Query 046275
Match_columns 1176
No_of_seqs 1174 out of 7191
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 18:12:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046275.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046275hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 2.9E-95 1E-99 929.8 48.7 730 24-756 8-752 (768)
2 3rgz_A Protein brassinosteroid 100.0 5.3E-66 1.8E-70 659.5 39.6 597 88-724 95-744 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 7.6E-58 2.6E-62 579.0 42.6 568 93-746 25-624 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 2.5E-56 8.5E-61 565.1 45.1 588 56-726 4-627 (680)
5 3t6q_A CD180 antigen; protein- 100.0 5.5E-55 1.9E-59 545.3 39.6 516 120-726 34-565 (606)
6 3j0a_A TOLL-like receptor 5; m 100.0 1.1E-52 3.9E-57 542.0 43.2 557 98-754 9-590 (844)
7 3vq2_A TLR4, TOLL-like recepto 100.0 4.5E-53 1.5E-57 528.0 37.6 528 96-726 14-563 (606)
8 3t6q_A CD180 antigen; protein- 100.0 2.1E-52 7.2E-57 521.9 40.8 526 123-745 16-561 (606)
9 4eco_A Uncharacterized protein 100.0 4.5E-54 1.5E-58 536.7 22.2 444 27-564 29-532 (636)
10 3vq2_A TLR4, TOLL-like recepto 100.0 3.1E-52 1.1E-56 520.4 36.2 509 93-701 32-562 (606)
11 3j0a_A TOLL-like receptor 5; m 100.0 2.5E-51 8.5E-56 529.5 43.7 528 122-749 7-565 (844)
12 4ecn_A Leucine-rich repeat pro 100.0 7.9E-53 2.7E-57 532.5 23.0 540 26-721 267-864 (876)
13 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-50 4.6E-55 452.0 18.1 264 860-1142 13-292 (299)
14 2z63_A TOLL-like receptor 4, v 100.0 1.2E-48 4.1E-53 484.5 36.5 492 119-728 28-538 (570)
15 4aoj_A High affinity nerve gro 100.0 6.6E-50 2.2E-54 452.8 22.6 263 860-1141 41-321 (329)
16 2z63_A TOLL-like receptor 4, v 100.0 4.6E-48 1.6E-52 479.2 33.2 492 93-702 28-536 (570)
17 4gt4_A Tyrosine-protein kinase 100.0 2.8E-49 9.6E-54 443.3 20.0 258 861-1137 27-304 (308)
18 2z81_A CD282 antigen, TOLL-lik 100.0 1.8E-48 6E-53 480.6 29.0 485 147-728 7-517 (549)
19 3omv_A RAF proto-oncogene seri 100.0 6.3E-49 2.1E-53 438.1 21.5 262 860-1141 36-302 (307)
20 4aw0_A HPDK1, 3-phosphoinositi 100.0 8.5E-49 2.9E-53 435.5 21.3 261 860-1144 32-298 (311)
21 4fih_A Serine/threonine-protei 100.0 3E-48 1E-52 437.7 25.4 250 860-1133 74-324 (346)
22 2z81_A CD282 antigen, TOLL-lik 100.0 1.7E-47 5.8E-52 471.8 34.4 466 119-701 26-514 (549)
23 4g3f_A NF-kappa-beta-inducing 100.0 3.1E-48 1.1E-52 436.4 23.9 257 860-1142 58-319 (336)
24 4b9d_A Serine/threonine-protei 100.0 2E-48 6.7E-53 439.9 20.7 251 860-1133 24-277 (350)
25 3fpq_A Serine/threonine-protei 100.0 1.4E-47 4.7E-52 424.2 24.3 247 863-1133 29-283 (290)
26 4fie_A Serine/threonine-protei 100.0 3.8E-47 1.3E-51 439.3 26.4 250 860-1133 151-401 (423)
27 3hyh_A Carbon catabolite-derep 100.0 4E-47 1.4E-51 416.6 23.4 246 860-1133 13-263 (275)
28 4ase_A Vascular endothelial gr 100.0 1.1E-47 3.7E-52 438.0 19.6 268 856-1141 60-349 (353)
29 2z7x_B TOLL-like receptor 1, v 100.0 2.6E-47 8.7E-52 466.7 21.5 454 149-725 4-485 (520)
30 4eco_A Uncharacterized protein 100.0 5.9E-47 2E-51 472.5 23.3 452 219-745 82-601 (636)
31 3hmm_A TGF-beta receptor type- 100.0 1.3E-46 4.3E-51 423.2 22.7 268 861-1142 4-300 (303)
32 3ubd_A Ribosomal protein S6 ki 100.0 4.8E-47 1.6E-51 421.8 14.3 242 860-1127 24-271 (304)
33 4g8a_A TOLL-like receptor 4; l 100.0 3.7E-44 1.3E-48 450.2 33.4 509 119-722 52-581 (635)
34 2z7x_B TOLL-like receptor 1, v 100.0 5.7E-45 2E-49 445.8 25.3 432 218-745 21-482 (520)
35 4ecn_A Leucine-rich repeat pro 100.0 2.7E-45 9.1E-50 463.9 22.1 415 241-726 323-823 (876)
36 4g31_A Eukaryotic translation 100.0 2.7E-45 9.3E-50 410.0 19.2 252 860-1133 5-280 (299)
37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.6E-45 2.9E-49 448.1 22.1 461 147-726 33-515 (562)
38 4g8a_A TOLL-like receptor 4; l 100.0 5E-42 1.7E-46 430.8 37.1 513 145-745 52-581 (635)
39 4f9c_A Cell division cycle 7-r 100.0 4.5E-43 1.5E-47 402.9 23.1 202 856-1069 17-251 (361)
40 4b99_A Mitogen-activated prote 100.0 7.8E-43 2.7E-47 405.1 23.3 265 859-1133 53-345 (398)
41 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.8E-42 6.3E-47 427.3 25.8 454 122-701 34-514 (562)
42 3v5w_A G-protein coupled recep 100.0 8.2E-43 2.8E-47 419.9 21.4 249 860-1133 189-450 (689)
43 3uto_A Twitchin; kinase, muscl 100.0 1E-41 3.6E-46 415.6 24.1 252 860-1133 157-411 (573)
44 2qkw_B Protein kinase; three-h 100.0 8.7E-42 3E-46 390.1 21.0 287 850-1141 29-317 (321)
45 3v47_A TOLL-like receptor 5B a 100.0 6.8E-41 2.3E-45 402.6 27.9 362 301-730 30-417 (455)
46 3uim_A Brassinosteroid insensi 100.0 3.6E-41 1.2E-45 386.0 22.6 288 847-1137 17-309 (326)
47 1jl5_A Outer protein YOPM; leu 100.0 1.6E-40 5.4E-45 396.2 27.8 376 218-726 11-416 (454)
48 3v47_A TOLL-like receptor 5B a 100.0 5.3E-40 1.8E-44 394.8 28.8 386 221-702 13-413 (455)
49 1jl5_A Outer protein YOPM; leu 100.0 2.6E-40 9.1E-45 394.3 25.9 242 91-387 9-250 (454)
50 3fxz_A Serine/threonine-protei 100.0 4.1E-40 1.4E-44 371.5 23.2 251 859-1133 19-270 (297)
51 3s95_A LIMK-1, LIM domain kina 100.0 4.9E-40 1.7E-44 373.7 22.7 262 860-1141 10-284 (310)
52 2nru_A Interleukin-1 receptor- 100.0 7.1E-39 2.4E-43 363.6 28.4 283 847-1139 12-306 (307)
53 3fe3_A MAP/microtubule affinit 100.0 2E-39 6.9E-44 370.2 22.3 248 859-1133 14-265 (328)
54 2psq_A Fibroblast growth facto 100.0 1.8E-39 6E-44 377.7 21.7 263 859-1140 80-365 (370)
55 3p86_A Serine/threonine-protei 100.0 4.7E-39 1.6E-43 364.7 24.3 263 859-1143 36-302 (309)
56 3zgw_A Maternal embryonic leuc 100.0 2.3E-39 7.7E-44 371.8 21.6 251 858-1133 8-261 (347)
57 2c30_A Serine/threonine-protei 100.0 1.9E-38 6.5E-43 361.9 29.0 262 848-1133 23-295 (321)
58 3soc_A Activin receptor type-2 100.0 2.3E-39 7.9E-44 369.9 20.5 270 860-1141 24-320 (322)
59 3tki_A Serine/threonine-protei 100.0 1.7E-39 5.7E-44 370.9 19.0 254 859-1133 6-262 (323)
60 3bz5_A Internalin-J, INLJ; leu 100.0 1.5E-38 5.2E-43 379.5 27.7 308 301-726 85-392 (457)
61 2yab_A Death-associated protei 100.0 1.2E-38 4.2E-43 368.0 26.1 252 859-1133 11-273 (361)
62 4eqm_A Protein kinase; transfe 100.0 9.5E-39 3.3E-43 359.8 24.3 265 859-1143 10-279 (294)
63 4hcu_A Tyrosine-protein kinase 100.0 3.8E-39 1.3E-43 358.4 20.5 257 860-1140 10-267 (269)
64 1o6l_A RAC-beta serine/threoni 100.0 1.1E-38 3.8E-43 365.0 24.3 248 860-1133 5-261 (337)
65 3kul_A Ephrin type-A receptor 100.0 5.2E-39 1.8E-43 367.2 20.0 262 860-1143 49-317 (325)
66 3sxs_A Cytoplasmic tyrosine-pr 100.0 8.8E-39 3E-43 355.2 21.2 258 859-1140 7-265 (268)
67 3cbl_A C-FES, proto-oncogene t 100.0 2.4E-39 8.4E-44 377.9 17.4 259 860-1140 114-375 (377)
