BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046270
(590 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 116/297 (39%), Positives = 175/297 (58%), Gaps = 10/297 (3%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDE-DFTNE 310
K F + EL+ A++ FS N++G+G G VYKG L G LVAVK++ + +G E F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 311 VEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNI-SISHKRKQLTWPQ 369
VE+IS HRNLL LRG C+T + R LVY YM NG+++ + + L WP+
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTE-----RLLVYPYMANGSVASCLRERPESQPPLDWPK 140
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
R++I + A+G+AYLH P I HRD+K+ NILLD E A V DFGLAK H+
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 200
Query: 430 TRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLD---TSTSPFQLITDWA 486
V GT G++APEY G+ +EK+DV+ +G+++LEL++G++ D + ++ DW
Sbjct: 201 XAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 487 WVLAKSGKVDDIFDEFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLEGD 543
L K K++ + D ++ +E+ + V +LC RP +++ ++MLEGD
Sbjct: 261 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 174/297 (58%), Gaps = 10/297 (3%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDE-DFTNE 310
K F + EL+ A++ F N++G+G G VYKG L G LVAVK++ + T+G E F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 311 VEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNI-SISHKRKQLTWPQ 369
VE+IS HRNLL LRG C+T + R LVY YM NG+++ + + L WP+
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTE-----RLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
R++I + A+G+AYLH P I HRD+K+ NILLD E A V DFGLAK H+
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 192
Query: 430 TRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLD---TSTSPFQLITDWA 486
V G G++APEY G+ +EK+DV+ +G+++LEL++G++ D + ++ DW
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 487 WVLAKSGKVDDIFDEFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLEGD 543
L K K++ + D ++ +E+ + V +LC RP +++ ++MLEGD
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 163/292 (55%), Gaps = 21/292 (7%)
Query: 258 ELEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI 317
+LE+ATN F LIG G G VYKG LR G VA+K+ ++G E+F E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISH-KRKQLTWPQRKKIIVD 376
RH +L+SL G C ++ L+Y YM NG L ++ S ++W QR +I +
Sbjct: 93 RHPHLVSLIGFCDERNEM-----ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE-GHSHLTTRVAGT 435
A+G+ YLH I HRD+KS NILLD K+ DFG++K+ E G +HL V GT
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 436 FGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLIT--DWAWVLAKSG 493
GY+ PEY + G+LTEKSDVYSFG+V+ E++ R + S P +++ +WA +G
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL-PREMVNLAEWAVESHNNG 263
Query: 494 KVDDIFD----EFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLE 541
+++ I D + IR E R +F + C + RP++ D L LE
Sbjct: 264 QLEQIVDPNLADKIRPESLR----KFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 162/292 (55%), Gaps = 21/292 (7%)
Query: 258 ELEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI 317
+LE+ATN F LIG G G VYKG LR G VA+K+ ++G E+F E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISH-KRKQLTWPQRKKIIVD 376
RH +L+SL G C ++ L+Y YM NG L ++ S ++W QR +I +
Sbjct: 93 RHPHLVSLIGFCDERNEM-----ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE-GHSHLTTRVAGT 435
A+G+ YLH I HRD+KS NILLD K+ DFG++K+ E +HL V GT
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 436 FGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLIT--DWAWVLAKSG 493
GY+ PEY + G+LTEKSDVYSFG+V+ E++ R + S P +++ +WA +G
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL-PREMVNLAEWAVESHNNG 263
Query: 494 KVDDIFD----EFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLE 541
+++ I D + IR E R +F + C + RP++ D L LE
Sbjct: 264 QLEQIVDPNLADKIRPESLR----KFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 160/299 (53%), Gaps = 22/299 (7%)
Query: 254 FHVSELEQATNGFSQN------NLIGQGASGIVYKGTLRHGNLVAVKQI---LDLDTKG- 303
F EL+ TN F + N +G+G G+VYKG + + VAVK++ +D+ T+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 304 DEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK 363
+ F E+++++K +H NL+ L G DD LVY YMPNG+L D +S
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLC-----LVYVYMPNGSLLDRLSCLDGTP 128
Query: 364 QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE 423
L+W R KI A GI +LH HRDIKS NILLD AK++DFGLA+ S +
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 424 -GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
+ + +R+ GT Y+APE AL G++T KSD+YSFG+V+LE+++G +D P L+
Sbjct: 186 FAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
Query: 483 TDWAWVLAKSGKVDDIFDEFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLE 541
+ + ++D D+ + + +V E V C H RP I ++L+
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSV-EAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 159/299 (53%), Gaps = 22/299 (7%)
Query: 254 FHVSELEQATNGFSQN------NLIGQGASGIVYKGTLRHGNLVAVKQI---LDLDTKG- 303
F EL+ TN F + N +G+G G+VYKG + + VAVK++ +D+ T+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 304 DEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK 363
+ F E+++++K +H NL+ L G DD LVY YMPNG+L D +S
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLC-----LVYVYMPNGSLLDRLSCLDGTP 128
Query: 364 QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE 423
L+W R KI A GI +LH HRDIKS NILLD AK++DFGLA+ S +
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 424 -GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
+ + R+ GT Y+APE AL G++T KSD+YSFG+V+LE+++G +D P L+
Sbjct: 186 FAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
Query: 483 TDWAWVLAKSGKVDDIFDEFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLE 541
+ + ++D D+ + + +V E V C H RP I ++L+
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSV-EAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 158/299 (52%), Gaps = 22/299 (7%)
Query: 254 FHVSELEQATNGFSQN------NLIGQGASGIVYKGTLRHGNLVAVKQI---LDLDTKG- 303
F EL+ TN F + N +G+G G+VYKG + + VAVK++ +D+ T+
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 304 DEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK 363
+ F E+++++K +H NL+ L G DD LVY YMPNG+L D +S
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLC-----LVYVYMPNGSLLDRLSCLDGTP 122
Query: 364 QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE 423
L+W R KI A GI +LH HRDIKS NILLD AK++DFGLA+ S +
Sbjct: 123 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 179
Query: 424 -GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
+ R+ GT Y+APE AL G++T KSD+YSFG+V+LE+++G +D P L+
Sbjct: 180 FAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 238
Query: 483 TDWAWVLAKSGKVDDIFDEFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLE 541
+ + ++D D+ + + +V E V C H RP I ++L+
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKMNDADSTSV-EAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 153/299 (51%), Gaps = 22/299 (7%)
Query: 254 FHVSELEQATNGFSQN------NLIGQGASGIVYKGTLRHGNLVAVKQI---LDLDTKG- 303
F EL+ TN F + N G+G G+VYKG + + VAVK++ +D+ T+
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 304 DEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK 363
+ F E+++ +K +H NL+ L G DD LVY Y PNG+L D +S
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLC-----LVYVYXPNGSLLDRLSCLDGTP 119
Query: 364 QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE 423
L+W R KI A GI +LH HRDIKS NILLD AK++DFGLA+ S +
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 424 -GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
+R+ GT Y APE AL G++T KSD+YSFG+V+LE+++G +D P L+
Sbjct: 177 FAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 235
Query: 483 TDWAWVLAKSGKVDDIFDEFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLE 541
+ + ++D D+ + +V E V C H RP I ++L+
Sbjct: 236 DIKEEIEDEEKTIEDYIDKKXNDADSTSV-EAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 112/199 (56%), Gaps = 12/199 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDE--DFTNEVEIISKIRHRNLLSLRGCC 329
IG G+ G V++ HG+ VAVK +++ D + +F EV I+ ++RH N++ G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
+ S +V +Y+ G+L + S R+QL +R + DVAKG+ YLH
Sbjct: 104 TQPPNLS-----IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRN 157
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR-VAGTFGYLAPEYALYGQ 448
P I HRD+KS N+L+D + KV DFGL++ L+ L ++ AGT ++APE
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSR--LKASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 449 LTEKSDVYSFGIVILELMS 467
EKSDVYSFG+++ EL +
Sbjct: 216 SNEKSDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 114/199 (57%), Gaps = 12/199 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDE--DFTNEVEIISKIRHRNLLSLRGCC 329
IG G+ G V++ HG+ VAVK +++ D + +F EV I+ ++RH N++ G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
+ S +V +Y+ G+L + S R+QL +R + DVAKG+ YLH
Sbjct: 104 TQPPNLS-----IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRN 157
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR-VAGTFGYLAPEYALYGQ 448
P I HR++KS N+L+D + KV DFGL++ L+ + L+++ AGT ++APE
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSR--LKASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 449 LTEKSDVYSFGIVILELMS 467
EKSDVYSFG+++ EL +
Sbjct: 216 SNEKSDVYSFGVILWELAT 234
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ KIRH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKIRHEKLVQL--YAVV 82
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 71
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 72 SEEPI----YIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 123
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 181
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 182 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 223
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 75
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 76 SEEPI----YIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVE---RMN 127
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 185
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 186 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 227
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 73
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 74 SEEPI----YIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 125
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 183
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 184 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 225
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVIEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVIEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEXTARQGAKFPIKWTAPEAALYGRF 192
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVCEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G L D + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVMEYMSKGCLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 79
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 80 SEEPI----YIVTEYMNKGSLLDFLK-GETGKYLRLPQLVDMSAQIASGMAYVE---RMN 131
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEWTARQGAKFPIKWTAPEAALYGRF 189
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 231
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 249 SEEPI----YIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVE---RMN 300
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 400
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 79
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 80 SEEPI----YIVTEYMNKGSLLDFLK-GETGKYLRLPQLVDMSAQIASGMAYVE---RMN 131
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 189
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 231
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 249 SEEPI----YIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVE---RMN 300
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 400
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G L D + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVTEYMSKGCLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 72
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ +V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 73 SEEPI----XIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVE---RMN 124
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEXTARQGAKFPIKWTAPEAALYGRF 182
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 183 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 224
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA--VV 82
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 83 SEEPI----YIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+ + NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 249 SEEPI----YIVGEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVE---RMN 300
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 400
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L T E F E +++ K+RH L+ L V
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 331
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 332 SEEPI----YIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVE---RMN 383
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGLA+ L + T R F + APE ALYG+
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 441
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 442 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 483
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 111/222 (50%), Gaps = 25/222 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+GQG G V+ GT VA+K L E F E +++ K+RH L+ L V
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIK-TLKPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAVV 249
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + K L PQ + +A G+AY+ +
Sbjct: 250 SEEPI----YIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 301
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L KVADFGL + L + T R F + APE ALYG+
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGR--LIEDNEYTARQGAKFPIKWTAPEAALYGRF 359
Query: 450 TEKSDVYSFGIVILEL----------MSGRKVLDTSTSPFQL 481
T KSDV+SFGI++ EL M R+VLD +++
Sbjct: 360 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 401
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 46/266 (17%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGD-------EDFTNEVEI 313
A N IG+G G+V+KG L + ++VA+K ++ D++G+ ++F EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 314 ISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKI 373
+S + H N++ L G +V +++P G L + K + W + ++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR-------MVMEFVPCGDLYHRLL--DKAHPIKWSVKLRL 127
Query: 374 IVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS-----ELNAKVADFGLAKQSLEGHSHL 428
++D+A GI Y+ P I HRD++S NI L S + AKVADFGL++QS+ H
Sbjct: 128 MLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV----HS 182
Query: 429 TTRVAGTFGYLAPEY--ALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWA 486
+ + G F ++APE A TEK+D YSF +++ +++G D +
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS---------- 232
Query: 487 WVLAKSGKVDDIFDEFIRAEGARAVM 512
GK+ F IR EG R +
Sbjct: 233 -----YGKIK--FINMIREEGLRPTI 251
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 107/202 (52%), Gaps = 15/202 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ GT VA+K L T E F E +I+ K++H L+ L V
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIK-TLKPGTMSPESFLEEAQIMKKLKHDKLVQL--YAVV 73
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S++ ++V +YM G+L D + R L P + VA G+AY+ +
Sbjct: 74 SEEPI----YIVTEYMNKGSLLDFLKDGEGRA-LKLPNLVDMAAQVAAGMAYIE---RMN 125
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD++S NIL+ + L K+ADFGLA+ L + T R F + APE ALYG+
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLAR--LIEDNEXTARQGAKFPIKWTAPEAALYGRF 183
Query: 450 TEKSDVYSFGIVILELMSGRKV 471
T KSDV+SFGI++ EL++ +V
Sbjct: 184 TIKSDVWSFGILLTELVTKGRV 205
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 46/266 (17%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGD-------EDFTNEVEI 313
A N IG+G G+V+KG L + ++VA+K ++ D++G+ ++F EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 314 ISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKI 373
+S + H N++ L G +V +++P G L + K + W + ++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR-------MVMEFVPCGDLYHRLL--DKAHPIKWSVKLRL 127
Query: 374 IVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS-----ELNAKVADFGLAKQSLEGHSHL 428
++D+A GI Y+ P I HRD++S NI L S + AKVADFG ++QS+ H
Sbjct: 128 MLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSV----HS 182
Query: 429 TTRVAGTFGYLAPEY--ALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWA 486
+ + G F ++APE A TEK+D YSF +++ +++G D +
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS---------- 232
Query: 487 WVLAKSGKVDDIFDEFIRAEGARAVM 512
GK+ F IR EG R +
Sbjct: 233 -----YGKIK--FINMIREEGLRPTI 251
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 46/266 (17%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGD-------EDFTNEVEI 313
A N IG+G G+V+KG L + ++VA+K ++ D++G+ ++F EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 314 ISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKI 373
+S + H N++ L G +V +++P G L + K + W + ++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR-------MVMEFVPCGDLYHRLL--DKAHPIKWSVKLRL 127
Query: 374 IVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS-----ELNAKVADFGLAKQSLEGHSHL 428
++D+A GI Y+ P I HRD++S NI L S + AKVADF L++QS+ H
Sbjct: 128 MLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSV----HS 182
Query: 429 TTRVAGTFGYLAPEY--ALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWA 486
+ + G F ++APE A TEK+D YSF +++ +++G D +
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS---------- 232
Query: 487 WVLAKSGKVDDIFDEFIRAEGARAVM 512
GK+ F IR EG R +
Sbjct: 233 -----YGKIK--FINMIREEGLRPTI 251
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
IG G G+V+ G + + VA+K I + +EDF E E++ K+ H L+ L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
LV+++M +G LSD + +R + +DV +G+AYL +
Sbjct: 74 QAPIC-----LVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLE---EAS 123
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE 451
+ HRD+ + N L+ KV+DFG+ + L+ +T + +PE + + +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 452 KSDVYSFGIVILELMSGRKVLDTSTSPFQLITD 484
KSDV+SFG+++ E+ S K+ + S +++ D
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 216
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
IG G G+V+ G + + VA+K I + +EDF E E++ K+ H L+ L G C+
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
LV+++M +G LSD + +R + +DV +G+AYL +
Sbjct: 72 QAPIC-----LVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLE---EAC 121
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE 451
+ HRD+ + N L+ KV+DFG+ + L+ +T + +PE + + +
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 181
Query: 452 KSDVYSFGIVILELMSGRKVLDTSTSPFQLITD 484
KSDV+SFG+++ E+ S K+ + S +++ D
Sbjct: 182 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 214
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
IG G G+V+ G + + VA+K I + +EDF E E++ K+ H L+ L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
LV+++M +G LSD + +R + +DV +G+AYL +
Sbjct: 74 QAPIC-----LVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLE---EAC 123
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE 451
+ HRD+ + N L+ KV+DFG+ + L+ +T + +PE + + +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 452 KSDVYSFGIVILELMSGRKVLDTSTSPFQLITD 484
KSDV+SFG+++ E+ S K+ + S +++ D
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 216
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
IG G G+V+ G + + VA+K I + +EDF E E++ K+ H L+ L G C+
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
LV+++M +G LSD + +R + +DV +G+AYL +
Sbjct: 77 QAPIC-----LVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLE---EAC 126
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE 451
+ HRD+ + N L+ KV+DFG+ + L+ +T + +PE + + +
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 186
Query: 452 KSDVYSFGIVILELMSGRKVLDTSTSPFQLITD 484
KSDV+SFG+++ E+ S K+ + S +++ D
Sbjct: 187 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 219
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 18/195 (9%)
Query: 288 GNLVAVKQI-LDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDY 346
G +VAVK + D + + E++I+ + H +++ +GCC +D K LV +Y
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCC---EDQGEKSLQLVMEY 99
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + R + Q + +G+AYLH HR++ + N+LLD+
Sbjct: 100 VPLGSLRDYLP----RHSIGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDN 152
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAG---TFGYLAPEYALYGQLTEKSDVYSFGIVIL 463
+ K+ DFGLAK EGH + R G F Y APE + SDV+SFG+ +
Sbjct: 153 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLY 211
Query: 464 ELMSGRKVLDTSTSP 478
EL++ D+S SP
Sbjct: 212 ELLTH---CDSSQSP 223
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 18/195 (9%)
Query: 288 GNLVAVKQI-LDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDY 346
G +VAVK + D + + E++I+ + H +++ +GCC +D K LV +Y
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCC---EDQGEKSLQLVMEY 99
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + R + Q + +G+AYLH HR++ + N+LLD+
Sbjct: 100 VPLGSLRDYLP----RHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDN 152
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAG---TFGYLAPEYALYGQLTEKSDVYSFGIVIL 463
+ K+ DFGLAK EGH + R G F Y APE + SDV+SFG+ +
Sbjct: 153 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLY 211
Query: 464 ELMSGRKVLDTSTSP 478
EL++ D+S SP
Sbjct: 212 ELLTH---CDSSQSP 223
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 109/213 (51%), Gaps = 11/213 (5%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
IG G G+V+ G + + VA+K I + + ++DF E E++ K+ H L+ L G C+
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE-GSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
LV+++M +G LSD + +R + +DV +G+AYL +
Sbjct: 94 QAPIC-----LVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLE---EAC 143
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE 451
+ HRD+ + N L+ KV+DFG+ + L+ +T + +PE + + +
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 203
Query: 452 KSDVYSFGIVILELMSGRKVLDTSTSPFQLITD 484
KSDV+SFG+++ E+ S K+ + S +++ D
Sbjct: 204 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 236
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 288 GNLVAVKQI-LDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDY 346
G +VAVK + D + + E++I+ + H +++ +GCC +D+ LV +Y
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCC---EDAGAASLQLVMEY 116
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + R + Q + +G+AYLH HRD+ + N+LLD+
Sbjct: 117 VPLGSLRDYLP----RHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDN 169
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAG---TFGYLAPEYALYGQLTEKSDVYSFGIVIL 463
+ K+ DFGLAK EGH R G F Y APE + SDV+SFG+ +
Sbjct: 170 DRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLY 228
Query: 464 ELMSGRKVLDTSTSP 478
EL++ D+S SP
Sbjct: 229 ELLTH---CDSSQSP 240
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 105/202 (51%), Gaps = 17/202 (8%)
Query: 272 IGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCV 330
IG G+ G VYKG HG++ V + +++D + + F NEV ++ K RH N+L G +
Sbjct: 44 IGSGSFGTVYKGKW-HGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG-YM 101
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
T D+ + +V + +L ++ + + Q+ Q I A+G+ YLH
Sbjct: 102 TKDNLA-----IVTQWCEGSSLYKHLHVQETKFQMF--QLIDIARQTAQGMDYLH---AK 151
Query: 391 GIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEGHSHLTTRVAGTFGYLAPEYALY--- 446
I HRD+KS NI L L K+ DFGLA +S S + G+ ++APE
Sbjct: 152 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 447 GQLTEKSDVYSFGIVILELMSG 468
+ +SDVYS+GIV+ ELM+G
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTG 233
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 11/213 (5%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
IG G G+V+ G + + VA+K I + +EDF E E++ K+ H L+ L G C+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
LV ++M +G LSD + +R + +DV +G+AYL +
Sbjct: 75 QAPIC-----LVTEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLE---EAC 124
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE 451
+ HRD+ + N L+ KV+DFG+ + L+ +T + +PE + + +
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 452 KSDVYSFGIVILELMSGRKVLDTSTSPFQLITD 484
KSDV+SFG+++ E+ S K+ + S +++ D
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 217
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 108/205 (52%), Gaps = 21/205 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G VYKG HG+ VAVK +L++ + F NEV ++ K RH N+L G
Sbjct: 16 IGSGSFGTVYKGKW-HGD-VAVK-MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
S+ + +V + +L ++ I + ++ + I A+G+ YLH
Sbjct: 73 ------STAPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH--- 121
Query: 389 KPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEGHSHLTTRVAGTFGYLAPEYALY- 446
I HRD+KS NI L +L K+ DFGLA +S SH +++G+ ++APE
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 447 --GQLTEKSDVYSFGIVILELMSGR 469
+ +SDVY+FGIV+ ELM+G+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 100/225 (44%), Gaps = 25/225 (11%)
Query: 268 QNNLIGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLR 326
++G+G G K T R G ++ +K+++ D + F EV+++ + H N+L
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 327 GCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHY 386
G KR + +Y+ GTL I Q W QR D+A G+AYLH
Sbjct: 74 GVLYKD-----KRLNFITEYIKGGTLRG--IIKSMDSQYPWSQRVSFAKDIASGMAYLH- 125
Query: 387 GLKPGIYHRDIKSTNILLDSELNAKVADFGLA------KQSLEGHSHLTT-------RVA 433
I HRD+ S N L+ N VADFGLA K EG L V
Sbjct: 126 --SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 434 GTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSP 478
G ++APE EK DV+SFGIV+ E++ GR D P
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLP 227
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 109/205 (53%), Gaps = 21/205 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G VYKG HG+ VAVK +L++ + F NEV ++ K RH N+L G
Sbjct: 16 IGSGSFGTVYKGKW-HGD-VAVK-MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
S+ + +V + +L ++ I + ++ + I A+G+ YLH
Sbjct: 73 ------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH--- 121
Query: 389 KPGIYHRDIKSTNILLDSELNAKVADFGLA-KQSLEGHSHLTTRVAGTFGYLAPEYALY- 446
I HRD+KS NI L +L K+ DFGLA ++S SH +++G+ ++APE
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 447 --GQLTEKSDVYSFGIVILELMSGR 469
+ +SDVY+FGIV+ ELM+G+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 94 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 144
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHS---HLTTRVAGTFG 437
+ YL HRD+ + N +LD + KVADFGLA+ + H T
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 108/205 (52%), Gaps = 21/205 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G VYKG HG+ VAVK +L++ + F NEV ++ K RH N+L G
Sbjct: 16 IGSGSFGTVYKGKW-HGD-VAVK-MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
S+ + +V + +L ++ I + ++ + I A+G+ YLH
Sbjct: 73 ------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH--- 121
Query: 389 KPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEGHSHLTTRVAGTFGYLAPEYALY- 446
I HRD+KS NI L +L K+ DFGLA +S SH +++G+ ++APE
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 447 --GQLTEKSDVYSFGIVILELMSGR 469
+ +SDVY+FGIV+ ELM+G+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 119/267 (44%), Gaps = 28/267 (10%)
Query: 255 HVSELEQ-ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTN 309
H+S+ Q A F +G+G G VY + + ++L L+ G +
Sbjct: 3 HMSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
EVEI S +RH N+L L G R +L+ +Y P GT+ + K + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQR 114
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
I ++A ++Y H + HRDIK N+LL S K+ADFG S+ S
Sbjct: 115 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRR 168
Query: 430 TRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVL 489
T + GT YL PE EK D++S G++ E + G+ + +T +
Sbjct: 169 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETY 220
Query: 490 AKSGKVDDIFDEFIRAEGARAVMERFV 516
+ +V+ F +F+ EGAR ++ R +
Sbjct: 221 KRISRVEFTFPDFV-TEGARDLISRLL 246
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 96 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 146
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH---SHLTTRVAGTFG 437
+ +L HRD+ + N +LD + KVADFGLA+ L+ H T
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 109/205 (53%), Gaps = 21/205 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G VYKG HG+ VAVK +L++ + F NEV ++ K RH N+L G
Sbjct: 36 IGSGSFGTVYKGKW-HGD-VAVK-MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
S+ + +V + +L ++ I + ++ + I A+G+ YLH
Sbjct: 93 ------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH--- 141
Query: 389 KPGIYHRDIKSTNILLDSELNAKVADFGLA-KQSLEGHSHLTTRVAGTFGYLAPEYALY- 446
I HRD+KS NI L +L K+ DFGLA ++S SH +++G+ ++APE
Sbjct: 142 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 447 --GQLTEKSDVYSFGIVILELMSGR 469
+ +SDVY+FGIV+ ELM+G+
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 66 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITEL 117
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S T + GT
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTELCGTLD 171
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 223
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 224 TFPDFV-TEGARDLISRLL 241
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 87 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 137
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT---FG 437
+ YL HRD+ + N +LD + KVADFGLA+ + + G
Sbjct: 138 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 114 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 164
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT---FG 437
+ YL HRD+ + N +LD + KVADFGLA+ + + G
Sbjct: 165 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 221
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 93 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 143
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT---FG 437
+ YL HRD+ + N +LD + KVADFGLA+ + + G
Sbjct: 144 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 92 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 142
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT---FG 437
+ YL HRD+ + N +LD + KVADFGLA+ + + G
Sbjct: 143 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 199
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 95 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 145
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT---FG 437
+ YL HRD+ + N +LD + KVADFGLA+ + + G
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 95 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 145
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT---FG 437
+ YL HRD+ + N +LD + KVADFGLA+ + + G
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 108/205 (52%), Gaps = 21/205 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G VYKG HG+ VAVK +L++ + F NEV ++ K RH N+L G
Sbjct: 21 IGSGSFGTVYKGKW-HGD-VAVK-MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
S+ + +V + +L ++ I + ++ + I A+G+ YLH
Sbjct: 78 ------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH--- 126
Query: 389 KPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEGHSHLTTRVAGTFGYLAPEYALY- 446
I HRD+KS NI L +L K+ DFGLA +S SH +++G+ ++APE
Sbjct: 127 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 447 --GQLTEKSDVYSFGIVILELMSGR 469
+ +SDVY+FGIV+ ELM+G+
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 92 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITEL 143
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S T + GT
Sbjct: 144 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLD 197
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 249
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 250 TFPDFV-TEGARDLISRLL 267
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 108/205 (52%), Gaps = 21/205 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G VYKG HG+ VAVK +L++ + F NEV ++ K RH N+L G
Sbjct: 18 IGSGSFGTVYKGKW-HGD-VAVK-MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
S+ + +V + +L ++ I + ++ + I A+G+ YLH
Sbjct: 75 ------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH--- 123
Query: 389 KPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEGHSHLTTRVAGTFGYLAPEYALY- 446
I HRD+KS NI L +L K+ DFGLA +S SH +++G+ ++APE
Sbjct: 124 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 447 --GQLTEKSDVYSFGIVILELMSGR 469
+ +SDVY+FGIV+ ELM+G+
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 94 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 144
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT---FG 437
+ YL HRD+ + N +LD + KVADFGLA+ + + G
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 90 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 140
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT---FG 437
+ YL HRD+ + N +LD + KVADFGLA+ + + G
Sbjct: 141 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 113 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 163
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT---FG 437
+ YL HRD+ + N +LD + KVADFGLA+ + + G
Sbjct: 164 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 220
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ +Y
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEY 94
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + HK + + + + + KG+ YL G K I HRD+ + NIL+++
Sbjct: 95 LPYGSLRDYLQ-KHKER-IDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVEN 149
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT---FGYLAPEYALYGQLTEKSDVYSFGIVIL 463
E K+ DFGL K + + G F Y APE + + SDV+SFG+V+
Sbjct: 150 ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLY 208
Query: 464 ELMSGRKVLDTSTSP 478
EL + ++ S SP
Sbjct: 209 ELFT---YIEKSKSP 220
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 108/205 (52%), Gaps = 21/205 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G VYKG HG+ VAVK +L++ + F NEV ++ K RH N+L G
Sbjct: 21 IGSGSFGTVYKGKW-HGD-VAVK-MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
S+ + +V + +L ++ I + ++ + I A+G+ YLH
Sbjct: 78 ------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH--- 126
Query: 389 KPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEGHSHLTTRVAGTFGYLAPEYALY- 446
I HRD+KS NI L +L K+ DFGLA +S SH +++G+ ++APE
Sbjct: 127 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 447 --GQLTEKSDVYSFGIVILELMSGR 469
+ +SDVY+FGIV+ ELM+G+
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 109/205 (53%), Gaps = 21/205 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G VYKG HG+ VAVK +L++ + F NEV ++ K RH N+L G
Sbjct: 44 IGSGSFGTVYKGKW-HGD-VAVK-MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
S+ + +V + +L ++ I + ++ + I A+G+ YLH
Sbjct: 101 ------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH--- 149
Query: 389 KPGIYHRDIKSTNILLDSELNAKVADFGLA-KQSLEGHSHLTTRVAGTFGYLAPEYALY- 446
I HRD+KS NI L +L K+ DFGLA ++S SH +++G+ ++APE
Sbjct: 150 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 447 --GQLTEKSDVYSFGIVILELMSGR 469
+ +SDVY+FGIV+ ELM+G+
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 288 GNLVAVKQILD-LDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDY 346
G +VAVK + + + + E+EI+ + H +++ +GCC +D K LV +Y
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCC---EDQGEKSVQLVMEY 93
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + R + Q + +G+AYLH HR + + N+LLD+
Sbjct: 94 VPLGSLRDYLP----RHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDN 146
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAG---TFGYLAPEYALYGQLTEKSDVYSFGIVIL 463
+ K+ DFGLAK EGH + R G F Y APE + SDV+SFG+ +
Sbjct: 147 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLY 205
Query: 464 ELMSGRKVLDTSTSPFQLITD 484
EL++ D++ SP T+
Sbjct: 206 ELLT---YCDSNQSPHTKFTE 223
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 66 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITEL 117
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S T + GT
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLD 171
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 223
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 224 TFPDFV-TEGARDLISRLL 241
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 117/264 (44%), Gaps = 27/264 (10%)
Query: 257 SELEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVE 312
S+ + A F +G+G G VY + + ++L L+ G + EVE
Sbjct: 5 SKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 64
Query: 313 IISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKK 372
I S +RH N+L L G R +L+ +Y P GT+ + K + +
Sbjct: 65 IQSHLRHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTAT 116
Query: 373 IIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRV 432
I ++A ++Y H + HRDIK N+LL S K+ADFG S+ S T +
Sbjct: 117 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTL 170
Query: 433 AGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKS 492
GT YL PE EK D++S G++ E + G+ + +T + +
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRI 222
Query: 493 GKVDDIFDEFIRAEGARAVMERFV 516
+V+ F +F+ EGAR ++ R +
Sbjct: 223 SRVEFTFPDFV-TEGARDLISRLL 245
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 288 GNLVAVKQILD-LDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDY 346
G +VAVK + + + + E+EI+ + H +++ +GCC +D K LV +Y
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCC---EDQGEKSVQLVMEY 94
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + R + Q + +G+AYLH HR + + N+LLD+
Sbjct: 95 VPLGSLRDYLP----RHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDN 147
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAG---TFGYLAPEYALYGQLTEKSDVYSFGIVIL 463
+ K+ DFGLAK EGH + R G F Y APE + SDV+SFG+ +
Sbjct: 148 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLY 206
Query: 464 ELMSGRKVLDTSTSPFQLITD 484
EL++ D++ SP T+
Sbjct: 207 ELLT---YCDSNQSPHTKFTE 224
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 111/209 (53%), Gaps = 29/209 (13%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G VYKG HG+ VAVK +L++ + F NEV ++ K RH N+L G
Sbjct: 32 IGSGSFGTVYKGKW-HGD-VAVK-MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK----GIAYL 384
S+ + +V + +L ++ S + ++ K ++D+A+ G+ YL
Sbjct: 89 ------STAPQLAIVTQWCEGSSLYHHLHASETKFEM------KKLIDIARQTARGMDYL 136
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLA-KQSLEGHSHLTTRVAGTFGYLAPEY 443
H I HRD+KS NI L + K+ DFGLA ++S SH +++G+ ++APE
Sbjct: 137 H---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 193
Query: 444 ALY---GQLTEKSDVYSFGIVILELMSGR 469
+ +SDVY+FGIV+ ELM+G+
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 25/227 (11%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 324 SLRGCCVTSDDSSGKRRFLVY-----DYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
LR SSG+++ +VY DY+P S ++ L K + +
Sbjct: 77 RLRYFFY----SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTFG 437
+ +AY+H GI HRDIK N+LLD + K+ DFG AKQ + G +++ + +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY- 187
Query: 438 YLAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 188 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 69 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITEL 120
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S T + GT
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLD 174
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 226
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 227 TFPDFV-TEGARDLISRLL 244
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 17/224 (7%)
Query: 265 GFSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNL 322
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 75
Query: 323 LSLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
+ LR +S + + LV DY+P S ++ L K + + + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLA 440
AY+H GI HRDIK N+LLD + K+ DFG AKQ + G +++ + + Y A
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRA 190
Query: 441 PEYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
PE ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 191 PE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 71 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITEL 122
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S T + GT
Sbjct: 123 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLD 176
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 228
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 229 TFPDFV-TEGARDLISRLL 246
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ +Y
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEY 98
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + HK + + + + + KG+ YL G K I HRD+ + NIL+++
Sbjct: 99 LPYGSLRDYLQ-KHKER-IDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVEN 153
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT---FGYLAPEYALYGQLTEKSDVYSFGIVIL 463
E K+ DFGL K + + G F Y APE + + SDV+SFG+V+
Sbjct: 154 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLY 212
Query: 464 ELMSGRKVLDTSTSP 478
EL + ++ S SP
Sbjct: 213 ELFT---YIEKSKSP 224
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 18/220 (8%)
Query: 269 NNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGC 328
++G+GA G+V K R + VA+KQI + + F E+ +S++ H N++ L G
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 70
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
C+ LV +Y G+L + + + T + ++G+AYLH
Sbjct: 71 CLNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 123
Query: 389 KPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYG 447
+ HRD+K N+LL + K+ DFG A + +H+T G+ ++APE
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNN-KGSAAWMAPEVFEGS 179
Query: 448 QLTEKSDVYSFGIVILELMSGRKVLDTSTSP-FQLITDWA 486
+EK DV+S+GI++ E+++ RK D P F+++ WA
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WA 217
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 66 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 117
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S T + GT
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTDLCGTLD 171
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 223
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 224 TFPDFV-TEGARDLISRLL 241
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 83 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITEL 134
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S T + GT
Sbjct: 135 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLD 188
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ PF+ T + + +V+
Sbjct: 189 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK-------PPFEANT-YQETYKRISRVEF 240
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 241 TFPDFV-TEGARDLISRLL 258
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKGDE-DFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G E EVEI S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 65 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 116
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S T + GT
Sbjct: 117 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLD 170
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 171 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 222
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 223 TFPDFV-TEGARDLISRLL 240
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 77
Query: 324 SLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
LR +S + + LV DY+P S ++ L K + + + +A
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
Y+H GI HRDIK N+LLD + K+ DFG AKQ + G +++ + + Y AP
Sbjct: 138 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAP 192
Query: 442 EYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
E ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 193 E-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 234
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 67 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 118
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S T + GT
Sbjct: 119 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTDLCGTLD 172
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 224
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 225 TFPDFV-TEGARDLISRLL 242
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ +Y
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEY 125
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + HK + + + + + KG+ YL G K I HRD+ + NIL+++
Sbjct: 126 LPYGSLRDYLQ-KHKER-IDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVEN 180
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT---FGYLAPEYALYGQLTEKSDVYSFGIVIL 463
E K+ DFGL K + + G F Y APE + + SDV+SFG+V+
Sbjct: 181 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLY 239
Query: 464 ELMSGRKVLDTSTSP 478
EL + ++ S SP
Sbjct: 240 ELFT---YIEKSKSP 251
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ +Y
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEY 99
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + HK + + + + + KG+ YL G K I HRD+ + NIL+++
Sbjct: 100 LPYGSLRDYLQ-KHKER-IDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVEN 154
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT---FGYLAPEYALYGQLTEKSDVYSFGIVIL 463
E K+ DFGL K + + G F Y APE + + SDV+SFG+V+
Sbjct: 155 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLY 213
Query: 464 ELMSGRKVLDTSTSP 478
EL + ++ S SP
Sbjct: 214 ELFT---YIEKSKSP 225
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 66 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 117
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S T + GT
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTXLCGTLD 171
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 223
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 224 TFPDFV-TEGARDLISRLL 241
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ +Y
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEY 100
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + HK + + + + + KG+ YL G K I HRD+ + NIL+++
Sbjct: 101 LPYGSLRDYLQ-KHKER-IDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVEN 155
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT---FGYLAPEYALYGQLTEKSDVYSFGIVIL 463
E K+ DFGL K + + G F Y APE + + SDV+SFG+V+
Sbjct: 156 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLY 214
Query: 464 ELMSGRKVLDTSTSP 478
EL + ++ S SP
Sbjct: 215 ELFT---YIEKSKSP 226
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 324 SLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
LR +S + + LV DY+P S ++ L K + + + +A
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
Y+H GI HRDIK N+LLD + K+ DFG AKQ + G +++ + + Y AP
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAP 191
Query: 442 EYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
E ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 192 E-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 66 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 117
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S T + GT
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTDLCGTLD 171
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 223
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 224 TFPDFV-TEGARDLISRLL 241
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 115/227 (50%), Gaps = 23/227 (10%)
Query: 265 GFSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNL 322
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNI 75
Query: 323 LSLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
+ LR +S + + LV DY+P S ++ L K + + + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGH---SHLTTRVAGTFG 437
AY+H GI HRDIK N+LLD + K+ DFG AKQ + G S++ +R
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 187
Query: 438 YLAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 188 YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ +Y
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEY 92
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + HK + + + + + KG+ YL G K I HRD+ + NIL+++
Sbjct: 93 LPYGSLRDYLQ-KHKER-IDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVEN 147
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT---FGYLAPEYALYGQLTEKSDVYSFGIVIL 463
E K+ DFGL K + + G F Y APE + + SDV+SFG+V+
Sbjct: 148 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLY 206
Query: 464 ELMSGRKVLDTSTSP 478
EL + ++ S SP
Sbjct: 207 ELFT---YIEKSKSP 218
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 80
Query: 324 SLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
LR +S + + LV DY+P S ++ L K + + + +A
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
Y+H GI HRDIK N+LLD + K+ DFG AKQ + G +++ + + Y AP
Sbjct: 141 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAP 195
Query: 442 EYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
E ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 196 E-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 237
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ +Y
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEY 93
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + HK + + + + + KG+ YL G K I HRD+ + NIL+++
Sbjct: 94 LPYGSLRDYLQ-KHKER-IDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVEN 148
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT---FGYLAPEYALYGQLTEKSDVYSFGIVIL 463
E K+ DFGL K + + G F Y APE + + SDV+SFG+V+
Sbjct: 149 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLY 207
Query: 464 ELMSGRKVLDTSTSP 478
EL + ++ S SP
Sbjct: 208 ELFT---YIEKSKSP 219
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 108/205 (52%), Gaps = 21/205 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G VYKG HG+ VAVK +L++ + F NEV ++ K RH N+L G
Sbjct: 43 IGSGSFGTVYKGKW-HGD-VAVK-MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
S+ + +V + +L ++ I + ++ + I A+G+ YLH
Sbjct: 100 ------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH--- 148
Query: 389 KPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEGHSHLTTRVAGTFGYLAPEYALY- 446
I HRD+KS NI L +L K+ DFGLA +S SH +++G+ ++APE
Sbjct: 149 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 447 --GQLTEKSDVYSFGIVILELMSGR 469
+ +SDVY+FGIV+ ELM+G+
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 18/220 (8%)
Query: 269 NNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGC 328
++G+GA G+V K R + VA+KQI + + F E+ +S++ H N++ L G
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 69
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
C+ LV +Y G+L + + + T + ++G+AYLH
Sbjct: 70 CLNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 389 KPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYG 447
+ HRD+K N+LL + K+ DFG A + +H+T G+ ++APE
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNN-KGSAAWMAPEVFEGS 178
Query: 448 QLTEKSDVYSFGIVILELMSGRKVLDTSTSP-FQLITDWA 486
+EK DV+S+GI++ E+++ RK D P F+++ WA
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WA 216
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 23/226 (10%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 81
Query: 324 SLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
LR +S + + LV DY+P S ++ L K + + + +A
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGH---SHLTTRVAGTFGY 438
Y+H GI HRDIK N+LLD + K+ DFG AKQ + G S++ +R Y
Sbjct: 142 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 193
Query: 439 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
APE ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 194 RAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 238
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 95
Query: 324 SLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
LR +S + + LV DY+P S ++ L K + + + +A
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
Y+H GI HRDIK N+LLD + K+ DFG AKQ + G +++ + + Y AP
Sbjct: 156 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAP 210
Query: 442 EYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
E ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 211 EL-IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 252
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 23/226 (10%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 104
Query: 324 SLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
LR +S + + LV DY+P S ++ L K + + + +A
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGH---SHLTTRVAGTFGY 438
Y+H GI HRDIK N+LLD + K+ DFG AKQ + G S++ +R Y
Sbjct: 165 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 216
Query: 439 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
APE ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 217 RAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 261
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ +Y
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEY 112
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + HK + + + + + KG+ YL G K I HRD+ + NIL+++
Sbjct: 113 LPYGSLRDYLQ-KHKER-IDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVEN 167
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT---FGYLAPEYALYGQLTEKSDVYSFGIVIL 463
E K+ DFGL K + + G F Y APE + + SDV+SFG+V+
Sbjct: 168 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLY 226
Query: 464 ELMSGRKVLDTSTSP 478
EL + ++ S SP
Sbjct: 227 ELFT---YIEKSKSP 238
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 110
Query: 324 SLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
LR +S + + LV DY+P S ++ L K + + + +A
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
Y+H GI HRDIK N+LLD + K+ DFG AKQ + G +++ + + Y AP
Sbjct: 171 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAP 225
Query: 442 EYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
E ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 226 EL-IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ +Y
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEY 97
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + HK + + + + + KG+ YL G K I HRD+ + NIL+++
Sbjct: 98 LPYGSLRDYLQ-KHKER-IDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVEN 152
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT---FGYLAPEYALYGQLTEKSDVYSFGIVIL 463
E K+ DFGL K + + G F Y APE + + SDV+SFG+V+
Sbjct: 153 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLY 211
Query: 464 ELMSGRKVLDTSTSP 478
EL + ++ S SP
Sbjct: 212 ELFT---YIEKSKSP 223
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ +Y
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEY 94
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + HK + + + + + KG+ YL G K I HRD+ + NIL+++
Sbjct: 95 LPYGSLRDYLQ-KHKER-IDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVEN 149
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT---FGYLAPEYALYGQLTEKSDVYSFGIVIL 463
E K+ DFGL K + + G F Y APE + + SDV+SFG+V+
Sbjct: 150 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLY 208
Query: 464 ELMSGRKVLDTSTSP 478
EL + ++ S SP
Sbjct: 209 ELFT---YIEKSKSP 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 23/226 (10%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 110
Query: 324 SLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
LR +S + + LV DY+P S ++ L K + + + +A
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGH---SHLTTRVAGTFGY 438
Y+H GI HRDIK N+LLD + K+ DFG AKQ + G S++ +R Y
Sbjct: 171 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 222
Query: 439 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
APE ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 223 RAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 15/194 (7%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ +Y
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEY 101
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + HK + + + + + KG+ YL G K I HRD+ + NIL+++
Sbjct: 102 LPYGSLRDYLQ-KHKER-IDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVEN 156
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT--FGYLAPEYALYGQLTEKSDVYSFGIVILE 464
E K+ DFGL K + + G + APE + + SDV+SFG+V+ E
Sbjct: 157 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 216
Query: 465 LMSGRKVLDTSTSP 478
L + ++ S SP
Sbjct: 217 LFT---YIEKSKSP 227
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 23/226 (10%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 89
Query: 324 SLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
LR +S + + LV DY+P S ++ L K + + + +A
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGH---SHLTTRVAGTFGY 438
Y+H GI HRDIK N+LLD + K+ DFG AKQ + G S++ +R Y
Sbjct: 150 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 201
Query: 439 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
APE ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 202 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 246
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 88
Query: 324 SLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
LR +S + + LV DY+P S ++ L K + + + +A
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
Y+H GI HRDIK N+LLD + K+ DFG AKQ + G +++ + + Y AP
Sbjct: 149 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAP 203
Query: 442 EYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
E ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 204 EL-IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ +Y
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEY 94
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + HK + + + + + KG+ YL G K I HRD+ + NIL+++
Sbjct: 95 LPYGSLRDYLQ-KHKER-IDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVEN 149
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT---FGYLAPEYALYGQLTEKSDVYSFGIVIL 463
E K+ DFGL K + + G F Y APE + + SDV+SFG+V+
Sbjct: 150 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLY 208
Query: 464 ELMSGRKVLDTSTSP 478
EL + ++ S SP
Sbjct: 209 ELFT---YIEKSKSP 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 84
Query: 324 SLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
LR +S + + LV DY+P S ++ L K + + + +A
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
Y+H GI HRDIK N+LLD + K+ DFG AKQ + G +++ + + Y AP
Sbjct: 145 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAP 199
Query: 442 EYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
E ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 200 EL-IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 241
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 108/205 (52%), Gaps = 21/205 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G VYKG HG+ VAVK +L++ + F NEV ++ K RH N+L G
Sbjct: 44 IGSGSFGTVYKGKW-HGD-VAVK-MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
S+ + +V + +L ++ I + ++ + I A+G+ YLH
Sbjct: 101 ------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLH--- 149
Query: 389 KPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEGHSHLTTRVAGTFGYLAPEYALY- 446
I HRD+KS NI L +L K+ DFGLA +S SH +++G+ ++APE
Sbjct: 150 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 447 --GQLTEKSDVYSFGIVILELMSGR 469
+ +SDVY+FGIV+ ELM+G+
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 23/226 (10%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 112
Query: 324 SLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
LR +S + + LV DY+P S ++ L K + + + +A
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGH---SHLTTRVAGTFGY 438
Y+H GI HRDIK N+LLD + K+ DFG AKQ + G S++ +R Y
Sbjct: 173 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 224
Query: 439 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
APE ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 225 RAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 269
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 88
Query: 324 SLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
LR +S + + LV DY+P S ++ L K + + + +A
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
Y+H GI HRDIK N+LLD + K+ DFG AKQ + G +++ + + Y AP
Sbjct: 149 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAP 203
Query: 442 EYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
E ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 204 EL-IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 71 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 122
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S T + GT
Sbjct: 123 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLD 176
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 177 YLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 228
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 229 TFPDFV-TEGARDLISRLL 246
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 69 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 120
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S T + GT
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLD 174
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 226
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 227 TFPDFV-TEGARDLISRLL 244
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 17/195 (8%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ +Y
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEY 97
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + +R + + + + KG+ YL G K I HRD+ + NIL+++
Sbjct: 98 LPYGSLRDYLQAHAER--IDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVEN 152
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT---FGYLAPEYALYGQLTEKSDVYSFGIVIL 463
E K+ DFGL K + + G F Y APE + + SDV+SFG+V+
Sbjct: 153 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLY 211
Query: 464 ELMSGRKVLDTSTSP 478
EL + ++ S SP
Sbjct: 212 ELFT---YIEKSKSP 223
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 71
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 99/218 (45%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA+G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P G + + K + + I ++
Sbjct: 71 RHPNILRLYGYF-----HDATRVYLILEYAPRGEVYKEL---QKLSKFDEQRTATYITEL 122
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S T + GT
Sbjct: 123 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLD 176
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 228
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 229 TFPDFV-TEGARDLISRLL 246
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ +Y
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEY 112
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + HK + + + + + KG+ YL G K I HRD+ + NIL+++
Sbjct: 113 LPYGSLRDYLQ-KHKER-IDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVEN 167
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT---FGYLAPEYALYGQLTEKSDVYSFGIVIL 463
E K+ DFGL K + + G F Y APE + + SDV+SFG+V+
Sbjct: 168 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLY 226
Query: 464 ELMSGRKVLDTSTSP 478
EL + ++ S SP
Sbjct: 227 ELFT---YIEKSKSP 238
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 23/226 (10%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 114
Query: 324 SLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
LR +S + + LV DY+P S ++ L K + + + +A
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGH---SHLTTRVAGTFGY 438
Y+H GI HRDIK N+LLD + K+ DFG AKQ + G S++ +R Y
Sbjct: 175 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 226
Query: 439 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
APE ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 227 RAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 271
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 111/209 (53%), Gaps = 29/209 (13%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G VYKG HG+ VAVK +L++ + F NEV ++ K RH N+L G
Sbjct: 32 IGSGSFGTVYKGKW-HGD-VAVK-MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK----GIAYL 384
S+ + +V + +L ++ S + ++ K ++D+A+ G+ YL
Sbjct: 89 ------STKPQLAIVTQWCEGSSLYHHLHASETKFEM------KKLIDIARQTARGMDYL 136
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLA-KQSLEGHSHLTTRVAGTFGYLAPEY 443
H I HRD+KS NI L + K+ DFGLA ++S SH +++G+ ++APE
Sbjct: 137 H---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 193
Query: 444 ALY---GQLTEKSDVYSFGIVILELMSGR 469
+ +SDVY+FGIV+ ELM+G+
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 23/226 (10%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIRHRNLL 323
++ +IG G+ G+VY+ L G LVA+K++L D+ F N E++I+ K+ H N++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 155
Query: 324 SLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
LR +S + + LV DY+P S ++ L K + + + +A
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGH---SHLTTRVAGTFGY 438
Y+H GI HRDIK N+LLD + K+ DFG AKQ + G S++ +R Y
Sbjct: 216 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 267
Query: 439 LAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
APE ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 268 RAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 312
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 17/195 (8%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ +Y
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEY 95
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L D + HK + + + + + KG+ YL G K I HR++ + NIL+++
Sbjct: 96 LPYGSLRDYLQ-KHKER-IDHIKLLQYTSQICKGMEYL--GTKRYI-HRNLATRNILVEN 150
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT---FGYLAPEYALYGQLTEKSDVYSFGIVIL 463
E K+ DFGL K + + + G F Y APE + + SDV+SFG+V+
Sbjct: 151 ENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLY 209
Query: 464 ELMSGRKVLDTSTSP 478
EL + ++ S SP
Sbjct: 210 ELFT---YIEKSKSP 221
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 154 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 204
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH---SHLTTRVAGTFG 437
+ +L HRD+ + N +LD + KVADFGLA+ + H T
Sbjct: 205 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 93 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 143
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH---SHLTTRVAGTFG 437
+ +L HRD+ + N +LD + KVADFGLA+ + H T
Sbjct: 144 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 95 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 145
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH---SHLTTRVAGTFG 437
+ +L HRD+ + N +LD + KVADFGLA+ + H T
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 72
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 67 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITEL 118
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S S T ++GT
Sbjct: 119 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SCHAPSSRRTTLSGTLD 172
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 224
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 225 TFPDFV-TEGARDLISRLL 242
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 95 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 145
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH---SHLTTRVAGTFG 437
+ +L HRD+ + N +LD + KVADFGLA+ + H T
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 100 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 150
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH---SHLTTRVAGTFG 437
+ +L HRD+ + N +LD + KVADFGLA+ + H T
Sbjct: 151 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 99/218 (45%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG-- 72
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 27/249 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKIRHRNLLSLRG 327
+G+G G VY R + ++L L+ G + EVEI S +RH N+L L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 328 CCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYG 387
R +L+ +Y P GT+ + K + + I ++A ++Y H
Sbjct: 80 YF-----HDATRVYLILEYAPLGTVYRELQ---KLSRFDEQRTATYITELANALSYCH-- 129
Query: 388 LKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYG 447
+ HRDIK N+LL S K+ADFG S+ S T + GT YL PE
Sbjct: 130 -SKRVIHRDIKPENLLLGSNGELKIADFGW---SVHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 448 QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDDIFDEFIRAEG 507
EK D++S G++ E + G PF+ T + + +V+ F +F+ EG
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVG-------MPPFEAHT-YQETYRRISRVEFTFPDFV-TEG 236
Query: 508 ARAVMERFV 516
AR ++ R +
Sbjct: 237 ARDLISRLL 245
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 63 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 114
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S T + GT
