Query 046266
Match_columns 174
No_of_seqs 170 out of 1079
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 10:20:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046266.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046266hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 8.1E-41 1.8E-45 278.0 16.9 158 2-170 186-347 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 1.7E-40 3.6E-45 272.4 16.0 155 2-167 155-313 (315)
3 cd01847 Triacylglycerol_lipase 100.0 2.4E-38 5.2E-43 255.8 14.4 149 3-169 133-281 (281)
4 PRK15381 pathogenicity island 100.0 1E-35 2.3E-40 250.0 16.0 147 4-171 254-403 (408)
5 cd01846 fatty_acyltransferase_ 100.0 9.5E-35 2.1E-39 232.9 15.6 147 3-167 123-269 (270)
6 COG3240 Phospholipase/lecithin 100.0 1.3E-27 2.7E-32 195.6 13.6 141 10-169 193-333 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.7 5.2E-18 1.1E-22 131.3 8.5 121 3-165 105-234 (234)
8 cd01841 NnaC_like NnaC (CMP-Ne 98.8 3.9E-08 8.4E-13 73.5 8.7 104 6-169 70-174 (174)
9 cd01836 FeeA_FeeB_like SGNH_hy 98.8 9.9E-08 2.2E-12 72.3 10.8 104 6-170 86-190 (191)
10 cd01834 SGNH_hydrolase_like_2 98.7 1.8E-07 3.9E-12 70.3 11.2 107 5-167 83-190 (191)
11 cd01828 sialate_O-acetylestera 98.7 9.3E-08 2E-12 71.2 8.2 100 6-169 67-168 (169)
12 cd01833 XynB_like SGNH_hydrola 98.7 2.1E-07 4.5E-12 68.4 9.6 98 6-169 59-157 (157)
13 cd01829 SGNH_hydrolase_peri2 S 98.7 1.7E-07 3.7E-12 71.5 9.2 111 5-170 89-199 (200)
14 cd01820 PAF_acetylesterase_lik 98.6 3.9E-07 8.6E-12 70.7 10.9 105 6-172 108-213 (214)
15 cd01838 Isoamyl_acetate_hydrol 98.6 1.9E-07 4.2E-12 70.6 8.2 111 6-169 87-199 (199)
16 cd04501 SGNH_hydrolase_like_4 98.6 4E-07 8.6E-12 68.5 9.1 106 6-169 78-183 (183)
17 cd01839 SGNH_arylesterase_like 98.6 4.5E-07 9.6E-12 69.8 9.1 102 6-171 100-207 (208)
18 cd00229 SGNH_hydrolase SGNH_hy 98.6 8.3E-07 1.8E-11 64.6 10.1 100 6-167 86-186 (187)
19 cd01821 Rhamnogalacturan_acety 98.4 7E-07 1.5E-11 68.2 7.0 110 5-169 88-198 (198)
20 cd04502 SGNH_hydrolase_like_7 98.4 2.4E-06 5.2E-11 63.7 9.7 102 6-169 69-171 (171)
21 PF13472 Lipase_GDSL_2: GDSL-l 98.4 9.6E-07 2.1E-11 64.8 6.5 98 4-161 82-179 (179)
22 cd01825 SGNH_hydrolase_peri1 S 98.3 1.5E-06 3.3E-11 65.4 6.9 112 6-172 76-188 (189)
23 cd01832 SGNH_hydrolase_like_1 98.3 3.8E-06 8.3E-11 63.1 8.7 98 5-167 86-184 (185)
24 cd01830 XynE_like SGNH_hydrola 98.3 4.9E-06 1.1E-10 64.0 9.0 102 5-166 100-201 (204)
25 cd04506 SGNH_hydrolase_YpmR_li 98.3 6.5E-06 1.4E-10 63.0 9.6 100 7-167 102-203 (204)
26 PRK10528 multifunctional acyl- 98.3 5.7E-06 1.2E-10 63.2 8.9 29 144-172 158-186 (191)
27 cd01822 Lysophospholipase_L1_l 98.2 1.5E-05 3.4E-10 59.2 8.6 26 145-170 152-177 (177)
28 cd01824 Phospholipase_B_like P 98.1 3.5E-05 7.6E-10 62.9 11.1 124 6-170 144-284 (288)
29 cd01823 SEST_like SEST_like. A 98.1 3.1E-05 6.8E-10 61.4 10.2 125 6-167 126-258 (259)
30 cd01844 SGNH_hydrolase_like_6 98.1 5E-05 1.1E-09 57.0 10.8 102 8-169 75-177 (177)
31 cd01827 sialate_O-acetylestera 98.1 3.1E-05 6.7E-10 58.3 8.6 100 6-170 88-188 (188)
32 cd01840 SGNH_hydrolase_yrhL_li 98.0 3.4E-05 7.3E-10 56.6 7.9 26 144-169 125-150 (150)
33 cd01835 SGNH_hydrolase_like_3 98.0 2.4E-05 5.2E-10 59.3 7.2 96 8-167 96-191 (193)
34 cd01831 Endoglucanase_E_like E 97.9 9.2E-05 2E-09 55.1 9.1 25 146-170 145-169 (169)
35 cd01826 acyloxyacyl_hydrolase_ 97.7 0.0011 2.3E-08 54.3 12.5 32 5-36 147-180 (305)
36 KOG3035 Isoamyl acetate-hydrol 97.7 0.00015 3.2E-09 56.4 6.4 115 6-172 95-211 (245)
37 COG2755 TesA Lysophospholipase 97.0 0.015 3.3E-07 44.6 10.8 28 146-173 185-212 (216)
38 PF14606 Lipase_GDSL_3: GDSL-l 95.0 0.022 4.7E-07 43.3 2.8 102 9-170 76-178 (178)
39 cd01842 SGNH_hydrolase_like_5 94.6 0.68 1.5E-05 35.3 10.0 22 148-169 161-182 (183)
40 COG2845 Uncharacterized protei 91.9 1.6 3.5E-05 36.3 8.8 110 9-171 207-319 (354)
41 PRK13384 delta-aminolevulinic 88.2 2.2 4.8E-05 35.3 6.8 64 8-88 58-121 (322)
42 cd00384 ALAD_PBGS Porphobilino 87.9 2.5 5.5E-05 34.8 7.0 65 7-88 47-111 (314)
43 PRK09283 delta-aminolevulinic 87.7 2.4 5.1E-05 35.2 6.7 64 8-88 56-119 (323)
44 cd04824 eu_ALAD_PBGS_cysteine_ 87.6 2.5 5.4E-05 34.9 6.7 65 8-88 48-114 (320)
45 cd04823 ALAD_PBGS_aspartate_ri 87.1 2.6 5.6E-05 34.9 6.6 66 7-88 50-116 (320)
46 PF08885 GSCFA: GSCFA family; 87.0 4.9 0.00011 32.2 8.1 81 6-97 147-227 (251)
47 PLN02757 sirohydrochlorine fer 85.5 3.2 7E-05 30.7 5.9 64 13-98 60-126 (154)
48 PF00490 ALAD: Delta-aminolevu 85.4 3.3 7.1E-05 34.4 6.4 64 9-88 55-119 (324)
49 PF02633 Creatininase: Creatin 79.9 10 0.00022 29.8 7.1 61 8-95 83-144 (237)
50 cd03416 CbiX_SirB_N Sirohydroc 78.6 6.4 0.00014 26.4 5.0 53 13-87 46-98 (101)
51 COG0113 HemB Delta-aminolevuli 72.6 6.1 0.00013 32.6 4.1 31 6-36 56-86 (330)
52 PF01903 CbiX: CbiX; InterPro 71.5 3.8 8.3E-05 27.6 2.4 55 13-89 39-93 (105)
53 PF08029 HisG_C: HisG, C-termi 70.4 4.3 9.2E-05 26.4 2.3 22 12-33 51-72 (75)
54 TIGR03455 HisG_C-term ATP phos 69.5 7.1 0.00015 26.7 3.4 23 11-33 74-96 (100)
55 PF04914 DltD_C: DltD C-termin 69.2 5.3 0.00012 28.8 2.8 29 143-171 101-129 (130)
56 PF06908 DUF1273: Protein of u 65.4 25 0.00054 26.6 5.9 55 6-87 24-78 (177)
57 PRK13660 hypothetical protein; 60.5 65 0.0014 24.5 7.4 61 6-93 24-84 (182)
58 PF13839 PC-Esterase: GDSL/SGN 59.8 34 0.00073 26.5 6.1 90 7-107 134-231 (263)
59 KOG4079 Putative mitochondrial 59.0 4.7 0.0001 29.4 0.9 16 22-37 42-57 (169)
60 cd03414 CbiX_SirB_C Sirohydroc 57.1 56 0.0012 22.3 6.2 18 13-30 47-64 (117)
61 KOG2794 Delta-aminolevulinic a 56.2 40 0.00088 27.6 5.8 64 9-88 67-131 (340)
62 KOG3670 Phospholipase [Lipid t 55.9 1.3E+02 0.0029 25.8 9.8 28 142-169 323-350 (397)
63 cd03311 CIMS_C_terminal_like C 54.1 49 0.0011 27.2 6.4 37 3-40 147-183 (332)
64 TIGR01091 upp uracil phosphori 50.6 61 0.0013 24.9 6.0 48 11-89 136-183 (207)
65 PRK09121 5-methyltetrahydropte 50.2 46 0.00099 27.8 5.6 34 3-37 148-181 (339)
66 COG1402 Uncharacterized protei 49.6 27 0.00059 28.0 3.9 27 7-33 86-112 (250)
67 COG1209 RfbA dTDP-glucose pyro 48.6 1E+02 0.0023 25.2 7.1 20 15-34 36-55 (286)
68 COG0276 HemH Protoheme ferro-l 45.8 94 0.002 25.9 6.6 79 13-98 104-201 (320)
69 COG0620 MetE Methionine syntha 45.5 89 0.0019 26.1 6.5 79 3-96 150-232 (330)
70 COG4822 CbiK Cobalamin biosynt 45.5 52 0.0011 26.1 4.8 91 14-119 63-178 (265)
71 PF08331 DUF1730: Domain of un 44.3 75 0.0016 20.4 4.8 65 22-87 8-77 (78)
72 cd03413 CbiK_C Anaerobic cobal 43.9 32 0.00069 23.5 3.1 18 13-30 44-61 (103)
73 PRK00129 upp uracil phosphorib 43.4 86 0.0019 24.1 5.8 22 12-33 139-160 (209)
74 PRK06520 5-methyltetrahydropte 43.2 36 0.00078 28.7 4.0 35 3-38 162-196 (368)
75 PF06812 ImpA-rel_N: ImpA-rela 42.7 9.5 0.00021 23.5 0.3 8 147-154 53-60 (62)
76 COG4474 Uncharacterized protei 41.0 1.6E+02 0.0034 22.4 7.6 57 6-89 24-80 (180)
77 cd03415 CbiX_CbiC Archaeal sir 41.0 35 0.00077 24.2 3.1 20 12-31 45-64 (125)
78 PRK05222 5-methyltetrahydropte 40.8 1.1E+02 0.0024 28.6 7.0 34 3-37 573-606 (758)
79 cd03411 Ferrochelatase_N Ferro 40.6 39 0.00084 24.8 3.4 23 13-35 101-123 (159)
80 PRK06233 hypothetical protein; 40.5 43 0.00092 28.4 4.0 35 3-38 163-197 (372)
81 COG4531 ZnuA ABC-type Zn2+ tra 38.8 84 0.0018 25.8 5.2 45 52-97 179-227 (318)
82 cd03412 CbiK_N Anaerobic cobal 38.1 44 0.00095 23.6 3.2 52 10-86 55-106 (127)
83 PRK13717 conjugal transfer pro 37.9 62 0.0014 23.2 3.8 26 52-78 70-95 (128)
84 cd00419 Ferrochelatase_C Ferro 36.9 1.6E+02 0.0034 21.1 7.0 38 13-62 79-116 (135)
85 PF07555 NAGidase: beta-N-acet 36.6 49 0.0011 27.4 3.7 25 7-31 87-111 (306)
86 COG3581 Uncharacterized protei 36.5 59 0.0013 28.0 4.1 46 20-89 328-373 (420)
87 PF08351 DUF1726: Domain of un 35.8 19 0.00041 24.2 1.0 47 22-70 36-82 (92)
88 TIGR00109 hemH ferrochelatase. 34.3 1.9E+02 0.004 23.9 6.8 23 13-35 106-128 (322)
89 PLN02541 uracil phosphoribosyl 33.6 1.3E+02 0.0027 24.1 5.4 48 11-89 171-220 (244)
90 PF11281 DUF3083: Protein of u 32.7 91 0.002 25.8 4.5 56 53-109 82-139 (316)
91 PF13377 Peripla_BP_3: Peripla 32.6 40 0.00087 23.7 2.3 16 17-32 1-16 (160)
92 PRK09240 thiH thiamine biosynt 32.4 1.8E+02 0.0038 24.6 6.5 24 9-32 105-128 (371)
93 PRK05481 lipoyl synthase; Prov 32.2 2.8E+02 0.006 22.5 8.5 24 10-33 82-105 (289)
94 cd03409 Chelatase_Class_II Cla 31.9 64 0.0014 21.1 3.1 22 12-33 46-67 (101)
95 COG0407 HemE Uroporphyrinogen- 31.1 3.3E+02 0.0071 23.1 8.1 79 4-98 182-262 (352)
96 TIGR02744 TrbI_Ftype type-F co 31.0 85 0.0018 22.0 3.6 26 52-78 57-82 (112)
97 PRK00923 sirohydrochlorin coba 30.5 67 0.0015 22.3 3.1 20 12-31 47-66 (126)
98 COG1182 AcpD Acyl carrier prot 30.0 70 0.0015 24.9 3.3 26 64-90 20-45 (202)
99 PRK04326 methionine synthase; 29.6 1.9E+02 0.0042 23.6 6.2 35 3-38 153-187 (330)
100 TIGR02351 thiH thiazole biosyn 29.5 1.8E+02 0.004 24.4 6.1 23 10-32 105-127 (366)
101 PF00762 Ferrochelatase: Ferro 29.1 3E+02 0.0066 22.7 7.2 78 13-97 102-199 (316)
102 PF12108 SF3a60_bindingd: Spli 28.7 46 0.00099 17.3 1.5 13 162-174 9-21 (28)
103 PF04026 SpoVG: SpoVG; InterP 28.3 48 0.001 21.9 1.9 26 146-171 56-82 (84)
104 cd03312 CIMS_N_terminal_like C 28.0 91 0.002 26.2 4.0 35 3-38 174-208 (360)
105 PF04672 Methyltransf_19: S-ad 27.5 1.1E+02 0.0024 24.8 4.2 22 13-34 56-78 (267)
106 TIGR01371 met_syn_B12ind 5-met 27.3 2.2E+02 0.0048 26.6 6.6 34 3-37 567-600 (750)
107 PF08092 Toxin_22: Magi peptid 27.2 27 0.00058 19.5 0.4 12 137-149 18-29 (38)
108 PLN02475 5-methyltetrahydropte 26.7 2.8E+02 0.0061 26.1 7.2 34 3-37 578-611 (766)
109 TIGR00762 DegV EDD domain prot 26.6 3E+02 0.0064 22.0 6.6 54 11-92 65-118 (275)
110 cd01823 SEST_like SEST_like. A 26.4 1.3E+02 0.0028 23.3 4.5 36 56-92 123-158 (259)
111 PRK12928 lipoyl synthase; Prov 26.3 3.6E+02 0.0078 22.0 7.2 24 10-33 89-112 (290)
112 cd01401 PncB_like Nicotinate p 26.2 1.1E+02 0.0024 26.1 4.2 22 69-91 237-259 (377)
113 COG1031 Uncharacterized Fe-S o 26.1 61 0.0013 28.6 2.6 21 10-30 217-237 (560)
114 PF03481 SUA5: Putative GTP-bi 25.9 1.2E+02 0.0026 21.1 3.8 33 4-36 78-110 (125)
115 PF12048 DUF3530: Protein of u 25.9 1.1E+02 0.0024 25.2 4.0 31 4-34 171-201 (310)
116 PF01717 Meth_synt_2: Cobalami 25.8 1E+02 0.0022 25.2 3.9 33 3-36 146-178 (324)
117 PRK07360 FO synthase subunit 2 24.4 2.7E+02 0.006 23.4 6.3 24 9-32 92-115 (371)
118 PF12872 OST-HTH: OST-HTH/LOTU 24.0 1.5E+02 0.0031 18.2 3.6 29 82-112 23-51 (74)
119 cd04506 SGNH_hydrolase_YpmR_li 23.6 2.1E+02 0.0045 21.2 5.0 31 58-89 100-130 (204)
120 TIGR00106 uncharacterized prot 23.5 2E+02 0.0042 19.4 4.3 25 6-30 48-72 (97)
121 PF01910 DUF77: Domain of unkn 23.3 1.8E+02 0.0039 19.3 4.1 25 6-30 46-70 (92)
122 TIGR00677 fadh2_euk methylenet 23.2 1.1E+02 0.0024 24.8 3.6 22 11-32 74-95 (281)
123 PF04690 YABBY: YABBY protein; 23.1 1.7E+02 0.0037 22.1 4.2 42 57-104 124-165 (170)
124 PF06230 DUF1009: Protein of u 23.0 2.1E+02 0.0046 22.4 4.9 76 15-98 3-82 (214)
125 PF02645 DegV: Uncharacterised 23.0 2.9E+02 0.0062 22.1 5.9 26 9-34 64-89 (280)
126 cd05015 SIS_PGI_1 Phosphogluco 23.0 1.4E+02 0.0031 21.7 3.8 29 8-36 2-31 (158)
127 TIGR00125 cyt_tran_rel cytidyl 22.7 95 0.0021 18.5 2.5 20 147-169 7-26 (66)
128 PRK13555 azoreductase; Provisi 22.5 1.2E+02 0.0027 23.3 3.6 29 62-91 18-47 (208)
129 PRK07807 inosine 5-monophospha 22.3 1.5E+02 0.0032 26.2 4.3 61 11-98 226-288 (479)
130 PF09677 TrbI_Ftype: Type-F co 22.3 1.5E+02 0.0032 20.6 3.6 26 52-78 56-81 (111)
131 KOG4175 Tryptophan synthase al 22.2 89 0.0019 24.6 2.6 25 12-36 111-135 (268)
132 PRK05321 nicotinate phosphorib 22.2 1.5E+02 0.0033 25.5 4.3 24 69-93 240-264 (400)
133 cd07208 Pat_hypo_Ecoli_yjju_li 22.0 3.7E+02 0.0081 21.1 6.4 22 17-38 165-186 (266)
134 PF00571 CBS: CBS domain CBS d 21.6 1.3E+02 0.0027 17.1 2.8 22 12-33 17-38 (57)
135 TIGR00510 lipA lipoate synthas 21.6 4.6E+02 0.01 21.6 7.4 23 11-33 94-116 (302)
136 PRK09432 metF 5,10-methylenete 21.1 1.3E+02 0.0028 24.6 3.5 22 11-32 97-118 (296)
137 COG3854 SpoIIIAA ncharacterize 21.0 1.5E+02 0.0033 24.0 3.8 85 8-117 120-206 (308)
138 cd00537 MTHFR Methylenetetrahy 20.4 1.4E+02 0.0029 23.9 3.5 25 11-35 73-98 (274)
139 PRK08444 hypothetical protein; 20.4 4.2E+02 0.0092 22.3 6.6 24 9-32 81-104 (353)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=8.1e-41 Score=277.95 Aligned_cols=158 Identities=23% Similarity=0.445 Sum_probs=139.2
Q ss_pred ccchHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCccccccccc--CcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 046266 2 FPGLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVS--SYENCSESLNSASKFHNQLLEQEILQNFNNESK 79 (174)
Q Consensus 2 ~~~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~--~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~ 79 (174)
+++|++.+++.+.+.|++||++|||+|+|+|+||+||+|..+... +..+|.+.+|.+++.||++|++++ ++|++++|
T Consensus 186 ~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l-~~L~~~~p 264 (351)
T PLN03156 186 VSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLV-TKLNKELP 264 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHH-HHHHHhCC
Confidence 356888899999999999999999999999999999999876432 345799999999999999999999 99999999
Q ss_pred CCeEEEecchHHHHHHHhccccCCCCcccccccccccccc--CCccccCCCCCCCCcccccCCCCCCceecCCCChhHHH
Q 046266 80 RPVIFTLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGV--SKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNG 157 (174)
Q Consensus 80 ~~~i~~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~--~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~ 157 (174)
+++|+++|+|+++.++++| |++|||++++.+||++. +....|++ .....|.+|++|+|||++|||+++
T Consensus 265 g~~i~~~D~y~~~~~ii~n----P~~yGf~~~~~aCCg~g~~~~~~~C~~------~~~~~C~~p~~yvfWD~~HPTe~a 334 (351)
T PLN03156 265 GIKLVFSNPYDIFMQIIRN----PSAYGFEVTSVACCATGMFEMGYLCNR------NNPFTCSDADKYVFWDSFHPTEKT 334 (351)
T ss_pred CCeEEEEehHHHHHHHHhC----ccccCcccCCccccCCCCCCCccccCC------CCCCccCCccceEEecCCCchHHH
Confidence 9999999999999999999 99999999999999432 12345663 222579999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 046266 158 WHAVFSELQSSLR 170 (174)
Q Consensus 158 h~~iA~~~~~~l~ 170 (174)
|+++|+.+...|.
T Consensus 335 ~~~iA~~~~~~l~ 347 (351)
T PLN03156 335 NQIIANHVVKTLL 347 (351)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=1.7e-40 Score=272.38 Aligned_cols=155 Identities=23% Similarity=0.509 Sum_probs=137.9
Q ss_pred ccchHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCccccccccc--CcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 046266 2 FPGLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVS--SYENCSESLNSASKFHNQLLEQEILQNFNNESK 79 (174)
Q Consensus 2 ~~~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~--~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~ 79 (174)
+.++++.++++|.++|++||++|||+|+|+|+||+||+|..+... +..+|.+.++.+++.||.+|++++ ++|++++|
T Consensus 155 ~~~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l-~~l~~~~~ 233 (315)
T cd01837 155 VEAYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLL-AELRRELP 233 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHH-HHHHhcCC
Confidence 356899999999999999999999999999999999999987653 345899999999999999999999 99999999
Q ss_pred CCeEEEecchHHHHHHHhccccCCCCccccccccccccccC--CccccCCCCCCCCcccccCCCCCCceecCCCChhHHH
Q 046266 80 RPVIFTLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVS--KDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNG 157 (174)
Q Consensus 80 ~~~i~~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~--~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~ 157 (174)
+++|+++|+|+++.++++| |++|||+++.++||+... ....|+. +....|.+|++|+|||++|||+++
T Consensus 234 ~~~i~~~D~y~~~~~i~~n----p~~yGf~~~~~aCc~~g~~~~~~~c~~------~~~~~C~~p~~y~fwD~~HpT~~~ 303 (315)
T cd01837 234 GAKFVYADIYNALLDLIQN----PAKYGFENTLKACCGTGGPEGGLLCNP------CGSTVCPDPSKYVFWDGVHPTEAA 303 (315)
T ss_pred CcEEEEEehhHHHHHHHhC----hhhcCCcCCCcCccCCCCCCcccccCC------CCCCcCCCccceEEeCCCChHHHH
Confidence 9999999999999999999 999999999999994321 1234543 234689999999999999999999
Q ss_pred HHHHHHHHHH
Q 046266 158 WHAVFSELQS 167 (174)
Q Consensus 158 h~~iA~~~~~ 167 (174)
|++||+.+..