68 3tt0_A Basic fibroblast growth 100.0 1E-38 3.5E-43 373.5 22.0 271 859-1148 68-361 (382)
69 3lb7_A RAF proto-oncogene seri 100.0 1.7E-38 5.7E-43 360.0 23.1 262 860-1141 36-302 (307)
70 3vhe_A Vascular endothelial gr 100.0 3.3E-39 1.1E-43 375.0 17.4 270 852-1139 14-355 (359)
71 3q4u_A Activin receptor type-1 100.0 3E-38 1E-42 357.3 24.1 262 859-1137 7-300 (301)
72 3ugc_A Tyrosine-protein kinase 100.0 1.6E-38 5.5E-43 358.5 20.9 265 860-1141 10-293 (295)
73 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-37 4.2E-42 371.6 29.5 360 164-706 37-396 (457)
74 2y0a_A Death-associated protei 100.0 4.9E-38 1.7E-42 359.3 24.5 251 860-1133 11-272 (326)
75 3c0i_A Peripheral plasma membr 100.0 2.7E-38 9.3E-43 365.3 22.4 255 860-1133 24-287 (351)
76 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.4E-38 4.7E-43 366.8 19.7 249 859-1133 22-281 (353)
77 4dc2_A Protein kinase C IOTA t 100.0 3.7E-38 1.2E-42 367.2 23.4 253 860-1133 52-319 (396)
78 1luf_A Muscle-specific tyrosin 100.0 1.1E-38 3.8E-43 368.1 18.7 266 858-1142 45-338 (343)
79 4fr4_A YANK1, serine/threonine 100.0 2.9E-38 1E-42 366.8 22.3 249 860-1132 15-271 (384)
80 4euu_A Serine/threonine-protei 100.0 9.7E-38 3.3E-42 356.2 26.2 271 860-1138 9-308 (319)
81 2ivs_A Proto-oncogene tyrosine 100.0 1.7E-38 5.7E-43 361.8 19.8 263 859-1140 22-312 (314)
82 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.2E-38 1.1E-42 360.8 22.2 246 860-1133 9-259 (336)
83 3l9p_A Anaplastic lymphoma kin 100.0 5.5E-39 1.9E-43 373.3 16.0 263 860-1141 71-347 (367)
84 3poz_A Epidermal growth factor 100.0 2E-38 6.9E-43 363.0 20.2 257 860-1139 15-278 (327)
85 3op5_A Serine/threonine-protei 100.0 2E-38 6.7E-43 368.9 20.4 274 858-1145 33-335 (364)
86 2qol_A Ephrin receptor; recept 100.0 1.3E-38 4.5E-43 370.6 18.8 260 860-1141 45-311 (373)
87 3gen_A Tyrosine-protein kinase 100.0 2.4E-38 8.3E-43 354.7 20.2 258 859-1140 23-281 (283)
88 1tki_A Titin; serine kinase, m 100.0 6E-38 2.1E-42 357.5 23.7 252 859-1133 4-258 (321)
89 3kex_A Receptor tyrosine-prote 100.0 2.9E-38 1E-42 361.4 21.1 257 860-1139 13-276 (325)
90 1t46_A HOMO sapiens V-KIT hard 100.0 3E-38 1E-42 359.4 20.4 266 859-1142 22-310 (313)
91 1rjb_A FL cytokine receptor; k 100.0 2.7E-38 9.1E-43 365.1 20.1 266 859-1142 44-337 (344)
92 1fot_A TPK1 delta, CAMP-depend 100.0 6.8E-38 2.3E-42 355.9 22.9 245 860-1133 6-259 (318)
93 2bdw_A Hypothetical protein K1 100.0 7.1E-38 2.4E-42 362.9 23.4 252 859-1133 28-285 (362)
94 3qup_A Tyrosine-protein kinase 100.0 4.3E-38 1.5E-42 359.9 21.3 267 858-1143 21-302 (323)
95 3dtc_A Mitogen-activated prote 100.0 7E-38 2.4E-42 348.5 22.1 253 860-1137 7-271 (271)
96 1kob_A Twitchin; kinase, intra 100.0 8E-38 2.8E-42 364.5 23.5 253 859-1133 50-305 (387)
97 3niz_A Rhodanese family protei 100.0 1E-37 3.6E-42 354.3 23.8 265 859-1133 20-301 (311)
98 3soa_A Calcium/calmodulin-depe 100.0 1E-37 3.6E-42 369.8 24.7 254 858-1133 9-268 (444)
99 3v8s_A RHO-associated protein 100.0 1.3E-38 4.5E-43 373.1 16.8 258 854-1133 63-330 (410)
100 2izr_A Casein kinase I isoform 100.0 8.1E-38 2.8E-42 358.6 22.7 266 859-1144 8-286 (330)
101 1xjd_A Protein kinase C, theta 100.0 3E-38 1E-42 362.4 19.0 251 857-1133 14-270 (345)
102 1qcf_A Haematopoetic cell kina 100.0 3.2E-38 1.1E-42 377.7 19.9 261 859-1143 187-448 (454)
103 2buj_A Serine/threonine-protei 100.0 2.8E-38 9.7E-43 360.4 18.5 270 859-1145 28-312 (317)
104 3uc3_A Serine/threonine-protei 100.0 8.9E-38 3E-42 362.1 22.9 253 859-1133 19-275 (361)
105 1csn_A Casein kinase-1; phosph 100.0 2E-37 7E-42 349.9 25.4 267 859-1143 9-287 (298)
106 3t9t_A Tyrosine-protein kinase 100.0 5.2E-38 1.8E-42 348.7 19.8 257 860-1140 8-265 (267)
107 3a8x_A Protein kinase C IOTA t 100.0 8.8E-38 3E-42 359.3 22.3 253 860-1133 9-276 (345)
108 4aw2_A Serine/threonine-protei 100.0 1.8E-38 6.1E-43 374.8 16.8 263 852-1133 66-339 (437)
109 2zv2_A Calcium/calmodulin-depe 100.0 9.6E-38 3.3E-42 352.6 21.9 249 860-1133 13-293 (298)
110 2wqm_A Serine/threonine-protei 100.0 9.9E-38 3.4E-42 354.7 22.0 267 859-1143 31-301 (310)
111 4fvq_A Tyrosine-protein kinase 100.0 7.6E-38 2.6E-42 351.8 20.3 255 860-1144 8-280 (289)
112 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.3E-37 4.3E-42 358.6 22.3 245 860-1133 41-294 (350)
113 3o0g_A Cell division protein k 100.0 1.8E-37 6E-42 349.4 22.9 261 860-1133 2-283 (292)
114 2eva_A TAK1 kinase - TAB1 chim 100.0 9.5E-38 3.3E-42 354.0 20.7 260 860-1144 8-268 (307)
115 3mdy_A Bone morphogenetic prot 100.0 8.6E-37 2.9E-41 351.4 29.0 273 856-1142 33-334 (337)
116 3dbq_A Dual specificity protei 100.0 3E-38 1E-42 364.2 16.8 253 859-1134 8-275 (343)
117 3og7_A AKAP9-BRAF fusion prote 100.0 1.1E-37 3.6E-42 350.6 20.8 261 859-1139 23-288 (289)
118 2i0e_A Protein kinase C-beta I 100.0 1.2E-37 4.2E-42 358.5 21.9 249 859-1133 19-277 (353)
119 4f0f_A Serine/threonine-protei 100.0 2.2E-37 7.4E-42 347.7 23.4 252 860-1137 19-287 (287)
120 2pvf_A Fibroblast growth facto 100.0 9.8E-38 3.3E-42 358.6 20.9 265 859-1142 34-321 (334)
121 2yex_A Serine/threonine-protei 100.0 7.7E-38 2.6E-42 349.2 19.5 254 859-1133 6-262 (276)
122 1b6c_B TGF-B superfamily recep 100.0 6.1E-37 2.1E-41 353.4 27.3 275 851-1142 33-339 (342)
123 1k9a_A Carboxyl-terminal SRC k 100.0 2.2E-37 7.6E-42 369.7 24.4 253 859-1140 192-446 (450)
124 3f3z_A Calcium/calmodulin-depe 100.0 3.5E-37 1.2E-41 344.1 24.3 251 859-1133 8-262 (277)
125 1mp8_A Focal adhesion kinase 1 100.0 7.8E-38 2.7E-42 350.1 18.8 257 859-1139 14-276 (281)
126 1ob3_A PFPK5, cell division co 100.0 1.7E-37 5.9E-42 348.6 21.6 261 860-1133 2-281 (288)
127 2w4o_A Calcium/calmodulin-depe 100.0 1.9E-37 6.6E-42 357.7 22.5 252 858-1133 51-306 (349)
128 3a62_A Ribosomal protein S6 ki 100.0 2E-37 7E-42 354.4 22.3 248 860-1133 17-277 (327)
129 3is5_A Calcium-dependent prote 100.0 9.3E-38 3.2E-42 350.2 19.1 253 860-1133 22-279 (285)
130 2vd5_A DMPK protein; serine/th 100.0 3.5E-38 1.2E-42 369.8 16.2 262 852-1133 53-328 (412)
131 3lzb_A Epidermal growth factor 100.0 1.5E-37 5E-42 355.6 20.9 258 860-1140 15-279 (327)
132 2xir_A Vascular endothelial gr 100.0 5.8E-38 2E-42 357.7 17.4 270 854-1141 21-312 (316)
133 1o6v_A Internalin A; bacterial 100.0 1.1E-36 3.9E-41 366.3 29.6 300 217-557 45-344 (466)
134 3ork_A Serine/threonine protei 100.0 1.2E-37 4E-42 354.2 19.6 271 859-1150 11-292 (311)
135 2a2a_A Death-associated protei 100.0 5.5E-37 1.9E-41 350.3 25.3 251 860-1133 12-273 (321)
136 2r5t_A Serine/threonine-protei 100.0 1.6E-37 5.6E-42 360.0 21.0 254 860-1139 38-296 (373)