Sbjct: 115 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTTLCGTLD 168
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 220
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 221 TFPDFV-TEGARDLISRLL 238
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 71
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 269 NNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLL 323
N +IG+G G VY GTL + AVK + + G+ F E I+ H N+L
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
SL G C+ S+ S +V YM +G L + I R + P K +I + VAKG
Sbjct: 96 SLLGICLRSEGSP----LVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKG 146
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH---SHLTTRVAGTFG 437
+ +L HRD+ + N +LD + KVADFGLA+ + H T
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E + T KSDV+SFG+++ ELM+
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 110/209 (52%), Gaps = 29/209 (13%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G VYKG HG+ VAVK +L++ + F NEV ++ K RH N+L G
Sbjct: 20 IGSGSFGTVYKGKW-HGD-VAVK-MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK----GIAYL 384
S+ + +V + +L ++ S + ++ K ++D+A+ G+ YL
Sbjct: 77 ------STKPQLAIVTQWCEGSSLYHHLHASETKFEM------KKLIDIARQTARGMDYL 124
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEGHSHLTTRVAGTFGYLAPEY 443
H I HRD+KS NI L + K+ DFGLA +S SH +++G+ ++APE
Sbjct: 125 H---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 181
Query: 444 ALY---GQLTEKSDVYSFGIVILELMSGR 469
+ +SDVY+FGIV+ ELM+G+
Sbjct: 182 IRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 267 SQNNLIGQGASGIVYKGTLRHGN-----LVAVKQI-LDLDTKGDEDFTNEVEIISKIRHR 320
++ +IG G G VYKG L+ + VA+K + K DF E I+ + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ L G S K ++ +YM NG L + K + + Q ++ +A G
Sbjct: 107 NIIRLEGVI-----SKYKPMMIITEYMENGALDK--FLREKDGEFSVLQLVGMLRGIAAG 159
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG---TFG 437
+ YL HRD+ + NIL++S L KV+DFGL++ LE T +G
Sbjct: 160 MKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSR-VLEDDPEATYTTSGGKIPIR 215
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ APE Y + T SDV+SFGIV+ E+M+
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 17/230 (7%)
Query: 245 VLPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRHGNL----VAVKQI-LDL 299
++P + H E S + ++G G G V G L+ + VA+K + +
Sbjct: 14 LVPRGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 73
Query: 300 DTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISIS 359
K DF E I+ + H N++ L G S K +V +YM NG+L D+
Sbjct: 74 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSL-DSFLRK 127
Query: 360 HKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK 419
H Q T Q ++ +A G+ YL G HRD+ + NIL++S L KV+DFGL++
Sbjct: 128 HD-AQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSR 183
Query: 420 QSLEGHSHLTTRVAGT--FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ T G + +PE Y + T SDV+S+GIV+ E+MS
Sbjct: 184 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 16/210 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G +G V+ G VAVK L + + F E ++ +++H+ L+ L VT
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVVT 78
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ +YM NG+L D + K LT + + +A+G+A++ +
Sbjct: 79 QEPI-----YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERN 129
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L+ K+ADFGLA+ L + T R F + APE YG
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLAR--LIEDAEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 450 TEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
T KSDV+SFGI++ E+++ GR T+P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 70
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 71 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 122
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 123 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 219
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 33/220 (15%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLD-TKGDEDFTNEVEIISKIRHRN 321
+ +IG G G VY+ G+ VAVK D D ++ E+ E ++ + ++H N
Sbjct: 9 LTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ----LTWPQRKKIIVDV 377
+++LRG C+ + LV ++ G L N +S KR + W V +
Sbjct: 68 IIALRGVCLKEPNLC-----LVMEFARGGPL--NRVLSGKRIPPDILVNWA------VQI 114
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELN--------AKVADFGLAKQSLEGHSHLT 429
A+G+ YLH I HRD+KS+NIL+ ++ K+ DFGLA+ E H
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---EWHRTTK 171
Query: 430 TRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
AG + ++APE ++ SDV+S+G+++ EL++G
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 68 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 119
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S + GT
Sbjct: 120 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRXXLCGTLD 173
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 225
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 226 TFPDFV-TEGARDLISRLL 243
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 69 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITEL 120
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S + GT
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRAALCGTLD 174
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 226
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 227 TFPDFV-TEGARDLISRLL 244
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 92 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITEL 143
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S + GT
Sbjct: 144 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRDDLCGTLD 197
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 249
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 250 TFPDFV-TEGARDLISRLL 267
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 68 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITEL 119
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+A+FG S+ S T + GT
Sbjct: 120 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGW---SVHAPSSRRTTLCGTLD 173
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 225
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 226 TFPDFV-TEGARDLISRLL 243
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNL----VAVKQI-LDLDTKGDEDFTNEVEIISK 316
ATN S + ++G G G V G L+ + VA+K + + K DF E I+ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVD 376
H N++ L G S K +V +YM NG+L D+ H Q T Q ++
Sbjct: 103 FDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSL-DSFLRKHD-AQFTVIQLVGMLRG 155
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT- 435
+A G+ YL G HRD+ + NIL++S L KV+DFGLA+ + T G
Sbjct: 156 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI 212
Query: 436 -FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ +PE Y + T SDV+S+GIV+ E+MS
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDW 220
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+GA G V R +I+D+ D E+ E+ I + H N++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
G ++L +Y G L D I + P ++ + G+ YLH G+
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
GI HRDIK N+LLD N K++DFGLA L ++ GT Y+APE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 449 L-TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
E DV+S GIV+ +++G D + Q +DW
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY ++ + ++L L+ G + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G DS+ R +L+ +Y P GT+ + K + + I ++
Sbjct: 66 RHPNILRLYGYF---HDST--RVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 117
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S + GT
Sbjct: 118 ANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRAALCGTLD 171
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQDTYKRISRVEF 223
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 224 TFPDFV-TEGARDLISRLL 241
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 69 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 120
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+A+FG S+ S T + GT
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGW---SVHAPSSRRTTLCGTLD 174
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 226
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 227 TFPDFV-TEGARDLISRLL 244
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 21/225 (9%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
++ +IG G+ G+VY+ L G LVA+K++L +G E++I+ K+ H N++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVR 77
Query: 325 LRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
LR +S + + LV DY+P S ++ L K + + + +AY
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGH---SHLTTRVAGTFGYL 439
+H GI HRDIK N+LLD + K+ DFG AKQ + G S++ +R Y
Sbjct: 138 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YR 189
Query: 440 APEYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
APE ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 190 APE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 26/236 (11%)
Query: 234 HEQFVSNLQASVLPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH-GNLVA 292
HEQF + LQ V P ++ F + IG+G++GIV T +H G VA
Sbjct: 27 HEQFRAALQLVVSPGDPREYL---------ANFIK---IGEGSTGIVCIATEKHTGKQVA 74
Query: 293 VKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTL 352
VK++ + E NEV I+ H N++ + + D+ ++V +++ G L
Sbjct: 75 VKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDEL-----WVVMEFLEGGAL 129
Query: 353 SDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKV 412
+D ++H R + Q + + V + ++YLH G+ HRDIKS +ILL S+ K+
Sbjct: 130 TD--IVTHTR--MNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKL 182
Query: 413 ADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+DFG Q + + GT ++APE + D++S GI+++E++ G
Sbjct: 183 SDFGFCAQ-VSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 119/244 (48%), Gaps = 26/244 (10%)
Query: 226 KKRKQIALHEQFVSNLQASVLPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTL 285
++ Q HEQF + LQ V P + + F + IG+G++GIV T+
Sbjct: 3 QREPQRVSHEQFRAALQLVVDPGDPRSYL---------DNFIK---IGEGSTGIVCIATV 50
Query: 286 RH-GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVY 344
R G LVAVK++ + E NEV I+ +H N++ + + D+ ++V
Sbjct: 51 RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL-----WVVM 105
Query: 345 DYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILL 404
+++ G L+D ++H R + Q + + V + ++ LH G+ HRDIKS +ILL
Sbjct: 106 EFLEGGALTD--IVTHTR--MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILL 158
Query: 405 DSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE 464
+ K++DFG Q + + GT ++APE + D++S GI+++E
Sbjct: 159 THDGRVKLSDFGFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 217
Query: 465 LMSG 468
++ G
Sbjct: 218 MVDG 221
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 21/225 (9%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
++ +IG G+ G+VY+ L G LVA+K++L +G E++I+ K+ H N++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVR 77
Query: 325 LRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
LR +S + + LV DY+P S ++ L K + + + +AY
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGH---SHLTTRVAGTFGYL 439
+H GI HRDIK N+LLD + K+ DFG AKQ + G S++ +R Y
Sbjct: 138 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YR 189
Query: 440 APEYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
APE ++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 190 APE-LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 118/254 (46%), Gaps = 25/254 (9%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGD------EDFTNEVEIISKIR 318
F NL+G+G+ VY+ H L VA+K I D K + NEV+I +++
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMI---DKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H ++L L S+ +LV + NG + N + ++ K + + + + +
Sbjct: 70 HPSILELYNYFEDSN-----YVYLVLEMCHNGEM--NRYLKNRVKPFSENEARHFMHQII 122
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
G+ YLH GI HRD+ +N+LL +N K+ADFGLA Q H T + GT Y
Sbjct: 123 TGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNY 178
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL----ITDWAWVLAKSGK 494
++PE A +SDV+S G + L+ GR DT T L + D+ S +
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIE 238
Query: 495 VDDIFDEFIRAEGA 508
D+ + +R A
Sbjct: 239 AKDLIHQLLRRNPA 252
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 67 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 118
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S + GT
Sbjct: 119 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRDTLCGTLD 172
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 224
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 225 TFPDFV-TEGARDLISRLL 242
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKGDE-DFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G E EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 66 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 117
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S + GT
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRAALCGTLD 171
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 223
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 224 TFPDFV-TEGARDLISRLL 241
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 66 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 117
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S + GT
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRXXLCGTLD 171
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 223
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 224 TFPDFV-TEGARDLISRLL 241
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 112/212 (52%), Gaps = 29/212 (13%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI--RHRNLLSLRGCC 329
+G+G G V++G L HG VAVK ++ ++ + E EI + + RH N+L
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKI---FSSRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL- 388
+TS +SS + +L+ Y +G+L D + +R+ L ++ V A G+A+LH +
Sbjct: 72 MTSRNSSTQL-WLITHYHEHGSLYDFL----QRQTLEPHLALRLAVSAACGLAHLHVEIF 126
Query: 389 ----KPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHL----TTRVAGTFGYLA 440
KP I HRD KS N+L+ S L +AD GLA +G +L RV GT Y+A
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMA 185
Query: 441 PEYALYGQLT-------EKSDVYSFGIVILEL 465
PE L Q+ + +D+++FG+V+ E+
Sbjct: 186 PE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 69 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 120
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S + GT
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRXXLCGTLD 174
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 226
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 227 TFPDFV-TEGARDLISRLL 244
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 119/244 (48%), Gaps = 26/244 (10%)
Query: 226 KKRKQIALHEQFVSNLQASVLPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTL 285
++ Q HEQF + LQ V P + + F + IG+G++GIV T+
Sbjct: 5 QREPQRVSHEQFRAALQLVVDPGDPRSYL---------DNFIK---IGEGSTGIVCIATV 52
Query: 286 RH-GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVY 344
R G LVAVK++ + E NEV I+ +H N++ + + D+ ++V
Sbjct: 53 RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL-----WVVM 107
Query: 345 DYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILL 404
+++ G L+D ++H R + Q + + V + ++ LH G+ HRDIKS +ILL
Sbjct: 108 EFLEGGALTD--IVTHTR--MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILL 160
Query: 405 DSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE 464
+ K++DFG Q + + GT ++APE + D++S GI+++E
Sbjct: 161 THDGRVKLSDFGFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 219
Query: 465 LMSG 468
++ G
Sbjct: 220 MVDG 223
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNL----VAVKQI-LDLDTKGDEDFTNEVEIISK 316
ATN S + ++G G G V G L+ + VA+K + + K DF E I+ +
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVD 376
H N++ L G S K +V +YM NG+L D+ H Q T Q ++
Sbjct: 74 FDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSL-DSFLRKHD-AQFTVIQLVGMLRG 126
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT- 435
+A G+ YL G HRD+ + NIL++S L KV+DFGL++ + T G
Sbjct: 127 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 436 -FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ +PE Y + T SDV+S+GIV+ E+MS
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 112/259 (43%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P G + + K + + I ++
Sbjct: 71 RHPNILRLYGYF-----HDATRVYLILEYAPRGEVYKELQ---KLSKFDEQRTATYITEL 122
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S + GT
Sbjct: 123 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRXXLXGTLD 176
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 228
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 229 TFPDFV-TEGARDLISRLL 246
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNL----VAVKQI-LDLDTKGDEDFTNEVEIISK 316
ATN S + ++G G G V G L+ + VA+K + + K DF E I+ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVD 376
H N++ L G S K +V +YM NG+L D+ H Q T Q ++
Sbjct: 103 FDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSL-DSFLRKHD-AQFTVIQLVGMLRG 155
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT- 435
+A G+ YL G HRD+ + NIL++S L KV+DFGL++ + T G
Sbjct: 156 IASGMKYLS---DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 436 -FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ +PE Y + T SDV+S+GIV+ E+MS
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 266 FSQNNLIGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
++ +IG G+ G+VY+ L G LVA+K++L +G E++I+ K+ H N++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVR 77
Query: 325 LRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
LR +S + + LV DY+P S ++ L K + + + +AY
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLAPE 442
+H GI HRDIK N+LLD + K+ DFG AKQ + G +++ + + Y APE
Sbjct: 138 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-YRAPE 192
Query: 443 YALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
++G T DV+S G V+ EL+ G+ + + QL+
Sbjct: 193 -LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 27/259 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKI 317
A F +G+G G VY + + ++L L+ G + EVEI S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH N+L L G R +L+ +Y P GT+ + K + + I ++
Sbjct: 69 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITEL 120
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A ++Y H + HRDIK N+LL S K+ADFG S+ S + GT
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRDDLCGTLD 174
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDD 497
YL PE EK D++S G++ E + G+ + +T + + +V+
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEF 226
Query: 498 IFDEFIRAEGARAVMERFV 516
F +F+ EGAR ++ R +
Sbjct: 227 TFPDFV-TEGARDLISRLL 244
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 20/201 (9%)
Query: 288 GNLVAVKQILDLDTKGDE--DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYD 345
G VAVK L ++ G+ D E+EI+ + H N++ +G C T D +G + L+ +
Sbjct: 38 GEQVAVKS-LKPESGGNHIADLKKEIEILRNLYHENIVKYKGIC-TEDGGNGIK--LIME 93
Query: 346 YMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLD 405
++P+G+L + + + ++ Q+ K V + KG+ YL G + + HRD+ + N+L++
Sbjct: 94 FLPSGSLKE--YLPKNKNKINLKQQLKYAVQICKGMDYL--GSRQYV-HRDLAARNVLVE 148
Query: 406 SELNAKVADFGLAKQSLEGHSHLTT----RVAGTFGYLAPEYALYGQLTEKSDVYSFGIV 461
SE K+ DFGL K ++E T R + F Y APE + + SDV+SFG+
Sbjct: 149 SEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVT 206
Query: 462 ILELMSGRKVLDTSTSPFQLI 482
+ EL++ D+ +SP L
Sbjct: 207 LHELLT---YCDSDSSPMALF 224
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 119/244 (48%), Gaps = 26/244 (10%)
Query: 226 KKRKQIALHEQFVSNLQASVLPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTL 285
++ Q HEQF + LQ V P + + F + IG+G++GIV T+
Sbjct: 125 QREPQRVSHEQFRAALQLVVDPGDPRSYL---------DNFIK---IGEGSTGIVCIATV 172
Query: 286 RH-GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVY 344
R G LVAVK++ + E NEV I+ +H N++ + + D+ ++V
Sbjct: 173 RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL-----WVVM 227
Query: 345 DYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILL 404
+++ G L+D ++H R + Q + + V + ++ LH G+ HRDIKS +ILL
Sbjct: 228 EFLEGGALTD--IVTHTR--MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILL 280
Query: 405 DSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE 464
+ K++DFG Q + + GT ++APE + D++S GI+++E
Sbjct: 281 THDGRVKLSDFGFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 339
Query: 465 LMSG 468
++ G
Sbjct: 340 MVDG 343
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ G VAVK L + + F E ++ +++H+ L+ L VT
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVVT 87
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ +YM NG+L D + K LT + + +A+G+A++ +
Sbjct: 88 QEPI-----YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERN 138
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L+ K+ADFGLA+ L + T R F + APE YG
Sbjct: 139 YIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTF 196
Query: 450 TEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
T KSDV+SFGI++ E+++ GR T+P
Sbjct: 197 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP 226
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 20/201 (9%)
Query: 288 GNLVAVKQILDLDTKGDE--DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYD 345
G VAVK L ++ G+ D E+EI+ + H N++ +G C T D +G + L+ +
Sbjct: 50 GEQVAVKS-LKPESGGNHIADLKKEIEILRNLYHENIVKYKGIC-TEDGGNGIK--LIME 105
Query: 346 YMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLD 405
++P+G+L + + + ++ Q+ K V + KG+ YL G + + HRD+ + N+L++
Sbjct: 106 FLPSGSLKE--YLPKNKNKINLKQQLKYAVQICKGMDYL--GSRQYV-HRDLAARNVLVE 160
Query: 406 SELNAKVADFGLAKQSLEGHSHLTT----RVAGTFGYLAPEYALYGQLTEKSDVYSFGIV 461
SE K+ DFGL K ++E T R + F Y APE + + SDV+SFG+
Sbjct: 161 SEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVT 218
Query: 462 ILELMSGRKVLDTSTSPFQLI 482
+ EL++ D+ +SP L
Sbjct: 219 LHELLT---YCDSDSSPMALF 236
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 116/236 (49%), Gaps = 26/236 (11%)
Query: 234 HEQFVSNLQASVLPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH-GNLVA 292
HEQF + LQ V P + + F + IG+G++GIV T+R G LVA
Sbjct: 2 HEQFRAALQLVVDPGDPRSYL---------DNFIK---IGEGSTGIVCIATVRSSGKLVA 49
Query: 293 VKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTL 352
VK++ + E NEV I+ +H N++ + + D+ ++V +++ G L
Sbjct: 50 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL-----WVVMEFLEGGAL 104
Query: 353 SDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKV 412
+D ++H R + Q + + V + ++ LH G+ HRDIKS +ILL + K+
Sbjct: 105 TD--IVTHTR--MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKL 157
Query: 413 ADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+DFG Q + + GT ++APE + D++S GI+++E++ G
Sbjct: 158 SDFGFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 119/244 (48%), Gaps = 26/244 (10%)
Query: 226 KKRKQIALHEQFVSNLQASVLPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTL 285
++ Q HEQF + LQ V P + + F + IG+G++GIV T+
Sbjct: 48 QREPQRVSHEQFRAALQLVVDPGDPRSYL---------DNFIK---IGEGSTGIVCIATV 95
Query: 286 RH-GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVY 344
R G LVAVK++ + E NEV I+ +H N++ + + D+ ++V
Sbjct: 96 RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL-----WVVM 150
Query: 345 DYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILL 404
+++ G L+D ++H R + Q + + V + ++ LH G+ HRDIKS +ILL
Sbjct: 151 EFLEGGALTD--IVTHTR--MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILL 203
Query: 405 DSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE 464
+ K++DFG Q + + GT ++APE + D++S GI+++E
Sbjct: 204 THDGRVKLSDFGFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 262
Query: 465 LMSG 468
++ G
Sbjct: 263 MVDG 266
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNL----VAVKQI-LDLDTKGDEDFTNEVEIISK 316
ATN S + ++G G G V G L+ + VA+K + + K DF E I+ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVD 376
H N++ L G S K +V +YM NG+L D+ H Q T Q ++
Sbjct: 103 FDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSL-DSFLRKHD-AQFTVIQLVGMLRG 155
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT- 435
+A G+ YL G HRD+ + NIL++S L KV+DFGL++ + T G
Sbjct: 156 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 436 -FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ +PE Y + T SDV+S+GIV+ E+MS
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNL----VAVKQI-LDLDTKGDEDFTNEVEIISK 316
ATN S + ++G G G V G L+ + VA+K + + K DF E I+ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVD 376
H N++ L G S K +V +YM NG+L D+ H Q T Q ++
Sbjct: 103 FDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSL-DSFLRKHD-AQFTVIQLVGMLRG 155
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT- 435
+A G+ YL G HRD+ + NIL++S L KV+DFGL++ + T G
Sbjct: 156 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 436 -FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ +PE Y + T SDV+S+GIV+ E+MS
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G+V G + VAVK I + DE F E + + K+ H L+ G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE-FFQEAQTMMKLSHPKLVKFYGVC-- 72
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
S ++V +Y+ NG L + + SH K L Q ++ DV +G+A+L
Sbjct: 73 ---SKEYPIYIVTEYISNGCLLNYLR-SHG-KGLEPSQLLEMCYDVCEGMAFLE---SHQ 124
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE 451
HRD+ + N L+D +L KV+DFG+ + L+ + + APE Y + +
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSS 184
Query: 452 KSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDDIFDEFIRAEGARAV 511
KSDV++FGI++ E+ S K+ P+ L T+ + V+ K + ++ + ++ +
Sbjct: 185 KSDVWAFGILMWEVFSLGKM------PYDLYTN-SEVVLKVSQGHRLYRPHLASDTIYQI 237
Query: 512 MERFVLVGILCAHVMVALRPTITDALKMLE 541
M C H + RPT L +E
Sbjct: 238 MYS-------CWHELPEKRPTFQQLLSSIE 260
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ G VAVK L + + F E ++ +++H+ L+ L VT
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVVT 80
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ +YM NG+L D + K LT + + +A+G+A++ +
Sbjct: 81 QEPI-----YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERN 131
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L+ K+ADFGLA+ L + T R F + APE YG
Sbjct: 132 YIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTF 189
Query: 450 TEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
T KSDV+SFGI++ E+++ GR T+P
Sbjct: 190 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP 219
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ G VAVK L + + F E ++ +++H+ L+ L VT
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVVT 84
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ +YM NG+L D + K LT + + +A+G+A++ +
Sbjct: 85 QEPI-----YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERN 135
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L+ K+ADFGLA+ L + T R F + APE YG
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTF 193
Query: 450 TEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
T KSDV+SFGI++ E+++ GR T+P
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP 223
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ G VAVK L + + F E ++ +++H+ L+ L VT
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVVT 79
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ +YM NG+L D + K LT + + +A+G+A++ +
Sbjct: 80 QEPI-----YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERN 130
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L+ K+ADFGLA+ L + T R F + APE YG
Sbjct: 131 YIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTF 188
Query: 450 TEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
T KSDV+SFGI++ E+++ GR T+P
Sbjct: 189 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP 218
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNL----VAVKQI-LDLDTKGDEDFTNEVEIISK 316
ATN S + ++G G G V G L+ + VA+K + + K DF E I+ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVD 376
H N++ L G S K +V +YM NG+L D+ H Q T Q ++
Sbjct: 103 FDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSL-DSFLRKHD-AQFTVIQLVGMLRG 155
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT- 435
+A G+ YL G HRD+ + NIL++S L KV+DFGL++ + T G
Sbjct: 156 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 436 -FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ +PE Y + T SDV+S+GIV+ E+MS
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNL----VAVKQI-LDLDTKGDEDFTNEVEIISK 316
ATN S + ++G G G V G L+ + VA+K + + K DF E I+ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVD 376
H N++ L G S K +V +YM NG+L D+ H Q T Q ++
Sbjct: 103 FDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSL-DSFLRKHD-AQFTVIQLVGMLRG 155
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT- 435
+A G+ YL G HRD+ + NIL++S L KV+DFGL++ + T G
Sbjct: 156 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 436 -FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ +PE Y + T SDV+S+GIV+ E+MS
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ G VAVK L + + F E ++ +++H+ L+ L VT
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVVT 78
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ +YM NG+L D + K LT + + +A+G+A++ +
Sbjct: 79 QEPI-----YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERN 129
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L+ K+ADFGLA+ L + T R F + APE YG
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 450 TEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
T KSDV+SFGI++ E+++ GR T+P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ G VAVK L + + F E ++ +++H+ L+ L VT
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVVT 86
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ +YM NG+L D + K LT + + +A+G+A++ +
Sbjct: 87 QEPI-----YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERN 137
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L+ K+ADFGLA+ L + T R F + APE YG
Sbjct: 138 YIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTF 195
Query: 450 TEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
T KSDV+SFGI++ E+++ GR T+P
Sbjct: 196 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP 225
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ G VAVK L + + F E ++ +++H+ L+ L VT
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVVT 78
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ +YM NG+L D + K LT + + +A+G+A++ +
Sbjct: 79 QEPI-----YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERN 129
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L+ K+ADFGLA+ L + T R F + APE YG
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 450 TEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
T KSDV+SFGI++ E+++ GR T+P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 256 VSELEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIIS 315
+ + E + + +G G G VY G + +L + L DT E+F E ++
Sbjct: 24 MDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 83
Query: 316 KIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIV 375
+I+H NL+ L G C ++V +YMP G L D + + R+++T +
Sbjct: 84 EIKHPNLVQLLGVCTLEPPF-----YIVTEYMPYGNLLDYLRECN-REEVTAVVLLYMAT 137
Query: 376 DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT 435
++ + YL K HRD+ + N L+ KVADFGL++ + G ++ T
Sbjct: 138 QISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRL-MTGDTY-TAHAGAK 192
Query: 436 F--GYLAPEYALYGQLTEKSDVYSFGIVILEL 465
F + APE Y + KSDV++FG+++ E+
Sbjct: 193 FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 111/249 (44%), Gaps = 27/249 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKIRHRNLLSLRG 327
+G+G G VY R + ++L L+ G + EVEI S +RH N+L L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 328 CCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYG 387
R +L+ +Y P GT+ + K + + I ++A ++Y H
Sbjct: 80 YF-----HDATRVYLILEYAPLGTVYRELQ---KLSRFDEQRTATYITELANALSYCH-- 129
Query: 388 LKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYG 447
+ HRDIK N+LL S K+ADFG S+ S + GT YL PE
Sbjct: 130 -SKRVIHRDIKPENLLLGSNGELKIADFGW---SVHAPSSRRDTLCGTLDYLPPEMIEGR 185
Query: 448 QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDDIFDEFIRAEG 507
EK D++S G++ E + G PF+ T + + +V+ F +F+ EG
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVG-------MPPFEAHT-YQETYRRISRVEFTFPDFV-TEG 236
Query: 508 ARAVMERFV 516
AR ++ R +
Sbjct: 237 ARDLISRLL 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNL----VAVKQI-LDLDTKGDEDFTNEVEIISK 316
ATN S + ++G G G V G L+ + VA+K + + K DF E I+ +
Sbjct: 42 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 100
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVD 376
H N++ L G S K +V +YM NG+L D+ H Q T Q ++
Sbjct: 101 FDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSL-DSFLRKHD-AQFTVIQLVGMLRG 153
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT- 435
+A G+ YL G HRD+ + NIL++S L KV+DFGL++ + T G
Sbjct: 154 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 210
Query: 436 -FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ +PE Y + T SDV+S+GIV+ E+MS
Sbjct: 211 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ G VAVK L + + F E ++ +++H+ L+ L VT
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVVT 84
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ +YM NG+L D + K LT + + +A+G+A++ +
Sbjct: 85 QEPI-----YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERN 135
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L+ K+ADFGLA+ L + T R F + APE YG
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTF 193
Query: 450 TEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
T KSDV+SFGI++ E+++ GR T+P
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP 223
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ G VAVK L + + F E ++ +++H+ L+ L VT
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVVT 88
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ +YM NG+L D + K LT + + +A+G+A++ +
Sbjct: 89 QEPI-----YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERN 139
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L+ K+ADFGLA+ L + T R F + APE YG
Sbjct: 140 YIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTF 197
Query: 450 TEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
T KSDV+SFGI++ E+++ GR T+P
Sbjct: 198 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP 227
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDY 346
G +VAVK++ + DF E+EI+ ++H N++ +G C S+G+R L+ ++
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY----SAGRRNLKLIMEF 97
Query: 347 MPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+P G+L + + HK + + + + + KG+ YL G K I HRD+ + NIL+++
Sbjct: 98 LPYGSLREYLQ-KHKER-IDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVEN 152
Query: 407 ELNAKVADFGLAKQSLEGHSHLTTRVAGT---FGYLAPEYALYGQLTEKSDVYSFGIVIL 463
E K+ DFGL K + + G F Y APE + + SDV+SFG+V+
Sbjct: 153 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLY 211
Query: 464 ELMSGRKVLDTSTSP 478
EL + ++ S SP
Sbjct: 212 ELFT---YIEKSKSP 223
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ G VAVK L + + F E ++ +++H+ L+ L VT
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVVT 78
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ +YM NG+L D + K LT + + +A+G+A++ +
Sbjct: 79 QEPI-----YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERN 129
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L+ K+ADFGLA+ L + T R F + APE YG
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTF 187
Query: 450 TEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
T KSDV+SFGI++ E+++ GR T+P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ G VAVK L + + F E ++ +++H+ L+ L VT
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVVT 83
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ +YM NG+L D + K LT + + +A+G+A++ +
Sbjct: 84 QEPI-----YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERN 134
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L+ K+ADFGLA+ L + T R F + APE YG
Sbjct: 135 YIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTF 192
Query: 450 TEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
T KSDV+SFGI++ E+++ GR T+P
Sbjct: 193 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP 222
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNL----VAVKQI-LDLDTKGDEDFTNEVEIISK 316
ATN S + ++G G G V G L+ + VA+K + + K DF E I+ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVD 376
H N++ L G S K +V +YM NG+L D+ H Q T Q ++
Sbjct: 103 FDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSL-DSFLRKHD-AQFTVIQLVGMLRG 155
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT- 435
+A G+ YL G HRD+ + NIL++S L KV+DFGL + + T G
Sbjct: 156 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI 212
Query: 436 -FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ +PE Y + T SDV+S+GIV+ E+MS
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 116/236 (49%), Gaps = 26/236 (11%)
Query: 234 HEQFVSNLQASVLPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH-GNLVA 292
HEQF + LQ V P + + F + IG+G++GIV T+R G LVA
Sbjct: 6 HEQFRAALQLVVDPGDPRSYL---------DNFIK---IGEGSTGIVCIATVRSSGKLVA 53
Query: 293 VKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTL 352
VK++ + E NEV I+ +H N++ + + D+ ++V +++ G L
Sbjct: 54 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL-----WVVMEFLEGGAL 108
Query: 353 SDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKV 412
+D ++H R + Q + + V + ++ LH G+ HRDIKS +ILL + K+
Sbjct: 109 TD--IVTHTR--MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKL 161
Query: 413 ADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+DFG Q + + GT ++APE + D++S GI+++E++ G
Sbjct: 162 SDFGFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ G VAVK L + + F E ++ +++H+ L+ L VT
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVVT 73
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ +YM NG+L D + K LT + + +A+G+A++ +
Sbjct: 74 QEPI-----YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERN 124
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ L+ K+ADFGLA+ L + T R F + APE YG
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTF 182
Query: 450 TEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
T KSDV+SFGI++ E+++ GR T+P
Sbjct: 183 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP 212
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 25/217 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G+V G R VA+K I + DE F E +++ + H L+ L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCT- 89
Query: 332 SDDSSGKRR--FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
K+R F++ +YM NG L + + R Q Q ++ DV + + YL
Sbjct: 90 ------KQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---S 138
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYG 447
HRD+ + N L++ + KV+DFGL++ L+ T+ V F + PE +Y
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE--TSSVGSKFPVRWSPPEVLMYS 196
Query: 448 QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITD 484
+ + KSD+++FG+++ E+ S K+ P++ T+
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKM------PYERFTN 227
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 25/217 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G+V G R VA+K I + DE F E +++ + H L+ L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCT- 73
Query: 332 SDDSSGKRR--FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
K+R F++ +YM NG L + + R Q Q ++ DV + + YL
Sbjct: 74 ------KQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---S 122
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYG 447
HRD+ + N L++ + KV+DFGL++ L+ T+ V F + PE +Y
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSPPEVLMYS 180
Query: 448 QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITD 484
+ + KSD+++FG+++ E+ S K+ P++ T+
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGKM------PYERFTN 211
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 25/217 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G+V G R VA+K I + DE F E +++ + H L+ L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCT- 89
Query: 332 SDDSSGKRR--FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
K+R F++ +YM NG L + + R Q Q ++ DV + + YL
Sbjct: 90 ------KQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---S 138
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYG 447
HRD+ + N L++ + KV+DFGL++ L+ T+ V F + PE +Y
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSPPEVLMYS 196
Query: 448 QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITD 484
+ + KSD+++FG+++ E+ S K+ P++ T+
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKM------PYERFTN 227
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 25/217 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G+V G R VA+K I + DE F E +++ + H L+ L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCT- 74
Query: 332 SDDSSGKRR--FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
K+R F++ +YM NG L + + R Q Q ++ DV + + YL
Sbjct: 75 ------KQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---S 123
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYG 447
HRD+ + N L++ + KV+DFGL++ L+ T+ V F + PE +Y
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSPPEVLMYS 181
Query: 448 QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITD 484
+ + KSD+++FG+++ E+ S K+ P++ T+
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKM------PYERFTN 212
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G+V G R VA+K I + DE F E +++ + H L+ L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCT- 69
Query: 332 SDDSSGKRR--FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
K+R F++ +YM NG L + + R Q Q ++ DV + + YL
Sbjct: 70 ------KQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---S 118
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYG 447
HRD+ + N L++ + KV+DFGL++ L+ T+ V F + PE +Y
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 448 QLTEKSDVYSFGIVILELMS 467
+ + KSD+++FG+++ E+ S
Sbjct: 177 KFSSKSDIWAFGVLMWEIYS 196
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 25/217 (11%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G+V G R VA+K I + DE F E +++ + H L+ L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCT- 80
Query: 332 SDDSSGKRR--FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
K+R F++ +YM NG L + + R Q Q ++ DV + + YL
Sbjct: 81 ------KQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---S 129
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYG 447
HRD+ + N L++ + KV+DFGL++ L+ T+ V F + PE +Y
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSPPEVLMYS 187
Query: 448 QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITD 484
+ + KSD+++FG+++ E+ S K+ P++ T+
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGKM------PYERFTN 218
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 42/238 (17%)
Query: 272 IGQGASGIVYKGTLRH-GNLVAVKQILD-LDTKGDEDFT-NEVEIISKIR-HRNLLSLRG 327
+G+GA GIV+K R G +VAVK+I D D T E+ I++++ H N+++L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 328 CCVTSDDSSGKRRFLVYDYMP---NGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+D + +LV+DYM + + NI L ++ ++ + K I YL
Sbjct: 77 VLRADND---RDVYLVFDYMETDLHAVIRANI--------LEPVHKQYVVYQLIKVIKYL 125
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK--------------------QSLEG 424
H G G+ HRD+K +NILL++E + KVADFGL++ ++ +
Sbjct: 126 HSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD 182
Query: 425 HSHLTTRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
+ T T Y APE L + T+ D++S G ++ E++ G+ + S++ QL
Sbjct: 183 DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 106/200 (53%), Gaps = 16/200 (8%)
Query: 272 IGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLLSLRGCC 329
+G+G+ G VYK + G +VA+KQ+ + D ++ E+ I+ + +++ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQV---PVESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
+ D ++V +Y G++SD I + + K LT + I+ KG+ YLH+ K
Sbjct: 94 FKNTD-----LWIVMEYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQL 449
HRDIK+ NILL++E +AK+ADFG+A Q + + V GT ++APE
Sbjct: 147 ---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEIGY 202
Query: 450 TEKSDVYSFGIVILELMSGR 469
+D++S GI +E+ G+
Sbjct: 203 NCVADIWSLGITAIEMAEGK 222
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ G + VAVK L T + F E ++ ++H L+ L VT
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVK-TLKPGTMSVQAFLEEANLMKTLQHDKLVRLY-AVVT 78
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
++ +++ +YM G+L D + K L P+ +A+G+AY+ +
Sbjct: 79 REEPI----YIITEYMAKGSLLDFLKSDEGGKVLL-PKLIDFSAQIAEGMAYIE---RKN 130
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ N+L+ L K+ADFGLA+ +E + + T R F + APE +G
Sbjct: 131 YIHRDLRAANVLVSESLMCKIADFGLAR-VIEDNEY-TAREGAKFPIKWTAPEAINFGCF 188
Query: 450 TEKSDVYSFGIVILELMSGRKV 471
T KSDV+SFGI++ E+++ K+
Sbjct: 189 TIKSDVWSFGILLYEIVTYGKI 210
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 110/229 (48%), Gaps = 36/229 (15%)
Query: 274 QGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIIS--KIRHRNLLSL-----R 326
+G G V+K L + VAVK I + K + + NE E+ S ++H N+L R
Sbjct: 34 RGRFGCVWKAQLLN-EYVAVK-IFPIQDK--QSWQNEYEVYSLPGMKHENILQFIGAEKR 89
Query: 327 GCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHY 386
G V D +L+ + G+LSD + K ++W + I +A+G+AYLH
Sbjct: 90 GTSVDVD------LWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHE 139
Query: 387 -------GLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR-VAGTFGY 438
G KP I HRDIKS N+LL + L A +ADFGLA + G S T GT Y
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY 199
Query: 439 LAPEYALYGQLTEKS------DVYSFGIVILELMSGRKVLDTSTSPFQL 481
+APE L G + + D+Y+ G+V+ EL S D + L
Sbjct: 200 MAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML 247
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ G VAVK L + + F E ++ +++H+ L+ L VT
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVVT 74
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ +YM NG+L D + K LT + + +A+G+A++ +
Sbjct: 75 QEPI-----YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE---ERN 125
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HR++++ NIL+ L+ K+ADFGLA+ L + T R F + APE YG
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTF 183
Query: 450 TEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
T KSDV+SFGI++ E+++ GR T+P
Sbjct: 184 TIKSDVWSFGILLTEIVTHGRIPYPGMTNP 213
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 269 NNLIGQGASGIVYKGTLR----HGNLVAVKQI-LDLDTKGDEDFTNEVEIISKIRHRNLL 323
+IG G SG V G LR VA+K + + DF +E I+ + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
L G + G+ +V +YM NG+L D +H Q T Q ++ V G+ Y
Sbjct: 114 RLEGVV-----TRGRLAMIVTEYMENGSL-DTFLRTHD-GQFTIMQLVGMLRGVGAGMRY 166
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT--FGYLAP 441
L G HRD+ + N+L+DS L KV+DFGL++ + T G + AP
Sbjct: 167 LS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAP 223
Query: 442 EYALYGQLTEKSDVYSFGIVILELMS 467
E + + SDV+SFG+V+ E+++
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 269 NNLIGQGASGIVYKGTLR----HGNLVAVKQI-LDLDTKGDEDFTNEVEIISKIRHRNLL 323
+IG G G V G L+ VA+K + + K DF E I+ + H N++
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
L G + GK +V ++M NG L + + Q T Q ++ +A G+ Y
Sbjct: 108 HLEGVV-----TRGKPVMIVIEFMENGAL--DAFLRKHDGQFTVIQLVGMLRGIAAGMRY 160
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAP 441
L G HRD+ + NIL++S L KV+DFGL++ + + T G + AP
Sbjct: 161 L---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAP 217
Query: 442 EYALYGQLTEKSDVYSFGIVILELMS 467
E Y + T SDV+S+GIV+ E+MS
Sbjct: 218 EAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 269 NNLIGQGASGIVYKGTLR----HGNLVAVKQI-LDLDTKGDEDFTNEVEIISKIRHRNLL 323
+IG G SG V G LR VA+K + + DF +E I+ + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
L G + G+ +V +YM NG+L D +H Q T Q ++ V G+ Y
Sbjct: 114 RLEGVV-----TRGRLAMIVTEYMENGSL-DTFLRTHD-GQFTIMQLVGMLRGVGAGMRY 166
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT--FGYLAP 441
L G HRD+ + N+L+DS L KV+DFGL++ + T G + AP
Sbjct: 167 LS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP 223
Query: 442 EYALYGQLTEKSDVYSFGIVILELMS 467
E + + SDV+SFG+V+ E+++
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 37/219 (16%)
Query: 272 IGQGASGIVYKGTL------RHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
+G+GA G V+ + LVAVK + D +DF E E+++ ++H +++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLS--------DNISISHKR--KQLTWPQRKKIIV 375
G CV D +V++YM +G L+ D + ++ +LT Q I
Sbjct: 81 YGVCVEGDPL-----IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 376 DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ-------SLEGHSHL 428
+A G+ YL HRD+ + N L+ L K+ DFG+++ + GH+ L
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 192
Query: 429 TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
R ++ PE +Y + T +SDV+S G+V+ E+ +
Sbjct: 193 PIR------WMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYM 347
G LVAVKQ+ DF E++I+ + ++ RG S + LV +Y+
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR---LVMEYL 108
Query: 348 PNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSE 407
P+G L D + R +L + + KG+ YL G + + HRD+ + NIL++SE
Sbjct: 109 PSGCLRDFLQ--RHRARLDASRLLLYSSQICKGMEYL--GSRRCV-HRDLAARNILVESE 163
Query: 408 LNAKVADFGLAKQSLEGHSHLTTRVAGT--FGYLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ K+ADFGLAK + R G + APE + +SDV+SFG+V+ EL
Sbjct: 164 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
Query: 466 MSGRKVLDTSTSP 478
+ D S SP
Sbjct: 224 FT---YCDKSCSP 233
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 105/202 (51%), Gaps = 19/202 (9%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
IG+G G V G R GN VAVK I + T + F E +++++RH NL+ L G V
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV- 69
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
++ G ++V +YM G+L D + S R L K +DV + + YL
Sbjct: 70 -EEKGG--LYIVTEYMAKGSLVDYLR-SRGRSVLGGDCLLKFSLDVCEAMEYLEGN---N 122
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+ + N+L+ + AKV+DFGL K++ +T+ G + APE +
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTKEA------SSTQDTGKLPVKWTAPEALREKKF 176
Query: 450 TEKSDVYSFGIVILELMSGRKV 471
+ KSDV+SFGI++ E+ S +V
Sbjct: 177 STKSDVWSFGILLWEIYSFGRV 198
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 104/202 (51%), Gaps = 19/202 (9%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
IG+G G V G R GN VAVK I + T + F E +++++RH NL+ L G V
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV- 75
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
++ G ++V +YM G+L D + S R L K +DV + + YL
Sbjct: 76 -EEKGG--LYIVTEYMAKGSLVDYLR-SRGRSVLGGDCLLKFSLDVCEAMEYLEGN---N 128
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+ + N+L+ + AKV+DFGL K++ +T+ G + APE
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLTKEA------SSTQDTGKLPVKWTAPEALREAAF 182
Query: 450 TEKSDVYSFGIVILELMSGRKV 471
+ KSDV+SFGI++ E+ S +V
Sbjct: 183 STKSDVWSFGILLWEIYSFGRV 204
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNL----VAVKQI-LDLDTKGDEDFTNEVEIISK 316
ATN S + ++G G G V G L+ + VA+K + + K DF E I+ +
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVD 376
H N++ L G S K +V + M NG+L D+ H Q T Q ++
Sbjct: 74 FDHPNIIRLEGVVTKS-----KPVMIVTEXMENGSL-DSFLRKHD-AQFTVIQLVGMLRG 126
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT- 435
+A G+ YL G HRD+ + NIL++S L KV+DFGL++ + T G
Sbjct: 127 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 436 -FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ +PE Y + T SDV+S+GIV+ E+MS
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYM 347
G LVAVKQ+ DF E++I+ + ++ RG S + LV +Y+
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR---LVMEYL 96
Query: 348 PNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSE 407
P+G L D + R +L + + KG+ YL G + + HRD+ + NIL++SE
Sbjct: 97 PSGCLRDFLQ--RHRARLDASRLLLYSSQICKGMEYL--GSRRCV-HRDLAARNILVESE 151
Query: 408 LNAKVADFGLAKQSLEGHSHLTTRVAGT--FGYLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ K+ADFGLAK + R G + APE + +SDV+SFG+V+ EL
Sbjct: 152 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
Query: 466 MSGRKVLDTSTSP 478
+ D S SP
Sbjct: 212 FT---YCDKSCSP 221
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 105/202 (51%), Gaps = 19/202 (9%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
IG+G G V G R GN VAVK I + T + F E +++++RH NL+ L G V
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV- 256
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
++ G ++V +YM G+L D + S R L K +DV + + YL
Sbjct: 257 -EEKGG--LYIVTEYMAKGSLVDYLR-SRGRSVLGGDCLLKFSLDVCEAMEYLEGN---N 309
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+ + N+L+ + AKV+DFGL K++ +T+ G + APE +
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEA------SSTQDTGKLPVKWTAPEALREKKF 363
Query: 450 TEKSDVYSFGIVILELMSGRKV 471
+ KSDV+SFGI++ E+ S +V
Sbjct: 364 STKSDVWSFGILLWEIYSFGRV 385
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 105/202 (51%), Gaps = 19/202 (9%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
IG+G G V G R GN VAVK I + T + F E +++++RH NL+ L G V
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV- 84
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
++ G ++V +YM G+L D + S R L K +DV + + YL
Sbjct: 85 -EEKGG--LYIVTEYMAKGSLVDYLR-SRGRSVLGGDCLLKFSLDVCEAMEYLE---GNN 137
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+ + N+L+ + AKV+DFGL K++ +T+ G + APE +
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLTKEA------SSTQDTGKLPVKWTAPEALREKKF 191
Query: 450 TEKSDVYSFGIVILELMSGRKV 471
+ KSDV+SFGI++ E+ S +V
Sbjct: 192 STKSDVWSFGILLWEIYSFGRV 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYM 347
G LVAVKQ+ DF E++I+ + ++ RG S + LV +Y+
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR---LVMEYL 95
Query: 348 PNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSE 407
P+G L D + R +L + + KG+ YL G + + HRD+ + NIL++SE
Sbjct: 96 PSGCLRDFLQ--RHRARLDASRLLLYSSQICKGMEYL--GSRRCV-HRDLAARNILVESE 150
Query: 408 LNAKVADFGLAKQSLEGHSHLTTRVAGT--FGYLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ K+ADFGLAK + R G + APE + +SDV+SFG+V+ EL
Sbjct: 151 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
Query: 466 MSGRKVLDTSTSP 478
+ D S SP
Sbjct: 211 FT---YCDKSCSP 220
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 15/198 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G+V G R VA+K I + DE F E +++ + H L+ L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCT- 74
Query: 332 SDDSSGKRR--FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
K+R F++ +YM NG L + + R Q Q ++ DV + + YL
Sbjct: 75 ------KQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---S 123
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQL 449
HRD+ + N L++ + KV+DFGL++ L+ + + PE +Y +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKF 183
Query: 450 TEKSDVYSFGIVILELMS 467
+ KSD+++FG+++ E+ S
Sbjct: 184 SSKSDIWAFGVLMWEIYS 201
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNL----VAVKQI-LDLDTKGDEDFTNEVEIISK 316
ATN S + ++G G G V G L+ + VA+K + + K DF E I+ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVD 376
H N++ L G S K +V + M NG+L D+ H Q T Q ++
Sbjct: 103 FDHPNIIRLEGVVTKS-----KPVMIVTEXMENGSL-DSFLRKHD-AQFTVIQLVGMLRG 155
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT- 435
+A G+ YL G HRD+ + NIL++S L KV+DFGL++ + T G
Sbjct: 156 IASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 436 -FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ +PE Y + T SDV+S+GIV+ E+MS
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 16/201 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ T VAVK + + E F E ++ ++H L+ L VT
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVK-TMKPGSMSVEAFLAEANVMKTLQHDKLVKLH-AVVT 80
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ ++M G+L D + KQ P+ +A+G+A++ +
Sbjct: 81 KEPI-----YIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIE---QRN 131
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ + L K+ADFGLA+ +E + + T R F + APE +G
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLAR-VIEDNEY-TAREGAKFPIKWTAPEAINFGSF 189
Query: 450 TEKSDVYSFGIVILELMS-GR 469
T KSDV+SFGI+++E+++ GR
Sbjct: 190 TIKSDVWSFGILLMEIVTYGR 210
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRHGNL----VAVKQI-LDLDTKGDEDFTNEVEIISK 316
ATN S + ++G G G V G L+ + VA+K + + K DF E I+ +
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVD 376
H N++ L G S K +V + M NG+L D+ H Q T Q ++
Sbjct: 103 FDHPNIIRLEGVVTKS-----KPVMIVTEXMENGSL-DSFLRKHD-AQFTVIQLVGMLRG 155
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT- 435
+A G+ YL G HRD+ + NIL++S L KV+DFGL++ + T G
Sbjct: 156 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 436 -FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ +PE Y + T SDV+S+GIV+ E+MS
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 34/213 (15%)
Query: 270 NLIGQGASGIVYKGT-LRHGNLVAVK---QILDLDT--KGDEDFTNEVEIISKIRHRNLL 323
++G GA G VYKG + G V + +IL+ T K + +F +E I++ + H +L+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ-------LTWPQRKKIIVD 376
L G C++ LV MP+G L + + H+ K L W V
Sbjct: 104 RLLGVCLSPTIQ------LVTQLMPHGCLLEYV---HEHKDNIGSQLLLNW------CVQ 148
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF 436
+AKG+ YL + + HRD+ + N+L+ S + K+ DFGLA+ LEG G
Sbjct: 149 IAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLAR-LLEGDEKEYNADGGKM 204
Query: 437 --GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E Y + T +SDV+S+G+ I ELM+
Sbjct: 205 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 34/213 (15%)
Query: 270 NLIGQGASGIVYKGT-LRHGNLVAVK---QILDLDT--KGDEDFTNEVEIISKIRHRNLL 323
++G GA G VYKG + G V + +IL+ T K + +F +E I++ + H +L+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ-------LTWPQRKKIIVD 376
L G C++ LV MP+G L + + H+ K L W V
Sbjct: 81 RLLGVCLSPTIQ------LVTQLMPHGCLLEYV---HEHKDNIGSQLLLNW------CVQ 125
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF 436
+AKG+ YL + + HRD+ + N+L+ S + K+ DFGLA+ LEG G
Sbjct: 126 IAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLAR-LLEGDEKEYNADGGKM 181
Query: 437 --GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E Y + T +SDV+S+G+ I ELM+
Sbjct: 182 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 20/204 (9%)
Query: 271 LIGQGASGIVYKGTLR-HGNLVAVKQILDLDTKGDEDFT--NEVEIISKIRHRNLLSLRG 327
++G+G+ G V K R AVK I K + T EVE++ K+ H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 328 CCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYG 387
+ D SS ++V + G L D I KRK+ + +II V GI Y+H
Sbjct: 89 --ILEDSSSF---YIVGELYTGGELFDEII---KRKRFSEHDAARIIKQVFSGITYMH-- 138
Query: 388 LKPGIYHRDIKSTNILLDS---ELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
K I HRD+K NILL+S + + K+ DFGL+ + ++ + R+ GT Y+APE
Sbjct: 139 -KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI-GTAYYIAPE-V 194
Query: 445 LYGQLTEKSDVYSFGIVILELMSG 468
L G EK DV+S G+++ L+SG
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 20/204 (9%)
Query: 271 LIGQGASGIVYKGTLR-HGNLVAVKQILDLDTKGDEDFT--NEVEIISKIRHRNLLSLRG 327
++G+G+ G V K R AVK I K + T EVE++ K+ H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 328 CCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYG 387
+ D SS ++V + G L D I KRK+ + +II V GI Y+H
Sbjct: 89 --ILEDSSSF---YIVGELYTGGELFDEII---KRKRFSEHDAARIIKQVFSGITYMH-- 138
Query: 388 LKPGIYHRDIKSTNILLDS---ELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
K I HRD+K NILL+S + + K+ DFGL+ + ++ + R+ GT Y+APE
Sbjct: 139 -KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI-GTAYYIAPE-V 194
Query: 445 LYGQLTEKSDVYSFGIVILELMSG 468
L G EK DV+S G+++ L+SG
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ G + VAVK L T + F E ++ ++H L+ L VT
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVK-TLKPGTMSVQAFLEEANLMKTLQHDKLVRLY-AVVT 77
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
++ +++ ++M G+L D + K L P+ +A+G+AY+ +
Sbjct: 78 KEEPI----YIITEFMAKGSLLDFLKSDEGGKVLL-PKLIDFSAQIAEGMAYIE---RKN 129
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ N+L+ L K+ADFGLA+ +E + + T R F + APE +G
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLAR-VIEDNEY-TAREGAKFPIKWTAPEAINFGCF 187
Query: 450 TEKSDVYSFGIVILELMSGRKV 471
T KS+V+SFGI++ E+++ K+
Sbjct: 188 TIKSNVWSFGILLYEIVTYGKI 209
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R++++ + ++
Sbjct: 67 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISS 120
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ L T F
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTFTAHAGAKFPIK 175
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R+++ + ++
Sbjct: 74 PNLVQLLGVCTREPPF-----YIIIEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISS 127
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T F
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIK 182
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R++++ + ++
Sbjct: 69 PNLVQLLGVCTREPPF-----YIIIEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISS 122
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T F
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIK 177
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 20/204 (9%)
Query: 271 LIGQGASGIVYKGTLR-HGNLVAVKQILDLDTKGDEDFT--NEVEIISKIRHRNLLSLRG 327
++G+G+ G V K R AVK I K + T EVE++ K+ H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL-- 86
Query: 328 CCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYG 387
+ D SS ++V + G L D I KRK+ + +II V GI Y+H
Sbjct: 87 FEILEDSSSF---YIVGELYTGGELFDEII---KRKRFSEHDAARIIKQVFSGITYMH-- 138
Query: 388 LKPGIYHRDIKSTNILLDS---ELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
K I HRD+K NILL+S + + K+ DFGL+ + ++ + R+ GT Y+APE
Sbjct: 139 -KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI-GTAYYIAPE-V 194
Query: 445 LYGQLTEKSDVYSFGIVILELMSG 468
L G EK DV+S G+++ L+SG
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 40/222 (18%)
Query: 272 IGQGASGIVYKGT------LRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
+G+GA G V+ + LVAVK + D +DF E E+++ ++H +++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISI-------------SHKRKQLTWPQRKK 372
G C G +V++YM +G L+ + + +L Q
Sbjct: 83 YGVC-----GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 373 IIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ-------SLEGH 425
I +A G+ YL HRD+ + N L+ + L K+ DFG+++ + GH
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 426 SHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ L R ++ PE +Y + T +SDV+SFG+++ E+ +
Sbjct: 195 TMLPIR------WMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R++++ + ++
Sbjct: 74 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISS 127
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T F
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIK 182
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R+++ + ++
Sbjct: 74 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISS 127
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T F
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIK 182
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 256 VSELEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIIS 315
+ + E + + +G G G VY+G + +L + L DT E+F E ++
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 62
Query: 316 KIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIV 375
+I+H NL+ L G C +++ ++M G L D + + R++++ +
Sbjct: 63 EIKHPNLVQLLGVCTREPPF-----YIIIEFMTYGNLLDYLRECN-RQEVSAVVLLYMAT 116
Query: 376 DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT 435
++ + YL K HRD+ + N L+ KVADFGL++ L T
Sbjct: 117 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTXTAHAGAK 171
Query: 436 F--GYLAPEYALYGQLTEKSDVYSFGIVILEL 465
F + APE Y + + KSDV++FG+++ E+
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 95/193 (49%), Gaps = 13/193 (6%)
Query: 288 GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYM 347
G LVAVKQ+ DF E++I+ + ++ RG V+ + R LV +Y+
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRG--VSYGPGRPELR-LVMEYL 92
Query: 348 PNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSE 407
P+G L D + R +L + + KG+ YL G + + HRD+ + NIL++SE
Sbjct: 93 PSGCLRD--FLQRHRARLDASRLLLYSSQICKGMEYL--GSRRCV-HRDLAARNILVESE 147
Query: 408 LNAKVADFGLAKQSLEGHSHLTTRVAGT--FGYLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ K+ADFGLAK R G + APE + +SDV+SFG+V+ EL
Sbjct: 148 AHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
Query: 466 MSGRKVLDTSTSP 478
+ D S SP
Sbjct: 208 FT---YCDKSCSP 217
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R++++ + ++
Sbjct: 69 PNLVQLLGVCTREPPF-----YIIIEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISS 122
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T F
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIK 177
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 13/210 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R+++ + ++
Sbjct: 69 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISS 122
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T F
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIK 177
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ APE Y + + KSDV++FG+++ E+ +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R++++ + ++
Sbjct: 69 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISS 122
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T F
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIK 177
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 13 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 72
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R+++ + ++
Sbjct: 73 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISS 126
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T F
Sbjct: 127 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIK 181
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEI 209
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 13/210 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R++++ + ++
Sbjct: 69 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISS 122
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T F
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIK 177
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ APE Y + + KSDV++FG+++ E+ +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R+++ + ++
Sbjct: 69 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISS 122
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T F
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIK 177
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 115/228 (50%), Gaps = 16/228 (7%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTN-EVEIISKIR 318
EQ ++ +IG G+ G+V++ L + VA+K++L D+ F N E++I+ ++
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVK 90
Query: 319 HRNLLSLRGCCVTSDDSSGKRRF-LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
H N++ L+ ++ D + LV +Y+P + + ++ + K + +
Sbjct: 91 HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL 150
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTF 436
+ +AY+H GI HRDIK N+LLD K+ DFG AK + G +++ + +
Sbjct: 151 LRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX-ICSRY 206
Query: 437 GYLAPEYALYG--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE ++G T D++S G V+ ELM G+ + + QL+
Sbjct: 207 -YRAPEL-IFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLV 252
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 16/201 (7%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ T VAVK + + E F E ++ ++H L+ L VT
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVK-TMKPGSMSVEAFLAEANVMKTLQHDKLVKLH-AVVT 253
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ ++M G+L D + KQ P+ +A+G+A++ +
Sbjct: 254 KEPI-----YIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIE---QRN 304
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ + L K+ADFGLA+ +E + + T R F + APE +G
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLAR-VIEDNEY-TAREGAKFPIKWTAPEAINFGSF 362
Query: 450 TEKSDVYSFGIVILELMS-GR 469
T KSDV+SFGI+++E+++ GR
Sbjct: 363 TIKSDVWSFGILLMEIVTYGR 383
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 112/231 (48%), Gaps = 37/231 (16%)
Query: 273 GQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISK--IRHRNLLSL----- 325
+G G V+K L + + VAVK I L K + + +E EI S ++H NLL
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVK-IFPLQDK--QSWQSEREIFSTPGMKHENLLQFIAAEK 79
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
RG + + +L+ + G+L+D + K +TW + + +++G++YLH
Sbjct: 80 RGSNLEVE------LWLITAFHDKGSLTDYL----KGNIITWNELCHVAETMSRGLSYLH 129
Query: 386 Y--------GLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR-VAGTF 436
G KP I HRD KS N+LL S+L A +ADFGLA + G T GT
Sbjct: 130 EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTR 189
Query: 437 GYLAPEYALYGQLTEKS------DVYSFGIVILELMSGRKVLDTSTSPFQL 481
Y+APE L G + + D+Y+ G+V+ EL+S K D + L
Sbjct: 190 RYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYML 239