T Consensus 304 ~~~ia~~~~~ 313 (315)
T cd01837 304 NRIIADALLS 313 (315)
T ss_pred HHHHHHHHhc
Confidence 9999998764
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=2.4e-38 Score=255.79 Aligned_cols=149 Identities=17% Similarity=0.260 Sum_probs=131.0
Q ss_pred cchHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCe
Q 046266 3 PGLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPV 82 (174)
Q Consensus 3 ~~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~ 82 (174)
.++++.+++++..+|++|+++|||+|+|+|+||+||+|..+... ..|.+.++.++..||.+|++++ ++|+.+ +
T Consensus 133 ~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~--~~~~~~~n~~~~~~N~~L~~~l-~~l~~~----~ 205 (281)
T cd01847 133 VAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP--AAAAALASALSQTYNQTLQSGL-NQLGAN----N 205 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc--chhHHHHHHHHHHHHHHHHHHH-HhccCC----e
Confidence 46889999999999999999999999999999999999887653 2688899999999999999999 988754 8
Q ss_pred EEEecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHH
Q 046266 83 IFTLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVF 162 (174)
Q Consensus 83 i~~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA 162 (174)
|+++|+|+++.++++| |++|||++++++|| +.+..+.|+. .....|.+|++|+|||++|||+++|++||
T Consensus 206 i~~~D~~~~~~~i~~n----P~~yGf~~~~~~CC-~~~~~~~~~~------~~~~~c~~~~~y~fwD~~HpTe~~~~~ia 274 (281)
T cd01847 206 IIYVDTATLLKEVVAN----PAAYGFTNTTTPAC-TSTSAAGSGA------ATLVTAAAQSTYLFADDVHPTPAGHKLIA 274 (281)
T ss_pred EEEEEHHHHHHHHHhC----hHhcCccCCCcccc-CCCCcccccc------ccccCCCCccceeeccCCCCCHHHHHHHH
Confidence 9999999999999999 99999999999999 4333444542 22357999999999999999999999999
Q ss_pred HHHHHHH
Q 046266 163 SELQSSL 169 (174)
Q Consensus 163 ~~~~~~l 169 (174)
+.+.+.|
T Consensus 275 ~~~~~~l 281 (281)
T cd01847 275 QYALSRL 281 (281)
T ss_pred HHHHHhC
Confidence 9988754
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=1e-35 Score=250.03 Aligned_cols=147 Identities=18% Similarity=0.193 Sum_probs=129.5
Q ss_pred chHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeE
Q 046266 4 GLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVI 83 (174)
Q Consensus 4 ~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i 83 (174)
++++.+++++..+|++||++|||+|+|+|+||+||+|..+... ..+.+|.++..||++|++++ ++|++++|+++|
T Consensus 254 ~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~~----~~~~~N~~a~~fN~~L~~~L-~~L~~~~pg~~i 328 (408)
T PRK15381 254 DNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHSD----EKRKLKDESIAHNALLKTNV-EELKEKYPQHKI 328 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhccC----chHHHHHHHHHHHHHHHHHH-HHHHHhCCCCEE
Confidence 5688999999999999999999999999999999999887432 35789999999999999999 999999999999
Q ss_pred EEecchHHHHHHHhccccCCCCccccccccccccccC---CccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHH
Q 046266 84 FTLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVS---KDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHA 160 (174)
Q Consensus 84 ~~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~---~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~ 160 (174)
+++|+|+++.++++| |++|||++++. ||+ .| ....|.+ ....|. +|+|||.+|||+++|++
T Consensus 329 vy~D~y~~~~~ii~n----P~~yGF~~~~~-cCg-~G~~~~~~~C~p-------~~~~C~---~YvFWD~vHPTe~ah~i 392 (408)
T PRK15381 329 CYYETADAFKVIMEA----ASNIGYDTENP-YTH-HGYVHVPGAKDP-------QLDICP---QYVFNDLVHPTQEVHHC 392 (408)
T ss_pred EEEEhHHHHHHHHhC----HHhcCCCcccc-ccC-CCccCCccccCc-------ccCCCC---ceEecCCCCChHHHHHH
Confidence 999999999999999 99999999876 983 33 2245653 345784 99999999999999999
Q ss_pred HHHHHHHHHHH
Q 046266 161 VFSELQSSLRI 171 (174)
Q Consensus 161 iA~~~~~~l~~ 171 (174)
+|+.+...|..
T Consensus 393 iA~~~~~~i~~ 403 (408)
T PRK15381 393 FAIMLESFIAH 403 (408)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=9.5e-35 Score=232.89 Aligned_cols=147 Identities=17% Similarity=0.288 Sum_probs=131.9
Q ss_pred cchHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCe
Q 046266 3 PGLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPV 82 (174)
Q Consensus 3 ~~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~ 82 (174)
..+++.+++++.++|++|+++|+|+|+|+++||++|+|.++...... .+.++.+++.||++|++++ ++|++++|+++
T Consensus 123 ~~~~~~~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~~~--~~~~~~~~~~~N~~L~~~l-~~l~~~~~~~~ 199 (270)
T cd01846 123 DTLVTRAVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGDAV--AARATALTAAYNAKLAEKL-AELKAQHPGVN 199 (270)
T ss_pred cccHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCccc--HHHHHHHHHHHHHHHHHHH-HHHHHhCCCCe
Confidence 46789999999999999999999999999999999999988764321 2689999999999999999 99999999999
Q ss_pred EEEecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHH
Q 046266 83 IFTLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVF 162 (174)
Q Consensus 83 i~~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA 162 (174)
|.++|+|+++.+++++ |++|||+++..+||++ +. |. +....|.+|++|+|||++|||+++|++||
T Consensus 200 i~~~D~~~~~~~~~~~----p~~yGf~~~~~~C~~~-~~---~~-------~~~~~c~~~~~y~fwD~~HpT~~~~~~iA 264 (270)
T cd01846 200 ILLFDTNALFNDILDN----PAAYGFTNVTDPCLDY-VY---SY-------SPREACANPDKYLFWDEVHPTTAVHQLIA 264 (270)
T ss_pred EEEEEhHHHHHHHHhC----HHhcCCCcCcchhcCC-Cc---cc-------cccCCCCCccceEEecCCCccHHHHHHHH
Confidence 9999999999999999 9999999999999943 21 43 23478999999999999999999999999
Q ss_pred HHHHH
Q 046266 163 SELQS 167 (174)
Q Consensus 163 ~~~~~ 167 (174)
+.+.+
T Consensus 265 ~~~~~ 269 (270)
T cd01846 265 EEVAA 269 (270)
T ss_pred HHHHh
Confidence 98875
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=99.95 E-value=1.3e-27 Score=195.57 Aligned_cols=141 Identities=16% Similarity=0.302 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEecch
Q 046266 10 IGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLDLY 89 (174)
Q Consensus 10 v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D~~ 89 (174)
..++...|++|.++|||+|+|+++||++.+|...... .-...+.+++..||+.|.+.| ++++ .+|+.+|++
T Consensus 193 ~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~---~~~~~a~~~t~~~Na~L~~~L-~~~g-----~nIi~iD~~ 263 (370)
T COG3240 193 KADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYG---TEAIQASQATIAFNASLTSQL-EQLG-----GNIIRIDTY 263 (370)
T ss_pred hhHHHHHHHHHHHhhccEEEEeecccccccccccccc---chHHHHHHHHHHHHHHHHHHH-HHhc-----CcEEEeEhH
Confidence 4569999999999999999999999999999988653 223378899999999999999 8764 789999999
Q ss_pred HHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHHHHHHH
Q 046266 90 GAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSELQSSL 169 (174)
Q Consensus 90 ~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~~~~~l 169 (174)
++|++++.| |++|||+|++..||...-..-.|... ....|..|++|+|||.+|||+++|++||+.+...|
T Consensus 264 ~llk~im~n----Pa~fGlant~~~~c~~~~~~~~~~a~------~p~~~~~~~~ylFaD~vHPTt~~H~liAeyila~l 333 (370)
T COG3240 264 TLLKEIMTN----PAEFGLANTTAPACDATVSNPACSAS------LPALCAAPQKYLFADSVHPTTAVHHLIAEYILARL 333 (370)
T ss_pred HHHHHHHhC----HHhcCcccCCCcccCcccCCcccccc------cccccCCccceeeecccCCchHHHHHHHHHHHHHH
Confidence 999999999 99999999999998432111134431 11345567889999999999999999999998887
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.74 E-value=5.2e-18 Score=131.25 Aligned_cols=121 Identities=22% Similarity=0.451 Sum_probs=103.3
Q ss_pred cchHHHHHHHHHHHHHHHHHCCCC-----eEEEecCCCCCccccccccc-CcCcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 046266 3 PGLTKSIIGQLAMNLKLILDLGVP-----KIAVTSMEPMGCLPQLSAVS-SYENCSESLNSASKFHNQLLEQEILQNFNN 76 (174)
Q Consensus 3 ~~~v~~~v~~i~~~v~~L~~~Gar-----~~~v~nlpplg~~P~~~~~~-~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~ 76 (174)
...++.+++++.+.|++|++.|+| +++++++||+++.|...... ....|.+.++..+..||..|++.+ .+++.
T Consensus 105 ~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~~-~~l~~ 183 (234)
T PF00657_consen 105 NTSVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNKDSASCIERLNAIVAAFNSALREVA-AQLRK 183 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHTTTCTTHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred hhhHhhHhhhhhhhhhHHhccCCccccccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHh-hhccc
Confidence 356788999999999999999999 99999999999988765543 245799999999999999999999 99987
Q ss_pred hCC-CCeEEEecchHHHHHH--HhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCCh
Q 046266 77 ESK-RPVIFTLDLYGAFMSA--LMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHP 153 (174)
Q Consensus 77 ~~~-~~~i~~~D~~~~~~~i--~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HP 153 (174)
.++ +.++.++|+++.+.+. ..+ |.. ++|+|||++||
T Consensus 184 ~~~~~~~v~~~D~~~~~~~~~~~~~----~~~-------------------------------------~~~~~~D~~Hp 222 (234)
T PF00657_consen 184 DYPKGANVPYFDIYSIFSDMYGIQN----PEN-------------------------------------DKYMFWDGVHP 222 (234)
T ss_dssp CHHHHCTEEEEEHHHHHHHHHHHHH----GGH-------------------------------------HHCBBSSSSSB
T ss_pred ccccCCceEEEEHHHHHHHhhhccC----ccc-------------------------------------ceeccCCCcCC
Confidence 776 8899999999999998 554 332 36899999999
Q ss_pred hHHHHHHHHHHH
Q 046266 154 SQNGWHAVFSEL 165 (174)
Q Consensus 154 T~~~h~~iA~~~ 165 (174)
|+++|++||+.|
T Consensus 223 t~~g~~~iA~~i 234 (234)
T PF00657_consen 223 TEKGHKIIAEYI 234 (234)
T ss_dssp -HHHHHHHHHHH
T ss_pred CHHHHHHHHcCC
Confidence 999999999975
No 8
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=98.79 E-value=3.9e-08 Score=73.52 Aligned_cols=104 Identities=16% Similarity=0.149 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHC-CCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046266 6 TKSIIGQLAMNLKLILDL-GVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIF 84 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~-Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~ 84 (174)
.+...+++...++++.+. ...+++++++||..-.+. +....+.....||+.+++.. .+ ..+.
T Consensus 70 ~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~---------~~~~~~~~~~~~n~~l~~~a-~~-------~~~~ 132 (174)
T cd01841 70 SNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE---------IKTRSNTRIQRLNDAIKELA-PE-------LGVT 132 (174)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc---------cccCCHHHHHHHHHHHHHHH-HH-------CCCE
Confidence 456778888888888765 356799999988753322 11223556788999988876 33 2378
Q ss_pred EecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHH
Q 046266 85 TLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSE 164 (174)
Q Consensus 85 ~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~ 164 (174)
++|+++.+.+. + +. ....+..|++|||++||++||+.
T Consensus 133 ~id~~~~~~~~--~-------------------~~----------------------~~~~~~~DglH~n~~Gy~~~a~~ 169 (174)
T cd01841 133 FIDLNDVLVDE--F-------------------GN----------------------LKKEYTTDGLHFNPKGYQKLLEI 169 (174)
T ss_pred EEEcHHHHcCC--C-------------------CC----------------------ccccccCCCcccCHHHHHHHHHH
Confidence 99999876321 1 10 01245689999999999999999
Q ss_pred HHHHH
Q 046266 165 LQSSL 169 (174)
Q Consensus 165 ~~~~l 169 (174)
+.+.|
T Consensus 170 l~~~~ 174 (174)
T cd01841 170 LEEYL 174 (174)
T ss_pred HHhhC
Confidence 98764
No 9
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.78 E-value=9.9e-08 Score=72.32 Aligned_cols=104 Identities=23% Similarity=0.320 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046266 6 TKSIIGQLAMNLKLILD-LGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIF 84 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~-~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~ 84 (174)
.+....++.+.|+++.+ ....+|+++++||++..|.... .....+++....+|+.+++.. + ++ ..+.
T Consensus 86 ~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~a-~----~~--~~~~ 153 (191)
T cd01836 86 IARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ-----PLRWLLGRRARLLNRALERLA-S----EA--PRVT 153 (191)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH-----HHHHHHHHHHHHHHHHHHHHH-h----cC--CCeE
Confidence 45677888888888876 3456799999999987653321 122344556677887777666 3 22 2566
Q ss_pred EecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHH
Q 046266 85 TLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSE 164 (174)
Q Consensus 85 ~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~ 164 (174)
++|++..+. ..++..|++|||++||+++|+.
T Consensus 154 ~id~~~~~~-------------------------------------------------~~~~~~DglHpn~~Gy~~~a~~ 184 (191)
T cd01836 154 LLPATGPLF-------------------------------------------------PALFASDGFHPSAAGYAVWAEA 184 (191)
T ss_pred EEecCCccc-------------------------------------------------hhhccCCCCCCChHHHHHHHHH
Confidence 777654321 1234569999999999999999
Q ss_pred HHHHHH
Q 046266 165 LQSSLR 170 (174)
Q Consensus 165 ~~~~l~ 170 (174)
+.+.|+
T Consensus 185 l~~~i~ 190 (191)
T cd01836 185 LAPAIA 190 (191)
T ss_pred HHHHHh
Confidence 998875
No 10
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.74 E-value=1.8e-07 Score=70.31 Aligned_cols=107 Identities=13% Similarity=0.104 Sum_probs=74.5
Q ss_pred hHHHHHHHHHHHHHHHH-HCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeE
Q 046266 5 LTKSIIGQLAMNLKLIL-DLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVI 83 (174)
Q Consensus 5 ~v~~~v~~i~~~v~~L~-~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i 83 (174)
.......++...|+.+. .....+|++++.||....+... .-....+.....||+.|++.. ++ ..+
T Consensus 83 ~~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~------~~~~~~~~~~~~~n~~l~~~a-~~-------~~~ 148 (191)
T cd01834 83 GLEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPL------PDGAEYNANLAAYADAVRELA-AE-------NGV 148 (191)
T ss_pred cHHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCCC------CChHHHHHHHHHHHHHHHHHH-HH-------cCC
Confidence 35667788888888885 3344568888766654322100 013456677888888887766 32 348
Q ss_pred EEecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHH
Q 046266 84 FTLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFS 163 (174)
Q Consensus 84 ~~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~ 163 (174)
.++|++..+.+.... + +..++++|++||+++||+.||+
T Consensus 149 ~~iD~~~~~~~~~~~----~--------------------------------------~~~~~~~D~~Hpn~~G~~~~a~ 186 (191)
T cd01834 149 AFVDLFTPMKEAFQK----A--------------------------------------GEAVLTVDGVHPNEAGHRALAR 186 (191)
T ss_pred eEEecHHHHHHHHHh----C--------------------------------------CCccccCCCCCCCHHHHHHHHH
Confidence 899999998775543 1 1245789999999999999999
Q ss_pred HHHH
Q 046266 164 ELQS 167 (174)
Q Consensus 164 ~~~~ 167 (174)
.+.+
T Consensus 187 ~~~~ 190 (191)
T cd01834 187 LWLE 190 (191)
T ss_pred HHHh
Confidence 9875
No 11
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.69 E-value=9.3e-08 Score=71.18 Aligned_cols=100 Identities=26% Similarity=0.329 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHH--CCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeE
Q 046266 6 TKSIIGQLAMNLKLILD--LGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVI 83 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~--~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i 83 (174)
.+...+++...|+.+.+ .++ +|+++++||.+ +. ..........||+.+++.. + ...+
T Consensus 67 ~~~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~~----------~~~~~~~~~~~n~~l~~~a-~-------~~~~ 125 (169)
T cd01828 67 DEDIVANYRTILEKLRKHFPNI-KIVVQSILPVG--EL----------KSIPNEQIEELNRQLAQLA-Q-------QEGV 125 (169)
T ss_pred HHHHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--cc----------CcCCHHHHHHHHHHHHHHH-H-------HCCC
Confidence 35677788888888887 555 58889988875 10 1123456788999888876 4 2356
Q ss_pred EEecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHH
Q 046266 84 FTLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFS 163 (174)
Q Consensus 84 ~~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~ 163 (174)
.++|++..+.+ . . + +..+++..|++|||++||+++|+
T Consensus 126 ~~id~~~~~~~---~-----~-------------~----------------------~~~~~~~~DgiHpn~~G~~~~a~ 162 (169)
T cd01828 126 TFLDLWAVFTN---A-----D-------------G----------------------DLKNEFTTDGLHLNAKGYAVWAA 162 (169)
T ss_pred EEEechhhhcC---C-----C-------------C----------------------CcchhhccCccccCHHHHHHHHH
Confidence 78888865421 1 0 0 01245678999999999999999
Q ss_pred HHHHHH
Q 046266 164 ELQSSL 169 (174)
Q Consensus 164 ~~~~~l 169 (174)
.+.+.|
T Consensus 163 ~i~~~~ 168 (169)
T cd01828 163 ALQPYL 168 (169)
T ss_pred HHHHhh
Confidence 999876
No 12
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.68 E-value=2.1e-07 Score=68.37 Aligned_cols=98 Identities=13% Similarity=0.219 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCC-eEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046266 6 TKSIIGQLAMNLKLILDLGVP-KIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIF 84 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~Gar-~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~ 84 (174)
++...+++...|+++.+.+.. .|+++++||....+ .+.....||..+.+.+ ++... ++..+.
T Consensus 59 ~~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~--------------~~~~~~~~n~~l~~~~-~~~~~--~~~~v~ 121 (157)
T cd01833 59 PDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS--------------GNARIAEYNAAIPGVV-ADLRT--AGSPVV 121 (157)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc--------------hhHHHHHHHHHHHHHH-HHHhc--CCCCEE
Confidence 356777888888888776432 46666666653221 1566788999999888 77654 255678
Q ss_pred EecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHH
Q 046266 85 TLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSE 164 (174)
Q Consensus 85 ~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~ 164 (174)
++|+++.+.. +++.+|++|||++||+.||+.
T Consensus 122 ~vd~~~~~~~-------------------------------------------------~~~~~Dg~Hpn~~Gy~~~a~~ 152 (157)
T cd01833 122 LVDMSTGYTT-------------------------------------------------ADDLYDGLHPNDQGYKKMADA 152 (157)
T ss_pred EEecCCCCCC-------------------------------------------------cccccCCCCCchHHHHHHHHH
Confidence 8886643211 246799999999999999999
Q ss_pred HHHHH
Q 046266 165 LQSSL 169 (174)
Q Consensus 165 ~~~~l 169 (174)
+.++|
T Consensus 153 ~~~~~ 157 (157)
T cd01833 153 WYEAL 157 (157)
T ss_pred HHhhC
Confidence 98765
No 13
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.67 E-value=1.7e-07 Score=71.48 Aligned_cols=111 Identities=15% Similarity=0.132 Sum_probs=70.9
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046266 5 LTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIF 84 (174)
Q Consensus 5 ~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~ 84 (174)
+.....+++...|+++.+.|++ +++++.||+.- ...+.....+|..+++.+ ++ ..+.
T Consensus 89 ~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~--------------~~~~~~~~~~~~~~~~~a-~~-------~~~~ 145 (200)
T cd01829 89 WEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS--------------PKLSADMVYLNSLYREEV-AK-------AGGE 145 (200)
T ss_pred HHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC--------------hhHhHHHHHHHHHHHHHH-HH-------cCCE
Confidence 4556677788888887777776 88888888741 112345567787776665 32 2378
Q ss_pred EecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHH
Q 046266 85 TLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSE 164 (174)
Q Consensus 85 ~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~ 164 (174)
++|++..|.+ . . .|+...+ .........++..|++|||++||++||+.
T Consensus 146 ~id~~~~~~~---~-----~---------~~~~~~~---------------~~~~~~~~~~~~~DgvH~~~~G~~~~a~~ 193 (200)
T cd01829 146 FVDVWDGFVD---E-----N---------GRFTYSG---------------TDVNGKKVRLRTNDGIHFTAAGGRKLAFY 193 (200)
T ss_pred EEEhhHhhcC---C-----C---------CCeeeec---------------cCCCCcEEEeecCCCceECHHHHHHHHHH
Confidence 9999876532 1 1 1220000 00111122455679999999999999999
Q ss_pred HHHHHH
Q 046266 165 LQSSLR 170 (174)
Q Consensus 165 ~~~~l~ 170 (174)
+.+.|+
T Consensus 194 i~~~l~ 199 (200)
T cd01829 194 VEKLIR 199 (200)
T ss_pred HHHHhh
Confidence 999875
No 14
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=98.65 E-value=3.9e-07 Score=70.67 Aligned_cols=105 Identities=20% Similarity=0.235 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHCC-CCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046266 6 TKSIIGQLAMNLKLILDLG-VPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIF 84 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~G-ar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~ 84 (174)
.+.+.+++...|+++.+.. ..+|+++++||.+..| ..+......+|+.+++.+ . ....+.
T Consensus 108 ~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~------------~~~~~~~~~~n~~l~~~~-~------~~~~v~ 168 (214)
T cd01820 108 AEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP------------NPLRERNAQVNRLLAVRY-D------GLPNVT 168 (214)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc------------hhHHHHHHHHHHHHHHHh-c------CCCCEE
Confidence 5667788888888888764 3468889988865421 123344567777776655 2 123688
Q ss_pred EecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHH
Q 046266 85 TLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSE 164 (174)
Q Consensus 85 ~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~ 164 (174)
++|++..|.+ . . +. ....++.|++||+++||++||+.
T Consensus 169 ~vd~~~~~~~---~----~--------------g~----------------------~~~~~~~DGlHpn~~Gy~~~a~~ 205 (214)
T cd01820 169 FLDIDKGFVQ---S----D--------------GT----------------------ISHHDMPDYLHLTAAGYRKWADA 205 (214)
T ss_pred EEeCchhhcc---c----C--------------CC----------------------cCHhhcCCCCCCCHHHHHHHHHH
Confidence 9998876541 1 0 10 01224589999999999999999
Q ss_pred HHHHHHHH
Q 046266 165 LQSSLRII 172 (174)
Q Consensus 165 ~~~~l~~~ 172 (174)
+.+.|+++
T Consensus 206 l~~~l~~~ 213 (214)
T cd01820 206 LHPTLARL 213 (214)
T ss_pred HHHHHHhh
Confidence 99999875
No 15
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.62 E-value=1.9e-07 Score=70.60 Aligned_cols=111 Identities=14% Similarity=0.129 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHH--CCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeE
Q 046266 6 TKSIIGQLAMNLKLILD--LGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVI 83 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~--~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i 83 (174)
.....+++...|+++.+ .|+ ++++++.||++..................+.....||+.+++.. ++ ..+
T Consensus 87 ~~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-~~-------~~~ 157 (199)
T cd01838 87 LDEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLEDGGSQPGRTNELLKQYAEACVEVA-EE-------LGV 157 (199)
T ss_pred HHHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhccccCCccccHHHHHHHHHHHHHHH-HH-------hCC
Confidence 45566777777887776 565 58888888875332110000000123445677788888877766 32 237
Q ss_pred EEecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHH
Q 046266 84 FTLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFS 163 (174)
Q Consensus 84 ~~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~ 163 (174)
.++|+++.+.. . +. ....++.|++||+++||++||+
T Consensus 158 ~~iD~~~~~~~---~----~~-------------------------------------~~~~~~~Dg~Hpn~~G~~~~a~ 193 (199)
T cd01838 158 PVIDLWTAMQE---E----AG-------------------------------------WLESLLTDGLHFSSKGYELLFE 193 (199)
T ss_pred cEEEHHHHHHh---c----cC-------------------------------------chhhhcCCCCCcCHhHHHHHHH
Confidence 78999876653 2 10 0123557999999999999999
Q ss_pred HHHHHH
Q 046266 164 ELQSSL 169 (174)
Q Consensus 164 ~~~~~l 169 (174)
.+.+.|
T Consensus 194 ~l~~~~ 199 (199)
T cd01838 194 EIVKVI 199 (199)
T ss_pred HHHhhC
Confidence 998764
No 16
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.59 E-value=4e-07 Score=68.54 Aligned_cols=106 Identities=19% Similarity=0.248 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEE
Q 046266 6 TKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFT 85 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~ 85 (174)
.....+++...|+.+.+.|++ ++++..||....+... .....+.....||..+++.. ++ ..+.+
T Consensus 78 ~~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~-------~~~~~~~~~~~~n~~~~~~a-~~-------~~v~~ 141 (183)
T cd04501 78 LEMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP-------QWLRPANKLKSLNRWLKDYA-RE-------NGLLF 141 (183)
T ss_pred HHHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch-------hhcchHHHHHHHHHHHHHHH-HH-------cCCCE
Confidence 456778888888888888885 6667777765433211 11234566778888887766 42 25789
Q ss_pred ecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHHH
Q 046266 86 LDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSEL 165 (174)
Q Consensus 86 ~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~~ 165 (174)
+|+++.+.+.... . ....+..|++||+++||+++|+.+
T Consensus 142 vd~~~~~~~~~~~-------------------~-----------------------~~~~~~~DgvHp~~~Gy~~~a~~i 179 (183)
T cd04501 142 LDFYSPLLDERNV-------------------G-----------------------LKPGLLTDGLHPSREGYRVMAPLA 179 (183)
T ss_pred Eechhhhhccccc-------------------c-----------------------ccccccCCCCCCCHHHHHHHHHHH
Confidence 9999875542110 0 123456799999999999999999
Q ss_pred HHHH
Q 046266 166 QSSL 169 (174)
Q Consensus 166 ~~~l 169 (174)
.++|
T Consensus 180 ~~~~ 183 (183)
T cd04501 180 EKAL 183 (183)
T ss_pred HHhC
Confidence 8865
No 17
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.57 E-value=4.5e-07 Score=69.84 Aligned_cols=102 Identities=16% Similarity=0.061 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHCC------CCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 046266 6 TKSIIGQLAMNLKLILDLG------VPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESK 79 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~G------ar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~ 79 (174)
.+...+++.+.|+.+.+.+ ..++++++.||+...+... ..+....+..+..||+.+++.. ++.