137 3gni_B Strad alpha; kinase fol 100.0 2.6E-37 8.8E-42 363.0 22.8 206 859-1069 24-241 (389)
138 2x4f_A Myosin light chain kina 100.0 2.4E-37 8.1E-42 359.8 21.9 247 865-1133 94-343 (373)
139 3kmu_A ILK, integrin-linked ki 100.0 2.3E-37 7.8E-42 344.2 20.7 252 860-1139 10-270 (271)
140 2acx_A G protein-coupled recep 100.0 2.5E-37 8.5E-42 373.0 22.7 254 859-1133 183-445 (576)
141 1u59_A Tyrosine-protein kinase 100.0 1.6E-37 5.6E-42 348.7 19.5 263 860-1145 9-278 (287)
142 2i1m_A Macrophage colony-stimu 100.0 1.2E-37 4.3E-42 357.7 18.8 263 859-1139 45-326 (333)
143 2pmi_A Negative RE, cyclin-dep 100.0 4.5E-37 1.5E-41 350.1 23.2 268 859-1133 4-294 (317)
144 2zmd_A Dual specificity protei 100.0 9.8E-38 3.4E-42 365.5 18.2 251 860-1133 56-321 (390)
145 3kn6_A Ribosomal protein S6 ki 100.0 2.4E-37 8.1E-42 353.4 20.9 249 865-1133 16-271 (325)
146 3fdn_A Serine/threonine-protei 100.0 2.8E-37 9.5E-42 345.3 20.9 247 859-1133 8-258 (279)
147 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.4E-37 4.8E-42 371.7 19.7 260 860-1143 184-444 (452)
148 2a19_B Interferon-induced, dou 100.0 2.3E-37 8E-42 346.8 20.3 255 858-1145 9-280 (284)
149 3p1a_A MYT1 kinase, membrane-a 100.0 2.5E-37 8.5E-42 351.3 20.7 245 860-1133 57-305 (311)
150 1qpc_A LCK kinase; alpha beta 100.0 3.1E-37 1.1E-41 344.9 21.1 259 860-1142 13-272 (279)
151 2eue_A Carbon catabolite derep 100.0 2.3E-37 7.8E-42 345.2 19.9 246 860-1133 13-263 (275)
152 2ac3_A MAP kinase-interacting 100.0 3.5E-37 1.2E-41 351.2 21.9 259 860-1133 12-296 (316)
153 4eut_A Serine/threonine-protei 100.0 4.1E-37 1.4E-41 361.6 23.1 273 860-1140 9-310 (396)
154 4e5w_A Tyrosine-protein kinase 100.0 3E-37 1E-41 349.4 21.1 262 860-1138 21-301 (302)
155 3lxl_A Tyrosine-protein kinase 100.0 1.7E-37 5.7E-42 355.6 19.2 268 860-1144 23-308 (327)
156 2jii_A Serine/threonine-protei 100.0 2.8E-37 9.6E-42 357.5 21.2 268 859-1144 41-341 (352)
157 3kk8_A Calcium/calmodulin depe 100.0 1.3E-36 4.4E-41 340.8 25.9 252 859-1133 5-262 (284)
158 2qr7_A Ribosomal protein S6 ki 100.0 2.7E-37 9.2E-42 354.8 20.7 252 859-1133 21-278 (342)
159 1p4o_A Insulin-like growth fac 100.0 6.5E-38 2.2E-42 358.3 15.5 266 856-1140 21-300 (322)
160 4ejn_A RAC-alpha serine/threon 100.0 1.5E-37 5.2E-42 371.3 19.3 249 859-1133 147-405 (446)
161 3cc6_A Protein tyrosine kinase 100.0 2.8E-37 9.6E-42 345.6 20.2 257 859-1139 11-273 (281)
162 3hko_A Calcium/calmodulin-depe 100.0 4.8E-37 1.6E-41 354.8 22.7 263 855-1133 21-331 (345)
163 2y94_A 5'-AMP-activated protei 100.0 3.4E-37 1.2E-41 367.6 22.0 247 860-1133 16-267 (476)
164 2v62_A Serine/threonine-protei 100.0 1.6E-37 5.5E-42 358.4 18.5 267 859-1140 36-329 (345)
165 1opk_A P150, C-ABL, proto-onco 100.0 1E-37 3.5E-42 376.8 17.6 258 860-1140 220-479 (495)
166 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.3E-37 1.8E-41 369.7 23.3 256 860-1133 185-449 (543)
167 3f66_A Hepatocyte growth facto 100.0 6.9E-37 2.4E-41 345.6 22.8 262 860-1143 25-295 (298)
168 1ogq_A PGIP-2, polygalacturona 100.0 4.5E-37 1.5E-41 348.9 21.4 42 24-65 2-45 (313)
169 3qd2_B Eukaryotic translation 100.0 3.3E-37 1.1E-41 354.0 20.4 253 859-1133 5-326 (332)
170 1fvr_A Tyrosine-protein kinase 100.0 6.6E-37 2.3E-41 350.6 22.8 264 860-1145 25-306 (327)
171 3pls_A Macrophage-stimulating 100.0 8.4E-37 2.9E-41 344.9 23.0 263 861-1144 22-292 (298)
172 2h34_A Serine/threonine-protei 100.0 7.5E-37 2.6E-41 347.0 22.5 261 859-1141 33-298 (309)
173 3brb_A Proto-oncogene tyrosine 100.0 4.1E-37 1.4E-41 350.1 20.4 264 858-1140 32-309 (313)
174 3uzp_A CKI-delta, CKID, casein 100.0 2.7E-36 9.2E-41 340.4 26.9 266 859-1144 8-285 (296)
175 1nxk_A MAP kinase-activated pr 100.0 9.6E-37 3.3E-41 358.2 23.8 251 860-1134 61-323 (400)
176 3gxj_A TGF-beta receptor type- 100.0 1E-38 3.5E-43 361.5 6.7 267 859-1142 2-300 (303)
177 4hgt_A Casein kinase I isoform 100.0 1.6E-36 5.6E-41 342.1 24.7 267 858-1144 7-285 (296)
178 2id5_A Lingo-1, leucine rich r 100.0 1E-36 3.5E-41 368.3 24.2 347 304-748 14-360 (477)
179 3bhy_A Death-associated protei 100.0 3.1E-36 1.1E-40 337.5 26.1 258 860-1140 5-275 (283)
180 1u5q_A Serine/threonine protei 100.0 6.3E-37 2.2E-41 352.9 21.0 248 860-1135 54-308 (348)
181 3c1x_A Hepatocyte growth facto 100.0 3.9E-37 1.3E-41 357.7 19.3 263 861-1145 90-361 (373)
182 3llt_A Serine/threonine kinase 100.0 5.1E-37 1.7E-41 356.7 20.1 210 848-1069 23-263 (360)
183 3oz6_A Mitogen-activated prote 100.0 4.9E-37 1.7E-41 360.3 20.1 204 857-1069 6-235 (388)
184 3eqc_A Dual specificity mitoge 100.0 8.7E-37 3E-41 354.6 21.8 200 860-1069 33-234 (360)
185 2jam_A Calcium/calmodulin-depe 100.0 1.5E-36 5.2E-41 343.8 23.3 251 859-1133 8-262 (304)
186 3ttj_A Mitogen-activated prote 100.0 9.6E-37 3.3E-41 364.6 22.7 258 859-1133 61-356 (464)
187 3g33_A Cell division protein k 100.0 8.8E-37 3E-41 346.5 21.2 266 858-1133 7-297 (308)
188 1t4h_A Serine/threonine-protei 100.0 2.2E-36 7.7E-41 340.0 24.3 247 861-1133 27-283 (290)
189 1xbb_A Tyrosine-protein kinase 100.0 3.7E-37 1.3E-41 346.5 17.8 258 859-1140 15-280 (291)
190 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.2E-36 4.2E-41 353.9 22.8 256 858-1140 63-340 (365)
191 3g2f_A Bone morphogenetic prot 100.0 6.8E-37 2.3E-41 352.0 20.3 275 860-1147 13-326 (336)
192 2w5a_A Serine/threonine-protei 100.0 2.1E-37 7.1E-42 346.3 15.3 258 859-1137 5-272 (279)
193 3lxp_A Non-receptor tyrosine-p 100.0 5.1E-37 1.8E-41 349.9 18.7 263 862-1143 33-314 (318)
194 3ll6_A Cyclin G-associated kin 100.0 7.1E-37 2.4E-41 352.0 19.9 269 860-1152 28-321 (337)
195 1mqb_A Ephrin type-A receptor 100.0 1E-36 3.6E-41 349.6 21.2 260 860-1141 44-311 (333)
196 4agu_A Cyclin-dependent kinase 100.0 1.8E-36 6.2E-41 344.4 22.9 261 860-1133 3-285 (311)
197 2yfx_A Tyrosine-protein kinase 100.0 4E-37 1.4E-41 352.5 17.5 264 859-1141 29-306 (327)
198 3kfa_A Tyrosine-protein kinase 100.0 5E-37 1.7E-41 344.9 17.8 259 859-1140 12-272 (288)
199 2vgo_A Serine/threonine-protei 100.0 1.4E-36 4.9E-41 340.5 21.4 246 860-1133 14-263 (284)
200 1o6v_A Internalin A; bacterial 100.0 1.4E-35 4.8E-40 356.8 31.6 348 144-562 45-392 (466)
201 1x8b_A WEE1HU, WEE1-like prote 100.0 1.4E-36 4.8E-41 341.2 21.3 247 859-1133 10-280 (289)
202 3i6u_A CDS1, serine/threonine- 100.0 1E-36 3.5E-41 360.5 21.2 254 857-1133 132-400 (419)
203 3dls_A PAS domain-containing s 100.0 2.3E-37 7.9E-42 354.9 15.0 243 858-1133 22-275 (335)
204 3cok_A Serine/threonine-protei 100.0 8.2E-37 2.8E-41 341.3 19.1 249 860-1133 11-263 (278)
