHHH
Confidence 344556666655 57789999542 23455566666655556655531 11111
Q ss_pred -EcCCceeEEecccCCCChhHHhhcCCCCCCcCHHHHHHHHHHH--HHHHHHHHhCCC-CCeEe-ecCCCCCeeeCCCCc
Q 046265 533 -FHPRQSFLLYEYLGRGSLAIILSNDAAIDEFSWTVRMNVIKSV--ANTLSYMHHDYF-PPIVH-RDISSKNVLLGLDYD 607 (639)
Q Consensus 533 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i--~~~l~~lH~~~~-~~iiH-rdlk~~Nill~~~~~ 607 (639)
...+..+++|||++|..|.+.-..... ..+.. +...++ .-+++....... .+.+. .-=.++|||++.++.
T Consensus 151 ~l~~~~~~l~meyv~G~~L~e~~~~~~~-~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~ 225 (342)
T 1cja_A 151 TLANQANILLMELVRGITLNKLTTTSAP-EVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA 225 (342)
T ss_dssp HHTTCSEEEEEECCCEEESTTCCSSSHH-HHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT
T ss_pred HhhcccceehhhhcCCCccccchhhhhh-hhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCC
Confidence 011235699999987665433211000 01111 122222 235555555432 12222 124688999987554
Q ss_pred -eEEcccccccc
Q 046265 608 -AHVSDFGISKF 618 (639)
Q Consensus 608 -~kl~DfGla~~ 618 (639)
+.++|-+.+..
T Consensus 226 ~~~~IDhn~af~ 237 (342)
T 1cja_A 226 TVVPIDSKIIPL 237 (342)
T ss_dssp CEEECSCCCCCC
T ss_pred eEEEEcCCcccc
Confidence 88999998865
Done!