T Consensus 100 ~~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~a-~~~----- 168 (208)
T cd01839 100 AAEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGSL-----AGKFAGAEEKSKGLADAYRALA-EEL----- 168 (208)
T ss_pred HHHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccch-----hhhhccHHHHHHHHHHHHHHHH-HHh-----
Confidence 3566777777788777653 5679999998872222111 0223344667788888887766 432
Q ss_pred CCeEEEecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHH
Q 046266 80 RPVIFTLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWH 159 (174)
Q Consensus 80 ~~~i~~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~ 159 (174)
.+.++|+++++ .. +..|++|||++||+
T Consensus 169 --~~~~iD~~~~~----~~-----------------------------------------------~~~DGvH~~~~G~~ 195 (208)
T cd01839 169 --GCHFFDAGSVG----ST-----------------------------------------------SPVDGVHLDADQHA 195 (208)
T ss_pred --CCCEEcHHHHh----cc-----------------------------------------------CCCCccCcCHHHHH
Confidence 35677764321 10 23799999999999
Q ss_pred HHHHHHHHHHHH
Q 046266 160 AVFSELQSSLRI 171 (174)
Q Consensus 160 ~iA~~~~~~l~~ 171 (174)
+||+.+.+.|++
T Consensus 196 ~~a~~l~~~i~~ 207 (208)
T cd01839 196 ALGQALASVIRA 207 (208)
T ss_pred HHHHHHHHHHhh
Confidence 999999998875
No 18
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.57 E-value=8.3e-07 Score=64.62 Aligned_cols=100 Identities=17% Similarity=0.108 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046266 6 TKSIIGQLAMNLKLILD-LGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIF 84 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~-~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~ 84 (174)
.....+.+...++.+.+ ....+|++++.|+....|. ........+|..+++.. +..... ..+.
T Consensus 86 ~~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~~~~~---~~~~ 149 (187)
T cd00229 86 IDEFKANLEELLDALRERAPGAKVILITPPPPPPREG------------LLGRALPRYNEAIKAVA-AENPAP---SGVD 149 (187)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch------------hhHHHHHHHHHHHHHHH-HHcCCC---cceE
Confidence 45667777788888775 4566799999999887664 23345677788887776 544321 3466
Q ss_pred EecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHH
Q 046266 85 TLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSE 164 (174)
Q Consensus 85 ~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~ 164 (174)
++|++..+... +..+++||++|||++||+++|+.
T Consensus 150 ~~d~~~~~~~~----------------------------------------------~~~~~~~Dg~H~~~~G~~~~a~~ 183 (187)
T cd00229 150 LVDLAALLGDE----------------------------------------------DKSLYSPDGIHPNPAGHKLIAEA 183 (187)
T ss_pred EEEhhhhhCCC----------------------------------------------ccccccCCCCCCchhhHHHHHHH
Confidence 77766433221 23578899999999999999998
Q ss_pred HHH
Q 046266 165 LQS 167 (174)
Q Consensus 165 ~~~ 167 (174)
+.+
T Consensus 184 i~~ 186 (187)
T cd00229 184 LAS 186 (187)
T ss_pred Hhc
Confidence 865
No 19
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.44 E-value=7e-07 Score=68.24 Aligned_cols=110 Identities=12% Similarity=-0.041 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046266 5 LTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIF 84 (174)
Q Consensus 5 ~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~ 84 (174)
-++...+++.+.|+++.+.|++ +++++.||... +.. . ...+.....||+.+++.. ++. .+.
T Consensus 88 ~~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~---~~~------~-~~~~~~~~~~~~~~~~~a-~~~-------~~~ 148 (198)
T cd01821 88 PYTTYKEYLRRYIAEARAKGAT-PILVTPVTRRT---FDE------G-GKVEDTLGDYPAAMRELA-AEE-------GVP 148 (198)
T ss_pred cHHHHHHHHHHHHHHHHHCCCe-EEEECCccccc---cCC------C-CcccccchhHHHHHHHHH-HHh-------CCC
Confidence 3567888899999999999986 55666555321 110 0 023344577888877766 432 477
Q ss_pred EecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCC-CceecCCCChhHHHHHHHHH
Q 046266 85 TLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPK-LSFFWDNIHPSQNGWHAVFS 163 (174)
Q Consensus 85 ~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~-~ylfwD~~HPT~~~h~~iA~ 163 (174)
++|++..+.+..+. -.. . + ..+. .++..|++||+++||++||+
T Consensus 149 ~vD~~~~~~~~~~~----~g~---~--------~---------------------~~~~~~~~~~DgvHp~~~G~~~~a~ 192 (198)
T cd01821 149 LIDLNAASRALYEA----IGP---E--------K---------------------SKKYFPEGPGDNTHFSEKGADVVAR 192 (198)
T ss_pred EEecHHHHHHHHHH----hCh---H--------h---------------------HHhhCcCCCCCCCCCCHHHHHHHHH
Confidence 99999999887664 100 0 0 0000 24668999999999999999
Q ss_pred HHHHHH
Q 046266 164 ELQSSL 169 (174)
Q Consensus 164 ~~~~~l 169 (174)
.|.+.|
T Consensus 193 ~i~~~~ 198 (198)
T cd01821 193 LVAEEL 198 (198)
T ss_pred HHHhhC
Confidence 998765
No 20
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.43 E-value=2.4e-06 Score=63.68 Aligned_cols=102 Identities=20% Similarity=0.243 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHHCCC-CeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046266 6 TKSIIGQLAMNLKLILDLGV-PKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIF 84 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~Ga-r~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~ 84 (174)
.+...+++.+.|+++.+.+. .+++++.+||. | .. ...+.....+|+.+++.. . + ...+.
T Consensus 69 ~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~--~~--------~~~~~~~~~~n~~~~~~a-~----~--~~~v~ 128 (171)
T cd04502 69 PEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---P--AR--------WALRPKIRRFNALLKELA-E----T--RPNLT 128 (171)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---C--cc--------hhhHHHHHHHHHHHHHHH-h----c--CCCeE
Confidence 56678888999999887753 35777776542 1 00 112344567887776665 3 1 23578
Q ss_pred EecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHH
Q 046266 85 TLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSE 164 (174)
Q Consensus 85 ~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~ 164 (174)
++|++..+.+.-.+ ...+++..|++|||++||+++|+.
T Consensus 129 ~vD~~~~~~~~~~~------------------------------------------~~~~~~~~DGlH~n~~Gy~~~a~~ 166 (171)
T cd04502 129 YIDVASPMLDADGK------------------------------------------PRAELFQEDGLHLNDAGYALWRKV 166 (171)
T ss_pred EEECcHHHhCCCCC------------------------------------------cChhhcCCCCCCCCHHHHHHHHHH
Confidence 99998765431100 012456789999999999999999
Q ss_pred HHHHH
Q 046266 165 LQSSL 169 (174)
Q Consensus 165 ~~~~l 169 (174)
+.+.|
T Consensus 167 l~~~~ 171 (171)
T cd04502 167 IKPAL 171 (171)
T ss_pred HHhhC
Confidence 98764
No 21
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=98.39 E-value=9.6e-07 Score=64.76 Aligned_cols=98 Identities=20% Similarity=0.243 Sum_probs=68.7
Q ss_pred chHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeE
Q 046266 4 GLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVI 83 (174)
Q Consensus 4 ~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i 83 (174)
...+...+++...|+.+...| +++++++||..-.+... +..........+|+.+++.. ++ ..+
T Consensus 82 ~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~a-~~-------~~~ 144 (179)
T PF13472_consen 82 TSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRDP-------KQDYLNRRIDRYNQAIRELA-KK-------YGV 144 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTTT-------HTTCHHHHHHHHHHHHHHHH-HH-------CTE
T ss_pred ccHHHHHHHHHHHHHhhcccC--cEEEecCCCcccccccc-------cchhhhhhHHHHHHHHHHHH-HH-------cCC
Confidence 356778899999999998888 89999998876433221 12345667788888887766 32 268
Q ss_pred EEecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHH
Q 046266 84 FTLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAV 161 (174)
Q Consensus 84 ~~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~i 161 (174)
.++|++..+.+ . . . ....+++.|++|||++||++|
T Consensus 145 ~~id~~~~~~~---~-----~-------------~----------------------~~~~~~~~D~~Hp~~~G~~~~ 179 (179)
T PF13472_consen 145 PFIDLFDAFDD---H-----D-------------G----------------------WFPKYYFSDGVHPNPAGHQLI 179 (179)
T ss_dssp EEEEHHHHHBT---T-----T-------------S----------------------CBHTCTBTTSSSBBHHHHHHH
T ss_pred EEEECHHHHcc---c-----c-------------c----------------------cchhhcCCCCCCcCHHHhCcC
Confidence 89999887442 1 1 0 012467799999999999986
No 22
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.35 E-value=1.5e-06 Score=65.36 Aligned_cols=112 Identities=13% Similarity=-0.071 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHHC-CCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046266 6 TKSIIGQLAMNLKLILDL-GVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIF 84 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~-Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~ 84 (174)
.+...+++...|+++.+. ...+|++++.||....+.. +....+.....+|..+++.. + + ..+.
T Consensus 76 ~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a-~----~---~~v~ 139 (189)
T cd01825 76 ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGA--------GRWRTPPGLDAVIAAQRRVA-K----E---EGIA 139 (189)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCC--------CCcccCCcHHHHHHHHHHHH-H----H---cCCe
Confidence 456778888888888774 4556888888776433210 01111233566676666555 2 2 2378
Q ss_pred EecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHH
Q 046266 85 TLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSE 164 (174)
Q Consensus 85 ~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~ 164 (174)
++|+++.+.+.... .......++..|++|||++||+.||+.
T Consensus 140 ~vd~~~~~~~~~~~---------------------------------------~~~~~~~~~~~Dg~Hp~~~G~~~~a~~ 180 (189)
T cd01825 140 FWDLYAAMGGEGGI---------------------------------------WQWAEPGLARKDYVHLTPRGYERLANL 180 (189)
T ss_pred EEeHHHHhCCcchh---------------------------------------hHhhcccccCCCcccCCcchHHHHHHH
Confidence 89998765331000 000012356689999999999999999
Q ss_pred HHHHHHHH
Q 046266 165 LQSSLRII 172 (174)
Q Consensus 165 ~~~~l~~~ 172 (174)
+.+.|.+.
T Consensus 181 i~~~i~~~ 188 (189)
T cd01825 181 LYEALLKA 188 (189)
T ss_pred HHHHHHhh
Confidence 99998763
No 23
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.33 E-value=3.8e-06 Score=63.11 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=66.2
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCeEEEecCCCC-CcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeE
Q 046266 5 LTKSIIGQLAMNLKLILDLGVPKIAVTSMEPM-GCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVI 83 (174)
Q Consensus 5 ~v~~~v~~i~~~v~~L~~~Gar~~~v~nlppl-g~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i 83 (174)
......+++...|+++...+++ ++++++||. +..|. ..........+|+.|++.. ++ ..+
T Consensus 86 ~~~~~~~~~~~~i~~i~~~~~~-vil~~~~~~~~~~~~----------~~~~~~~~~~~n~~l~~~a-~~-------~~v 146 (185)
T cd01832 86 DPDTYRADLEEAVRRLRAAGAR-VVVFTIPDPAVLEPF----------RRRVRARLAAYNAVIRAVA-AR-------YGA 146 (185)
T ss_pred CHHHHHHHHHHHHHHHHhCCCE-EEEecCCCccccchh----------HHHHHHHHHHHHHHHHHHH-HH-------cCC
Confidence 3456778888889988877774 888899888 32221 1223445778888887766 32 247
Q ss_pred EEecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHH
Q 046266 84 FTLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFS 163 (174)
Q Consensus 84 ~~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~ 163 (174)
.++|++..+. . . ...++.-|++||+++||++||+
T Consensus 147 ~~vd~~~~~~----~-------------------~-----------------------~~~~~~~DgiHpn~~G~~~~A~ 180 (185)
T cd01832 147 VHVDLWEHPE----F-------------------A-----------------------DPRLWASDRLHPSAAGHARLAA 180 (185)
T ss_pred EEEecccCcc----c-------------------C-----------------------CccccccCCCCCChhHHHHHHH
Confidence 7888764321 0 0 0123345999999999999999
Q ss_pred HHHH
Q 046266 164 ELQS 167 (174)
Q Consensus 164 ~~~~ 167 (174)
.+.+
T Consensus 181 ~i~~ 184 (185)
T cd01832 181 LVLA 184 (185)
T ss_pred HHhh
Confidence 9875
No 24
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.31 E-value=4.9e-06 Score=64.01 Aligned_cols=102 Identities=13% Similarity=0.129 Sum_probs=62.3
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046266 5 LTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIF 84 (174)
Q Consensus 5 ~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~ 84 (174)
.++...+++...|+++.+.|+ +++++++||..-.|.. ... ....++.+.+.+ ++. .... .
T Consensus 100 ~~~~~~~~l~~ii~~~~~~~~-~vil~t~~P~~~~~~~---------~~~----~~~~~~~~n~~~-~~~----~~~~-~ 159 (204)
T cd01830 100 TAEELIAGYRQLIRRAHARGI-KVIGATITPFEGSGYY---------TPA----REATRQAVNEWI-RTS----GAFD-A 159 (204)
T ss_pred CHHHHHHHHHHHHHHHHHCCC-eEEEecCCCCCCCCCC---------CHH----HHHHHHHHHHHH-Hcc----CCCC-e
Confidence 466788899999999999987 5788888886432211 111 122334444444 332 1112 3
Q ss_pred EecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHH
Q 046266 85 TLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSE 164 (174)
Q Consensus 85 ~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~ 164 (174)
++|+++.|.+.... . . -...|+.+|++||+++||++||+.
T Consensus 160 ~vD~~~~~~~~~~~-----~-------------~----------------------~~~~~~~~DGvHpn~~Gy~~~A~~ 199 (204)
T cd01830 160 VVDFDAALRDPADP-----S-------------R----------------------LRPAYDSGDHLHPNDAGYQAMADA 199 (204)
T ss_pred eeEhHHhhcCCCCc-----h-------------h----------------------cccccCCCCCCCCCHHHHHHHHHh
Confidence 57888665431110 0 0 012466789999999999999998
Q ss_pred HH
Q 046266 165 LQ 166 (174)
Q Consensus 165 ~~ 166 (174)
+.
T Consensus 200 i~ 201 (204)
T cd01830 200 VD 201 (204)
T ss_pred cC
Confidence 74
No 25
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=98.31 E-value=6.5e-06 Score=63.02 Aligned_cols=100 Identities=14% Similarity=0.181 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHCCCC-eEEEecCC-CCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046266 7 KSIIGQLAMNLKLILDLGVP-KIAVTSME-PMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIF 84 (174)
Q Consensus 7 ~~~v~~i~~~v~~L~~~Gar-~~~v~nlp-plg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~ 84 (174)
.....++.+.|+++.+.+.+ +|++++++ |... .. .-...++..+..||..+++.+ .+ ..++.
T Consensus 102 ~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~p~~~-----~~----~~~~~~~~~~~~~n~~~~~~a-~~------~~~v~ 165 (204)
T cd04506 102 ETYQNNLKKIFKEIRKLNPDAPIFLVGLYNPFYV-----YF----PNITEINDIVNDWNEASQKLA-SQ------YKNAY 165 (204)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEecCCcccc-----cc----chHHHHHHHHHHHHHHHHHHH-Hh------CCCeE
Confidence 45667888888888887543 57777763 3211 11 012345678888998877766 31 12488
Q ss_pred EecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHH
Q 046266 85 TLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSE 164 (174)
Q Consensus 85 ~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~ 164 (174)
++|+++.+.. . . +..++..|++||+++||++||+.
T Consensus 166 ~vd~~~~~~~---~-----~-------------------------------------~~~~~~~Dg~Hpn~~G~~~~a~~ 200 (204)
T cd04506 166 FVPIFDLFSD---G-----Q-------------------------------------NKYLLTSDHFHPNDKGYQLIADR 200 (204)
T ss_pred EEehHHhhcC---C-----c-------------------------------------ccccccccCcCCCHHHHHHHHHH
Confidence 9998875432 1 0 11345679999999999999999
Q ss_pred HHH
Q 046266 165 LQS 167 (174)
Q Consensus 165 ~~~ 167 (174)
+.+
T Consensus 201 l~~ 203 (204)
T cd04506 201 VFK 203 (204)
T ss_pred HHh
Confidence 875
No 26
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=98.29 E-value=5.7e-06 Score=63.24 Aligned_cols=29 Identities=17% Similarity=0.188 Sum_probs=25.2
Q ss_pred CceecCCCChhHHHHHHHHHHHHHHHHHH
Q 046266 144 LSFFWDNIHPSQNGWHAVFSELQSSLRII 172 (174)
Q Consensus 144 ~ylfwD~~HPT~~~h~~iA~~~~~~l~~~ 172 (174)
+++..|++||+++||+.||+.+.+.|+..
T Consensus 158 ~~~~~DGiHpn~~Gy~~~A~~i~~~l~~~ 186 (191)
T PRK10528 158 QWMQDDGIHPNRDAQPFIADWMAKQLQPL 186 (191)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 35667999999999999999999998764
No 27
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=98.15 E-value=1.5e-05 Score=59.21 Aligned_cols=26 Identities=23% Similarity=0.345 Sum_probs=22.9
Q ss_pred ceecCCCChhHHHHHHHHHHHHHHHH
Q 046266 145 SFFWDNIHPSQNGWHAVFSELQSSLR 170 (174)
Q Consensus 145 ylfwD~~HPT~~~h~~iA~~~~~~l~ 170 (174)
++.-|++|||++||++||+.+.+.|+
T Consensus 152 ~~~~DgvHpn~~G~~~~a~~i~~~i~ 177 (177)
T cd01822 152 LMQSDGIHPNAEGQPIIAENVWPALE 177 (177)
T ss_pred hhCCCCCCcCHHHHHHHHHHHHHhhC
Confidence 45679999999999999999998873
No 28
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=98.15 E-value=3.5e-05 Score=62.85 Aligned_cols=124 Identities=15% Similarity=0.091 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCC-eEEEecCCCCCccccccc------ccCcCcch----------hHHHHHHHHHHHHHHH
Q 046266 6 TKSIIGQLAMNLKLILDLGVP-KIAVTSMEPMGCLPQLSA------VSSYENCS----------ESLNSASKFHNQLLEQ 68 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~Gar-~~~v~nlpplg~~P~~~~------~~~~~~~~----------~~~~~~~~~~N~~L~~ 68 (174)
.....+++.+.++.|.+..-| .++++++|++..++.... ..-...|. +.+......|++.+++
T Consensus 144 ~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~~~~~~~C~c~~~~~~~~~~~~~~~~~~y~~~~~e 223 (288)
T cd01824 144 PQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCETLLAPECPCLLGPTENSYQDLKKFYKEYQNEVEE 223 (288)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCccccccCCCcCCCcCCCCcchHHHHHHHHHHHHHHHHH
Confidence 567778899999999888755 467778888765544321 11111232 3556777888888777
Q ss_pred HHHHHHhhhCCCCeEEEecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceec
Q 046266 69 EILQNFNNESKRPVIFTLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFW 148 (174)
Q Consensus 69 ~l~~~l~~~~~~~~i~~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfw 148 (174)
.+ +.-.-+..+..+++ ..+|.+.+.. +. .... -.+++-|
T Consensus 224 ia-~~~~~~~~~f~vv~---qPf~~~~~~~----~~--------------------------------~~g~-d~~~~~~ 262 (288)
T cd01824 224 IV-ESGEFDREDFAVVV---QPFFEDTSLP----PL--------------------------------PDGP-DLSFFSP 262 (288)
T ss_pred HH-hcccccccCccEEe---eCchhccccc----cc--------------------------------cCCC-cchhcCC
Confidence 66 43221123333443 2233332211 00 0000 1267889
Q ss_pred CCCChhHHHHHHHHHHHHHHHH
Q 046266 149 DNIHPSQNGWHAVFSELQSSLR 170 (174)
Q Consensus 149 D~~HPT~~~h~~iA~~~~~~l~ 170 (174)
|.+||+++||.++|+.++..|-
T Consensus 263 D~~Hps~~G~~~ia~~lwn~m~ 284 (288)
T cd01824 263 DCFHFSQRGHAIAANALWNNLL 284 (288)
T ss_pred CCCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999887764
No 29
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.12 E-value=3.1e-05 Score=61.44 Aligned_cols=125 Identities=12% Similarity=0.055 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHHC-CCCeEEEecCCCCCcc-ccccc------ccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 046266 6 TKSIIGQLAMNLKLILDL-GVPKIAVTSMEPMGCL-PQLSA------VSSYENCSESLNSASKFHNQLLEQEILQNFNNE 77 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~-Gar~~~v~nlpplg~~-P~~~~------~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~ 77 (174)
.+...+++...|++|.+. .--+|++++.|++--. ..... ..-.......+++....+|..+++.. ++.