205 1byg_A CSK, protein (C-termina 100.0 6.8E-37 2.3E-41 341.9 18.0 252 860-1140 21-274 (278)
206 2clq_A Mitogen-activated prote 100.0 1.7E-36 5.8E-41 341.9 21.2 253 861-1133 23-279 (295)
207 2h8h_A Proto-oncogene tyrosine 100.0 4.4E-37 1.5E-41 374.7 17.7 261 859-1143 266-527 (535)
208 1vzo_A Ribosomal protein S6 ki 100.0 8.8E-37 3E-41 353.2 19.3 254 860-1134 54-323 (355)
209 2y7j_A Phosphorylase B kinase 100.0 5.1E-36 1.7E-40 348.1 25.6 256 855-1133 89-360 (365)
210 2rku_A Serine/threonine-protei 100.0 1.8E-36 6.2E-41 341.4 21.2 249 859-1133 14-266 (294)
211 3nsz_A CK II alpha, casein kin 100.0 1.6E-36 5.5E-41 348.0 20.6 256 860-1133 36-320 (330)
212 2w1i_A JAK2; chromosomal rearr 100.0 1.4E-36 4.8E-41 347.7 20.0 263 860-1139 41-322 (326)
213 2owb_A Serine/threonine-protei 100.0 1.8E-36 6.1E-41 348.0 20.5 249 859-1133 40-292 (335)
214 2h6d_A 5'-AMP-activated protei 100.0 3.4E-36 1.2E-40 335.9 22.1 247 860-1133 11-262 (276)
215 2ozo_A Tyrosine-protein kinase 100.0 1.7E-36 5.8E-41 374.7 21.3 258 861-1141 336-600 (613)
216 3a7i_A MST3 kinase, serine/thr 100.0 3.6E-36 1.2E-40 340.6 22.3 250 860-1135 22-273 (303)
217 3mwu_A Calmodulin-domain prote 100.0 4.8E-36 1.6E-40 362.5 24.7 251 859-1133 21-277 (486)
218 3lij_A Calcium/calmodulin depe 100.0 4.6E-36 1.6E-40 363.3 24.4 251 859-1133 36-292 (494)
219 3lm5_A Serine/threonine-protei 100.0 2.2E-36 7.6E-41 346.0 20.4 260 853-1133 21-288 (327)
220 3n9x_A Phosphotransferase; mal 100.0 1.8E-36 6.3E-41 360.0 20.3 200 859-1066 25-253 (432)
221 3fme_A Dual specificity mitoge 100.0 8.3E-37 2.8E-41 343.5 16.4 255 859-1133 6-267 (290)
222 3byv_A Rhoptry kinase; malaria 100.0 3.4E-37 1.2E-41 360.1 13.6 244 859-1133 72-360 (377)
223 3mtl_A Cell division protein k 100.0 5.4E-37 1.8E-41 350.6 15.0 260 860-1133 2-282 (324)
224 3rp9_A Mitogen-activated prote 100.0 3.2E-36 1.1E-40 361.5 22.5 195 859-1061 52-280 (458)
225 2j7t_A Serine/threonine-protei 100.0 3.1E-36 1.1E-40 341.0 20.9 253 859-1133 18-276 (302)
226 1ogq_A PGIP-2, polygalacturona 100.0 8.2E-37 2.8E-41 346.8 16.0 260 424-753 50-313 (313)
227 3nyv_A Calmodulin-domain prote 100.0 2.8E-36 9.5E-41 364.7 21.6 250 860-1133 26-282 (484)
228 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.4E-36 4.9E-41 347.9 17.9 265 858-1133 32-319 (329)
229 3q5i_A Protein kinase; CDPK, m 100.0 8.6E-36 3E-40 361.8 25.6 252 858-1133 34-302 (504)
230 3eb0_A Putative uncharacterize 100.0 2E-36 6.7E-41 354.5 19.3 270 857-1140 4-331 (383)
231 3pg1_A Mitogen-activated prote 100.0 5.2E-36 1.8E-40 348.4 22.6 269 851-1133 13-317 (362)
232 3an0_A Dual specificity mitoge 100.0 1.3E-36 4.4E-41 350.3 16.8 256 858-1133 49-311 (340)
233 2x7f_A TRAF2 and NCK-interacti 100.0 4.2E-36 1.4E-40 343.9 20.5 256 855-1133 19-287 (326)
234 3cek_A Dual specificity protei 100.0 4.8E-37 1.6E-41 349.5 12.6 261 850-1133 18-293 (313)
235 1ua2_A CAK, cell division prot 100.0 4.7E-36 1.6E-40 346.2 21.0 267 857-1133 7-292 (346)
236 4fl3_A Tyrosine-protein kinase 100.0 3.3E-36 1.1E-40 372.9 20.6 250 866-1139 375-631 (635)
237 1u46_A ACK-1, activated CDC42 100.0 3.3E-36 1.1E-40 338.8 18.7 259 860-1140 18-285 (291)
238 3sv0_A Casein kinase I-like; t 100.0 1.9E-35 6.5E-40 353.2 26.3 267 859-1143 6-282 (483)
239 3com_A Serine/threonine-protei 100.0 4.2E-36 1.4E-40 341.9 19.6 252 858-1133 27-279 (314)
240 2wtk_C Serine/threonine-protei 100.0 1.3E-35 4.4E-40 336.4 23.5 252 859-1133 4-264 (305)
241 1cm8_A Phosphorylated MAP kina 100.0 6.3E-36 2.2E-40 347.4 21.1 257 859-1133 24-308 (367)
242 4e7w_A Glycogen synthase kinas 100.0 3.3E-36 1.1E-40 353.3 18.8 266 860-1138 40-329 (394)
243 2xrw_A Mitogen-activated prote 100.0 1.1E-35 3.9E-40 346.3 22.6 257 860-1133 25-319 (371)
244 3pfq_A PKC-B, PKC-beta, protei 100.0 4.9E-36 1.7E-40 374.0 20.8 249 859-1133 340-598 (674)
245 3mi9_A Cell division protein k 100.0 1.4E-35 4.7E-40 343.3 23.0 265 860-1133 17-312 (351)
246 4aaa_A Cyclin-dependent kinase 100.0 4.5E-36 1.5E-40 344.3 18.6 264 860-1133 25-307 (331)
247 2ycf_A Serine/threonine-protei 100.0 6.7E-36 2.3E-40 341.5 19.8 252 859-1133 9-275 (322)
248 2vwi_A Serine/threonine-protei 100.0 1.4E-36 4.6E-41 344.0 13.5 265 858-1133 13-288 (303)
249 1j1b_A Glycogen synthase kinas 100.0 5.8E-36 2E-40 354.1 19.1 264 860-1138 54-344 (420)
250 2r3i_A Cell division protein k 100.0 1E-35 3.5E-40 336.2 20.3 265 860-1133 3-284 (299)
251 1phk_A Phosphorylase kinase; g 100.0 2.1E-35 7.1E-40 333.5 22.7 253 858-1133 15-284 (298)
252 3q60_A ROP5B; pseudokinase, tr 100.0 3.4E-36 1.2E-40 351.0 15.8 253 860-1133 62-353 (371)
253 3qyz_A Mitogen-activated prote 100.0 2E-35 6.8E-40 343.5 21.9 263 858-1133 25-314 (364)
254 2pml_X PFPK7, Ser/Thr protein 100.0 9.8E-36 3.4E-40 344.2 18.5 258 859-1133 30-323 (348)
255 2wei_A Calmodulin-domain prote 100.0 5.9E-35 2E-39 327.8 23.6 252 858-1133 20-277 (287)
256 2id5_A Lingo-1, leucine rich r 100.0 3.7E-35 1.3E-39 354.6 23.5 327 221-564 14-340 (477)
257 3rgf_A Cyclin-dependent kinase 100.0 2.4E-35 8.1E-40 348.0 21.2 203 861-1069 21-240 (405)
258 3e3p_A Protein kinase, putativ 100.0 3E-35 1E-39 341.9 21.5 276 854-1138 17-322 (360)
259 2fst_X Mitogen-activated prote 100.0 7.8E-36 2.7E-40 346.2 16.1 260 859-1133 28-312 (367)
260 1blx_A Cyclin-dependent kinase 100.0 6.5E-35 2.2E-39 334.0 23.0 263 858-1133 9-297 (326)
261 3kvw_A DYRK2, dual specificity 100.0 5.4E-35 1.9E-39 346.6 22.6 199 859-1069 96-303 (429)
262 1zy4_A Serine/threonine-protei 100.0 7.8E-35 2.7E-39 329.4 22.1 253 859-1133 5-284 (303)
263 2j0j_A Focal adhesion kinase 1 100.0 2.2E-35 7.4E-40 366.9 19.0 258 858-1139 388-651 (656)
264 3fhr_A MAP kinase-activated pr 100.0 5.1E-35 1.7E-39 335.8 20.4 253 859-1133 27-288 (336)
265 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.1E-35 3.9E-40 339.2 14.8 259 859-1141 32-304 (319)
266 2vx3_A Dual specificity tyrosi 100.0 9.9E-35 3.4E-39 339.9 22.6 202 858-1069 52-262 (382)
267 4exu_A Mitogen-activated prote 100.0 8.3E-35 2.8E-39 338.9 21.5 256 859-1133 41-324 (371)
268 2b9h_A MAP kinase FUS3, mitoge 100.0 1.1E-34 3.8E-39 336.1 22.3 262 859-1133 10-306 (353)
269 2iwi_A Serine/threonine-protei 100.0 2.3E-35 7.8E-40 335.5 15.9 245 855-1133 26-284 (312)
270 2i6l_A Mitogen-activated prote 100.0 3.7E-35 1.3E-39 335.0 17.5 262 859-1133 10-306 (320)
271 3oja_B Anopheles plasmodium-re 100.0 1.3E-34 4.5E-39 359.0 22.9 336 324-749 50-385 (597)
272 1wak_A Serine/threonine-protei 100.0 8.7E-35 3E-39 342.7 20.1 264 859-1133 36-392 (397)
273 1z57_A Dual specificity protei 100.0 1.7E-34 5.9E-39 332.3 21.6 260 859-1133 13-329 (339)