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R+++ + ++
Sbjct: 74 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISS 127
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ L T F
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTXTAHAGAKFPIK 182
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R+++ + ++
Sbjct: 74 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISS 127
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T F
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIK 182
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R++++ + ++
Sbjct: 67 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISS 120
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ L T F
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTXTAHAGAKFPIK 175
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R+++ + ++
Sbjct: 71 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISS 124
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T F
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIK 179
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 81
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R+++ + ++
Sbjct: 82 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISS 135
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T F
Sbjct: 136 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTY-TAHAGAKFPIK 190
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEI 218
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 69
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R+++ + ++
Sbjct: 70 PNLVQLLGVCTREPPF-----YIIIEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISS 123
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ L T F
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTXTAHAGAKFPIK 178
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ APE Y + + KSDV++FG+++ E+ +
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R+++ + ++
Sbjct: 71 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISS 124
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--G 437
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T F
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIK 179
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 271 LIGQGASGIVYKGTLRHGNL----VAVKQI-LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
+IG G G V G L+ VA+K + + K DF E I+ + H N++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
G S K +V +YM NG+L + + Q T Q ++ ++ G+ YL
Sbjct: 89 EGVVTKS-----KPVMIVTEYMENGSL--DTFLKKNDGQFTVIQLVGMLRGISAGMKYLS 141
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT--FGYLAPEY 443
G HRD+ + NIL++S L KV+DFGL++ + T G + APE
Sbjct: 142 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA 198
Query: 444 ALYGQLTEKSDVYSFGIVILELMS 467
+ + T SDV+S+GIV+ E++S
Sbjct: 199 IAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 69
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R+++ + ++
Sbjct: 70 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISS 123
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT---F 436
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T AG
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY--TAPAGAKFPI 177
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
E + + +G G G VY+G + +L + L DT E+F E ++ +I+H
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
NL+ L G C +++ ++M G L D + + R+++ + ++
Sbjct: 71 PNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISS 124
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT---F 436
+ YL K HRD+ + N L+ KVADFGL++ + G ++ T AG
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY--TAPAGAKFPI 178
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILEL 465
+ APE Y + + KSDV++FG+++ E+
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 119/249 (47%), Gaps = 21/249 (8%)
Query: 272 IGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDFT-NEVEIISKIRHRNLLSLRGCC 329
IG+G++GIV +H G VAVK ++DL + + NEV I+ +H N++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVK-MMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
+ G+ +++ +++ G L+D +S + +L Q + V + +AYLH
Sbjct: 112 LV-----GEELWVLMEFLQGGALTDIVS----QVRLNEEQIATVCEAVLQALAYLH---A 159
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQL 449
G+ HRDIKS +ILL + K++DFG Q + + GT ++APE
Sbjct: 160 QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQ-ISKDVPKRKXLVGTPYWMAPEVISRSLY 218
Query: 450 TEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW----AWVLAKSGKVDDIFDEFIRA 505
+ D++S GI+++E++ G S SP Q + L S KV + +F+
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPPY-FSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLER 277
Query: 506 EGARAVMER 514
R ER
Sbjct: 278 MLVRDPQER 286
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 266 FSQNNLIGQGASGIVYKGTLR-HGNLVAVKQILDLDTKGDEDFT-NEVEIISKIRHRNLL 323
++Q IG+GA G+V VA+K+I + + T E++I+ + RH N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
+R S + + ++V D M ++ K +QL+ + + +G+ Y
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLM-----ETDLYKLLKSQQLSNDHICYFLYQILRGLKY 159
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAP 441
+H + HRD+K +N+L+++ + K+ DFGLA+ + H H T T Y AP
Sbjct: 160 IHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 442 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
E L + KS D++S G ++ E++S R +
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 96/186 (51%), Gaps = 19/186 (10%)
Query: 288 GNLVAVKQILDLDTKGDE--DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYD 345
G +VA+K I+D +T G + E+E + +RH+++ L T++ + F+V +
Sbjct: 35 GEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN-----KIFMVLE 88
Query: 346 YMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLD 405
Y P G L D I IS R L+ + + + + +AY+H G HRD+K N+L D
Sbjct: 89 YCPGGELFDYI-ISQDR--LSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFD 142
Query: 406 SELNAKVADFGL-AKQSLEGHSHLTTRVAGTFGYLAPEYALYGQ--LTEKSDVYSFGIVI 462
K+ DFGL AK HL T G+ Y APE + G+ L ++DV+S GI++
Sbjct: 143 EYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPE-LIQGKSYLGSEADVWSMGILL 200
Query: 463 LELMSG 468
LM G
Sbjct: 201 YVLMCG 206
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 108/231 (46%), Gaps = 24/231 (10%)
Query: 247 PNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLR----HGNLVAVKQILDLDT- 301
PN + F E++ + Q +IG G G V G L+ VA+K + T
Sbjct: 19 PNEAVREF-AKEIDISCVKIEQ--VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE 75
Query: 302 KGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK 361
K DF +E I+ + H N++ L G S ++ ++M NG+L +
Sbjct: 76 KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV-----MIITEFMENGSLDS--FLRQN 128
Query: 362 RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS 421
Q T Q ++ +A G+ YL HRD+ + NIL++S L KV+DFGL++
Sbjct: 129 DGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSR-F 184
Query: 422 LEGHSHLTTRVAGTFG-----YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
LE + T + G + APE Y + T SDV+S+GIV+ E+MS
Sbjct: 185 LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 26/201 (12%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G V+ T VAVK + + E F E ++ ++H L+ L VT
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVK-TMKPGSMSVEAFLAEANVMKTLQHDKLVKLH-AVVT 247
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+ +++ ++M G+L D + KQ P+ +A+G+A++ +
Sbjct: 248 KEPI-----YIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIE---QRN 298
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HRD+++ NIL+ + L K+ADFGLA RV F + APE +G
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLA------------RVGAKFPIKWTAPEAINFGSF 346
Query: 450 TEKSDVYSFGIVILELMS-GR 469
T KSDV+SFGI+++E+++ GR
Sbjct: 347 TIKSDVWSFGILLMEIVTYGR 367
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 32/224 (14%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLRHGNL---VAVKQILDLDTKGDE-DFTNEVEIISKIRH 319
N ++IG+G G V K ++ L A+K++ + +K D DF E+E++ K+ H
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 320 R-NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISH-------------KRKQL 365
N+++L G C +L +Y P+G L D + S L
Sbjct: 75 HPNIINLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 366 TWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH 425
+ Q DVA+G+ YL + HRD+ + NIL+ AK+ADFGL++ G
Sbjct: 130 SSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR----GQ 182
Query: 426 SHLTTRVAGTF--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ G ++A E Y T SDV+S+G+++ E++S
Sbjct: 183 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 35/219 (15%)
Query: 272 IGQGASGIVYKGTLRH------GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
+G+GA G V+ + LVAVK + + +DF E E+++ ++H++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ-------------LTWPQRKK 372
G C + G+ +V++YM +G L+ + SH L Q
Sbjct: 86 FGVC-----TEGRPLLMVFEYMRHGDLNRFLR-SHGPDAKLLAGGEDVAPGPLGLGQLLA 139
Query: 373 IIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRV 432
+ VA G+ YL GL HRD+ + N L+ L K+ DFG+++ + +S RV
Sbjct: 140 VASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSR---DIYSTDYYRV 193
Query: 433 AGT----FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
G ++ PE LY + T +SDV+SFG+V+ E+ +
Sbjct: 194 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 32/224 (14%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLRHGNL---VAVKQILDLDTKGDE-DFTNEVEIISKIRH 319
N ++IG+G G V K ++ L A+K++ + +K D DF E+E++ K+ H
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 320 R-NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISH-------------KRKQL 365
N+++L G C +L +Y P+G L D + S L
Sbjct: 85 HPNIINLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 366 TWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH 425
+ Q DVA+G+ YL + HRD+ + NIL+ AK+ADFGL++ G
Sbjct: 140 SSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR----GQ 192
Query: 426 SHLTTRVAGTF--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ G ++A E Y T SDV+S+G+++ E++S
Sbjct: 193 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 25/227 (11%)
Query: 249 SGAKWFHVSELEQATNGFSQNNLIGQGA-SGIVYKGTLRHGNLVAVKQILDLDTKGDE-D 306
G +W + E + + +++G GA S ++ R LVA+K I +G E
Sbjct: 6 EGPRW---KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS 62
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDD--SSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
NE+ ++ KI+H N+++L DD SG +L+ + G L D I ++
Sbjct: 63 MENEIAVLHKIKHPNIVAL-------DDIYESGGHLYLIMQLVSGGELFDRIV---EKGF 112
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNIL---LDSELNAKVADFGLAKQS 421
T ++I V + YLH GI HRD+K N+L LD + ++DFGL+K
Sbjct: 113 YTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-- 167
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+E + + GT GY+APE ++ D +S G++ L+ G
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 272 IGQGASGIVYKGT-LRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCV 330
IGQGASG VY + G VA++Q+ E NE+ ++ + ++ N+++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
D+ ++V +Y+ G+L+D ++ + Q + + + + +LH
Sbjct: 88 VGDE-----LWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN--- 135
Query: 391 GIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLT 450
+ HRDIKS NILL + + K+ DFG Q S +T V GT ++APE
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYG 194
Query: 451 EKSDVYSFGIVILELMSGR 469
K D++S GI+ +E++ G
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 25/227 (11%)
Query: 249 SGAKWFHVSELEQATNGFSQNNLIGQGA-SGIVYKGTLRHGNLVAVKQILDLDTKGDE-D 306
G +W + E + + +++G GA S ++ R LVA+K I +G E
Sbjct: 6 EGPRW---KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS 62
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDD--SSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
NE+ ++ KI+H N+++L DD SG +L+ + G L D I ++
Sbjct: 63 MENEIAVLHKIKHPNIVAL-------DDIYESGGHLYLIMQLVSGGELFDRIV---EKGF 112
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNIL---LDSELNAKVADFGLAKQS 421
T ++I V + YLH GI HRD+K N+L LD + ++DFGL+K
Sbjct: 113 YTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-- 167
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+E + + GT GY+APE ++ D +S G++ L+ G
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 271 LIGQGASGIVYKGTLR----HGNLVAVKQILDLDT-KGDEDFTNEVEIISKIRHRNLLSL 325
+IG G G V +G L+ + VA+K + T + +F +E I+ + H N++ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
G S ++ ++M NG L + ++ Q T Q ++ +A G+ YL
Sbjct: 83 EGVVTNSMPV-----MILTEFMENGALDSFLRLNDG--QFTVIQLVGMLRGIASGMRYLA 135
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG-----YLA 440
+ HRD+ + NIL++S L KV+DFGL++ LE +S T + G + A
Sbjct: 136 ---EMSYVHRDLAARNILVNSNLVCKVSDFGLSR-FLEENSSDPTETSSLGGKIPIRWTA 191
Query: 441 PEYALYGQLTEKSDVYSFGIVILELMS 467
PE + + T SD +S+GIV+ E+MS
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 25/227 (11%)
Query: 249 SGAKWFHVSELEQATNGFSQNNLIGQGA-SGIVYKGTLRHGNLVAVKQILDLDTKGDE-D 306
G +W + E + + +++G GA S ++ R LVA+K I +G E
Sbjct: 6 EGPRW---KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS 62
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDD--SSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
NE+ ++ KI+H N+++L DD SG +L+ + G L D I ++
Sbjct: 63 MENEIAVLHKIKHPNIVAL-------DDIYESGGHLYLIMQLVSGGELFDRIV---EKGF 112
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNIL---LDSELNAKVADFGLAKQS 421
T ++I V + YLH GI HRD+K N+L LD + ++DFGL+K
Sbjct: 113 YTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-- 167
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+E + + GT GY+APE ++ D +S G++ L+ G
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 35/219 (15%)
Query: 272 IGQGASGIVYKGTLRH------GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
+G+GA G V+ + LVAVK + + +DF E E+++ ++H++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ-------------LTWPQRKK 372
G C + G+ +V++YM +G L+ + SH L Q
Sbjct: 80 FGVC-----TEGRPLLMVFEYMRHGDLNRFLR-SHGPDAKLLAGGEDVAPGPLGLGQLLA 133
Query: 373 IIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRV 432
+ VA G+ YL GL HRD+ + N L+ L K+ DFG+++ + +S RV
Sbjct: 134 VASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSR---DIYSTDYYRV 187
Query: 433 AGT----FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
G ++ PE LY + T +SDV+SFG+V+ E+ +
Sbjct: 188 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 266 FSQNNLIGQGA-SGIVYKGTLRHGNLVAVKQILDLDTKGDED-FTNEVEIISKIRHRNLL 323
F +G GA S +V G L AVK I KG E NE+ ++ KI+H N++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
+L S +LV + G L D I ++ T +I V + Y
Sbjct: 84 ALEDIY-----ESPNHLYLVMQLVSGGELFDRIV---EKGFYTEKDASTLIRQVLDAVYY 135
Query: 384 LHYGLKPGIYHRDIKSTNILL---DSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLA 440
LH + GI HRD+K N+L D E ++DFGL+K +EG + + GT GY+A
Sbjct: 136 LH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK--MEGKGDVMSTACGTPGYVA 190
Query: 441 PEYALYGQLTEKSDVYSFGIVILELMSG 468
PE ++ D +S G++ L+ G
Sbjct: 191 PEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 16/234 (6%)
Query: 255 HVSELEQATNGFSQNNLIGQGASGIVYKG-TLRHGNLVAVKQILDLDTKGDEDF----TN 309
H++ ++ + ++G G V+ LR VAVK +L D D F
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVK-VLRADLARDPSFYLRFRR 61
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E + + + H ++++ ++ +G ++V +Y+ TL D I H +T +
Sbjct: 62 EAQNAAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRD---IVHTEGPMTPKR 117
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHL- 428
++I D + + + H GI HRD+K NIL+ + KV DFG+A+ + + +
Sbjct: 118 AIEVIADACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVX 174
Query: 429 -TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
T V GT YL+PE A + +SDVYS G V+ E+++G T SP +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPVSV 227
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 17/219 (7%)
Query: 272 IGQGASGIVYKGTLR-HGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSLRG 327
IG GA G+V R G VA+K+I D+ T E++I+ +H N+++++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL-RELKILKHFKHDNIIAIKD 121
Query: 328 CC-VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHY 386
T K ++V D M SD I H + LT + + + +G+ Y+H
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLME----SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS 177
Query: 387 GLKPGIYHRDIKSTNILLDSELNAKVADFGLAK---QSLEGHSHLTTRVAGTFGYLAPEY 443
+ HRD+K +N+L++ K+ DFG+A+ S H + T T Y APE
Sbjct: 178 A---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
Query: 444 AL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
L + T+ D++S G + E+++ R++ QL
Sbjct: 235 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL 273
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 25/227 (11%)
Query: 249 SGAKWFHVSELEQATNGFSQNNLIGQGA-SGIVYKGTLRHGNLVAVKQILDLDTKGDE-D 306
G +W + E + + +++G GA S ++ R LVA+K I +G E
Sbjct: 6 EGPRW---KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS 62
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDD--SSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
NE+ ++ KI+H N+++L DD SG +L+ + G L D I ++
Sbjct: 63 MENEIAVLHKIKHPNIVAL-------DDIYESGGHLYLIMQLVSGGELFDRIV---EKGF 112
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNIL---LDSELNAKVADFGLAKQS 421
T ++I V + YLH GI HRD+K N+L LD + ++DFGL+K
Sbjct: 113 YTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-- 167
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+E + + GT GY+APE ++ D +S G++ L+ G
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 35/219 (15%)
Query: 272 IGQGASGIVYKGTLRH------GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
+G+GA G V+ + LVAVK + + +DF E E+++ ++H++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ-------------LTWPQRKK 372
G C + G+ +V++YM +G L+ + SH L Q
Sbjct: 109 FGVC-----TEGRPLLMVFEYMRHGDLNRFLR-SHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 373 IIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRV 432
+ VA G+ YL GL HRD+ + N L+ L K+ DFG+++ +S RV
Sbjct: 163 VASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDI---YSTDYYRV 216
Query: 433 AGT----FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
G ++ PE LY + T +SDV+SFG+V+ E+ +
Sbjct: 217 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 269 NNLIGQGASGIVYKGTLR----HGNLVAVKQILDLDT-KGDEDFTNEVEIISKIRHRNLL 323
+IG G G V +G L+ + VA+K + T + +F +E I+ + H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
L G S ++ ++M NG L + ++ Q T Q ++ +A G+ Y
Sbjct: 79 RLEGVVTNSMPV-----MILTEFMENGALDSFLRLNDG--QFTVIQLVGMLRGIASGMRY 131
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG-----Y 438
L + HRD+ + NIL++S L KV+DFGL++ LE +S T + G +
Sbjct: 132 LA---EMSYVHRDLAARNILVNSNLVCKVSDFGLSR-FLEENSSDPTYTSSLGGKIPIRW 187
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMS 467
APE + + T SD +S+GIV+ E+MS
Sbjct: 188 TAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 17/219 (7%)
Query: 272 IGQGASGIVYKGTLR-HGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSLRG 327
IG GA G+V R G VA+K+I D+ T E++I+ +H N+++++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL-RELKILKHFKHDNIIAIKD 120
Query: 328 CC-VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHY 386
T K ++V D M SD I H + LT + + + +G+ Y+H
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLME----SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS 176
Query: 387 GLKPGIYHRDIKSTNILLDSELNAKVADFGLAK---QSLEGHSHLTTRVAGTFGYLAPEY 443
+ HRD+K +N+L++ K+ DFG+A+ S H + T T Y APE
Sbjct: 177 A---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
Query: 444 AL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
L + T+ D++S G + E+++ R++ QL
Sbjct: 234 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL 272
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 16/234 (6%)
Query: 255 HVSELEQATNGFSQNNLIGQGASGIVYKG-TLRHGNLVAVKQILDLDTKGDEDF----TN 309
H++ ++ + ++G G V+ LR VAVK +L D D F
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVK-VLRADLARDPSFYLRFRR 61
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E + + + H ++++ ++ +G ++V +Y+ TL D I H +T +
Sbjct: 62 EAQNAAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRD---IVHTEGPMTPKR 117
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
++I D + + + H GI HRD+K NI++ + KV DFG+A+ + + +T
Sbjct: 118 AIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 430 TRVA--GTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
A GT YL+PE A + +SDVYS G V+ E+++G T SP +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPVSV 227
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G VY+G + +L + L DT E+F E ++ +I+H NL+ L G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+++ ++M G L D + + R++++ + ++ + YL K
Sbjct: 288 EPPF-----YIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLE---KKN 338
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HR++ + N L+ KVADFGL++ + G ++ T F + APE Y +
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPESLAYNKF 396
Query: 450 TEKSDVYSFGIVILELMS 467
+ KSDV++FG+++ E+ +
Sbjct: 397 SIKSDVWAFGVLLWEIAT 414
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 16/234 (6%)
Query: 255 HVSELEQATNGFSQNNLIGQGASGIVYKGT-LRHGNLVAVKQILDLDTKGDEDF----TN 309
H++ ++ + ++G G V+ LR VAVK +L D D F
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVK-VLRADLARDPSFYLRFRR 61
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E + + + H ++++ ++ +G ++V +Y+ TL D I H +T +
Sbjct: 62 EAQNAAALNHPAIVAVYATG-EAETPAGPLPYIVMEYVDGVTLRD---IVHTEGPMTPKR 117
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
++I D + + + H + GI HRD+K NI++ + KV DFG+A+ + + +T
Sbjct: 118 AIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 430 TRVA--GTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
A GT YL+PE A + +SDVYS G V+ E+++G T SP +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPVSV 227
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 255 HVSELEQATNGFSQNNLIGQGASGIVYKG-TLRHGNLVAVKQILDLDTKGDEDF----TN 309
H++ ++ + ++G G V+ LR VAVK +L D D F
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVK-VLRADLARDPSFYLRFRR 61
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E + + + H ++++ ++ +G ++V +Y+ TL D I H +T +
Sbjct: 62 EAQNAAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRD---IVHTEGPMTPKR 117
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
++I D + + + H GI HRD+K NI++ + KV DFG+A+ + + +T
Sbjct: 118 AIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 430 TRVA--GTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
A GT YL+PE A + +SDVYS G V+ E+++G
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 78 PHVCRLLGICLTSTVQ------LIMQLMPFGXLLDYVR-EHKDNIGSQYLLNW------C 124
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 125 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 179
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 270 NLIGQGASGIVYKGTLRH---GNLVAVK-----QILDLDTKGDEDFTNEVEIISKIRHRN 321
+ +G G G V G +H G+ VAVK +I LD G E++ + RH +
Sbjct: 22 DTLGVGTFGKVKVG--KHELTGHKVAVKILNRQKIRSLDVVGK--IRREIQNLKLFRHPH 77
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
++ L T D F+V +Y+ G L D I K +L + +++ + G+
Sbjct: 78 IIKLYQVISTPSDI-----FMVMEYVSGGELFDYIC---KNGRLDEKESRRLFQQILSGV 129
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
Y H + + HRD+K N+LLD+ +NAK+ADFGL+ +G G+ Y AP
Sbjct: 130 DYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRXSCGSPNYAAP 184
Query: 442 EYALYGQLT--EKSDVYSFGIVILELMSGRKVLDTSTSP--FQLITD 484
E + G+L + D++S G+++ L+ G D P F+ I D
Sbjct: 185 E-VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICD 230
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 29/247 (11%)
Query: 233 LHEQFVSNLQASVLPNSGA----KWFHVSELEQATNGFSQNNLIGQGASGIVY----KGT 284
L+ Q +S++ AS P + + W S + ++ F + +G+GA+ IVY KGT
Sbjct: 18 LYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGT 77
Query: 285 LRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVY 344
+ L +K+ +D + E+ ++ ++ H N++ L+ T + S LV
Sbjct: 78 QKPYALKVLKKTVD-----KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEIS-----LVL 127
Query: 345 DYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILL 404
+ + G L D I ++ + + + + +AYLH + GI HRD+K N+L
Sbjct: 128 ELVTGGELFDRIV---EKGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLY 181
Query: 405 DS---ELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIV 461
+ + K+ADFGL+K + H L V GT GY APE + D++S GI+
Sbjct: 182 ATPAPDAPLKIADFGLSK--IVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGII 239
Query: 462 ILELMSG 468
L+ G
Sbjct: 240 TYILLCG 246
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 14/153 (9%)
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
L L C T D R + V +Y+ G L +I K K+ PQ +++ G+
Sbjct: 82 LTQLHSCFQTVD-----RLYFVMEYVNGGDLMYHIQQVGKFKE---PQAVFYAAEISIGL 133
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR-VAGTFGYLA 440
+LH K GI +RD+K N++LDSE + K+ADFG+ K+ + +TTR GT Y+A
Sbjct: 134 FFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM--MDGVTTREFCGTPDYIA 188
Query: 441 PEYALYGQLTEKSDVYSFGIVILELMSGRKVLD 473
PE Y + D +++G+++ E+++G+ D
Sbjct: 189 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 81 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 127
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 128 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 182
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 125
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 180
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 80 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 126
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 181
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 77 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 123
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 178
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 78 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 124
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 125 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 179
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G VY+G + +L + L DT E+F E ++ +I+H NL+ L G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+++ ++M G L D + + R+++ + ++ + YL K
Sbjct: 327 EPPF-----YIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLE---KKN 377
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HR++ + N L+ KVADFGL++ + G ++ T F + APE Y +
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPESLAYNKF 435
Query: 450 TEKSDVYSFGIVILELMS 467
+ KSDV++FG+++ E+ +
Sbjct: 436 SIKSDVWAFGVLLWEIAT 453
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 16/234 (6%)
Query: 255 HVSELEQATNGFSQNNLIGQGASGIVYKG-TLRHGNLVAVKQILDLDTKGDEDF----TN 309
H++ ++ + ++G G V+ LR VAVK +L D D F
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVK-VLRADLARDPSFYLRFRR 61
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E + + + H ++++ ++ +G ++V +Y+ TL D I H +T +
Sbjct: 62 EAQNAAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRD---IVHTEGPMTPKR 117
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
++I D + + + H GI HRD+K NI++ + KV DFG+A+ + + +T
Sbjct: 118 AIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 430 TRVA--GTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
A GT YL+PE A + +SDVYS G V+ E+++G T SP +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPVSV 227
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLVAVKQILDLDTKGDE---DFTNEVEIISKIRHRN 321
FS IG G+ G VY +R+ +VA+K++ + +E D EV + K+RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
+ RGC + + +LV +Y G+ SD + + HK K L + + +G+
Sbjct: 116 TIQYRGCYLREHTA-----WLVMEYC-LGSASDLLEV-HK-KPLQEVEIAAVTHGALQGL 167
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
AYLH + HRD+K+ NILL K+ DFG A + + GT ++AP
Sbjct: 168 AYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAP 219
Query: 442 EYAL---YGQLTEKSDVYSFGIVILEL 465
E L GQ K DV+S GI +EL
Sbjct: 220 EVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G G G VY+G + +L + L DT E+F E ++ +I+H NL+ L G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPG 391
+++ ++M G L D + + R+++ + ++ + YL K
Sbjct: 285 EPPF-----YIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLE---KKN 335
Query: 392 IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQL 449
HR++ + N L+ KVADFGL++ + G ++ T F + APE Y +
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTY-TAHAGAKFPIKWTAPESLAYNKF 393
Query: 450 TEKSDVYSFGIVILELMS 467
+ KSDV++FG+++ E+ +
Sbjct: 394 SIKSDVWAFGVLLWEIAT 411
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 32/216 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 123
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 178
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E L+ T +SDV+S+G+ + ELM+
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGXLLDYVR-EHKDNIGSQYLLNW------C 123
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 178
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 32/224 (14%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLRHGNL---VAVKQILDLDTKGDE-DFTNEVEIISKIRH 319
N ++IG+G G V K ++ L A+K++ + +K D DF E+E++ K+ H
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 320 R-NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISH-------------KRKQL 365
N+++L G C +L +Y P+G L D + S L
Sbjct: 82 HPNIINLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 366 TWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH 425
+ Q DVA+G+ YL + HR++ + NIL+ AK+ADFGL++ G
Sbjct: 137 SSQQLLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR----GQ 189
Query: 426 SHLTTRVAGTF--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ G ++A E Y T SDV+S+G+++ E++S
Sbjct: 190 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 87 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 133
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 134 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 188
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 189 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 14/234 (5%)
Query: 243 ASVLPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGT-LRHGNLVAVKQILDLDT 301
AS P +S L F L+G G G VYKG ++ G L A+K ++D+
Sbjct: 3 ASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIK-VMDVTG 61
Query: 302 KGDEDFTNEVEIISKI-RHRNLLSLRGCCVTSDDSS-GKRRFLVYDYMPNGTLSDNISIS 359
+E+ E+ ++ K HRN+ + G + + + +LV ++ G+++D I +
Sbjct: 62 DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIK-N 120
Query: 360 HKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK 419
K L I ++ +G+++LH + + HRDIK N+LL K+ DFG++
Sbjct: 121 TKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 177
Query: 420 QSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE-----KSDVYSFGIVILELMSG 468
Q L+ GT ++APE + + KSD++S GI +E+ G
Sbjct: 178 Q-LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 71 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 117
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 118 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 172
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 173 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 272 IGQGASGIVYKGT-LRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCV 330
IGQGASG VY + G VA++Q+ E NE+ ++ + ++ N+++ +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
D+ ++V +Y+ G+L+D ++ + Q + + + + +LH
Sbjct: 89 VGDE-----LWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN--- 136
Query: 391 GIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLT 450
+ HR+IKS NILL + + K+ DFG Q S +T V GT ++APE
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYG 195
Query: 451 EKSDVYSFGIVILELMSGR 469
K D++S GI+ +E++ G
Sbjct: 196 PKVDIWSLGIMAIEMIEGE 214
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 272 IGQGASGIVYKGT-LRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCV 330
IGQGASG VY + G VA++Q+ E NE+ ++ + ++ N+++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
D+ ++V +Y+ G+L+D ++ + Q + + + + +LH
Sbjct: 88 VGDE-----LWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN--- 135
Query: 391 GIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLT 450
+ HRDIKS NILL + + K+ DFG Q S + V GT ++APE
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYG 194
Query: 451 EKSDVYSFGIVILELMSGR 469
K D++S GI+ +E++ G
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGN-LVAVKQILDLDTKGDEDF---TNEVEIISKIRHRN 321
F + ++G+G+ G V+ + N A+K + D+D E ++S
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
L+ C + ++ F V +Y+ G L +I HK + ++ G+
Sbjct: 80 FLTHMFCTFQTKENL----FFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGL 132
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
+LH GI +RD+K NILLD + + K+ADFG+ K+++ G + T GT Y+AP
Sbjct: 133 QFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTPDYIAP 188
Query: 442 EYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ 480
E L + D +SFG+++ E++ G+ SPF
Sbjct: 189 EILLGQKYNHSVDWWSFGVLLYEMLIGQ-------SPFH 220
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 123
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 178
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLVAVKQILDLDTKGDE---DFTNEVEIISKIRHRN 321
FS IG G+ G VY +R+ +VA+K++ + +E D EV + K+RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
+ RGC + + +LV +Y G+ SD + + +K L + + +G+
Sbjct: 77 TIQYRGCYLREHTA-----WLVMEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGL 128
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
AYLH + HRD+K+ NILL K+ DFG A + GT ++AP
Sbjct: 129 AYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-----FVGTPYWMAP 180
Query: 442 EYAL---YGQLTEKSDVYSFGIVILEL 465
E L GQ K DV+S GI +EL
Sbjct: 181 EVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 112/237 (47%), Gaps = 16/237 (6%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKG-TLRHGNLVAVKQILDLDTKGDEDF--- 307
+ H++ ++ + ++G G V+ LR VAVK +L D D F
Sbjct: 17 RGSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVK-VLRADLARDPSFYLR 75
Query: 308 -TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLT 366
E + + + H ++++ ++ +G ++V +Y+ TL D I H +T
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRD---IVHTEGPMT 131
Query: 367 WPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHS 426
+ ++I D + + + H + GI HRD+K NI++ + KV DFG+A+ + +
Sbjct: 132 PKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 188
Query: 427 HLTTRVA--GTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
+T A GT YL+PE A + +SDVYS G V+ E+++G T SP +
Sbjct: 189 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPVSV 244
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 79 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 125
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 180
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 43/261 (16%)
Query: 266 FSQNNLIGQGASGIVYKGTLR-HGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
F + LIG G G V+K R G ++++ +E EV+ ++K+ H N++
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRV----KYNNEKAEREVKALAKLDHVNIVH 69
Query: 325 LRGCC-------VTSDDS-------------SGKRR----FLVYDYMPNGTLSDNISISH 360
GC TSDDS S + + F+ ++ GTL I
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE-KR 128
Query: 361 KRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ 420
+ ++L ++ + KG+ Y+H + HRD+K +NI L K+ DFGL
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLV-T 184
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ 480
SL+ TR GT Y++PE ++ D+Y+ G+++ EL+ V DT+ +
Sbjct: 185 SLKNDGK-RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTAFETSK 240
Query: 481 LITDWAWVLAKSGKVDDIFDE 501
TD + G + DIFD+
Sbjct: 241 FFTD-----LRDGIISDIFDK 256
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 27/234 (11%)
Query: 255 HVSELEQATN--GFSQNNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGDEDFT 308
HV E + + F ++GQG+ G V+ G+ L A+K + K +
Sbjct: 13 HVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR 72
Query: 309 NEVE--IISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLT 366
++E I+ ++ H ++ L T + +L+ D++ G L +S K T
Sbjct: 73 TKMERDILVEVNHPFIVKLHYAFQTEG-----KLYLILDFLRGGDLFTRLS---KEVMFT 124
Query: 367 WPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHS 426
K + ++A + +LH GI +RD+K NILLD E + K+ DFGL+K+S++ H
Sbjct: 125 EEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID-HE 180
Query: 427 HLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ 480
GT Y+APE T+ +D +SFG+++ E+++G T PFQ
Sbjct: 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG-------TLPFQ 227
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 126
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 181
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 126
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 181
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 272 IGQGASGIVYKGT-LRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCV 330
IGQGASG VY + G VA++Q+ E NE+ ++ + ++ N+++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
D+ ++V +Y+ G+L+D ++ + Q + + + + +LH
Sbjct: 88 VGDE-----LWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN--- 135
Query: 391 GIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLT 450
+ HRDIKS NILL + + K+ DFG Q S + V GT ++APE
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYG 194
Query: 451 EKSDVYSFGIVILELMSGR 469
K D++S GI+ +E++ G
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 126
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 181
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 83 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 129
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 130 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 184
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 185 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 130
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 185
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 270 NLIGQGASGIVYKGT-LRHGNLVAVKQILDL--DTKGDEDF---TNEVEIISKIRHRNLL 323
++G G G V+KG + G + + + + D G + F T+ + I + H +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKIIVDVA 378
L G C G LV Y+P G+L D++ H+ + L W V +A
Sbjct: 79 RLLGLC------PGSSLQLVTQYLPLGSLLDHVR-QHRGALGPQLLLNWG------VQIA 125
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT-FG 437
KG+ YL + G+ HR++ + N+LL S +VADFG+A L A T
Sbjct: 126 KGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 182
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E +G+ T +SDV+S+G+ + ELM+
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 272 IGQGASGIVYKGT-LRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCV 330
IGQGASG VY + G VA++Q+ E NE+ ++ + ++ N+++ +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
D+ ++V +Y+ G+L+D ++ + Q + + + + +LH
Sbjct: 89 VGDE-----LWVVMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN--- 136
Query: 391 GIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLT 450
+ HRDIKS NILL + + K+ DFG Q S + V GT ++APE
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYG 195
Query: 451 EKSDVYSFGIVILELMSGR 469
K D++S GI+ +E++ G
Sbjct: 196 PKVDIWSLGIMAIEMIEGE 214
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 40/232 (17%)
Query: 261 QATNGFSQN----NLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD----------ED 306
+T+GF +N ++G+G S +V + + +I+D+ G E
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 307 FTNEVEIISKIR-HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQL 365
EV+I+ K+ H N++ L+ T+ FLV+D M G L D ++ ++ L
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETN-----TFFFLVFDLMKKGELFDYLT---EKVTL 121
Query: 366 TWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH 425
+ + +KI+ + + I LH K I HRD+K NILLD ++N K+ DFG + Q G
Sbjct: 122 SEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 178
Query: 426 SHLTTRVAGTFGYLAPE---------YALYGQLTEKSDVYSFGIVILELMSG 468
V GT YLAPE + YG+ + D++S G+++ L++G
Sbjct: 179 K--LREVCGTPSYLAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAG 225
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI--RHRNLLSLRGCC 329
IG+G G V++G R G VAVK ++ + + E EI + RH N+L
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKI---FSSREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL- 388
D+ + + +LV DY +G+L D ++ R +T K+ + A G+A+LH +
Sbjct: 68 -NKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 122
Query: 389 ----KPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRV-------AGTFG 437
KP I HRD+KS NIL+ +AD GLA + H T + GT
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR----HDSATDTIDIAPNHRVGTKR 178
Query: 438 YLAPEY------ALYGQLTEKSDVYSFGIVILEL 465
Y+APE + + +++D+Y+ G+V E+
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 270 NLIGQGASGIVYKGT-LRHGNLVAVKQILDL--DTKGDEDF---TNEVEIISKIRHRNLL 323
++G G G V+KG + G + + + + D G + F T+ + I + H +++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKIIVDVA 378
L G C G LV Y+P G+L D++ H+ + L W V +A
Sbjct: 97 RLLGLC------PGSSLQLVTQYLPLGSLLDHVR-QHRGALGPQLLLNWG------VQIA 143
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT-FG 437
KG+ YL + G+ HR++ + N+LL S +VADFG+A L A T
Sbjct: 144 KGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 200
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++A E +G+ T +SDV+S+G+ + ELM+
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 27/234 (11%)
Query: 255 HVSELEQATN--GFSQNNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGDEDFT 308
HV E + + F ++GQG+ G V+ G+ L A+K + K +
Sbjct: 14 HVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR 73
Query: 309 NEVE--IISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLT 366
++E I+ ++ H ++ L T + +L+ D++ G L +S K T
Sbjct: 74 TKMERDILVEVNHPFIVKLHYAFQTEG-----KLYLILDFLRGGDLFTRLS---KEVMFT 125
Query: 367 WPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHS 426
K + ++A + +LH GI +RD+K NILLD E + K+ DFGL+K+S++ H
Sbjct: 126 EEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID-HE 181
Query: 427 HLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ 480
GT Y+APE T+ +D +SFG+++ E+++G T PFQ
Sbjct: 182 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG-------TLPFQ 228
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 27/234 (11%)
Query: 255 HVSELEQATN--GFSQNNLIGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGDEDFT 308
HV E + + F ++GQG+ G V+ G+ L A+K + K +
Sbjct: 13 HVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR 72
Query: 309 NEVE--IISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLT 366
++E I+ ++ H ++ L T + +L+ D++ G L +S K T
Sbjct: 73 TKMERDILVEVNHPFIVKLHYAFQTEG-----KLYLILDFLRGGDLFTRLS---KEVMFT 124
Query: 367 WPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHS 426
K + ++A + +LH GI +RD+K NILLD E + K+ DFGL+K+S++ H
Sbjct: 125 EEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID-HE 180
Query: 427 HLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ 480
GT Y+APE T+ +D +SFG+++ E+++G T PFQ
Sbjct: 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG-------TLPFQ 227
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 102 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 148
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 149 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 203
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 204 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 270 NLIGQGASGIVYKGTLR-HGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGC 328
++G GA V+ R G L A+K I D NE+ ++ KI+H N+++L
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
S +LV + G L D I +R T +I V + YLH
Sbjct: 75 Y-----ESTTHYYLVMQLVSGGELFDRIL---ERGVYTEKDASLVIQQVLSAVKYLH--- 123
Query: 389 KPGIYHRDIKSTNIL-LDSELNAK--VADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
+ GI HRD+K N+L L E N+K + DFGL+K G + + GT GY+APE
Sbjct: 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYVAPEVLA 180
Query: 446 YGQLTEKSDVYSFGIVILELMSG 468
++ D +S G++ L+ G
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCG 203
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI--RHRNLLSLRGCC 329
IG+G G V++G R G VAVK ++ + + E EI + RH N+L
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKI---FSSREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL- 388
D+ + + +LV DY +G+L D ++ R +T K+ + A G+A+LH +
Sbjct: 70 -NKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 124
Query: 389 ----KPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRV-------AGTFG 437
KP I HRD+KS NIL+ +AD GLA + H T + GT
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR----HDSATDTIDIAPNHRVGTKR 180
Query: 438 YLAPEY------ALYGQLTEKSDVYSFGIVILEL 465
Y+APE + + +++D+Y+ G+V E+
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLVAVK-QILDL----DTKGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V + I++L K +++ +E +++ + +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 111 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 157
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 158 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 212
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 213 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI--RHRNLLSLRGCC 329
IG+G G V++G R G VAVK ++ + + E EI + RH N+L
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKI---FSSREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL- 388
D+ + + +LV DY +G+L D ++ R +T K+ + A G+A+LH +
Sbjct: 73 -NKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 127
Query: 389 ----KPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRV-------AGTFG 437
KP I HRD+KS NIL+ +AD GLA + H T + GT
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR----HDSATDTIDIAPNHRVGTKR 183
Query: 438 YLAPEY------ALYGQLTEKSDVYSFGIVILEL 465
Y+APE + + +++D+Y+ G+V E+
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI--RHRNLLSLRGCC 329
IG+G G V++G R G VAVK ++ + + E EI + RH N+L
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKI---FSSREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL- 388
D+ + + +LV DY +G+L D ++ R +T K+ + A G+A+LH +
Sbjct: 67 -NKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 121
Query: 389 ----KPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRV-------AGTFG 437
KP I HRD+KS NIL+ +AD GLA + H T + GT
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR----HDSATDTIDIAPNHRVGTKR 177
Query: 438 YLAPEY------ALYGQLTEKSDVYSFGIVILEL 465
Y+APE + + +++D+Y+ G+V E+
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 11/163 (6%)
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLT 366
F EV S++ H+N++S+ D +LV +Y+ TLS+ I SH L+
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDV-----DEEDDCYYLVMEYIEGPTLSEYIE-SHG--PLS 109
Query: 367 WPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHS 426
+ GI + H I HRDIK NIL+DS K+ DFG+AK E
Sbjct: 110 VDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166
Query: 427 HLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
T V GT Y +PE A E +D+YS GIV+ E++ G
Sbjct: 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 40/232 (17%)
Query: 261 QATNGFSQN----NLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD----------ED 306
+T+GF +N ++G+G S +V + + +I+D+ G E
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 307 FTNEVEIISKIR-HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQL 365
EV+I+ K+ H N++ L+ T+ FLV+D M G L D ++ ++ L
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETN-----TFFFLVFDLMKKGELFDYLT---EKVTL 121
Query: 366 TWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH 425
+ + +KI+ + + I LH K I HRD+K NILLD ++N K+ DFG + Q G
Sbjct: 122 SEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 178
Query: 426 SHLTTRVAGTFGYLAPE---------YALYGQLTEKSDVYSFGIVILELMSG 468
V GT YLAPE + YG+ + D++S G+++ L++G
Sbjct: 179 K--LRSVCGTPSYLAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAG 225
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI--RHRNLLSLRGCC 329
IG+G G V++G R G VAVK ++ + + E EI + RH N+L
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKI---FSSREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL- 388
D+ + + +LV DY +G+L D ++ R +T K+ + A G+A+LH +
Sbjct: 93 -NKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 147
Query: 389 ----KPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRV-------AGTFG 437
KP I HRD+KS NIL+ +AD GLA + H T + GT
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR----HDSATDTIDIAPNHRVGTKR 203
Query: 438 YLAPEY------ALYGQLTEKSDVYSFGIVILEL 465
Y+APE + + +++D+Y+ G+V E+
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 17/206 (8%)
Query: 269 NNLIGQGASGIVYKGTLR----HGNLVAVKQI-LDLDTKGDEDFTNEVEIISKIRHRNLL 323
+IG G G V G L+ VA+K + K DF +E I+ + H N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
L G + K ++ +YM NG+L + + R T Q ++ + G+ Y
Sbjct: 94 HLEGVV-----TKCKPVMIITEYMENGSLDAFLRKNDGR--FTVIQLVGMLRGIGSGMKY 146
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT--FGYLAP 441
L HRD+ + NIL++S L KV+DFG+++ + T G + AP
Sbjct: 147 LS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 203
Query: 442 EYALYGQLTEKSDVYSFGIVILELMS 467
E Y + T SDV+S+GIV+ E+MS
Sbjct: 204 EAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI--RHRNLLSLRGCC 329
IG+G G V++G R G VAVK ++ + + E EI + RH N+L
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKI---FSSREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL- 388
D+ + + +LV DY +G+L D ++ R +T K+ + A G+A+LH +
Sbjct: 106 -NKDNGTWTQLWLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 160
Query: 389 ----KPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRV-------AGTFG 437
KP I HRD+KS NIL+ +AD GLA + H T + GT
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR----HDSATDTIDIAPNHRVGTKR 216
Query: 438 YLAPEY------ALYGQLTEKSDVYSFGIVILEL 465
Y+APE + + +++D+Y+ G+V E+
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 270 NLIGQGASGIVYKGTLR----HGNLVAVKQILDLDT-KGDEDFTNEVEIISKIRHRNLLS 324
+IG G G V G L+ VA+K + T K DF +E I+ + H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
L G S ++ ++M NG+L + Q T Q ++ +A G+ YL
Sbjct: 73 LEGVVTKSTPV-----MIITEFMENGSLDS--FLRQNDGQFTVIQLVGMLRGIAAGMKYL 125
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG-----YL 439
HR + + NIL++S L KV+DFGL++ LE + T + G +
Sbjct: 126 ---ADMNYVHRALAARNILVNSNLVCKVSDFGLSR-FLEDDTSDPTYTSALGGKIPIRWT 181
Query: 440 APEYALYGQLTEKSDVYSFGIVILELMS 467
APE Y + T SDV+S+GIV+ E+MS
Sbjct: 182 APEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 56/243 (23%)
Query: 266 FSQNNL-----IGQGASGIVYK----GTLRHG--NLVAVKQILDLDTKGD--EDFTNEVE 312
+ +NN+ IG+GA G V++ G L + +VAVK +L + D DF E
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVK-MLKEEASADMQADFQREAA 102
Query: 313 IISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNI---------SISHK-- 361
++++ + N++ L G C GK L+++YM G L++ + S+SH
Sbjct: 103 LMAEFDNPNIVKLLGVCAV-----GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 157
Query: 362 --RKQLTWP--------QRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAK 411
R +++ P ++ I VA G+AYL + HRD+ + N L+ + K
Sbjct: 158 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVK 214
Query: 412 VADFGLAKQ-------SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE 464
+ADFGL++ +G+ + R ++ PE Y + T +SDV+++G+V+ E
Sbjct: 215 IADFGLSRNIYSADYYKADGNDAIPIR------WMPPESIFYNRYTTESDVWAYGVVLWE 268
Query: 465 LMS 467
+ S
Sbjct: 269 IFS 271
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 269 NNLIGQGASGIVYKGTLR----HGNLVAVKQI-LDLDTKGDEDFTNEVEIISKIRHRNLL 323
+IG G G V G L+ VA+K + K DF +E I+ + H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
L G K ++ +YM NG+L + + R T Q ++ + G+ Y
Sbjct: 73 HLEGVVTKC-----KPVMIITEYMENGSLDAFLRKNDGR--FTVIQLVGMLRGIGSGMKY 125
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT--FGYLAP 441
L HRD+ + NIL++S L KV+DFG+++ + T G + AP
Sbjct: 126 LS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 442 EYALYGQLTEKSDVYSFGIVILELMS 467
E Y + T SDV+S+GIV+ E+MS
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 120/248 (48%), Gaps = 26/248 (10%)
Query: 226 KKRKQIALHEQFVSNLQASVLPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTL 285
KK +++ L EQ L+A + V EL+ + F + + +G G G+V+K +
Sbjct: 2 KKLEELELDEQQRKRLEAFLTQKQ-----KVGELKD--DDFEKISELGAGNGGVVFKVSH 54
Query: 286 RHGNLVAVKQILDLDTKG--DEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLV 343
+ LV ++++ L+ K E++++ + ++ G + + S +
Sbjct: 55 KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-----IC 109
Query: 344 YDYMPNGTLSDNISISHKRKQLTWPQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTN 401
++M G+L + +K P++ K+ + V KG+ YL K I HRD+K +N
Sbjct: 110 MEHMDGGSLDQVL-----KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSN 162
Query: 402 ILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIV 461
IL++S K+ DFG++ Q ++ + GT Y++PE + +SD++S G+
Sbjct: 163 ILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 219
Query: 462 ILELMSGR 469
++E+ GR
Sbjct: 220 LVEMAVGR 227
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGN-LVAVKQILDLDTKGDEDF---TNEVEIISKIRHRN 321
F + ++G+G+ G V+ + N A+K + D+D E ++S
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
L+ C + ++ F V +Y+ G L +I HK + ++ G+
Sbjct: 79 FLTHMFCTFQTKENL----FFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGL 131
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
+LH GI +RD+K NILLD + + K+ADFG+ K+++ G + T GT Y+AP
Sbjct: 132 QFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGTPDYIAP 187
Query: 442 EYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ 480
E L + D +SFG+++ E++ G+ SPF
Sbjct: 188 EILLGQKYNHSVDWWSFGVLLYEMLIGQ-------SPFH 219
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 112/232 (48%), Gaps = 38/232 (16%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI--RHRNLLSLRGCC 329
+G+G G V++G+ + G VAVK D K + E E+ + + RH N+L
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKS---WFRETELYNTVMLRHENILGFIASD 71
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL- 388
+TS SS + +L+ Y G+L D + ++ L +I++ +A G+A+LH +
Sbjct: 72 MTSRHSSTQL-WLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 389 ----KPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTT----RVAGTFGYLA 440
KP I HRD+KS NIL+ +AD GLA + + L RV GT Y+A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMA 185
Query: 441 PE----------YALYGQLTEKSDVYSFGIVILEL---MSGRKVLDTSTSPF 479
PE + Y ++ D+++FG+V+ E+ M +++ PF
Sbjct: 186 PEVLDETIQVDCFDSY----KRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 22/228 (9%)
Query: 261 QATNGFSQNNLIGQGASGIVYKGTLRH-GNLVAVKQIL--DLDTKGDEDFTNEVEIISKI 317
Q+ + L+G+G+ G+V K + G +VA+K+ L D D + E++++ ++
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
RH NL++L C KR +LV++++ + L D + L + +K + +
Sbjct: 82 RHENLVNLLEVC-----KKKKRWYLVFEFVDHTILDD---LELFPNGLDYQVVQKYLFQI 133
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
GI + H I HRDIK NIL+ K+ DFG A+ +L + T
Sbjct: 134 INGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFAR-TLAAPGEVYDDEVATRW 189
Query: 438 YLAPEYAL----YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
Y APE + YG+ DV++ G ++ E+ G + + QL
Sbjct: 190 YRAPELLVGDVKYGKAV---DVWAIGCLVTEMFMGEPLFPGDSDIDQL 234
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 112/232 (48%), Gaps = 38/232 (16%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI--RHRNLLSLRGCC 329
+G+G G V++G+ + G VAVK D K + E E+ + + RH N+L
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKS---WFRETELYNTVMLRHENILGFIASD 71
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL- 388
+TS SS + +L+ Y G+L D + ++ L +I++ +A G+A+LH +
Sbjct: 72 MTSRHSSTQL-WLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 389 ----KPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTT----RVAGTFGYLA 440
KP I HRD+KS NIL+ +AD GLA + + L RV GT Y+A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMA 185
Query: 441 PE----------YALYGQLTEKSDVYSFGIVILEL---MSGRKVLDTSTSPF 479
PE + Y ++ D+++FG+V+ E+ M +++ PF
Sbjct: 186 PEVLDETIQVDCFDSY----KRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 269 NNLIGQGASGIVYKGTLR----HGNLVAVKQI-LDLDTKGDEDFTNEVEIISKIRHRNLL 323
+IG G G V G L+ VA+K + K DF +E I+ + H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
L G K ++ +YM NG+L + + R T Q ++ + G+ Y
Sbjct: 79 HLEGVVTKC-----KPVMIITEYMENGSLDAFLRKNDGR--FTVIQLVGMLRGIGSGMKY 131
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT--FGYLAP 441
L HRD+ + NIL++S L KV+DFG+++ + T G + AP
Sbjct: 132 LS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 188
Query: 442 EYALYGQLTEKSDVYSFGIVILELMS 467
E Y + T SDV+S+GIV+ E+MS
Sbjct: 189 EAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
Query: 270 NLIGQGASGIVYKGTLRHGNLVAVK---QILDLDTKGD---EDFTNEVEIISKIRHRNLL 323
++G+G G V +G L+ + ++K + + LD E+F +E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR---KQLTWPQRKKIIVDVAKG 380
L G C+ + ++ +M G L + S K + K +VD+A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT-FGYL 439
+ YL HRD+ + N +L ++ VADFGL+K+ G + R+A ++
Sbjct: 160 MEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 440 APEYALYGQLTEKSDVYSFGIVILEL 465
A E T KSDV++FG+ + E+
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 74 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 120
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +A+G+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 121 VQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 175
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 176 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 30/248 (12%)
Query: 266 FSQNNLIGQGASGIVYKGTLR-HGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
F + LIG G G V+K R G +K++ +E EV+ ++K+ H N++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV----KYNNEKAEREVKALAKLDHVNIVH 68
Query: 325 LRGCC-------VTSDDSSGKRR----FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKI 373
GC TS +S + + F+ ++ GTL I + ++L ++
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE-KRRGEKLDKVLALEL 127
Query: 374 IVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVA 433
+ KG+ Y+H + +RD+K +NI L K+ DFGL SL+ R
Sbjct: 128 FEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGK-RXRSK 182
Query: 434 GTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSG 493
GT Y++PE ++ D+Y+ G+++ EL+ V DT+ + TD + G
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTAFETSKFFTD-----LRDG 234
Query: 494 KVDDIFDE 501
+ DIFD+
Sbjct: 235 IISDIFDK 242
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 19/209 (9%)
Query: 272 IGQGASGIVYKGTLRHGNL----VAVKQILDLDTKGDEDFT-NEVEIISKIRHRNLLSLR 326
IG+GA G+V + NL VA+K+I + + T E++I+ + RH N++ +
Sbjct: 35 IGEGAYGMVCSA---YDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIN 91
Query: 327 GCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHY 386
K ++V D M ++ K + L+ + + +G+ Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 387 GLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAPEYA 444
+ HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y APE
Sbjct: 147 A---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 445 LYGQLTEKS-DVYSFGIVILELMSGRKVL 472
L + KS D++S G ++ E++S R +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 25/221 (11%)
Query: 266 FSQNNLIGQGASGIVY--KGTLR--HGNLVAVKQILDLDTKGDEDFTNEVE--IISKIRH 319
F ++GQG+ G V+ + R G+L A+K + K + ++E I++ + H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
++ L T + +L+ D++ G L +S K T K + ++A
Sbjct: 90 PFVVKLHYAFQTEG-----KLYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELAL 141
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYL 439
G+ +LH GI +RD+K NILLD E + K+ DFGL+K++++ H GT Y+
Sbjct: 142 GLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAID-HEKKAYSFCGTVEYM 197
Query: 440 APEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ 480
APE + +D +S+G+++ E+++G + PFQ
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTG-------SLPFQ 231
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 112/232 (48%), Gaps = 38/232 (16%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI--RHRNLLSLRGCC 329
+G+G G V++G+ + G VAVK D K + E E+ + + RH N+L
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKS---WFRETELYNTVMLRHENILGFIASD 100
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL- 388
+TS SS + +L+ Y G+L D + ++ L +I++ +A G+A+LH +
Sbjct: 101 MTSRHSS-TQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 389 ----KPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTT----RVAGTFGYLA 440
KP I HRD+KS NIL+ +AD GLA + + L RV GT Y+A
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMA 214
Query: 441 PE----------YALYGQLTEKSDVYSFGIVILEL---MSGRKVLDTSTSPF 479
PE + Y ++ D+++FG+V+ E+ M +++ PF
Sbjct: 215 PEVLDETIQVDCFDSY----KRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 262
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKG--DEDFTNEVEIISKI 317
E + F + + +G G G+V K R L+ ++++ L+ K E++++ +
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
++ G + + S + ++M G+L + + K++ K+ + V
Sbjct: 72 NSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLD---QVLKEAKRIPEEILGKVSIAV 123
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
+G+AYL K I HRD+K +NIL++S K+ DFG++ Q ++ + GT
Sbjct: 124 LRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRS 178
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
Y+APE + +SD++S G+ ++EL GR
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 81 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 127
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFG AK L G G
Sbjct: 128 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAK--LLGAEEKEYHAEG 182
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 259 LEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKG--DEDFTNEVEIISK 316
+E + F + + +G G G+V+K + + LV ++++ L+ K E++++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQR--KKII 374
++ G + + S + ++M G+L + +K P++ K+
Sbjct: 61 CNSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVL-----KKAGRIPEQILGKVS 110
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
+ V KG+ YL K I HRD+K +NIL++S K+ DFG++ Q ++ + G
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVG 165
Query: 435 TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
T Y++PE + +SD++S G+ ++E+ GR
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 259 LEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKG--DEDFTNEVEIISK 316
+E + F + + +G G G+V+K + + LV ++++ L+ K E++++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQR--KKII 374
++ G + + S + ++M G+L + +K P++ K+
Sbjct: 61 CNSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVL-----KKAGRIPEQILGKVS 110
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
+ V KG+ YL K I HRD+K +NIL++S K+ DFG++ Q ++ + G
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVG 165
Query: 435 TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
T Y++PE + +SD++S G+ ++E+ GR
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 259 LEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKG--DEDFTNEVEIISK 316
+E + F + + +G G G+V+K + + LV ++++ L+ K E++++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQR--KKII 374
++ G + + S + ++M G+L + +K P++ K+
Sbjct: 61 CNSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVL-----KKAGRIPEQILGKVS 110
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
+ V KG+ YL K I HRD+K +NIL++S K+ DFG++ Q ++ + G
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVG 165
Query: 435 TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
T Y++PE + +SD++S G+ ++E+ GR
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 125
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFG AK L G G
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAK--LLGAEEKEYHAEG 180
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 125
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFG AK L G G
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAK--LLGAEEKEYHAEG 180
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 104/213 (48%), Gaps = 15/213 (7%)
Query: 259 LEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKG--DEDFTNEVEIISK 316
+E + F + + +G G G+V+K + + LV ++++ L+ K E++++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVD 376
++ G + + S + ++M G+L + K ++ K+ +
Sbjct: 61 CNSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLD---QVLKKAGRIPEQILGKVSIA 112
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF 436
V KG+ YL K I HRD+K +NIL++S K+ DFG++ Q ++ + GT
Sbjct: 113 VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTR 167
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
Y++PE + +SD++S G+ ++E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 104/213 (48%), Gaps = 15/213 (7%)
Query: 259 LEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKG--DEDFTNEVEIISK 316
+E + F + + +G G G+V+K + + LV ++++ L+ K E++++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVD 376
++ G + + S + ++M G+L + K ++ K+ +
Sbjct: 61 CNSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLD---QVLKKAGRIPEQILGKVSIA 112
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF 436
V KG+ YL K I HRD+K +NIL++S K+ DFG++ Q ++ + GT
Sbjct: 113 VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTR 167
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
Y++PE + +SD++S G+ ++E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++ GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 84 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 130
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 185
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 123
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFG AK L G G
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAK--LLGAEEKEYHAEG 178
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++ GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 123
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 178
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKG--DEDFTNEVEIISKI 317
E + F + + +G G G+V+K + + LV ++++ L+ K E++++ +
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQR--KKIIV 375
++ G + + S + ++M G+L + +K P++ K+ +
Sbjct: 65 NSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSI 114
Query: 376 DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT 435
V KG+ YL K I HRD+K +NIL++S K+ DFG++ Q ++ + GT
Sbjct: 115 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---EMANEFVGT 169
Query: 436 FGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
Y++PE + +SD++S G+ ++E+ GR
Sbjct: 170 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 79 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 125
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFG AK L G G
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAK--LLGAEEKEYHAEG 180
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++G GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 130
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFG AK L G G
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAK--LLGAEEKEYHAEG 185
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 33/223 (14%)
Query: 266 FSQNNLIGQGASGIVYKGT-LRHGNLV----AVKQILDLDT-KGDEDFTNEVEIISKIRH 319
F + ++ GA G VYKG + G V A+K++ + + K +++ +E +++ + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-----RKQLTWPQRKKII 374
++ L G C+TS L+ MP G L D + HK + L W
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR-EHKDNIGSQYLLNW------C 130
Query: 375 VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG 434
V +AKG+ YL + HRD+ + N+L+ + + K+ DFGLAK L G G
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK--LLGAEEKEYHAEG 185
Query: 435 ---TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS-GRKVLD 473
++A E L+ T +SDV+S+G+ + ELM+ G K D
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL----VAVKQILDLDTKGDEDFT-NEVEIISKIRHR 320
++ + IG+GA G+V + NL VA+K+I + + T E++I+ + RH
Sbjct: 23 YTNLSYIGEGAYGMVCSA---YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 79
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ + K ++V D M ++ K + L+ + + +G
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRG 134
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGY 438
+ Y+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y
Sbjct: 135 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 439 LAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
APE L + KS D++S G ++ E++S R +
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL----VAVKQILDLDTKGDEDFT-NEVEIISKIRHR 320
++ + IG+GA G+V + NL VA+K+I + + T E++I+ + RH
Sbjct: 30 YTNLSYIGEGAYGMVCSA---YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 86
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ + K ++V D M ++ K + L+ + + +G
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRG 141
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGY 438
+ Y+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y
Sbjct: 142 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 198
Query: 439 LAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
APE L + KS D++S G ++ E++S R +
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL----VAVKQILDLDTKGDEDFT-NEVEIISKIRHR 320
++ + IG+GA G+V + NL VA+K+I + + T E++I+ + RH