T Consensus 126 ~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~a-~~~--- 201 (259)
T cd01823 126 LDEVGARLKAVLDRIRERAPNARVVVVGYPRLFPPDGGDCDKSCSPGTPLTPADRPELNQLVDKLNALIRRAA-ADA--- 201 (259)
T ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEecccccccCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHh---
Confidence 456677788888888754 3346999998876311 00000 00000233456677788888777766 433
Q ss_pred CCCCeEEEecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHH
Q 046266 78 SKRPVIFTLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNG 157 (174)
Q Consensus 78 ~~~~~i~~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~ 157 (174)
.+.++.|+|++..|..- ..|..+ . ... .-.+....+.-|++|||++|
T Consensus 202 -~~~~v~fvD~~~~f~~~-----------------~~~~~~-~---~~~-----------~~~~~~~~~~~d~~HPn~~G 248 (259)
T cd01823 202 -GDYKVRFVDTDAPFAGH-----------------RACSPD-P---WSR-----------SVLDLLPTRQGKPFHPNAAG 248 (259)
T ss_pred -CCceEEEEECCCCcCCC-----------------ccccCC-C---ccc-----------cccCCCCCCCccCCCCCHHH
Confidence 33568899998755431 122211 0 000 00011234567999999999
Q ss_pred HHHHHHHHHH
Q 046266 158 WHAVFSELQS 167 (174)
Q Consensus 158 h~~iA~~~~~ 167 (174)
|+.||+.+.+
T Consensus 249 ~~~~A~~i~~ 258 (259)
T cd01823 249 HRAIADLIVD 258 (259)
T ss_pred HHHHHHHHhh
Confidence 9999999875
No 30
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.12 E-value=5e-05 Score=57.03 Aligned_cols=102 Identities=13% Similarity=0.083 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHCCC-CeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEe
Q 046266 8 SIIGQLAMNLKLILDLGV-PKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTL 86 (174)
Q Consensus 8 ~~v~~i~~~v~~L~~~Ga-r~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~ 86 (174)
...+++...|++|.+.+. .+|++++.||... ..... ......+.....+| +.+ +.+... ...++.++
T Consensus 75 ~~~~~~~~~i~~i~~~~p~~~iil~~~~~~~~---~~~~~---~~~~~~~~~~~~~~----~~~-~~~~~~-~~~~v~~i 142 (177)
T cd01844 75 MVRERLGPLVKGLRETHPDTPILLVSPRYCPD---AELTP---GRGKLTLAVRRALR----EAF-EKLRAD-GVPNLYYL 142 (177)
T ss_pred HHHHHHHHHHHHHHHHCcCCCEEEEecCCCCc---cccCc---chhHHHHHHHHHHH----HHH-HHHHhc-CCCCEEEe
Confidence 567889999999988764 4688888776532 11111 11223333344444 333 333322 23468888
Q ss_pred cchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHHHH
Q 046266 87 DLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSELQ 166 (174)
Q Consensus 87 D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~~~ 166 (174)
|.++++ .. . .-++.|++|||++||++||+.+.
T Consensus 143 d~~~~~----~~-------------------~-------------------------~~~~~DglHpn~~Gy~~~a~~l~ 174 (177)
T cd01844 143 DGEELL----GP-------------------D-------------------------GEALVDGIHPTDLGHMRYADRFE 174 (177)
T ss_pred cchhhc----CC-------------------C-------------------------CCCCCCCCCCCHHHHHHHHHHHh
Confidence 865432 11 0 11456999999999999999988
Q ss_pred HHH
Q 046266 167 SSL 169 (174)
Q Consensus 167 ~~l 169 (174)
+.|
T Consensus 175 ~~~ 177 (177)
T cd01844 175 PVL 177 (177)
T ss_pred hcC
Confidence 754
No 31
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.06 E-value=3.1e-05 Score=58.33 Aligned_cols=100 Identities=15% Similarity=0.118 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHCCC-CeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEE
Q 046266 6 TKSIIGQLAMNLKLILDLGV-PKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIF 84 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~Ga-r~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~ 84 (174)
.+....++...|+++.+.+. .++++++.||...... .. ...+.....+|+.+++.. ++ ..+.
T Consensus 88 ~~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~--------~~-~~~~~~~~~~~~~~~~~a-~~-------~~~~ 150 (188)
T cd01827 88 KDDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDG--------GF-INDNIIKKEIQPMIDKIA-KK-------LNLK 150 (188)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCC--------Cc-cchHHHHHHHHHHHHHHH-HH-------cCCc
Confidence 34566788888888877654 4688888776543211 01 112334456676666555 32 2456
Q ss_pred EecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHH
Q 046266 85 TLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSE 164 (174)
Q Consensus 85 ~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~ 164 (174)
++|+++.+. .. + .++-|++||+++||++||+.
T Consensus 151 ~vD~~~~~~---~~-------------------------------------------~--~~~~Dg~Hpn~~G~~~~A~~ 182 (188)
T cd01827 151 LIDLHTPLK---GK-------------------------------------------P--ELVPDWVHPNEKGAYILAKV 182 (188)
T ss_pred EEEcccccc---CC-------------------------------------------c--cccCCCCCcCHHHHHHHHHH
Confidence 778764321 01 0 23469999999999999999
Q ss_pred HHHHHH
Q 046266 165 LQSSLR 170 (174)
Q Consensus 165 ~~~~l~ 170 (174)
+.+.|+
T Consensus 183 i~~~i~ 188 (188)
T cd01827 183 VYKAIT 188 (188)
T ss_pred HHHHhC
Confidence 998873
No 32
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=98.01 E-value=3.4e-05 Score=56.63 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=22.4
Q ss_pred CceecCCCChhHHHHHHHHHHHHHHH
Q 046266 144 LSFFWDNIHPSQNGWHAVFSELQSSL 169 (174)
Q Consensus 144 ~ylfwD~~HPT~~~h~~iA~~~~~~l 169 (174)
+++..|++||+++||+++|+.+.+.|
T Consensus 125 ~~~~~DgiHpn~~G~~~~a~~i~~ai 150 (150)
T cd01840 125 DWFYGDGVHPNPAGAKLYAALIAKAI 150 (150)
T ss_pred hhhcCCCCCCChhhHHHHHHHHHHhC
Confidence 35567999999999999999998764
No 33
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.01 E-value=2.4e-05 Score=59.33 Aligned_cols=96 Identities=14% Similarity=0.032 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEec
Q 046266 8 SIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLD 87 (174)
Q Consensus 8 ~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D 87 (174)
...+++...++++ ..++ +++++++||+.-.+ ....+.....+|+.+++.. ++ ..+.++|
T Consensus 96 ~~~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~-----------~~~~~~~~~~~n~~~~~~a-~~-------~~~~~vd 154 (193)
T cd01835 96 AFLFGLNQLLEEA-KRLV-PVLVVGPTPVDEAK-----------MPYSNRRIARLETAFAEVC-LR-------RDVPFLD 154 (193)
T ss_pred HHHHHHHHHHHHH-hcCC-cEEEEeCCCccccc-----------cchhhHHHHHHHHHHHHHH-HH-------cCCCeEe
Confidence 3444444444443 3354 48888888764211 0123456777888887766 42 2467889
Q ss_pred chHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHHHHH
Q 046266 88 LYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSELQS 167 (174)
Q Consensus 88 ~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~~~~ 167 (174)
++..+.+. . . . ...++..|++|||++||++||+.+..
T Consensus 155 ~~~~~~~~--~-----~-------------~-----------------------~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 155 TFTPLLNH--P-----Q-------------W-----------------------RRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred CccchhcC--c-----H-------------H-----------------------HHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 88765441 1 0 0 01233369999999999999998753
No 34
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=97.93 E-value=9.2e-05 Score=55.14 Aligned_cols=25 Identities=16% Similarity=0.272 Sum_probs=22.4
Q ss_pred eecCCCChhHHHHHHHHHHHHHHHH
Q 046266 146 FFWDNIHPSQNGWHAVFSELQSSLR 170 (174)
Q Consensus 146 lfwD~~HPT~~~h~~iA~~~~~~l~ 170 (174)
++.|++||+++||+.||+.+.+.|+
T Consensus 145 ~~~DgiHPn~~G~~~iA~~l~~~i~ 169 (169)
T cd01831 145 DIGCDWHPTVAGHQKIAKHLLPAIK 169 (169)
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 3689999999999999999998874
No 35
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=97.72 E-value=0.0011 Score=54.35 Aligned_cols=32 Identities=6% Similarity=-0.020 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHHHHHHHCCCC--eEEEecCCCC
Q 046266 5 LTKSIIGQLAMNLKLILDLGVP--KIAVTSMEPM 36 (174)
Q Consensus 5 ~v~~~v~~i~~~v~~L~~~Gar--~~~v~nlppl 36 (174)
.+..--+++.+.|+.|.+...+ +++++++|++
T Consensus 147 p~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~ 180 (305)
T cd01826 147 TPEEFYENVMEALKYLDTKLPNGSHVILVGLVDG 180 (305)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCCCEEEEEeccch
Confidence 4566778899999999998755 8999999994
No 36
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=97.66 E-value=0.00015 Score=56.38 Aligned_cols=115 Identities=17% Similarity=0.146 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHCC-CCeEEEecCCCCCcccccccc-cCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeE
Q 046266 6 TKSIIGQLAMNLKLILDLG-VPKIAVTSMEPMGCLPQLSAV-SSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVI 83 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~G-ar~~~v~nlpplg~~P~~~~~-~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i 83 (174)
++.-++|+.+.++-|.+.- -.+|++++-||+...-..... .+...-..+.|+....|++.+.+.. +++ ++
T Consensus 95 l~Ey~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~e~~~~~~~RtNe~~~~Ya~ac~~la-~e~-------~l 166 (245)
T KOG3035|consen 95 LEEYKDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQEPYVLGPERTNETVGTYAKACANLA-QEI-------GL 166 (245)
T ss_pred HHHHHHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhccchhccchhhhhHHHHHHHHHHHHH-HHh-------CC
Confidence 4567888888888887766 346888888888754222221 1111233468999999999998887 543 56
Q ss_pred EEecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHH
Q 046266 84 FTLDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFS 163 (174)
Q Consensus 84 ~~~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~ 163 (174)
..+|.++.+.+.-+ -.+-.|||++|.|..|++++++
T Consensus 167 ~~vdlws~~Q~~~d--------------------------------------------w~~~~ltDGLHlS~~G~~ivf~ 202 (245)
T KOG3035|consen 167 YVVDLWSKMQESDD--------------------------------------------WQTSCLTDGLHLSPKGNKIVFD 202 (245)
T ss_pred eeeeHHhhhhhccc--------------------------------------------HHHHHhccceeeccccchhhHH
Confidence 67787665544211 1123589999999999999999
Q ss_pred HHHHHHHHH
Q 046266 164 ELQSSLRII 172 (174)
Q Consensus 164 ~~~~~l~~~ 172 (174)
++.+.|++.
T Consensus 203 Ei~kvl~ea 211 (245)
T KOG3035|consen 203 EILKVLKEA 211 (245)
T ss_pred HHHHHHHhc
Confidence 999988763
No 37
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=96.97 E-value=0.015 Score=44.59 Aligned_cols=28 Identities=25% Similarity=0.446 Sum_probs=25.1
Q ss_pred eecCCCChhHHHHHHHHHHHHHHHHHHh
Q 046266 146 FFWDNIHPSQNGWHAVFSELQSSLRIIR 173 (174)
Q Consensus 146 lfwD~~HPT~~~h~~iA~~~~~~l~~~~ 173 (174)
+.+|++||+.+||+.||+.+.+.|+.+.
T Consensus 185 ~~~Dg~H~n~~Gy~~~a~~l~~~l~~~~ 212 (216)
T COG2755 185 LTEDGLHPNAKGYQALAEALAEVLAKLL 212 (216)
T ss_pred ccCCCCCcCHhhHHHHHHHHHHHHHHHh
Confidence 3499999999999999999999998764
No 38
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=94.97 E-value=0.022 Score=43.33 Aligned_cols=102 Identities=17% Similarity=0.162 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHCC-CCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEec
Q 046266 9 IIGQLAMNLKLILDLG-VPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLD 87 (174)
Q Consensus 9 ~v~~i~~~v~~L~~~G-ar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D 87 (174)
+..++...|++|.+.- -.-|+++.... +... ..........+.+|..+++.+ ++++++ .+-++.|++
T Consensus 76 ~~~~~~~fv~~iR~~hP~tPIllv~~~~--~~~~--------~~~~~~~~~~~~~~~~~r~~v-~~l~~~-g~~nl~~l~ 143 (178)
T PF14606_consen 76 FRERLDGFVKTIREAHPDTPILLVSPIP--YPAG--------YFDNSRGETVEEFREALREAV-EQLRKE-GDKNLYYLD 143 (178)
T ss_dssp HHHHHHHHHHHHHTT-SSS-EEEEE------TTT--------TS--TTS--HHHHHHHHHHHH-HHHHHT-T-TTEEEE-
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEecCC--cccc--------ccCchHHHHHHHHHHHHHHHH-HHHHHc-CCCcEEEeC
Confidence 4455566666666544 33444444221 1111 112223345788999999999 888654 556777776
Q ss_pred chHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHHHHH
Q 046266 88 LYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSELQS 167 (174)
Q Consensus 88 ~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~~~~ 167 (174)
-..++-+ +.-..-|++|||+.||..+|+.+.+
T Consensus 144 g~~llg~------------------------------------------------d~e~tvDgvHP~DlG~~~~a~~l~~ 175 (178)
T PF14606_consen 144 GEELLGD------------------------------------------------DHEATVDGVHPNDLGMMRMADALEP 175 (178)
T ss_dssp HHHCS---------------------------------------------------------------------------
T ss_pred chhhcCc------------------------------------------------ccccccccccccccccccccccccc
Confidence 5443211 0113579999999999999999887
Q ss_pred HHH
Q 046266 168 SLR 170 (174)
Q Consensus 168 ~l~ 170 (174)
.|+
T Consensus 176 ~ir 178 (178)
T PF14606_consen 176 VIR 178 (178)
T ss_dssp ---
T ss_pred cCC
Confidence 764
No 39
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=94.64 E-value=0.68 Score=35.26 Aligned_cols=22 Identities=14% Similarity=0.101 Sum_probs=20.0
Q ss_pred cCCCChhHHHHHHHHHHHHHHH
Q 046266 148 WDNIHPSQNGWHAVFSELQSSL 169 (174)
Q Consensus 148 wD~~HPT~~~h~~iA~~~~~~l 169 (174)
.|++|+++.+|+.+++.+.+.|
T Consensus 161 ~DgVHwn~~a~r~ls~lll~hI 182 (183)
T cd01842 161 RDGVHWNYVAHRRLSNLLLAHV 182 (183)
T ss_pred CCCcCcCHHHHHHHHHHHHHhh
Confidence 6999999999999999988765
No 40
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.91 E-value=1.6 Score=36.26 Aligned_cols=110 Identities=17% Similarity=0.260 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHCCC---CeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEE
Q 046266 9 IIGQLAMNLKLILDLGV---PKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFT 85 (174)
Q Consensus 9 ~v~~i~~~v~~L~~~Ga---r~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~ 85 (174)
-.+.|.+-|+++...=. -.++.+++|+.- .+.++.-...+|..+.+.+ +.+. |- +
T Consensus 207 W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r--------------~~~l~~dm~~ln~iy~~~v-E~~~----gk---~ 264 (354)
T COG2845 207 WTKEYEKRVDAILKIAHTHKVPVLWVGMPPFR--------------KKKLNADMVYLNKIYSKAV-EKLG----GK---F 264 (354)
T ss_pred HHHHHHHHHHHHHHHhcccCCcEEEeeCCCcc--------------ccccchHHHHHHHHHHHHH-HHhC----Ce---E
Confidence 45566666666654432 257888888763 2456677888999988888 6664 33 4
Q ss_pred ecchHHHHHHHhccccCCCCccccccccccccccCCccccCCCCCCCCcccccCCCCCCceecCCCChhHHHHHHHHHHH
Q 046266 86 LDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGVSKDYLCGNVDKSGKKRYIVCENPKLSFFWDNIHPSQNGWHAVFSEL 165 (174)
Q Consensus 86 ~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylfwD~~HPT~~~h~~iA~~~ 165 (174)
+|+++.|-+.-.+ +...+|+ +..| .+-++.-=|++|.|.+|-+.+|..+
T Consensus 265 i~i~d~~v~e~G~---~f~~~~~--------------------D~NG--------q~vrlR~~DGIh~T~~Gkrkla~~~ 313 (354)
T COG2845 265 IDIWDGFVDEGGK---DFVTTGV--------------------DING--------QPVRLRAKDGIHFTKEGKRKLAFYL 313 (354)
T ss_pred EEecccccccCCc---eeEEecc--------------------ccCC--------ceEEEeccCCceechhhHHHHHHHH
Confidence 4555444332111 0011111 0011 1335666899999999999999999
Q ss_pred HHHHHH
Q 046266 166 QSSLRI 171 (174)
Q Consensus 166 ~~~l~~ 171 (174)
.+.|..
T Consensus 314 ~k~I~~ 319 (354)
T COG2845 314 EKPIRA 319 (354)
T ss_pred HHHHHh
Confidence 888764
No 41
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=88.19 E-value=2.2 Score=35.29 Aligned_cols=64 Identities=14% Similarity=0.094 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEec
Q 046266 8 SIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLD 87 (174)
Q Consensus 8 ~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D 87 (174)
--++.+...++.+.++|.+.|+++++|+. ..+.....++. |..+.+.+ +.+++.+|+.- ++.|
T Consensus 58 ~sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~~gs~A~~~--------------~g~v~~ai-r~iK~~~pdl~-vi~D 120 (322)
T PRK13384 58 LPESALADEIERLYALGIRYVMPFGISHH-KDAKGSDTWDD--------------NGLLARMV-RTIKAAVPEMM-VIPD 120 (322)
T ss_pred ECHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCCCcccccCC--------------CChHHHHH-HHHHHHCCCeE-EEee
Confidence 34688899999999999999999999753 33322211111 34556667 88888888864 3334
Q ss_pred c
Q 046266 88 L 88 (174)
Q Consensus 88 ~ 88 (174)
+
T Consensus 121 V 121 (322)
T PRK13384 121 I 121 (322)
T ss_pred e
Confidence 4
No 42
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=87.94 E-value=2.5 Score=34.85 Aligned_cols=65 Identities=12% Similarity=0.152 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEe
Q 046266 7 KSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTL 86 (174)
Q Consensus 7 ~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~ 86 (174)
.-.++.+.+.++++.++|.+.|+++++|+. ..+.....++. |..+.+.+ +.+++++|+.. ++.
T Consensus 47 r~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~~gs~A~~~--------------~g~v~~ai-r~iK~~~p~l~-vi~ 109 (314)
T cd00384 47 RLSVDSLVEEAEELADLGIRAVILFGIPEH-KDEIGSEAYDP--------------DGIVQRAI-RAIKEAVPELV-VIT 109 (314)
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCCcccccCC--------------CChHHHHH-HHHHHhCCCcE-EEE
Confidence 335788999999999999999999999753 23322211111 23455667 88888888754 333
Q ss_pred cc
Q 046266 87 DL 88 (174)
Q Consensus 87 D~ 88 (174)
|+
T Consensus 110 Dv 111 (314)
T cd00384 110 DV 111 (314)
T ss_pred ee
Confidence 44
No 43
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=87.72 E-value=2.4 Score=35.17 Aligned_cols=64 Identities=16% Similarity=0.181 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEec
Q 046266 8 SIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLD 87 (174)
Q Consensus 8 ~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D 87 (174)
-.++.+.+.++++.++|.+.|+++++|.. ..+.....++. |..+...+ +.+++++|+.. ++.|
T Consensus 56 ~s~d~l~~~v~~~~~~Gi~av~LFgv~~~-Kd~~gs~A~~~--------------~g~v~rai-r~iK~~~p~l~-vi~D 118 (323)
T PRK09283 56 LSIDLLVKEAEEAVELGIPAVALFGVPEL-KDEDGSEAYNP--------------DGLVQRAI-RAIKKAFPELG-VITD 118 (323)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCcCCC-CCcccccccCC--------------CCHHHHHH-HHHHHhCCCcE-EEEe
Confidence 35788889999999999999999999543 33322221111 33456667 88888888764 3445
Q ss_pred c
Q 046266 88 L 88 (174)
Q Consensus 88 ~ 88 (174)
+
T Consensus 119 V 119 (323)
T PRK09283 119 V 119 (323)
T ss_pred e
Confidence 4
No 44
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=87.57 E-value=2.5 Score=34.94 Aligned_cols=65 Identities=14% Similarity=0.077 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHCCCCeEEEecCCCCC-cccc-cccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEE
Q 046266 8 SIIGQLAMNLKLILDLGVPKIAVTSMEPMG-CLPQ-LSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFT 85 (174)
Q Consensus 8 ~~v~~i~~~v~~L~~~Gar~~~v~nlpplg-~~P~-~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~ 85 (174)
--++.+.+.++++.++|.+.|+++++|+-. ..+. ....++. |..+.+.+ +.+++++|+.. ++
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~~gs~a~~~--------------~g~v~~ai-r~iK~~~pdl~-vi 111 (320)
T cd04824 48 YGVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDRSGSAADDE--------------DGPVIQAI-KLIREEFPELL-IA 111 (320)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcCccccccCC--------------CChHHHHH-HHHHHhCCCcE-EE
Confidence 346888999999999999999999997532 3333 2221111 33445667 88888888754 33
Q ss_pred ecc
Q 046266 86 LDL 88 (174)
Q Consensus 86 ~D~ 88 (174)
.|+
T Consensus 112 ~Dv 114 (320)
T cd04824 112 CDV 114 (320)
T ss_pred Eee
Confidence 344
No 45
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=87.09 E-value=2.6 Score=34.88 Aligned_cols=66 Identities=18% Similarity=0.205 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCeEEEecCCC-CCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEE
Q 046266 7 KSIIGQLAMNLKLILDLGVPKIAVTSMEP-MGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFT 85 (174)
Q Consensus 7 ~~~v~~i~~~v~~L~~~Gar~~~v~nlpp-lg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~ 85 (174)
.--++.+.+.++++.++|.+.|++++++| -..-+.....++. |.-+...+ +.+++++|+.. ++
T Consensus 50 r~s~d~l~~~v~~~~~~Gi~~v~lFgv~~~~~KD~~gs~A~~~--------------~g~v~~ai-r~iK~~~p~l~-vi 113 (320)
T cd04823 50 RLSIDELLKEAEEAVDLGIPAVALFPVTPPELKSEDGSEAYNP--------------DNLVCRAI-RAIKEAFPELG-II 113 (320)
T ss_pred eeCHHHHHHHHHHHHHcCCCEEEEecCCCcccCCcccccccCC--------------CChHHHHH-HHHHHhCCCcE-EE
Confidence 33578899999999999999999999943 2233322221111 33455667 88888888754 34
Q ss_pred ecc
Q 046266 86 LDL 88 (174)
Q Consensus 86 ~D~ 88 (174)
.|+
T Consensus 114 ~DV 116 (320)
T cd04823 114 TDV 116 (320)
T ss_pred Eee
Confidence 344
No 46
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=87.04 E-value=4.9 Score=32.23 Aligned_cols=81 Identities=14% Similarity=0.162 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEE
Q 046266 6 TKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFT 85 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~ 85 (174)
++++++.+...++.|....-.-=+|+++.|+-.+-.+.... + -..|..++ +.|+..+ .++.+.++ ++.|
T Consensus 147 ~~ei~~~l~~~~~~l~~~nP~~kiilTVSPVrl~~T~~~~d---~--~~an~~SK---s~Lr~a~-~~l~~~~~--~v~Y 215 (251)
T PF08885_consen 147 VEEILEDLEAIIDLLRSINPDIKIILTVSPVRLIATFRDRD---G--LVANQYSK---STLRAAA-HELVRAFD--DVDY 215 (251)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEEeccchhhccccccc---c--hhhhhhhH---HHHHHHH-HHHHhcCC--CceE
Confidence 57788888888888888877656788888875433222211 1 11233333 2456666 77776554 5677
Q ss_pred ecchHHHHHHHh
Q 046266 86 LDLYGAFMSALM 97 (174)
Q Consensus 86 ~D~~~~~~~i~~ 97 (174)
|=.|.++.+-+.
T Consensus 216 FPSYEiv~d~lr 227 (251)
T PF08885_consen 216 FPSYEIVMDELR 227 (251)
T ss_pred cchHhhccCccc
Confidence 777776665443
No 47
>PLN02757 sirohydrochlorine ferrochelatase
Probab=85.51 E-value=3.2 Score=30.71 Aligned_cols=64 Identities=6% Similarity=0.059 Sum_probs=43.8
Q ss_pred HHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEecc---h
Q 046266 13 LAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLDL---Y 89 (174)
Q Consensus 13 i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D~---~ 89 (174)
+.+.|++|.+.|+++|+| .|.++... ......+.+.+ .+++.++|+.+|.+... +
T Consensus 60 l~eal~~l~~~g~~~vvV--------vP~FL~~G-------------~H~~~DIp~~v-~~~~~~~p~~~i~~~~pLG~~ 117 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIV--------SPFFLSPG-------------RHWQEDIPALT-AEAAKEHPGVKYLVTAPIGLH 117 (154)
T ss_pred HHHHHHHHHHCCCCEEEE--------EEhhhcCC-------------cchHhHHHHHH-HHHHHHCCCcEEEECCCCCCC
Confidence 667778888888888877 46666542 11134467777 88888899999887654 4
Q ss_pred HHHHHHHhc
Q 046266 90 GAFMSALMK 98 (174)
Q Consensus 90 ~~~~~i~~~ 98 (174)
..+.+++..