274 3a99_A Proto-oncogene serine/t 100.0 1.5E-35 5.3E-40 337.9 12.3 244 856-1133 39-294 (320)
275 3o6n_A APL1; leucine-rich repe 100.0 2.9E-34 1E-38 337.2 22.8 334 325-748 45-378 (390)
276 3coi_A Mitogen-activated prote 100.0 2.6E-34 8.9E-39 332.8 21.1 255 860-1133 24-306 (353)
277 2rio_A Serine/threonine-protei 100.0 1.2E-34 4E-39 344.5 18.6 254 861-1133 16-296 (434)
278 3aln_A Dual specificity mitoge 100.0 2E-34 7E-39 330.0 18.9 257 860-1133 22-286 (327)
279 1q8y_A SR protein kinase; tran 100.0 1.5E-34 5.2E-39 337.6 17.8 263 860-1133 19-334 (373)
280 2dyl_A Dual specificity mitoge 100.0 5.7E-34 2E-38 324.9 21.0 251 860-1133 25-284 (318)
281 2eu9_A Dual specificity protei 100.0 7.6E-34 2.6E-38 329.2 21.6 260 859-1133 18-334 (355)
282 3p23_A Serine/threonine-protei 100.0 2E-34 6.9E-39 341.3 16.9 250 860-1133 24-284 (432)
283 3o6n_A APL1; leucine-rich repe 100.0 2.1E-33 7.2E-38 329.8 22.7 315 195-566 44-361 (390)
284 3uqc_A Probable conserved tran 100.0 1.4E-33 4.7E-38 315.7 17.7 231 860-1141 31-267 (286)
285 3qa8_A MGC80376 protein; kinas 100.0 4.1E-34 1.4E-38 347.8 14.0 271 859-1140 13-310 (676)
286 4fmz_A Internalin; leucine ric 100.0 1.3E-32 4.6E-37 317.7 25.7 306 193-557 41-346 (347)
287 3oja_B Anopheles plasmodium-re 100.0 5.3E-33 1.8E-37 344.6 22.7 314 196-566 51-367 (597)
288 4fmz_A Internalin; leucine ric 100.0 2.8E-32 9.5E-37 315.0 26.9 308 164-533 39-346 (347)
289 3dzo_A Rhoptry kinase domain; 100.0 3.3E-33 1.1E-37 329.7 16.0 243 860-1133 78-364 (413)
290 3m2w_A MAP kinase-activated pr 100.0 1.6E-32 5.4E-37 309.9 20.2 229 860-1133 17-257 (299)
291 2pzi_A Probable serine/threoni 100.0 5.4E-33 1.9E-37 349.2 17.7 238 860-1137 80-326 (681)
292 2vuw_A Serine/threonine-protei 100.0 6.6E-33 2.2E-37 318.6 11.6 238 860-1133 20-332 (336)
293 2ft3_A Biglycan; proteoglycan, 100.0 4.2E-31 1.4E-35 302.9 26.4 246 302-562 34-281 (332)
294 1xku_A Decorin; proteoglycan, 100.0 1.1E-30 3.6E-35 299.4 28.4 295 218-554 31-329 (330)
295 1z7x_W Ribonuclease inhibitor; 100.0 6.2E-35 2.1E-39 351.3 -8.2 354 301-718 28-440 (461)
296 1xku_A Decorin; proteoglycan, 100.0 1.1E-30 3.9E-35 299.1 26.7 248 302-563 32-281 (330)
297 2ft3_A Biglycan; proteoglycan, 100.0 6E-31 2E-35 301.7 23.3 289 218-555 33-331 (332)
298 1z7x_W Ribonuclease inhibitor; 100.0 3.9E-34 1.3E-38 344.3 -10.9 385 145-560 3-443 (461)
299 2z80_A TOLL-like receptor 2, v 100.0 1.1E-29 3.9E-34 293.7 14.5 280 374-727 31-320 (353)
300 4fcg_A Uncharacterized protein 100.0 1.1E-28 3.6E-33 281.7 17.1 225 424-721 81-314 (328)
301 2z66_A Variable lymphocyte rec 100.0 2.6E-28 8.8E-33 276.4 19.4 237 326-566 29-270 (306)
302 3ogk_B Coronatine-insensitive 100.0 1.5E-30 5.2E-35 323.5 0.6 440 188-718 65-548 (592)
303 2z66_A Variable lymphocyte rec 100.0 1.8E-28 6E-33 277.7 17.3 174 378-557 11-188 (306)
304 1wwl_A Monocyte differentiatio 100.0 1.7E-29 5.8E-34 286.7 7.4 246 401-723 44-311 (312)
305 4fcg_A Uncharacterized protein 100.0 5.2E-28 1.8E-32 276.0 19.2 234 374-697 81-314 (328)
306 3zyi_A Leucine-rich repeat-con 100.0 1.9E-27 6.6E-32 284.6 22.1 227 425-721 76-303 (452)
307 2z80_A TOLL-like receptor 2, v 100.0 2.5E-28 8.5E-33 282.4 13.9 282 238-562 28-319 (353)
308 3zyj_A Leucine-rich repeat-con 99.9 2.5E-27 8.6E-32 282.6 21.9 247 376-721 45-292 (440)
309 1ozn_A Reticulon 4 receptor; N 99.9 1.1E-27 3.8E-32 268.1 17.5 231 304-563 14-244 (285)
310 1ozn_A Reticulon 4 receptor; N 99.9 2.2E-27 7.5E-32 265.8 18.4 233 425-726 33-266 (285)
311 3g06_A SSPH2 (leucine-rich rep 99.9 1.2E-26 4E-31 284.6 25.4 268 326-708 41-308 (622)
312 3g06_A SSPH2 (leucine-rich rep 99.9 1.3E-26 4.6E-31 284.1 25.9 268 302-684 41-308 (622)
313 3o53_A Protein LRIM1, AGAP0063 99.9 1.5E-28 5E-33 279.6 7.3 267 327-726 12-281 (317)
314 3zyj_A Leucine-rich repeat-con 99.9 1E-26 3.5E-31 277.3 23.1 257 266-566 44-301 (440)
315 3zyi_A Leucine-rich repeat-con 99.9 1.2E-26 4.2E-31 277.6 23.6 237 301-566 75-312 (452)
316 1wwl_A Monocyte differentiatio 99.9 6.7E-29 2.3E-33 281.7 2.7 204 422-698 93-310 (312)
317 3ogk_B Coronatine-insensitive 99.9 3.4E-29 1.1E-33 311.4 -0.4 465 160-727 64-581 (592)
318 3o53_A Protein LRIM1, AGAP0063 99.9 4.3E-28 1.5E-32 275.7 2.0 218 300-557 33-250 (317)
319 3oja_A Leucine-rich immune mol 99.9 6E-27 2E-31 281.9 9.3 234 401-716 35-270 (487)
320 4azs_A Methyltransferase WBDD; 99.9 2.2E-27 7.5E-32 289.4 3.8 185 867-1064 241-437 (569)
321 3oja_A Leucine-rich immune mol 99.9 1.1E-26 3.9E-31 279.4 9.4 216 301-557 34-250 (487)
322 2p1m_B Transport inhibitor res 99.9 5.6E-29 1.9E-33 309.5 -15.0 453 54-556 33-543 (594)
323 2p1m_B Transport inhibitor res 99.9 6.5E-28 2.2E-32 299.9 -9.2 449 172-716 46-539 (594)
324 2z62_A TOLL-like receptor 4, v 99.9 1.7E-24 5.8E-29 241.0 18.3 152 404-558 11-163 (276)
325 2z62_A TOLL-like receptor 4, v 99.9 3.3E-24 1.1E-28 238.6 17.6 227 305-562 11-242 (276)
326 3rfs_A Internalin B, repeat mo 99.9 2.7E-24 9.2E-29 238.6 15.5 139 420-558 81-219 (272)
327 2o6q_A Variable lymphocyte rec 99.9 9E-23 3.1E-27 226.1 23.1 206 326-561 17-222 (270)
328 3en9_A Glycoprotease, O-sialog 99.9 1.7E-24 5.8E-29 262.5 9.8 186 863-1066 339-539 (540)
329 1p9a_G Platelet glycoprotein I 99.9 6.2E-23 2.1E-27 229.5 20.6 211 321-565 6-216 (290)
330 3rfs_A Internalin B, repeat mo 99.9 1.1E-23 3.9E-28 233.6 13.7 205 322-564 38-242 (272)
331 4glp_A Monocyte differentiatio 99.9 9E-24 3.1E-28 239.3 11.3 205 448-722 91-308 (310)
332 3goz_A Leucine-rich repeat-con 99.9 1.1E-24 3.6E-29 252.6 1.9 255 306-561 3-301 (362)
333 1p9a_G Platelet glycoprotein I 99.9 1.1E-22 3.8E-27 227.4 18.2 202 298-533 7-208 (290)
334 2o6q_A Variable lymphocyte rec 99.9 2.9E-22 1E-26 222.0 20.9 204 301-534 16-219 (270)
335 3goz_A Leucine-rich repeat-con 99.9 1.7E-24 6E-29 250.8 0.2 177 379-557 3-209 (362)
336 2ca6_A RAN GTPase-activating p 99.9 8.8E-25 3E-29 255.9 -4.9 248 415-725 23-320 (386)
337 4glp_A Monocyte differentiatio 99.9 1.4E-22 4.8E-27 229.5 12.9 227 326-558 65-308 (310)
338 2xwt_C Thyrotropin receptor; s 99.9 3.3E-22 1.1E-26 217.3 14.6 131 425-557 32-169 (239)
339 2xwt_C Thyrotropin receptor; s 99.9 4.6E-22 1.6E-26 216.1 14.0 205 436-718 23-236 (239)
340 3m19_A Variable lymphocyte rec 99.9 2.6E-21 8.9E-26 211.8 19.9 182 375-561 15-196 (251)
341 2ast_B S-phase kinase-associat 99.9 4.6E-23 1.6E-27 236.5 4.3 230 424-727 70-312 (336)
342 2ca6_A RAN GTPase-activating p 99.9 4.7E-24 1.6E-28 249.7 -4.2 241 299-561 30-320 (386)
343 3m19_A Variable lymphocyte rec 99.9 4.9E-21 1.7E-25 209.6 18.9 89 637-725 108-196 (251)