Sbjct: 29 YTNLSYIGEGAYGMVCSA---YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ + K ++V D M ++ K + L+ + + +G
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGY 438
+ Y+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 439 LAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
APE L + KS D++S G ++ E++S R +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL----VAVKQILDLDTKGDEDFT-NEVEIISKIRHR 320
++ + IG+GA G+V + NL VA+K+I + + T E++I+ + RH
Sbjct: 31 YTNLSYIGEGAYGMVCSA---YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 87
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ + K ++V D M ++ K + L+ + + +G
Sbjct: 88 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRG 142
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGY 438
+ Y+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y
Sbjct: 143 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 199
Query: 439 LAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
APE L + KS D++S G ++ E++S R +
Sbjct: 200 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL----VAVKQILDLDTKGDEDFT-NEVEIISKIRHR 320
++ + IG+GA G+V + NL VA+K+I + + T E++I+ + RH
Sbjct: 22 YTNLSYIGEGAYGMVCSA---YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 78
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ + K ++V D M ++ K + L+ + + +G
Sbjct: 79 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRG 133
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGY 438
+ Y+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y
Sbjct: 134 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 190
Query: 439 LAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
APE L + KS D++S G ++ E++S R +
Sbjct: 191 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL----VAVKQILDLDTKGDEDFT-NEVEIISKIRHR 320
++ + IG+GA G+V + NL VA+K+I + + T E++I+ + RH
Sbjct: 29 YTNLSYIGEGAYGMVCSA---YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ + K ++V D M ++ K + L+ + + +G
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGY 438
+ Y+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 439 LAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
APE L + KS D++S G ++ E++S R +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL----VAVKQILDLDTKGDEDFT-NEVEIISKIRHR 320
++ + IG+GA G+V + NL VA+K+I + + T E++I+ + RH
Sbjct: 23 YTNLSYIGEGAYGMVCSA---YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 79
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ + K ++V D M ++ K + L+ + + +G
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRG 134
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGY 438
+ Y+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y
Sbjct: 135 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 439 LAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
APE L + KS D++S G ++ E++S R +
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 108/214 (50%), Gaps = 23/214 (10%)
Query: 263 TNGFSQNNLIGQGASG--IVYKGTLRHGNLVAVKQILDLDTK---GDEDFTNEVEIISKI 317
++ + ++G+G+ G I+ K + G AVK I K E EV+++ ++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
H N++ L + G +LV + G L D I IS RK+ + +II V
Sbjct: 90 DHPNIMKLYEFF----EDKG-YFYLVGEVYTGGELFDEI-IS--RKRFSEVDAARIIRQV 141
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDS---ELNAKVADFGLAKQSLEGHSHLTTRVAG 434
GI Y+H K I HRD+K N+LL+S + N ++ DFGL+ E + ++ G
Sbjct: 142 LSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH-FEASKKMKDKI-G 196
Query: 435 TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T Y+APE L+G EK DV+S G+++ L+SG
Sbjct: 197 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKG--DEDFTNEVEIISKI 317
E + F + + +G G G+V+K + + LV ++++ L+ K E++++ +
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQR--KKIIV 375
++ G + + S + ++M G+L + +K P++ K+ +
Sbjct: 124 NSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSI 173
Query: 376 DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT 435
V KG+ YL K I HRD+K +NIL++S K+ DFG++ Q ++ + GT
Sbjct: 174 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGT 228
Query: 436 FGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
Y++PE + +SD++S G+ ++E+ GR
Sbjct: 229 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 35/227 (15%)
Query: 266 FSQNNLIGQGASGIVYKG-TLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
F + ++GQGA G V K A+K+I + K +EV +++ + H+ ++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST-ILSEVMLLASLNHQYVVR 66
Query: 325 LRGCCVTSDD-----SSGKRR---FLVYDYMPNGTLSDNI---SISHKRKQLTWPQRKKI 373
+ + ++ K++ F+ +Y NGTL D I +++ +R + W ++
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY-W----RL 121
Query: 374 IVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-------------Q 420
+ + ++Y+H GI HRD+K NI +D N K+ DFGLAK Q
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELM 466
+L G S T GT Y+A E G EK D+YS GI+ E++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 23/214 (10%)
Query: 263 TNGFSQNNLIGQGASG--IVYKGTLRHGNLVAVKQILDLDTK---GDEDFTNEVEIISKI 317
++ + ++G+G+ G I+ K + G AVK I K E EV+++ ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
H N++ L +LV + G L D I IS RK+ + +II V
Sbjct: 84 DHPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEI-IS--RKRFSEVDAARIIRQV 135
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDS---ELNAKVADFGLAKQSLEGHSHLTTRVAG 434
GI Y+H K I HRD+K N+LL+S + N ++ DFGL+ E + ++ G
Sbjct: 136 LSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH-FEASKKMKDKI-G 190
Query: 435 TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T Y+APE L+G EK DV+S G+++ L+SG
Sbjct: 191 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 111/237 (46%), Gaps = 26/237 (10%)
Query: 271 LIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI-----RHRNLLSL 325
+IG+G+ V L+ + + +++ + D++ + V+ + H L+ L
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII--VDVAKGIAY 383
C T R F V +Y+ G L + H ++Q P+ +++ + Y
Sbjct: 119 HSCFQTE-----SRLFFVIEYVNGGDL-----MFHMQRQRKLPEEHARFYSAEISLALNY 168
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEY 443
LH + GI +RD+K N+LLDSE + K+ D+G+ K+ L T+ GT Y+APE
Sbjct: 169 LH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTSTFCGTPNYIAPEI 224
Query: 444 ALYGQLTEKSDVYSFGIVILELMSGRKVLD---TSTSPFQLITDWAW--VLAKSGKV 495
D ++ G+++ E+M+GR D +S +P Q D+ + +L K ++
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 281
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 111/237 (46%), Gaps = 26/237 (10%)
Query: 271 LIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI-----RHRNLLSL 325
+IG+G+ V L+ + + +++ + D++ + V+ + H L+ L
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII--VDVAKGIAY 383
C T R F V +Y+ G L + H ++Q P+ +++ + Y
Sbjct: 87 HSCFQTE-----SRLFFVIEYVNGGDL-----MFHMQRQRKLPEEHARFYSAEISLALNY 136
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEY 443
LH + GI +RD+K N+LLDSE + K+ D+G+ K+ L T+ GT Y+APE
Sbjct: 137 LH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTSXFCGTPNYIAPEI 192
Query: 444 ALYGQLTEKSDVYSFGIVILELMSGRKVLD---TSTSPFQLITDWAW--VLAKSGKV 495
D ++ G+++ E+M+GR D +S +P Q D+ + +L K ++
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 249
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 111/237 (46%), Gaps = 26/237 (10%)
Query: 271 LIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI-----RHRNLLSL 325
+IG+G+ V L+ + + +++ + D++ + V+ + H L+ L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII--VDVAKGIAY 383
C T R F V +Y+ G L + H ++Q P+ +++ + Y
Sbjct: 72 HSCFQTE-----SRLFFVIEYVNGGDL-----MFHMQRQRKLPEEHARFYSAEISLALNY 121
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEY 443
LH + GI +RD+K N+LLDSE + K+ D+G+ K+ L T+ GT Y+APE
Sbjct: 122 LH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTSXFCGTPNYIAPEI 177
Query: 444 ALYGQLTEKSDVYSFGIVILELMSGRKVLD---TSTSPFQLITDWAW--VLAKSGKV 495
D ++ G+++ E+M+GR D +S +P Q D+ + +L K ++
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 234
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 107/200 (53%), Gaps = 17/200 (8%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLLSLRGCCV 330
+G GA G VYK + +A ++++ ++ + ED+ E+EI++ H ++ L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
GK +++ ++ P G + D I + R LT PQ + + + + + +LH
Sbjct: 79 ----HDGKL-WIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQMLEALNFLH---SK 128
Query: 391 GIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLT 450
I HRD+K+ N+L+ E + ++ADFG++ ++L+ + + GT ++APE + +
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMK 187
Query: 451 E-----KSDVYSFGIVILEL 465
+ K+D++S GI ++E+
Sbjct: 188 DTPYDYKADIWSLGITLIEM 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 111/237 (46%), Gaps = 26/237 (10%)
Query: 271 LIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI-----RHRNLLSL 325
+IG+G+ V L+ + + +++ + D++ + V+ + H L+ L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII--VDVAKGIAY 383
C T R F V +Y+ G L + H ++Q P+ +++ + Y
Sbjct: 76 HSCFQTE-----SRLFFVIEYVNGGDL-----MFHMQRQRKLPEEHARFYSAEISLALNY 125
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEY 443
LH + GI +RD+K N+LLDSE + K+ D+G+ K+ L T+ GT Y+APE
Sbjct: 126 LH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTSXFCGTPNYIAPEI 181
Query: 444 ALYGQLTEKSDVYSFGIVILELMSGRKVLD---TSTSPFQLITDWAW--VLAKSGKV 495
D ++ G+++ E+M+GR D +S +P Q D+ + +L K ++
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 238
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 40/228 (17%)
Query: 265 GFSQN----NLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD----------EDFTNE 310
GF +N ++G+G S +V + + +I+D+ G E E
Sbjct: 1 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKE 60
Query: 311 VEIISKIR-HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
V+I+ K+ H N++ L+ T+ FLV+D M G L D ++ ++ L+ +
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETN-----TFFFLVFDLMKKGELFDYLT---EKVTLSEKE 112
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+KI+ + + I LH K I HRD+K NILLD ++N K+ DFG + Q G
Sbjct: 113 TRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--L 167
Query: 430 TRVAGTFGYLAPE---------YALYGQLTEKSDVYSFGIVILELMSG 468
V GT YLAPE + YG+ + D++S G+++ L++G
Sbjct: 168 REVCGTPSYLAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAG 212
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 42/223 (18%)
Query: 271 LIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEI--ISKIRHRNLLSLRGC 328
LIG+G G VYKG+L VAVK + + ++F NE I + + H N+
Sbjct: 20 LIGRGRYGAVYKGSLDE-RPVAVK-VFSFANR--QNFINEKNIYRVPLMEHDNIARF--- 72
Query: 329 CVTSDD---SSGKRRFL-VYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ D+ + G+ +L V +Y PNG+L +S+ W ++ V +G+AYL
Sbjct: 73 -IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYL 127
Query: 385 HYGL------KPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH--------SHLTT 430
H L KP I HRD+ S N+L+ ++ ++DFGL+ + L G+ +
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR-LTGNRLVRPGEEDNAAI 186
Query: 431 RVAGTFGYLAPEYALYGQLT--------EKSDVYSFGIVILEL 465
GT Y+APE L G + ++ D+Y+ G++ E+
Sbjct: 187 SEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL----VAVKQILDLDTKGDEDFT-NEVEIISKIRHR 320
++ + IG+GA G+V + NL VA+K+I + + T E++I+ + RH
Sbjct: 29 YTNLSYIGEGAYGMVCSA---YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ + K ++V D M ++ K + L+ + + +G
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKCQHLSNDHICYFLYQILRG 140
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGY 438
+ Y+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 439 LAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
APE L + KS D++S G ++ E++S R +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 107/200 (53%), Gaps = 17/200 (8%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLLSLRGCCV 330
+G GA G VYK + +A ++++ ++ + ED+ E+EI++ H ++ L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
GK +++ ++ P G + D I + R LT PQ + + + + + +LH
Sbjct: 87 ----HDGKL-WIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQMLEALNFLH---SK 136
Query: 391 GIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLT 450
I HRD+K+ N+L+ E + ++ADFG++ ++L+ + + GT ++APE + +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMK 195
Query: 451 E-----KSDVYSFGIVILEL 465
+ K+D++S GI ++E+
Sbjct: 196 DTPYDYKADIWSLGITLIEM 215
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFT--NEVEIISKIRHRNLL 323
F++ + IG+G+ G VYKG H V +I+DL+ DE E+ ++S+ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
G + S + +++ +Y+ G+ D + K L I+ ++ KG+ Y
Sbjct: 81 RYFGSYLKS-----TKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDY 131
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEY 443
LH K HRDIK+ N+LL + + K+ADFG+A Q + V F ++APE
Sbjct: 132 LHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEV 187
Query: 444 ALYGQLTEKSDVYSFGIVILELMSG 468
K+D++S GI +EL G
Sbjct: 188 IKQSAYDFKADIWSLGITAIELAKG 212
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFT-NEVEIISKIRHRNLL 323
++ + IG+GA G+V + VA+K+I + + T E++I+ + RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
+ K ++V D M ++ K + L+ + + +G+ Y
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAP 441
+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y AP
Sbjct: 140 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 442 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
E L + KS D++S G ++ E++S R +
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFT-NEVEIISKIRHRNLL 323
++ + IG+GA G+V + VA+K+I + + T E++I+ + RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
+ K ++V D M ++ K + L+ + + +G+ Y
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAP 441
+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y AP
Sbjct: 140 IHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 442 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
E L + KS D++S G ++ E++S R +
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL----VAVKQILDLDTKGDEDFT-NEVEIISKIRHR 320
++ + IG+GA G+V + NL VA+++I + + T E++I+ + RH
Sbjct: 29 YTNLSYIGEGAYGMVCSA---YDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ + K ++V D M ++ K + L+ + + +G
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGY 438
+ Y+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 439 LAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
APE L + KS D++S G ++ E++S R +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 108/225 (48%), Gaps = 45/225 (20%)
Query: 272 IGQGASGIVYKGTL------RHGNLVAVKQILD-LDTKGDEDFTNEVEIISKIRHRNLLS 324
+G+ G VYKG L VA+K + D + E+F +E + ++++H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-------------RKQLTWPQRK 371
L G VT D +++ Y +G L + + + + L P
Sbjct: 94 LLGV-VTKDQPLS----MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 372 KIIVDVAKGIAYL--HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ-------SL 422
++ +A G+ YL H+ + H+D+ + N+L+ +LN K++D GL ++ L
Sbjct: 149 HLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 203
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
G+S L R ++APE +YG+ + SD++S+G+V+ E+ S
Sbjct: 204 LGNSLLPIR------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 17/167 (10%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
E EV+++ ++ H N++ L +LV + G L D I IS RK+
Sbjct: 94 ESLLREVQLLKQLDHPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEI-IS--RKR 145
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS---ELNAKVADFGLAKQS 421
+ +II V GI Y+H K I HRD+K N+LL+S + N ++ DFGL+
Sbjct: 146 FSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH- 201
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
E + ++ GT Y+APE L+G EK DV+S G+++ L+SG
Sbjct: 202 FEASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFT-NEVEIISKIRHRNLL 323
++ + IG+GA G+V + VA+K+I + + T E++I+ + RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
+ K ++V D M ++ K + L+ + + +G+ Y
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 141
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAP 441
+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y AP
Sbjct: 142 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 442 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
E L + KS D++S G ++ E++S R +
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 17/167 (10%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
E EV+++ ++ H N++ L +LV + G L D I IS RK+
Sbjct: 95 ESLLREVQLLKQLDHPNIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEI-IS--RKR 146
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS---ELNAKVADFGLAKQS 421
+ +II V GI Y+H K I HRD+K N+LL+S + N ++ DFGL+
Sbjct: 147 FSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH- 202
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
E + ++ GT Y+APE L+G EK DV+S G+++ L+SG
Sbjct: 203 FEASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 108/225 (48%), Gaps = 45/225 (20%)
Query: 272 IGQGASGIVYKGTL------RHGNLVAVKQILD-LDTKGDEDFTNEVEIISKIRHRNLLS 324
+G+ G VYKG L VA+K + D + E+F +E + ++++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-------------RKQLTWPQRK 371
L G VT D +++ Y +G L + + + + L P
Sbjct: 77 LLGV-VTKDQPLS----MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 372 KIIVDVAKGIAYL--HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ-------SL 422
++ +A G+ YL H+ + H+D+ + N+L+ +LN K++D GL ++ L
Sbjct: 132 HLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 186
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
G+S L R ++APE +YG+ + SD++S+G+V+ E+ S
Sbjct: 187 LGNSLLPIR------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFT-NEVEIISKIRHRNLL 323
++ + IG+GA G+V + VA+K+I + + T E++I+ + RH N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
+ K ++V D M ++ K + L+ + + +G+ Y
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 159
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAP 441
+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y AP
Sbjct: 160 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 442 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
E L + KS D++S G ++ E++S R +
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFT--NEVEIISKIRHRNLL 323
F++ IG+G+ G V+KG V +I+DL+ DE E+ ++S+ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
G + G + +++ +Y+ G+ D + + Q ++ ++ KG+ Y
Sbjct: 85 KYYGSYL-----KGSKLWIIMEYLGGGSALDLL----RAGPFDEFQIATMLKEILKGLDY 135
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEY 443
LH K HRDIK+ N+LL + + K+ADFG+A Q + T V F ++APE
Sbjct: 136 LHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPEV 191
Query: 444 ALYGQLTEKSDVYSFGIVILELMSGR 469
K+D++S GI +EL G
Sbjct: 192 IQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFT-NEVEIISKIRHRNLL 323
++ + IG+GA G+V + VA+K+I + + T E++I+ + RH N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
+ K ++V D M ++ K + L+ + + +G+ Y
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 147
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAP 441
+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y AP
Sbjct: 148 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 442 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
E L + KS D++S G ++ E++S R +
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFT-NEVEIISKIRHRNLL 323
++ + IG+GA G+V + VA+K+I + + T E++I+ + RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
+ K ++V D M ++ K + L+ + + +G+ Y
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAP 441
+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y AP
Sbjct: 140 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 442 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
E L + KS D++S G ++ E++S R +
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 13/206 (6%)
Query: 272 IGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFT-NEVEIISKIRHRNLLSLRGCC 329
IG+GA G+V + VA+K+I + + T E++I+ + RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
K ++V D M ++ K + L+ + + +G+ Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA-- 143
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAPEYALYG 447
+ HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y APE L
Sbjct: 144 -NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 448 QLTEKS-DVYSFGIVILELMSGRKVL 472
+ KS D++S G ++ E++S R +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 269 NNLIGQGASGIVYKGTLR-HGNLVAVK-----QILDLDTKGDEDFTNEVEIISKIRHRNL 322
+ +G G G V G + G+ VAVK +I LD G E++ + RH ++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK--IKREIQNLKLFRHPHI 73
Query: 323 LSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
+ L T D F+V +Y+ G L D I K ++ + +++ + +
Sbjct: 74 IKLYQVISTPTDF-----FMVMEYVSGGELFDYIC---KHGRVEEMEARRLFQQILSAVD 125
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPE 442
Y H + + HRD+K N+LLD+ +NAK+ADFGL+ +G T+ G+ Y APE
Sbjct: 126 YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPE 180
Query: 443 YALYGQLTE--KSDVYSFGIVILELMSGRKVLDTSTSP 478
+ G+L + D++S G+++ L+ G D P
Sbjct: 181 -VISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 244 SVLPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH-GNLVAVKQILDLDTK 302
S+ N +W + N F Q ++G+G G V +R G + A K++ K
Sbjct: 164 SIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK 223
Query: 303 ---GDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISIS 359
G+ NE +I+ K+ R ++SL T D LV M G L +I
Sbjct: 224 KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC-----LVLTLMNGGDLKFHI--- 275
Query: 360 HKRKQLTWPQRKKII--VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGL 417
+ Q +P+ + + ++ G+ LH + I +RD+K NILLD + +++D GL
Sbjct: 276 YHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGL 332
Query: 418 AKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTS 477
A EG + + RV GT GY+APE + T D ++ G ++ E+++G+ S
Sbjct: 333 AVHVPEGQT-IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ-------S 383
Query: 478 PFQ 480
PFQ
Sbjct: 384 PFQ 386
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 13/206 (6%)
Query: 272 IGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLLSLRGCC 329
IG+GA G+V + VA+K+I + + + E++I+ + RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
K ++V D M ++ K + L+ + + +G+ Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA-- 143
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAPEYALYG 447
+ HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y APE L
Sbjct: 144 -NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 448 QLTEKS-DVYSFGIVILELMSGRKVL 472
+ KS D++S G ++ E++S R +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 261 QATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI-RH 319
Q T+G+ IG G+ + + + N+ +I+D K D T E+EI+ + +H
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIID---KSKRDPTEEIEILLRYGQH 75
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
N+++L+ DD GK ++V + M G L D I ++K + + ++ + K
Sbjct: 76 PNIITLKDVY---DD--GKYVYVVTELMKGGELLDKIL---RQKFFSEREASAVLFTITK 127
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSE----LNAKVADFGLAKQSLEGHSHLTTRVAGT 435
+ YLH G+ HRD+K +NIL E + ++ DFG AKQ L + L T
Sbjct: 128 TVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAENGLLMTPCYT 183
Query: 436 FGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
++APE D++S G+++ +++G
Sbjct: 184 ANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKG--DEDFTNEVEIISKI 317
E + F + + +G G G+V+K + + LV ++++ L+ K E++++ +
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQR--KKIIV 375
++ G + + S + ++M G+L + +K P++ K+ +
Sbjct: 81 NSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVL-----KKAGRIPEQILGKVSI 130
Query: 376 DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT 435
V KG+ YL K I HRD+K +NIL++S K+ DFG++ Q ++ + GT
Sbjct: 131 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGT 185
Query: 436 FGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
Y++PE + +SD++S G+ ++E+ GR
Sbjct: 186 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 21/216 (9%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHRNLLSLRGCC 329
+G+G G+VYK G +VA+K+I LD + +G E+ ++ ++ H N++SL
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
S + LV+++M + + L Q K + + +G+A+ H +
Sbjct: 89 -----HSERCLTLVFEFMEKDLKK---VLDENKTGLQDSQIKIYLYQLLRGVAHCH---Q 137
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFGYLAPEYALY 446
I HRD+K N+L++S+ K+ADFGLA+ + ++H T Y AP+ +
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMG 193
Query: 447 GQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQL 481
+ S D++S G + E+++G+ + T QL
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 21/216 (9%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHRNLLSLRGCC 329
+G+G G+VYK G +VA+K+I LD + +G E+ ++ ++ H N++SL
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
S + LV+++M + + L Q K + + +G+A+ H +
Sbjct: 89 -----HSERCLTLVFEFMEKDLKK---VLDENKTGLQDSQIKIYLYQLLRGVAHCH---Q 137
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFGYLAPEYALY 446
I HRD+K N+L++S+ K+ADFGLA+ + ++H T Y AP+ +
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMG 193
Query: 447 GQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQL 481
+ S D++S G + E+++G+ + T QL
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 21/223 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDF---TNEVEIISKI 317
+ F ++G+G+ G V ++ G+L AVK + D+D E I+S
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
R+ L+ CC + D R F V +++ G L +I K ++ + + ++
Sbjct: 81 RNHPFLTQLFCCFQTPD----RLFFVMEFVNGGDLMFHI---QKSRRFDEARARFYAAEI 133
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
+ +LH GI +RD+K N+LLD E + K+ADFG+ K+ + + T GT
Sbjct: 134 ISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI-CNGVTTATFCGTPD 189
Query: 438 YLAPEY---ALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTS 477
Y+APE LYG D ++ G+++ E++ G +
Sbjct: 190 YIAPEILQEMLYGPAV---DWWAMGVLLYEMLCGHAPFEAENE 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFT-NEVEIISKIRHRNLL 323
++ + IG+GA G+V + VA+K+I + + T E++I+ RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
+ K ++V D M ++ K + L+ + + +G+ Y
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 141
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAP 441
+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y AP
Sbjct: 142 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 442 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
E L + KS D++S G ++ E++S R +
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL----VAVKQILDLDTKGDEDFT-NEVEIISKIRHR 320
++ + IG+GA G+V + NL VA+K+I + + T E++I+ + RH
Sbjct: 29 YTNLSYIGEGAYGMVCSA---YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ + K ++V D M ++ K + L+ + + +G
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGY 438
+ Y+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 197
Query: 439 LAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
APE L + KS D++S G ++ E++S R +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 244 SVLPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH-GNLVAVKQILDLDTK 302
S+ N +W + N F Q ++G+G G V +R G + A K++ K
Sbjct: 164 SIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK 223
Query: 303 ---GDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISIS 359
G+ NE +I+ K+ R ++SL T D LV M G L +I
Sbjct: 224 KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC-----LVLTLMNGGDLKFHI--- 275
Query: 360 HKRKQLTWPQRKKII--VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGL 417
+ Q +P+ + + ++ G+ LH + I +RD+K NILLD + +++D GL
Sbjct: 276 YHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGL 332
Query: 418 AKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTS 477
A EG + + RV GT GY+APE + T D ++ G ++ E+++G+ S
Sbjct: 333 AVHVPEGQT-IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ-------S 383
Query: 478 PFQ 480
PFQ
Sbjct: 384 PFQ 386
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL----VAVKQILDLDTKGDEDFT-NEVEIISKIRHR 320
++ + IG+GA G+V + NL VA+K+I + + T E++I+ + RH
Sbjct: 30 YTNLSYIGEGAYGMVCSA---YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 86
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ + K ++V D M ++ K + L+ + + +G
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRG 141
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGY 438
+ Y+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T Y
Sbjct: 142 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 198
Query: 439 LAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
APE L + KS D++S G ++ E++S R +
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 21/228 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L D + S + P K + +
Sbjct: 61 HPNIVKLLDVIHTEN-----KLYLVFEFL-HQDLKDFMDAS-ALTGIPLPLIKSYLFQLL 113
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 114 QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 166
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 96/211 (45%), Gaps = 27/211 (12%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI--RHRNLLSLRGCC 329
IG+G G V+ G R G VAVK T + + E EI + RH N+L
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFF---TTEEASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL- 388
+ S + +L+ DY NG+L D + K L K+ G+ +LH +
Sbjct: 101 IKGT-GSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 389 ----KPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHL----TTRVAGTFGYLA 440
KP I HRD+KS NIL+ +AD GLA + + + + TRV GT Y+
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMP 214
Query: 441 PEY------ALYGQLTEKSDVYSFGIVILEL 465
PE + Q +D+YSFG+++ E+
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 24/218 (11%)
Query: 269 NNLIGQGASGIVYKGTLR-HGNLVAVK-----QILDLDTKGDEDFTNEVEIISKIRHRNL 322
+ +G G G V G + G+ VAVK +I LD G E++ + RH ++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK--IKREIQNLKLFRHPHI 73
Query: 323 LSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
+ L T D F+V +Y+ G L D I K ++ + +++ + +
Sbjct: 74 IKLYQVISTPTDF-----FMVMEYVSGGELFDYIC---KHGRVEEMEARRLFQQILSAVD 125
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPE 442
Y H + + HRD+K N+LLD+ +NAK+ADFGL+ +G G+ Y APE
Sbjct: 126 YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRDSCGSPNYAAPE 180
Query: 443 YALYGQLTE--KSDVYSFGIVILELMSGRKVLDTSTSP 478
+ G+L + D++S G+++ L+ G D P
Sbjct: 181 -VISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 272 IGQGASGIVYKGTLRHGN-LVAVK---QILDLDTKGDEDFTNEVEIISKIRHRNLLSLRG 327
IG+G G V+ G LR N LVAVK + L D K F E I+ + H N++ L G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK--FLQEARILKQYSHPNIVRLIG 179
Query: 328 CCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYG 387
C ++V + + G + R ++ +++ D A G+ YL
Sbjct: 180 VCTQKQPI-----YIVMELVQGGDFLTFLRTEGARLRVK--TLLQMVGDAAAGMEYLE-- 230
Query: 388 LKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT-FGYLAPEYALY 446
HRD+ + N L+ + K++DFG++++ +G + + + APE Y
Sbjct: 231 -SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNY 289
Query: 447 GQLTEKSDVYSFGIVILELMS 467
G+ + +SDV+SFGI++ E S
Sbjct: 290 GRYSSESDVWSFGILLWETFS 310
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 24/222 (10%)
Query: 272 IGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGD-EDFTNEVEIISKIRH-RNLLSLRGC 328
+G G G V+K R G+++AVKQ+ K + + +++++ K ++ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQR--KKIIVDVAKGIAYLHY 386
+T+ D F+ + M GT ++ + KR Q P+R K+ V + K + YL
Sbjct: 93 FITNTDV-----FIAMELM--GTCAEKLK---KRMQGPIPERILGKMTVAIVKALYYLKE 142
Query: 387 GLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALY 446
K G+ HRD+K +NILLD K+ DFG++ + ++ + R AG Y+APE
Sbjct: 143 --KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA--KDRSAGCAAYMAPERIDP 198
Query: 447 GQLTE-----KSDVYSFGIVILELMSGRKVLDTSTSPFQLIT 483
T+ ++DV+S GI ++EL +G+ + F+++T
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLT 240
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 21/227 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L D + S + P K + +
Sbjct: 64 HPNIVKLLDVIHTEN-----KLYLVFEFL-SMDLKDFMDAS-ALTGIPLPLIKSYLFQLL 116
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 117 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 169
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQL 481
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 216
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKGDEDFTNEVEIISKIRHRN 321
+ + +IG GA+ +V VA+K+I L+ ++ E++ +S+ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISI-----SHKRKQLTWPQRKKIIVD 376
++S V D+ +LV + G++ D I HK L I+ +
Sbjct: 70 IVSYYTSFVVKDE-----LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF 436
V +G+ YLH K G HRD+K+ NILL + + ++ADFG++ G +V TF
Sbjct: 125 VLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 437 G----YLAPEYALYGQLTE-KSDVYSFGIVILELMSG 468
++APE + + K+D++SFGI +EL +G
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 19/201 (9%)
Query: 272 IGQGASGIVYKGTLRHGN----LVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRG 327
+G G+ G V+ RH + +K+ + + K E +E ++S + H ++ + G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 328 CCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYG 387
++ F++ DY+ G L S+ K ++ P K +V + YLH
Sbjct: 74 TF-----QDAQQIFMIMDYIEGGEL---FSLLRKSQRFPNPVAKFYAAEVCLALEYLH-- 123
Query: 388 LKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYG 447
I +RD+K NILLD + K+ DFG AK + +T + GT Y+APE
Sbjct: 124 -SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAPEVVSTK 178
Query: 448 QLTEKSDVYSFGIVILELMSG 468
+ D +SFGI+I E+++G
Sbjct: 179 PYNKSIDWWSFGILIYEMLAG 199
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 21/228 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L D + S + P K + +
Sbjct: 63 HPNIVKLLDVIHTEN-----KLYLVFEFL-SMDLKDFMDAS-ALTGIPLPLIKSYLFQLL 115
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 116 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 168
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 271 LIGQGASGIVYKGTLRHGNLVAVKQILD----LDTKGDEDFTNEVEIISK-IRHRNLLSL 325
+IG+G+ G V + + ++L L K ++ +E ++ K ++H L+ L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
T+D + + V DY+ G L ++ + + P+ + ++A + YLH
Sbjct: 105 HFSFQTAD-----KLYFVLDYINGGELFYHLQ---RERCFLEPRARFYAAEIASALGYLH 156
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
I +RD+K NILLDS+ + + DFGL K+++E H+ T+ GT YLAPE L
Sbjct: 157 ---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE-HNSTTSTFCGTPEYLAPE-VL 211
Query: 446 YGQLTEKS-DVYSFGIVILELMSG 468
+ Q +++ D + G V+ E++ G
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKGDEDFTNEVEIISKIRHRN 321
+ + +IG GA+ +V VA+K+I L+ ++ E++ +S+ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISI-----SHKRKQLTWPQRKKIIVD 376
++S V D+ +LV + G++ D I HK L I+ +
Sbjct: 75 IVSYYTSFVVKDE-----LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF 436
V +G+ YLH K G HRD+K+ NILL + + ++ADFG++ G +V TF
Sbjct: 130 VLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 437 G----YLAPEYALYGQLTE-KSDVYSFGIVILELMSG 468
++APE + + K+D++SFGI +EL +G
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFT-NEVEIISKIRHRNLL 323
++ + IG+GA G+V + VA+K+I + + T E++I+ RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
+ K ++V D M ++ K + L+ + + +G+ Y
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQILRGLKY 141
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAP 441
+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y AP
Sbjct: 142 IHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 442 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
E L + KS D++S G ++ E++S R +
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Query: 270 NLIGQGASGIVYKGT-LRHGNLVAVK---QILDLDT--KGDEDFTNEVEIISKIRHRNLL 323
++G GA G VYKG + G V + ++L +T K +++ +E +++ + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR----KQLTWPQRKKIIVDVAK 379
L G C+TS LV MP G L D++ + R L W + +AK
Sbjct: 83 RLLGICLTSTVQ------LVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAK 130
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEGHSHLTTRVAGTFGY 438
G++YL + HRD+ + N+L+ S + K+ DFGLA+ ++ + +
Sbjct: 131 GMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKW 187
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMS 467
+A E L + T +SDV+S+G+ + ELM+
Sbjct: 188 MALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 30/255 (11%)
Query: 271 LIGQGASGIVYKG-TLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCC 329
++G+G GIVY G L + +A+K+I + D++ + E+ + ++H+N++ G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG-- 86
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISIS----HKRKQLTWPQRKKIIVDVAKGIAYLH 385
S +G + + + +P G+LS + +Q K+I+ +G+ YLH
Sbjct: 87 --SFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL----EGLKYLH 139
Query: 386 YGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
I HRDIK N+L+++ K++DFG +K+ L G + T GT Y+APE
Sbjct: 140 ---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR-LAGINPCTETFTGTLQYMAPEII 195
Query: 445 LYGQ--LTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSG--KVDDIFD 500
G + +D++S G I+E+ +G+ PF + + + K G KV
Sbjct: 196 DKGPRGYGKAADIWSLGCTIIEMATGK-------PPFYELGEPQAAMFKVGMFKVHPEIP 248
Query: 501 EFIRAEGARAVMERF 515
E + AE +++ F
Sbjct: 249 ESMSAEAKAFILKCF 263
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 272 IGQGASGIVYKGTLRHGN-LVAVK---QILDLDTKGDEDFTNEVEIISKIRHRNLLSLRG 327
IG+G G V+ G LR N LVAVK + L D K F E I+ + H N++ L G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK--FLQEARILKQYSHPNIVRLIG 179
Query: 328 CCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYG 387
C ++V + + G + R ++ +++ D A G+ YL
Sbjct: 180 VCTQKQPI-----YIVMELVQGGDFLTFLRTEGARLRVK--TLLQMVGDAAAGMEYLE-- 230
Query: 388 LKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGT-FGYLAPEYALY 446
HRD+ + N L+ + K++DFG++++ +G + + + APE Y
Sbjct: 231 -SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNY 289
Query: 447 GQLTEKSDVYSFGIVILELMS 467
G+ + +SDV+SFGI++ E S
Sbjct: 290 GRYSSESDVWSFGILLWETFS 310
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 35/227 (15%)
Query: 266 FSQNNLIGQGASGIVYKG-TLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
F + ++GQGA G V K A+K+I + K +EV +++ + H+ ++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST-ILSEVMLLASLNHQYVVR 66
Query: 325 LRGCCVTSDD-----SSGKRR---FLVYDYMPNGTLSDNI---SISHKRKQLTWPQRKKI 373
+ + ++ K++ F+ +Y N TL D I +++ +R + W ++
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY-W----RL 121
Query: 374 IVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-------------Q 420
+ + ++Y+H GI HRD+K NI +D N K+ DFGLAK Q
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELM 466
+L G S T GT Y+A E G EK D+YS GI+ E++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 272 IGQGASGIVYKGTLRHGN------LVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+G GA G VY+G + VAVK + ++ ++ DE DF E IISK+ H+N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR----KQLTWPQRKKIIVDVAKG 380
G + S RF++ + M G L + + R L + D+A G
Sbjct: 113 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSE---LNAKVADFGLAKQSLEGHSHLTTRVAG-TF 436
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 168 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 30/255 (11%)
Query: 271 LIGQGASGIVYKG-TLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCC 329
++G+G GIVY G L + +A+K+I + D++ + E+ + ++H+N++ G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG-- 72
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISIS----HKRKQLTWPQRKKIIVDVAKGIAYLH 385
S +G + + + +P G+LS + +Q K+I+ +G+ YLH
Sbjct: 73 --SFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL----EGLKYLH 125
Query: 386 YGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
I HRDIK N+L+++ K++DFG +K+ L G + T GT Y+APE
Sbjct: 126 ---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR-LAGINPCTETFTGTLQYMAPEII 181
Query: 445 LYGQ--LTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSG--KVDDIFD 500
G + +D++S G I+E+ +G+ PF + + + K G KV
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGK-------PPFYELGEPQAAMFKVGMFKVHPEIP 234
Query: 501 EFIRAEGARAVMERF 515
E + AE +++ F
Sbjct: 235 ESMSAEAKAFILKCF 249
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFT-NEVEIISKIRHRNLL 323
++ + IG+GA G+V + VA+K+I + + T E++I+ + RH N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
+ K +LV M ++ K + L+ + + +G+ Y
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLM-----GADLYKLLKTQHLSNDHICYFLYQILRGLKY 159
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAP 441
+H + HRD+K +N+LL++ + K+ DFGLA+ + H H T T Y AP
Sbjct: 160 IHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 442 EYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
E L + KS D++S G ++ E++S R +
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 112/230 (48%), Gaps = 25/230 (10%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNG--TLSDNISISHKRKQLTWPQRKKIIVD 376
H N++ L T + + +LV++++ T D +++ + P K +
Sbjct: 64 HPNIVKLLDVIHTEN-----KLYLVFEFLHQDLKTFMDASALT----GIPLPLIKSYLFQ 114
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVA 433
+ +G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H
Sbjct: 115 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--- 168
Query: 434 GTFGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
T Y APE L + + D++S G + E+++ R + + QL
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 272 IGQGASGIVYKGTLRHGN------LVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+G GA G VY+G + VAVK + ++ ++ DE DF E IISK+ H+N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR----KQLTWPQRKKIIVDVAKG 380
G + S RF++ + M G L + + R L + D+A G
Sbjct: 99 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSE---LNAKVADFGLAKQSLEGHSHLTTRVAG-TF 436
YL HRDI + N LL AK+ DFG+A+ + A
Sbjct: 154 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 210
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 272 IGQGASGIVYKGTLRHGN------LVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+G GA G VY+G + VAVK + ++ ++ DE DF E IISK H+N++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR----KQLTWPQRKKIIVDVAKG 380
G + S RF++ + M G L + + R L + D+A G
Sbjct: 90 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 144
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSE---LNAKVADFGLAKQSLEGHSHLTTRVAG-TF 436
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 145 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 201
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 272 IGQGASGIVYKGTLRHGN------LVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+G GA G VY+G + VAVK + ++ ++ DE DF E IISK H+N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR----KQLTWPQRKKIIVDVAKG 380
G + S RF++ + M G L + + R L + D+A G
Sbjct: 98 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSE---LNAKVADFGLAKQSLEGHSHLTTRVAG-TF 436
YL HRDI + N LL AK+ DFG+A+ + A
Sbjct: 153 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 272 IGQGASGIVYKGTLRHGN------LVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+G GA G VY+G + VAVK + ++ ++ DE DF E IISK H+N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR----KQLTWPQRKKIIVDVAKG 380
G + S RF++ + M G L + + R L + D+A G
Sbjct: 113 CIGVSLQS-----LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSE---LNAKVADFGLAKQSLEGHSHLTTRVAG-TF 436
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 168 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 18/217 (8%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKIRH 319
+ F +G+G G VY + + ++L L+ +G + E+EI S +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
N+L + KR +L+ ++ P G L + K + + + ++A
Sbjct: 74 PNILRMYNYF-----HDRKRIYLMLEFAPRGELYKELQ---KHGRFDEQRSATFMEELAD 125
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYL 439
+ Y H + + HRDIK N+L+ + K+ADFG S+ S + GT YL
Sbjct: 126 ALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGW---SVHAPSLRRRXMCGTLDYL 179
Query: 440 APEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTST 476
PE EK D++ G++ E + G D+ +
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 11/226 (4%)
Query: 261 QATNGFSQNNLIGQGASGIVYKGTLRH-GNLVAVKQIL-DLDTKGDEDFTNEVEIISKIR 318
Q + +G G G V + + G VA+KQ +L K E + E++I+ K+
Sbjct: 12 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 71
Query: 319 HRNLLSLRGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
H N++S R + L +Y G L ++ L + ++ D+
Sbjct: 72 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 131
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLD---SELNAKVADFGLAKQSLEGHSHLTTRVAG 434
+ + YLH I HRD+K NI+L L K+ D G AK+ +G L T G
Sbjct: 132 SSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVG 186
Query: 435 TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ 480
T YLAPE + T D +SFG + E ++G + + P Q
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 232
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 272 IGQGASGIVYKGTLRHGN------LVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+G GA G VY+G + VAVK + ++ ++ DE DF E IISK H+N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR----KQLTWPQRKKIIVDVAKG 380
G + S RF++ + M G L + + R L + D+A G
Sbjct: 98 CIGVSLQS-----LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSE---LNAKVADFGLAKQSLEGHSHLTTRVAG-TF 436
YL HRDI + N LL AK+ DFG+A+ + A
Sbjct: 153 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 11/226 (4%)
Query: 261 QATNGFSQNNLIGQGASGIVYKGTLRH-GNLVAVKQIL-DLDTKGDEDFTNEVEIISKIR 318
Q + +G G G V + + G VA+KQ +L K E + E++I+ K+
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 70
Query: 319 HRNLLSLRGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
H N++S R + L +Y G L ++ L + ++ D+
Sbjct: 71 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 130
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLD---SELNAKVADFGLAKQSLEGHSHLTTRVAG 434
+ + YLH I HRD+K NI+L L K+ D G AK+ +G L T G
Sbjct: 131 SSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVG 185
Query: 435 TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ 480
T YLAPE + T D +SFG + E ++G + + P Q
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 231
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 17/167 (10%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
E+ NE+ ++ + H N++ L K +LV ++ G L + I HK +
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVF-----EDKKYFYLVTEFYEGGELFEQIINRHKFDE 145
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSE---LNAKVADFGLAKQS 421
I+ + GI YLH K I HRDIK NILL+++ LN K+ DFGL+ S
Sbjct: 146 CDAAN---IMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLS--S 197
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+ GT Y+APE L + EK DV+S G+++ L+ G
Sbjct: 198 FFSKDYKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 18/217 (8%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKIRH 319
+ F +G+G G VY + + ++L L+ +G + E+EI S +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
N+L + KR +L+ ++ P G L + K + + + ++A
Sbjct: 75 PNILRMYNYF-----HDRKRIYLMLEFAPRGELYKELQ---KHGRFDEQRSATFMEELAD 126
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYL 439
+ Y H + + HRDIK N+L+ + K+ADFG S+ S + GT YL
Sbjct: 127 ALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGW---SVHAPSLRRRXMCGTLDYL 180
Query: 440 APEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTST 476
PE EK D++ G++ E + G D+ +
Sbjct: 181 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 217
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHR 320
F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ L T + + +LV++++ + L + S + P K + + +G
Sbjct: 70 NIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQG 122
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFG 437
+A+ H + HRD+K N+L+++E K+ADFGLA+ + ++H T
Sbjct: 123 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLW 175
Query: 438 YLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 221
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 14/149 (9%)
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
L L C T D R + V +Y+ G L +I + K+ P ++A G+
Sbjct: 83 LTQLHSCFQTMD-----RLYFVMEYVNGGDLMYHIQQVGRFKE---PHAVFYAAEIAIGL 134
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL-EGHSHLTTRVAGTFGYLA 440
+L GI +RD+K N++LDSE + K+ADFG+ K+++ +G + T GT Y+A
Sbjct: 135 FFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIA 189
Query: 441 PEYALYGQLTEKSDVYSFGIVILELMSGR 469
PE Y + D ++FG+++ E+++G+
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 25/227 (11%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHR 320
F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNG--TLSDNISISHKRKQLTWPQRKKIIVDVA 378
N++ L T + + +LV++++ T D +++ + P K + +
Sbjct: 62 NIVKLLDVIHTEN-----KLYLVFEHVHQDLKTFMDASALT----GIPLPLIKSYLFQLL 112
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + ++H T
Sbjct: 113 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----T 165
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQL 481
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKIRHRNLLSLRG 327
+G+G G VY + + ++L L+ +G + E+EI S +RH N+L +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 328 CCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYG 387
KR +L+ ++ P G L + K + + + ++A + Y H
Sbjct: 82 YF-----HDRKRIYLMLEFAPRGELYKELQ---KHGRFDEQRSATFMEELADALHYCH-- 131
Query: 388 LKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYG 447
+ + HRDIK N+L+ + K+ADFG S+ S + GT YL PE
Sbjct: 132 -ERKVIHRDIKPENLLMGYKGELKIADFGW---SVHAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 448 QLTEKSDVYSFGIVILELMSGRKVLDTST 476
EK D++ G++ E + G D+ +
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDSPS 216
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFT--NEVEIISKIRHRNLL 323
F++ IG+G+ G V+KG V +I+DL+ DE E+ ++S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
G + + +++ +Y+ G+ D + L Q I+ ++ KG+ Y
Sbjct: 69 KYYGSYLKDT-----KLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDY 119
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEY 443
LH K HRDIK+ N+LL K+ADFG+A Q + T V F ++APE
Sbjct: 120 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPEV 175
Query: 444 ALYGQLTEKSDVYSFGIVILELMSGR 469
K+D++S GI +EL G
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 14/149 (9%)
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
L L C T D R + V +Y+ G L +I + K+ P ++A G+
Sbjct: 404 LTQLHSCFQTMD-----RLYFVMEYVNGGDLMYHIQQVGRFKE---PHAVFYAAEIAIGL 455
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL-EGHSHLTTRVAGTFGYLA 440
+L GI +RD+K N++LDSE + K+ADFG+ K+++ +G + T GT Y+A
Sbjct: 456 FFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIA 510
Query: 441 PEYALYGQLTEKSDVYSFGIVILELMSGR 469
PE Y + D ++FG+++ E+++G+
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 30/227 (13%)
Query: 272 IGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDFT--NEVEIISKIRHRNLLSLRGC 328
IGQG G V+K R G VA+K++L + K T E++I+ ++H N+++L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 329 CVTSDDSSGKRR---FLVYDYMPN---GTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
C T + + +LV+D+ + G LS+ + + T + K+++ + G+
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV------KFTLSEIKRVMQMLLNGLY 139
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSH---LTTRVAGTFGY 438
Y+H + I HRD+K+ N+L+ + K+ADFGLA+ SL +S RV T Y
Sbjct: 140 YIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWY 195
Query: 439 LAPEYAL----YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
PE L YG D++ G ++ E+ + ++ +T QL
Sbjct: 196 RPPELLLGERDYG---PPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 239
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 272 IGQGASGIVYKGTLRHGN------LVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+G GA G VY+G + VAVK + ++ ++ DE DF E IISK H+N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR----KQLTWPQRKKIIVDVAKG 380
G + S RF++ + M G L + + R L + D+A G
Sbjct: 113 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSE---LNAKVADFGLAKQSLEGHSHLTTRVAG-TF 436
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 168 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 23/226 (10%)
Query: 272 IGQGASGIVYKGT-LRHGNLVAVKQI-LDLDTKGDEDFTNEVEI--ISKIRHRNLLSLRG 327
+G+G+ G V T + VA+K I L K D E EI + +RH +++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 328 CCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYG 387
T D +V +Y G L D I ++K++T + ++ + I Y H
Sbjct: 77 VITTPTDI-----VMVIEY-AGGELFDYIV---EKKRMTEDEGRRFFQQIICAIEYCH-- 125
Query: 388 LKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYG 447
+ I HRD+K N+LLD LN K+ADFGL+ +G+ T+ G+ Y APE + G
Sbjct: 126 -RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VING 181
Query: 448 QLTE--KSDVYSFGIVILELMSGRKVLDTSTSP--FQLITDWAWVL 489
+L + DV+S GIV+ ++ GR D P F+ + +V+
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVM 227
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 265 GFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
GF++ I + V+ G + V + L L E + E+ I + H++++
Sbjct: 33 GFAKCFEISDADTKEVFAGKI-------VPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 85
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
G +D F+V + +L + + +RK LT P+ + + + G YL
Sbjct: 86 FHGFFEDNDFV-----FVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYL 137
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H + + HRD+K N+ L+ +L K+ DFGLA + +E + GT Y+APE
Sbjct: 138 H---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK-VEYDGERKKTLCGTPNYIAPEVL 193
Query: 445 LYGQLTEKSDVYSFGIVILELMSGRKVLDTS 475
+ + DV+S G ++ L+ G+ +TS
Sbjct: 194 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFT--NEVEIISKIRHRNLL 323
F++ IG+G+ G V+KG V +I+DL+ DE E+ ++S+ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
G + + +++ +Y+ G+ D + L Q I+ ++ KG+ Y
Sbjct: 89 KYYGSYLKD-----TKLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDY 139
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEY 443
LH K HRDIK+ N+LL K+ADFG+A Q + T V F ++APE
Sbjct: 140 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPEV 195
Query: 444 ALYGQLTEKSDVYSFGIVILELMSGR 469
K+D++S GI +EL G
Sbjct: 196 IKQSAYDSKADIWSLGITAIELARGE 221
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 21/225 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHR 320
F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ L T + + +LV++++ + L + S + P K + + +G
Sbjct: 63 NIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQG 115
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFG 437
+A+ H + HRD+K N+L+++E K+ADFGLA+ + ++H T
Sbjct: 116 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLW 168
Query: 438 YLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQL 481
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 213
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 18/214 (8%)
Query: 272 IGQGASGIVYKGTLRHGNL---VAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLLSLRG 327
+G G G V +G R VA+K + K D E+ E +I+ ++ + ++ L G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 328 CCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYG 387
C + LV + G L + KR+++ +++ V+ G+ YL
Sbjct: 78 VC------QAEALMLVMEMAGGGPLHK--FLVGKREEIPVSNVAELLHQVSMGMKYLE-- 127
Query: 388 LKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYAL 445
+ HRD+ + N+LL + AK++DFGL+K S+ T R AG + + APE
Sbjct: 128 -EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 186
Query: 446 YGQLTEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
+ + + +SDV+S+G+ + E +S G+K P
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP 220
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 269 NNLIGQGASGIVYKGTL--RHGNLV--AVKQILDL-DTKGDEDFTNEVEIISKIRHRNLL 323
+ +IG+G G+VY G + N + A+K + + + + E F E ++ + H N+L
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKG 380
+L G + + ++ YM +G L I + P K +I + VA+G
Sbjct: 86 ALIGIMLPPEGLP----HVLLPYMCHGDLLQFIRSPQRN-----PTVKDLISFGLQVARG 136
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ-------SLEGHSHLTTRVA 433
+ YL + HRD+ + N +LD KVADFGLA+ S++ H H V
Sbjct: 137 MEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK 193
Query: 434 GTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
T A E + T KSDV+SFG+++ EL++ PF L
Sbjct: 194 WT----ALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL 237
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 263 TNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI-RHRN 321
++G+ IG G+ + + N+ +++D K D + E+EI+ + +H N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVID---KSKRDPSEEIEILLRYGQHPN 82
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
+++L+ DD GK +LV + M G L D I ++K + + ++ + K +
Sbjct: 83 IITLKDVY---DD--GKHVYLVTELMRGGELLDKIL---RQKFFSEREASFVLHTIGKTV 134
Query: 382 AYLHYGLKPGIYHRDIKSTNIL-LDSELNA---KVADFGLAKQSLEGHSHLTTRVAGTFG 437
YLH G+ HRD+K +NIL +D N ++ DFG AKQ L + L T
Sbjct: 135 EYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-LRAENGLLMTPCYTAN 190
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
++APE E D++S GI++ +++G
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 112/228 (49%), Gaps = 21/228 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L + S + P K + +
Sbjct: 62 HPNIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLL 114
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + ++H T
Sbjct: 115 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----T 167
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 272 IGQGASGIVYKGTLRHGN------LVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+G GA G VY+G + VAVK + ++ ++ DE DF E IISK H+N++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR----KQLTWPQRKKIIVDVAKG 380
G + S RF++ + M G L + + R L + D+A G
Sbjct: 115 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 169
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSE---LNAKVADFGLAKQSLEGHSHLTTRVAG-TF 436
YL HRDI + N LL AK+ DFG+A+ + A
Sbjct: 170 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 226
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 265 GFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
GF++ I + V+ G + V + L L E + E+ I + H++++
Sbjct: 29 GFAKCFEISDADTKEVFAGKI-------VPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
G +D F+V + +L + + +RK LT P+ + + + G YL
Sbjct: 82 FHGFFEDNDFV-----FVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYL 133
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H + + HRD+K N+ L+ +L K+ DFGLA + +E + GT Y+APE
Sbjct: 134 H---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK-VEYDGERKKTLCGTPNYIAPEVL 189
Query: 445 LYGQLTEKSDVYSFGIVILELMSGRKVLDTS 475
+ + DV+S G ++ L+ G+ +TS
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 30/227 (13%)
Query: 272 IGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDFT--NEVEIISKIRHRNLLSLRGC 328
IGQG G V+K R G VA+K++L + K T E++I+ ++H N+++L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 329 CVTSDDSSGKRR---FLVYDYMPN---GTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
C T + + +LV+D+ + G LS+ + + T + K+++ + G+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV------KFTLSEIKRVMQMLLNGLY 139
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSH---LTTRVAGTFGY 438
Y+H + I HRD+K+ N+L+ + K+ADFGLA+ SL +S RV T Y
Sbjct: 140 YIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWY 195
Query: 439 LAPEYAL----YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
PE L YG D++ G ++ E+ + ++ +T QL
Sbjct: 196 RPPELLLGERDYG---PPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 239
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 30/227 (13%)
Query: 272 IGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDFT--NEVEIISKIRHRNLLSLRGC 328
IGQG G V+K R G VA+K++L + K T E++I+ ++H N+++L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 329 CVTSDDSSGKRR---FLVYDYMPN---GTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
C T + + +LV+D+ + G LS+ + + T + K+++ + G+
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV------KFTLSEIKRVMQMLLNGLY 138
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSH---LTTRVAGTFGY 438
Y+H + I HRD+K+ N+L+ + K+ADFGLA+ SL +S RV T Y
Sbjct: 139 YIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWY 194
Query: 439 LAPEYAL----YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
PE L YG D++ G ++ E+ + ++ +T QL
Sbjct: 195 RPPELLLGERDYG---PPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 238
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 30/227 (13%)
Query: 272 IGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDFT--NEVEIISKIRHRNLLSLRGC 328
IGQG G V+K R G VA+K++L + K T E++I+ ++H N+++L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 329 CVTSDDSSGKRR---FLVYDYMPN---GTLSDNISISHKRKQLTWPQRKKIIVDVAKGIA 382
C T + + +LV+D+ + G LS+ + + T + K+++ + G+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV------KFTLSEIKRVMQMLLNGLY 139
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSH---LTTRVAGTFGY 438
Y+H + I HRD+K+ N+L+ + K+ADFGLA+ SL +S RV T Y
Sbjct: 140 YIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWY 195
Query: 439 LAPEYAL----YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
PE L YG D++ G ++ E+ + ++ +T QL
Sbjct: 196 RPPELLLGERDYG---PPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 239
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 263 TNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI-RHRN 321
++G+ IG G+ + + N+ +++D K D + E+EI+ + +H N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVID---KSKRDPSEEIEILLRYGQHPN 82
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
+++L+ DD GK +LV + M G L D I ++K + + ++ + K +
Sbjct: 83 IITLKDVY---DD--GKHVYLVTELMRGGELLDKIL---RQKFFSEREASFVLHTIGKTV 134
Query: 382 AYLHYGLKPGIYHRDIKSTNIL-LDSELNA---KVADFGLAKQSLEGHSHLTTRVAGTFG 437
YLH G+ HRD+K +NIL +D N ++ DFG AKQ L + L T
Sbjct: 135 EYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-LRAENGLLMTPCYTAN 190
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
++APE E D++S GI++ +++G
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHR 320
F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ L T + + +LV++++ + L + S + P K + + +G
Sbjct: 70 NIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQG 122
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFG 437
+A+ H + HRD+K N+L+++E K+ADFGLA+ + ++H T
Sbjct: 123 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLW 175
Query: 438 YLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 221
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 265 GFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
GF++ I + V+ G + V + L L E + E+ I + H++++
Sbjct: 29 GFAKCFEISDADTKEVFAGKI-------VPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
G +D F+V + +L + + +RK LT P+ + + + G YL
Sbjct: 82 FHGFFEDNDFV-----FVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYL 133
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H + + HRD+K N+ L+ +L K+ DFGLA + +E + GT Y+APE
Sbjct: 134 H---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK-VEYDGERKKTLCGTPNYIAPEVL 189
Query: 445 LYGQLTEKSDVYSFGIVILELMSGRKVLDTS 475
+ + DV+S G ++ L+ G+ +TS
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 272 IGQGASGIVYKGTLRHGN------LVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+G GA G VY+G + VAVK + ++ ++ DE DF E IISK H+N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR----KQLTWPQRKKIIVDVAKG 380
G + S RF++ + M G L + + R L + D+A G
Sbjct: 99 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSE---LNAKVADFGLAKQSLEGHSHLTTRVAG-TF 436
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 154 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 210
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 27/231 (11%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLT---WPQRKKIIV 375
H N++ L T + + +LV+++ LS ++ LT P K +
Sbjct: 64 HPNIVKLLDVIHTEN-----KLYLVFEF-----LSMDLKKFMDASALTGIPLPLIKSYLF 113
Query: 376 DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRV 432
+ +G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H
Sbjct: 114 QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 433 AGTFGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
T Y APE L + + D++S G + E+++ R + + QL
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHR 320
F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ L T + + +LV++++ + L + S + P K + + +G
Sbjct: 63 NIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQG 115
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFG 437
+A+ H + HRD+K N+L+++E K+ADFGLA+ + ++H T
Sbjct: 116 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLW 168
Query: 438 YLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHR 320
F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ L T + + +LV++++ + L + S + P K + + +G
Sbjct: 62 NIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQG 114
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFG 437
+A+ H + HRD+K N+L+++E K+ADFGLA+ + ++H T
Sbjct: 115 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLW 167
Query: 438 YLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHR 320
F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ L T + + +LV++++ + L + S + P K + + +G
Sbjct: 62 NIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQG 114
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFG 437
+A+ H + HRD+K N+L+++E K+ADFGLA+ + ++H T
Sbjct: 115 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLW 167
Query: 438 YLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHR 320
F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ L T + + +LV++++ + L + S + P K + + +G
Sbjct: 63 NIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQG 115
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFG 437
+A+ H + HRD+K N+L+++E K+ADFGLA+ + ++H T
Sbjct: 116 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLW 168
Query: 438 YLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 27/231 (11%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLT---WPQRKKIIV 375
H N++ L T + + +LV+++ LS ++ LT P K +
Sbjct: 62 HPNIVKLLDVIHTEN-----KLYLVFEF-----LSMDLKKFMDASALTGIPLPLIKSYLF 111
Query: 376 DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRV 432
+ +G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H
Sbjct: 112 QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 433 AGTFGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
T Y APE L + + D++S G + E+++ R + + QL
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 272 IGQGASGIVYKGTLRHGN------LVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+G GA G VY+G + VAVK + ++ ++ DE DF E IISK H+N++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR----KQLTWPQRKKIIVDVAKG 380
G + S RF++ + M G L + + R L + D+A G
Sbjct: 105 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 159
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSE---LNAKVADFGLAKQSLEGHSHLTTRVAG-TF 436
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 160 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 216
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
E E+ I+ K+ H N++ L DD + ++V++ + G + + ++ K
Sbjct: 81 EQVYQEIAILKKLDHPNVVKL---VEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KP 133
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
L+ Q + D+ KGI YLHY I HRDIK +N+L+ + + K+ADFG++ + +G
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNE-FKG 189
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYS 457
L + GT ++APE L+E ++S
Sbjct: 190 SDALLSNTVGTPAFMAPE-----SLSETRKIFS 217
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 23/218 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQI-LDLDTKGDEDFT-NEVEIISKIRHRNLLSLRGCC 329
IG+G G+VYK +G A+K+I L+ + +G T E+ I+ +++H N++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
T KR LV++++ + L + + L K ++ + GIAY H
Sbjct: 70 HTK-----KRLVLVFEHL-DQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCH---D 118
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFGYLAPEYALY 446
+ HRD+K N+L++ E K+ADFGLA+ + ++H T Y AP+ L
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPD-VLM 173
Query: 447 G--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
G + + D++S G + E+++G + + QL+
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLM 211
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 272 IGQGASGIVYKGTLRHGN------LVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+G GA G VY+G + VAVK + ++ ++ DE DF E IISK H+N++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR----KQLTWPQRKKIIVDVAKG 380
G + S RF++ + M G L + + R L + D+A G
Sbjct: 139 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSE---LNAKVADFGLAKQSLEGHSHLTTRVAG-TF 436
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 194 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 250
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 23/218 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQI-LDLDTKGDEDFT-NEVEIISKIRHRNLLSLRGCC 329
IG+G G+VYK +G A+K+I L+ + +G T E+ I+ +++H N++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
T KR LV++++ + L + + L K ++ + GIAY H
Sbjct: 70 HTK-----KRLVLVFEHL-DQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCH---D 118
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFGYLAPEYALY 446
+ HRD+K N+L++ E K+ADFGLA+ + ++H T Y AP+ L
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPD-VLM 173