T Consensus 118 p~l~~ll~~ 126 (154)
T PLN02757 118 ELMVDVVND 126 (154)
T ss_pred HHHHHHHHH
Confidence 466666655
No 48
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=85.38 E-value=3.3 Score=34.36 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHCCCCeEEEecCCC-CCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEec
Q 046266 9 IIGQLAMNLKLILDLGVPKIAVTSMEP-MGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLD 87 (174)
Q Consensus 9 ~v~~i~~~v~~L~~~Gar~~~v~nlpp-lg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D 87 (174)
.++.+.+.+++++++|.+.|+++++.+ -...+.....++. |.-+...+ +.+++.+|+.. ++.|
T Consensus 55 sid~l~~~v~~~~~~GI~~v~lFgvi~~~~Kd~~gs~a~~~--------------~g~v~~ai-r~iK~~~pdl~-vi~D 118 (324)
T PF00490_consen 55 SIDSLVKEVEEAVDLGIRAVILFGVIDPSKKDEEGSEAYNP--------------DGLVQRAI-RAIKKAFPDLL-VITD 118 (324)
T ss_dssp EHHHHHHHHHHHHHTT--EEEEEEE-SCSC-BSS-GGGGST--------------TSHHHHHH-HHHHHHSTTSE-EEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeeCCcccCCcchhcccCC--------------CChHHHHH-HHHHHhCCCcE-EEEe
Confidence 367888999999999999999999832 2122211111111 33455667 88888888854 4445
Q ss_pred c
Q 046266 88 L 88 (174)
Q Consensus 88 ~ 88 (174)
+
T Consensus 119 v 119 (324)
T PF00490_consen 119 V 119 (324)
T ss_dssp E
T ss_pred c
Confidence 4
No 49
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=79.85 E-value=10 Score=29.82 Aligned_cols=61 Identities=16% Similarity=0.226 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHH-HHHHHHHHHHhhhCCCCeEEEe
Q 046266 8 SIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQ-LLEQEILQNFNNESKRPVIFTL 86 (174)
Q Consensus 8 ~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~-~L~~~l~~~l~~~~~~~~i~~~ 86 (174)
.+.+=+.+.++.|...|.|+|+|+|=- - + |. .|...+ ++++.++++..+.++
T Consensus 83 t~~~~l~di~~sl~~~Gf~~ivivngH-g-------------G------------N~~~l~~~~-~~l~~~~~~~~v~~~ 135 (237)
T PF02633_consen 83 TLIALLRDILRSLARHGFRRIVIVNGH-G-------------G------------NIAALEAAA-RELRQEYPGVKVFVI 135 (237)
T ss_dssp HHHHHHHHHHHHHHHHT--EEEEEESS-T-------------T------------HHHHHHHHH-HHHHHHGCC-EEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEECC-H-------------h------------HHHHHHHHH-HHHHhhCCCcEEEEe
Confidence 445556777889999999999999831 0 1 22 455556 777777789999999
Q ss_pred cchHHHHHH
Q 046266 87 DLYGAFMSA 95 (174)
Q Consensus 87 D~~~~~~~i 95 (174)
+.+.+....
T Consensus 136 ~~~~~~~~~ 144 (237)
T PF02633_consen 136 NWWQLAEDE 144 (237)
T ss_dssp EGGGCSHCH
T ss_pred echhccchh
Confidence 998876554
No 50
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=78.63 E-value=6.4 Score=26.36 Aligned_cols=53 Identities=15% Similarity=0.129 Sum_probs=32.5
Q ss_pred HHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEec
Q 046266 13 LAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLD 87 (174)
Q Consensus 13 i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D 87 (174)
+.+.+++|.+.|+++++| .|.+..... .....+...+ +.++.++++.+|.+.+
T Consensus 46 ~~~~l~~l~~~g~~~v~v--------vPlfl~~G~-------------h~~~dip~~~-~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 46 LAEALDELAAQGATRIVV--------VPLFLLAGG-------------HVKEDIPAAL-AAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHHHHHcCCCEEEE--------EeeEeCCCc-------------cccccHHHHH-HHHHHHCCCeEEEecC
Confidence 456677777778887776 355554321 1123455556 6666777888887754
No 51
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=72.65 E-value=6.1 Score=32.61 Aligned_cols=31 Identities=16% Similarity=0.341 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEecCCCC
Q 046266 6 TKSIIGQLAMNLKLILDLGVPKIAVTSMEPM 36 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~Gar~~~v~nlppl 36 (174)
..-.++.+.+.++++.++|.+-|+++++|+-
T Consensus 56 ~r~s~d~l~~~~~~~~~lGi~av~LFgvp~~ 86 (330)
T COG0113 56 YRYSLDRLVEEAEELVDLGIPAVILFGVPDD 86 (330)
T ss_pred eeccHHHHHHHHHHHHhcCCCEEEEeCCCcc
Confidence 3445788899999999999999999999964
No 52
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=71.47 E-value=3.8 Score=27.62 Aligned_cols=55 Identities=11% Similarity=0.098 Sum_probs=34.3
Q ss_pred HHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEecch
Q 046266 13 LAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLDLY 89 (174)
Q Consensus 13 i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D~~ 89 (174)
+.+.+++|.+.|+++|+|+ |.++... ......+.+.+ +.++.++|+.+|.+...-
T Consensus 39 l~~~l~~l~~~g~~~ivvv--------P~fL~~G-------------~h~~~DIp~~l-~~~~~~~~~~~v~~~~pL 93 (105)
T PF01903_consen 39 LEEALERLVAQGARRIVVV--------PYFLFPG-------------YHVKRDIPEAL-AEARERHPGIEVRVAPPL 93 (105)
T ss_dssp CHHCCHHHHCCTCSEEEEE--------EESSSSS-------------HHHHCHHHHHH-CHHHHCSTTEEEEE---G
T ss_pred HHHHHHHHHHcCCCeEEEE--------eeeecCc-------------cchHhHHHHHH-HHHHhhCCceEEEECCCC
Confidence 4556778888888888774 6665432 11112356667 888888898888876543
No 53
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=70.43 E-value=4.3 Score=26.37 Aligned_cols=22 Identities=18% Similarity=0.164 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHCCCCeEEEecC
Q 046266 12 QLAMNLKLILDLGVPKIAVTSM 33 (174)
Q Consensus 12 ~i~~~v~~L~~~Gar~~~v~nl 33 (174)
.+.+.+.+|.++||+-|+++.+
T Consensus 51 ~~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 51 QVWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp CHHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHHcCCCEEEEEec
Confidence 3567899999999999999875
No 54
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=69.47 E-value=7.1 Score=26.74 Aligned_cols=23 Identities=13% Similarity=0.124 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHCCCCeEEEecC
Q 046266 11 GQLAMNLKLILDLGVPKIAVTSM 33 (174)
Q Consensus 11 ~~i~~~v~~L~~~Gar~~~v~nl 33 (174)
+.+.+.+++|.++||+-|+|+.+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 45778899999999999999764
No 55
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=69.23 E-value=5.3 Score=28.75 Aligned_cols=29 Identities=24% Similarity=0.331 Sum_probs=24.9
Q ss_pred CCceecCCCChhHHHHHHHHHHHHHHHHH
Q 046266 143 KLSFFWDNIHPSQNGWHAVFSELQSSLRI 171 (174)
Q Consensus 143 ~~ylfwD~~HPT~~~h~~iA~~~~~~l~~ 171 (174)
+.|++-|.+||...|+-.+-+.|.+.+++
T Consensus 101 ~~yfm~D~iHlgw~GWv~vd~~i~~f~~~ 129 (130)
T PF04914_consen 101 EPYFMQDTIHLGWKGWVYVDQAIYPFYKE 129 (130)
T ss_dssp STTSBSSSSSB-THHHHHHHHHHHHHHHS
T ss_pred CCceeeecccCchhhHHHHHHHHHHHHhc
Confidence 57899999999999999999999888763
No 56
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=65.44 E-value=25 Score=26.65 Aligned_cols=55 Identities=11% Similarity=0.113 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEE
Q 046266 6 TKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFT 85 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~ 85 (174)
+..+-..|.+.|.+|++.|.+.|+.-+ .+| +-.+-.+.+ .+|++++|+.++..
T Consensus 24 ~~~ik~~L~~~i~~lie~G~~~fi~Gg--alG------------------------~D~waae~v-l~LK~~yp~ikL~~ 76 (177)
T PF06908_consen 24 IQVIKKALKKQIIELIEEGVRWFITGG--ALG------------------------VDLWAAEVV-LELKKEYPEIKLAL 76 (177)
T ss_dssp HHHHHHHHHHHHHHHHTTT--EEEE-----TT------------------------HHHHHHHHH-HTTTTT-TT-EEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECC--ccc------------------------HHHHHHHHH-HHHHhhhhheEEEE
Confidence 456778899999999999999886643 232 122334556 77888888887766
Q ss_pred ec
Q 046266 86 LD 87 (174)
Q Consensus 86 ~D 87 (174)
+=
T Consensus 77 v~ 78 (177)
T PF06908_consen 77 VL 78 (177)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 57
>PRK13660 hypothetical protein; Provisional
Probab=60.54 E-value=65 Score=24.55 Aligned_cols=61 Identities=11% Similarity=0.171 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEE
Q 046266 6 TKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFT 85 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~ 85 (174)
+..+-..|.+.|..+++.|.+.|++-+ .+| +-.+-.+.+ -+|++++|+.++..
T Consensus 24 ~~~IK~aL~~~l~~~~e~G~~wfi~gg--alG------------------------~d~wAaEvv-l~LK~~yp~lkL~~ 76 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEEGLEWVIISG--QLG------------------------VELWAAEVV-LELKEEYPDLKLAV 76 (182)
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEECC--cch------------------------HHHHHHHHH-HHHHhhCCCeEEEE
Confidence 455677888999999999999887644 333 122334556 77888889888777
Q ss_pred ecchHHHH
Q 046266 86 LDLYGAFM 93 (174)
Q Consensus 86 ~D~~~~~~ 93 (174)
+=.+.-+.
T Consensus 77 ~~PF~~q~ 84 (182)
T PRK13660 77 ITPFEEHG 84 (182)
T ss_pred EeCccchh
Confidence 65554333
No 58
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=59.80 E-value=34 Score=26.55 Aligned_cols=90 Identities=19% Similarity=0.243 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHCCC--CeEEEecCCCCCcccccccccCcCcch-----hHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 046266 7 KSIIGQLAMNLKLILDLGV--PKIAVTSMEPMGCLPQLSAVSSYENCS-----ESLNSASKFHNQLLEQEILQNFNNESK 79 (174)
Q Consensus 7 ~~~v~~i~~~v~~L~~~Ga--r~~~v~nlpplg~~P~~~~~~~~~~~~-----~~~~~~~~~~N~~L~~~l~~~l~~~~~ 79 (174)
...+..+...+.++.+... .++++.+++|... .......++.|. .-.+.....+|..+...+ ..
T Consensus 134 ~~~l~~~~~~~~~~~~~~~~~~~v~~r~~~P~h~--~~~~~~~gg~c~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 204 (263)
T PF13839_consen 134 RNRLRTLADWVRRLLDRSKPPTRVFWRTTSPVHF--EGGDWNSGGSCNPPRREEITNEQIDELNEALREAL-------KK 204 (263)
T ss_pred HHHHHHHHHHHHhhhccccccceEEEEecCCccc--cccccccCCCcCcccccCCCHHHHHHHHHHHHHHh-------hc
Confidence 3445555556665665554 6777777766532 111111122343 112334444444443322 15
Q ss_pred CCeEEEecchHHHHHHHh-ccccCCCCcc
Q 046266 80 RPVIFTLDLYGAFMSALM-KKENHSGNVK 107 (174)
Q Consensus 80 ~~~i~~~D~~~~~~~i~~-~~~~~p~~yG 107 (174)
+.++.++|++..+..... + +||+.|+
T Consensus 205 ~~~~~~ldi~~~~~~~r~~d--~H~~~~~ 231 (263)
T PF13839_consen 205 NSRVHLLDIFTMLSSFRPDD--AHPGIYR 231 (263)
T ss_pred CCCceeeeecchhhhccccc--cCccccc
Confidence 778999999766666554 3 4566553
No 59
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=58.98 E-value=4.7 Score=29.35 Aligned_cols=16 Identities=6% Similarity=0.148 Sum_probs=14.2
Q ss_pred HCCCCeEEEecCCCCC
Q 046266 22 DLGVPKIAVTSMEPMG 37 (174)
Q Consensus 22 ~~Gar~~~v~nlpplg 37 (174)
..|||.|++.|+|.+.
T Consensus 42 ~~GARdFVfwNipQiQ 57 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQ 57 (169)
T ss_pred ccCccceEEecchhhc
Confidence 5799999999999875
No 60
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=57.05 E-value=56 Score=22.26 Aligned_cols=18 Identities=28% Similarity=0.453 Sum_probs=11.6
Q ss_pred HHHHHHHHHHCCCCeEEE
Q 046266 13 LAMNLKLILDLGVPKIAV 30 (174)
Q Consensus 13 i~~~v~~L~~~Gar~~~v 30 (174)
+.+.+++|.+.|+++++|
T Consensus 47 ~~~~l~~l~~~g~~~i~v 64 (117)
T cd03414 47 LPEALERLRALGARRVVV 64 (117)
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 455666666667776665
No 61
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=56.15 E-value=40 Score=27.55 Aligned_cols=64 Identities=16% Similarity=0.166 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHCCCCeEEEecCCCCC-cccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEec
Q 046266 9 IIGQLAMNLKLILDLGVPKIAVTSMEPMG-CLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLD 87 (174)
Q Consensus 9 ~v~~i~~~v~~L~~~Gar~~~v~nlpplg-~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D 87 (174)
=++.+.+.+..|.+.|.|.++++++||-+ .-|...... .=|.-.-..+ ..|+..+|+.- ++.|
T Consensus 67 G~~rL~e~l~plv~~Gl~sViLfgvv~~~~Kd~~gs~Ad--------------s~~gpvi~ai-~~lr~~fPdL~-i~cD 130 (340)
T KOG2794|consen 67 GVNRLKEELAPLVAKGLRSVILFGVVPEALKDPTGSEAD--------------SDNGPVIRAI-RLLRDRFPDLV-IACD 130 (340)
T ss_pred HHHHHHHHHHHHHHhccceEEEecCCCccccCccccccc--------------CCCCcHHHHH-HHHHHhCcceE-EEee
Confidence 46778999999999999999999997422 111111110 0123334556 77888889864 3444
Q ss_pred c
Q 046266 88 L 88 (174)
Q Consensus 88 ~ 88 (174)
+
T Consensus 131 V 131 (340)
T KOG2794|consen 131 V 131 (340)
T ss_pred e
Confidence 4
No 62
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=55.93 E-value=1.3e+02 Score=25.82 Aligned_cols=28 Identities=29% Similarity=0.183 Sum_probs=24.2
Q ss_pred CCCceecCCCChhHHHHHHHHHHHHHHH
Q 046266 142 PKLSFFWDNIHPSQNGWHAVFSELQSSL 169 (174)
Q Consensus 142 ~~~ylfwD~~HPT~~~h~~iA~~~~~~l 169 (174)
+.+++--|-+|.++.||.++|..++..|
T Consensus 323 d~~ffa~DcfHlS~~GHa~~ak~lWNnl 350 (397)
T KOG3670|consen 323 DLTFFAPDCFHLSQRGHAIAAKHLWNNL 350 (397)
T ss_pred CchhcccCccccchHHHHHHHHHHHHHh
Confidence 3467778999999999999999998765
No 63
>cd03311 CIMS_C_terminal_like CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers the C-terminal barrel, and a few single-barrel sequences most similar to the C-terminal barrel. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Sidechains from
Probab=54.11 E-value=49 Score=27.16 Aligned_cols=37 Identities=11% Similarity=0.038 Sum_probs=30.0
Q ss_pred cchHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCccc
Q 046266 3 PGLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLP 40 (174)
Q Consensus 3 ~~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P 40 (174)
.+++..++..+...++.|+++|++ ++-++=|.+...+
T Consensus 147 ~el~~~la~~~~~e~~~l~~aG~~-~iQiDEP~l~~~~ 183 (332)
T cd03311 147 EELAMDLALALREEIRDLYDAGCR-YIQIDEPALAEGL 183 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC-EEEeecchhhccC
Confidence 468889999999999999999995 7777777665443
No 64
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=50.57 E-value=61 Score=24.94 Aligned_cols=48 Identities=23% Similarity=0.332 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEecch
Q 046266 11 GQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLDLY 89 (174)
Q Consensus 11 ~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D~~ 89 (174)
..+...++.|.+.|+++|.+..+ +. . ...+ +.+.+++|+++|+..-+-
T Consensus 136 ~Tl~~ai~~L~~~G~~~I~v~~l--l~-~---------------------------~~gl-~~l~~~~p~v~i~~~~id 183 (207)
T TIGR01091 136 GTMIAALDLLKKRGAKKIKVLSI--VA-A---------------------------PEGI-EAVEKAHPDVDIYTAAID 183 (207)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEE--ec-C---------------------------HHHH-HHHHHHCCCCEEEEEEEC
Confidence 35778899999999999988876 21 1 1223 566667899998876543
No 65
>PRK09121 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=50.18 E-value=46 Score=27.80 Aligned_cols=34 Identities=18% Similarity=0.061 Sum_probs=27.4
Q ss_pred cchHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCC
Q 046266 3 PGLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMG 37 (174)
Q Consensus 3 ~~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg 37 (174)
.+++..+...+.+.++.|+++|+|.| -++=|.+.
T Consensus 148 ~el~~dlA~al~~Ei~~L~~aG~~~I-QiDeP~l~ 181 (339)
T PRK09121 148 EKLAWEFAKILNQEAKELEAAGVDII-QFDEPAFN 181 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEE-EecccHHh
Confidence 56788899999999999999999865 45555554
No 66
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=49.62 E-value=27 Score=28.03 Aligned_cols=27 Identities=15% Similarity=0.229 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCeEEEecC
Q 046266 7 KSIIGQLAMNLKLILDLGVPKIAVTSM 33 (174)
Q Consensus 7 ~~~v~~i~~~v~~L~~~Gar~~~v~nl 33 (174)
+.++.-+.+.++.|+..|.|+|+++|=
T Consensus 86 ~t~~~~~~~~~~Sl~~~Gfrk~v~vNg 112 (250)
T COG1402 86 ETLIALLVELVESLARHGFRKFVIVNG 112 (250)
T ss_pred HHHHHHHHHHHHHHHhcCccEEEEEec
Confidence 345666777888999999999999983
No 67
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=48.65 E-value=1e+02 Score=25.21 Aligned_cols=20 Identities=15% Similarity=0.225 Sum_probs=17.7
Q ss_pred HHHHHHHHCCCCeEEEecCC
Q 046266 15 MNLKLILDLGVPKIAVTSME 34 (174)
Q Consensus 15 ~~v~~L~~~Gar~~~v~nlp 34 (174)
-.+++|..+|+|.|+|+.-|
T Consensus 36 y~l~~L~~aGI~dI~II~~~ 55 (286)
T COG1209 36 YPLETLMLAGIRDILIVVGP 55 (286)
T ss_pred hHHHHHHHcCCceEEEEecC
Confidence 35789999999999999887
No 68
>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism]
Probab=45.76 E-value=94 Score=25.94 Aligned_cols=79 Identities=15% Similarity=0.171 Sum_probs=45.9
Q ss_pred HHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHH------------------HHHHHHHHHHHHHHHH
Q 046266 13 LAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSA------------------SKFHNQLLEQEILQNF 74 (174)
Q Consensus 13 i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~------------------~~~~N~~L~~~l~~~l 74 (174)
+.+.|++|.+.|.++++++=|-| .+..... +...+.+.+. -..|...+.+.+ ++-
T Consensus 104 i~~~v~~l~~~gv~~iv~~pLyP-----qyS~sTt-~s~~~~~~~al~~~~~~~~i~~I~~~~~~p~yI~a~a~~I-~~~ 176 (320)
T COG0276 104 IEEAVEELKKDGVERIVVLPLYP-----QYSSSTT-GSYVDELARALKELRGQPKISTIPDYYDEPLYIEALADSI-REK 176 (320)
T ss_pred HHHHHHHHHHcCCCeEEEEECCc-----ccccccH-HHHHHHHHHHHHhcCCCCceEEecCccCChHHHHHHHHHH-HHH
Confidence 56788999999999998876643 3322210 0111111111 134566666666 544
Q ss_pred hhhCC-CCeEEEecchHHHHHHHhc
Q 046266 75 NNESK-RPVIFTLDLYGAFMSALMK 98 (174)
Q Consensus 75 ~~~~~-~~~i~~~D~~~~~~~i~~~ 98 (174)
-++++ +...++|..+++=...++.