344 3cvr_A Invasion plasmid antige 99.9 1.1E-21 3.7E-26 237.5 13.4 189 425-709 60-255 (571)
345 1h6u_A Internalin H; cell adhe 99.9 2.5E-21 8.6E-26 218.6 14.8 193 142-387 38-230 (308)
346 4ay9_X Follicle-stimulating ho 99.8 3.3E-21 1.1E-25 222.0 15.1 223 425-721 31-259 (350)
347 2o6s_A Variable lymphocyte rec 99.8 5.4E-21 1.8E-25 202.9 15.4 135 424-558 28-162 (208)
348 2ast_B S-phase kinase-associat 99.8 3.2E-22 1.1E-26 229.5 5.0 253 243-541 49-314 (336)
349 1h6u_A Internalin H; cell adhe 99.8 7.7E-21 2.6E-25 214.6 15.9 210 304-558 22-231 (308)
350 4ay9_X Follicle-stimulating ho 99.8 7.1E-21 2.4E-25 219.3 15.7 244 268-556 12-258 (350)
351 1zar_A RIO2 kinase; serine kin 99.8 3.5E-21 1.2E-25 213.8 10.9 153 852-1038 82-252 (282)
352 3cvr_A Invasion plasmid antige 99.8 4.6E-20 1.6E-24 223.3 16.9 186 351-566 60-252 (571)
353 2o6s_A Variable lymphocyte rec 99.8 5.7E-20 1.9E-24 195.0 15.6 128 427-557 10-137 (208)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 6.7E-19 2.3E-23 188.2 15.2 160 404-566 15-175 (220)
355 2v9t_B SLIT homolog 2 protein 99.8 1.2E-18 4E-23 186.3 15.3 160 403-565 14-173 (220)
356 3e6j_A Variable lymphocyte rec 99.8 4.8E-18 1.7E-22 182.8 19.0 156 402-561 21-176 (229)
357 1dce_A Protein (RAB geranylger 99.8 4.7E-21 1.6E-25 233.4 -5.8 85 638-725 465-550 (567)
358 1m9s_A Internalin B; cell inva 99.8 6.7E-19 2.3E-23 215.6 12.0 200 424-707 21-220 (605)
359 4b8c_D Glucose-repressible alc 99.8 2.3E-19 7.9E-24 225.6 8.1 131 430-565 207-337 (727)
360 2xot_A Amphoterin-induced prot 99.8 6.5E-19 2.2E-23 203.7 10.6 180 377-561 21-206 (361)
361 1m9s_A Internalin B; cell inva 99.8 2.9E-18 9.7E-23 210.1 15.9 187 200-438 25-211 (605)
362 2v70_A SLIT-2, SLIT homolog 2 99.8 3.2E-18 1.1E-22 182.8 13.9 154 377-535 14-168 (220)
363 4b8c_D Glucose-repressible alc 99.8 3.4E-19 1.2E-23 224.0 6.4 225 401-724 174-407 (727)
364 1dce_A Protein (RAB geranylger 99.8 2.1E-20 7.1E-25 227.8 -4.6 214 400-715 349-567 (567)
365 2v9t_B SLIT homolog 2 protein 99.7 6.7E-18 2.3E-22 180.4 14.9 153 377-534 14-166 (220)
366 1h6t_A Internalin B; cell adhe 99.7 7.3E-18 2.5E-22 188.4 14.9 172 142-364 43-214 (291)
367 1h6t_A Internalin B; cell adhe 99.7 4.1E-18 1.4E-22 190.5 12.7 62 214-278 42-103 (291)
368 1xeu_A Internalin C; cellular 99.7 4.2E-18 1.4E-22 187.3 10.7 173 470-725 17-189 (263)
369 2xot_A Amphoterin-induced prot 99.7 9.4E-18 3.2E-22 193.9 13.1 176 328-533 21-202 (361)
370 3e6j_A Variable lymphocyte rec 99.7 3.1E-17 1E-21 176.5 16.2 154 376-535 21-174 (229)
371 1zth_A RIO1 serine protein kin 99.7 2.6E-17 8.9E-22 180.4 11.5 139 859-1013 46-219 (258)
372 1xeu_A Internalin C; cellular 99.7 1.2E-17 4.1E-22 183.6 7.7 168 302-487 20-187 (263)
373 4ezg_A Putative uncharacterize 99.7 6.8E-17 2.3E-21 169.5 13.0 86 469-558 41-126 (197)
374 4ezg_A Putative uncharacterize 99.7 7.1E-17 2.4E-21 169.4 13.0 150 401-558 45-195 (197)
375 1w8a_A SLIT protein; signaling 99.7 2.7E-17 9.2E-22 171.7 9.6 89 637-725 55-143 (192)
376 1w8a_A SLIT protein; signaling 99.7 1.3E-16 4.4E-21 166.5 12.6 137 427-566 11-148 (192)
377 3sb4_A Hypothetical leucine ri 99.7 2E-17 6.7E-22 188.8 3.8 103 447-551 225-328 (329)
378 3sb4_A Hypothetical leucine ri 99.7 9.6E-17 3.3E-21 183.0 9.4 260 118-407 48-328 (329)
379 2wfh_A SLIT homolog 2 protein 99.6 1.4E-15 4.7E-20 158.7 12.7 137 427-567 13-149 (193)
380 2ell_A Acidic leucine-rich nuc 99.6 1.3E-15 4.4E-20 155.3 10.6 131 401-533 25-160 (168)
381 2ell_A Acidic leucine-rich nuc 99.6 1.3E-15 4.3E-20 155.4 9.4 137 423-562 23-164 (168)
382 2o6r_A Variable lymphocyte rec 99.6 5E-15 1.7E-19 152.3 12.9 133 426-561 9-141 (177)
383 4fdw_A Leucine rich hypothetic 99.6 5.2E-14 1.8E-18 163.8 21.3 265 142-460 110-382 (401)
384 4fdw_A Leucine rich hypothetic 99.6 3.4E-14 1.2E-18 165.4 19.3 269 241-556 113-382 (401)
385 2je0_A Acidic leucine-rich nuc 99.6 1.7E-15 5.8E-20 151.0 7.0 127 424-552 17-148 (149)
386 4fs7_A Uncharacterized protein 99.6 7.8E-14 2.7E-18 163.1 21.4 326 140-524 66-392 (394)
387 2wfh_A SLIT homolog 2 protein 99.6 1.2E-14 4.1E-19 151.5 12.8 108 425-533 32-139 (193)
388 2je0_A Acidic leucine-rich nuc 99.6 3.2E-15 1.1E-19 149.0 7.5 128 400-529 17-149 (149)
389 2o6r_A Variable lymphocyte rec 99.5 2E-14 7E-19 147.7 12.6 131 403-536 10-140 (177)
390 4gyi_A RIO2 kinase; protein ki 99.5 4.2E-15 1.4E-19 168.4 6.6 143 855-1012 90-264 (397)
391 4fs7_A Uncharacterized protein 99.5 1.7E-13 5.9E-18 160.2 19.9 334 156-549 58-393 (394)
392 1ds9_A Outer arm dynein; leuci 99.5 3.4E-16 1.2E-20 164.3 -4.2 155 492-722 14-186 (198)
393 1ds9_A Outer arm dynein; leuci 99.5 5E-16 1.7E-20 163.0 -5.5 135 416-557 40-185 (198)
394 1a9n_A U2A', U2A'; complex (nu 99.5 2.8E-14 9.6E-19 146.5 7.4 133 420-557 15-153 (176)
395 1a9n_A U2A', U2A'; complex (nu 99.5 1.2E-13 4.2E-18 141.6 9.7 59 219-278 43-101 (176)
396 3g39_A Variable lymphocyte rec 99.4 4E-13 1.4E-17 136.8 11.7 108 451-561 12-119 (170)
397 2r9u_A Variable lymphocyte rec 99.4 1.2E-12 4E-17 133.8 13.0 108 451-561 15-122 (174)
398 3g39_A Variable lymphocyte rec 99.4 1.2E-12 4.1E-17 133.3 10.6 106 426-534 11-116 (170)
399 2r9u_A Variable lymphocyte rec 99.3 2.5E-12 8.6E-17 131.3 10.8 104 427-533 15-118 (174)
400 4gt6_A Cell surface protein; l 99.3 4.6E-11 1.6E-15 139.5 22.0 330 141-556 59-390 (394)
401 4gt6_A Cell surface protein; l 99.3 5.9E-11 2E-15 138.6 21.7 284 237-556 83-369 (394)
402 2ifg_A High affinity nerve gro 99.2 3E-11 1E-15 138.6 10.7 113 452-567 12-126 (347)
403 3un9_A NLR family member X1; l 99.2 6.8E-13 2.3E-17 152.9 -3.2 86 301-387 126-224 (372)
404 3un9_A NLR family member X1; l 99.2 2.2E-13 7.4E-18 157.0 -8.1 63 301-363 72-139 (372)
405 4h09_A Hypothetical leucine ri 99.1 1.7E-09 5.9E-14 125.5 21.7 126 141-276 42-169 (379)
406 3tm0_A Aminoglycoside 3'-phosp 99.1 1.3E-10 4.3E-15 127.6 11.1 146 856-1011 10-212 (263)
407 2ifg_A High affinity nerve gro 99.1 9.6E-11 3.3E-15 134.3 9.4 102 405-509 13-116 (347)
408 1nd4_A Aminoglycoside 3'-phosp 98.9 7.2E-10 2.5E-14 121.3 6.4 136 861-1011 21-213 (264)
409 4h09_A Hypothetical leucine ri 98.9 7.5E-08 2.6E-12 111.6 22.1 290 140-471 64-355 (379)
410 3sg8_A APH(2'')-ID; antibiotic 98.8 4.8E-09 1.6E-13 117.6 6.1 187 865-1065 25-287 (304)
411 3dxp_A Putative acyl-COA dehyd 98.7 1E-08 3.5E-13 118.0 7.7 143 864-1013 42-249 (359)
412 2ra8_A Uncharacterized protein 98.7 9E-09 3.1E-13 117.3 5.7 62 636-697 252-320 (362)
413 2ra8_A Uncharacterized protein 98.7 5.3E-09 1.8E-13 119.2 3.3 83 447-531 251-341 (362)