Query: 447 G--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
G + + D++S G + E+++G + + QL+
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 272 IGQGASGIVYKGTLRHGN------LVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+G GA G VY+G + VAVK + ++ ++ DE DF E IISK H+N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR----KQLTWPQRKKIIVDVAKG 380
G + S RF++ + M G L + + R L + D+A G
Sbjct: 99 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSE---LNAKVADFGLAKQSLEGHSHLTTRVAG-TF 436
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 154 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPV 210
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHR 320
F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ L T + + +LV++++ + L + S + P K + + +G
Sbjct: 67 NIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQG 119
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFG 437
+A+ H + HRD+K N+L+++E K+ADFGLA+ + ++H T
Sbjct: 120 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLW 172
Query: 438 YLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 218
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 21/228 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L + S + P K + +
Sbjct: 64 HPNIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLL 116
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 117 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 169
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 21/228 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L + S + P K + +
Sbjct: 63 HPNIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLL 115
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 116 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 168
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 263 TNGFSQNNLIGQGASG--IVYKGTLRHGNLVAVKQILDLDTK---GDEDFTNEVEIISKI 317
++ + ++G+G+ G I+ K + G AVK I K E EV+++ ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
H N+ L +LV + G L D I IS RK+ + +II V
Sbjct: 84 DHPNIXKLYEFF-----EDKGYFYLVGEVYTGGELFDEI-IS--RKRFSEVDAARIIRQV 135
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDS---ELNAKVADFGLAKQSLEGHSHLTTRVAG 434
GI Y H K I HRD+K N+LL+S + N ++ DFGL+ E ++ G
Sbjct: 136 LSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH-FEASKKXKDKI-G 190
Query: 435 TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T Y+APE L+G EK DV+S G+++ L+SG
Sbjct: 191 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 272 IGQGASGIVYKGTLRHGN------LVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+G GA G VY+G + VAVK + ++ ++ DE DF E IISK H+N++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR----KQLTWPQRKKIIVDVAKG 380
G + S RF++ + M G L + + R L + D+A G
Sbjct: 116 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSE---LNAKVADFGLAKQSLEGHSHLTTRVAG-TF 436
YL + HRDI + N LL AK+ DFG+A+ + A
Sbjct: 171 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 227
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 265 GFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
GF++ I + V+ G + V + L L E + E+ I + H++++
Sbjct: 51 GFAKCFEISDADTKEVFAGKI-------VPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 103
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
G +D F+V + +L + + +RK LT P+ + + + G YL
Sbjct: 104 FHGFFEDNDFV-----FVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYL 155
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H + + HRD+K N+ L+ +L K+ DFGLA + +E + GT Y+APE
Sbjct: 156 H---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK-VEYDGERKKVLCGTPNYIAPEVL 211
Query: 445 LYGQLTEKSDVYSFGIVILELMSGRKVLDTS 475
+ + DV+S G ++ L+ G+ +TS
Sbjct: 212 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 265 GFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
GF++ I + V+ G + V + L L E + E+ I + H++++
Sbjct: 53 GFAKCFEISDADTKEVFAGKI-------VPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 105
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
G +D F+V + +L + + +RK LT P+ + + + G YL
Sbjct: 106 FHGFFEDNDFV-----FVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYL 157
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H + + HRD+K N+ L+ +L K+ DFGLA + +E + GT Y+APE
Sbjct: 158 H---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK-VEYDGERKKVLCGTPNYIAPEVL 213
Query: 445 LYGQLTEKSDVYSFGIVILELMSGRKVLDTS 475
+ + DV+S G ++ L+ G+ +TS
Sbjct: 214 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 21/228 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L + S + P K + +
Sbjct: 61 HPNIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLL 113
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 114 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 166
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 23/218 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQI-LDLDTKGDEDFT-NEVEIISKIRHRNLLSLRGCC 329
IG+G G+VYK +G A+K+I L+ + +G T E+ I+ +++H N++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLK 389
T KR LV++++ + L + + L K ++ + GIAY H
Sbjct: 70 HTK-----KRLVLVFEHL-DQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCH---D 118
Query: 390 PGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFGYLAPEYALY 446
+ HRD+K N+L++ E K+ADFGLA+ + ++H T Y AP+ L
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV----TLWYRAPD-VLM 173
Query: 447 G--QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
G + + D++S G + E+++G + + QL+
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 21/228 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L + S + P K + +
Sbjct: 63 HPNIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLL 115
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 116 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 168
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 21/228 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L + S + P K + +
Sbjct: 61 HPNIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLL 113
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 114 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 166
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 265 GFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
GF++ I + V+ G + V + L L E + E+ I + H++++
Sbjct: 27 GFAKCFEISDADTKEVFAGKI-------VPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 79
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
G +D F+V + +L + + +RK LT P+ + + + G YL
Sbjct: 80 FHGFFEDNDFV-----FVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYL 131
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H + + HRD+K N+ L+ +L K+ DFGLA + +E + GT Y+APE
Sbjct: 132 H---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK-VEYDGERKKVLCGTPNYIAPEVL 187
Query: 445 LYGQLTEKSDVYSFGIVILELMSGRKVLDTS 475
+ + DV+S G ++ L+ G+ +TS
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 21/228 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L + S + P K + +
Sbjct: 63 HPNIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLL 115
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 116 QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 168
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 21/228 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L + S + P K + +
Sbjct: 61 HPNIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLL 113
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 114 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 166
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 21/228 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L + S + P K + +
Sbjct: 64 HPNIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLL 116
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 117 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 169
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 21/228 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L + S + P K + +
Sbjct: 62 HPNIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLL 114
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 115 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 167
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 21/226 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHR 320
F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ L T + + +LV++++ + L + S + P K + + +G
Sbjct: 62 NIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQG 114
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFG 437
+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 115 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 167
Query: 438 YLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 21/228 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L + S + P K + +
Sbjct: 62 HPNIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLL 114
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 115 QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 167
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 21/228 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L + S + P K + +
Sbjct: 61 HPNIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLL 113
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 114 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 166
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 21/228 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L + S + P K + +
Sbjct: 65 HPNIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLL 117
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 118 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 170
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 218
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 272 IGQGASGIVYKGTLRHGN------LVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+G GA G VY+G + VAVK + ++ ++ DE DF E IISK H+N++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR----KQLTWPQRKKIIVDVAKG 380
G + S RF++ + M G L + + R L + D+A G
Sbjct: 125 CIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 179
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSE---LNAKVADFGLAKQSLEGHSHLTTRVAG-TF 436
YL HRDI + N LL AK+ DFG+A+ + A
Sbjct: 180 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 236
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++ PE + G T K+D +SFG+++ E+ S
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 21/226 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHR 320
F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ L T + + +LV++++ + L + S + P K + + +G
Sbjct: 62 NIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQG 114
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFG 437
+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 115 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 167
Query: 438 YLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
+ + + + LS I + +++++ ++ + GI +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLVGIKHLH 143
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 446 YGQLTEKSDVYSFGIVILELMSG 468
E D++S G+++ E++ G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
+ + + + LS I + +++++ ++ + GI +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLVGIKHLH 143
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 446 YGQLTEKSDVYSFGIVILELMSG 468
E D++S G+++ E++ G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 37/246 (15%)
Query: 243 ASVLPN--SGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH------GNLVAVK 294
ASV P S A + E E A + + +GQG+ G+VY+G + VA+K
Sbjct: 2 ASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 61
Query: 295 QILDLDTKGDE-DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLS 353
+ + + + +F NE ++ + +++ L G S G+ ++ + M G L
Sbjct: 62 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLK 116
Query: 354 DNISISHKRKQ----LTWPQRKKIIV---DVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+ + L P K+I ++A G+AYL+ HRD+ + N ++
Sbjct: 117 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 173
Query: 407 ELNAKVADFGLAKQSLE-------GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFG 459
+ K+ DFG+ + E G L R +++PE G T SDV+SFG
Sbjct: 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFG 227
Query: 460 IVILEL 465
+V+ E+
Sbjct: 228 VVLWEI 233
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 21/226 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHR 320
F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ L T + + +LV++++ + L + S + P K + + +G
Sbjct: 64 NIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQG 116
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFG 437
+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 117 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 169
Query: 438 YLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 35/238 (14%)
Query: 249 SGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH------GNLVAVKQILDLDTK 302
S A F E E A + + +GQG+ G+VY+G + VA+K + + +
Sbjct: 1 SAADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 60
Query: 303 GDE-DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK 361
+ +F NE ++ + +++ L G S G+ ++ + M G L +
Sbjct: 61 RERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRP 115
Query: 362 RKQ----LTWPQRKKIIV---DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVAD 414
+ L P K+I ++A G+AYL+ HRD+ + N ++ + K+ D
Sbjct: 116 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 172
Query: 415 FGLAKQSLE-------GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILEL 465
FG+ + E G L R +++PE G T SDV+SFG+V+ E+
Sbjct: 173 FGMTRDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 37/248 (14%)
Query: 241 LQASVLPN--SGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH------GNLVA 292
L ASV P S A + E E A + + +GQG+ G+VY+G + VA
Sbjct: 22 LYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVA 81
Query: 293 VKQILDLDTKGDE-DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGT 351
+K + + + + +F NE ++ + +++ L G S G+ ++ + M G
Sbjct: 82 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGD 136
Query: 352 LSDNISISHKRKQ----LTWPQRKKIIV---DVAKGIAYLHYGLKPGIYHRDIKSTNILL 404
L + + L P K+I ++A G+AYL+ HRD+ + N ++
Sbjct: 137 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 193
Query: 405 DSELNAKVADFGLAKQSLE-------GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYS 457
+ K+ DFG+ + E G L R +++PE G T SDV+S
Sbjct: 194 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWS 247
Query: 458 FGIVILEL 465
FG+V+ E+
Sbjct: 248 FGVVLWEI 255
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHR 320
F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ L T + + +LV++++ + L + S + P K + + +G
Sbjct: 63 NIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQG 115
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFG 437
+++ H + HRD+K N+L+++E K+ADFGLA+ + ++H T
Sbjct: 116 LSFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLW 168
Query: 438 YLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 266 FSQNNLIGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
+ ++IG+G S +V + R G+ AVK ++ + ++E + + R
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKI---MEVTAERLSPEQLEEVREATRRETHI 152
Query: 325 LRGCC-----VTSDDS--SGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
LR +T DS S FLV+D M G L D ++ ++ L+ + + I+ +
Sbjct: 153 LRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLT---EKVALSEKETRSIMRSL 209
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
+ +++LH I HRD+K NILLD + +++DFG + G + GT G
Sbjct: 210 LEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPG 264
Query: 438 YLAPE---------YALYGQLTEKSDVYSFGIVILELMSG 468
YLAPE + YG+ + D+++ G+++ L++G
Sbjct: 265 YLAPEILKCSMDETHPGYGK---EVDLWACGVILFTLLAG 301
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 18/214 (8%)
Query: 272 IGQGASGIVYKGTLRHGNL---VAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLLSLRG 327
+G G G V +G R VA+K + K D E+ E +I+ ++ + ++ L G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 328 CCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYG 387
C + LV + G L + + KR+++ +++ V+ G+ YL
Sbjct: 404 VC------QAEALMLVMEMAGGGPL--HKFLVGKREEIPVSNVAELLHQVSMGMKYLE-- 453
Query: 388 LKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYAL 445
+ HR++ + N+LL + AK++DFGL+K S+ T R AG + + APE
Sbjct: 454 -EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 512
Query: 446 YGQLTEKSDVYSFGIVILELMS-GRKVLDTSTSP 478
+ + + +SDV+S+G+ + E +S G+K P
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP 546
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 110/239 (46%), Gaps = 28/239 (11%)
Query: 237 FVSNLQASVLPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVY--KGTLRH-GNLVAV 293
F +LQA+ +K H+SE+ Q +G GA G V + + H + +
Sbjct: 16 FQGDLQATPGMFITSKKGHLSEMYQRVKK------LGSGAYGEVLLCRDKVTHVERAIKI 69
Query: 294 KQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRF-LVYDYMPNGTL 352
+ + T + EV ++ + H N++ L D KR + LV + G L
Sbjct: 70 IRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL------YDFFEDKRNYYLVMECYKGGEL 123
Query: 353 SDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS-ELNA- 410
D I R + II V G+ YLH K I HRD+K N+LL+S E +A
Sbjct: 124 FDEII---HRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDAL 177
Query: 411 -KVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
K+ DFGL+ E + R+ GT Y+APE L + EK DV+S G+++ L++G
Sbjct: 178 IKIVDFGLS-AVFENQKKMKERL-GTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFT--NEVEIISKIRHRNLL 323
F++ IG+G+ G V+KG V +I+DL+ DE E+ ++S+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
G + + +++ +Y+ G+ D + L Q I+ ++ KG+ Y
Sbjct: 84 KYYGSYLKD-----TKLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDY 134
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEY 443
LH K HRDIK+ N+LL K+ADFG+A Q + V F ++APE
Sbjct: 135 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEV 190
Query: 444 ALYGQLTEKSDVYSFGIVILELMSGR 469
K+D++S GI +EL G
Sbjct: 191 IKQSAYDSKADIWSLGITAIELARGE 216
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 21/227 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIR 318
+ F + IG+G G+VYK + G +VA+K+I LD +T+G E+ ++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 319 HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
H N++ L T + + +LV++++ + L + S + P K + +
Sbjct: 64 HPNIVKLLDVIHTEN-----KLYLVFEHV-DQDLKKFMDAS-ALTGIPLPLIKSYLFQLL 116
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGT 435
+G+A+ H + HRD+K N+L+++E K+ADFGLA+ + + H T
Sbjct: 117 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----T 169
Query: 436 FGYLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQL 481
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 216
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 52/302 (17%)
Query: 272 IGQGASGIVYKGTLRH------GNLVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+GQG+ G+VY+G R VAVK + + + + +F NE ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNI-------SISHKRKQLTWPQRKKIIVDV 377
L G S G+ +V + M +G L + + R T + ++ ++
Sbjct: 85 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE-------GHSHLTT 430
A G+AYL+ HRD+ + N ++ + K+ DFG+ + E G L
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV 196
Query: 431 RVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ-LITDWAWVL 489
R ++APE G T SD++SFG+V+ E+ S + P+Q L +
Sbjct: 197 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKF 244
Query: 490 AKSGKVDDIFDEFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLEGDIDIPKL 549
G D D ER + +C +RPT + + +L+ D+ P
Sbjct: 245 VMDGGYLDQPDN---------CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH-PSF 294
Query: 550 PD 551
P+
Sbjct: 295 PE 296
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFT--NEVEIISKIRHRNLL 323
F++ IG+G+ G V+KG V +I+DL+ DE E+ ++S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
G + + +++ +Y+ G+ D + L Q I+ ++ KG+ Y
Sbjct: 69 KYYGSYLKDT-----KLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDY 119
Query: 384 LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEY 443
LH K HRDIK+ N+LL K+ADFG+A Q + V F ++APE
Sbjct: 120 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEV 175
Query: 444 ALYGQLTEKSDVYSFGIVILELMSGR 469
K+D++S GI +EL G
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGE 201
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 52/302 (17%)
Query: 272 IGQGASGIVYKGTLRH------GNLVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+GQG+ G+VY+G R VAVK + + + + +F NE ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNI-------SISHKRKQLTWPQRKKIIVDV 377
L G S G+ +V + M +G L + + R T + ++ ++
Sbjct: 85 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE-------GHSHLTT 430
A G+AYL+ HRD+ + N ++ + K+ DFG+ + E G L
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 431 RVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ-LITDWAWVL 489
R ++APE G T SD++SFG+V+ E+ S + P+Q L +
Sbjct: 197 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKF 244
Query: 490 AKSGKVDDIFDEFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLEGDIDIPKL 549
G D D ER + +C +RPT + + +L+ D+ P
Sbjct: 245 VMDGGYLDQPDN---------CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH-PSF 294
Query: 550 PD 551
P+
Sbjct: 295 PE 296
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 52/302 (17%)
Query: 272 IGQGASGIVYKGTLRH------GNLVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+GQG+ G+VY+G R VAVK + + + + +F NE ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNG-------TLSDNISISHKRKQLTWPQRKKIIVDV 377
L G S G+ +V + M +G +L + R T + ++ ++
Sbjct: 85 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE-------GHSHLTT 430
A G+AYL+ HRD+ + N ++ + K+ DFG+ + E G L
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 431 RVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ-LITDWAWVL 489
R ++APE G T SD++SFG+V+ E+ S + P+Q L +
Sbjct: 197 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKF 244
Query: 490 AKSGKVDDIFDEFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLEGDIDIPKL 549
G D D ER + +C +RPT + + +L+ D+ P
Sbjct: 245 VMDGGYLDQPDN---------CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH-PSF 294
Query: 550 PD 551
P+
Sbjct: 295 PE 296
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 37/246 (15%)
Query: 243 ASVLPN--SGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH------GNLVAVK 294
ASV P S A + E E A + + +GQG+ G+VY+G + VA+K
Sbjct: 2 ASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 61
Query: 295 QILDLDTKGDE-DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLS 353
+ + + + +F NE ++ + +++ L G S G+ ++ + M G L
Sbjct: 62 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLK 116
Query: 354 DNIS----ISHKRKQLTWPQRKKIIV---DVAKGIAYLHYGLKPGIYHRDIKSTNILLDS 406
+ L P K+I ++A G+AYL+ HRD+ + N ++
Sbjct: 117 SYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 173
Query: 407 ELNAKVADFGLAKQSLE-------GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFG 459
+ K+ DFG+ + E G L R +++PE G T SDV+SFG
Sbjct: 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFG 227
Query: 460 IVILEL 465
+V+ E+
Sbjct: 228 VVLWEI 233
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + IG G+ G ++ + GN A+K ILD + K E
Sbjct: 29 KWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 87
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +YMP G + SH R+ +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYMPGGDM-----FSHLRRIGR 137
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+L+D + KVADFG AK+ ++G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-VKG 193
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 356 ISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADF 415
+ + +RK +T P+ + + +G+ YLH + HRD+K N+ L+ +++ K+ DF
Sbjct: 130 LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDF 186
Query: 416 GLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTS 475
GLA + +E + GT Y+APE + + D++S G ++ L+ G+ +TS
Sbjct: 187 GLATK-IEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + IG G+ G ++ + GN A+K ILD + K E
Sbjct: 29 KWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 87
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +YMP G + SH R+ +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYMPGGDM-----FSHLRRIGR 137
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+L+D + KVADFG AK+ ++G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-VKG 193
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 52/302 (17%)
Query: 272 IGQGASGIVYKGTLRH------GNLVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+GQG+ G+VY+G R VAVK + + + + +F NE ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNG-------TLSDNISISHKRKQLTWPQRKKIIVDV 377
L G S G+ +V + M +G +L + R T + ++ ++
Sbjct: 85 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE-------GHSHLTT 430
A G+AYL+ HRD+ + N ++ + K+ DFG+ + E G L
Sbjct: 140 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 431 RVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ-LITDWAWVL 489
R ++APE G T SD++SFG+V+ E+ S + P+Q L +
Sbjct: 197 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKF 244
Query: 490 AKSGKVDDIFDEFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLEGDIDIPKL 549
G D D ER + +C +RPT + + +L+ D+ P
Sbjct: 245 VMDGGYLDQPDN---------CPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH-PSF 294
Query: 550 PD 551
P+
Sbjct: 295 PE 296
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 35/227 (15%)
Query: 266 FSQNNLIGQGASGIVYKG-TLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
F + ++GQGA G V K A+K+I + K +EV +++ + H+ ++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST-ILSEVXLLASLNHQYVVR 66
Query: 325 LRGCCVTSDD-----SSGKRR---FLVYDYMPNGTLSDNI---SISHKRKQLTWPQRKKI 373
+ + ++ K++ F+ +Y N TL D I +++ +R + W ++
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY-W----RL 121
Query: 374 IVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-------------Q 420
+ + ++Y+H GI HR++K NI +D N K+ DFGLAK Q
Sbjct: 122 FRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELM 466
+L G S T GT Y+A E G EK D YS GI+ E +
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 35/238 (14%)
Query: 249 SGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH------GNLVAVKQILDLDTK 302
S A + E E A + + +GQG+ G+VY+G + VA+K + + +
Sbjct: 4 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 63
Query: 303 GDE-DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK 361
+ +F NE ++ + +++ L G S G+ ++ + M G L +
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRP 118
Query: 362 RKQ----LTWPQRKKIIV---DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVAD 414
+ L P K+I ++A G+AYL+ HRD+ + N ++ + K+ D
Sbjct: 119 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 175
Query: 415 FGLAKQSLE-------GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILEL 465
FG+ + E G L R +++PE G T SDV+SFG+V+ E+
Sbjct: 176 FGMTRDIXETDXXRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 52/302 (17%)
Query: 272 IGQGASGIVYKGTLRH------GNLVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+GQG+ G+VY+G R VAVK + + + + +F NE ++ +++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNG-------TLSDNISISHKRKQLTWPQRKKIIVDV 377
L G S G+ +V + M +G +L + R T + ++ ++
Sbjct: 82 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE-------GHSHLTT 430
A G+AYL+ HRD+ + N ++ + K+ DFG+ + E G L
Sbjct: 137 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 193
Query: 431 RVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ-LITDWAWVL 489
R ++APE G T SD++SFG+V+ E+ S + P+Q L +
Sbjct: 194 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKF 241
Query: 490 AKSGKVDDIFDEFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLEGDIDIPKL 549
G D D ER + +C +RPT + + +L+ D+ P
Sbjct: 242 VMDGGYLDQPDN---------CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH-PSF 291
Query: 550 PD 551
P+
Sbjct: 292 PE 293
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 356 ISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADF 415
+ + +RK +T P+ + + +G+ YLH + HRD+K N+ L+ +++ K+ DF
Sbjct: 130 LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDF 186
Query: 416 GLA-KQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDT 474
GLA K +G T + GT Y+APE + + D++S G ++ L+ G+ +T
Sbjct: 187 GLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244
Query: 475 S 475
S
Sbjct: 245 S 245
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 35/215 (16%)
Query: 272 IGQGASGIVYKGTLR-HGNLVAVKQILD-LDTKGDEDFTNEVEIISK-------IRHRNL 322
IG+GA G V K + G ++AVK+I +D K + +++++ + ++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 323 LSLRGCCVTSDD--SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQR--KKIIVDVA 378
L G C + S+ +F Y Y L D I P+ KI +
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVY---SVLDDVI-----------PEEILGKITLATV 135
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
K + +L LK I HRDIK +NILLD N K+ DFG++ Q ++ S TR AG Y
Sbjct: 136 KALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVD--SIAKTRDAGCRPY 191
Query: 439 LAPEY----ALYGQLTEKSDVYSFGIVILELMSGR 469
+APE A +SDV+S GI + EL +GR
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 356 ISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADF 415
+ + +RK +T P+ + + +G+ YLH + HRD+K N+ L+ +++ K+ DF
Sbjct: 114 LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDF 170
Query: 416 GLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTS 475
GLA + +E + GT Y+APE + + D++S G ++ L+ G+ +TS
Sbjct: 171 GLATK-IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 110/226 (48%), Gaps = 21/226 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHR 320
F + IG+G G+VYK + G +VA+ +I LD +T+G E+ ++ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ L T + + +LV++++ + L + S + P K + + +G
Sbjct: 63 NIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQG 115
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFG 437
+A+ H + HRD+K N+L+++E K+ADFGLA+ + ++H T
Sbjct: 116 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLW 168
Query: 438 YLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 110/226 (48%), Gaps = 21/226 (9%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHR 320
F + IG+G G+VYK + G +VA+ +I LD +T+G E+ ++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++ L T + + +LV++++ + L + S + P K + + +G
Sbjct: 62 NIVKLLDVIHTEN-----KLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQG 114
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ---SLEGHSHLTTRVAGTFG 437
+A+ H + HRD+K N+L+++E K+ADFGLA+ + ++H T
Sbjct: 115 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV----TLW 167
Query: 438 YLAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQLI 482
Y APE L + + D++S G + E+++ R + + QL
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 52/302 (17%)
Query: 272 IGQGASGIVYKGTLRH------GNLVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+GQG+ G+VY+G R VAVK + + + + +F NE ++ +++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNI-------SISHKRKQLTWPQRKKIIVDV 377
L G S G+ +V + M +G L + + R T + ++ ++
Sbjct: 84 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE-------GHSHLTT 430
A G+AYL+ HRD+ + N ++ + K+ DFG+ + E G L
Sbjct: 139 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 431 RVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ-LITDWAWVL 489
R ++APE G T SD++SFG+V+ E+ S + P+Q L +
Sbjct: 196 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKF 243
Query: 490 AKSGKVDDIFDEFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLEGDIDIPKL 549
G D D ER + +C +RPT + + +L+ D+ P
Sbjct: 244 VMDGGYLDQPDN---------CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH-PSF 293
Query: 550 PD 551
P+
Sbjct: 294 PE 295
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 111/251 (44%), Gaps = 24/251 (9%)
Query: 228 RKQIALHEQFVSNLQASVLPNSGAKWFHVS----ELEQATNGFSQNNLIGQGASGIVY-- 281
+KQ A F S S NSGA+ VS + N F L+G+G G V
Sbjct: 111 KKQAAAEMDFRS---GSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILV 167
Query: 282 --KGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKR 339
K T R+ + +K+ + + E ++ RH L +L+ T D R
Sbjct: 168 KEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD-----R 222
Query: 340 RFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII-VDVAKGIAYLHYGLKPGIYHRDIK 398
V +Y G L ++S R+++ R + ++ + YLH + + +RD+K
Sbjct: 223 LCFVMEYANGGELFFHLS----RERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLK 276
Query: 399 STNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSF 458
N++LD + + K+ DFGL K+ ++ + + T GT YLAPE D +
Sbjct: 277 LENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGL 335
Query: 459 GIVILELMSGR 469
G+V+ E+M GR
Sbjct: 336 GVVMYEMMCGR 346
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 35/238 (14%)
Query: 249 SGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH------GNLVAVKQILDLDTK 302
S A + E E A + + +GQG+ G+VY+G + VA+K + + +
Sbjct: 3 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 62
Query: 303 GDE-DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK 361
+ +F NE ++ + +++ L G S G+ ++ + M G L +
Sbjct: 63 RERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRP 117
Query: 362 RKQ----LTWPQRKKIIV---DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVAD 414
+ L P K+I ++A G+AYL+ HRD+ + N ++ + K+ D
Sbjct: 118 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 174
Query: 415 FGLAKQSLE-------GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILEL 465
FG+ + E G L R +++PE G T SDV+SFG+V+ E+
Sbjct: 175 FGMTRDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 106/239 (44%), Gaps = 22/239 (9%)
Query: 256 VSELEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD----------- 304
++EL + ++ I G+ G V G G VA+K++ + + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
+ E+ +++ H N+L LR V ++ + + +LV + M +D + H ++
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR----TDLAQVIHDQRI 129
Query: 365 LTWPQR-KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE 423
+ PQ + + + G+ LH + G+ HRD+ NILL + + DF LA++
Sbjct: 130 VISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 424 GHSHLTTRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
+ T Y APE + + T+ D++S G V+ E+ + + + ST QL
Sbjct: 187 DAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 356 ISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADF 415
+ + +RK +T P+ + + +G+ YLH + HRD+K N+ L+ +++ K+ DF
Sbjct: 130 LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDF 186
Query: 416 GLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTS 475
GLA + +E + GT Y+APE + + D++S G ++ L+ G+ +TS
Sbjct: 187 GLATK-IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 261 QATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKI-RH 319
Q T+G+ IG G+ + + + N +I+D K D T E+EI+ + +H
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIID---KSKRDPTEEIEILLRYGQH 75
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
N+++L+ DD GK ++V + G L D I ++K + + ++ + K
Sbjct: 76 PNIITLKDVY---DD--GKYVYVVTELXKGGELLDKIL---RQKFFSEREASAVLFTITK 127
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSE----LNAKVADFGLAKQSLEGHSHLTTRVAGT 435
+ YLH G+ HRD+K +NIL E + ++ DFG AKQ L + L T
Sbjct: 128 TVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAENGLLXTPCYT 183
Query: 436 FGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
++APE D++S G+++ ++G
Sbjct: 184 ANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 326 RGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ +LV + M + L I + +++++ ++ + GI +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHL 142
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVI 197
Query: 445 LYGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
L E D++S G ++ E L GR +D
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 106/239 (44%), Gaps = 22/239 (9%)
Query: 256 VSELEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD----------- 304
++EL + ++ I G+ G V G G VA+K++ + + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
+ E+ +++ H N+L LR V ++ + + +LV + M +D + H ++
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR----TDLAQVIHDQRI 129
Query: 365 LTWPQR-KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE 423
+ PQ + + + G+ LH + G+ HRD+ NILL + + DF LA++
Sbjct: 130 VISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 424 GHSHLTTRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
+ T Y APE + + T+ D++S G V+ E+ + + + ST QL
Sbjct: 187 DAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 263 TNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTN---EVEIISKIRH 319
++ + +G+GA +V + + L +I++ DF E I K++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 320 RNLLSLRGCCVTSDDSSGKRRF--LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
N++ L DS + F LV+D + G L ++I R+ + I +
Sbjct: 65 PNIVRLH-------DSIQEESFHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQQI 114
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNA---KVADFGLAKQSLEGHSHLTTRVAG 434
+ IAY H GI HR++K N+LL S+ K+ADFGLA + S AG
Sbjct: 115 LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV--NDSEAWHGFAG 169
Query: 435 TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T GYL+PE ++ D+++ G+++ L+ G
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 35/238 (14%)
Query: 249 SGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH------GNLVAVKQILDLDTK 302
S A + E E A + + +GQG+ G+VY+G + VA+K + + +
Sbjct: 3 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 62
Query: 303 GDE-DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK 361
+ +F NE ++ + +++ L G S G+ ++ + M G L +
Sbjct: 63 RERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRP 117
Query: 362 RKQ----LTWPQRKKIIV---DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVAD 414
+ L P K+I ++A G+AYL+ HRD+ + N ++ + K+ D
Sbjct: 118 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 174
Query: 415 FGLAKQSLE-------GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILEL 465
FG+ + E G L R +++PE G T SDV+SFG+V+ E+
Sbjct: 175 FGMTRDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 35/238 (14%)
Query: 249 SGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH------GNLVAVKQILDLDTK 302
S A + E E A + + +GQG+ G+VY+G + VA+K + + +
Sbjct: 4 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM 63
Query: 303 GDE-DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK 361
+ +F NE ++ + +++ L G S G+ ++ + M G L +
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRP 118
Query: 362 RKQ----LTWPQRKKIIV---DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVAD 414
+ L P K+I ++A G+AYL+ HRD+ + N ++ + K+ D
Sbjct: 119 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 175
Query: 415 FGLAKQSLE-------GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILEL 465
FG+ + E G L R +++PE G T SDV+SFG+V+ E+
Sbjct: 176 FGMTRDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 261 QATNGFSQNNLIGQGASG--IVYKGTLRHGNLVAVKQI--LDLDTKGDEDFTNEVEIISK 316
Q+ + + IG+G+ G I+ K T G +K+I + +K E+ EV +++
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKST-EDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNIS-----ISHKRKQLTWPQRK 371
++H N++ R S + +G ++V DY G L I+ + + + L W
Sbjct: 80 MKHPNIVQYR----ESFEENGSL-YIVMDYCEGGDLFKRINAQKGVLFQEDQILDW---- 130
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
V + + ++H I HRDIKS NI L + ++ DFG+A+ L L
Sbjct: 131 --FVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIAR-VLNSTVELARA 184
Query: 432 VAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTST 476
GT YL+PE KSD+++ G V+ EL + + + +
Sbjct: 185 CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
+ + + + LS I + +++++ ++ + GI +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLVGIKHLH 143
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 446 YGQLTEKSDVYSFGIVILELMSG 468
E D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 263 TNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTN---EVEIISKIRH 319
++ + +G+GA +V + + L +I++ DF E I K++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 320 RNLLSLRGCCVTSDDSSGKRRF--LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
N++ L DS + F LV+D + G L ++I R+ + I +
Sbjct: 64 PNIVRLH-------DSIQEESFHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQQI 113
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNA---KVADFGLAKQSLEGHSHLTTRVAG 434
+ IAY H GI HR++K N+LL S+ K+ADFGLA + S AG
Sbjct: 114 LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV--NDSEAWHGFAG 168
Query: 435 TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T GYL+PE ++ D+++ G+++ L+ G
Sbjct: 169 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 264 NGFSQNNLIGQGASGIVY----KGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
N F L+G+G G V K T R+ + +++ + + E ++ RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII-VDVA 378
L +L+ T D R V +Y G L ++S R+++ +R + ++
Sbjct: 68 PFLTALKYAFQTHD-----RLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIV 118
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
+ YLH + +RDIK N++LD + + K+ DFGL K+ + + + T GT Y
Sbjct: 119 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEY 174
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
LAPE D + G+V+ E+M GR
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 264 NGFSQNNLIGQGASGIVY----KGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
N F L+G+G G V K T R+ + +++ + + E ++ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII-VDVA 378
L +L+ T D R V +Y G L ++S R+++ +R + ++
Sbjct: 65 PFLTALKYAFQTHD-----RLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIV 115
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
+ YLH + +RDIK N++LD + + K+ DFGL K+ + + + T GT Y
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEY 171
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
LAPE D + G+V+ E+M GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 264 NGFSQNNLIGQGASGIVY----KGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
N F L+G+G G V K T R+ + +++ + + E ++ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII-VDVA 378
L +L+ T D R V +Y G L ++S R+++ +R + ++
Sbjct: 65 PFLTALKYAFQTHD-----RLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIV 115
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
+ YLH + +RDIK N++LD + + K+ DFGL K+ + + + T GT Y
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEY 171
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
LAPE D + G+V+ E+M GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 263 TNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTN---EVEIISKIRH 319
++ + +G+GA +V + + L +I++ DF E I K++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 320 RNLLSLRGCCVTSDDSSGKRRF--LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
N++ L DS + F LV+D + G L ++I R+ + I +
Sbjct: 65 PNIVRLH-------DSIQEESFHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQQI 114
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNA---KVADFGLAKQSLEGHSHLTTRVAG 434
+ IAY H GI HR++K N+LL S+ K+ADFGLA + S AG
Sbjct: 115 LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV--NDSEAWHGFAG 169
Query: 435 TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T GYL+PE ++ D+++ G+++ L+ G
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 41/231 (17%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDF----TNEVEIISK 316
AT+ + IG GA G VYK H G+ VA+K + G+E EV ++ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV--PNGEEGLPISTVREVALLRR 59
Query: 317 IR---HRNLLSLRGCCVTSDDSSGKRRFLVYDYM------------PNGTLSDNISISHK 361
+ H N++ L C TS + LV++++ P G ++ I
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI----- 114
Query: 362 RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS 421
K ++ +G+ +LH I HRD+K NIL+ S K+ADFGLA+
Sbjct: 115 ---------KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-- 160
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVL 472
+ + V T Y APE L D++S G + E+ + +
Sbjct: 161 IYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 286 RH---GNLVAVKQI--LDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRR 340
RH G VAVK I L++ + EV I+ + H N++ L T K
Sbjct: 27 RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE-----KTL 81
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKST 400
+LV +Y G + D + ++H W + K+ + ++ + Y + I HRD+K+
Sbjct: 82 YLVMEYASGGEVFDYL-VAH-----GWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAE 135
Query: 401 NILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE--KSDVYSF 458
N+LLD+++N K+ADFG + + G+ T G+ Y APE G+ + + DV+S
Sbjct: 136 NLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPE-LFQGKKYDGPEVDVWSL 192
Query: 459 GIVILELMSG 468
G+++ L+SG
Sbjct: 193 GVILYTLVSG 202
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH-GNLVA---VKQILDLDTKGDEDF 307
KW + + F ++G+G G V+ ++ G L A + + KG +
Sbjct: 175 KWLEAQPM--GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA 232
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNI-SISHKRKQLT 366
E +I++K+ R ++SL T D LV M G + +I ++
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLC-----LVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 367 WPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHS 426
P+ + G+ +LH + I +RD+K N+LLD + N +++D GLA + G +
Sbjct: 288 EPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 427 HLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
T AGT G++APE L + D ++ G+ + E+++ R
Sbjct: 345 K-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQIL---DLDTKG-DEDFTNEVEIISKIRH 319
+ F +G+G G VY + + + ++L ++ +G + E+EI + + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKK--IIVDV 377
N+L L +R +L+ +Y P G L + +K T+ +++ I+ ++
Sbjct: 83 PNILRLYNYFYDR-----RRIYLILEYAPRGELYKEL-----QKSCTFDEQRTATIMEEL 132
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
A + Y H G K + HRDIK N+LL + K+ADFG S+ S + GT
Sbjct: 133 ADALMYCH-GKK--VIHRDIKPENLLLGLKGELKIADFGW---SVHAPSLRRKTMCGTLD 186
Query: 438 YLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTST 476
YL PE EK D++ G++ EL+ G ++++
Sbjct: 187 YLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESAS 225
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 258 ELEQATNGFSQNNLIGQGASGIVYKGTLRH------GNLVAVKQILDLDTKGDE-DFTNE 310
E E A + + +GQG+ G+VY+G + VA+K + + + + +F NE
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 311 VEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ----LT 366
++ + +++ L G S G+ ++ + M G L + + L
Sbjct: 64 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 367 WPQRKKIIV---DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE 423
P K+I ++A G+AYL+ HRD+ + N ++ + K+ DFG+ + E
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
Query: 424 -------GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILEL 465
G L R +++PE G T SDV+SFG+V+ E+
Sbjct: 176 TDXXRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
+ + + + LS I + +++++ ++ + GI +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 446 YGQLTEKSDVYSFGIVILELMSG 468
E D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 36/222 (16%)
Query: 272 IGQGASGIVY--------KGTLRHGNLVAVKQILDLDTKGD-EDFTNEVEIISKI-RHRN 321
+G+GA G V K + VAVK + D T+ D D +E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-------------RKQLTWP 368
+++L G C T D +++ +Y G L + + +Q+T+
Sbjct: 103 IINLLGAC-TQDGPL----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 369 QRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK--QSLEGHS 426
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ +++ +
Sbjct: 158 DLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 427 HLTTRVAGTFGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 467
+ TT ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 215 N-TTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 258 ELEQATNGFSQNNLIGQGASGIVYKGTLRH------GNLVAVKQILDLDTKGDE-DFTNE 310
E E A + + +GQG+ G+VY+G + VA+K + + + + +F NE
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 311 VEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ----LT 366
++ + +++ L G S G+ ++ + M G L + + L
Sbjct: 66 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 367 WPQRKKIIV---DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE 423
P K+I ++A G+AYL+ HRD+ + N ++ + K+ DFG+ + E
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 177
Query: 424 -------GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILEL 465
G L R +++PE G T SDV+SFG+V+ E+
Sbjct: 178 TDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 110/226 (48%), Gaps = 16/226 (7%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRH-GNLVAVKQI-LDLDTKGDEDFTNEVEIISKIRH 319
+++ F Q +G G VYKG + G VA+K++ LD + E+ ++ +++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNG--TLSDNISISHKRKQLTWPQRKKIIVDV 377
N++ L T + + LV+++M N D+ ++ + + L K +
Sbjct: 63 ENIVRLYDVIHTENKLT-----LVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG 437
+G+A+ H + I HRD+K N+L++ K+ DFGLA+ + ++ V T
Sbjct: 118 LQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLW 173
Query: 438 YLAPEYALYGQLTEKS--DVYSFGIVILELMSGRKVLDTSTSPFQL 481
Y AP+ L G T + D++S G ++ E+++G+ + + QL
Sbjct: 174 YRAPD-VLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL 218
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 21/231 (9%)
Query: 248 NSGAKWFHVS----ELEQATNGFSQNNLIGQGASGIVY----KGTLRHGNLVAVKQILDL 299
NSGA+ VS + N F L+G+G G V K T R+ + +K+ + +
Sbjct: 131 NSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV 190
Query: 300 DTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISIS 359
E ++ RH L +L+ T D R V +Y G L ++S
Sbjct: 191 AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD-----RLCFVMEYANGGELFFHLS-- 243
Query: 360 HKRKQLTWPQRKKII-VDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLA 418
R+++ R + ++ + YLH + + +RD+K N++LD + + K+ DFGL
Sbjct: 244 --RERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLC 299
Query: 419 KQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
K+ ++ + + T GT YLAPE D + G+V+ E+M GR
Sbjct: 300 KEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDF----TNEVEIISK 316
AT+ + IG GA G VYK H G+ VA+K + G+E EV ++ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV--PNGEEGLPISTVREVALLRR 59
Query: 317 IR---HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQR--K 371
+ H N++ L C TS + LV++++ D + K P K
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ----DLRTYLDKAPPPGLPAETIK 115
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
++ +G+ +LH I HRD+K NIL+ S K+ADFGLA+ + +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR--IYSYQMALDP 170
Query: 432 VAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVL 472
V T Y APE L D++S G + E+ + +
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 34/221 (15%)
Query: 272 IGQGASGIVY--------KGTLRHGNLVAVKQILDLDTKGD-EDFTNEVEIISKI-RHRN 321
+G+GA G V K + VAVK + D T+ D D +E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-------------RKQLTWP 368
+++L G C T D +++ +Y G L + + +Q+T+
Sbjct: 103 IITLLGAC-TQDGPL----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 369 QRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSH 427
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 428 LTTRVAGTFGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 467
TT ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 215 KTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH-GNLVA---VKQILDLDTKGDEDF 307
KW + + F ++G+G G V+ ++ G L A + + KG +
Sbjct: 175 KWLEAQPM--GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA 232
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNI-SISHKRKQLT 366
E +I++K+ R ++SL T D LV M G + +I ++
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLC-----LVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 367 WPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHS 426
P+ + G+ +LH + I +RD+K N+LLD + N +++D GLA + G +
Sbjct: 288 EPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 427 HLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
T AGT G++APE L + D ++ G+ + E+++ R
Sbjct: 345 K-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH-GNLVA---VKQILDLDTKGDEDF 307
KW + + F ++G+G G V+ ++ G L A + + KG +
Sbjct: 175 KWLEAQPM--GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA 232
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNI-SISHKRKQLT 366
E +I++K+ R ++SL T D LV M G + +I ++
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLC-----LVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 367 WPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHS 426
P+ + G+ +LH + I +RD+K N+LLD + N +++D GLA + G +
Sbjct: 288 EPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 427 HLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
T AGT G++APE L + D ++ G+ + E+++ R
Sbjct: 345 K-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++SL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 81
Query: 326 RGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ +LV + M + L I + +++++ ++ + GI +L
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHL 135
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE
Sbjct: 136 HSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVI 190
Query: 445 LYGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
L E D++S G ++ E L GR +D
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
+ + + + LS I + +++++ ++ + GI +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 446 YGQLTEKSDVYSFGIVILELMSG 468
E D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
+ + + + LS I + +++++ ++ + GI +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 446 YGQLTEKSDVYSFGIVILELMSG 468
E D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDF----TNEVEIISK 316
AT+ + IG GA G VYK H G+ VA+K + G+E EV ++ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV--PNGEEGLPISTVREVALLRR 59
Query: 317 IR---HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQR--K 371
+ H N++ L C TS + LV++++ D + K P K
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ----DLRTYLDKAPPPGLPAETIK 115
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
++ +G+ +LH I HRD+K NIL+ S K+ADFGLA+ + +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR--IYSYQMALFP 170
Query: 432 VAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVL 472
V T Y APE L D++S G + E+ + +
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 262 ATNGFSQN----NLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTN---EVEII 314
A+ FS N +G+GA +V + + L +I++ DF E I
Sbjct: 23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 82
Query: 315 SKIRHRNLLSLRGCCVTSDDSSGKRRF--LVYDYMPNGTLSDNISISHKRKQLTWPQRKK 372
K++H N++ L DS + F LV+D + G L ++I R+ +
Sbjct: 83 RKLQHPNIVRLH-------DSIQEESFHYLVFDLVTGGELFEDIVA---REFYSEADASH 132
Query: 373 IIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNA---KVADFGLAKQSLEGHSHLT 429
I + + IAY H GI HR++K N+LL S+ K+ADFGLA + S
Sbjct: 133 CIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV--NDSEAW 187
Query: 430 TRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
AGT GYL+PE ++ D+++ G+++ L+ G
Sbjct: 188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH-GNLVA---VKQILDLDTKGDEDF 307
KW + + F ++G+G G V+ ++ G L A + + KG +
Sbjct: 175 KWLEAQPM--GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA 232
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNI-SISHKRKQLT 366
E +I++K+ R ++SL T D LV M G + +I ++
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLC-----LVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 367 WPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHS 426
P+ + G+ +LH + I +RD+K N+LLD + N +++D GLA + G +
Sbjct: 288 EPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 427 HLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
T AGT G++APE L + D ++ G+ + E+++ R
Sbjct: 345 K-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 326 RGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ +LV + M + L I + +++++ ++ + GI +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHL 142
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVI 197
Query: 445 LYGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
L E D++S G ++ E L GR +D
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 24/211 (11%)
Query: 265 GFSQNNLIGQGASGIVYKGT-LRHGNLVAVK--QILDL-DTKGDEDFTNEVEIISKIRHR 320
F IG+G VY+ L G VA+K QI DL D K D E++++ ++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRK--KIIVDVA 378
N++ + ++ + +V + G LS I K+K+L P+R K V +
Sbjct: 93 NVIKYYASFIEDNELN-----IVLELADAGDLSRMIKHFKKQKRLI-PERTVWKYFVQLC 146
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK----QSLEGHSHLTTRVAG 434
+ ++H + HRDIK N+ + + K+ D GL + ++ HS + G
Sbjct: 147 SALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-----LVG 198
Query: 435 TFGYLAPEYALYGQLTEKSDVYSFGIVILEL 465
T Y++PE KSD++S G ++ E+
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 34/221 (15%)
Query: 272 IGQGASGIVY--------KGTLRHGNLVAVKQILDLDTKGD-EDFTNEVEIISKI-RHRN 321
+G+GA G V K + VAVK + D T+ D D +E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-------------RKQLTWP 368
+++L G C T D +++ +Y G L + + +Q+T+
Sbjct: 103 IINLLGAC-TQDGPL----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 369 QRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSH 427
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 428 LTTRVAGTFGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 467
TT ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 215 KTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 102/200 (51%), Gaps = 17/200 (8%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLLSLRGCCV 330
+G GA G VYK + +++A +++D ++ + ED+ E++I++ H N++ L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
++ +++ ++ G + D + + +R LT Q + + + YLH
Sbjct: 105 YENN-----LWILIEFCAGGAV-DAVMLELERP-LTESQIQVVCKQTLDALNYLHDN--- 154
Query: 391 GIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLT 450
I HRD+K+ NIL + + K+ADFG++ ++ + + GT ++APE +
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETSK 213
Query: 451 E-----KSDVYSFGIVILEL 465
+ K+DV+S GI ++E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ + +RH +++ L + D+ +V +Y N L D I +R +++ +
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEI-----IMVIEYAGN-ELFDYIV---QRDKMSEQE 108
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
++ + + Y H + I HRD+K N+LLD LN K+ADFGL+ +G+ T
Sbjct: 109 ARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT 165
Query: 430 TRVAGTFGYLAPEYALYGQLTE--KSDVYSFGIVILELMSGRKVLDTSTSP--FQLITDW 485
+ G+ Y APE + G+L + DV+S G+++ ++ R D + P F+ I++
Sbjct: 166 S--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG 222
Query: 486 AWVLAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL 521
+ L K + GA +++R ++V L
Sbjct: 223 VYTLPK-----------FLSPGAAGLIKRMLIVNPL 247
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 125/302 (41%), Gaps = 52/302 (17%)
Query: 272 IGQGASGIVYKGTLRH------GNLVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+GQG+ G+VY+G R VAVK + + + + +F NE ++ +++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNI-------SISHKRKQLTWPQRKKIIVDV 377
L G S G+ +V + M +G L + + R T + ++ ++
Sbjct: 86 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 140
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE-------GHSHLTT 430
A G+AYL+ HR++ + N ++ + K+ DFG+ + E G L
Sbjct: 141 ADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 431 RVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ-LITDWAWVL 489
R ++APE G T SD++SFG+V+ E+ S + P+Q L +
Sbjct: 198 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKF 245
Query: 490 AKSGKVDDIFDEFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLEGDIDIPKL 549
G D D ER + +C +RPT + + +L+ D+ P
Sbjct: 246 VMDGGYLDQPDN---------CPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH-PSF 295
Query: 550 PD 551
P+
Sbjct: 296 PE 297
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 125/302 (41%), Gaps = 52/302 (17%)
Query: 272 IGQGASGIVYKGTLRH------GNLVAVKQILDLDTKGDE-DFTNEVEIISKIRHRNLLS 324
+GQG+ G+VY+G R VAVK + + + + +F NE ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNI-------SISHKRKQLTWPQRKKIIVDV 377
L G S G+ +V + M +G L + + R T + ++ ++
Sbjct: 85 LLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE-------GHSHLTT 430
A G+AYL+ HR++ + N ++ + K+ DFG+ + E G L
Sbjct: 140 ADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 431 RVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQ-LITDWAWVL 489
R ++APE G T SD++SFG+V+ E+ S + P+Q L +
Sbjct: 197 R------WMAPESLKDGVFTTSSDMWSFGVVLWEITS------LAEQPYQGLSNEQVLKF 244
Query: 490 AKSGKVDDIFDEFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLEGDIDIPKL 549
G D D ER + +C +RPT + + +L+ D+ P
Sbjct: 245 VMDGGYLDQPDN---------CPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH-PSF 294
Query: 550 PD 551
P+
Sbjct: 295 PE 296
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 102/200 (51%), Gaps = 17/200 (8%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLLSLRGCCV 330
+G GA G VYK + +++A +++D ++ + ED+ E++I++ H N++ L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
++ +++ ++ G + D + + +R LT Q + + + YLH
Sbjct: 105 YENN-----LWILIEFCAGGAV-DAVMLELERP-LTESQIQVVCKQTLDALNYLHDN--- 154
Query: 391 GIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLT 450
I HRD+K+ NIL + + K+ADFG++ ++ + + GT ++APE +
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMCETSK 213
Query: 451 E-----KSDVYSFGIVILEL 465
+ K+DV+S GI ++E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ + +RH +++ L + D+ +V +Y N L D I +R +++ +
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEI-----IMVIEYAGN-ELFDYIV---QRDKMSEQE 104
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
++ + + Y H + I HRD+K N+LLD LN K+ADFGL+ +G+ T
Sbjct: 105 ARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT 161
Query: 430 TRVAGTFGYLAPEYALYGQLTE--KSDVYSFGIVILELMSGRKVLDTSTSP--FQLITDW 485
+ G+ Y APE + G+L + DV+S G+++ ++ R D + P F+ I++
Sbjct: 162 S--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG 218
Query: 486 AWVLAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL 521
+ L K + GA +++R ++V L
Sbjct: 219 VYTLPK-----------FLSPGAAGLIKRMLIVNPL 243
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + IG G+ G ++ + GN A+K ILD + K E
Sbjct: 29 KWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 87
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y+P G + SH R+ +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRIGR 137
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+L+D + KVADFG AK+ ++G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-VKG 193
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ + +RH +++ L + D+ +V +Y N L D I +R +++ +
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEI-----IMVIEYAGN-ELFDYIV---QRDKMSEQE 113
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
++ + + Y H + I HRD+K N+LLD LN K+ADFGL+ +G+ T
Sbjct: 114 ARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT 170
Query: 430 TRVAGTFGYLAPEYALYGQLTE--KSDVYSFGIVILELMSGRKVLDTSTSP--FQLITDW 485
+ G+ Y APE + G+L + DV+S G+++ ++ R D + P F+ I++
Sbjct: 171 S--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG 227
Query: 486 AWVLAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL 521
+ L K + GA +++R ++V L
Sbjct: 228 VYTLPK-----------FLSPGAAGLIKRMLIVNPL 252
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ + +RH +++ L + D+ +V +Y N L D I +R +++ +
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEI-----IMVIEYAGN-ELFDYIV---QRDKMSEQE 114
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
++ + + Y H + I HRD+K N+LLD LN K+ADFGL+ +G+ T
Sbjct: 115 ARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT 171
Query: 430 TRVAGTFGYLAPEYALYGQLTE--KSDVYSFGIVILELMSGRKVLDTSTSP--FQLITDW 485
+ G+ Y APE + G+L + DV+S G+++ ++ R D + P F+ I++
Sbjct: 172 S--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG 228
Query: 486 AWVLAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL 521
+ L K + GA +++R ++V L
Sbjct: 229 VYTLPK-----------FLSPGAAGLIKRMLIVNPL 253
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 326 RGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ +LV + M + L I + +++++ ++ + GI +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVI 197
Query: 445 LYGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
L E D++S G ++ E L GR +D
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 21/190 (11%)
Query: 286 RH---GNLVAVKQI--LDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRR 340
RH G VAVK I L++ + EV I+ + H N++ L T K
Sbjct: 34 RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE-----KTL 88
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKST 400
+LV +Y G + D + ++H R + + + + + Y H I HRD+K+
Sbjct: 89 YLVMEYASGGEVFDYL-VAHGR--MKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAE 142
Query: 401 NILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE--KSDVYSF 458
N+LLD+++N K+ADFG + + G+ T G+ Y APE G+ + + DV+S
Sbjct: 143 NLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPE-LFQGKKYDGPEVDVWSL 199
Query: 459 GIVILELMSG 468
G+++ L+SG
Sbjct: 200 GVILYTLVSG 209
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 272 IGQGASGIVY--------KGTLRHGNLVAVKQILDLDTKGD-EDFTNEVEIISKI-RHRN 321
+G+GA G V K + VAVK + D T+ D D +E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 322 LLSLRGCC--------VTSDDSSGK-RRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKK 372
+++L G C + + S G R +L P S +I+ +Q+T+
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVS 161
Query: 373 IIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTR 431
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ + + TT
Sbjct: 162 CTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 432 VAGTFGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 467
++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 219 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 32/228 (14%)
Query: 262 ATNGFSQNNLIGQGASGIVYKGTLRH-GNLVAVKQI-----------LDLDTKGDEDFTN 309
AT+ + IG GA G VYK H G+ VA+K + L + T
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPIST------VR 60
Query: 310 EVEIISKIR---HRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLT 366
EV ++ ++ H N++ L C TS + LV++++ D + K
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ----DLRTYLDKAPPPG 116
Query: 367 WPQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
P K ++ +G+ +LH I HRD+K NIL+ S K+ADFGLA+ +
Sbjct: 117 LPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR--IYS 171
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVL 472
+ T V T Y APE L D++S G + E+ + +
Sbjct: 172 YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 219
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 21/190 (11%)
Query: 286 RH---GNLVAVKQI--LDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRR 340
RH G VAVK I L++ + EV I+ + H N++ L T K
Sbjct: 34 RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE-----KTL 88
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKST 400
+LV +Y G + D + ++H R + + + + + Y H I HRD+K+
Sbjct: 89 YLVMEYASGGEVFDYL-VAHGR--MKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAE 142
Query: 401 NILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE--KSDVYSF 458
N+LLD+++N K+ADFG + + G+ T G+ Y APE G+ + + DV+S
Sbjct: 143 NLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPE-LFQGKKYDGPEVDVWSL 199
Query: 459 GIVILELMSG 468
G+++ L+SG
Sbjct: 200 GVILYTLVSG 209
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 258 ELEQATNGFSQNNLIGQGASGIVYKGTLRH------GNLVAVKQILDLDTKGDE-DFTNE 310
E E A + + +GQG+ G+VY+G + VA+K + + + + +F NE
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 311 VEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNIS----ISHKRKQLT 366
++ + +++ L G S G+ ++ + M G L + L
Sbjct: 69 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 367 WPQRKKIIV---DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE 423
P K+I ++A G+AYL+ HRD+ + N ++ + K+ DFG+ + E
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 424 -------GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILEL 465
G L R +++PE G T SDV+SFG+V+ E+
Sbjct: 181 TDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 34/221 (15%)
Query: 272 IGQGASGIVY--------KGTLRHGNLVAVKQILDLDTKGD-EDFTNEVEIISKI-RHRN 321
+G+GA G V K + VAVK + D T+ D D +E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-------------RKQLTWP 368
++ L G C T D +++ +Y G L + + +Q+T+
Sbjct: 103 IIHLLGAC-TQDGPL----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 369 QRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSH 427
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 428 LTTRVAGTFGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 467
TT ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 215 KTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 326 RGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ +LV + M + L I + +++++ ++ + GI +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVI 197
Query: 445 LYGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
L E D++S G ++ E L GR +D