T Consensus 177 ~~~~~~~~~~llfSaHglP~~~~~~ 201 (320)
T COG0276 177 LAKHPRDDDVLLFSAHGLPKRYIDE 201 (320)
T ss_pred HHhcCCCCeEEEEecCCCchhhhhc
Confidence 44444 5567788888887766665
No 69
>COG0620 MetE Methionine synthase II (cobalamin-independent) [Amino acid transport and metabolism]
Probab=45.52 E-value=89 Score=26.11 Aligned_cols=79 Identities=16% Similarity=0.007 Sum_probs=48.2
Q ss_pred cchHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCe
Q 046266 3 PGLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPV 82 (174)
Q Consensus 3 ~~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~ 82 (174)
.+++.++...|.+.|+.|+++|++ ++=++-|.++..+..+. . .+.+..++..+|..+...- .+.+
T Consensus 150 ~el~~~iA~al~~ev~~l~~agi~-~iQiDEpal~~~~~~~~-----~-~~~l~~~~~~~~~~~~~~~--------~d~~ 214 (330)
T COG0620 150 EELAKDIALALRDEVKDLEDAGIK-IIQIDEPALREGLPLRR-----D-DDYLEWAVEAINLAAAGVG--------ADTQ 214 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC-EEeechhhhhcCCcccc-----c-hHHHHHHHHHHHHHHhcCC--------CCcE
Confidence 467889999999999999999987 44556666655433322 1 1444555666665544322 3555
Q ss_pred E----EEecchHHHHHHH
Q 046266 83 I----FTLDLYGAFMSAL 96 (174)
Q Consensus 83 i----~~~D~~~~~~~i~ 96 (174)
| .+.++...+..+-
T Consensus 215 i~~HiCy~e~~~~~~~i~ 232 (330)
T COG0620 215 IHLHICYSEFNDIPDAIE 232 (330)
T ss_pred EEEEEECCcccchhHHHh
Confidence 4 4555555544443
No 70
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=45.51 E-value=52 Score=26.10 Aligned_cols=91 Identities=12% Similarity=0.170 Sum_probs=53.0
Q ss_pred HHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHH------------HHHHHHHHHHHHHhhhCC--
Q 046266 14 AMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKF------------HNQLLEQEILQNFNNESK-- 79 (174)
Q Consensus 14 ~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~------------~N~~L~~~l~~~l~~~~~-- 79 (174)
..++.+|.+.|-+.++|-.+ .-+|..... ......+..+.. |-.-....+ +.++.++|
T Consensus 63 ~~aL~klk~~gy~eviiQ~l---hiIpG~EyE----klvr~V~~~~~dF~~lkig~PlLy~k~DYe~~v-~aik~~~ppl 134 (265)
T COG4822 63 IQALNKLKDQGYEEVIIQPL---HIIPGIEYE----KLVREVNKYSNDFKRLKIGRPLLYYKNDYEICV-EAIKDQIPPL 134 (265)
T ss_pred HHHHHHHHHccchheeeeee---eecCchHHH----HHHHHHHHHhhhhheeecCCceeechhhHHHHH-HHHHHhcCCc
Confidence 35688899999999888543 445543221 112222222221 223445566 77777777
Q ss_pred -CCeEEE----------ecchHHHHHHHhccccCCCCcccccccccccccc
Q 046266 80 -RPVIFT----------LDLYGAFMSALMKKENHSGNVKLKTSLQPCCAGV 119 (174)
Q Consensus 80 -~~~i~~----------~D~~~~~~~i~~~~~~~p~~yGf~~~~~aCc~~~ 119 (174)
...+++ +-.|+.++.++.+ |||+++.-+|..++
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~YacLd~~~~~-------~~f~~v~v~~ve~y 178 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAYACLDHVLDE-------YGFDNVFVAAVEGY 178 (265)
T ss_pred CcCeEEEEEecCCCccHHHHHHHHHHHHHh-------cCCCceEEEEecCC
Confidence 333333 3457777777776 88988877776554
No 71
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=44.35 E-value=75 Score=20.35 Aligned_cols=65 Identities=12% Similarity=-0.030 Sum_probs=31.0
Q ss_pred HCCCCeEEEecCCCCCccccc-ccccCcCcchhHHH---HHHHHHHHHHHHHHHHHHhhhCCCCe-EEEec
Q 046266 22 DLGVPKIAVTSMEPMGCLPQL-SAVSSYENCSESLN---SASKFHNQLLEQEILQNFNNESKRPV-IFTLD 87 (174)
Q Consensus 22 ~~Gar~~~v~nlpplg~~P~~-~~~~~~~~~~~~~~---~~~~~~N~~L~~~l~~~l~~~~~~~~-i~~~D 87 (174)
=-|||.|+++.+|=..-.|.. .......+..+.+. ..-...-.+|++.+ +.|+++.++.+ -.++|
T Consensus 8 ~p~arSvIv~a~~Y~~~~~~~~~~~~~~~g~iarYA~G~DYH~vlk~~L~~l~-~~i~~~~~~~~~r~~VD 77 (78)
T PF08331_consen 8 LPGARSVIVLAFPYYPEPPPPPPPPGPGRGRIARYAWGRDYHKVLKKKLEQLA-EWIRELGPDFEYRIFVD 77 (78)
T ss_pred CCCCcEEEEEEccCCCccccccccCCCCCeeEeehhccCChHHHHHHHHHHHH-HHHHHHCCCCCeEEeec
Confidence 358999999988733201111 01111112222222 22233335566666 66777777753 33444
No 72
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=43.85 E-value=32 Score=23.49 Aligned_cols=18 Identities=22% Similarity=0.331 Sum_probs=15.7
Q ss_pred HHHHHHHHHHCCCCeEEE
Q 046266 13 LAMNLKLILDLGVPKIAV 30 (174)
Q Consensus 13 i~~~v~~L~~~Gar~~~v 30 (174)
+.+.+++|...|+++|+|
T Consensus 44 i~~~l~~l~~~G~~~i~l 61 (103)
T cd03413 44 LDDVLAKLKKAGIKKVTL 61 (103)
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 567888999999999877
No 73
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=43.39 E-value=86 Score=24.12 Aligned_cols=22 Identities=18% Similarity=0.289 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHCCCCeEEEecC
Q 046266 12 QLAMNLKLILDLGVPKIAVTSM 33 (174)
Q Consensus 12 ~i~~~v~~L~~~Gar~~~v~nl 33 (174)
.+...++.|.+.|+++|.+..+
T Consensus 139 Tl~~ai~~L~~~G~~~I~~~~l 160 (209)
T PRK00129 139 SAIAAIDLLKKRGAKNIKVLCL 160 (209)
T ss_pred HHHHHHHHHHHcCCCEEEEEEE
Confidence 5778899999999999988886
No 74
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=43.22 E-value=36 Score=28.75 Aligned_cols=35 Identities=9% Similarity=0.022 Sum_probs=28.8
Q ss_pred cchHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCc
Q 046266 3 PGLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGC 38 (174)
Q Consensus 3 ~~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~ 38 (174)
.+++.+++..+.+.++.|+++|+|.| -++=|.+..
T Consensus 162 ~~~~~dlA~al~~Ei~~L~~aG~~~I-QiDep~l~~ 196 (368)
T PRK06520 162 DDYFDDLAKTWRDAIKAFYDAGCRYL-QLDDTVWAY 196 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEE-EecCcchhh
Confidence 47888999999999999999999865 556676654
No 75
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=42.72 E-value=9.5 Score=23.48 Aligned_cols=8 Identities=50% Similarity=1.726 Sum_probs=7.2
Q ss_pred ecCCCChh
Q 046266 147 FWDNIHPS 154 (174)
Q Consensus 147 fwD~~HPT 154 (174)
|||.+||.
T Consensus 53 ~W~~l~P~ 60 (62)
T PF06812_consen 53 YWDSLHPQ 60 (62)
T ss_pred CCcccCCC
Confidence 89999996
No 76
>COG4474 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=40.96 E-value=1.6e+02 Score=22.36 Aligned_cols=57 Identities=12% Similarity=0.227 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEE
Q 046266 6 TKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFT 85 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~ 85 (174)
+..+-+.|...|..|.+.|.+-++|.| .||. -.+-...+ ..|+++||..++.+
T Consensus 24 ~~~IKkai~~~l~~lleeGleW~litG--qLG~------------------------E~WA~Evv-~eLk~eyp~ik~av 76 (180)
T COG4474 24 VSYIKKAIKKKLEALLEEGLEWVLITG--QLGF------------------------ELWAAEVV-IELKEEYPHIKLAV 76 (180)
T ss_pred HHHHHHHHHHHHHHHHhcCceEEEEec--cccH------------------------HHHHHHHH-HHHHhhCCCeeEEE
Confidence 445678889999999999999999988 5652 12223445 77888888877766
Q ss_pred ecch
Q 046266 86 LDLY 89 (174)
Q Consensus 86 ~D~~ 89 (174)
+-.+
T Consensus 77 itpF 80 (180)
T COG4474 77 ITPF 80 (180)
T ss_pred Eech
Confidence 5443
No 77
>cd03415 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelatase (CbiX) single domain. Proteins in this subgroup contain a single CbiX domain N-terminal to a precorrin-8X methylmutase (CbiC) domain. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, while CbiC catalyzes the conversion of cobalt-precorrin 8 to cobyrinic acid by methyl rearrangement. Both CbiX and CbiC are involved in vitamin B12 biosynthesis.
Probab=40.96 E-value=35 Score=24.22 Aligned_cols=20 Identities=20% Similarity=0.190 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHCCCCeEEEe
Q 046266 12 QLAMNLKLILDLGVPKIAVT 31 (174)
Q Consensus 12 ~i~~~v~~L~~~Gar~~~v~ 31 (174)
.+.+.|++|.+.|+++|+|+
T Consensus 45 ~l~~~l~~l~~~G~~~ivVv 64 (125)
T cd03415 45 NWRDLLNELLSEGYGHIIIA 64 (125)
T ss_pred CHHHHHHHHHHCCCCEEEEe
Confidence 47788999999999999996
No 78
>PRK05222 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional
Probab=40.82 E-value=1.1e+02 Score=28.65 Aligned_cols=34 Identities=6% Similarity=-0.017 Sum_probs=27.5
Q ss_pred cchHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCC
Q 046266 3 PGLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMG 37 (174)
Q Consensus 3 ~~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg 37 (174)
.++..++...|.+.|+.|+++|++. +=++=|.+.
T Consensus 573 ~e~~~dlA~al~~Ev~~L~~aG~~~-IQiDEPal~ 606 (758)
T PRK05222 573 EETARQIALAIRDEVLDLEAAGIKI-IQIDEPALR 606 (758)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCE-EEeeCchhh
Confidence 4678899999999999999999985 455656653
No 79
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=40.58 E-value=39 Score=24.80 Aligned_cols=23 Identities=26% Similarity=0.372 Sum_probs=19.9
Q ss_pred HHHHHHHHHHCCCCeEEEecCCC
Q 046266 13 LAMNLKLILDLGVPKIAVTSMEP 35 (174)
Q Consensus 13 i~~~v~~L~~~Gar~~~v~nlpp 35 (174)
|.+.|++|.+.|+++++++-+-|
T Consensus 101 i~~~l~~l~~~g~~~iivlPl~P 123 (159)
T cd03411 101 IEEALEELKADGVDRIVVLPLYP 123 (159)
T ss_pred HHHHHHHHHHcCCCEEEEEECCc
Confidence 67889999999999999987744
No 80
>PRK06233 hypothetical protein; Provisional
Probab=40.47 E-value=43 Score=28.35 Aligned_cols=35 Identities=11% Similarity=0.098 Sum_probs=28.3
Q ss_pred cchHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCc
Q 046266 3 PGLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGC 38 (174)
Q Consensus 3 ~~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~ 38 (174)
.++...++..+.+.++.|+++|+|.| -++=|.++.
T Consensus 163 eel~~dlA~a~~~Ei~~L~~aG~~~I-QiDeP~~~~ 197 (372)
T PRK06233 163 DDYLDDLAQAYHDTIQHFYDLGARYI-QLDDTTWAY 197 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEE-EEcCCCHHh
Confidence 56888999999999999999999865 556566543
No 81
>COG4531 ZnuA ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=38.84 E-value=84 Score=25.82 Aligned_cols=45 Identities=20% Similarity=0.195 Sum_probs=33.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhCCC----CeEEEecchHHHHHHHh
Q 046266 52 SESLNSASKFHNQLLEQEILQNFNNESKR----PVIFTLDLYGAFMSALM 97 (174)
Q Consensus 52 ~~~~~~~~~~~N~~L~~~l~~~l~~~~~~----~~i~~~D~~~~~~~i~~ 97 (174)
.+.+..-.+.||.+|...- +++.+++.- --++|-|.|+.|++-..
T Consensus 179 ~a~y~aNlk~f~~~La~~d-~~i~~~L~pvk~Kpf~VFHDAY~YFE~~yg 227 (318)
T COG4531 179 AAKYDANLKDFEAQLAALD-KKVGEELAPVKGKPFFVFHDAYGYFENAYG 227 (318)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHhcccCCCCeEEEechHHHHHHhhC
Confidence 3455566788999998877 777766643 35889999999987543
No 82
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=38.10 E-value=44 Score=23.62 Aligned_cols=52 Identities=15% Similarity=0.064 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEe
Q 046266 10 IGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTL 86 (174)
Q Consensus 10 v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~ 86 (174)
+..+.+.+++|.+.|+++|+|.- .+.... ..| ..|.+.+ +.++ ++..+|.+.
T Consensus 55 ~p~~~eaL~~l~~~G~~~V~V~P--------l~l~~G-------------~e~-~di~~~v-~~~~--~~~~~i~~g 106 (127)
T cd03412 55 VDTPEEALAKLAADGYTEVIVQS--------LHIIPG-------------EEY-EKLKREV-DAFK--KGFKKIKLG 106 (127)
T ss_pred CCCHHHHHHHHHHCCCCEEEEEe--------CeeECc-------------HHH-HHHHHHH-HHHh--CCCceEEEc
Confidence 45688899999999999999953 333321 123 4556666 6665 466666664
No 83
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=37.90 E-value=62 Score=23.22 Aligned_cols=26 Identities=19% Similarity=0.244 Sum_probs=22.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhC
Q 046266 52 SESLNSASKFHNQLLEQEILQNFNNES 78 (174)
Q Consensus 52 ~~~~~~~~~~~N~~L~~~l~~~l~~~~ 78 (174)
.+..+.++..||+.|+..| .++.+++
T Consensus 70 e~q~e~lt~rF~~aL~~~L-~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASL-QAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhC
Confidence 4567789999999999999 9998765
No 84
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=36.86 E-value=1.6e+02 Score=21.06 Aligned_cols=38 Identities=16% Similarity=0.137 Sum_probs=25.1
Q ss_pred HHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHH
Q 046266 13 LAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFH 62 (174)
Q Consensus 13 i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~ 62 (174)
+.+.+++|.+.|+++|+|+-+ .+.. .|.+.+.++-..+
T Consensus 79 ~~~~l~~l~~~G~~~i~v~p~-------gF~~-----D~~Etl~di~~e~ 116 (135)
T cd00419 79 TDDALEELAKEGVKNVVVVPI-------GFVS-----DHLETLYELDIEY 116 (135)
T ss_pred HHHHHHHHHHcCCCeEEEECC-------cccc-----ccHHHHHHHHHHH
Confidence 456788889999999988532 2333 4677666655444
No 85
>PF07555 NAGidase: beta-N-acetylglucosaminidase ; InterPro: IPR011496 This family consists of both eukaryotic and prokaryotic hyaluronidases. Human Q9HAR0 from SWISSPROT is expressed during meningioma []. Clostridium perfringens, P26831 from SWISSPROT, is involved in pathogenesis and is likely to act on connectivity tissue during gas gangrene []. It catalyses the random hydrolysis of 1->4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate.; PDB: 2WB5_B 2V5C_B 2VUR_A 2V5D_A 2YDS_A 2CBI_A 2XPK_A 2CBJ_B 2J62_A 2X0Y_A ....
Probab=36.64 E-value=49 Score=27.38 Aligned_cols=25 Identities=24% Similarity=0.376 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCeEEEe
Q 046266 7 KSIIGQLAMNLKLILDLGVPKIAVT 31 (174)
Q Consensus 7 ~~~v~~i~~~v~~L~~~Gar~~~v~ 31 (174)
+.-++.+.+-+++|+++|+|.|.|+
T Consensus 87 ~~d~~~L~~K~~ql~~lGvr~Fail 111 (306)
T PF07555_consen 87 EEDFEALKAKFDQLYDLGVRSFAIL 111 (306)
T ss_dssp HHHHHHHHHHHHHHHCTT--EEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 5678889999999999999999776
No 86
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.47 E-value=59 Score=27.97 Aligned_cols=46 Identities=20% Similarity=0.533 Sum_probs=31.7
Q ss_pred HHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEecch
Q 046266 20 ILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLDLY 89 (174)
Q Consensus 20 L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D~~ 89 (174)
+.+.|+.++ +-+-|.||.|.-... +.++ ..+++++|++++.-+|.-
T Consensus 328 ~i~~g~~nv--IclqPFGCmPnhI~~---------------------kgm~-k~lk~~~p~ani~aVd~d 373 (420)
T COG3581 328 LIESGVDNV--ICLQPFGCMPNHIVS---------------------KGMI-KGLKRDKPKANIAAVDYD 373 (420)
T ss_pred HHHcCCCce--EEecCccCCcHHHHH---------------------HHHH-HHHHhcCCCCceEEeecC
Confidence 556777665 456799999933221 2345 778888899888888764
No 87
>PF08351 DUF1726: Domain of unknown function (DUF1726); InterPro: IPR013562 This entry represents a protein of unknown function and is found towards the N terminus of putative ATPases (IPR007807 from INTERPRO). ; PDB: 2ZPA_B.
Probab=35.79 E-value=19 Score=24.16 Aligned_cols=47 Identities=13% Similarity=0.094 Sum_probs=24.9
Q ss_pred HCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHH
Q 046266 22 DLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEI 70 (174)
Q Consensus 22 ~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l 70 (174)
..|. .+|+-+||+...|.........-........+..|++++.+.+
T Consensus 36 ~gGG--llill~p~~~~w~~~~d~~~~~~~~~~~~~~~~~F~~rf~~~L 82 (92)
T PF08351_consen 36 RGGG--LLILLLPPWESWPQLPDPFSRRLSVPPYTDVTPRFIRRFIRSL 82 (92)
T ss_dssp -TT---EEEEEES-GGGTTTS-BGGGHHCC--SS-B--HHHHHHHHHHH
T ss_pred ecCe--EEEEEcCCHHHhhhcchHHHhccccCCCCcccHHHHHHHHHHH
Confidence 4466 7888889888777665432111122233367888999998877
No 88
>TIGR00109 hemH ferrochelatase. Human ferrochelatase, found at the mitochondrial inner membrane inner surface, was shown in an active recombinant form to be a homodimer. This contrasts to an earlier finding by gel filtration that overexpressed E. coli ferrochelatase runs as a monomer.
Probab=34.34 E-value=1.9e+02 Score=23.95 Aligned_cols=23 Identities=26% Similarity=0.343 Sum_probs=19.3
Q ss_pred HHHHHHHHHHCCCCeEEEecCCC
Q 046266 13 LAMNLKLILDLGVPKIAVTSMEP 35 (174)
Q Consensus 13 i~~~v~~L~~~Gar~~~v~nlpp 35 (174)
|.+.|++|.+.|+++++++=|-|
T Consensus 106 i~~~l~~l~~~G~~~iv~lPL~P 128 (322)
T TIGR00109 106 TEEAVKELLKDGVERAVVLPLYP 128 (322)
T ss_pred HHHHHHHHHhcCCCeEEEEeCCc
Confidence 56789999999999998877654
No 89
>PLN02541 uracil phosphoribosyltransferase
Probab=33.56 E-value=1.3e+02 Score=24.12 Aligned_cols=48 Identities=8% Similarity=0.203 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHCCCC--eEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEecc
Q 046266 11 GQLAMNLKLILDLGVP--KIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLDL 88 (174)
Q Consensus 11 ~~i~~~v~~L~~~Gar--~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D~ 88 (174)
..+...++.|.+.|++ +|.++++ +. + .+.+ +.+.+.||+++|+..-+
T Consensus 171 gS~~~ai~~L~~~Gv~~~~I~~v~~--ia-s---------------------------~~Gl-~~i~~~fP~v~I~ta~I 219 (244)
T PLN02541 171 GTIVAAIDELVSRGASVEQIRVVCA--VA-A---------------------------PPAL-KKLSEKFPGLHVYAGII 219 (244)
T ss_pred HHHHHHHHHHHHcCCCcccEEEEEE--EE-C---------------------------HHHH-HHHHHHCcCCEEEEEEE
Confidence 3567788999999997 8988886 11 1 2335 66777789999888655
Q ss_pred h
Q 046266 89 Y 89 (174)
Q Consensus 89 ~ 89 (174)
-
T Consensus 220 D 220 (244)
T PLN02541 220 D 220 (244)
T ss_pred C
Confidence 4
No 90
>PF11281 DUF3083: Protein of unknown function (DUF3083); InterPro: IPR021433 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=32.67 E-value=91 Score=25.77 Aligned_cols=56 Identities=11% Similarity=0.095 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCC--CCeEEEecchHHHHHHHhccccCCCCcccc
Q 046266 53 ESLNSASKFHNQLLEQEILQNFNNESK--RPVIFTLDLYGAFMSALMKKENHSGNVKLK 109 (174)
Q Consensus 53 ~~~~~~~~~~N~~L~~~l~~~l~~~~~--~~~i~~~D~~~~~~~i~~~~~~~p~~yGf~ 109 (174)
+++..-+..|..+..+.+ ..|..++| ...|.+=|---+..|+.+..+|+-++||++
T Consensus 82 ~diR~NsA~FH~kV~~~l-~~l~~~l~~~~~~iKiRDHQHLTYDlFAk~KG~kesygyK 139 (316)
T PF11281_consen 82 DDIRANSAKFHQKVQKVL-NDLQPQLPIKQLEIKIRDHQHLTYDLFAKAKGNKESYGYK 139 (316)
T ss_pred chhhhhHHHHHHHHHHHH-HHHHHhcCCCCCCceeccccccchhhhhhccCCcccccee
Confidence 345566888999999999 99998886 456888888777778877767778888875
No 91
>PF13377 Peripla_BP_3: Periplasmic binding protein-like domain; PDB: 3K9C_B 3BIL_B 3JVD_B 1ZAY_A 1VPW_A 1DBQ_A 2PUA_A 1QQA_A 1PNR_A 1JHZ_A ....
Probab=32.62 E-value=40 Score=23.75 Aligned_cols=16 Identities=19% Similarity=0.441 Sum_probs=13.8
Q ss_pred HHHHHHCCCCeEEEec
Q 046266 17 LKLILDLGVPKIAVTS 32 (174)
Q Consensus 17 v~~L~~~Gar~~~v~n 32 (174)
++.|++.|.|+|.+++
T Consensus 1 ~~~L~~~G~r~i~~i~ 16 (160)
T PF13377_consen 1 VDYLIERGHRRIAFIG 16 (160)
T ss_dssp HHHHHHTT-SSEEEEE
T ss_pred ChHHHHCCCCeEEEEe
Confidence 5789999999999999
No 92
>PRK09240 thiH thiamine biosynthesis protein ThiH; Reviewed
Probab=32.36 E-value=1.8e+02 Score=24.56 Aligned_cols=24 Identities=17% Similarity=0.219 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHCCCCeEEEec
Q 046266 9 IIGQLAMNLKLILDLGVPKIAVTS 32 (174)
Q Consensus 9 ~v~~i~~~v~~L~~~Gar~~~v~n 32 (174)
-.++|.+.++.+.+.|+++|.+++
T Consensus 105 s~eEI~~~a~~~~~~Gv~~i~lvg 128 (371)
T PRK09240 105 DEEEIEREMAAIKKLGFEHILLLT 128 (371)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEee
Confidence 346777888888999999996654
No 93
>PRK05481 lipoyl synthase; Provisional
Probab=32.18 E-value=2.8e+02 Score=22.53 Aligned_cols=24 Identities=13% Similarity=0.203 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHCCCCeEEEecC
Q 046266 10 IGQLAMNLKLILDLGVPKIAVTSM 33 (174)
Q Consensus 10 v~~i~~~v~~L~~~Gar~~~v~nl 33 (174)
.++|.+.++.+.+.|+|.|++.+.
T Consensus 82 ~eeI~~ea~~l~~~G~kEI~L~gg 105 (289)
T PRK05481 82 PDEPERVAEAVARMGLKYVVITSV 105 (289)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEe
Confidence 567788888999999999988853
No 94
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=31.86 E-value=64 Score=21.10 Aligned_cols=22 Identities=5% Similarity=0.290 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHCCCCeEEEecC
Q 046266 12 QLAMNLKLILDLGVPKIAVTSM 33 (174)
Q Consensus 12 ~i~~~v~~L~~~Gar~~~v~nl 33 (174)
.+.+.++.|.+.|.++++|+=+
T Consensus 46 ~i~~~l~~l~~~g~~~vvvvPl 67 (101)
T cd03409 46 DTEEAIRELAEEGYQRVVIVPL 67 (101)
T ss_pred CHHHHHHHHHHcCCCeEEEEeC
Confidence 3567889999999999988644
No 95
>COG0407 HemE Uroporphyrinogen-III decarboxylase [Coenzyme metabolism]
Probab=31.08 E-value=3.3e+02 Score=23.07 Aligned_cols=79 Identities=6% Similarity=-0.029 Sum_probs=51.2
Q ss_pred chHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeE
Q 046266 4 GLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVI 83 (174)
Q Consensus 4 ~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i 83 (174)
++++.+.+....-++...++||.-+.|++..--+.. ...+...+..|..++.+.+ .+.. ++..+
T Consensus 182 ~ll~kltd~~i~Yl~~qi~aGAdavqifDsW~g~l~------------~~~~~~f~~~~~~~i~~~v-k~~~---~~~pi 245 (352)
T COG0407 182 ALLDKLTDAVIEYLKAQIEAGADAVQIFDSWAGVLS------------MIDYDEFVLPYMKRIVREV-KEVK---GGVPV 245 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEeeccccccCC------------cccHHHHhhhHHHHHHHHH-HHhC---CCCcE
Confidence 456777777778888999999999999987422211 1235677788888887777 6554 44444
Q ss_pred EEe--cchHHHHHHHhc
Q 046266 84 FTL--DLYGAFMSALMK 98 (174)
Q Consensus 84 ~~~--D~~~~~~~i~~~ 98 (174)
++| +...++..+-+.