414 3rw6_A Nuclear RNA export fact 98.6 3E-09 1E-13 114.9 -1.1 19 55-73 77-97 (267)
415 1io0_A Tropomodulin; LRR prote 98.4 2.2E-08 7.4E-13 103.1 -2.0 99 85-183 28-137 (185)
416 3r70_A Aminoglycoside phosphot 98.4 1.6E-06 5.6E-11 97.6 12.7 138 861-1014 38-239 (320)
417 1io0_A Tropomodulin; LRR prote 98.3 1E-07 3.5E-12 98.0 0.3 118 140-278 31-164 (185)
418 3rw6_A Nuclear RNA export fact 98.3 3.4E-07 1.2E-11 98.8 4.3 66 658-725 168-237 (267)
419 3d1u_A Putative fructosamine-3 98.3 4.3E-06 1.5E-10 92.2 13.1 141 865-1011 20-215 (288)
420 4gkh_A Aminoglycoside 3'-phosp 98.2 9.3E-06 3.2E-10 88.9 12.5 135 867-1012 31-223 (272)
421 3tdw_A Gentamicin resistance p 98.1 1E-05 3.6E-10 90.2 12.7 136 865-1012 24-224 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.0 2.4E-05 8.3E-10 89.3 11.8 146 862-1013 43-244 (362)
423 1pgv_A TMD-1, tropomodulin TMD 97.9 1.4E-06 4.8E-11 88.8 0.1 122 57-179 6-136 (197)
424 3ats_A Putative uncharacterize 97.8 2.4E-05 8.1E-10 89.5 7.7 79 866-944 26-121 (357)
425 2q83_A YTAA protein; 2635576, 97.7 0.00016 5.6E-09 81.9 13.0 141 866-1011 38-251 (346)
426 3e4g_A ATP synthase subunit S, 97.7 1.2E-05 4E-10 80.4 2.4 84 119-207 61-150 (176)
427 1pgv_A TMD-1, tropomodulin TMD 97.7 6E-06 2.1E-10 84.1 -0.1 120 63-182 38-170 (197)
428 2olc_A MTR kinase, methylthior 97.6 0.00024 8.2E-09 82.4 12.1 75 865-941 35-120 (397)
429 3e4g_A ATP synthase subunit S, 97.5 3.6E-05 1.2E-09 76.8 3.0 85 241-336 61-150 (176)
430 3f7w_A Putative fructosamine-3 97.5 0.00076 2.6E-08 74.3 13.4 79 861-943 16-97 (288)
431 3jr1_A Putative fructosamine-3 97.4 0.00059 2E-08 75.7 10.7 139 865-1008 41-232 (312)
432 2pyw_A Uncharacterized protein 97.3 0.00027 9.3E-09 82.6 7.5 78 981-1062 231-313 (420)
433 2ppq_A HSK, HK, homoserine kin 97.0 0.0033 1.1E-07 70.3 11.8 159 850-1011 7-216 (322)
434 1zyl_A Hypothetical protein YI 96.9 0.0066 2.3E-07 68.0 14.1 143 866-1012 32-223 (328)
435 3dxq_A Choline/ethanolamine ki 96.6 0.0062 2.1E-07 67.4 10.7 71 865-943 23-95 (301)
436 3csv_A Aminoglycoside phosphot 96.6 0.013 4.5E-07 65.7 12.9 143 866-1013 24-218 (333)
437 1nw1_A Choline kinase (49.2 KD 96.3 0.0054 1.9E-07 71.4 8.2 72 865-942 78-158 (429)
438 3feg_A Choline/ethanolamine ki 96.2 0.0094 3.2E-07 67.8 9.0 142 866-1012 56-254 (379)
439 3rfe_A Platelet glycoprotein I 96.2 0.0063 2.1E-07 57.8 6.3 66 499-566 11-77 (130)
440 3rfe_A Platelet glycoprotein I 95.9 0.011 3.7E-07 56.1 6.5 56 221-278 11-68 (130)
441 3i1a_A Spectinomycin phosphotr 95.8 0.017 5.9E-07 64.9 8.8 32 982-1013 206-237 (339)
442 2qg7_A Ethanolamine kinase PV0 95.6 0.034 1.2E-06 65.0 10.4 74 865-943 113-188 (458)
443 3c5i_A Choline kinase; choline 95.5 0.012 4.1E-07 67.1 6.2 72 866-942 39-120 (369)
444 2yle_A Protein spire homolog 1 95.5 0.088 3E-06 53.7 11.4 103 941-1064 33-135 (229)
445 3f2s_A CK, chetk-alpha, cholin 94.8 0.046 1.6E-06 62.4 8.0 142 866-1011 58-279 (401)
446 3mes_A Choline kinase; malaria 93.9 0.13 4.6E-06 59.1 9.4 74 865-943 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 87.4 1.3 4.3E-05 50.8 9.0 29 984-1012 246-280 (401)
448 2ks1_B Epidermal growth factor 86.7 0.57 1.9E-05 34.2 3.4 11 774-784 13-23 (44)
449 4ann_A ESSB; membrane protein, 82.7 2.3 8E-05 43.3 7.2 115 914-1066 43-158 (215)
450 2l2t_A Receptor tyrosine-prote 82.6 0.83 2.8E-05 33.3 2.7 10 778-787 12-21 (44)
451 4ano_A ESSB; membrane protein, 78.5 4 0.00014 41.7 7.2 114 914-1065 48-162 (219)
452 2lz0_A Uncharacterized protein 74.1 3.2 0.00011 36.7 4.6 48 155-206 6-53 (100)
453 2l2t_A Receptor tyrosine-prote 70.5 1.9 6.6E-05 31.4 1.8 17 773-789 11-27 (44)
454 2ks1_B Epidermal growth factor 68.1 2.7 9.3E-05 30.7 2.1 24 775-798 10-33 (44)
455 3cxl_A N-chimerin; SH2, RHO-GA 54.1 1.7 5.8E-05 50.6 -1.7 60 864-926 146-214 (463)
456 2klu_A T-cell surface glycopro 51.4 6.5 0.00022 30.9 1.7 18 778-795 12-29 (70)
457 2jwa_A Receptor tyrosine-prote 50.3 6.8 0.00023 28.5 1.6 14 777-791 13-26 (44)
458 2lz0_A Uncharacterized protein 41.8 19 0.00065 31.7 3.6 41 139-180 14-54 (100)
459 2x6h_A GH13170P, VPS34, phosph 35.7 3.7E+02 0.013 32.4 14.5 45 960-1011 529-575 (696)
460 3ls8_A Phosphatidylinositol 3- 32.9 5.6E+02 0.019 30.3 15.1 85 919-1011 402-501 (614)
461 2k1k_A Ephrin type-A receptor 32.5 17 0.00058 25.6 1.3 17 777-793 15-31 (38)
462 2k1k_A Ephrin type-A receptor 24.5 63 0.0021 22.7 3.0 24 774-797 8-31 (38)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.9e-95 Score=929.82 Aligned_cols=730 Identities=68% Similarity=1.103 Sum_probs=652.3
Q ss_pred CCChHHHHHHHHHHhcCCCCCCCCCCCCCCCCcccceeEeCCCcEEEEecCCccccccchhhhhhhcCcccccccccCCC
Q 046275 24 SSPNKDLQQLLSFKAALPNPSVLPNWSPNQNPCGFKGVSCKAASVSSIDLSPFTLSVDFHLVASFLLTLDTLETLSLKNS 103 (1176)
Q Consensus 24 ~~~~~~~~~ll~~k~~~~~~~~l~~w~~~~~cC~W~gv~C~~~~v~~l~L~~~~~~~~~~~~~~~l~~~~~L~~L~L~~n 103 (1176)
.+.++|++|||+||++++||..++||+.++|||+|+||+|+.++|++|||++..+.+....++..+.+++.|+.++++.|
T Consensus 8 ~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~ 87 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNS 87 (768)
T ss_dssp CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTS
T ss_pred cCCHHHHHHHHHHHhhCCCcccccCCCCCCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccccCCcCC
Confidence 33578999999999999988889999988999999999999889999999998888765557777888777777766666
Q ss_pred CCCCcccCCCCCccccCccccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccc-cccccccCCCcEEEccCCCCC
Q 046275 104 NISGTISLPAGSRCSSFLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSG-REAGSLKLSLEVLDLSYNKIS 182 (1176)
Q Consensus 104 ~l~g~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~-~~~~~~~~~L~~LdLs~N~i~ 182 (1176)
.+ .++|..+..+++|++|||++|.+++..+....++.+++|++|+|++|.+.... ...+..+++|++|||++|+++
T Consensus 88 ~~---~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 164 (768)
T 3rgz_A 88 HI---NGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSIS 164 (768)
T ss_dssp CE---EECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCE
T ss_pred Cc---CCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccC
Confidence 54 45678889999999999999999987666557899999999999999887543 444477889999999999998
Q ss_pred CCCccccccccCCCCccEEEeCCCcccccccCCCCCccceeeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhh
Q 046275 183 GANVVPWILFNGCDELKQLALKGNKVTGDINVSKCKNLQFLDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAIS 262 (1176)
Q Consensus 183 ~~~~~~~~~f~~~~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~ 262 (1176)
+.....+..+.++++|++|++++|.+++..++..+++|++|++++|++++.++.++++++|++|+|++|++++.+|..+.