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 36/222 (16%)
Query: 272 IGQGASGIVY--------KGTLRHGNLVAVKQILDLDTKGD-EDFTNEVEIISKI-RHRN 321
+G+GA G V K + VAVK + D T+ D D +E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-------------RKQLTWP 368
+++L G C T D +++ +Y G L + + +Q+T+
Sbjct: 103 IINLLGAC-TQDGPL----YVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 369 QRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK--QSLEGHS 426
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ +++
Sbjct: 158 DLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 427 HLTTRVAGTFGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 467
TT ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 215 K-TTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 36/222 (16%)
Query: 272 IGQGASGIVY--------KGTLRHGNLVAVKQILDLDTKGD-EDFTNEVEIISKI-RHRN 321
+G+GA G V K + VAVK + D T+ D D +E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-------------RKQLTWP 368
+++L G C T D +++ +Y G L + + +Q+T+
Sbjct: 103 IINLLGAC-TQDGPL----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 369 QRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK--QSLEGHS 426
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ +++
Sbjct: 158 DLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 427 HLTTRVAGTFGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 467
TT ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 215 K-TTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 34/221 (15%)
Query: 272 IGQGASGIVY--------KGTLRHGNLVAVKQILDLDTKGD-EDFTNEVEIISKI-RHRN 321
+G+GA G V K + VAVK + D T+ D D +E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK-------------RKQLTWP 368
+++L G C T D +++ +Y G L + + +Q+T+
Sbjct: 103 IINLLGAC-TQDGPL----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 369 QRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSH 427
+A+G+ YL HRD+ + N+L+ ++ADFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
Query: 428 LTTRVAGTFGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 467
TT ++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 215 KTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 107/232 (46%), Gaps = 20/232 (8%)
Query: 263 TNGFSQNNLIGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDFT-NEVEIISKIRHR 320
++ F +L+G+GA G+V T + G +VA+K+I D T E++I+ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++++ + +++ + M L IS + L+ + I +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVIST----QMLSDDHIQYFIYQTLRA 124
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK---QSLEGHSHLTTRVAG--- 434
+ LH + HRD+K +N+L++S + KV DFGLA+ +S +S T + +G
Sbjct: 125 VKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 435 ---TFGYLAPEYALY-GQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
T Y APE L + + DV+S G ++ EL R + QL+
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 264 NGFSQNNLIGQGASGIVY----KGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
N F L+G+G G V K T R+ + +++ + + E ++ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII-VDVA 378
L +L+ T D R V +Y G L ++S R+++ +R + ++
Sbjct: 65 PFLTALKYAFQTHD-----RLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIV 115
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
+ YLH + +RDIK N++LD + + K+ DFGL K+ + + + GT Y
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEY 171
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
LAPE D + G+V+ E+M GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 258 ELEQATNGFSQNNLIGQGASGIVYKGTLRH------GNLVAVKQILDLDTKGDE-DFTNE 310
E E A + + +GQG+ G+VY+G + VA+K + + + + +F NE
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 311 VEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ----LT 366
++ + +++ L G S G+ ++ + M G L + + L
Sbjct: 66 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 367 WPQRKKIIV---DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE 423
P K+I ++A G+AYL+ HRD+ + N + + K+ DFG+ + E
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 424 -------GHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILEL 465
G L R +++PE G T SDV+SFG+V+ E+
Sbjct: 178 TDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 26/217 (11%)
Query: 272 IGQGASGIVY--------KGTLRHGNLVAVKQILDLDTKGD-EDFTNEVEIISKI-RHRN 321
+G+GA G V K + VAVK + D T+ D D +E+E++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 322 LLSLRGCC--------VTSDDSSGK-RRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKK 372
+++L G C + S G R +L P S +I+ +Q+T+
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVS 161
Query: 373 IIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTR 431
+A+G+ YL HRD+ + N+L+ K+ADFGLA+ + + TT
Sbjct: 162 CTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 432 VAGTFGYLAPEYALYGQL-TEKSDVYSFGIVILELMS 467
++APE AL+ ++ T +SDV+SFG+++ E+ +
Sbjct: 219 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 20/232 (8%)
Query: 263 TNGFSQNNLIGQGASGIVYKGTLR-HGNLVAVKQILDLDTKGDEDFT-NEVEIISKIRHR 320
++ F +L+G+GA G+V T + G +VA+K+I D T E++I+ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++++ + +++ + M L IS + L+ + I +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVIST----QMLSDDHIQYFIYQTLRA 124
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK---QSLEGHSHLT------TR 431
+ LH + HRD+K +N+L++S + KV DFGLA+ +S +S T T
Sbjct: 125 VKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 432 VAGTFGYLAPEYALY-GQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
T Y APE L + + DV+S G ++ EL R + QL+
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 101/200 (50%), Gaps = 17/200 (8%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLLSLRGCCV 330
+G GA G VYK + +++A +++D ++ + ED+ E++I++ H N++ L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
++ +++ ++ G + D + + +R LT Q + + + YLH
Sbjct: 105 YENN-----LWILIEFCAGGAV-DAVMLELERP-LTESQIQVVCKQTLDALNYLHDN--- 154
Query: 391 GIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLT 450
I HRD+K+ NIL + + K+ADFG++ ++ + GT ++APE +
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-GTPYWMAPEVVMCETSK 213
Query: 451 E-----KSDVYSFGIVILEL 465
+ K+DV+S GI ++E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 107/232 (46%), Gaps = 20/232 (8%)
Query: 263 TNGFSQNNLIGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDFT-NEVEIISKIRHR 320
++ F +L+G+GA G+V T + G +VA+K+I D T E++I+ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
N++++ + +++ + M L IS + L+ + I +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVIST----QMLSDDHIQYFIYQTLRA 124
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK---QSLEGHSHLTTRVAG--- 434
+ LH + HRD+K +N+L++S + KV DFGLA+ +S +S T + +G
Sbjct: 125 VKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 435 ---TFGYLAPEYALY-GQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLI 482
T Y APE L + + DV+S G ++ EL R + QL+
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 103/205 (50%), Gaps = 25/205 (12%)
Query: 272 IGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCV 330
+G GA G+V++ T R GN A K ++ E E++ +S +RH L++L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF- 223
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
DD+ ++Y++M G L + ++ H + ++ + + + V KG+ ++H +
Sbjct: 224 -EDDNE---MVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMH---EN 274
Query: 391 GIYHRDIKSTNILLDSELNA--KVADFGLA-----KQSLEGHSHLTTRVAGTFGYLAPEY 443
H D+K NI+ ++ + K+ DFGL KQS++ +TT GT + APE
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK----VTT---GTAEFAAPEV 327
Query: 444 ALYGQLTEKSDVYSFGIVILELMSG 468
A + +D++S G++ L+SG
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 264 NGFSQNNLIGQGASGIVY----KGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
N F L+G+G G V K T R+ + +++ + + E ++ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII-VDVA 378
L +L+ T D R V +Y G L ++S R+++ +R + ++
Sbjct: 65 PFLTALKYAFQTHD-----RLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIV 115
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
+ YLH + +RDIK N++LD + + K+ DFGL K+ + + + GT Y
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEY 171
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
LAPE D + G+V+ E+M GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 264 NGFSQNNLIGQGASGIVY----KGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
N F L+G+G G V K T R+ + +++ + + E ++ RH
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII-VDVA 378
L +L+ T D R V +Y G L ++S R+++ +R + ++
Sbjct: 70 PFLTALKYAFQTHD-----RLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIV 120
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
+ YLH + +RDIK N++LD + + K+ DFGL K+ + + + GT Y
Sbjct: 121 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEY 176
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
LAPE D + G+V+ E+M GR
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++SL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 82
Query: 326 RGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ +LV + M + L I + +++++ ++ + GI +L
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 136
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE
Sbjct: 137 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVI 191
Query: 445 LYGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
L E D++S G ++ E L GR +D
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 264 NGFSQNNLIGQGASGIVY----KGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
N F L+G+G G V K T R+ + +++ + + E ++ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII-VDVA 378
L +L+ T D R V +Y G L ++S R+++ +R + ++
Sbjct: 65 PFLTALKYAFQTHD-----RLCFVMEYANGGELFFHLS----RERVFTEERARFYGAEIV 115
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
+ YLH + +RDIK N++LD + + K+ DFGL K+ + + + GT Y
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEY 171
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
LAPE D + G+V+ E+M GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 271 LIGQ-GASGIVYKGTLRHGNLVAVKQILDLDTKGD-EDFTNEVEIISKIRHRNLLSLRGC 328
+IG+ G G VYK + +++A +++D ++ + ED+ E++I++ H N++ L
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
++ +++ ++ G + D + + +R LT Q + + + YLH
Sbjct: 76 FYYENN-----LWILIEFCAGGAV-DAVMLELERP-LTESQIQVVCKQTLDALNYLHDN- 127
Query: 389 KPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
I HRD+K+ NIL + + K+ADFG++ ++ GT ++APE +
Sbjct: 128 --KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 449 LTE-----KSDVYSFGIVILEL 465
+ K+DV+S GI ++E+
Sbjct: 186 SKDRPYDYKADVWSLGITLIEM 207
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 272 IGQGASGIVYKGTLR--HGNLVAVK-QILDLDT----KGDEDFTNEVEIISKIRHRNLLS 324
+G G+ G+V +G G V+V + L D + +DF EV + + HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
L G +T +V + P G+L D + L + V VA+G+ YL
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYL 127
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAPE 442
HRD+ + N+LL + K+ DFGL + + H + F + APE
Sbjct: 128 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 443 YALYGQLTEKSDVYSFGIVILELMS 467
+ SD + FG+ + E+ +
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++SL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 81
Query: 326 RGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ +LV + M + L I + +++++ ++ + GI +L
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 135
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE
Sbjct: 136 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVI 190
Query: 445 LYGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
L E D++S G ++ E L GR +D
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++SL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 89
Query: 326 RGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ +LV + M + L I + +++++ ++ + GI +L
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 143
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE
Sbjct: 144 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVI 198
Query: 445 LYGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
L E D++S G ++ E L GR +D
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 233
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
+ + + + L I + +++++ ++ + GI +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRYYRAPEVIL 198
Query: 446 YGQLTEKSDVYSFGIVILELMSG 468
E D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++SL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 126
Query: 326 RGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ +LV + M + L I + +++++ ++ + GI +L
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 180
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE
Sbjct: 181 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVI 235
Query: 445 LYGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
L E D++S G ++ E L GR +D
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 270
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 103/205 (50%), Gaps = 25/205 (12%)
Query: 272 IGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCV 330
+G GA G+V++ T R GN A K ++ E E++ +S +RH L++L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF- 117
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
DD+ ++Y++M G L + ++ H + ++ + + + V KG+ ++H +
Sbjct: 118 -EDDNE---MVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMH---EN 168
Query: 391 GIYHRDIKSTNILLDSELNA--KVADFGLA-----KQSLEGHSHLTTRVAGTFGYLAPEY 443
H D+K NI+ ++ + K+ DFGL KQS++ +TT GT + APE
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK----VTT---GTAEFAAPEV 221
Query: 444 ALYGQLTEKSDVYSFGIVILELMSG 468
A + +D++S G++ L+SG
Sbjct: 222 AEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 326 RGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ +LV + M + L I + +++++ ++ + GI +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVI 197
Query: 445 LYGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
L E D++S G ++ E L GR +D
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 326 RGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ +LV + M + L I + +++++ ++ + GI +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVI 197
Query: 445 LYGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
L E D++S G ++ E L GR +D
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 10/200 (5%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G K + + V + LD + + + +EV ++ +++H N++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ-LTWPQRKKIIVDVAKGIAYLHYG 387
+ D + ++V +Y G L+ I+ K +Q L +++ + + H
Sbjct: 74 II---DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 388 LKPG--IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
G + HRD+K N+ LD + N K+ DFGLA+ L GT Y++PE
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDEDFAKEFVGTPYYMSPEQMN 189
Query: 446 YGQLTEKSDVYSFGIVILEL 465
EKSD++S G ++ EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++SL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 82
Query: 326 RGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ +LV + M + L I + +++++ ++ + GI +L
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 136
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE
Sbjct: 137 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVI 191
Query: 445 LYGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
L E D++S G ++ E L GR +D
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++SL
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 87
Query: 326 RGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ +LV + M + L I + +++++ ++ + GI +L
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 141
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE
Sbjct: 142 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVI 196
Query: 445 LYGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
L E D++S G ++ E L GR +D
Sbjct: 197 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 231
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G K + + V + LD + + + +EV ++ +++H N++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ-LTWPQRKKIIVDVAKGIAYLHYG 387
+ D + ++V +Y G L+ I+ K +Q L +++ + + H
Sbjct: 74 II---DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 388 LKPG--IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
G + HRD+K N+ LD + N K+ DFGLA+ L + GT Y++PE
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKTFVGTPYYMSPEQMN 189
Query: 446 YGQLTEKSDVYSFGIVILEL 465
EKSD++S G ++ EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++SL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 126
Query: 326 RGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ +LV + M + L I + +++++ ++ + GI +L
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 180
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE
Sbjct: 181 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVI 235
Query: 445 LYGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
L E D++S G ++ E L GR +D
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 270
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 26/194 (13%)
Query: 291 VAVKQILDLDTKGD-EDFTNEVEIISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMP 348
VAVK + D T+ D D +E+E++ I +H+N+++L G C T D +++ +Y
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC-TQDGPL----YVIVEYAS 113
Query: 349 NGTLSDNISISHK-------------RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHR 395
G L + + +Q+T+ +A+G+ YL HR
Sbjct: 114 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHR 170
Query: 396 DIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQL-TEKS 453
D+ + N+L+ K+ADFGLA+ + + TT ++APE AL+ ++ T +S
Sbjct: 171 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQS 229
Query: 454 DVYSFGIVILELMS 467
DV+SFG+++ E+ +
Sbjct: 230 DVWSFGVLMWEIFT 243
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
+ + + + L I + +++++ ++ + GI +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 446 YGQLTEKSDVYSFGIVILELMSG 468
E D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 26/194 (13%)
Query: 291 VAVKQILDLDTKGD-EDFTNEVEIISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMP 348
VAVK + D T+ D D +E+E++ I +H+N+++L G C T D +++ +Y
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC-TQDGPL----YVIVEYAS 116
Query: 349 NGTLSDNISISHK-------------RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHR 395
G L + + +Q+T+ +A+G+ YL HR
Sbjct: 117 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHR 173
Query: 396 DIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQL-TEKS 453
D+ + N+L+ K+ADFGLA+ + + TT ++APE AL+ ++ T +S
Sbjct: 174 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQS 232
Query: 454 DVYSFGIVILELMS 467
DV+SFG+++ E+ +
Sbjct: 233 DVWSFGVLMWEIFT 246
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++ L
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 89
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
+ + + + L I + +++++ ++ + GI +LH
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 144
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 145 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 199
Query: 446 YGQLTEKSDVYSFGIVILELMSG 468
E D++S G ++ E++ G
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLRGC 328
IG G+ G K + + V + LD + + + +EV ++ +++H N++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ-LTWPQRKKIIVDVAKGIAYLHYG 387
+ D + ++V +Y G L+ I+ K +Q L +++ + + H
Sbjct: 74 II---DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 388 LKPG--IYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
G + HRD+K N+ LD + N K+ DFGLA+ L + GT Y++PE
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKAFVGTPYYMSPEQMN 189
Query: 446 YGQLTEKSDVYSFGIVILEL 465
EKSD++S G ++ EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 21/190 (11%)
Query: 286 RH---GNLVAVKQI--LDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRR 340
RH G VAV+ I L++ + EV I+ + H N++ L T K
Sbjct: 34 RHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE-----KTL 88
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKST 400
+LV +Y G + D + ++H R + + + + + Y H I HRD+K+
Sbjct: 89 YLVMEYASGGEVFDYL-VAHGR--MKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAE 142
Query: 401 NILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE--KSDVYSF 458
N+LLD+++N K+ADFG + + G+ T G+ Y APE G+ + + DV+S
Sbjct: 143 NLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPE-LFQGKKYDGPEVDVWSL 199
Query: 459 GIVILELMSG 468
G+++ L+SG
Sbjct: 200 GVILYTLVSG 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 272 IGQGASGIVYKGTLR--HGNLVAVK-QILDLDT----KGDEDFTNEVEIISKIRHRNLLS 324
+G G+ G+V +G G V+V + L D + +DF EV + + HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
L G +T +V + P G+L D + L + V VA+G+ YL
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYL 131
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAPE 442
HRD+ + N+LL + K+ DFGL + + H + F + APE
Sbjct: 132 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 443 YALYGQLTEKSDVYSFGIVILELMS 467
+ SD + FG+ + E+ +
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 272 IGQGASGIVYKGTLR--HGNLVAVK-QILDLDT----KGDEDFTNEVEIISKIRHRNLLS 324
+G G+ G+V +G G V+V + L D + +DF EV + + HRNL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
L G +T +V + P G+L D + L + V VA+G+ YL
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYL 137
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAPE 442
HRD+ + N+LL + K+ DFGL + + H + F + APE
Sbjct: 138 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 443 YALYGQLTEKSDVYSFGIVILELMS 467
+ SD + FG+ + E+ +
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 26/194 (13%)
Query: 291 VAVKQILDLDTKGD-EDFTNEVEIISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMP 348
VAVK + D T+ D D +E+E++ I +H+N+++L G C T D +++ +Y
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC-TQDGPL----YVIVEYAS 170
Query: 349 NGTLSDNISISHK-------------RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHR 395
G L + + +Q+T+ +A+G+ YL HR
Sbjct: 171 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHR 227
Query: 396 DIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQL-TEKS 453
D+ + N+L+ K+ADFGLA+ + + TT ++APE AL+ ++ T +S
Sbjct: 228 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQS 286
Query: 454 DVYSFGIVILELMS 467
DV+SFG+++ E+ +
Sbjct: 287 DVWSFGVLMWEIFT 300
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 26/194 (13%)
Query: 291 VAVKQILDLDTKGD-EDFTNEVEIISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMP 348
VAVK + D T+ D D +E+E++ I +H+N+++L G C T D +++ +Y
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC-TQDGPL----YVIVEYAS 111
Query: 349 NGTLSDNISISHK-------------RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHR 395
G L + + +Q+T+ +A+G+ YL HR
Sbjct: 112 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHR 168
Query: 396 DIKSTNILLDSELNAKVADFGLAKQ-SLEGHSHLTTRVAGTFGYLAPEYALYGQL-TEKS 453
D+ + N+L+ K+ADFGLA+ + + TT ++APE AL+ ++ T +S
Sbjct: 169 DLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQS 227
Query: 454 DVYSFGIVILELMS 467
DV+SFG+++ E+ +
Sbjct: 228 DVWSFGVLMWEIFT 241
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 272 IGQGASGIVYKGTLR--HGNLVAVK-QILDLDT----KGDEDFTNEVEIISKIRHRNLLS 324
+G G+ G+V +G G V+V + L D + +DF EV + + HRNL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
L G +T +V + P G+L D + L + V VA+G+ YL
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYL 137
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAPE 442
HRD+ + N+LL + K+ DFGL + + H + F + APE
Sbjct: 138 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 443 YALYGQLTEKSDVYSFGIVILELMS 467
+ SD + FG+ + E+ +
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 272 IGQGASGIVYKGTLR--HGNLVAVK-QILDLDT----KGDEDFTNEVEIISKIRHRNLLS 324
+G G+ G+V +G G V+V + L D + +DF EV + + HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
L G +T +V + P G+L D + L + V VA+G+ YL
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYL 131
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAPE 442
HRD+ + N+LL + K+ DFGL + + H + F + APE
Sbjct: 132 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 443 YALYGQLTEKSDVYSFGIVILELMS 467
+ SD + FG+ + E+ +
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 272 IGQGASGIVYKGTLR--HGNLVAVK-QILDLDT----KGDEDFTNEVEIISKIRHRNLLS 324
+G G+ G+V +G G V+V + L D + +DF EV + + HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
L G +T +V + P G+L D + L + V VA+G+ YL
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYL 127
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAPE 442
HRD+ + N+LL + K+ DFGL + + H + F + APE
Sbjct: 128 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 443 YALYGQLTEKSDVYSFGIVILELMS 467
+ SD + FG+ + E+ +
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 272 IGQGASGIVYKGTLR--HGNLVAVK-QILDLDT----KGDEDFTNEVEIISKIRHRNLLS 324
+G G+ G+V +G G V+V + L D + +DF EV + + HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
L G +T +V + P G+L D + L + V VA+G+ YL
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYL 127
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH--LTTRVAGTFGYLAPE 442
HRD+ + N+LL + K+ DFGL + + H + F + APE
Sbjct: 128 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 443 YALYGQLTEKSDVYSFGIVILELMS 467
+ SD + FG+ + E+ +
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++SL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 89
Query: 326 RGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
+ +LV + M + L I + +++++ ++ + GI +L
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 143
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYA 444
H GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE
Sbjct: 144 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVI 198
Query: 445 LYGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
L E D++S G ++ E L GR +D
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 233
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 286 RH---GNLVAVKQI--LDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRR 340
RH G VAV+ I L++ + EV I+ + H N++ L T K
Sbjct: 34 RHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE-----KTL 88
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKST 400
+LV +Y G + D + ++H R + + + + + Y H I HRD+K+
Sbjct: 89 YLVMEYASGGEVFDYL-VAHGR--MKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAE 142
Query: 401 NILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE--KSDVYSF 458
N+LLD+++N K+ADFG + + G+ G+ Y APE G+ + + DV+S
Sbjct: 143 NLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPE-LFQGKKYDGPEVDVWSL 199
Query: 459 GIVILELMSG 468
G+++ L+SG
Sbjct: 200 GVILYTLVSG 209
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 266 FSQNNLI---GQGASGIVYKGTLRHGNLVAVK--QILDLDTKGDEDFTNEVEIISKIRHR 320
F Q N + + SG ++KG + GN + VK ++ D T+ DF E + H
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRK--KIIVDVA 378
N+L + G C + L+ +MP G+L + + H+ Q + K +D+A
Sbjct: 68 NVLPVLGACQS---PPAPHPTLITHWMPYGSLYN---VLHEGTNFVVDQSQAVKFALDMA 121
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKV--ADFGLAKQSLEGHSHLTTRVAGTF 436
+G+A+LH L+P I + S ++++D ++ A++ AD + QS G + VA
Sbjct: 122 RGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-PGRMYAPAWVAPEA 179
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
PE +D++SF +++ EL++
Sbjct: 180 LQKKPE----DTNRRSADMWSFAVLLWELVT 206
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
+ + + + L I + +++++ ++ + GI +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 446 YGQLTEKSDVYSFGIVILELMSG 468
E D++S G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 272 IGQGASGIVYKGT-LRHGNLVAVKQI--LDLDTKGDEDFTNEVEIISKIRHRNLLSLRGC 328
+G+GA +V + + G A K I L + + E I ++H N++ L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
S +L++D + G L ++I R+ + I + + + + H
Sbjct: 90 I-----SEEGHHYLIFDLVTGGELFEDIV---AREYYSEADASHCIQQILEAVLHCH--- 138
Query: 389 KPGIYHRDIKSTNILLDSELNA---KVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
+ G+ HRD+K N+LL S+L K+ADFGLA + +EG AGT GYL+PE
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE-VEGEQQAWFGFAGTPGYLSPEVLR 197
Query: 446 YGQLTEKSDVYSFGIVILELMSG 468
+ D+++ G+++ L+ G
Sbjct: 198 KDPYGKPVDLWACGVILYILLVG 220
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 21/190 (11%)
Query: 286 RH---GNLVAVKQI--LDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRR 340
RH G VAVK I L++ + EV I+ + H N++ L T K
Sbjct: 34 RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE-----KTL 88
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKST 400
+LV +Y G + D + ++H R + + + + + Y H I HRD+K+
Sbjct: 89 YLVMEYASGGEVFDYL-VAHGR--MKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAE 142
Query: 401 NILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE--KSDVYSF 458
N+LLD+++N K+ADFG + + G+ G Y APE G+ + + DV+S
Sbjct: 143 NLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSL 199
Query: 459 GIVILELMSG 468
G+++ L+SG
Sbjct: 200 GVILYTLVSG 209
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 127/281 (45%), Gaps = 50/281 (17%)
Query: 225 NKKRKQIALHEQFVSNLQ-ASVLPNSGAKWFHVSELEQATN---GFSQNNL-----IGQG 275
+K +KQ ++ S LQ V +S ++F+V E + F + NL +G G
Sbjct: 1 HKYKKQF----RYESQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSG 56
Query: 276 ASGIVYKGTLRHGN------LVAVKQILD-LDTKGDEDFTNEVEIISKI-RHRNLLSLRG 327
A G V T + VAVK + + D+ E +E+++++++ H N+++L G
Sbjct: 57 AFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLG 116
Query: 328 CCVTSDDSSGKRRFLVYDYMPNGTL------------SDNISISHKRKQ--------LTW 367
C S +L+++Y G L D I ++++ LT+
Sbjct: 117 ACTLSGPI-----YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 368 PQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH 427
VAKG+ +L + HRD+ + N+L+ K+ DFGLA+ + ++
Sbjct: 172 EDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 428 LTTRVAGT-FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ A ++APE G T KSDV+S+GI++ E+ S
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 29/221 (13%)
Query: 272 IGQGASGIVYKGTL-RHGNLVAVKQILDLDTKGDEDFTN----EVEIISKIRHRNLLSLR 326
+G GA G V R G VA+K++ E F E+ ++ +RH N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYR--PFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 327 GCCV---TSDDSSGKRRFLVYDYMPN--GTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
T DD + +LV +M G L + + R Q ++ + KG+
Sbjct: 91 DVFTPDETLDDFTD--FYLVMPFMGTDLGKLMKHEKLGEDRIQF-------LVYQMLKGL 141
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
Y+H GI HRD+K N+ ++ + K+ DFGLA+Q+ S + V T Y AP
Sbjct: 142 RYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA---DSEMXGXVV-TRWYRAP 194
Query: 442 EYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
E L + + T+ D++S G ++ E+++G+ + S QL
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQL 235
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 132/317 (41%), Gaps = 74/317 (23%)
Query: 270 NLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDED---FTNEVEIISKIRHRNLLSLR 326
LIG+G G VY G HG VA++ ++D++ ++ F EV + RH N++
Sbjct: 39 ELIGKGRFGQVYHGRW-HGE-VAIR-LIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 327 GCCVTSDD-----SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
G C++ S K R L Y + + + +++ + ++I ++ KG+
Sbjct: 96 GACMSPPHLAIITSLCKGRTL-YSVVRDAKIVLDVN-----------KTRQIAQEIVKGM 143
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNAKVA--DFGLAKQS---LEGHSHLTTRVA-GT 435
YLH GI H+D+KS N+ D N KV DFGL S G R+ G
Sbjct: 144 GYLH---AKGILHKDLKSKNVFYD---NGKVVITDFGLFSISGVLQAGRREDKLRIQNGW 197
Query: 436 FGYLAPEYALYGQL-----------TEKSDVYSFGIVILELMSGRKVLDTSTSP---FQL 481
+LAPE + QL ++ SDV++ G + EL + T + +Q+
Sbjct: 198 LCHLAPE--IIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM 255
Query: 482 ITDWAWVLAKSGKVDDIFDEFIRAEGARAVMERFVLVGILCAHVMVALRPTITDALKMLE 541
T L++ G +I D + + C RPT T + MLE
Sbjct: 256 GTGMKPNLSQIGMGKEISD-----------------ILLFCWAFEQEERPTFTKLMDMLE 298
Query: 542 GDIDIPKLPDRPLPLSH 558
KLP R LSH
Sbjct: 299 ------KLPKRNRRLSH 309
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 26/194 (13%)
Query: 291 VAVKQILDLDTKGD-EDFTNEVEIISKI-RHRNLLSLRGCC--------VTSDDSSGKRR 340
VAVK + T+ D D +E+E++ I +H+N+++L G C + S G R
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 341 FLVYDYMPNGTLSDNISISHK-RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKS 399
+ P G L + + SH +QL+ VA+G+ YL HRD+ +
Sbjct: 123 EYLQARRPPG-LEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 400 TNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFG-----YLAPEYALYGQL-TEKS 453
N+L+ + K+ADFGLA+ H+ T G ++APE AL+ ++ T +S
Sbjct: 179 RNVLVTEDNVMKIADFGLARDI----HHIDXXKKTTNGRLPVKWMAPE-ALFDRIYTHQS 233
Query: 454 DVYSFGIVILELMS 467
DV+SFG+++ E+ +
Sbjct: 234 DVWSFGVLLWEIFT 247
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 25/235 (10%)
Query: 266 FSQNNLIGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRH 319
+ Q IG GA GIV + L G VAVK++ T + E+ ++ + H
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNH 80
Query: 320 RNLLSLRGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
+N++SL + +LV + M + L I + +++++ ++ +
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSY-----LLYQML 134
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
GI +LH GI HRD+K +NI++ S+ K+ DFGLA+ + + + T T Y
Sbjct: 135 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--STNFMMTPYVVTRYY 189
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWVLAKSG 493
APE L E D++S G ++ EL+ G + + I W V+ + G
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH----IDQWNKVIEQLG 240
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 291 VAVKQILDLDTKGD-EDFTNEVEIISKI-RHRNLLSLRGCC--------VTSDDSSGKRR 340
VAVK + T+ D D +E+E++ I +H+N+++L G C + S G R
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 341 FLVYDYMPNGTLSDNISISHK-RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKS 399
+ P G L + + SH +QL+ VA+G+ YL HRD+ +
Sbjct: 164 EYLQARRPPG-LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 219
Query: 400 TNILLDSELNAKVADFGLAKQSLE-GHSHLTTRVAGTFGYLAPEYALYGQL-TEKSDVYS 457
N+L+ + K+ADFGLA+ + TT ++APE AL+ ++ T +SDV+S
Sbjct: 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWS 278
Query: 458 FGIVILELMS 467
FG+++ E+ +
Sbjct: 279 FGVLLWEIFT 288
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 15/140 (10%)
Query: 342 LVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTN 401
L+ DY+ G L ++S +R++ T + + + ++ + +LH K GI +RDIK N
Sbjct: 136 LILDYINGGELFTHLS---QRERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLEN 189
Query: 402 ILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKS--DVYSFG 459
ILLDS + + DFGL+K+ + + GT Y+AP+ G D +S G
Sbjct: 190 ILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG 249
Query: 460 IVILELMSGRKVLDTSTSPF 479
+++ EL++G SPF
Sbjct: 250 VLMYELLTG-------ASPF 262
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 18/212 (8%)
Query: 263 TNGFSQNNLIGQGASGIVYKGT-LRHGNLVAVKQI--LDLDTKGDEDFTNEVEIISKIRH 319
T+ + IG+GA +V + L G+ A K I L + + E I ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
N++ L S +LV+D + G L ++I R+ + I + +
Sbjct: 63 SNIVRLHDSI-----SEEGFHYLVFDLVTGGELFEDIV---AREYYSEADASHCIQQILE 114
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNA---KVADFGLAKQSLEGHSHLTTRVAGTF 436
+ + H + G+ HRD+K N+LL S+ K+ADFGLA + ++G AGT
Sbjct: 115 AVLHCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGDQQAWFGFAGTP 170
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GYL+PE + D+++ G+++ L+ G
Sbjct: 171 GYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 286 RH---GNLVAVKQI--LDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRR 340
RH G VAVK I L+ + EV I+ + H N++ L T K
Sbjct: 35 RHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE-----KTL 89
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKST 400
+LV +Y G + D + ++H R + + + + + Y H + I HRD+K+
Sbjct: 90 YLVMEYASGGEVFDYL-VAHGR--MKEKEARAKFRQIVSAVQYCH---QKYIVHRDLKAE 143
Query: 401 NILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE--KSDVYSF 458
N+LLD ++N K+ADFG + + G+ T G+ Y APE G+ + + DV+S
Sbjct: 144 NLLLDGDMNIKIADFGFSNEFTVGNKLDT--FCGSPPYAAPE-LFQGKKYDGPEVDVWSL 200
Query: 459 GIVILELMSG 468
G+++ L+SG
Sbjct: 201 GVILYTLVSG 210
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 285 LRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVY 344
L G+ A+K+IL + + E+ E ++ H N+L L C+ + + +L+
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL-RERGAKHEAWLLL 109
Query: 345 DYMPNGTLSDNIS-ISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNIL 403
+ GTL + I + K LT Q +++ + +G+ +H G HRD+K TNIL
Sbjct: 110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNIL 166
Query: 404 LDSELNAKVADFGLAKQS---LEGHSHLTT-----RVAGTFGYLAPE-YALYGQ--LTEK 452
L E + D G Q+ +EG T T Y APE +++ + E+
Sbjct: 167 LGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDER 226
Query: 453 SDVYSFGIVILELMSGRKVLD 473
+DV+S G V+ +M G D
Sbjct: 227 TDVWSLGCVLYAMMFGEGPYD 247
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
ED EV I+ +I+H N+++L D L+ + + G L D ++ +++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDV-----ILILELVAGGELFDFLA---EKES 110
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
G+ + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 168 IDFGNEF--KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 217
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 291 VAVKQILDLDTKGD-EDFTNEVEIISKI-RHRNLLSLRGCC--------VTSDDSSGKRR 340
VAVK + T+ D D +E+E++ I +H+N+++L G C + S G R
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 341 FLVYDYMPNGTLSDNISISHK-RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKS 399
+ P G L + + SH +QL+ VA+G+ YL HRD+ +
Sbjct: 116 EYLQARRPPG-LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 171
Query: 400 TNILLDSELNAKVADFGLAKQSLE-GHSHLTTRVAGTFGYLAPEYALYGQL-TEKSDVYS 457
N+L+ + K+ADFGLA+ + TT ++APE AL+ ++ T +SDV+S
Sbjct: 172 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWS 230
Query: 458 FGIVILELMS 467
FG+++ E+ +
Sbjct: 231 FGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 291 VAVKQILDLDTKGD-EDFTNEVEIISKI-RHRNLLSLRGCC--------VTSDDSSGKRR 340
VAVK + T+ D D +E+E++ I +H+N+++L G C + S G R
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 341 FLVYDYMPNGTLSDNISISHK-RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKS 399
+ P G L + + SH +QL+ VA+G+ YL HRD+ +
Sbjct: 123 EYLQARRPPG-LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 400 TNILLDSELNAKVADFGLAKQSLE-GHSHLTTRVAGTFGYLAPEYALYGQL-TEKSDVYS 457
N+L+ + K+ADFGLA+ + TT ++APE AL+ ++ T +SDV+S
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWS 237
Query: 458 FGIVILELMS 467
FG+++ E+ +
Sbjct: 238 FGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 291 VAVKQILDLDTKGD-EDFTNEVEIISKI-RHRNLLSLRGCC--------VTSDDSSGKRR 340
VAVK + T+ D D +E+E++ I +H+N+++L G C + S G R
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 341 FLVYDYMPNGTLSDNISISHK-RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKS 399
+ P G L + + SH +QL+ VA+G+ YL HRD+ +
Sbjct: 115 EYLQARRPPG-LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 170
Query: 400 TNILLDSELNAKVADFGLAKQSLE-GHSHLTTRVAGTFGYLAPEYALYGQL-TEKSDVYS 457
N+L+ + K+ADFGLA+ + TT ++APE AL+ ++ T +SDV+S
Sbjct: 171 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWS 229
Query: 458 FGIVILELMS 467
FG+++ E+ +
Sbjct: 230 FGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 291 VAVKQILDLDTKGD-EDFTNEVEIISKI-RHRNLLSLRGCC--------VTSDDSSGKRR 340
VAVK + T+ D D +E+E++ I +H+N+++L G C + S G R
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 341 FLVYDYMPNGTLSDNISISHK-RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKS 399
+ P G L + + SH +QL+ VA+G+ YL HRD+ +
Sbjct: 112 EYLQARRPPG-LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 167
Query: 400 TNILLDSELNAKVADFGLAKQSLE-GHSHLTTRVAGTFGYLAPEYALYGQL-TEKSDVYS 457
N+L+ + K+ADFGLA+ + TT ++APE AL+ ++ T +SDV+S
Sbjct: 168 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWS 226
Query: 458 FGIVILELMS 467
FG+++ E+ +
Sbjct: 227 FGVLLWEIFT 236
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 110/261 (42%), Gaps = 48/261 (18%)
Query: 253 WFHVSELEQATNGFSQNNLIGQGASGIVYKG------TLRHGNLVAVKQILDLDTKGDED 306
+F L + + IGQG+ G+V +R ++ +I ++ K E
Sbjct: 15 YFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVER 74
Query: 307 FTNEVEIISKIRHRNLLSLRG--------CCVTS---------------DDSSGKRRFLV 343
EV ++ K+ H N+ L C V DDS+GK V
Sbjct: 75 IKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDV 134
Query: 344 YDYM--PNGTLSD---NISISHKRKQLTWPQRKKIIVDVAKGI-AYLHYGLKPGIYHRDI 397
P ++ N SI R+ L + QR+K+I ++ + I + LHY GI HRDI
Sbjct: 135 VKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDI 194
Query: 398 KSTNILL--DSELNAKVADFGLAKQSLE---GHSHLTTRVAGTFGYLAPEY-----ALYG 447
K N L + K+ DFGL+K+ + G + T AGT ++APE YG
Sbjct: 195 KPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYG 254
Query: 448 QLTEKSDVYSFGIVILELMSG 468
K D +S G+++ L+ G
Sbjct: 255 ---PKCDAWSAGVLLHLLLMG 272
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 291 VAVKQILDLDTKGD-EDFTNEVEIISKI-RHRNLLSLRGCC--------VTSDDSSGKRR 340
VAVK + T+ D D +E+E++ I +H+N+++L G C + S G R
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 341 FLVYDYMPNGTLSDNISISHK-RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKS 399
+ P G L + + SH +QL+ VA+G+ YL HRD+ +
Sbjct: 123 EYLQAREPPG-LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 400 TNILLDSELNAKVADFGLAKQSLE-GHSHLTTRVAGTFGYLAPEYALYGQL-TEKSDVYS 457
N+L+ + K+ADFGLA+ + TT ++APE AL+ ++ T +SDV+S
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWS 237
Query: 458 FGIVILELMS 467
FG+++ E+ +
Sbjct: 238 FGVLLWEIFT 247
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 20/220 (9%)
Query: 256 VSELEQATNGF---SQNNLIGQGASGIVYK-GTLRHGNLVAVKQILDLDTKGDEDFTNEV 311
V+ + A N F S+ ++G G G V+K G +A K I K E+ NE+
Sbjct: 78 VTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEI 137
Query: 312 EIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRK 371
+++++ H NL+ L + +D LV +Y+ G L D I + LT
Sbjct: 138 SVMNQLDHANLIQLYDAFESKNDI-----VLVMEYVDGGELFDRII--DESYNLTELDTI 190
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNIL---LDSELNAKVADFGLAKQSLEGHSHL 428
+ + +GI ++H + I H D+K NIL D++ K+ DFGLA++ + L
Sbjct: 191 LFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAK-QIKIIDFGLARR-YKPREKL 245
Query: 429 TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT +LAPE Y ++ +D++S G++ L+SG
Sbjct: 246 KVNF-GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 27/219 (12%)
Query: 272 IGQGASGIVYKGTLR-HGNLVAVKQI-LDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCC 329
+G+G VYKG + NLVA+K+I L+ + EV ++ ++H N+++L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 330 VTSDDSSGKRRFLVYDYMPNGT---LSD--NISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
T K LV++Y+ L D NI H K + + +G+AY
Sbjct: 70 HTE-----KSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLF--------LFQLLRGLAYC 116
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEGHSHLTTRVAGTFGYLAPEY 443
H + + HRD+K N+L++ K+ADFGLA+ +S+ ++ V T Y P+
Sbjct: 117 H---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDI 171
Query: 444 ALYG-QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
L + + D++ G + E+ +GR + ST QL
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 210
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 26/194 (13%)
Query: 291 VAVKQILDLDTKGD-EDFTNEVEIISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMP 348
VAVK + T+ D D +E+E++ I +H+N+++L G C T D +++ +Y
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC-TQDGPL----YVIVEYAS 102
Query: 349 NGTLSDNISI------------SHK-RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHR 395
G L + + SH +QL+ VA+G+ YL HR
Sbjct: 103 KGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 159
Query: 396 DIKSTNILLDSELNAKVADFGLAKQSLE-GHSHLTTRVAGTFGYLAPEYALYGQL-TEKS 453
D+ + N+L+ + K+ADFGLA+ + TT ++APE AL+ ++ T +S
Sbjct: 160 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQS 218
Query: 454 DVYSFGIVILELMS 467
DV+SFG+++ E+ +
Sbjct: 219 DVWSFGVLLWEIFT 232
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++ L
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 90
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
+ + + + L I + +++++ ++ + GI +LH
Sbjct: 91 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 145
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T Y APE L
Sbjct: 146 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRYYRAPEVIL 200
Query: 446 YGQLTEKSDVYSFGIVILELMSG 468
E D++S G ++ E++ G
Sbjct: 201 GMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
ED EV I+ +I+H N+++L D L+ + + G L D ++ +++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDV-----ILILELVAGGELFDFLA---EKES 110
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
G+ + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
ED EV I+ +I+H N+++L D L+ + + G L D ++ +++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDV-----ILILELVAGGELFDFLA---EKES 110
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
G+ + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 217
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 22/221 (9%)
Query: 272 IGQGASGIVYKGT-LRHG-NLVAVKQILDLDTKGDEDF----TNEVEIISKIR---HRNL 322
IG+GA G V+K L++G VA+K++ G+E EV ++ + H N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 323 LSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQR--KKIIVDVAKG 380
+ L C S + LV++++ D + K + P K ++ + +G
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLA 440
+ +LH + HRD+K NIL+ S K+ADFGLA+ + T V T Y A
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR--IYSFQMALTSVVVTLWYRA 187
Query: 441 PEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
PE L D++S G + E+ + + S+ QL
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 228
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
ED EV I+ +I+H N+++L D L+ + + G L D ++ +++
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDV-----ILILELVAGGELFDFLA---EKES 109
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 110 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
G+ + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 167 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
ED EV I+ +I+H N+++L D L+ + + G L D ++ +++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDV-----ILILELVAGGELFDFLA---EKES 110
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
G+ + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 217
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKEIEH 87
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y P G + SH R+ +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYAPGGEM-----FSHLRRIGR 137
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+++D + KV DFGLAK+ ++G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKR-VKG 193
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
ED EV I+ +I+H N+++L D L+ + + G L D ++ +++
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDV-----ILILELVAGGELFDFLA---EKES 109
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 110 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
G+ + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 167 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 22/221 (9%)
Query: 272 IGQGASGIVYKGT-LRHG-NLVAVKQILDLDTKGDEDF----TNEVEIISKIR---HRNL 322
IG+GA G V+K L++G VA+K++ G+E EV ++ + H N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 323 LSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQR--KKIIVDVAKG 380
+ L C S + LV++++ D + K + P K ++ + +G
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLA 440
+ +LH + HRD+K NIL+ S K+ADFGLA+ + T V T Y A
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR--IYSFQMALTSVVVTLWYRA 187
Query: 441 PEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
PE L D++S G + E+ + + S+ QL
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 228
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 22/221 (9%)
Query: 272 IGQGASGIVYKGT-LRHG-NLVAVKQILDLDTKGDEDF----TNEVEIISKIR---HRNL 322
IG+GA G V+K L++G VA+K++ G+E EV ++ + H N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 323 LSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQR--KKIIVDVAKG 380
+ L C S + LV++++ D + K + P K ++ + +G
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 381 IAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLA 440
+ +LH + HRD+K NIL+ S K+ADFGLA+ + T V T Y A
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR--IYSFQMALTSVVVTLWYRA 187
Query: 441 PEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
PE L D++S G + E+ + + S+ QL
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 228
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
ED EV I+ +I+H N+++L D L+ + + G L D ++ +++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDV-----ILILELVAGGELFDFLA---EKES 110
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
G+ + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 217
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
E+ EV I+ +IRH N+++L D L+ + + G L D ++ +++
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDV-----VLILELVSGGELFDFLA---EKES 111
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFG+A +
Sbjct: 112 LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 168
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
G+ + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 169 IEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 218
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L C DD ++ + Y NG L + + RK ++
Sbjct: 85 TRERDVMSRLDHPFFVKLYFCF--QDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 134
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 135 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 191
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 192 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
ED EV I+ +I+H N+++L D L+ + + G L D ++ +++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDV-----ILILELVAGGELFDFLA---EKES 110
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
G+ + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 26/194 (13%)
Query: 291 VAVKQILDLDTKGD-EDFTNEVEIISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMP 348
VAVK + T+ D D +E+E++ I +H+N+++L G C T D +++ +Y
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC-TQDGPL----YVIVEYAS 117
Query: 349 NGTLSDNISI------------SHK-RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHR 395
G L + + SH +QL+ VA+G+ YL HR
Sbjct: 118 KGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 174
Query: 396 DIKSTNILLDSELNAKVADFGLAKQSLE-GHSHLTTRVAGTFGYLAPEYALYGQL-TEKS 453
D+ + N+L+ + K+ADFGLA+ + TT ++APE AL+ ++ T +S
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQS 233
Query: 454 DVYSFGIVILELMS 467
DV+SFG+++ E+ +
Sbjct: 234 DVWSFGVLLWEIFT 247
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
ED EV I+ +I+H N+++L D L+ + + G L D ++ +++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDV-----ILILELVAGGELFDFLA---EKES 110
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
G+ + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
ED EV I+ +I+H N+++L D L+ + + G L D ++ +++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDV-----ILILELVAGGELFDFLA---EKES 110
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
G+ + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
ED EV I+ +I+H N+++L D L+ + + G L D ++ +++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDV-----ILILELVAGGELFDFLA---EKES 110
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
G+ + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 23/191 (12%)
Query: 286 RH---GNLVAVKQILD---LDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKR 339
RH G VA+K I+D L+ + EV I+ + H N++ L T K
Sbjct: 32 RHILTGREVAIK-IIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE-----KT 85
Query: 340 RFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKS 399
+L+ +Y G + D + ++H R + + K + + Y H + I HRD+K+
Sbjct: 86 LYLIMEYASGGEVFDYL-VAHGRMKEKEARSK--FRQIVSAVQYCH---QKRIVHRDLKA 139
Query: 400 TNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE--KSDVYS 457
N+LLD+++N K+ADFG + + G L T G+ Y APE G+ + + DV+S
Sbjct: 140 ENLLLDADMNIKIADFGFSNEFTVG-GKLDT-FCGSPPYAAPE-LFQGKKYDGPEVDVWS 196
Query: 458 FGIVILELMSG 468
G+++ L+SG
Sbjct: 197 LGVILYTLVSG 207
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 264 NGFSQNNLIGQGASGIVY----KGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
N F L+G+G G V K T R+ + +K+ + + E ++ RH
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII-VDVA 378
L +L+ T D R V +Y G L ++S R+++ R + ++
Sbjct: 69 PFLTALKYSFQTHD-----RLCFVMEYANGGELFFHLS----RERVFSEDRARFYGAEIV 119
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
+ YLH + + +RD+K N++LD + + K+ DFGL K+ ++ + + GT Y
Sbjct: 120 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEY 176
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
LAPE D + G+V+ E+M GR
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
ED EV I+ +I+H N+++L D L+ + + G L D ++ +++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDV-----ILILELVAGGELFDFLA---EKES 110
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
G+ + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
E+ EV I+ +IRH N+++L D L+ + + G L D ++ +++
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDV-----VLILELVSGGELFDFLA---EKES 104
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFG+A +
Sbjct: 105 LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
G+ + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 162 IEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 211
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 309 NEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWP 368
+EV ++ ++ H N++ L + +LV + G L D I + R++ +
Sbjct: 70 DEVAVLKQLDHPNIMKLYEFF-----EDKRNYYLVMEVYRGGELFDEIIL---RQKFSEV 121
Query: 369 QRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELN---AKVADFGLAKQSLEGH 425
I+ V G YLH K I HRD+K N+LL+S+ K+ DFGL+ E
Sbjct: 122 DAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH-FEVG 177
Query: 426 SHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+ R+ GT Y+APE L + EK DV+S G+++ L+ G
Sbjct: 178 GKMKERL-GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 264 NGFSQNNLIGQGASGIVY----KGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
N F L+G+G G V K T R+ + +K+ + + E ++ RH
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII-VDVA 378
L +L+ T D R V +Y G L ++S R+++ R + ++
Sbjct: 70 PFLTALKYSFQTHD-----RLCFVMEYANGGELFFHLS----RERVFSEDRARFYGAEIV 120
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
+ YLH + + +RD+K N++LD + + K+ DFGL K+ ++ + + GT Y
Sbjct: 121 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEY 177
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
LAPE D + G+V+ E+M GR
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
E+ EV I+ +IRH N+++L D L+ + + G L D ++ +++
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDV-----VLILELVSGGELFDFLA---EKES 125
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFG+A +
Sbjct: 126 LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 182
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
G+ + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 183 IEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 232
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++ L
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 82
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
+ + + + L I + +++++ ++ + GI +LH
Sbjct: 83 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 137
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 138 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 192
Query: 446 YGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
E D++S G ++ E L GR +D
Sbjct: 193 GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 226
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 264 NGFSQNNLIGQGASGIVY----KGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRH 319
N F L+G+G G V K T R+ + +K+ + + E ++ RH
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII-VDVA 378
L +L+ T D R V +Y G L ++S R+++ R + ++
Sbjct: 68 PFLTALKYSFQTHD-----RLCFVMEYANGGELFFHLS----RERVFSEDRARFYGAEIV 118
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
+ YLH + + +RD+K N++LD + + K+ DFGL K+ ++ + + GT Y
Sbjct: 119 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEY 175
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSGR 469
LAPE D + G+V+ E+M GR
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 272 IGQGASGIVYKGTLRH-GNLVAVKQILDL--DTKGDEDFTNEVEIISKIRHRNLLSLRGC 328
IG+G+ G+V+K R G +VA+K+ L+ D + E+ ++ +++H NL++L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQR--KKIIVDVAKGIAYLHY 386
+R LV++Y + L + R Q P+ K I + + + H
Sbjct: 71 F-----RRKRRLHLVFEYCDHTVLHEL-----DRYQRGVPEHLVKSITWQTLQAVNFCH- 119
Query: 387 GLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALY 446
K HRD+K NIL+ K+ DFG A+ L G S T Y +PE L
Sbjct: 120 --KHNCIHRDVKPENILITKHSVIKLCDFGFAR-LLTGPSDYYDDEVATRWYRSPE-LLV 175
Query: 447 G--QLTEKSDVYSFGIVILELMSG 468
G Q DV++ G V EL+SG
Sbjct: 176 GDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 309 NEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWP 368
+EV ++ ++ H N++ L + +LV + G L D I + R++ +
Sbjct: 53 DEVAVLKQLDHPNIMKLYEFF-----EDKRNYYLVMEVYRGGELFDEIIL---RQKFSEV 104
Query: 369 QRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELN---AKVADFGLAKQSLEGH 425
I+ V G YLH K I HRD+K N+LL+S+ K+ DFGL+ E
Sbjct: 105 DAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH-FEVG 160
Query: 426 SHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+ R+ GT Y+APE L + EK DV+S G+++ L+ G
Sbjct: 161 GKMKERL-GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
ED EV I+ +I+H N+++L D L+ + + G L D ++ +++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDV-----ILILELVAGGELFDFLA---EKES 110
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
G+ + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 217
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++ L
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 93
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
+ + + + L I + +++++ ++ + GI +LH
Sbjct: 94 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 148
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T T Y APE L
Sbjct: 149 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 203
Query: 446 YGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
E D++S G ++ E L GR +D
Sbjct: 204 GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 237
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 286 RH---GNLVAVKQI--LDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRR 340
RH G VAVK I L++ + EV I + H N++ L T K
Sbjct: 34 RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETE-----KTL 88
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKST 400
+LV +Y G + D + ++H R + + K + + Y H I HRD+K+
Sbjct: 89 YLVXEYASGGEVFDYL-VAHGRXKEKEARAK--FRQIVSAVQYCHQKF---IVHRDLKAE 142
Query: 401 NILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE--KSDVYSF 458
N+LLD++ N K+ADFG + + G+ G Y APE G+ + + DV+S
Sbjct: 143 NLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSL 199
Query: 459 GIVILELMSG 468
G+++ L+SG
Sbjct: 200 GVILYTLVSG 209
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 299 LDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISI 358
L + + E I ++H N++ L S +L++D + G L ++I
Sbjct: 49 LSARDHQKLEREARICRLLKHPNIVRLHDSI-----SEEGHHYLIFDLVTGGELFEDIV- 102
Query: 359 SHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNA---KVADF 415
R+ + I + + + + H + G+ HR++K N+LL S+L K+ADF
Sbjct: 103 --AREYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADF 157
Query: 416 GLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GLA + +EG AGT GYL+PE + D+++ G+++ L+ G
Sbjct: 158 GLAIE-VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
ED EV I+ +I+H N+++L D L+ + + G L D ++ +++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDV-----ILIGELVAGGELFDFLA---EKES 110
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
LT + + + + G+ YLH I H D+K NI LLD + K+ DFGLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
G+ + GT ++APE Y L ++D++S G++ L+SG
Sbjct: 168 IDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 88
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y+P G + SH R+ +
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRIGR 138
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+L+D + +V DFG AK+ ++G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKG 194
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 15 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 73
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y+P G + SH R+ +
Sbjct: 74 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRIGR 123
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+L+D + +V DFG AK+ ++G
Sbjct: 124 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKG 179
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 180 R---TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 28/238 (11%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGN-LVAVKQILDLDTKGDEDFTN-----EVEIISKIRH 319
+ + + +G+G VYK ++ N +VA+K+I +D N E++++ ++ H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
N++ L + S LV+D+M + I LT K ++ +
Sbjct: 72 PNIIGLLDAFGHKSNIS-----LVFDFMETDL---EVIIKDNSLVLTPSHIKAYMLMTLQ 123
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYL 439
G+ YLH + I HRD+K N+LLD K+ADFGLAK + +V T Y
Sbjct: 124 GLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYR 179
Query: 440 APEYALYGQLTEKS-DVYSFGIVILEL------MSGRKVLDTSTSPFQLI---TDWAW 487
APE ++ D+++ G ++ EL + G LD T F+ + T+ W
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQW 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 87
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y+P G + SH R+ +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRIGR 137
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+L+D + +V DFG AK+ ++G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKG 193
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 87
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y P G + SH R+ +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYAPGGEM-----FSHLRRIGR 137
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+++D + KV DFG AK+ ++G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKG 193
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 87
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y+P G + SH R+ +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRIGR 137
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+L+D + +V DFG AK+ ++G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKG 193
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 87
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y+P G + SH R+ +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRIGR 137
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+L+D + +V DFG AK+ ++G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKG 193
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 263 TNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILD---LDTKGDEDFTNEVEIISKIRH 319
T+ + +G+GA +V + + +I++ L + + E I ++H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
N++ L S +LV+D + G L ++I R+ + I + +
Sbjct: 90 PNIVRLHDSI-----SEEGFHYLVFDLVTGGELFEDIV---AREYYSEADASHCIHQILE 141
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNA---KVADFGLAKQSLEGHSHLTTRVAGTF 436
+ ++H + I HRD+K N+LL S+ K+ADFGLA + ++G AGT
Sbjct: 142 SVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGEQQAWFGFAGTP 197
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GYL+PE + D+++ G+++ L+ G
Sbjct: 198 GYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 21/190 (11%)
Query: 286 RH---GNLVAVKQI--LDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRR 340
RH G VA+K I L+ + EV I+ + H N++ L T K
Sbjct: 35 RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE-----KTL 89
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKST 400
+L+ +Y G + D + ++H R + + K + + Y H + I HRD+K+
Sbjct: 90 YLIMEYASGGEVFDYL-VAHGRMKEKEARSK--FRQIVSAVQYCH---QKRIVHRDLKAE 143
Query: 401 NILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTE--KSDVYSF 458
N+LLD+++N K+ADFG + + G G Y APE G+ + + DV+S
Sbjct: 144 NLLLDADMNIKIADFGFSNEFTVGGK--LDAFCGAPPYAAPEL-FQGKKYDGPEVDVWSL 200
Query: 459 GIVILELMSG 468
G+++ L+SG
Sbjct: 201 GVILYTLVSG 210
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 88
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y+P G + SH R+ +
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRIGR 138
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+L+D + +V DFG AK+ ++G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKG 194
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 R---TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 88
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + N L + D+S ++V +Y P G + SH R+ +
Sbjct: 89 TLNEKRILQAV---NFPFLTKLEFSFKDNSN--LYMVMEYAPGGEM-----FSHLRRIGR 138
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+++D + KV DFG AK+ ++G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKG 194
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKEIEH 87
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y P G + SH R+ +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYAPGGEM-----FSHLRRIGR 137
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+++D + +V DFGLAK+ ++G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKR-VKG 193
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSEL---NAKVADFGLAKQSLEGHSHL 428
++I + +G+ YLH + I H D+K NILL S + K+ DFG++++ GH+
Sbjct: 135 RLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHACE 189
Query: 429 TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
+ GT YLAPE Y +T +D+++ GI+ L+ T TSPF
Sbjct: 190 LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLL-------THTSPF 233
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW + ++ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHFAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+P G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEYSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 88
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + N L + D+S ++V +Y P G + SH R+ +
Sbjct: 89 TLNEKRILQAV---NFPFLTKLEFSFKDNSN--LYMVMEYAPGGEM-----FSHLRRIGR 138
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+++D + KV DFG AK+ ++G
Sbjct: 139 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKG 194
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW + ++ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHFAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+P G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEYSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW + ++ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHFAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+P G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEYSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 88
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y+P G + SH R+ +
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRIGR 138
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
P + + YLH + +RD+K N+L+D + +V DFG AK+ ++G
Sbjct: 139 FXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKG 194
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 87
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y+P G + SH R+ +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRIGR 137
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
P + + YLH + +RD+K N+L+D + +V DFG AK+ ++G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKG 193
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KXQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL-CAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
E+ EV I+ ++ H N+++L D L+ + + G L D ++ +++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDV-----VLILELVSGGELFDFLA---QKES 111
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
L+ + I + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
+G + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 169 IEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 218
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 87
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y+P G + SH R+ +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRIGR 137
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
P + + YLH + +RD+K N+L+D + +V DFG AK+ ++G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKG 193
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 266 FSQNNLIGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRH 319
+ Q IG GA GIV + L G VAVK++ T + E+ ++ + H
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNH 82
Query: 320 RNLLSLRGCCVTSDD-SSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