T Consensus 246 i~f~~ga~~~l~~m~~~ 262 (352)
T COG0407 246 IHFCKGAGHLLEDMAKT 262 (352)
T ss_pred EEECCCcHHHHHHHHhc
Confidence 444 444455555443
No 96
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=31.03 E-value=85 Score=22.02 Aligned_cols=26 Identities=23% Similarity=0.287 Sum_probs=22.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhC
Q 046266 52 SESLNSASKFHNQLLEQEILQNFNNES 78 (174)
Q Consensus 52 ~~~~~~~~~~~N~~L~~~l~~~l~~~~ 78 (174)
.++.+.++..||+.|...+ .++.+++
T Consensus 57 e~q~~~~~~rF~~~L~~~L-~~yq~~H 82 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAEL-QAWQAQH 82 (112)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhC
Confidence 4567789999999999999 9998875
No 97
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=30.46 E-value=67 Score=22.30 Aligned_cols=20 Identities=30% Similarity=0.436 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHCCCCeEEEe
Q 046266 12 QLAMNLKLILDLGVPKIAVT 31 (174)
Q Consensus 12 ~i~~~v~~L~~~Gar~~~v~ 31 (174)
.+.+.+++|.+.|+++++|+
T Consensus 47 ~l~~~l~~l~~~g~~~v~vv 66 (126)
T PRK00923 47 TIPEALKKLIGTGADKIIVV 66 (126)
T ss_pred CHHHHHHHHHHcCCCEEEEE
Confidence 47788999999999999885
No 98
>COG1182 AcpD Acyl carrier protein phosphodiesterase [Lipid metabolism]
Probab=29.96 E-value=70 Score=24.88 Aligned_cols=26 Identities=15% Similarity=0.318 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhhhCCCCeEEEecchH
Q 046266 64 QLLEQEILQNFNNESKRPVIFTLDLYG 90 (174)
Q Consensus 64 ~~L~~~l~~~l~~~~~~~~i~~~D~~~ 90 (174)
+....++ +.+++++|+.+|+..|++.
T Consensus 20 ~l~~~Fi-~~yk~~~P~dev~~~DL~~ 45 (202)
T COG1182 20 KLADEFI-ETYKEKHPNDEVIERDLAA 45 (202)
T ss_pred HHHHHHH-HHHHHhCCCCeEEEeeccc
Confidence 3445567 8999999999999999875
No 99
>PRK04326 methionine synthase; Provisional
Probab=29.64 E-value=1.9e+02 Score=23.60 Aligned_cols=35 Identities=9% Similarity=0.130 Sum_probs=28.3
Q ss_pred cchHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCc
Q 046266 3 PGLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGC 38 (174)
Q Consensus 3 ~~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~ 38 (174)
.+++..++..+...++.|.+.|++ ++.+.=|-+..
T Consensus 153 ~e~~~~l~~~~~~~i~~l~~~G~~-~iqidEP~l~~ 187 (330)
T PRK04326 153 EELVFDLAKVINEEIKNLVEAGAK-YIQIDEPALAT 187 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCC-EEEecCchhhc
Confidence 367788899999999999999996 66777676654
No 100
>TIGR02351 thiH thiazole biosynthesis protein ThiH. Members this protein family are the ThiH protein of thiamine biosynthesis, a homolog of the BioB protein of biotin biosynthesis. Genes for the this protein generally are found in operons with other thiamin biosynthesis genes.
Probab=29.54 E-value=1.8e+02 Score=24.39 Aligned_cols=23 Identities=13% Similarity=0.244 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHCCCCeEEEec
Q 046266 10 IGQLAMNLKLILDLGVPKIAVTS 32 (174)
Q Consensus 10 v~~i~~~v~~L~~~Gar~~~v~n 32 (174)
.+.|.+.++.+.+.|+++|.+++
T Consensus 105 ~eEI~~~a~~~~~~Gv~~i~lvg 127 (366)
T TIGR02351 105 EEEIEREIEAIKKSGFKEILLVT 127 (366)
T ss_pred HHHHHHHHHHHHhCCCCEEEEee
Confidence 56788888899999999998773
No 101
>PF00762 Ferrochelatase: Ferrochelatase; InterPro: IPR001015 Synonym(s): Protohaem ferro-lyase, Iron chelatase, etc. Ferrochelatase catalyses the last step in haem biosynthesis: the chelation of a ferrous ion to proto-porphyrin IX, to form protohaem [, ]. In eukaryotic cells, it binds to the mitochondrial inner membrane with its active site on the matrix side of the membrane. The X-ray structure of Bacillus subtilis and human ferrochelatase have been solved [, ]. The human enzyme exists as a homodimer. Each subunit contains one [2Fe-2S] cluster. The monomer is folded into two similar domains, each with a four-stranded parallel beta-sheet flanked by an alpha-helix in a beta-alpha-beta motif that is reminiscent of the fold found in the periplasmic binding proteins. The topological similarity between the domains suggests that they have arisen from a gene duplication event. However, significant differences exist between the two domains, including an N-terminal section (residues 80-130) that forms part of the active site pocket, and a C-terminal extension (residues 390-423) that is involved in coordination of the [2Fe-2S] cluster and in stabilisation of the homodimer. Ferrochelatase seems to have a structurally conserved core region that is common to the enzyme from bacteria, plants and mammals. Porphyrin binds in the identified cleft; this cleft also includes the metal-binding site of the enzyme. It is likely that the structure of the cleft region will have different conformations upon substrate binding and release [].; GO: 0004325 ferrochelatase activity, 0006783 heme biosynthetic process; PDB: 2QD3_B 2HRE_C 3HCN_B 2PNJ_A 2QD1_C 1HRK_A 2QD4_B 3AQI_B 2HRC_B 3HCO_B ....
Probab=29.13 E-value=3e+02 Score=22.67 Aligned_cols=78 Identities=15% Similarity=0.121 Sum_probs=42.4
Q ss_pred HHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHH------------------HHHHHHHHHHHHHHHH
Q 046266 13 LAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSA------------------SKFHNQLLEQEILQNF 74 (174)
Q Consensus 13 i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~------------------~~~~N~~L~~~l~~~l 74 (174)
|.+.|++|.+.|.++++|+-|-|.. ..... +.+.+.+.+. -..|.+.+.+.+ .+-
T Consensus 102 i~~~l~~l~~~g~~~ivvlPLyPqy-----S~~tt-gs~~~~~~~~~~~~~~~~~~~~i~~~~~~p~yi~a~~~~i-~~~ 174 (316)
T PF00762_consen 102 IEDALEELKADGVDRIVVLPLYPQY-----SSSTT-GSYLDEVERALKKSRPNPKVRFIPSFYDHPAYIEALAERI-REA 174 (316)
T ss_dssp HHHHHHHHHHTT-SEEEEEESSSS-------TTTH-HHHHHHHHHHHHHTHSSSEEEEE---TT-HHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHcCCCeEEEEeCCCch-----hHhhH-HHHHHHHHHHHHhcCCCCeEEEeCCccCCHHHHHHHHHHH-HHH
Confidence 5678899999999999998875543 22210 0112222211 123445555555 443
Q ss_pred hhhC--CCCeEEEecchHHHHHHHh
Q 046266 75 NNES--KRPVIFTLDLYGAFMSALM 97 (174)
Q Consensus 75 ~~~~--~~~~i~~~D~~~~~~~i~~ 97 (174)
-++. ++..-++|-.+++-...++
T Consensus 175 l~~~~~~~~~~llfSaHglP~~~~~ 199 (316)
T PF00762_consen 175 LERFPRGEPDHLLFSAHGLPQRYVE 199 (316)
T ss_dssp HTTS-HCCCEEEEEEEE--BHHHHT
T ss_pred HHhcCCCCCCEEEEccCCCCccccc
Confidence 3333 2347788899998888884
No 102
>PF12108 SF3a60_bindingd: Splicing factor SF3a60 binding domain; InterPro: IPR021966 This domain is found in eukaryotes. This domain is about 30 amino acids in length. This domain has a single completely conserved residue Y that may be functionally important. SF3a60 makes up the SF3a complex with SF3a66 and SF3a120. This domain is the binding site of SF3a60 for SF3a120. The SF3a complex is part of the spliceosome, a protein complex involved in splicing mRNA after transcription. ; PDB: 2DT7_A.
Probab=28.71 E-value=46 Score=17.34 Aligned_cols=13 Identities=46% Similarity=0.703 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHhC
Q 046266 162 FSELQSSLRIIRE 174 (174)
Q Consensus 162 A~~~~~~l~~~~~ 174 (174)
..++++.|++|||
T Consensus 9 f~eFY~rlk~Ike 21 (28)
T PF12108_consen 9 FSEFYERLKEIKE 21 (28)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4568888888885
No 103
>PF04026 SpoVG: SpoVG; InterPro: IPR007170 This is a stage V sporulation protein G. It is essential for sporulation and specific to stage V sporulation in Bacillus megaterium and Bacillus subtilis []. In B. subtilis, expression decreases after 30-60 minutes of cold shock [].; GO: 0030435 sporulation resulting in formation of a cellular spore; PDB: 2IA9_F 2I9X_B 2I9Z_A.
Probab=28.33 E-value=48 Score=21.93 Aligned_cols=26 Identities=12% Similarity=0.109 Sum_probs=21.9
Q ss_pred eecCCCCh-hHHHHHHHHHHHHHHHHH
Q 046266 146 FFWDNIHP-SQNGWHAVFSELQSSLRI 171 (174)
Q Consensus 146 lfwD~~HP-T~~~h~~iA~~~~~~l~~ 171 (174)
-|-|-.|| |..+.+.|-+.+.++.++
T Consensus 56 ~y~Di~~Pitke~Re~i~~aVl~aY~~ 82 (84)
T PF04026_consen 56 EYKDICHPITKEFREQIEEAVLDAYEE 82 (84)
T ss_dssp -EEESEEESSHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEECCHHHHHHHHHHHHHHHHh
Confidence 58899999 789999999999888765
No 104
>cd03312 CIMS_N_terminal_like CIMS - Cobalamine-independent methonine synthase, or MetE, N-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers the N-terminal barrel, and a few single-barrel sequences most similar to the N-terminal barrel. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Side chains fro
Probab=27.98 E-value=91 Score=26.25 Aligned_cols=35 Identities=11% Similarity=0.009 Sum_probs=28.1
Q ss_pred cchHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCc
Q 046266 3 PGLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMGC 38 (174)
Q Consensus 3 ~~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~ 38 (174)
.+++.+++..+.+.++.|+++|++. +=++=|.+..
T Consensus 174 ~el~~dla~~y~~el~~L~~aG~~~-IQiDEP~l~~ 208 (360)
T cd03312 174 LSLLDKLLPVYKELLKKLAAAGAEW-VQIDEPALVL 208 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCE-EEeeCChhhc
Confidence 4688899999999999999999974 5566565543
No 105
>PF04672 Methyltransf_19: S-adenosyl methyltransferase; InterPro: IPR006764 This is a family of uncharacterised proteins.; PDB: 3GIW_A 3GO4_A 2QE6_A.
Probab=27.47 E-value=1.1e+02 Score=24.81 Aligned_cols=22 Identities=9% Similarity=0.176 Sum_probs=13.8
Q ss_pred HHHHHHHHHHC-CCCeEEEecCC
Q 046266 13 LAMNLKLILDL-GVPKIAVTSME 34 (174)
Q Consensus 13 i~~~v~~L~~~-Gar~~~v~nlp 34 (174)
+...|+.|... |+|+|+=++..
T Consensus 56 l~RaVr~la~~~GIrQFLDlGsG 78 (267)
T PF04672_consen 56 LRRAVRYLAEEAGIRQFLDLGSG 78 (267)
T ss_dssp HHHHHHHHHCTT---EEEEET--
T ss_pred HHHHHHHHHHhcCcceEEEcccC
Confidence 56678888887 99999887754
No 106
>TIGR01371 met_syn_B12ind 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase. This model describes the cobalamin-independent methionine synthase. A family of uncharacterized archaeal proteins is homologous to the C-terminal region of this family. That family is excluded from this model but, along with this family, belongs to pfam model pfam01717.
Probab=27.34 E-value=2.2e+02 Score=26.65 Aligned_cols=34 Identities=9% Similarity=0.064 Sum_probs=28.5
Q ss_pred cchHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCC
Q 046266 3 PGLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMG 37 (174)
Q Consensus 3 ~~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg 37 (174)
.++..+++..+.+.|+.|+++|++ ++-++=|.+.
T Consensus 567 ~~~~~~la~a~~~ev~~L~~aG~~-~IQIDEPaL~ 600 (750)
T TIGR01371 567 KEIAYQIALAIRDEVLDLEEAGIK-IIQIDEPALR 600 (750)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC-EEEEeCchhh
Confidence 467889999999999999999996 6777777664
No 107
>PF08092 Toxin_22: Magi peptide toxin family ; InterPro: IPR012627 This family consists of Magi peptide toxins (Magi 1, 2 and 5) isolated from the venom of Hexathelidae spider. These insecticidal peptide toxins bind to sodium channels and induce flaccid paralysis when injected into lepidopteran larvae. However, these peptides are not toxic to mice when injected intracranially at 20 pmol/g.; GO: 0019871 sodium channel inhibitor activity, 0005576 extracellular region
Probab=27.22 E-value=27 Score=19.52 Aligned_cols=12 Identities=25% Similarity=0.744 Sum_probs=8.6
Q ss_pred ccCCCCCCceecC
Q 046266 137 IVCENPKLSFFWD 149 (174)
Q Consensus 137 ~~C~~~~~ylfwD 149 (174)
..|-.|..| ||=
T Consensus 18 leClkptgy-wWy 29 (38)
T PF08092_consen 18 LECLKPTGY-WWY 29 (38)
T ss_pred cEEeccEee-EEe
Confidence 467778888 663
No 108
>PLN02475 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
Probab=26.65 E-value=2.8e+02 Score=26.09 Aligned_cols=34 Identities=6% Similarity=-0.023 Sum_probs=27.3
Q ss_pred cchHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCC
Q 046266 3 PGLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPMG 37 (174)
Q Consensus 3 ~~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlpplg 37 (174)
.++..++...|.+.++.|+++|++. +=++=|.+.
T Consensus 578 ~e~~~~iA~alr~Ev~~L~~aG~~~-IQIDEPal~ 611 (766)
T PLN02475 578 HETCYQIALAIKDEVEDLEKAGITV-IQIDEAALR 611 (766)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCE-EEEeCcchh
Confidence 4678889999999999999999985 455556653
No 109
>TIGR00762 DegV EDD domain protein, DegV family. This family of proteins is related to DegV of Bacillus subtilis and includes paralogous sets in several species (B. subtilis, Deinococcus radiodurans, Mycoplasma pneumoniae) that are closer in percent identity to each than to most homologs from other species. This suggests both recent paralogy and diversity of function. DegV itself is encoded immediately downstream of DegU, a transcriptional regulator of degradation, but is itself uncharacterized. Crystallography suggested a lipid-binding site, while comparison of the crystal structure to dihydroxyacetone kinase and to a mannose transporter EIIA domain suggests a conserved domain, EDD, with phosphotransferase activity.
Probab=26.57 E-value=3e+02 Score=21.99 Aligned_cols=54 Identities=11% Similarity=0.108 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEecchH
Q 046266 11 GQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLDLYG 90 (174)
Q Consensus 11 ~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D~~~ 90 (174)
..+.+..++|.+.| .+|+++.+. +.++..||..... ++.+++.+|.++|...
T Consensus 65 ~~~~~~~~~l~~~~-~~vi~i~iS---------------------s~lSgty~~a~~a------a~~~~~~~i~ViDS~~ 116 (275)
T TIGR00762 65 GEFLELYEKLLEEG-DEVLSIHLS---------------------SGLSGTYQSARQA------AEMVDEAKVTVIDSKS 116 (275)
T ss_pred HHHHHHHHHHHhCC-CeEEEEEcC---------------------CchhHHHHHHHHH------HhhCCCCCEEEECChH
Confidence 55667777777777 567776652 1345556654322 1223556788888876
Q ss_pred HH
Q 046266 91 AF 92 (174)
Q Consensus 91 ~~ 92 (174)
..
T Consensus 117 ~s 118 (275)
T TIGR00762 117 AS 118 (275)
T ss_pred HH
Confidence 54
No 110
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=26.42 E-value=1.3e+02 Score=23.28 Aligned_cols=36 Identities=8% Similarity=0.111 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCeEEEecchHHH
Q 046266 56 NSASKFHNQLLEQEILQNFNNESKRPVIFTLDLYGAF 92 (174)
Q Consensus 56 ~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D~~~~~ 92 (174)
......|-+.|..++ +.+++..|+++|+++..+.++
T Consensus 123 ~~~~~~~~~~l~~~l-~~i~~~~p~a~I~~~gyp~~~ 158 (259)
T cd01823 123 DAALDEVGARLKAVL-DRIRERAPNARVVVVGYPRLF 158 (259)
T ss_pred HHHHHHHHHHHHHHH-HHHHhhCCCcEEEEecccccc
Confidence 345677888999999 999988899999988866554
No 111
>PRK12928 lipoyl synthase; Provisional
Probab=26.27 E-value=3.6e+02 Score=21.96 Aligned_cols=24 Identities=17% Similarity=0.198 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHCCCCeEEEecC
Q 046266 10 IGQLAMNLKLILDLGVPKIAVTSM 33 (174)
Q Consensus 10 v~~i~~~v~~L~~~Gar~~~v~nl 33 (174)
.+++.+.++.+...|+|.+++.+.
T Consensus 89 ~eei~~~a~~~~~~G~keivitg~ 112 (290)
T PRK12928 89 PDEPERVAEAVAALGLRYVVLTSV 112 (290)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEE
Confidence 466778888889999999888663
No 112
>cd01401 PncB_like Nicotinate phosphoribosyltransferase (NAPRTase), related to PncB. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products. This subgroup is present in bacteria, archea and funghi.
Probab=26.24 E-value=1.1e+02 Score=26.13 Aligned_cols=22 Identities=18% Similarity=0.258 Sum_probs=17.6
Q ss_pred HHHHHHhhhCCCC-eEEEecchHH
Q 046266 69 EILQNFNNESKRP-VIFTLDLYGA 91 (174)
Q Consensus 69 ~l~~~l~~~~~~~-~i~~~D~~~~ 91 (174)
.+ +.+.+.+|+. .|.+.|+|+.
T Consensus 237 A~-~~w~~~y~~~l~i~L~DTy~t 259 (377)
T cd01401 237 AL-ERWVREYGGDLGIALTDTFGT 259 (377)
T ss_pred HH-HHHHHHcCCCCeEEEEecCCC
Confidence 44 6777788876 7999999986
No 113
>COG1031 Uncharacterized Fe-S oxidoreductase [Energy production and conversion]
Probab=26.06 E-value=61 Score=28.62 Aligned_cols=21 Identities=14% Similarity=0.245 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHCCCCeEEE
Q 046266 10 IGQLAMNLKLILDLGVPKIAV 30 (174)
Q Consensus 10 v~~i~~~v~~L~~~Gar~~~v 30 (174)
.+.+.+.|+.||++|+|+|=+
T Consensus 217 ~e~Vv~EVkaLY~~GvrhFRl 237 (560)
T COG1031 217 PEDVVEEVKALYRAGVRHFRL 237 (560)
T ss_pred HHHHHHHHHHHHHhccceeee
Confidence 456778889999999999944
No 114
>PF03481 SUA5: Putative GTP-binding controlling metal-binding; InterPro: IPR005145 The function of this domain is unknown, it is found in P32579 from SWISSPROT and its relatives. It is found C-terminal to the IPR006070 from INTERPRO.; PDB: 2EQA_A 3AJE_A 4E1B_A 2YV4_A.
Probab=25.91 E-value=1.2e+02 Score=21.15 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=26.8
Q ss_pred chHHHHHHHHHHHHHHHHHCCCCeEEEecCCCC
Q 046266 4 GLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPM 36 (174)
Q Consensus 4 ~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlppl 36 (174)
.-...+..+++..++.+=+.|+..|++-.+|.-
T Consensus 78 ~d~~~~A~~Lf~~LR~~D~~~~~~I~ie~~~~~ 110 (125)
T PF03481_consen 78 GDPEEAARNLFAALRELDELGVDLILIEGPPET 110 (125)
T ss_dssp TSHHHHHHHHHHHHHHHHHTT-SEEEEEEESGC
T ss_pred CCHHHHHHHHHHHHHHHhhcCCCEEEEeeCCCc
Confidence 345678899999999999999999999887643
No 115
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=25.87 E-value=1.1e+02 Score=25.17 Aligned_cols=31 Identities=6% Similarity=0.189 Sum_probs=27.2
Q ss_pred chHHHHHHHHHHHHHHHHHCCCCeEEEecCC
Q 046266 4 GLTKSIIGQLAMNLKLILDLGVPKIAVTSME 34 (174)
Q Consensus 4 ~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlp 34 (174)
.+...+..+|...+..+.+.|+++++|++..
T Consensus 171 ~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G 201 (310)
T PF12048_consen 171 AYEERLFARIEAAIAFAQQQGGKNIVLIGHG 201 (310)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCceEEEEEeC
Confidence 4567889999999999999999999999874
No 116
>PF01717 Meth_synt_2: Cobalamin-independent synthase, Catalytic domain; InterPro: IPR002629 This is a domain of vitamin-B12 independent methionine synthases or 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferases, 2.1.1.14 from EC from bacteria and plants. Plants are the only higher eukaryotes that have the required enzymes for methionine synthesis []. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to homocysteine []. The aligned region makes up the carboxy region of the approximately 750 amino acid protein except in some hypothetical archaeal proteins present in the family, where this region corresponds to the entire length.; GO: 0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, 0009086 methionine biosynthetic process; PDB: 1U22_A 1U1H_A 1U1U_A 1U1J_A 3BQ5_A 3BQ6_A 1XDJ_B 1XR2_B 1T7L_B 1XPG_B ....
Probab=25.84 E-value=1e+02 Score=25.22 Aligned_cols=33 Identities=9% Similarity=0.166 Sum_probs=27.0
Q ss_pred cchHHHHHHHHHHHHHHHHHCCCCeEEEecCCCC
Q 046266 3 PGLTKSIIGQLAMNLKLILDLGVPKIAVTSMEPM 36 (174)
Q Consensus 3 ~~~v~~~v~~i~~~v~~L~~~Gar~~~v~nlppl 36 (174)
.+++..++..+...|+.|++.|++ ++-++=|-+
T Consensus 146 ~~~~~dla~a~~~ei~~l~~~G~~-~iQiDeP~l 178 (324)
T PF01717_consen 146 EELLEDLAEAYREEIRALYDAGCR-YIQIDEPAL 178 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-S-EEEEEETCH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCC-EEEecchHh
Confidence 468889999999999999999996 678887743
No 117
>PRK07360 FO synthase subunit 2; Reviewed
Probab=24.42 E-value=2.7e+02 Score=23.39 Aligned_cols=24 Identities=8% Similarity=0.224 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHCCCCeEEEec
Q 046266 9 IIGQLAMNLKLILDLGVPKIAVTS 32 (174)
Q Consensus 9 ~v~~i~~~v~~L~~~Gar~~~v~n 32 (174)
-.++|.+.++.+++.|++.|.+.+
T Consensus 92 s~eeI~~~a~~a~~~G~~~i~l~~ 115 (371)
T PRK07360 92 TIAEILEKAAEAVKRGATEVCIQG 115 (371)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcc
Confidence 457788889999999999998875
No 118
>PF12872 OST-HTH: OST-HTH/LOTUS domain; PDB: 2KPM_A 3S93_B 3RCO_A 2KZV_A.
Probab=23.97 E-value=1.5e+02 Score=18.22 Aligned_cols=29 Identities=3% Similarity=-0.091 Sum_probs=20.1
Q ss_pred eEEEecchHHHHHHHhccccCCCCccccccc
Q 046266 82 VIFTLDLYGAFMSALMKKENHSGNVKLKTSL 112 (174)
Q Consensus 82 ~i~~~D~~~~~~~i~~~~~~~p~~yGf~~~~ 112 (174)
.+.+-++...+...... =.|..|||....
T Consensus 23 ~v~ls~l~~~~~~~~~~--f~~~~yG~~~l~ 51 (74)
T PF12872_consen 23 WVSLSQLGQEYKKKYPD--FDPRDYGFSSLS 51 (74)
T ss_dssp SEEHHHHHHHHHHHHTT----TCCTTSSSHH
T ss_pred eEEHHHHHHHHHHHCCC--CCccccCCCcHH
Confidence 68888888888777711 128899997653
No 119
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=23.58 E-value=2.1e+02 Score=21.15 Aligned_cols=31 Identities=19% Similarity=0.285 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCeEEEecch
Q 046266 58 ASKFHNQLLEQEILQNFNNESKRPVIFTLDLY 89 (174)
Q Consensus 58 ~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D~~ 89 (174)
..+.|-+.|.+++ +.++++.|+..|+++..+
T Consensus 100 ~~~~~~~~l~~~i-~~ir~~~p~~~Ivv~~~~ 130 (204)
T cd04506 100 AEETYQNNLKKIF-KEIRKLNPDAPIFLVGLY 130 (204)
T ss_pred HHHHHHHHHHHHH-HHHHHHCCCCeEEEEecC
Confidence 4567888999999 999998999999887654
No 120
>TIGR00106 uncharacterized protein, MTH1187 family. This protein has been crystallized in both Methanobacterium thermoautotrophicum and yeast, but its function remains unknown. Both crystal structures showed sulfate ions bound at the interface of two dimers to form a tetramer.