+N++SL + +LV + M + L I + +++++ ++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSY-----LLYQML 136
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
GI +LH GI HRD+K +NI++ S+ K+ DFGLA+ + + + T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACT--NFMMTPYVVTRYY 191
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSG 468
APE L D++S G ++ EL+ G
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 87
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y P G + SH R+ +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYAPGGEM-----FSHLRRIGR 137
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
P + + YLH + +RD+K N+++D + KV DFG AK+ ++G
Sbjct: 138 FXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKG 193
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
E+ EV I+ ++ H N+++L D L+ + + G L D ++ +++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDV-----VLILELVSGGELFDFLA---QKES 111
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
L+ + I + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
+G + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 169 IEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
E+ EV I+ ++ H N+++L D L+ + + G L D ++ +++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDV-----VLILELVSGGELFDFLA---QKES 111
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
L+ + I + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
+G + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 169 IEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 218
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW ++ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 30 KWESPAQNTAHLDQFERIRTLGTGSFGRVM--LVKHKETGNHYAMK-ILDKQKVVKLKQI 86
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I + L+ L D+S+ ++V +Y P G + SH R+
Sbjct: 87 EHTLNEKRIQQAVNFPFLVKLEFSF--KDNSN---LYMVLEYAPGGEM-----FSHLRRI 136
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + KVADFG AK+ +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-V 192
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 193 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
E+ EV I+ ++ H N+++L D L+ + + G L D ++ +++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDV-----VLILELVSGGELFDFLA---QKES 111
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
L+ + I + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
+G + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 169 IEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
E+ EV I+ ++ H N+++L D L+ + + G L D ++ +++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDV-----VLILELVSGGELFDFLA---QKES 111
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
L+ + I + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
+G + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 169 IEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KXQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL-CAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW ++ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 22 KWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHYAMK-ILDKQKVVKLKQI 78
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+P G + SH R+
Sbjct: 79 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRI 128
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 129 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 184
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 185 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 18/212 (8%)
Query: 263 TNGFSQNNLIGQGASGIVYK-GTLRHGNLVAVKQI--LDLDTKGDEDFTNEVEIISKIRH 319
T+ + +G+GA +V + + G A K I L + + E I ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
N++ L S +LV+D + G L ++I R+ + I + +
Sbjct: 63 PNIVRLHDSI-----SEEGFHYLVFDLVTGGELFEDIV---AREYYSEADASHCIQQILE 114
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNA---KVADFGLAKQSLEGHSHLTTRVAGTF 436
+ + H GI HRD+K N+LL S+ K+ADFGLA + ++G AGT
Sbjct: 115 SVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQQAWFGFAGTP 170
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GYL+PE + D+++ G+++ L+ G
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 18/212 (8%)
Query: 263 TNGFSQNNLIGQGASGIVYK-GTLRHGNLVAVKQI--LDLDTKGDEDFTNEVEIISKIRH 319
T+ + +G+GA +V + + G A K I L + + E I ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 320 RNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
N++ L S +LV+D + G L ++I R+ + I + +
Sbjct: 63 PNIVRLHDSI-----SEEGFHYLVFDLVTGGELFEDIVA---REYYSEADASHCIQQILE 114
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNA---KVADFGLAKQSLEGHSHLTTRVAGTF 436
+ + H GI HRD+K N+LL S+ K+ADFGLA + ++G AGT
Sbjct: 115 SVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQQAWFGFAGTP 170
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GYL+PE + D+++ G+++ L+ G
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 30 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 88
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + N L + D+S ++V +Y P G + SH R+ +
Sbjct: 89 TLNEKRILQAV---NFPFLTKLEFSFKDNSN--LYMVMEYAPGGEM-----FSHLRRIGR 138
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
P + + YLH + +RD+K N+++D + KV DFG AK+ ++G
Sbjct: 139 FXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKG 194
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 195 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
+ + + + L I + +++++ ++ + GI +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYYRAPEVIL 198
Query: 446 YGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
E D++S G ++ E L GR +D
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVCHKILFPGRDYID 232
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW ++ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHYAMK-ILDKQKVVKLKQI 86
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y P G + SH R+
Sbjct: 87 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYAPGGEM-----FSHLRRI 136
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+++D + KV DFG AK+ +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-V 192
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 193 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 10/114 (8%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
KI V + K + +LH L + HRD+K +N+L+++ K+ DFG++ ++ S T
Sbjct: 157 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD--SVAKTI 212
Query: 432 VAGTFGYLAPEYALYGQLTE-----KSDVYSFGIVILELMSGRKVLDTSTSPFQ 480
AG Y+APE + +L + KSD++S GI ++EL R D+ +PFQ
Sbjct: 213 DAGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ 265
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW ++ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHYAMK-ILDKQKVVKLKQI 86
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+P G + SH R+
Sbjct: 87 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRI 136
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 192
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 193 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW ++ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHYAMK-ILDKQKVVKLKQI 86
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+P G + SH R+
Sbjct: 87 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRI 136
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 192
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 193 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 39/255 (15%)
Query: 266 FSQNNL-----IGQGASGIVYKGTL-----RHGNLVAVKQILDLDTKGDED--FTNEVEI 313
F +NNL +G GA G V + T L ++L DE +E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 314 ISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSD------------NISISH 360
+S + +H N+++L G C + G ++ +Y G L + + + SH
Sbjct: 103 MSHLGQHENIVNLLGAC-----THGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
Query: 361 K-RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK 419
+QL+ VA+G+A+L HRD+ + N+LL + AK+ DFGLA+
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 214
Query: 420 QSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSP 478
+ +++ A ++APE T +SDV+S+GI++ E+ S L + P
Sbjct: 215 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYP 270
Query: 479 FQLITDWAWVLAKSG 493
L+ + L K G
Sbjct: 271 GILVNSKFYKLVKDG 285
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW ++ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHYAMK-ILDKQKVVKLKQI 86
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+P G + SH R+
Sbjct: 87 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRI 136
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 192
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 193 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 87
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y P G + SH R+ +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYAPGGEM-----FSHLRRIGR 137
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+++D + +V DFG AK+ ++G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKR-VKG 193
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 107/218 (49%), Gaps = 30/218 (13%)
Query: 269 NNLIGQGASGIVYKGTLRH---GNLVAVKQILDLDTKGDEDF-TNEVEIISKIRHRNLLS 324
++++GQGA+ V++G RH G+L A+K ++ D E E++ K+ H+N++
Sbjct: 14 SDILGQGATANVFRG--RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIV--DVAKGIA 382
L ++++ + + L+ ++ P G+L + P+ + +IV DV G+
Sbjct: 72 L---FAIEEETTTRHKVLIMEFCPCGSLY--TVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 383 YLHYGLKPGIYHRDIKSTNILL----DSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
+L + GI HR+IK NI+ D + K+ DFG A++ LE + + GT Y
Sbjct: 127 HLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE-LEDDEQFVS-LYGTEEY 181
Query: 439 LAP---EYALYGQLTEKS-----DVYSFGIVILELMSG 468
L P E A+ + +K D++S G+ +G
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GXVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 48/200 (24%)
Query: 285 LRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFL 342
L+H N++ +LD+ T EDF+ EV +++ + +L ++ C SD+ +FL
Sbjct: 76 LKHENVIG---LLDVFTPATSIEDFS-EVYLVTTLMGADLNNIVKCQALSDEHV---QFL 128
Query: 343 VYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI 402
VY + +G+ Y+H GI HRD+K +N+
Sbjct: 129 VYQLL-------------------------------RGLKYIHSA---GIIHRDLKPSNV 154
Query: 403 LLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIV 461
++ + ++ DFGLA+Q+ E +T VA T Y APE L + + D++S G +
Sbjct: 155 AVNEDCELRILDFGLARQADE---EMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCI 210
Query: 462 ILELMSGRKVLDTSTSPFQL 481
+ EL+ G+ + S QL
Sbjct: 211 MAELLQGKALFPGSDYIDQL 230
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNLV--AVKQILDLDTKGDEDFTNEVEIISKIRHRNLL 323
++ N IG+G+ G V K ++ G + A K+I + + F E+EI+ + H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
L + D +LV + G L + + HKR +I+ DV +AY
Sbjct: 70 RLYETFEDNTDI-----YLVMELCTGGELFER--VVHKR-VFRESDAARIMKDVLSAVAY 121
Query: 384 LHYGLKPGIYHRDIKSTNILL-----DSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
H K + HRD+K N L DS L K+ DFGLA + G + T+V GT Y
Sbjct: 122 CH---KLNVAHRDLKPENFLFLTDSPDSPL--KLIDFGLAARFKPG-KMMRTKV-GTPYY 174
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSG 468
++P+ L G + D +S G+++ L+ G
Sbjct: 175 VSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW ++ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 50 KWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHYAMK-ILDKQKVVKLKQI 106
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+P G + SH R+
Sbjct: 107 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRI 156
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 157 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 212
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 213 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGNLV--AVKQILDLDTKGDEDFTNEVEIISKIRHRNLL 323
++ N IG+G+ G V K ++ G + A K+I + + F E+EI+ + H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 324 SLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAY 383
L + D +LV + G L + + HKR +I+ DV +AY
Sbjct: 87 RLYETFEDNTDI-----YLVMELCTGGELFER--VVHKR-VFRESDAARIMKDVLSAVAY 138
Query: 384 LHYGLKPGIYHRDIKSTNILL-----DSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
H K + HRD+K N L DS L K+ DFGLA + G + T+V GT Y
Sbjct: 139 CH---KLNVAHRDLKPENFLFLTDSPDSPL--KLIDFGLAARFKPG-KMMRTKV-GTPYY 191
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSG 468
++P+ L G + D +S G+++ L+ G
Sbjct: 192 VSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 133
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + + +T
Sbjct: 134 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMT 187
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 188 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 242
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 243 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 124
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 125 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 178
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 179 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 233
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 234 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 292
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 133
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + + +T
Sbjct: 134 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMT 187
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 188 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 242
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL-CAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 243 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 33/219 (15%)
Query: 269 NNLIGQGASGIVYKG-TLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIR-HRNLLSLR 326
+ L+G+GA V +L++G AVK I EVE + + + ++N+L L
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL- 76
Query: 327 GCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRK--KIIVDVAKGIAYL 384
DD+ R +LV++ + G++ ++H +KQ + +R+ +++ DVA + +L
Sbjct: 77 -IEFFEDDT---RFYLVFEKLQGGSI-----LAHIQKQKHFNEREASRVVRDVAAALDFL 127
Query: 385 HYGLKPGIYHRDIKSTNILLDSELN---AKVADFGLAKQSLEGHS-------HLTTRVAG 434
H GI HRD+K NIL +S K+ DF L +S LTT G
Sbjct: 128 H---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTT-PCG 183
Query: 435 TFGYLAPEY--ALYGQLT---EKSDVYSFGIVILELMSG 468
+ Y+APE Q T ++ D++S G+V+ ++SG
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 133
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + + +T
Sbjct: 134 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMT 187
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 188 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 242
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 243 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 30/218 (13%)
Query: 269 NNLIGQGASGIVYKGTLRH---GNLVAVKQILDLDTKGDEDF-TNEVEIISKIRHRNLLS 324
++++GQGA+ V++G RH G+L A+K ++ D E E++ K+ H+N++
Sbjct: 14 SDILGQGATANVFRG--RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIV--DVAKGIA 382
L ++++ + + L+ ++ P G+L + P+ + +IV DV G+
Sbjct: 72 L---FAIEEETTTRHKVLIMEFCPCGSLY--TVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 383 YLHYGLKPGIYHRDIKSTNILL----DSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
+L + GI HR+IK NI+ D + K+ DFG A++ LE + GT Y
Sbjct: 127 HLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE-LEDDEQFVX-LYGTEEY 181
Query: 439 LAP---EYALYGQLTEKS-----DVYSFGIVILELMSG 468
L P E A+ + +K D++S G+ +G
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 306 DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQL 365
+ E+EI+ K+ H ++ ++ D ++V + M G L D + + + K+
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKRLKEA 114
Query: 366 TWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELN---AKVADFGLAKQSL 422
T K + + YLH + GI HRD+K N+LL S+ K+ DFG +K +
Sbjct: 115 TC---KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--I 166
Query: 423 EGHSHLTTRVAGTFGYLAPEYAL---YGQLTEKSDVYSFGIVILELMSG 468
G + L + GT YLAPE + D +S G+++ +SG
Sbjct: 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 123
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 124 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 177
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 178 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 232
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 233 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 291
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 33/223 (14%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQILDLDTKGDEDFTN------EVEIISKIRHRNL 322
+G GA G V Y LR VAVK++ ++ + + E+ ++ ++H N+
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKL----SRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 323 LSLRGC---CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
+ L + +D S +LV M G +NI K + L+ + ++ + +
Sbjct: 90 IGLLDVFTPATSIEDFS--EVYLVTTLM--GADLNNIV---KSQALSDEHVQFLVYQLLR 142
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYL 439
G+ Y+H GI HRD+K +N+ ++ + ++ DFGLA+Q+ E +T VA T Y
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE---EMTGYVA-TRWYR 195
Query: 440 APEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
APE L + + D++S G ++ EL+ G+ + S QL
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQL 238
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 24/179 (13%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
E+ EV I+ ++ H N+++L D L+ + + G L D ++ +++
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDV-----VLILELVSGGELFDFLA---QKES 111
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI-LLDSEL---NAKVADFGLAKQ 420
L+ + I + G+ YLH I H D+K NI LLD + + K+ DFGLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 421 SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPF 479
+G + GT ++APE Y L ++D++S G++ L+SG SPF
Sbjct: 169 IEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------ASPF 218
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 306 DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQL 365
+ E+EI+ K+ H ++ ++ D ++V + M G L D + + + K+
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKRLKEA 114
Query: 366 TWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELN---AKVADFGLAKQSL 422
T K + + YLH + GI HRD+K N+LL S+ K+ DFG +K +
Sbjct: 115 TC---KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--I 166
Query: 423 EGHSHLTTRVAGTFGYLAPEYAL---YGQLTEKSDVYSFGIVILELMSG 468
G + L + GT YLAPE + D +S G+++ +SG
Sbjct: 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 122
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 123 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 176
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 177 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 231
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 232 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 80 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGCL-----LKYIRKIGSF 129
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 130 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE ++ SD+++ G +I +L++G
Sbjct: 187 KQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 123
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 124 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 177
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 178 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 232
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 233 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 291
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+EI+ K+ H ++ ++ D ++V + M G L D + + + K+ T
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKRLKEATC-- 241
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELN---AKVADFGLAKQSLEGHS 426
K + + YLH + GI HRD+K N+LL S+ K+ DFG +K + G +
Sbjct: 242 -KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGET 295
Query: 427 HLTTRVAGTFGYLAPEYAL---YGQLTEKSDVYSFGIVILELMSG 468
L + GT YLAPE + D +S G+++ +SG
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 306 DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQL 365
+ E+EI+ K+ H ++ ++ D ++V + M G L D + + + K+
Sbjct: 60 NVETEIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKRLKEA 113
Query: 366 TWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELN---AKVADFGLAKQSL 422
T K + + YLH + GI HRD+K N+LL S+ K+ DFG +K +
Sbjct: 114 TC---KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--I 165
Query: 423 EGHSHLTTRVAGTFGYLAPEYAL---YGQLTEKSDVYSFGIVILELMSG 468
G + L + GT YLAPE + D +S G+++ +SG
Sbjct: 166 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 132
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 133 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 186
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 187 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 241
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 242 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 300
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 306 DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQL 365
+ E+EI+ K+ H ++ ++ D ++V + M G L D + + + K+
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKRLKEA 114
Query: 366 TWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELN---AKVADFGLAKQSL 422
T K + + YLH + GI HRD+K N+LL S+ K+ DFG +K +
Sbjct: 115 TC---KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--I 166
Query: 423 EGHSHLTTRVAGTFGYLAPEYAL---YGQLTEKSDVYSFGIVILELMSG 468
G + L + GT YLAPE + D +S G+++ +SG
Sbjct: 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+EI+ K+ H ++ ++ D ++V + M G L D + + + K+ T
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKRLKEATC-- 255
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELN---AKVADFGLAKQSLEGHS 426
K + + YLH + GI HRD+K N+LL S+ K+ DFG +K + G +
Sbjct: 256 -KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGET 309
Query: 427 HLTTRVAGTFGYLAPEYAL---YGQLTEKSDVYSFGIVILELMSG 468
L + GT YLAPE + D +S G+++ +SG
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 122
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 123 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 176
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 177 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 231
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 232 LRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW ++ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 22 KWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKETGNHYAMK-ILDKQKVVKLKQI 78
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+P G + SH R+
Sbjct: 79 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVPGGEM-----FSHLRRI 128
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 129 GRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 184
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 185 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T +AGT YLAPE L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 272 IGQGASGIV---YKGTLRHGNLVAVKQI---LDLDTKGDEDFTNEVEIISKIRHRNLLSL 325
IG GA GIV Y L VA+K++ T + E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
+ + + + L I + +++++ ++ + GI +LH
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 386 YGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
GI HRD+K +NI++ S+ K+ DFGLA+ + G S + T Y APE L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYYRAPEVIL 198
Query: 446 YGQLTEKSDVYSFGIVILE------LMSGRKVLD 473
E D++S G ++ E L GR +D
Sbjct: 199 GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 232
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 131
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 132 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMT 185
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 186 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 240
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 241 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 306 DFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQL 365
+ E+EI+ K+ H ++ ++ D ++V + M G L D + + + K+
Sbjct: 67 NVETEIEILKKLNHPCIIKIKNFFDAED------YYIVLELMEGGELFDKVVGNKRLKEA 120
Query: 366 TWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELN---AKVADFGLAKQSL 422
T K + + YLH + GI HRD+K N+LL S+ K+ DFG +K +
Sbjct: 121 TC---KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--I 172
Query: 423 EGHSHLTTRVAGTFGYLAPEYAL---YGQLTEKSDVYSFGIVILELMSG 468
G + L + GT YLAPE + D +S G+++ +SG
Sbjct: 173 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 131
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 132 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMT 185
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 186 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 240
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 241 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 131
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 132 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 185
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 186 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 240
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 241 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 125
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 126 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 179
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 180 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 234
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 235 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 293
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 138
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 139 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 192
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 193 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 247
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL-CAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 248 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 306
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 146
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 147 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 200
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 201 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 255
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 256 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 314
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 48/200 (24%)
Query: 285 LRHGNLVAVKQILDLDTKGD--EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFL 342
L+H N++ +LD+ T EDF+ EV +++ + +L ++ C SD+ +FL
Sbjct: 84 LKHENVIG---LLDVFTPATSIEDFS-EVYLVTTLMGADLNNIVKCQALSDEHV---QFL 136
Query: 343 VYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNI 402
VY + +G+ Y+H GI HRD+K +N+
Sbjct: 137 VYQLL-------------------------------RGLKYIH---SAGIIHRDLKPSNV 162
Query: 403 LLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIV 461
++ + ++ DFGLA+Q+ E +T VA T Y APE L + + D++S G +
Sbjct: 163 AVNEDSELRILDFGLARQADE---EMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 462 ILELMSGRKVLDTSTSPFQL 481
+ EL+ G+ + S QL
Sbjct: 219 MAELLQGKALFPGSDYIDQL 238
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 145
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 146 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 199
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 200 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 254
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 255 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 313
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 137
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 138 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMT 191
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 192 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 246
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 247 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 305
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 268 QNNLIGQGASGIVYKG-TLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIR-HRNLLSL 325
Q +++G+GA V L AVK I EVE++ + + HRN+L L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
D R +LV++ M G++ +I HKR+ + ++ DVA + +LH
Sbjct: 77 IEFFEEED-----RFYLVFEKMRGGSILSHI---HKRRHFNELEASVVVQDVASALDFLH 128
Query: 386 YGLKPGIYHRDIKSTNILLDSELN---AKVADFGLAKQ-SLEGH-SHLTT----RVAGTF 436
GI HRD+K NIL + K+ DFGL L G S ++T G+
Sbjct: 129 ---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 437 GYLAPE----YALYGQLTEKS-DVYSFGIVILELMSG 468
Y+APE ++ + +K D++S G+++ L+SG
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 128
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 129 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 182
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 183 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 237
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 238 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 296
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 149
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 150 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 203
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 204 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 258
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 259 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 317
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 145
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 146 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 199
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 200 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 254
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 255 LRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 313
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 138
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 139 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 192
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 193 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 247
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL-CAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 248 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 306
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 146
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 147 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 200
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 201 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 255
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL-CAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 256 LRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 314
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 137
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 138 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 191
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 192 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 246
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL-CAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 247 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 305
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 128
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 129 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 182
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 183 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 237
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 238 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 296
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 138
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 139 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 192
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 193 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 247
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL-CAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 248 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 306
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 131
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 132 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 185
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 186 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 240
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 241 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 136
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 137 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 190
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 191 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 245
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 246 LRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 304
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 128
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 129 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 182
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 183 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 237
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 238 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 296
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 80 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 129
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 130 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 33/249 (13%)
Query: 266 FSQNNL-----IGQGASGIVYKGTL-----RHGNLVAVKQILDLDTKGDED--FTNEVEI 313
F +NNL +G GA G V + T L ++L DE +E++I
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 314 ISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR---KQLTWPQ 369
+S + +H N+++L G C + G ++ +Y G L + + + K+ P
Sbjct: 95 MSHLGQHENIVNLLGAC-----THGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 149
Query: 370 RKKIIV----DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH 425
+ ++ VA+G+A+L HRD+ + N+LL + AK+ DFGLA+ +
Sbjct: 150 ELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 206
Query: 426 SHLTTRVAG-TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITD 484
+++ A ++APE T +SDV+S+GI++ E+ S L + P L+
Sbjct: 207 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVNS 262
Query: 485 WAWVLAKSG 493
+ L K G
Sbjct: 263 KFYKLVKDG 271
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 272 IGQGASGIVYKGTLRHGN-LVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCV 330
IG G G+ + N LVAVK I + K DE+ E+ +RH N++ + +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
T + +V +Y G L + I + + + + + + G++Y H
Sbjct: 86 TPTHLA-----IVMEYASGGELFERICNAGR---FSEDEARFFFQQLISGVSYAHAM--- 134
Query: 391 GIYHRDIKSTNILLDSE--LNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
+ HRD+K N LLD K+ADFG +K S+ HS + V GT Y+APE L +
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASV-LHSQPKSAV-GTPAYIAPEVLLKKE 192
Query: 449 LTEK-SDVYSFGIVILELMSGRKVLDTSTSP 478
K +DV+S G+ + ++ G + P
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEP 223
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 132
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 133 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 186
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 187 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 241
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL-CAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 242 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 300
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 133
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 134 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 187
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 188 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 242
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 243 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 83 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 132
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 133 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 189
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 190 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 80 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 129
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 130 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 128
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 129 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDEMT 182
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 183 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 237
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 238 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 296
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 132
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 133 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 186
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 187 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 241
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 242 LRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 300
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 24/242 (9%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 122
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ H
Sbjct: 123 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTD 172
Query: 430 TRVAG---TFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
+AG T Y APE L + + D++S G ++ EL++GR + + QL
Sbjct: 173 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL---- 228
Query: 486 AWVLAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGD 543
+L G + I +E AR ++ + + A+V + P D L KML D
Sbjct: 229 KLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLD 288
Query: 544 ID 545
D
Sbjct: 289 SD 290
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 24/242 (9%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ H
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTD 176
Query: 430 TRVAG---TFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
+AG T Y APE L + + D++S G ++ EL++GR + + QL
Sbjct: 177 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL---- 232
Query: 486 AWVLAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGD 543
+L G + I +E AR ++ + + A+V + P D L KML D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 544 ID 545
D
Sbjct: 293 SD 294
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 81 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 130
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 131 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 188 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 78 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 127
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 128 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 78 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 127
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 128 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 81 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 130
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 131 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 188 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 80 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 129
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 130 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 78 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 127
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 128 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 80 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 129
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 130 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 80 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 129
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 130 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 132
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 133 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDEMT 186
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 187 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 241
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL-CAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 242 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 300
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 24/242 (9%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ H
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTD 176
Query: 430 TRVAG---TFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
+AG T Y APE L + + D++S G ++ EL++GR + + QL
Sbjct: 177 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL---- 232
Query: 486 AWVLAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGD 543
+L G + I +E AR ++ + + A+V + P D L KML D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 544 ID 545
D
Sbjct: 293 SD 294
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 33/249 (13%)
Query: 266 FSQNNL-----IGQGASGIVYKGTL-----RHGNLVAVKQILDLDTKGDED--FTNEVEI 313
F +NNL +G GA G V + T L ++L DE +E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 314 ISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR---KQLTWPQ 369
+S + +H N+++L G C + G ++ +Y G L + + + K+ P
Sbjct: 103 MSHLGQHENIVNLLGAC-----THGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 157
Query: 370 RKKIIV----DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH 425
+ ++ VA+G+A+L HRD+ + N+LL + AK+ DFGLA+ +
Sbjct: 158 ELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 214
Query: 426 SHLTTRVAG-TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITD 484
+++ A ++APE T +SDV+S+GI++ E+ S L + P L+
Sbjct: 215 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVNS 270
Query: 485 WAWVLAKSG 493
+ L K G
Sbjct: 271 KFYKLVKDG 279
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 78 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 127
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 128 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 185 KQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 58 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 107
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 108 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 164
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 165 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K ++ +
Sbjct: 111 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167
Query: 432 VAGTF--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 55 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 104
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 105 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 161
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 162 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 44/244 (18%)
Query: 259 LEQATNGFSQNNLI-----GQGASGIVYKGTLRH------GNLVAVKQILDLDTKGD-ED 306
LE F + NL+ G+G G V K T H VAVK + + + + D
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK----- 361
+E ++ ++ H +++ L G C S L+ +Y G+L + S K
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGAC-----SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 362 --------RKQLTWPQRKKIIV--------DVAKGIAYLHYGLKPGIYHRDIKSTNILLD 405
L P + + + +++G+ YL + + HRD+ + NIL+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 406 SELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQLTEKSDVYSFGIVIL 463
K++DFGL++ E S++ R G ++A E T +SDV+SFG+++
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSYV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW 243
Query: 464 ELMS 467
E+++
Sbjct: 244 EIVT 247
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K ++ +
Sbjct: 131 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 432 VAGTF--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K ++ +
Sbjct: 131 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 432 VAGTF--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K ++ +
Sbjct: 115 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 171
Query: 432 VAGTF--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 172 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K ++ +
Sbjct: 109 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 165
Query: 432 VAGTF--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 166 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 57 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 106
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 107 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 163
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 164 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 56 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 105
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 106 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 163 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 62 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 111
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 112 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 168
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 169 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K ++ +
Sbjct: 121 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 177
Query: 432 VAGTF--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 178 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 77 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 126
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 127 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 183
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 184 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K ++ +
Sbjct: 129 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 185
Query: 432 VAGTF--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 186 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYALYG-QLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 308 TNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
T E +++S++ H + L DD ++ + Y NG L + + RK ++
Sbjct: 77 TRERDVMSRLDHPFFVKL--YFTFQDD---EKLYFGLSYAKNGEL-----LKYIRKIGSF 126
Query: 368 PQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK-QSLEG 424
+ + ++ + YLH GI HRD+K NILL+ +++ ++ DFG AK S E
Sbjct: 127 DETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 183
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y++PE + SD+++ G +I +L++G
Sbjct: 184 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K +LT
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCAKLTDDH 122
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 123 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 176
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 177 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 231
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 232 LRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 28/186 (15%)
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTL---SDNISISHK 361
+DF NE++II+ I++ L+ G D+ +++Y+YM N ++ + + K
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEV-----YIIYEYMENDSILKFDEYFFVLDK 142
Query: 362 RKQLTWPQR--KKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK 419
P + K II V +Y+H + I HRD+K +NIL+D K++DFG ++
Sbjct: 143 NYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESE 200
Query: 420 QSLEGHSHLTTRVAGTFGYLAPEY----ALYGQLTEKSDVYSFGIVILELMSGRKVLDTS 475
++ GT+ ++ PE+ + Y K D++S GI + V+ +
Sbjct: 201 YMVDKK---IKGSRGTYEFMPPEFFSNESSYN--GAKVDIWSLGICLY-------VMFYN 248
Query: 476 TSPFQL 481
PF L
Sbjct: 249 VVPFSL 254
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 17/123 (13%)
Query: 373 IIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLA---KQSLEGHSHLT 429
I + +A+ + +LH G+ HRD+K +NI + KV DFGL Q E + LT
Sbjct: 169 IFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 430 TRVA--------GTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
A GT Y++PE + K D++S G+++ EL+ T ++
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQMERVRI 282
Query: 482 ITD 484
ITD
Sbjct: 283 ITD 285
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KSQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGL + + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K ++ +
Sbjct: 473 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529
Query: 432 VAGTF--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 269 NNLIGQGASGIVYKG--TLRHGNLVAV-----KQILDLDTKGDEDFTNEVEIISKIRHRN 321
N ++G+G G VY+G T G + V K+ LD K E F +E I+ + H +
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPH 86
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
++ L G + ++ + +++ + P G L + + L + + K +
Sbjct: 87 IVKLIG--IIEEEPT----WIIMELYPYGELGH--YLERNKNSLKVLTLVLYSLQICKAM 138
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
AYL HRDI NIL+ S K+ DFGL++ + + + +++P
Sbjct: 139 AYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 195
Query: 442 EYALYGQLTEKSDVYSFGIVILELMS 467
E + + T SDV+ F + + E++S
Sbjct: 196 ESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 27/248 (10%)
Query: 266 FSQNNL-----IGQGASGIVYKGTL-----RHGNLVAVKQILDLDTKGDED--FTNEVEI 313
F +NNL +G GA G V + T L ++L DE +E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 314 ISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPN------GTLSDNISISHKRKQLT 366
+S + +H N+++L G C + Y + N L + + + L+
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 367 WPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHS 426
VA+G+A+L HRD+ + N+LL + AK+ DFGLA+ + +
Sbjct: 163 TRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 427 HLTTRVAG-TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDW 485
++ A ++APE T +SDV+S+GI++ E+ S L + P L+
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVNSK 275
Query: 486 AWVLAKSG 493
+ L K G
Sbjct: 276 FYKLVKDG 283
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K ++ +
Sbjct: 474 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 530
Query: 432 VAGTF--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 531 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ D+GLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 20/240 (8%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 149
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS-LEGHSHL 428
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + E ++
Sbjct: 150 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV 206
Query: 429 TTRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAW 487
TR Y APE L + + D++S G ++ EL++GR + + QL
Sbjct: 207 ATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KL 257
Query: 488 VLAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
+L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 258 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 317
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 269 NNLIGQGASGIVYKG--TLRHGNLVAV-----KQILDLDTKGDEDFTNEVEIISKIRHRN 321
N ++G+G G VY+G T G + V K+ LD K E F +E I+ + H +
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPH 70
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
++ L G + ++ + +++ + P G L + + L + + K +
Sbjct: 71 IVKLIG--IIEEEPT----WIIMELYPYGELGH--YLERNKNSLKVLTLVLYSLQICKAM 122
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
AYL HRDI NIL+ S K+ DFGL++ + + + +++P
Sbjct: 123 AYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 179
Query: 442 EYALYGQLTEKSDVYSFGIVILELMS 467
E + + T SDV+ F + + E++S
Sbjct: 180 ESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 269 NNLIGQGASGIVYKG--TLRHGNLVAV-----KQILDLDTKGDEDFTNEVEIISKIRHRN 321
N ++G+G G VY+G T G + V K+ LD K E F +E I+ + H +
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPH 74
Query: 322 LLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
++ L G + ++ + +++ + P G L + + L + + K +
Sbjct: 75 IVKLIG--IIEEEPT----WIIMELYPYGELGH--YLERNKNSLKVLTLVLYSLQICKAM 126
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAP 441
AYL HRDI NIL+ S K+ DFGL++ + + + +++P
Sbjct: 127 AYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 183
Query: 442 EYALYGQLTEKSDVYSFGIVILELMS 467
E + + T SDV+ F + + E++S
Sbjct: 184 ESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 25/224 (11%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILD----LDTKGDED 306
KW + ++ + F + +G G+ G ++ + GN A+K ILD + K E
Sbjct: 29 KWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEH 87
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK--Q 364
NE I+ + L+ L D+S+ ++V +Y+ G + SH R+ +
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRIGR 137
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEG 424
+ P + + YLH + +RD+K N+L+D + +V DFG AK+ ++G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKG 193
Query: 425 HSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 374 IVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVA 433
+ +++ + +LH + GI +RD+K NI+L+ + + K+ DFGL K+S+ + +T
Sbjct: 127 LAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFC 182
Query: 434 GTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y+APE + D +S G ++ ++++G
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 16 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 72
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 73 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 122
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 123 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKR-V 178
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 179 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 44/244 (18%)
Query: 259 LEQATNGFSQNNLI-----GQGASGIVYKGTLRH------GNLVAVKQILDLDTKGD-ED 306
LE F + NL+ G+G G V K T H VAVK + + + + D
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK----- 361
+E ++ ++ H +++ L G C S L+ +Y G+L + S K
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGAC-----SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 362 --------RKQLTWPQRKKIIV--------DVAKGIAYLHYGLKPGIYHRDIKSTNILLD 405
L P + + + +++G+ YL + + HRD+ + NIL+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVA 184
Query: 406 SELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQLTEKSDVYSFGIVIL 463
K++DFGL++ E S + R G ++A E T +SDV+SFG+++
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW 243
Query: 464 ELMS 467
E+++
Sbjct: 244 EIVT 247
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 374 IVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVA 433
+ +++ + +LH + GI +RD+K NI+L+ + + K+ DFGL K+S+ + +T
Sbjct: 127 LAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFC 182
Query: 434 GTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT Y+APE + D +S G ++ ++++G
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 146
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +
Sbjct: 147 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMX 200
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 201 GXVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 255
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL-CAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 256 LRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 314
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 30 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 86
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 87 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 136
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 192
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 193 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 10/114 (8%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
KI V + K + +LH L + HRD+K +N+L+++ K+ DFG++ ++ +
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID- 169
Query: 432 VAGTFGYLAPEYALYGQLTE-----KSDVYSFGIVILELMSGRKVLDTSTSPFQ 480
AG Y+APE + +L + KSD++S GI ++EL R D+ +PFQ
Sbjct: 170 -AGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ 221
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
+++ V+ G+ YL + HRD+ + N+LL ++ AK++DFGL+K + +
Sbjct: 115 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ 171
Query: 432 VAGTF--GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
G + + APE Y + + KSDV+SFG+++ E S
Sbjct: 172 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 43/256 (16%)
Query: 266 FSQNNL-----IGQGASGIVYKGTL-----RHGNLVAVKQILDLDTKGDED--FTNEVEI 313
F +NNL +G GA G V + T L ++L DE +E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 314 ISKI-RHRNLLSLRG--------------CCVTSDDSSGKRRFLVYDYMPNGTLSDNISI 358
+S + +H N+++L G CC + +R+ V + P +++ S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN--ST 160
Query: 359 SHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLA 418
+ R L + + VA+G+A+L HRD+ + N+LL + AK+ DFGLA
Sbjct: 161 ASTRDLLHFSSQ------VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 419 KQSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTSTS 477
+ + +++ A ++APE T +SDV+S+GI++ E+ S L +
Sbjct: 212 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPY 267
Query: 478 PFQLITDWAWVLAKSG 493
P L+ + L K G
Sbjct: 268 PGILVNSKFYKLVKDG 283
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 112/263 (42%), Gaps = 44/263 (16%)
Query: 235 EQFVSNLQASVLPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLR-HGNLVAV 293
+Q S+ + +P + W Q + + +LIG G+ G V + + +VA+
Sbjct: 31 KQHHSSKPTASMPRPHSDW-------QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAI 83
Query: 294 KQILDL--DTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGT 351
K+IL + D + E+ I++++ H +++ + + D ++V +
Sbjct: 84 KKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD--- 140
Query: 352 LSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAK 411
SD + LT K ++ ++ G+ Y+H GI HRD+K N L++ + + K
Sbjct: 141 -SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVK 196
Query: 412 VADFGLAKQ-----------------------SLEGHSHLTTRVAG---TFGYLAPEYAL 445
V DFGLA+ + +L ++ G T Y APE L
Sbjct: 197 VCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL 256
Query: 446 YGQ-LTEKSDVYSFGIVILELMS 467
+ TE DV+S G + EL++
Sbjct: 257 LQENYTEAIDVWSIGCIFAELLN 279
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 44/244 (18%)
Query: 259 LEQATNGFSQNNLI-----GQGASGIVYKGTLRH------GNLVAVKQILDLDTKGD-ED 306
LE F + NL+ G+G G V K T H VAVK + + + + D
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 307 FTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHK----- 361
+E ++ ++ H +++ L G C S L+ +Y G+L + S K
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGAC-----SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 362 --------RKQLTWPQRKKIIV--------DVAKGIAYLHYGLKPGIYHRDIKSTNILLD 405
L P + + + +++G+ YL + + HRD+ + NIL+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVA 184
Query: 406 SELNAKVADFGLAKQSLEGHSHLTTRVAGTF--GYLAPEYALYGQLTEKSDVYSFGIVIL 463
K++DFGL++ E S + R G ++A E T +SDV+SFG+++
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW 243
Query: 464 ELMS 467
E+++
Sbjct: 244 EIVT 247
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L + D+S ++V +Y+ G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLE---FSFKDNSN--LYMVMEYVAGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFAEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKG--DEDFTNEVEIISKIRHRNLLSLRGCC 329
+G GA G V+ R L V + ++ D E E+E++ + H N++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 330 VTSDDSSGKRRFLVYDYMPNGTLSDNISISHKR-KQLTWPQRKKIIVDVAKGIAYLHYGL 388
++V + G L + I + R K L+ +++ + +AY H
Sbjct: 90 -----EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH--- 141
Query: 389 KPGIYHRDIKSTNILL-DSELNA--KVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
+ H+D+K NIL D+ ++ K+ DFGLA + + H +T AGT Y+APE
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA-ELFKSDEH-STNAAGTALYMAPE-VF 198
Query: 446 YGQLTEKSDVYSFGIVILELMSG 468
+T K D++S G+V+ L++G
Sbjct: 199 KRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKST 400
FLV + + G L + I K+K + + I+ + ++++H G+ HRD+K
Sbjct: 82 FLVMELLNGGELFERIK---KKKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPE 135
Query: 401 NILLDSE---LNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYS 457
N+L E L K+ DFG A+ + L T T Y APE E D++S
Sbjct: 136 NLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDESCDLWS 194
Query: 458 FGIVILELMSGR 469
G+++ ++SG+
Sbjct: 195 LGVILYTMLSGQ 206
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 40/217 (18%)
Query: 272 IGQGASGIVYKGT-LRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLR---- 326
+G GA G V R G VA+K++ F +E I +K +R LL L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL-------SRPFQSE--IFAKRAYRELLLLKHMQH 82
Query: 327 ----GCCVTSDDSSGKRRFLVYDY---MP--NGTLSDNISISHKRKQLTWPQRKKIIVDV 377
G +S R F YD+ MP L + + +++ + ++ +
Sbjct: 83 ENVIGLLDVFTPASSLRNF--YDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQM 135
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS-LEGHSHLTTRVAGTF 436
KG+ Y+H G+ HRD+K N+ ++ + K+ DFGLA+ + E ++ TR
Sbjct: 136 LKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR----- 187
Query: 437 GYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVL 472
Y APE L + + D++S G ++ E+++G+ +
Sbjct: 188 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 224
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 40/217 (18%)
Query: 272 IGQGASGIVYKGT-LRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLR---- 326
+G GA G V R G VA+K++ F +E I +K +R LL L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL-------SRPFQSE--IFAKRAYRELLLLKHMQH 100
Query: 327 ----GCCVTSDDSSGKRRFLVYDY---MP--NGTLSDNISISHKRKQLTWPQRKKIIVDV 377
G +S R F YD+ MP L + + +++ + ++ +
Sbjct: 101 ENVIGLLDVFTPASSLRNF--YDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQM 153
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS-LEGHSHLTTRVAGTF 436
KG+ Y+H G+ HRD+K N+ ++ + K+ DFGLA+ + E ++ TR
Sbjct: 154 LKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR----- 205
Query: 437 GYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVL 472
Y APE L + + D++S G ++ E+++G+ +
Sbjct: 206 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 242
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 24 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 80
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 81 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 130
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 131 GRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 186
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 187 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 50 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 106
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 107 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 156
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 157 GRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 212
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 213 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 22/211 (10%)
Query: 266 FSQNNLI---GQGASGIVYKGTLRHGNLVAVK--QILDLDTKGDEDFTNEVEIISKIRHR 320
F Q N + + SG ++KG + GN + VK ++ D T+ DF E + H
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRK--KIIVDVA 378
N+L + G C + L+ + P G+L ++ H+ Q + K +D A
Sbjct: 68 NVLPVLGACQS---PPAPHPTLITHWXPYGSL---YNVLHEGTNFVVDQSQAVKFALDXA 121
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKV--ADFGLAKQSLEGHSHLTTRVAGTF 436
+G A+LH L+P I + S ++ +D + A++ AD + QS G + VA
Sbjct: 122 RGXAFLH-TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQS-PGRXYAPAWVAPEA 179
Query: 437 GYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
PE +D +SF +++ EL++
Sbjct: 180 LQKKPE----DTNRRSADXWSFAVLLWELVT 206
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 50 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 106
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 107 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 156
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 157 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 212
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 213 KG---ATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 272 IGQGASGIVYKGTLRHGN-LVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCV 330
IG G G+ + N LVAVK I + K DE+ E+ +RH N++ + +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
T + +V +Y G L + I + + + + + G++Y H
Sbjct: 85 TPTHLA-----IVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVSYCH---AM 133
Query: 391 GIYHRDIKSTNILLDSE--LNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
+ HRD+K N LLD K+ DFG +K S+ HS + V GT Y+APE L +
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV-LHSQPKSTV-GTPAYIAPEVLLKKE 191
Query: 449 LTEK-SDVYSFGIVILELMSGRKVLDTSTSP 478
K +DV+S G+ + ++ G + P
Sbjct: 192 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEP 222
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 266 FSQNNLIGQGASGIVYKGTLRHGN----LVAVKQI-LDLDTKGD-EDFTNEVEIISKIRH 319
F+ ++G+G G V + L+ + VAVK + D+ D E+F E + + H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 320 RNLLSLRGCCVTSDDSSGKRRF----LVYDYMPNGTLSDNI---SISHKRKQLTWPQRKK 372
++ L G S S K R ++ +M +G L + I L +
Sbjct: 85 PHVAKLVG---VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 373 IIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRV 432
+VD+A G+ YL HRD+ + N +L ++ VADFGL+++ G +
Sbjct: 142 FMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCA 198
Query: 433 AGT-FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
+ +LA E T SDV++FG+ + E+M+
Sbjct: 199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 27/217 (12%)
Query: 268 QNNLIGQGASGIVYKG-TLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIR-HRNLLSL 325
Q +++G+GA V L AVK I EVE++ + + HRN+L L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 326 RGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLH 385
D R +LV++ M G++ +I HKR+ + ++ DVA + +LH
Sbjct: 77 IEFFEEED-----RFYLVFEKMRGGSILSHI---HKRRHFNELEASVVVQDVASALDFLH 128
Query: 386 YGLKPGIYHRDIKSTNILLDSELN---AKVADFGLAKQ-SLEGH-SHLTT----RVAGTF 436
GI HRD+K NIL + K+ DF L L G S ++T G+
Sbjct: 129 ---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 437 GYLAPE----YALYGQLTEKS-DVYSFGIVILELMSG 468
Y+APE ++ + +K D++S G+++ L+SG
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 155
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DFGLA+ + +T
Sbjct: 156 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMT 209
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVL 472
VA T Y APE L + D++S G ++ EL++GR +
Sbjct: 210 GYVA-TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ FGLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 110/258 (42%), Gaps = 41/258 (15%)
Query: 259 LEQATNGFSQNNLIGQGASGIVYK-GTLRHGNLVAVKQILDLDTKGDEDFTN-EVEIISK 316
LE ++ +S +G G+ GIV + + G A+K++L D + N E++I+
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQ-----DPRYKNRELDIMKV 56
Query: 317 IRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVD 376
+ H N++ L T+ D K D+ G ++ ++ HK + Q K + V
Sbjct: 57 LDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVI 116
Query: 377 VAKGIAYLHYGLKP------------------------------GIYHRDIKSTNILLDS 406
+ LH LK GI HRDIK N+L++S
Sbjct: 117 MEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS 176
Query: 407 ELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYG-QLTEKSDVYSFGIVILE 464
+ N K+ DFG AK+ + + + F Y APE L + T D++S G V E
Sbjct: 177 KDNTLKLCDFGSAKKLIPSEPSVAX-ICSRF-YRAPELMLGATEYTPSIDLWSIGCVFGE 234
Query: 465 LMSGRKVLDTSTSPFQLI 482
L+ G+ + TS QL+
Sbjct: 235 LILGKPLFSGETSIDQLV 252
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE L + D ++ G++I ++ +G
Sbjct: 192 KGR---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 36/215 (16%)
Query: 272 IGQGASGIVYKGTLRHGN-LVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHRNLLSLRGC 328
IG+G G V+K R + +VA+K++ LD D +G E+ ++ +++H+N++ L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 329 CVTSDDSSGKRRFLVYDYMP----------NGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
S K+ LV+++ NG L I K + +
Sbjct: 70 L-----HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV-------------KSFLFQLL 111
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
KG+ + H + HRD+K N+L++ K+ADFGLA+ + V T Y
Sbjct: 112 KGLGFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWY 167
Query: 439 LAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
P+ +L S D++S G + EL + + L
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ DF LA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL-CAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ D GLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 23/222 (10%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLL 323