Probab=23.45 E-value=2e+02 Score=19.45 Aligned_cols=25 Identities=8% Similarity=0.207 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCeEEE
Q 046266 6 TKSIIGQLAMNLKLILDLGVPKIAV 30 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~Gar~~~v 30 (174)
++.++.-+.+..+.+.+.|+.+++.
T Consensus 48 ~dev~~~i~~~~e~~~~~G~~Rv~t 72 (97)
T TIGR00106 48 LDELFEAIKAIHEAVLEKGSDRVYT 72 (97)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 5778888888889999999987743
No 121
>PF01910 DUF77: Domain of unknown function DUF77; InterPro: IPR002767 This entry contains several hypothetical proteins of unknown function found in archaebacteria, eukaryotes and eubacteria. The structures of YBL001c from Saccharomyces cerevisiae and its homologue MTH1187 from the archaea Methanobacterium thermoautotrophicum have been determined []. These proteins have a ferredoxin-like alpha/beta sandwich structure with anti-parallel beta-sheets. Generally, they have two domains that form a single beta-sheet dimer, where two dimers pack sheet-to-sheet into a tetramer, some proteins having an extra C-terminal helix. ; PDB: 1LXJ_A 1YQH_A 2EKY_G 2EPI_A 1VK8_D 2IBO_C 1LXN_B.
Probab=23.27 E-value=1.8e+02 Score=19.34 Aligned_cols=25 Identities=4% Similarity=0.274 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCCeEEE
Q 046266 6 TKSIIGQLAMNLKLILDLGVPKIAV 30 (174)
Q Consensus 6 v~~~v~~i~~~v~~L~~~Gar~~~v 30 (174)
.+.++.-+.+..+.+.+.|+.+++.
T Consensus 46 ~dev~~~i~~~~e~~~~~G~~Rv~t 70 (92)
T PF01910_consen 46 LDEVMALIKEAHEALFEAGAKRVVT 70 (92)
T ss_dssp HHHHHHHHHHHHHHHHCTTSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 6788888899999999999988743
No 122
>TIGR00677 fadh2_euk methylenetetrahydrofolate reductase, eukaryotic type. This protein is an FAD-containing flavoprotein.
Probab=23.17 E-value=1.1e+02 Score=24.79 Aligned_cols=22 Identities=14% Similarity=0.135 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHCCCCeEEEec
Q 046266 11 GQLAMNLKLILDLGVPKIAVTS 32 (174)
Q Consensus 11 ~~i~~~v~~L~~~Gar~~~v~n 32 (174)
..+.+.+..+.++|+|+++++.
T Consensus 74 ~~l~~~L~~~~~~Gi~niLal~ 95 (281)
T TIGR00677 74 EMIDDALERAYSNGIQNILALR 95 (281)
T ss_pred HHHHHHHHHHHHCCCCEEEEEC
Confidence 3688889999999999997664
No 123
>PF04690 YABBY: YABBY protein; InterPro: IPR006780 YABBY proteins are a group of plant-specific transcription factors involved in the specification of abaxial polarity in lateral organs such as leaves and floral organs [, ].
Probab=23.07 E-value=1.7e+02 Score=22.12 Aligned_cols=42 Identities=19% Similarity=0.192 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCeEEEecchHHHHHHHhccccCCC
Q 046266 57 SASKFHNQLLEQEILQNFNNESKRPVIFTLDLYGAFMSALMKKENHSG 104 (174)
Q Consensus 57 ~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D~~~~~~~i~~~~~~~p~ 104 (174)
..-.+||.-+++.+ ..+++.+|+. .--..|...-+||+..|.
T Consensus 124 R~psaYn~f~k~ei-~rik~~~p~i-----shkeaFs~aAknW~h~ph 165 (170)
T PF04690_consen 124 RVPSAYNRFMKEEI-QRIKAENPDI-----SHKEAFSAAAKNWAHFPH 165 (170)
T ss_pred CCchhHHHHHHHHH-HHHHhcCCCC-----CHHHHHHHHHHhhhhCcc
Confidence 45678999999999 9999999875 345666777777766664
No 124
>PF06230 DUF1009: Protein of unknown function (DUF1009); InterPro: IPR010415 This is a family of uncharacterised bacterial proteins.
Probab=23.02 E-value=2.1e+02 Score=22.40 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=46.5
Q ss_pred HHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHH----HHHHHHHHHHHHHHHHHhhhCCCCeEEEecchH
Q 046266 15 MNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNS----ASKFHNQLLEQEILQNFNNESKRPVIFTLDLYG 90 (174)
Q Consensus 15 ~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~----~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D~~~ 90 (174)
..++.|.+.|++++++.+- + .-|.+............+-. +...=+..|+..+ +.|. ...|.+++...
T Consensus 3 ~~i~~lk~~gv~~vvmaG~--v-~rp~~~~~~~D~~~~~~l~~~~~~l~~gDd~lL~av~-~~le----~~G~~vv~~~~ 74 (214)
T PF06230_consen 3 KIIKFLKREGVTRVVMAGK--V-KRPIFSDLRPDWRALKLLPRLLKALDRGDDALLRAVI-DELE----KEGFKVVGAHE 74 (214)
T ss_pred HHHHHHHHcCCCEEEEeec--c-cCccccccCCCHHHHHHHHHHHHHHhcCCHHHHHHHH-HHHH----HCCCEEEcHHH
Confidence 5678899999999999874 3 45666543322122222332 2222233455555 5554 34577889999
Q ss_pred HHHHHHhc
Q 046266 91 AFMSALMK 98 (174)
Q Consensus 91 ~~~~i~~~ 98 (174)
+..+++..
T Consensus 75 ~~p~Ll~~ 82 (214)
T PF06230_consen 75 YLPDLLAP 82 (214)
T ss_pred hhHHhcCC
Confidence 99999886
No 125
>PF02645 DegV: Uncharacterised protein, DegV family COG1307; InterPro: IPR003797 This family of proteins is related to DegV of Bacillus subtilis and includes paralogous sets in several species (B. subtilis, Deinococcus radiodurans, Mycoplasma pneumoniae) that are closer in percent identity to each other than to most homologs from other species. This suggests both recent paralogy and diversity of function.; PDB: 2DT8_A 3LUP_A 3NYI_B 3PL5_A 1PZX_B 1MGP_A 1VPV_B 3FYS_A 3EGL_C 3JR7_A ....
Probab=23.01 E-value=2.9e+02 Score=22.12 Aligned_cols=26 Identities=19% Similarity=0.355 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHCCCCeEEEecCC
Q 046266 9 IIGQLAMNLKLILDLGVPKIAVTSME 34 (174)
Q Consensus 9 ~v~~i~~~v~~L~~~Gar~~~v~nlp 34 (174)
....+.+..+++...|..+++++.+.
T Consensus 64 s~~~~~~~f~~~~~~gyd~ii~i~iS 89 (280)
T PF02645_consen 64 SPGEFEEAFEKLLEEGYDEIIVITIS 89 (280)
T ss_dssp -HHHHHHHHHHHHHTTTSEEEEEES-
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 45678888889999999999988763
No 126
>cd05015 SIS_PGI_1 Phosphoglucose isomerase (PGI) contains two SIS (Sugar ISomerase) domains. This classification is based on the alignment of the first SIS domain. PGI is a multifunctional enzyme which as an intracellular dimer catalyzes the reversible isomerization of glucose 6-phosphate to fructose 6-phosphate. As an extracellular protein, PGI also has functions equivalent to neuroleukin (NLK), autocrine motility factor (AMF), and maturation factor (MF). Evidence suggests that PGI, NLK, AMF, and MF are closely related or identical. NLK is a neurotrophic growth factor that promotes regeneration and survival of neurons. The dimeric form of NLK has isomerase function, whereas its monomeric form carries out neurotrophic activity. AMF is a cytokine that stimulates cell migration and metastasis. MF mediates the differentiation of human myeloid leukemic HL-60 cells to terminal monocytic cells.
Probab=22.95 E-value=1.4e+02 Score=21.71 Aligned_cols=29 Identities=3% Similarity=0.050 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHH-CCCCeEEEecCCCC
Q 046266 8 SIIGQLAMNLKLILD-LGVPKIAVTSMEPM 36 (174)
Q Consensus 8 ~~v~~i~~~v~~L~~-~Gar~~~v~nlppl 36 (174)
..+.++.+.++++.+ .++++|+++++.--
T Consensus 2 ~~~~~i~~~~~~i~~~~~~~~iv~~GiGGS 31 (158)
T cd05015 2 AELERIKEFAEKVRSGKKITDVVVIGIGGS 31 (158)
T ss_pred hHHHHHHHHHHHHhcCCCCCEEEEEecCcc
Confidence 356778888888877 58999999998743
No 127
>TIGR00125 cyt_tran_rel cytidyltransferase-related domain. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown. Many of these proteins are known to use CTP or ATP and release pyrophosphate.
Probab=22.73 E-value=95 Score=18.48 Aligned_cols=20 Identities=15% Similarity=0.295 Sum_probs=15.5
Q ss_pred ecCCCChhHHHHHHHHHHHHHHH
Q 046266 147 FWDNIHPSQNGWHAVFSELQSSL 169 (174)
Q Consensus 147 fwD~~HPT~~~h~~iA~~~~~~l 169 (174)
-||.+| .||..+++...+..
T Consensus 7 ~Fdp~H---~GH~~~l~~a~~~~ 26 (66)
T TIGR00125 7 TFDPFH---LGHLDLLERAKELF 26 (66)
T ss_pred ccCCCC---HHHHHHHHHHHHhC
Confidence 389999 69999998876543
No 128
>PRK13555 azoreductase; Provisional
Probab=22.49 E-value=1.2e+02 Score=23.31 Aligned_cols=29 Identities=14% Similarity=0.267 Sum_probs=21.2
Q ss_pred HHHHHHH-HHHHHHhhhCCCCeEEEecchHH
Q 046266 62 HNQLLEQ-EILQNFNNESKRPVIFTLDLYGA 91 (174)
Q Consensus 62 ~N~~L~~-~l~~~l~~~~~~~~i~~~D~~~~ 91 (174)
|+.+|.+ .+ +.+++++|+..|.+.|+|..
T Consensus 18 ~s~~la~~f~-~~~~~~~p~~~V~~~DL~~~ 47 (208)
T PRK13555 18 VSSKMYETFV-STYKEANPNTEITELDLFAL 47 (208)
T ss_pred HHHHHHHHHH-HHHHHhCCCCeEEEEECCCC
Confidence 4555543 34 77888889999999998874
No 129
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=22.28 E-value=1.5e+02 Score=26.17 Aligned_cols=61 Identities=13% Similarity=0.176 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEecc--
Q 046266 11 GQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLDL-- 88 (174)
Q Consensus 11 ~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D~-- 88 (174)
.++.+.++.|.+.|++-+ +++. +..|+..+.+++ +.+++++|+..|+--|+
T Consensus 226 ~~~~~~a~~Lv~aGvd~i-~~D~-------------------------a~~~~~~~~~~i-~~ik~~~p~~~v~agnv~t 278 (479)
T PRK07807 226 GDVAAKARALLEAGVDVL-VVDT-------------------------AHGHQEKMLEAL-RAVRALDPGVPIVAGNVVT 278 (479)
T ss_pred hhHHHHHHHHHHhCCCEE-EEec-------------------------cCCccHHHHHHH-HHHHHHCCCCeEEeeccCC
Confidence 456778888888888753 4332 223467778888 99999999988777454
Q ss_pred hHHHHHHHhc
Q 046266 89 YGAFMSALMK 98 (174)
Q Consensus 89 ~~~~~~i~~~ 98 (174)
+.-..++++.
T Consensus 279 ~~~a~~l~~a 288 (479)
T PRK07807 279 AEGTRDLVEA 288 (479)
T ss_pred HHHHHHHHHc
Confidence 5555666654
No 130
>PF09677 TrbI_Ftype: Type-F conjugative transfer system protein (TrbI_Ftype); InterPro: IPR014115 This entry represents TrbI, an essential component of the F-type conjugative transfer system for plasmid DNA transfer that has been shown to be localized to the periplasm [, ].
Probab=22.28 E-value=1.5e+02 Score=20.64 Aligned_cols=26 Identities=19% Similarity=0.332 Sum_probs=21.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhC
Q 046266 52 SESLNSASKFHNQLLEQEILQNFNNES 78 (174)
Q Consensus 52 ~~~~~~~~~~~N~~L~~~l~~~l~~~~ 78 (174)
.+..+..++.||+.|...+ .++.+++
T Consensus 56 ~~q~~a~t~~F~~aL~~~L-~~~~~~h 81 (111)
T PF09677_consen 56 PEQVEALTQRFMQALEASL-AEYQAEH 81 (111)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHcC
Confidence 4566788999999999999 9988753
No 131
>KOG4175 consensus Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=22.22 E-value=89 Score=24.59 Aligned_cols=25 Identities=8% Similarity=0.239 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHCCCCeEEEecCCCC
Q 046266 12 QLAMNLKLILDLGVPKIAVTSMEPM 36 (174)
Q Consensus 12 ~i~~~v~~L~~~Gar~~~v~nlppl 36 (174)
...+.|+...++||--|+|+++||-
T Consensus 111 G~e~~iq~ak~aGanGfiivDlPpE 135 (268)
T KOG4175|consen 111 GVENYIQVAKNAGANGFIIVDLPPE 135 (268)
T ss_pred hHHHHHHHHHhcCCCceEeccCChH
Confidence 3456788889999999999999974
No 132
>PRK05321 nicotinate phosphoribosyltransferase; Provisional
Probab=22.22 E-value=1.5e+02 Score=25.54 Aligned_cols=24 Identities=17% Similarity=0.145 Sum_probs=18.3
Q ss_pred HHHHHHhhhCCCC-eEEEecchHHHH
Q 046266 69 EILQNFNNESKRP-VIFTLDLYGAFM 93 (174)
Q Consensus 69 ~l~~~l~~~~~~~-~i~~~D~~~~~~ 93 (174)
.+ +.+.+.+|+. .|.++|+|+...
T Consensus 240 Af-~~~~~~y~~~l~i~L~DTy~t~~ 264 (400)
T PRK05321 240 AL-EDWVREYRGDLGIALTDTIGMDA 264 (400)
T ss_pred HH-HHHHHHcCCCCeEEEEecCCcHH
Confidence 44 6777788876 799999998643
No 133
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=22.01 E-value=3.7e+02 Score=21.08 Aligned_cols=22 Identities=27% Similarity=0.406 Sum_probs=16.9
Q ss_pred HHHHHHCCCCeEEEecCCCCCc
Q 046266 17 LKLILDLGVPKIAVTSMEPMGC 38 (174)
Q Consensus 17 v~~L~~~Gar~~~v~nlpplg~ 38 (174)
++.+.+.|+++|+|++.-|.+.
T Consensus 165 ~~~a~~~g~~~iivv~t~~~~~ 186 (266)
T cd07208 165 VDKAIEDGADKIVVILTRPRGY 186 (266)
T ss_pred HHHHHHcCCCeEEEEecCCCCC
Confidence 4456788999999998776554
No 134
>PF00571 CBS: CBS domain CBS domain web page. Mutations in the CBS domain of Swiss:P35520 lead to homocystinuria.; InterPro: IPR000644 CBS (cystathionine-beta-synthase) domains are small intracellular modules, mostly found in two or four copies within a protein, that occur in a variety of proteins in bacteria, archaea, and eukaryotes [, ]. Tandem pairs of CBS domains can act as binding domains for adenosine derivatives and may regulate the activity of attached enzymatic or other domains []. In some cases, CBS domains may act as sensors of cellular energy status by being activated by AMP and inhibited by ATP []. In chloride ion channels, the CBS domains have been implicated in intracellular targeting and trafficking, as well as in protein-protein interactions, but results vary with different channels: in the CLC-5 channel, the CBS domain was shown to be required for trafficking [], while in the CLC-1 channel, the CBS domain was shown to be critical for channel function, but not necessary for trafficking []. Recent experiments revealing that CBS domains can bind adenosine-containing ligands such ATP, AMP, or S-adenosylmethionine have led to the hypothesis that CBS domains function as sensors of intracellular metabolites [, ]. Crystallographic studies of CBS domains have shown that pairs of CBS sequences form a globular domain where each CBS unit adopts a beta-alpha-beta-beta-alpha pattern []. Crystal structure of the CBS domains of the AMP-activated protein kinase in complexes with AMP and ATP shows that the phosphate groups of AMP/ATP lie in a surface pocket at the interface of two CBS domains, which is lined with basic residues, many of which are associated with disease-causing mutations []. In humans, mutations in conserved residues within CBS domains cause a variety of human hereditary diseases, including (with the gene mutated in parentheses): homocystinuria (cystathionine beta-synthase); Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase); retinitis pigmentosa (IMP dehydrogenase-1); congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members).; GO: 0005515 protein binding; PDB: 3JTF_A 3TE5_C 3TDH_C 3T4N_C 2QLV_C 3OI8_A 3LV9_A 2QH1_B 1PVM_B 3LQN_A ....
Probab=21.63 E-value=1.3e+02 Score=17.11 Aligned_cols=22 Identities=18% Similarity=0.388 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHCCCCeEEEecC
Q 046266 12 QLAMNLKLILDLGVPKIAVTSM 33 (174)
Q Consensus 12 ~i~~~v~~L~~~Gar~~~v~nl 33 (174)
.+.+.++.+.+.|.+.++|.|=
T Consensus 17 ~l~~~~~~~~~~~~~~~~V~d~ 38 (57)
T PF00571_consen 17 SLEEALEIMRKNGISRLPVVDE 38 (57)
T ss_dssp BHHHHHHHHHHHTSSEEEEEST
T ss_pred cHHHHHHHHHHcCCcEEEEEec
Confidence 3567788889999999999873
No 135
>TIGR00510 lipA lipoate synthase. The family shows strong sequence conservation.
Probab=21.62 E-value=4.6e+02 Score=21.55 Aligned_cols=23 Identities=26% Similarity=0.335 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHCCCCeEEEecC
Q 046266 11 GQLAMNLKLILDLGVPKIAVTSM 33 (174)
Q Consensus 11 ~~i~~~v~~L~~~Gar~~~v~nl 33 (174)
+++.+.++.+.+.|++.|++.+.
T Consensus 94 eei~~~a~~~~~~GlkevvLTsv 116 (302)
T TIGR00510 94 EEPAKLAETIKDMGLKYVVITSV 116 (302)
T ss_pred HHHHHHHHHHHHCCCCEEEEEee
Confidence 56778888899999999988864
No 136
>PRK09432 metF 5,10-methylenetetrahydrofolate reductase; Provisional
Probab=21.06 E-value=1.3e+02 Score=24.64 Aligned_cols=22 Identities=18% Similarity=0.149 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHCCCCeEEEec
Q 046266 11 GQLAMNLKLILDLGVPKIAVTS 32 (174)
Q Consensus 11 ~~i~~~v~~L~~~Gar~~~v~n 32 (174)
..+.+.+..+.++|+|+|+++.
T Consensus 97 ~~l~~~L~~~~~~GI~niLaLr 118 (296)
T PRK09432 97 DELRTIAKDYWNNGIRHIVALR 118 (296)
T ss_pred HHHHHHHHHHHHCCCCEEEEeC
Confidence 4677888899999999998875
No 137
>COG3854 SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown]
Probab=21.03 E-value=1.5e+02 Score=24.04 Aligned_cols=85 Identities=14% Similarity=0.082 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHCCCCeEEEecCCCCCcccccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHhhhCCCCeEEEec
Q 046266 8 SIIGQLAMNLKLILDLGVPKIAVTSMEPMGCLPQLSAVSSYENCSESLNSASKFHNQLLEQEILQNFNNESKRPVIFTLD 87 (174)
Q Consensus 8 ~~v~~i~~~v~~L~~~Gar~~~v~nlpplg~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~~l~~~~~~~~i~~~D 87 (174)
+++..+...++.||+.|--|.++++-|..|.|-..+.. ...++..+| ++...++.++|
T Consensus 120 ~v~Gt~~~li~~ly~~g~lntLiigpP~~GKTTlLRdi---------aR~~s~g~~-------------~~l~kkv~IiD 177 (308)
T COG3854 120 QVFGTANPLIKDLYQNGWLNTLIIGPPQVGKTTLLRDI---------ARLLSDGIN-------------QFLPKKVGIID 177 (308)
T ss_pred hhhccchHHHHHHHhcCceeeEEecCCCCChHHHHHHH---------HHHhhcccc-------------ccCCceEEEEe
Confidence 44555556889999999999999999988876533321 001111122 33567888999
Q ss_pred chHHHHHHHhccccCCCC-ccc-ccccccccc
Q 046266 88 LYGAFMSALMKKENHSGN-VKL-KTSLQPCCA 117 (174)
Q Consensus 88 ~~~~~~~i~~~~~~~p~~-yGf-~~~~~aCc~ 117 (174)
..+-...-+. ++|+. .|- .++.++|..
T Consensus 178 ersEIag~~~---gvpq~~~g~R~dVld~cpk 206 (308)
T COG3854 178 ERSEIAGCLN---GVPQHGRGRRMDVLDPCPK 206 (308)
T ss_pred ccchhhcccc---CCchhhhhhhhhhcccchH
Confidence 8765554322 33542 333 467788864
No 138
>cd00537 MTHFR Methylenetetrahydrofolate reductase (MTHFR). 5,10-Methylenetetrahydrofolate is reduced to 5-methyltetrahydrofolate by methylenetetrahydrofolate reductase, a cytoplasmic, NAD(P)-dependent enzyme. 5-methyltetrahydrofolate is utilized by methionine synthase to convert homocysteine to methionine. The enzymatic mechanism is a ping-pong bi-bi mechanism, in which NAD(P)+ release precedes the binding of methylenetetrahydrofolate and the acceptor is free FAD. The family includes the 5,10-methylenetetrahydrofolate reductase EC:1.7.99.5 from prokaryotes and methylenetetrahydrofolate reductase EC: 1.5.1.20 from eukaryotes. The bacterial enzyme is a homotetramer and NADH is the preferred reductant while the eukaryotic enzyme is a homodimer and NADPH is the preferred reductant. In humans, there are several clinically significant mutations in MTHFR that result in hyperhomocysteinemia, which is a risk factor for the development of cardiovascular disease.
Probab=20.42 E-value=1.4e+02 Score=23.87 Aligned_cols=25 Identities=24% Similarity=0.149 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHCCCCeEEEe-cCCC
Q 046266 11 GQLAMNLKLILDLGVPKIAVT-SMEP 35 (174)
Q Consensus 11 ~~i~~~v~~L~~~Gar~~~v~-nlpp 35 (174)
..+.+.+..+.++|+++++++ |=||
T Consensus 73 ~~l~~~L~~~~~~Gi~~iL~l~GD~~ 98 (274)
T cd00537 73 IELQSILLGAHALGIRNILALRGDPP 98 (274)
T ss_pred HHHHHHHHHHHHCCCCeEEEeCCCCC
Confidence 578889999999999999998 5444
No 139
>PRK08444 hypothetical protein; Provisional
Probab=20.40 E-value=4.2e+02 Score=22.25 Aligned_cols=24 Identities=13% Similarity=0.167 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHCCCCeEEEec
Q 046266 9 IIGQLAMNLKLILDLGVPKIAVTS 32 (174)
Q Consensus 9 ~v~~i~~~v~~L~~~Gar~~~v~n 32 (174)
-.++|.+.++...+.|++.|.+.+
T Consensus 81 s~eeI~~~a~~a~~~G~~ei~iv~ 104 (353)
T PRK08444 81 SHEEILEIVKNSVKRGIKEVHIVS 104 (353)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEec
Confidence 457788889999999999998775
Done!