N FS + +IG+G G VY R + + + LD K + E +++ +L+
Sbjct: 189 NDFSVHRIIGRGGFGEVY--GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 324 SLRGC----CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
S C C++ + + + D M G L ++S + + + ++
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEADMRFYAAEIIL 303
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYL 439
G+ ++H + +RD+K NILLD + +++D GLA + H + GT GY+
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 440 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQ 480
APE G + S D +S G ++ +L+ G SPF+
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGH-------SPFR 392
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 23/222 (10%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLL 323
N FS + +IG+G G VY R + + + LD K + E +++ +L+
Sbjct: 189 NDFSVHRIIGRGGFGEVY--GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 324 SLRGC----CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
S C C++ + + + D M G L ++S + + + ++
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEADMRFYAAEIIL 303
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYL 439
G+ ++H + +RD+K NILLD + +++D GLA + H + GT GY+
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 440 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQ 480
APE G + S D +S G ++ +L+ G SPF+
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGH-------SPFR 392
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 14/105 (13%)
Query: 373 IIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLA---KQSLEGHSHLT 429
I + +A+ + +LH G+ HRD+K +NI + KV DFGL Q E + LT
Sbjct: 123 IFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 430 --------TRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELM 466
T GT Y++PE + K D++S G+++ EL+
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 23/222 (10%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLL 323
N FS + +IG+G G VY R + + + LD K + E +++ +L+
Sbjct: 189 NDFSVHRIIGRGGFGEVY--GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 324 SLRGC----CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
S C C++ + + + D M G L ++S + + + ++
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEADMRFYAAEIIL 303
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYL 439
G+ ++H + +RD+K NILLD + +++D GLA + H + GT GY+
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 440 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQ 480
APE G + S D +S G ++ +L+ G SPF+
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGH-------SPFR 392
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ D GLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+++D + +V DFG AK+ +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAPE + + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 49/255 (19%)
Query: 242 QASVLPNSGAKW-FHVSELEQAT----NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQI 296
A LP +KW F L+ F Q +I A GI T R VAVK +
Sbjct: 2 HAERLPYDASKWEFPRDRLKLGKPLGRGAFGQ--VIEADAFGIDKTATCR---TVAVKML 56
Query: 297 LDLDTKGDED-FTNEVEIISKIRHR-NLLSLRGCC------------------VTSDDSS 336
+ T + +E++I+ I H N+++L G C +++ S
Sbjct: 57 KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRS 116
Query: 337 GKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKGIAYLHYGLKPGIY 393
+ F+ Y P D +++ H +I VAKG+ +L
Sbjct: 117 KRNEFVPYKVAPEDLYKDFLTLEH------------LICYSFQVAKGMEFL---ASRKCI 161
Query: 394 HRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEK 452
HRD+ + NILL + K+ DFGLA+ + ++ A ++APE T +
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 453 SDVYSFGIVILELMS 467
SDV+SFG+++ E+ S
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 23/222 (10%)
Query: 264 NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLL 323
N FS + +IG+G G VY R + + + LD K + E +++ +L+
Sbjct: 188 NDFSVHRIIGRGGFGEVY--GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 245
Query: 324 SLRGC----CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAK 379
S C C++ + + + D M G L ++S + + + ++
Sbjct: 246 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEADMRFYAAEIIL 302
Query: 380 GIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYL 439
G+ ++H + +RD+K NILLD + +++D GLA + H + GT GY+
Sbjct: 303 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 356
Query: 440 APEYALYGQLTEKS-DVYSFGIVILELMSGRKVLDTSTSPFQ 480
APE G + S D +S G ++ +L+ G SPF+
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGH-------SPFR 391
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E+ ++ ++H N++ L + + ++ L++ + K ++LT
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
+ +I + +G+ Y+H I HRD+K +N+ ++ + K+ D GLA+ + +T
Sbjct: 127 VQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHT---DDEMT 180
Query: 430 TRVAGTFGYLAPEYAL-YGQLTEKSDVYSFGIVILELMSGRKVLDTSTSPFQLITDWAWV 488
VA T Y APE L + + D++S G ++ EL++GR + + QL +
Sbjct: 181 GYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL----KLI 235
Query: 489 LAKSGKVDDIFDEFIRAEGARAVMERFV-LVGILCAHVMVALRPTITDAL-KMLEGDID 545
L G + I +E AR ++ + + A+V + P D L KML D D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 110/257 (42%), Gaps = 36/257 (14%)
Query: 266 FSQNNL-----IGQGASGIVYKGTL-----RHGNLVAVKQILDLDTKGDED--FTNEVEI 313
F +NNL +G GA G V + T L ++L DE +E++I
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 314 ISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPN-------GTLSDNISISHKRKQL 365
+S + +H N+++L G C + Y + N L +++ + L
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL 147
Query: 366 TWPQRKKIIV--------DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGL 417
+ + + VA+G+A+L HRD+ + N+LL + AK+ DFGL
Sbjct: 148 DKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 418 AKQSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTST 476
A+ + +++ A ++APE T +SDV+S+GI++ E+ S L +
Sbjct: 205 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNP 260
Query: 477 SPFQLITDWAWVLAKSG 493
P L+ + L K G
Sbjct: 261 YPGILVNSKFYKLVKDG 277
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 21/210 (10%)
Query: 270 NLIGQGASGIVYKGTLRH-GNLVAVKQILDL----DTKG--DEDFTNEVEIISKIRHRNL 322
+IG+GA +V + R G AVK I+D+ + G ED E I ++H ++
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 323 LSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI- 381
+ L SS ++V+++M L I KR + + + + I
Sbjct: 89 VEL-----LETYSSDGMLYMVFEFMDGADLCFEIV---KRADAGFVYSEAVASHYMRQIL 140
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNA---KVADFGLAKQSLEGHSHLTTRVAGTFGY 438
L Y I HRD+K N+LL S+ N+ K+ DFG+A Q E RV GT +
Sbjct: 141 EALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHF 199
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+APE + DV+ G+++ L+SG
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT YLAP L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 257 SELEQATNGFSQNNL-IGQGASGIVYKGTLRHGNLVAVKQILDLDTKG-DEDFTNEVEII 314
SE E+ + F +G+G G VYK + G + ++ G E+ ++
Sbjct: 13 SERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALL 72
Query: 315 SKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLS----DNISISHKRK-QLTWPQ 369
+++H N++SL+ ++ D ++ +L++DY + S ++K+ QL
Sbjct: 73 RELKHPNVISLQKVFLSHAD---RKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGM 129
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSE----LNAKVADFGLAK---QSL 422
K ++ + GI YLH + HRD+K NIL+ E K+AD G A+ L
Sbjct: 130 VKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL 186
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQ-LTEKSDVYSFGIVILELMSGRKVL 472
+ + L V TF Y APE L + T+ D+++ G + EL++ +
Sbjct: 187 KPLADLDP-VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 101/215 (46%), Gaps = 22/215 (10%)
Query: 272 IGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSL----- 325
+G G +G+V+ VA+K+I+ D + + E++II ++ H N++ +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 326 -RGCCVTSDDSSGKRR---FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI 381
G +T D S ++V +YM +++ ++ L + + + +G+
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-----ETDLANVLEQGPLLEEHARLFMYQLLRGL 133
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSE-LNAKVADFGLAKQSLEGHSHLTTRVAG--TFGY 438
Y+H + HRD+K N+ +++E L K+ DFGLA+ +SH G T Y
Sbjct: 134 KYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWY 190
Query: 439 LAPEYALY-GQLTEKSDVYSFGIVILELMSGRKVL 472
+P L T+ D+++ G + E+++G+ +
Sbjct: 191 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 26/150 (17%)
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQR--KKIIVDVAKGIAYLHY 386
C DD K ++V +YMP G L + +S P++ K +V + +H
Sbjct: 142 CAFQDD---KYLYMVMEYMPGGDLVNLMS------NYDVPEKWAKFYTAEVVLALDAIH- 191
Query: 387 GLKPGIYHRDIKSTNILLDSELNAKVADFGL-AKQSLEGHSHLTTRVAGTFGYLAPEY-- 443
G+ HRD+K N+LLD + K+ADFG K G H T V GT Y++PE
Sbjct: 192 --SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLK 248
Query: 444 -----ALYGQLTEKSDVYSFGIVILELMSG 468
YG+ + D +S G+ + E++ G
Sbjct: 249 SQGGDGYYGR---ECDWWSVGVFLFEMLVG 275
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 49/251 (19%)
Query: 246 LPNSGAKW-FHVSELEQAT----NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLD 300
LP +KW F L+ F Q +I A GI T R VAVK + +
Sbjct: 15 LPYDASKWEFPRDRLKLGKPLGRGAFGQ--VIEADAFGIDKTATCR---TVAVKMLKEGA 69
Query: 301 TKGDED-FTNEVEIISKI-RHRNLLSLRGCC------------------VTSDDSSGKRR 340
T + +E++I+ I H N+++L G C +++ S +
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKGIAYLHYGLKPGIYHRDI 397
F+ Y P D +++ H +I VAKG+ +L HRD+
Sbjct: 130 FVPYKVAPEDLYKDFLTLEH------------LICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 398 KSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEKSDVY 456
+ NILL + K+ DFGLA+ + ++ A ++APE T +SDV+
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 457 SFGIVILELMS 467
SFG+++ E+ S
Sbjct: 235 SFGVLLWEIFS 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 49/251 (19%)
Query: 246 LPNSGAKW-FHVSELEQAT----NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLD 300
LP +KW F L+ F Q +I A GI T R VAVK + +
Sbjct: 6 LPYDASKWEFPRDRLKLGKPLGRGAFGQ--VIEADAFGIDKTATCR---TVAVKMLKEGA 60
Query: 301 TKGDED-FTNEVEIISKI-RHRNLLSLRGCC------------------VTSDDSSGKRR 340
T + +E++I+ I H N+++L G C +++ S +
Sbjct: 61 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNE 120
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKGIAYLHYGLKPGIYHRDI 397
F+ Y P D +++ H +I VAKG+ +L HRD+
Sbjct: 121 FVPYKVAPEDLYKDFLTLEH------------LICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 398 KSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEKSDVY 456
+ NILL + K+ DFGLA+ + ++ A ++APE T +SDV+
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 225
Query: 457 SFGIVILELMS 467
SFG+++ E+ S
Sbjct: 226 SFGVLLWEIFS 236
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 261 QATNGFSQNNLIGQGASGIVYKGTLRH-GNLVAVKQILDLDTKGDEDFTN-EVEIISKI- 317
+ + F + GQG G V G + G VA+K+++ D F N E++I+ +
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ-----DPRFRNRELQIMQDLA 74
Query: 318 --RHRNLLSLRGCCVTSDDSSGKRRFL--VYDYMPNGTLSDNISISHKRKQLTWPQR--K 371
H N++ L+ T + + +L V +Y+P+ TL ++ R+Q+ P K
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLH-RCCRNYYRRQVAPPPILIK 132
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILL-DSELNAKVADFGLAKQ---SLEGHSH 427
+ + + I LH + HRDIK N+L+ +++ K+ DFG AK+ S ++
Sbjct: 133 VFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY 191
Query: 428 LTTRVAGTFGYLAPEYALYGQ-LTEKSDVYSFGIVILELMSGRKVLDTSTSPFQL 481
+ +R Y APE Q T D++S G + E+M G + S QL
Sbjct: 192 ICSRY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQL 241
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
KI V + K + +LH L + HRD+K +N+L+++ K DFG++ ++ +
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID- 196
Query: 432 VAGTFGYLAPEYALYGQLTE-----KSDVYSFGIVILELMSGRKVLDTSTSPFQ 480
AG Y APE + +L + KSD++S GI +EL R D+ +PFQ
Sbjct: 197 -AGCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQ 248
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 105/255 (41%), Gaps = 49/255 (19%)
Query: 242 QASVLPNSGAKW-FHVSELEQAT----NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQI 296
A LP +KW F L+ F Q +I A GI T R VAVK +
Sbjct: 2 HAERLPYDASKWEFPRDRLKLGKPLGRGAFGQ--VIEADAFGIDKTATCR---TVAVKML 56
Query: 297 LDLDTKGDED-FTNEVEIISKIRHR-NLLSLRGCC------------------VTSDDSS 336
+ T + +E++I+ I H N+++L G C +++ S
Sbjct: 57 KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRS 116
Query: 337 GKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKGIAYLHYGLKPGIY 393
+ F+ Y P D +++ H +I VAKG+ +L
Sbjct: 117 KRNEFVPYKVAPEDLYKDFLTLEH------------LICYSFQVAKGMEFL---ASRKCI 161
Query: 394 HRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEK 452
HRD+ + NILL + K+ DFGLA+ + + A ++APE T +
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 453 SDVYSFGIVILELMS 467
SDV+SFG+++ E+ S
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 105/255 (41%), Gaps = 49/255 (19%)
Query: 242 QASVLPNSGAKW-FHVSELEQAT----NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQI 296
A LP +KW F L+ F Q +I A GI T R VAVK +
Sbjct: 2 HAERLPYDASKWEFPRDRLKLGKPLGRGAFGQ--VIEADAFGIDKTATCR---TVAVKML 56
Query: 297 LDLDTKGDED-FTNEVEIISKIRHR-NLLSLRGCC------------------VTSDDSS 336
+ T + +E++I+ I H N+++L G C +++ S
Sbjct: 57 KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 116
Query: 337 GKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKGIAYLHYGLKPGIY 393
+ F+ Y P D +++ H +I VAKG+ +L
Sbjct: 117 KRNEFVPYKVAPEDLYKDFLTLEH------------LICYSFQVAKGMEFL---ASRKCI 161
Query: 394 HRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEK 452
HRD+ + NILL + K+ DFGLA+ + + A ++APE T +
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 453 SDVYSFGIVILELMS 467
SDV+SFG+++ E+ S
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 132/321 (41%), Gaps = 60/321 (18%)
Query: 246 LPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKG---------TLRHGNLVAVKQI 296
LP +KW E + + +G+GA G V + T R VAVK +
Sbjct: 15 LPYDASKW------EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXR---TVAVKML 65
Query: 297 LDLDTKGDED-FTNEVEIISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSD 354
+ T + +E++I+ I H N+++L G C G ++ ++ G LS
Sbjct: 66 KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT----KPGGPLMVIVEFCKFGNLST 121
Query: 355 ------NISISHK---RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLD 405
N + +K + LT VAKG+ +L HRD+ + NILL
Sbjct: 122 YLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLS 178
Query: 406 SELNAKVADFGLAKQSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEKSDVYSFGIVILE 464
+ K+ DFGLA+ + ++ A ++APE T +SDV+SFG+++ E
Sbjct: 179 EKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 238
Query: 465 LMSGRKVLDTSTSPFQLITDWAWVLAKSGKVDDIFDEFIRAEGARAVMERFVLVGIL--- 521
+ S SP+ + K+D+ F ++ EG R + +
Sbjct: 239 IFS------LGASPYPGV-----------KIDEEFXRRLK-EGTRMRAPDYTTPEMYQTM 280
Query: 522 --CAHVMVALRPTITDALKML 540
C H + RPT ++ ++ L
Sbjct: 281 LDCWHGEPSQRPTFSELVEHL 301
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 49/251 (19%)
Query: 246 LPNSGAKW-FHVSELEQAT----NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLD 300
LP +KW F L+ F Q +I A GI T R VAVK + +
Sbjct: 17 LPYDASKWEFPRDRLKLGKPLGRGAFGQ--VIEADAFGIDKTATCR---TVAVKMLKEGA 71
Query: 301 TKGDED-FTNEVEIISKIRHR-NLLSLRGCC------------------VTSDDSSGKRR 340
T + +E++I+ I H N+++L G C +++ S +
Sbjct: 72 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 131
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKGIAYLHYGLKPGIYHRDI 397
F+ Y P D +++ H +I VAKG+ +L HRD+
Sbjct: 132 FVPYKEAPEDLYKDFLTLEH------------LICYSFQVAKGMEFL---ASRKCIHRDL 176
Query: 398 KSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEKSDVY 456
+ NILL + K+ DFGLA+ + ++ A ++APE T +SDV+
Sbjct: 177 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 236
Query: 457 SFGIVILELMS 467
SFG+++ E+ S
Sbjct: 237 SFGVLLWEIFS 247
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 252 KWFHVSELEQATNGFSQNNLIGQGASGIVYKGTLRH---GNLVAVKQILD----LDTKGD 304
KW S+ + F + +G G+ G V ++H GN A+K ILD + K
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVM--LVKHKESGNHYAMK-ILDKQKVVKLKQI 85
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRK- 363
E NE I+ + L+ L D+S+ ++V +Y+ G + SH R+
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSF--KDNSN---LYMVMEYVAGGEM-----FSHLRRI 135
Query: 364 -QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSL 422
+ + P + + YLH + +RD+K N+L+D + +V DFG AK+ +
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-V 191
Query: 423 EGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+G T + GT LAPE L + D ++ G++I E+ +G
Sbjct: 192 KGR---TWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 310 EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQ 369
E++I+ + H L++L +D F+V D + G L ++ + K+ T
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDM-----FMVVDLLLGGDLRYHLQQNVHFKEET--- 116
Query: 370 RKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT 429
K I ++ + YL I HRD+K NILLD + + DF +A L + +T
Sbjct: 117 VKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAM-LPRETQIT 172
Query: 430 TRVAGTFGYLAPEYALYGQLTEKS---DVYSFGIVILELMSGRK 470
T +AGT Y+APE + S D +S G+ EL+ GR+
Sbjct: 173 T-MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 49/251 (19%)
Query: 246 LPNSGAKW-FHVSELEQAT----NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLD 300
LP +KW F L+ F Q +I A GI T R VAVK + +
Sbjct: 52 LPYDASKWEFPRDRLKLGKPLGRGAFGQ--VIEADAFGIDKTATCR---TVAVKMLKEGA 106
Query: 301 TKGDED-FTNEVEIISKIRHR-NLLSLRGCC------------------VTSDDSSGKRR 340
T + +E++I+ I H N+++L G C +++ S +
Sbjct: 107 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 166
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKGIAYLHYGLKPGIYHRDI 397
F+ Y P D +++ H +I VAKG+ +L HRD+
Sbjct: 167 FVPYKVAPEDLYKDFLTLEH------------LICYSFQVAKGMEFL---ASRKCIHRDL 211
Query: 398 KSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEKSDVY 456
+ NILL + K+ DFGLA+ + ++ A ++APE T +SDV+
Sbjct: 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 271
Query: 457 SFGIVILELMS 467
SFG+++ E+ S
Sbjct: 272 SFGVLLWEIFS 282
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 36/215 (16%)
Query: 272 IGQGASGIVYKGTLRHGN-LVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHRNLLSLRGC 328
IG+G G V+K R + +VA+K++ LD D +G E+ ++ +++H+N++ L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 329 CVTSDDSSGKRRFLVYDYMP----------NGTLSDNISISHKRKQLTWPQRKKIIVDVA 378
S K+ LV+++ NG L I K + +
Sbjct: 70 L-----HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV-------------KSFLFQLL 111
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGY 438
KG+ + H + HRD+K N+L++ K+A+FGLA+ + V T Y
Sbjct: 112 KGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWY 167
Query: 439 LAPEYALYGQLTEKS-DVYSFGIVILELMSGRKVL 472
P+ +L S D++S G + EL + + L
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 31/240 (12%)
Query: 246 LPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKG------TLRHGNLVAVKQILDL 299
LP +KW E + + +G+GA G V + VAVK + +
Sbjct: 15 LPYDASKW------EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEG 68
Query: 300 DTKGDED-FTNEVEIISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSD--- 354
T + +E++I+ I H N+++L G C G ++ ++ G LS
Sbjct: 69 ATHSEHRALMSELKILIHIGHHLNVVNLLGACT----KPGGPLMVIVEFCKFGNLSTYLR 124
Query: 355 ---NISISHK---RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSEL 408
N + +K + LT VAKG+ +L HRD+ + NILL +
Sbjct: 125 SKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKN 181
Query: 409 NAKVADFGLAKQSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
K+ DFGLA+ + ++ A ++APE T +SDV+SFG+++ E+ S
Sbjct: 182 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 104/251 (41%), Gaps = 49/251 (19%)
Query: 246 LPNSGAKW-FHVSELEQAT----NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLD 300
LP +KW F L+ F Q +I A GI T R VAVK + +
Sbjct: 15 LPYDASKWEFPRDRLKLGKPLGRGAFGQ--VIEADAFGIDKTATCR---TVAVKMLKEGA 69
Query: 301 TKGDED-FTNEVEIISKI-RHRNLLSLRGCC------------------VTSDDSSGKRR 340
T + +E++I+ I H N+++L G C +++ S +
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKGIAYLHYGLKPGIYHRDI 397
F+ Y P D +++ H +I VAKG+ +L HRD+
Sbjct: 130 FVPYKVAPEDLYKDFLTLEH------------LICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 398 KSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEKSDVY 456
+ NILL + K+ DFGLA+ + + A ++APE T +SDV+
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 457 SFGIVILELMS 467
SFG+++ E+ S
Sbjct: 235 SFGVLLWEIFS 245
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 104/251 (41%), Gaps = 49/251 (19%)
Query: 246 LPNSGAKW-FHVSELEQAT----NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLD 300
LP +KW F L+ F Q +I A GI T R VAVK + +
Sbjct: 15 LPYDASKWEFPRDRLKLGKPLGRGAFGQ--VIEADAFGIDKTATCR---TVAVKMLKEGA 69
Query: 301 TKGDED-FTNEVEIISKI-RHRNLLSLRGCC------------------VTSDDSSGKRR 340
T + +E++I+ I H N+++L G C +++ S +
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 341 FLVYDYMPNGTLSDNISISHKRKQLTWPQRKKII---VDVAKGIAYLHYGLKPGIYHRDI 397
F+ Y P D +++ H +I VAKG+ +L HRD+
Sbjct: 130 FVPYKVAPEDLYKDFLTLEH------------LICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 398 KSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEKSDVY 456
+ NILL + K+ DFGLA+ + + A ++APE T +SDV+
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 457 SFGIVILELMS 467
SFG+++ E+ S
Sbjct: 235 SFGVLLWEIFS 245
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 272 IGQGASGIVYKGTLRHGN-LVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCV 330
IG G G+ + N LVAVK I + K DE+ E+ +RH N++ + +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
T + +V +Y G L + I + + + + + + G++Y H
Sbjct: 86 TPTHLA-----IVMEYASGGELFERICNAGR---FSEDEARFFFQQLISGVSYCH---AM 134
Query: 391 GIYHRDIKSTNILLDSE--LNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
+ HRD+K N LLD K+ FG +K S+ HS + V GT Y+APE L +
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSV-LHSQPKSTV-GTPAYIAPEVLLKKE 192
Query: 449 LTEK-SDVYSFGIVILELMSGRKVLDTSTSP 478
K +DV+S G+ + ++ G + P
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEP 223
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 17/193 (8%)
Query: 289 NLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMP 348
LVAVK I + DE+ E+ +RH N++ + +T + ++ +Y
Sbjct: 46 ELVAVKYI-ERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLA-----IIMEYAS 99
Query: 349 NGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSE- 407
G L + I + + + + + + G++Y H I HRD+K N LLD
Sbjct: 100 GGELYERICNAGR---FSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSP 153
Query: 408 -LNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEK-SDVYSFGIVILEL 465
K+ DFG +K S+ HS + V GT Y+APE L + K +DV+S G+ + +
Sbjct: 154 APRLKICDFGYSKSSV-LHSQPKSTV-GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVM 211
Query: 466 MSGRKVLDTSTSP 478
+ G + P
Sbjct: 212 LVGAYPFEDPEEP 224
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 35/243 (14%)
Query: 246 LPNSGAKW-FHVSELEQAT----NGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLD 300
LP +KW F L+ F Q +I A GI T R VAVK + +
Sbjct: 17 LPYDASKWEFPRDRLKLGKPLGRGAFGQ--VIEADAFGIDKTATXR---TVAVKMLKEGA 71
Query: 301 TKGDED-FTNEVEIISKIRHR-NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISI 358
T + +E++I+ I H N+++L G C G ++ ++ G LS +
Sbjct: 72 THSEHRALMSELKILIHIGHHLNVVNLLGACT----KPGGPLMVIVEFCKFGNLS--TYL 125
Query: 359 SHKRKQLTWPQRKKIIVD-------------VAKGIAYLHYGLKPGIYHRDIKSTNILLD 405
KR + + + + D VAKG+ +L HRD+ + NILL
Sbjct: 126 RSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLS 182
Query: 406 SELNAKVADFGLAKQSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEKSDVYSFGIVILE 464
+ K+ DFGLA+ + + A ++APE T +SDV+SFG+++ E
Sbjct: 183 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 465 LMS 467
+ S
Sbjct: 243 IFS 245
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 369 QRKKIIVDVAKGIAY-------LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS 421
Q +K +D+A I Y L Y HRDI + N+L+ S K+ DFGL++
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLDTSTSPFQ 480
+ + ++ ++APE + + T SDV+ FG+ + E LM G K PFQ
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK-------PFQ 214
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 48/240 (20%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLR------HGNLVAVKQIL-DLDTKGDEDFTNEVE 312
E N S +G GA G V + T VAVK + E +E++
Sbjct: 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78
Query: 313 IISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRK 371
++S + H N+++L G C G ++ +Y G L + + KR +
Sbjct: 79 VLSYLGNHMNIVNLLGACTI-----GGPTLVITEYCCYGDLLN--FLRRKRDSFICSKTS 131
Query: 372 KIIV-----------------DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVAD 414
I+ VAKG+A+L HRD+ + NILL K+ D
Sbjct: 132 PAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICD 188
Query: 415 FGLAKQ-------SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
FGLA+ ++G++ L + ++APE T +SDV+S+GI + EL S
Sbjct: 189 FGLARDIKNDSNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 369 QRKKIIVDVAKGIAY-------LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS 421
Q +K +D+A I Y L Y HRDI + N+L+ S K+ DFGL++
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLDTSTSPFQ 480
+ + ++ ++APE + + T SDV+ FG+ + E LM G K PFQ
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK-------PFQ 214
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 369 QRKKIIVDVAKGIAY-------LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS 421
Q +K +D+A I Y L Y HRDI + N+L+ S K+ DFGL++
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLDTSTSPFQ 480
+ ++ ++APE + + T SDV+ FG+ + E LM G K PFQ
Sbjct: 162 EDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK-------PFQ 214
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 369 QRKKIIVDVAKGIAY-------LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS 421
Q +K +D+A I Y L Y HRDI + N+L+ S K+ DFGL++
Sbjct: 99 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLDTSTSPFQ 480
+ + ++ ++APE + + T SDV+ FG+ + E LM G K PFQ
Sbjct: 159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK-------PFQ 211
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 369 QRKKIIVDVAKGIAY-------LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS 421
Q +K +D+A I Y L Y HRDI + N+L+ S K+ DFGL++
Sbjct: 107 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLDTSTSPFQ 480
+ + ++ ++APE + + T SDV+ FG+ + E LM G K PFQ
Sbjct: 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK-------PFQ 219
Query: 481 LITD 484
+ +
Sbjct: 220 GVKN 223
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 369 QRKKIIVDVAKGIAY-------LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS 421
Q +K +D+A I Y L Y HRDI + N+L+ S K+ DFGL++
Sbjct: 130 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 189
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLDTSTSPFQ 480
+ + ++ ++APE + + T SDV+ FG+ + E LM G K PFQ
Sbjct: 190 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK-------PFQ 242
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 369 QRKKIIVDVAKGIAY-------LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS 421
Q +K +D+A I Y L Y HRDI + N+L+ S K+ DFGL++
Sbjct: 104 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 163
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLDTSTSPFQ 480
+ + ++ ++APE + + T SDV+ FG+ + E LM G K PFQ
Sbjct: 164 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK-------PFQ 216
Query: 481 LITD 484
+ +
Sbjct: 217 GVKN 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 48/240 (20%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLR------HGNLVAVKQIL-DLDTKGDEDFTNEVE 312
E N S +G GA G V + T VAVK + E +E++
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 313 IISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRK 371
++S + H N+++L G C G ++ +Y G L + + KR +
Sbjct: 102 VLSYLGNHMNIVNLLGACTI-----GGPTLVITEYCCYGDLLN--FLRRKRDSFICSKTS 154
Query: 372 KIIV-----------------DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVAD 414
I+ VAKG+A+L HRD+ + NILL K+ D
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICD 211
Query: 415 FGLAKQ-------SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
FGLA+ ++G++ L + ++APE T +SDV+S+GI + EL S
Sbjct: 212 FGLARHIKNDSNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 29/205 (14%)
Query: 285 LRHGNLVAVKQILDLDT------------------KGDEDFTNEVEIISKIRHRNLLSLR 326
L G+ VK++LD +T G+ + E++++ ++RH+N++ L
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 327 GCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHY 386
+ ++ ++V +Y G S+ KR + Q + G+ YLH
Sbjct: 73 DVLYNEEK---QKMYMVMEYCVCGMQEMLDSVPEKRFPVC--QAHGYFCQLIDGLEYLH- 126
Query: 387 GLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVA-GTFGYLAPEYA- 444
GI H+DIK N+LL + K++ G+A+ + T R + G+ + PE A
Sbjct: 127 --SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIAN 184
Query: 445 -LYGQLTEKSDVYSFGIVILELMSG 468
L K D++S G+ + + +G
Sbjct: 185 GLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 48/240 (20%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLR------HGNLVAVKQIL-DLDTKGDEDFTNEVE 312
E N S +G GA G V + T VAVK + E +E++
Sbjct: 35 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 94
Query: 313 IISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRK 371
++S + H N+++L G C G ++ +Y G L + + KR +
Sbjct: 95 VLSYLGNHMNIVNLLGACTI-----GGPTLVITEYCCYGDLLN--FLRRKRDSFICSKTS 147
Query: 372 KIIV-----------------DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVAD 414
I+ VAKG+A+L HRD+ + NILL K+ D
Sbjct: 148 PAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICD 204
Query: 415 FGLAKQ-------SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
FGLA+ ++G++ L + ++APE T +SDV+S+GI + EL S
Sbjct: 205 FGLARDIKNDSNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 369 QRKKIIVDVAKGIAY-------LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS 421
Q +K +D+A I Y L Y HRDI + N+L+ S K+ DFGL++
Sbjct: 105 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 164
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLDTSTSPFQ 480
+ + ++ ++APE + + T SDV+ FG+ + E LM G K PFQ
Sbjct: 165 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK-------PFQ 217
Query: 481 LITD 484
+ +
Sbjct: 218 GVKN 221
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 272 IGQGASGIVYKGTLRHGN-LVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCV 330
IG G G+ + N LVAVK I + K DE+ E+ +RH N++ + +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 331 TSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKP 390
T + +V +Y G L + I + + + + + + G++Y H
Sbjct: 86 TPTHLA-----IVMEYASGGELFERICNAGR---FSEDEARFFFQQLISGVSYCH---AM 134
Query: 391 GIYHRDIKSTNILLDSE--LNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQ 448
+ HRD+K N LLD K+ FG +K S+ HS V GT Y+APE L +
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSV-LHSQPKDTV-GTPAYIAPEVLLKKE 192
Query: 449 LTEK-SDVYSFGIVILELMSGRKVLDTSTSP 478
K +DV+S G+ + ++ G + P
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEP 223
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 271 LIGQGASGIVYKGT-LRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIR-HRNLLSLRGC 328
++ +G VY+ + G A+K++L + + + EV + K+ H N++ C
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF--C 92
Query: 329 CVTS----DDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
S + +G+ FL+ + G L + + R L+ KI + + ++
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLA 418
H KP I HRD+K N+LL ++ K+ DFG A
Sbjct: 153 HRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 24/214 (11%)
Query: 272 IGQGASGIVYKGTLRHGN-LVAVKQILDLDTKGDEDFTN-EVEIISK--IRHRNLLSLRG 327
IG G G+ + N LVAVK I +G++ N + EII+ +RH N++ +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYI----ERGEKIAANVKREIINHRSLRHPNIVRFKE 82
Query: 328 CCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYG 387
+T + +V +Y G L + I + + + + + G++Y H
Sbjct: 83 VILTPTHLA-----IVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVSYCH-- 132
Query: 388 LKPGIYHRDIKSTNILLDSE--LNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
+ HRD+K N LLD K+ DFG +K S+ HS + V GT Y+APE L
Sbjct: 133 -AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV-LHSQPKSTV-GTPAYIAPEVLL 189
Query: 446 YGQLTEK-SDVYSFGIVILELMSGRKVLDTSTSP 478
+ K +DV+S G+ + ++ G + P
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEP 223
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 48/240 (20%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLR------HGNLVAVKQIL-DLDTKGDEDFTNEVE 312
E N S +G GA G V + T VAVK + E +E++
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 313 IISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRK 371
++S + H N+++L G C G ++ +Y G L + + KR +
Sbjct: 102 VLSYLGNHMNIVNLLGACTI-----GGPTLVITEYCCYGDLLN--FLRRKRDSFICSKTS 154
Query: 372 KIIV-----------------DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVAD 414
I+ VAKG+A+L HRD+ + NILL K+ D
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICD 211
Query: 415 FGLAKQ-------SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
FGLA+ ++G++ L + ++APE T +SDV+S+GI + EL S
Sbjct: 212 FGLARDIKNDSNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 48/240 (20%)
Query: 260 EQATNGFSQNNLIGQGASGIVYKGTLR------HGNLVAVKQIL-DLDTKGDEDFTNEVE 312
E N S +G GA G V + T VAVK + E +E++
Sbjct: 37 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 96
Query: 313 IISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRK 371
++S + H N+++L G C G ++ +Y G L + + KR +
Sbjct: 97 VLSYLGNHMNIVNLLGACTI-----GGPTLVITEYCCYGDLLN--FLRRKRDSFICSKTS 149
Query: 372 KIIV-----------------DVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVAD 414
I+ VAKG+A+L HRD+ + NILL K+ D
Sbjct: 150 PAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICD 206
Query: 415 FGLAKQ-------SLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
FGLA+ ++G++ L + ++APE T +SDV+S+GI + EL S
Sbjct: 207 FGLARDIKNDSNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 65/257 (25%)
Query: 255 HVSELEQA-TNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILDLDTKGDEDFTN--- 309
++ EQ+ N ++G G+SG +V++G+ + G VAVK++L DF +
Sbjct: 5 NIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRML-------IDFCDIAL 56
Query: 310 -EVEIISKIR-HRNLLSLRGCCVTSDDSSGKRRFL----------VYDYMPNGTLSD-NI 356
E++++++ H N++ C T+D RFL + D + + +SD N+
Sbjct: 57 MEIKLLTESDDHPNVIRYY-CSETTD------RFLYIALELCNLNLQDLVESKNVSDENL 109
Query: 357 SISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS---------- 406
+ + ++ ++ +A G+A+LH LK I HRD+K NIL+ +
Sbjct: 110 KLQKEYNPIS------LLRQIASGVAHLH-SLK--IIHRDLKPQNILVSTSSRFTADQQT 160
Query: 407 ---ELNAKVADFGLAKQSLEGHSHLTTRV---AGTFGYLAPE-------YALYGQLTEKS 453
L ++DFGL K+ G S T + +GT G+ APE +LT
Sbjct: 161 GAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSI 220
Query: 454 DVYSFGIVILELMSGRK 470
D++S G V ++S K
Sbjct: 221 DIFSMGCVFYYILSKGK 237
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 369 QRKKIIVDVAKGIAY-------LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS 421
Q +K +D+A I Y L Y HRDI + N+L+ S K+ DFGL++
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLDTSTSPFQ 480
+ + ++ ++APE + + T SDV+ FG+ + E LM G K PFQ
Sbjct: 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK-------PFQ 594
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 108/251 (43%), Gaps = 38/251 (15%)
Query: 261 QATNGFSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDL--DTKGDEDFTNEVEIISKI 317
+ + + +LIG+G+ G VY ++ N VA+K++ + D + E+ I++++
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 318 RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDV 377
+ ++ L + D ++V + SD + LT K I+ ++
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIAD----SDLKKLFKTPIFLTEQHVKTILYNL 140
Query: 378 AKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK------------------ 419
G ++H + GI HRD+K N LL+ + + K+ DFGLA+
Sbjct: 141 LLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKE 197
Query: 420 -------QSLEGHSHLTTRVAGTFGYLAPEYALYGQ-LTEKSDVYSFGIVILELMSGRKV 471
+ LT+ V T Y APE L + T D++S G + EL++ K
Sbjct: 198 ENEEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
Query: 472 -LDTSTSPFQL 481
++ T+ F L
Sbjct: 257 HINNPTNRFPL 267
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 369 QRKKIIVDVAKGIAY-------LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS 421
Q +K +D+A I Y L Y HRDI + N+L+ + K+ DFGL++
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 161
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLDTSTSPFQ 480
+ + ++ ++APE + + T SDV+ FG+ + E LM G K PFQ
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK-------PFQ 214
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 106/247 (42%), Gaps = 42/247 (17%)
Query: 246 LPNSGAKWFHVSELEQATNGFSQNNLIGQGASGIVYKG---------TLRHGNLVAVKQI 296
LP +KW E + + +G+GA G V + T R VAVK +
Sbjct: 16 LPYDASKW------EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCR---TVAVKML 66
Query: 297 LDLDTKGDED-FTNEVEIISKI-RHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSD 354
+ T + +E++I+ I H N+++L G C G ++ ++ G LS
Sbjct: 67 KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT----KPGGPLMVIVEFCKFGNLST 122
Query: 355 NISISHKRKQLTWPQRKKIIVD-------------VAKGIAYLHYGLKPGIYHRDIKSTN 401
+ S + + + + + + D VAKG+ +L HRD+ + N
Sbjct: 123 YLR-SKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 178
Query: 402 ILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG-TFGYLAPEYALYGQLTEKSDVYSFGI 460
ILL + K+ DFGLA+ + + A ++APE T +SDV+SFG+
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 461 VILELMS 467
++ E+ S
Sbjct: 239 LLWEIFS 245
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 256 VSELEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIIS 315
V ++ F +IG+GA G V L++ + V +IL N+ E++
Sbjct: 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKIL-----------NKWEMLK 114
Query: 316 KIRHRNLLSLRGCCVTSDD----------SSGKRRFLVYDYMPNGTLSDNISISHKR--K 363
+ R V D +LV DY G L +S R +
Sbjct: 115 RAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPE 174
Query: 364 QLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLE 423
++ ++++ + + LHY HRDIK NIL+D + ++ADFG + +E
Sbjct: 175 EMARFYLAEMVIAI-DSVHQLHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLME 227
Query: 424 GHSHLTTRVAGTFGYLAPEY-----ALYGQLTEKSDVYSFGIVILELMSGR 469
+ ++ GT Y++PE G+ + D +S G+ + E++ G
Sbjct: 228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 30/225 (13%)
Query: 256 VSELEQATNGFSQNNL-------IGQGASGIVYKGTLRHGNLVAVK----QILDLDTKGD 304
+ ELE G S + IG+G+ VYKG L V V Q L
Sbjct: 11 IEELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSER 69
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKR-RFLVYDYMPNGTLS---DNISISH 360
+ F E E + ++H N++ ++ GK+ LV + +GTL +
Sbjct: 70 QRFKEEAEXLKGLQHPNIVRFYDSWEST--VKGKKCIVLVTELXTSGTLKTYLKRFKVXK 127
Query: 361 KRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAK 419
+ +W ++ + KG+ +LH P I HRD+K NI + + K+ D GLA
Sbjct: 128 IKVLRSWCRQ------ILKGLQFLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLAT 180
Query: 420 QSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE 464
+ V GT + APE + E DVY+FG LE
Sbjct: 181 LK---RASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLE 221
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 42/246 (17%)
Query: 249 SGAKWFHVSELEQATNGFSQNNLIGQGASGIVY----KGTLRHGNLVAVKQILDLDTKGD 304
G K HV + + +LIG+G+ G VY K T ++ + V ++ + D
Sbjct: 17 QGIKNVHVPD------NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE-DLIDC 69
Query: 305 EDFTNEVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQ 364
+ E+ I+++++ ++ L + D ++V + SD +
Sbjct: 70 KRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD----SDLKKLFKTPIF 125
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAK----- 419
LT K I+ ++ G ++H + GI HRD+K N LL+ + + KV DFGLA+
Sbjct: 126 LTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182
Query: 420 ------QSLEGHS-----------HLTTRVAGTFGYLAPEYALYGQLTEKS-DVYSFGIV 461
LE + LT+ V T Y APE L + KS D++S G +
Sbjct: 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCI 241
Query: 462 ILELMS 467
EL++
Sbjct: 242 FAELLN 247
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSEL-NA--KVADFGLAKQSLEGHSHL 428
+I+ + + I YLH I HRD+K N+L S+ NA K+ DFG AK++ H+ L
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSL 181
Query: 429 TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
TT + Y+APE + + D++S G+++ L+ G
Sbjct: 182 TTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSEL-NA--KVADFGLAKQSLEGHSHL 428
+I+ + + I YLH I HRD+K N+L S+ NA K+ DFG AK++ H+ L
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSL 180
Query: 429 TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
TT + Y+APE + + D++S G+++ L+ G
Sbjct: 181 TTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSEL-NA--KVADFGLAKQSLEGHSHL 428
+I+ + + I YLH I HRD+K N+L S+ NA K+ DFG AK++ H+ L
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSL 182
Query: 429 TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
TT + Y+APE + + D++S G+++ L+ G
Sbjct: 183 TTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 369 QRKKIIVDVAKGIAY-------LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQS 421
Q +K +D+A I Y L Y HRDI + N+L+ + K+ DFGL++
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 541
Query: 422 LEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILE-LMSGRKVLDTSTSPFQ 480
+ + ++ ++APE + + T SDV+ FG+ + E LM G K PFQ
Sbjct: 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK-------PFQ 594
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSEL-NA--KVADFGLAKQSLEGHSHL 428
+I+ + + I YLH I HRD+K N+L S+ NA K+ DFG AK++ H+ L
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSL 174
Query: 429 TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
TT + Y+APE + + D++S G+++ L+ G
Sbjct: 175 TTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 120/253 (47%), Gaps = 61/253 (24%)
Query: 255 HVSELEQA-TNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILDLDTKGDEDFTN--- 309
++ EQ+ N ++G G+SG +V++G+ + G VAVK++L DF +
Sbjct: 23 NIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRML-------IDFCDIAL 74
Query: 310 -EVEIISKIR-HRNLLSLRGCCVTSDDSSGKRRFL----------VYDYMPNGTLSD-NI 356
E++++++ H N++ C T+D RFL + D + + +SD N+
Sbjct: 75 MEIKLLTESDDHPNVIRYY-CSETTD------RFLYIALELCNLNLQDLVESKNVSDENL 127
Query: 357 SISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILL--------DSEL 408
+ + ++ ++ +A G+A+LH LK I HRD+K NIL+ D +
Sbjct: 128 KLQKEYNPIS------LLRQIASGVAHLH-SLK--IIHRDLKPQNILVSTSSRFTADQQT 178
Query: 409 NAK-----VADFGLAKQSLEGHSHLTTRV---AGTFGYLAPEY---ALYGQLTEKSDVYS 457
A+ ++DFGL K+ G + +GT G+ APE + +LT D++S
Sbjct: 179 GAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFS 238
Query: 458 FGIVILELMSGRK 470
G V ++S K
Sbjct: 239 MGCVFYYILSKGK 251
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSEL-NA--KVADFGLAKQSLEGHSHL 428
+I+ + + I YLH I HRD+K N+L S+ NA K+ DFG AK++ H+ L
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSL 175
Query: 429 TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
TT + Y+APE + + D++S G+++ L+ G
Sbjct: 176 TTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 120/253 (47%), Gaps = 61/253 (24%)
Query: 255 HVSELEQA-TNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILDLDTKGDEDFTN--- 309
++ EQ+ N ++G G+SG +V++G+ + G VAVK++L DF +
Sbjct: 23 NIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRML-------IDFCDIAL 74
Query: 310 -EVEIISKIR-HRNLLSLRGCCVTSDDSSGKRRFL----------VYDYMPNGTLSD-NI 356
E++++++ H N++ C T+D RFL + D + + +SD N+
Sbjct: 75 MEIKLLTESDDHPNVIRYY-CSETTD------RFLYIALELCNLNLQDLVESKNVSDENL 127
Query: 357 SISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILL--------DSEL 408
+ + ++ ++ +A G+A+LH LK I HRD+K NIL+ D +
Sbjct: 128 KLQKEYNPIS------LLRQIASGVAHLH-SLK--IIHRDLKPQNILVSTSSRFTADQQT 178
Query: 409 NAK-----VADFGLAKQSLEGHSHLTTRV---AGTFGYLAPEY---ALYGQLTEKSDVYS 457
A+ ++DFGL K+ G + +GT G+ APE + +LT D++S
Sbjct: 179 GAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFS 238
Query: 458 FGIVILELMSGRK 470
G V ++S K
Sbjct: 239 MGCVFYYILSKGK 251
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSEL-NA--KVADFGLAKQSLEGHSHL 428
+I+ + + I YLH I HRD+K N+L S+ NA K+ DFG AK++ H+ L
Sbjct: 165 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSL 220
Query: 429 TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
TT + Y+APE + + D++S G+++ L+ G
Sbjct: 221 TTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSEL-NA--KVADFGLAKQSLEGHSHL 428
+I+ + + I YLH I HRD+K N+L S+ NA K+ DFG AK++ H+ L
Sbjct: 135 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSL 190
Query: 429 TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
TT + Y+APE + + D++S G+++ L+ G
Sbjct: 191 TTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSEL-NA--KVADFGLAKQSLEGHSHL 428
+I+ + + I YLH I HRD+K N+L S+ NA K+ DFG AK++ H+ L
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSL 176
Query: 429 TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
TT + Y+APE + + D++S G+++ L+ G
Sbjct: 177 TTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSEL-NA--KVADFGLAKQSLEGHSHL 428
+I+ + + I YLH I HRD+K N+L S+ NA K+ DFG AK++ H+ L
Sbjct: 171 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSL 226
Query: 429 TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
TT + Y+APE + + D++S G+++ L+ G
Sbjct: 227 TTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSEL-NA--KVADFGLAKQSLEGHSHL 428
+I+ + + I YLH I HRD+K N+L S+ NA K+ DFG AK++ H+ L
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSL 176
Query: 429 TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
TT + Y+APE + + D++S G+++ L+ G
Sbjct: 177 TTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 25/139 (17%)
Query: 341 FLVYDYMPNGTLSD---NISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDI 397
++V +YMP G L + N + K + +V + +H G HRD+
Sbjct: 145 YMVMEYMPGGDLVNLMSNYDVPEKWARF-------YTAEVVLALDAIH---SMGFIHRDV 194
Query: 398 KSTNILLDSELNAKVADFGL-AKQSLEGHSHLTTRVAGTFGYLAPEY-------ALYGQL 449
K N+LLD + K+ADFG K + EG T V GT Y++PE YG+
Sbjct: 195 KPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGR- 252
Query: 450 TEKSDVYSFGIVILELMSG 468
+ D +S G+ + E++ G
Sbjct: 253 --ECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 25/139 (17%)
Query: 341 FLVYDYMPNGTLSD---NISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDI 397
++V +YMP G L + N + K + +V + +H G HRD+
Sbjct: 150 YMVMEYMPGGDLVNLMSNYDVPEKWARF-------YTAEVVLALDAIH---SMGFIHRDV 199
Query: 398 KSTNILLDSELNAKVADFGL-AKQSLEGHSHLTTRVAGTFGYLAPEY-------ALYGQL 449
K N+LLD + K+ADFG K + EG T V GT Y++PE YG+
Sbjct: 200 KPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGR- 257
Query: 450 TEKSDVYSFGIVILELMSG 468
+ D +S G+ + E++ G
Sbjct: 258 --ECDWWSVGVFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 25/139 (17%)
Query: 341 FLVYDYMPNGTLSD---NISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDI 397
++V +YMP G L + N + K + +V + +H G HRD+
Sbjct: 150 YMVMEYMPGGDLVNLMSNYDVPEKWARF-------YTAEVVLALDAIH---SMGFIHRDV 199
Query: 398 KSTNILLDSELNAKVADFGL-AKQSLEGHSHLTTRVAGTFGYLAPEY-------ALYGQL 449
K N+LLD + K+ADFG K + EG T V GT Y++PE YG+
Sbjct: 200 KPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGR- 257
Query: 450 TEKSDVYSFGIVILELMSG 468
+ D +S G+ + E++ G
Sbjct: 258 --ECDWWSVGVFLYEMLVG 274
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG-T 435
VAKG+ +L HRD+ + NILL + K+ DFGLA+ + ++ A
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 436 FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++APE T +SDV+SFG+++ E+ S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG-T 435
VAKG+ +L HRD+ + NILL + K+ DFGLA+ + ++ A
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 436 FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++APE T +SDV+SFG+++ E+ S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 78/191 (40%), Gaps = 21/191 (10%)
Query: 261 QATNGFSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGD---ED-----FTNEV 311
+ + +S + +G GA G V+ + N V VK I D ED T E+
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 312 EIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRK 371
I+S++ H N++ + D + F +G+ D + + +L P
Sbjct: 81 AILSRVEHANIIKVL-------DIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLAS 133
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTR 431
I + + YL LK I HRDIK NI++ + K+ DFG A G T
Sbjct: 134 YIFRQLVSAVGYLR--LK-DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT-- 188
Query: 432 VAGTFGYLAPE 442
GT Y APE
Sbjct: 189 FCGTIEYCAPE 199
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG-T 435
VAKG+ +L HRD+ + NILL + K+ DFGLA+ + ++ A
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 436 FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++APE T +SDV+SFG+++ E+ S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAG-T 435
VAKG+ +L HRD+ + NILL + K+ DFGLA+ + ++ A
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 436 FGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++APE T +SDV+SFG+++ E+ S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 37/219 (16%)
Query: 266 FSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILDLDTKGDEDFT---NEVEIISKI-RHR 320
F +++G GA G IVY+G + + VAVK+IL E F+ EV+++ + H
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRD-VAVKRILP------ECFSFADREVQLLRESDEHP 78
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIV--DVA 378
N++ R C D R+F Y+ + + ++K + I +
Sbjct: 79 NVI--RYFCTEKD-----RQF---QYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTT 128
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLD-----SELNAKVADFGLAKQSLEGHSHLTTR-- 431
G+A+LH I HRD+K NIL+ ++ A ++DFGL K+ G + R
Sbjct: 129 SGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSG 185
Query: 432 VAGTFGYLAPEYA---LYGQLTEKSDVYSFGIVILELMS 467
V GT G++APE T D++S G V ++S
Sbjct: 186 VPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 377 VAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLT---TRVA 433
VA+G+ +L HRD+ + NILL K+ DFGLA+ + ++ TR+
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 434 GTFGYLAPEYALYGQLTEKSDVYSFGIVILELMS 467
++APE + KSDV+S+G+++ E+ S
Sbjct: 265 --LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 394 HRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKS 453
HRD+K NIL+ ++ A + DFG+A + + GT Y APE T ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 454 DVYSFGIVILELMSG 468
D+Y+ V+ E ++G
Sbjct: 217 DIYALTCVLYECLTG 231
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSEL-NA--KVADFGLAKQSLEGHSHL 428
+I+ + + I YLH I HRD+K N+L S+ NA K+ DFG AK++ H+ L
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSL 174
Query: 429 TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
T + Y+APE + + D++S G+++ L+ G
Sbjct: 175 TEPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 65/257 (25%)
Query: 255 HVSELEQA-TNGFSQNNLIGQGASG-IVYKGTLRHGNLVAVKQILDLDTKGDEDFTN--- 309
++ EQ+ N ++G G+SG +V++G+ + G VAVK++L DF +
Sbjct: 5 NIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRML-------IDFCDIAL 56
Query: 310 -EVEIISKIR-HRNLLSLRGCCVTSDDSSGKRRFL----------VYDYMPNGTLSD-NI 356
E++++++ H N++ C T+D RFL + D + + +SD N+
Sbjct: 57 MEIKLLTESDDHPNVIRYY-CSETTD------RFLYIALELCNLNLQDLVESKNVSDENL 109
Query: 357 SISHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDS---------- 406
+ + ++ ++ +A G+A+LH LK I HRD+K NIL+ +
Sbjct: 110 KLQKEYNPIS------LLRQIASGVAHLH-SLK--IIHRDLKPQNILVSTSSRFTADQQT 160
Query: 407 ---ELNAKVADFGLAKQSLEGHSHLTTRV---AGTFGYLAPE-------YALYGQLTEKS 453
L ++DFGL K+ G + +GT G+ APE +LT
Sbjct: 161 GAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSI 220
Query: 454 DVYSFGIVILELMSGRK 470
D++S G V ++S K
Sbjct: 221 DIFSMGCVFYYILSKGK 237
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 32/217 (14%)
Query: 269 NNLIGQGASGIVYKGTLR----HGNLVAVKQILDLDTKG----DEDFTNEVEIISKIRHR 320
N +GQG ++KG R +G L + +L + K E F ++SK+ H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
+L+ G C D++ LV +++ G+L + + + W ++VAK
Sbjct: 73 HLVLNYGVCFCGDEN-----ILVQEFVKFGSLDTYLKKNKNCINILWK------LEVAKQ 121
Query: 381 IAY-LHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHS-------HLTTRV 432
+A+ +H+ + + H ++ + NILL E + K + K S G S L R+
Sbjct: 122 LAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI 181
Query: 433 AGTFGYLAPE-YALYGQLTEKSDVYSFGIVILELMSG 468
++ PE L +D +SFG + E+ SG
Sbjct: 182 P----WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 32/217 (14%)
Query: 269 NNLIGQGASGIVYKGTLR----HGNLVAVKQILDLDTKG----DEDFTNEVEIISKIRHR 320
N +GQG ++KG R +G L + +L + K E F ++SK+ H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 321 NLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKG 380
+L+ G CV D++ LV +++ G+L + + + W ++VAK
Sbjct: 73 HLVLNYGVCVCGDEN-----ILVQEFVKFGSLDTYLKKNKNCINILWK------LEVAKQ 121
Query: 381 I-AYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHS-------HLTTRV 432
+ A +H+ + + H ++ + NILL E + K + K S G S L R+
Sbjct: 122 LAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI 181
Query: 433 AGTFGYLAPE-YALYGQLTEKSDVYSFGIVILELMSG 468
++ PE L +D +SFG + E+ SG
Sbjct: 182 P----WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 372 KIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSEL-NA--KVADFGLAKQSLEGHSHL 428
+I + + I YLH I HRD+K N+L S+ NA K+ DFG AK++ H+ L
Sbjct: 165 EIXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSL 220
Query: 429 TTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
TT + Y+APE + + D +S G++ L+ G
Sbjct: 221 TTPCYTPY-YVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 266 FSQNNLIGQGASGIVYK-GTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLS 324
F + + +G G+ G V+K + G L AVK+ + +G +D + ++++ +
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMS-PFRGPKDRARK---LAEVGSHEKVG 114
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRK--KIIVDVAKGIA 382
CCV + + + L Y+ ++ + + P+ + + D +A
Sbjct: 115 QHPCCVRLEQAWEEGGIL---YLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALA 171
Query: 383 YLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSHLTTRVAGTFGYLAPE 442
+LH G+ H D+K NI L K+ DFGL + G + G Y+APE
Sbjct: 172 HLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL--GTAGAGEVQEGDPRYMAPE 226
Query: 443 YALYGQLTEKSDVYSFGIVILEL 465
L G +DV+S G+ ILE+
Sbjct: 227 L-LQGSYGTAADVFSLGLTILEV 248
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 15/138 (10%)
Query: 337 GKRRFLV-YDYMPNGTLSDNISISHKRKQLTWPQRK--KIIVDVAKGIAYLHYGLKPGIY 393
GKR L+ + M G L I +R + +R+ +I+ D+ I +LH I
Sbjct: 97 GKRCLLIIMECMEGGELFSRIQ---ERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIA 150
Query: 394 HRDIKSTNILLDS-ELNA--KVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLT 450
HRD+K N+L S E +A K+ DFG AK++ + + L T + Y+APE +
Sbjct: 151 HRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ--NALQTPCYTPY-YVAPEVLGPEKYD 207
Query: 451 EKSDVYSFGIVILELMSG 468
+ D++S G+++ L+ G
Sbjct: 208 KSCDMWSLGVIMYILLCG 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 15/138 (10%)
Query: 337 GKRRFLV-YDYMPNGTLSDNISISHKRKQLTWPQRK--KIIVDVAKGIAYLHYGLKPGIY 393
GKR L+ + M G L I +R + +R+ +I+ D+ I +LH I
Sbjct: 78 GKRCLLIIMECMEGGELFSRIQ---ERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIA 131
Query: 394 HRDIKSTNILLDS-ELNA--KVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLT 450
HRD+K N+L S E +A K+ DFG AK++ + + L T + Y+APE +
Sbjct: 132 HRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ--NALQTPCYTPY-YVAPEVLGPEKYD 188
Query: 451 EKSDVYSFGIVILELMSG 468
+ D++S G+++ L+ G
Sbjct: 189 KSCDMWSLGVIMYILLCG 206
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 21/210 (10%)
Query: 270 NLIGQGASGIVYKGTLRH-GNLVAVKQILDL----DTKG--DEDFTNEVEIISKIRHRNL 322
+IG+G +V + R G AVK I+D+ + G ED E I ++H ++
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 90
Query: 323 LSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI- 381
+ L SS ++V+++M L I KR + + + + I
Sbjct: 91 VEL-----LETYSSDGMLYMVFEFMDGADLCFEIV---KRADAGFVYSEAVASHYMRQIL 142
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNA---KVADFGLAKQSLEGHSHLTTRVAGTFGY 438
L Y I HRD+K +LL S+ N+ K+ FG+A Q E RV GT +
Sbjct: 143 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHF 201
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+APE + DV+ G+++ L+SG
Sbjct: 202 MAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 21/210 (10%)
Query: 270 NLIGQGASGIVYKGTLRH-GNLVAVKQILDL----DTKG--DEDFTNEVEIISKIRHRNL 322
+IG+G +V + R G AVK I+D+ + G ED E I ++H ++
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 323 LSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGI- 381
+ L SS ++V+++M L I KR + + + + I
Sbjct: 89 VEL-----LETYSSDGMLYMVFEFMDGADLCFEIV---KRADAGFVYSEAVASHYMRQIL 140
Query: 382 AYLHYGLKPGIYHRDIKSTNILLDSELNA---KVADFGLAKQSLEGHSHLTTRVAGTFGY 438
L Y I HRD+K +LL S+ N+ K+ FG+A Q E RV GT +
Sbjct: 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHF 199
Query: 439 LAPEYALYGQLTEKSDVYSFGIVILELMSG 468
+APE + DV+ G+++ L+SG
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 22/204 (10%)
Query: 272 IGQGASGIVYKGTLRHGN-LVAVKQI-LDLDTKG-DEDFTNEVEIISKIRHRNLLSLRGC 328
+G+G G VYK N VA+K+I L+ + +G EV ++ +++HRN++ L+
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
R L+++Y N D K ++ K + + G+ + H
Sbjct: 102 I-----HHNHRLHLIFEYAEN----DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH--- 149
Query: 389 KPGIYHRDIKSTNILLD----SELNA-KVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEY 443
HRD+K N+LL SE K+ DFGLA+ T + T Y PE
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPPEI 208
Query: 444 ALYGQLTEKS-DVYSFGIVILELM 466
L + S D++S + E++
Sbjct: 209 LLGSRHYSTSVDIWSIACIWAEML 232
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 272 IGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIISKIRHRNLLSLRGCCVT 331
+G+G GIV++ + + + + E+ I++ RHRN+L L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF-- 70
Query: 332 SDDSSGKRRFLVYDYMPNGTLSDNISIS----HKRKQLTWPQRKKIIVDVAKGIAYLHYG 387
S + ++++++ + + I+ S ++R+ +++ + V + + +LH
Sbjct: 71 ---ESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQ------VCEALQFLH-- 119
Query: 388 LKPGIYHRDIKSTNILLDSELNA--KVADFGLAKQSLEGHSHLTTRVAGTFGYLAPEYAL 445
I H DI+ NI+ + ++ K+ +FG A+Q G + A Y APE
Sbjct: 120 -SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE--YYAPEVHQ 176
Query: 446 YGQLTEKSDVYSFGIVILELMSG 468
+ ++ +D++S G ++ L+SG
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSG 199
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 31/229 (13%)
Query: 256 VSELEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIIS 315
V E++ F +IG+GA G V +++ + +IL N+ E++
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL-----------NKWEMLK 114
Query: 316 KIRHRNLLSLRGCCVTSD----------DSSGKRRFLVYDYMPNGTLSDNISISHKRKQL 365
+ R V D +LV DY G L +S +L
Sbjct: 115 RAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLL--TLLSKFEDKL 172
Query: 366 TWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH 425
+ I ++ I +H + HRDIK N+LLD + ++ADFG + +
Sbjct: 173 PEDMARFYIGEMVLAIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG 229
Query: 426 SHLTTRVAGTFGYLAPEYAL-----YGQLTEKSDVYSFGIVILELMSGR 469
+ ++ GT Y++PE G+ + D +S G+ + E++ G
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 90/226 (39%), Gaps = 26/226 (11%)
Query: 255 HVSELEQATNGFSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFTN---- 309
H+ E E + + L+G G G VY G NL VA+K + + N
Sbjct: 22 HMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 81
Query: 310 --EVEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTW 367
EV ++ K+ G D F++ P + D +R L
Sbjct: 82 PMEVVLLKKVSS----GFSGVIRLLDWFERPDSFVLILERPE-PVQDLFDFITERGALQE 136
Query: 368 PQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLD-SELNAKVADFG---LAKQSLE 423
+ V + + + H G+ HRDIK NIL+D + K+ DFG L K +
Sbjct: 137 ELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 191
Query: 424 GHSHLTTRVAGTFGYLAPEYALYGQLTEKS-DVYSFGIVILELMSG 468
+ T GT Y PE+ Y + +S V+S GI++ +++ G
Sbjct: 192 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 31/229 (13%)
Query: 256 VSELEQATNGFSQNNLIGQGASGIVYKGTLRHGNLVAVKQILDLDTKGDEDFTNEVEIIS 315
V E++ F +IG+GA G V +++ + +IL N+ E++
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL-----------NKWEMLK 130
Query: 316 KIRHRNLLSLRGCCVTSD----------DSSGKRRFLVYDYMPNGTLSDNISISHKRKQL 365
+ R V D +LV DY G L +S +L
Sbjct: 131 RAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLL--TLLSKFEDKL 188
Query: 366 TWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGH 425
+ I ++ I +H + HRDIK N+LLD + ++ADFG + +
Sbjct: 189 PEDMARFYIGEMVLAIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG 245
Query: 426 SHLTTRVAGTFGYLAPEYAL-----YGQLTEKSDVYSFGIVILELMSGR 469
+ ++ GT Y++PE G+ + D +S G+ + E++ G
Sbjct: 246 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 36/152 (23%)
Query: 365 LTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNA-KVADFGLAKQSLE 423
L++ + ++ ++++ K + +H + GI HRD+K +N L + L + DFGLA+ + +
Sbjct: 114 LSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170
Query: 424 GHSHLTTRV---------------------------AGTFGYLAPEYALY-GQLTEKSDV 455
L V AGT G+ APE T D+
Sbjct: 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDM 230
Query: 456 YSFGIVILELMSGR----KVLDTSTSPFQLIT 483
+S G++ L L+SGR K D T+ Q++T
Sbjct: 231 WSAGVIFLSLLSGRYPFYKASDDLTALAQIMT 262
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 379 KGIAYLHYGLKPGIYHRDIKSTNILLDSE-LNAKVADFGLA---KQSLEGHSHLTTR-VA 433
+G+ YLH I H D+K+ N+LL S+ +A + DFG A + G S LT +
Sbjct: 196 EGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP 252
Query: 434 GTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSG 468
GT ++APE L K DV+S ++L +++G
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Query: 359 SHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNA--KVADFG 416
+K + + P +K + + + LH K I H D+K NILL + + KV DFG
Sbjct: 191 KNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
Query: 417 LAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTST 476
S H + T + F Y APE L + D++S G ++ EL++G +L
Sbjct: 248 ---SSCYEHQRVYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303
Query: 477 SPFQL 481
QL
Sbjct: 304 EGDQL 308
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Query: 359 SHKRKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLDSELNA--KVADFG 416
+K + + P +K + + + LH K I H D+K NILL + + KV DFG
Sbjct: 191 KNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
Query: 417 LAKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKSDVYSFGIVILELMSGRKVLDTST 476
S H + T + F Y APE L + D++S G ++ EL++G +L
Sbjct: 248 ---SSCYEHQRVYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303
Query: 477 SPFQL 481
QL
Sbjct: 304 EGDQL 308
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
V + + + +LV + +P LSD ++ + R+KI+ + + +A L
Sbjct: 306 AVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEID------REKILGSLLRSLAALE--- 356
Query: 389 KPGIYHRDIKSTNILLDSELNAKVADFG 416
K G +H D++ N+++D+ +A++ DFG
Sbjct: 357 KQGFWHDDVRPWNVMVDARQHARLIDFG 384
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 329 CVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYLHYGL 388
V + + + +LV + +P LSD ++ + R+KI+ + + +A L
Sbjct: 306 AVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEID------REKILGSLLRSLAALE--- 356
Query: 389 KPGIYHRDIKSTNILLDSELNAKVADFG 416
K G +H D++ N+++D+ +A++ DFG
Sbjct: 357 KQGFWHDDVRPWNVMVDARQHARLIDFG 384
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 271 LIGQGASGIVYKGTLRH---GNLVAVKQILDLDTKGDEDFT---NEVEIISKIRHRNLLS 324
+IG+G ++ R+ G V V++I +L+ +E T E+ + H N++
Sbjct: 16 VIGKGFEDLMTVNLARYKPTGEYVTVRRI-NLEACSNEMVTFLQGELHVSKLFNHPNIVP 74
Query: 325 LRGCCVTSDDSSGKRRFLVYDYMPNGTLSDNISISHKRKQLTWPQRKKIIVDVAKGIAYL 384
R + ++ ++V +M G+ D I +H + I+ V K + Y+
Sbjct: 75 YRATFIADNE-----LWVVTSFMAYGSAKDLI-CTHFMDGMNELAIAYILQGVLKALDYI 128
Query: 385 HYGLKPGIYHRDIKSTNILLDSELNAKVADFGLAKQSLEGHSH-LTTRVAGTFG------ 437
H+ G HR +K+++IL+ ++ KV GL + +L SH RV F
Sbjct: 129 HHM---GYVHRSVKASHILIS--VDGKVYLSGL-RSNLSMISHGQRQRVVHDFPKYSVKV 182
Query: 438 --YLAPEYALYGQLT---EKSDVYSFGIVILELMSGR 469
+L+PE L L KSD+YS GI EL +G
Sbjct: 183 LPWLSPE-VLQQNLQGYDAKSDIYSVGITACELANGH 218
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 90/232 (38%), Gaps = 44/232 (18%)
Query: 258 ELEQATNGFSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFTN------E 310
E E + + L+G G G VY G NL VA+K + + N E
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 76
Query: 311 VEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNG---------TLSDNISISHK 361
V ++ K+ S SG R L + P+ + D +
Sbjct: 77 VVLLKKV--------------SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE 122
Query: 362 RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLD-SELNAKVADFG---L 417
R L + V + + + H G+ HRDIK NIL+D + K+ DFG L
Sbjct: 123 RGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 179
Query: 418 AKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKS-DVYSFGIVILELMSG 468
K + + T GT Y PE+ Y + +S V+S GI++ +++ G
Sbjct: 180 LKDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 90/232 (38%), Gaps = 44/232 (18%)
Query: 258 ELEQATNGFSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFTN------E 310
E E + + L+G G G VY G NL VA+K + + N E
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 104
Query: 311 VEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNG---------TLSDNISISHK 361
V ++ K+ S SG R L + P+ + D +
Sbjct: 105 VVLLKKV--------------SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE 150
Query: 362 RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLD-SELNAKVADFG---L 417
R L + V + + + H G+ HRDIK NIL+D + K+ DFG L
Sbjct: 151 RGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 207
Query: 418 AKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKS-DVYSFGIVILELMSG 468
K + + T GT Y PE+ Y + +S V+S GI++ +++ G
Sbjct: 208 LKDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 90/232 (38%), Gaps = 44/232 (18%)
Query: 258 ELEQATNGFSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFTN------E 310
E E + + L+G G G VY G NL VA+K + + N E
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 76
Query: 311 VEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNG---------TLSDNISISHK 361
V ++ K+ S SG R L + P+ + D +
Sbjct: 77 VVLLKKV--------------SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE 122
Query: 362 RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLD-SELNAKVADFG---L 417
R L + V + + + H G+ HRDIK NIL+D + K+ DFG L
Sbjct: 123 RGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 179
Query: 418 AKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKS-DVYSFGIVILELMSG 468
K + + T GT Y PE+ Y + +S V+S GI++ +++ G
Sbjct: 180 LKDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 90/232 (38%), Gaps = 44/232 (18%)
Query: 258 ELEQATNGFSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFTN------E 310
E E + + L+G G G VY G NL VA+K + + N E
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 311 VEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNG---------TLSDNISISHK 361
V ++ K+ S SG R L + P+ + D +
Sbjct: 78 VVLLKKV--------------SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE 123
Query: 362 RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLD-SELNAKVADFG---L 417
R L + V + + + H G+ HRDIK NIL+D + K+ DFG L
Sbjct: 124 RGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 180
Query: 418 AKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKS-DVYSFGIVILELMSG 468
K + + T GT Y PE+ Y + +S V+S GI++ +++ G
Sbjct: 181 LKDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 90/232 (38%), Gaps = 44/232 (18%)
Query: 258 ELEQATNGFSQNNLIGQGASGIVYKGTLRHGNL-VAVKQILDLDTKGDEDFTN------E 310
E E + + L+G G G VY G NL VA+K + + N E
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 311 VEIISKIRHRNLLSLRGCCVTSDDSSGKRRFLVYDYMPNG---------TLSDNISISHK 361
V ++ K+ S SG R L + P+ + D +
Sbjct: 78 VVLLKKV--------------SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE 123
Query: 362 RKQLTWPQRKKIIVDVAKGIAYLHYGLKPGIYHRDIKSTNILLD-SELNAKVADFG---L 417
R L + V + + + H G+ HRDIK NIL+D + K+ DFG L
Sbjct: 124 RGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL 180
Query: 418 AKQSLEGHSHLTTRVAGTFGYLAPEYALYGQLTEKS-DVYSFGIVILELMSG 468
K + + T GT Y PE+ Y + +S V+S GI++ +++ G
Sbjct: 181 LKDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,496,168
Number of Sequences: 62578
Number of extensions: 603869
Number of successful extensions: 3759
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 229
Number of HSP's that attempted gapping in prelim test: 1539
Number of HSP's gapped (non-prelim): 1118
length of query: 590
length of database: 14,973,337
effective HSP length: 104
effective length of query: 486
effective length of database: 8,465,225
effective search space: 4114099350
effective search space used: 4114099350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)