T Consensus 165 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~ 244 (768)
T 3rgz_A 165 GANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAIS 244 (768)
T ss_dssp EETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCHHHHTT
T ss_pred CcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCcccHHHh
Confidence 74222222378999999999999999998888999999999999999998777799999999999999999999999999
Q ss_pred ccccCCeEeeccccccCccCCC-----------CccccCcchhhhhhcCCCccEEEccCCcccccCCccccCCCCCcEEE
Q 046275 263 ACEHLSFLNVSSNLFSGPIPVG-----------YNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFD 331 (1176)
Q Consensus 263 ~l~~L~~L~Ls~N~l~~~~p~~-----------~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 331 (1176)
++++|++|+|++|.+++.+|.. .+.+++.+|..++..+++|++|+|++|++++.+|..|+++++|++|+
T Consensus 245 ~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 324 (768)
T 3rgz_A 245 TCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLA 324 (768)
T ss_dssp TCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEE
T ss_pred cCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEE
Confidence 9999999999999999877653 22344567777777779999999999999999999999999999999
Q ss_pred ccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCC-CCCEEEccCCcCCCCCCccccCCCCCCccEEEccCc
Q 046275 332 ISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLT-NLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNN 410 (1176)
Q Consensus 332 Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N 410 (1176)
+++|.++|.+|...|..+++|++|+|++|.+++.+|..+.+++ +|++|+|++|++++.+|..++...+++|++|+|++|
T Consensus 325 L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n 404 (768)
T 3rgz_A 325 LSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 404 (768)
T ss_dssp CCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSS
T ss_pred CCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCC
Confidence 9999999999999889999999999999999999999999987 999999999999999999887666789999999999
Q ss_pred cccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCcccc
Q 046275 411 LLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPA 490 (1176)
Q Consensus 411 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 490 (1176)
.+++.+|..++++++|++|+|++|++++.+|..++.+++|+.|++++|.+.+.+|..++.+++|++|+|++|++++.+|.
T Consensus 405 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 484 (768)
T 3rgz_A 405 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPS 484 (768)
T ss_dssp EEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCG
T ss_pred ccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHhhccc
Q 046275 491 ALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGK 570 (1176)
Q Consensus 491 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~ 570 (1176)
.+.++++|++|+|++|++++.+|.+++.+++|++|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..+|.....
T Consensus 485 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~ 564 (768)
T 3rgz_A 485 GLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 564 (768)
T ss_dssp GGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTC
T ss_pred HHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987666
Q ss_pred chhhhccccceeeeecCCC-CcccCCCCchhhhhhhhhhccccccCCCCccc-cccCCCCCCCcCCCCCccEEEcccCcC
Q 046275 571 IAANFIVGKKYVYIKNDGS-KECHGAGNLLEFAGIRAERLSRISTRSPCNFT-RVYGGHTQPTFNHNGSMMFLDISYNML 648 (1176)
Q Consensus 571 l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~LdLs~N~l 648 (1176)
.......+..+.++.+... ..|...+...++.++....+..+.....+.+. ..+.+...+.+..+.+|++||||+|++
T Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l 644 (768)
T 3rgz_A 565 IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNML 644 (768)
T ss_dssp BCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCC
T ss_pred hhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcc
Confidence 6555556666777665433 34455566666666666666666655555443 446677788899999999999999999
Q ss_pred ccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCccccccccccccccccccCCCCCCC
Q 046275 649 SGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLTGMIPVMG 728 (1176)
Q Consensus 649 ~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~g~~p~~~ 728 (1176)
+|.+|.+|+++++|+.|+|++|+|+|.||+.|++|++|++||||+|+|+|.||..++.+++|++|||++|+|+|.||..+
T Consensus 645 ~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~ 724 (768)
T 3rgz_A 645 SGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMG 724 (768)
T ss_dssp BSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSS
T ss_pred cccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCccccCCCCCCCCCCCCCCCCC
Q 046275 729 QFETFQPAKFLNNSGLCGLPLPPCEKDS 756 (1176)
Q Consensus 729 ~~~~~~~~~~~~n~~l~~~~~~~c~~~~ 756 (1176)
++.+++..+|.||++|||.|+++|....
T Consensus 725 ~~~~~~~~~~~gN~~Lcg~~l~~C~~~~ 752 (768)
T 3rgz_A 725 QFETFPPAKFLNNPGLCGYPLPRCDPSN 752 (768)
T ss_dssp SGGGSCGGGGCSCTEEESTTSCCCCSCC
T ss_pred hhccCCHHHhcCCchhcCCCCcCCCCCc
Confidence 9999999999999999999999997644
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5.3e-66 Score=659.53 Aligned_cols=597 Identities=33% Similarity=0.458 Sum_probs=402.1
Q ss_pred hhcCcccccccccCCCCCCCcccCCCCCccccCccccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCcccccc---
Q 046275 88 FLLTLDTLETLSLKNSNISGTISLPAGSRCSSFLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREA--- 164 (1176)
Q Consensus 88 ~l~~~~~L~~L~L~~n~l~g~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~--- 164 (1176)
.+..+++|++|||++|.++|.++....+..+++|++|||++|.+.+..+. ..+..+++|++|+|++|+++......
T Consensus 95 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 173 (768)
T 3rgz_A 95 GFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKV-SGGLKLNSLEVLDLSANSISGANVVGWVL 173 (768)
T ss_dssp CCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSC-CSCCCCTTCSEEECCSSCCEEETHHHHHH
T ss_pred hhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCH-HHhccCCCCCEEECCCCccCCcCChhhhh
Confidence 35555566666666665554332212445555566666666555543321 12244555555555555554433222
Q ss_pred ccccCCCcEEEccCCCCCCCC--------------------ccccccccCCCCccEEEeCCCcccc--cccCCCCCccce
Q 046275 165 GSLKLSLEVLDLSYNKISGAN--------------------VVPWILFNGCDELKQLALKGNKVTG--DINVSKCKNLQF 222 (1176)
Q Consensus 165 ~~~~~~L~~LdLs~N~i~~~~--------------------~~~~~~f~~~~~L~~L~L~~n~l~~--~~~~~~l~~L~~ 222 (1176)
+..+++|++|++++|++++.. .++. |..+++|++|++++|.+++ ...+..+++|++
T Consensus 174 ~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~ 251 (768)
T 3rgz_A 174 SDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF--LGDCSALQHLDISGNKLSGDFSRAISTCTELKL 251 (768)
T ss_dssp TTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB--CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCE
T ss_pred hccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc--cccCCCCCEEECcCCcCCCcccHHHhcCCCCCE
Confidence 334444444444444444311 1221 4444555555555555443 223444555555
Q ss_pred eeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhcc-ccCCeEeeccccccCccCCCCccccCcchhhhhhcCC
Q 046275 223 LDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISAC-EHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCS 301 (1176)
Q Consensus 223 L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~ 301 (1176)
|++++|++++..+.. .+++|++|+|++|++++.+|..+... ++|++|+|++|.+++.+|.. +..++
T Consensus 252 L~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~------------~~~l~ 318 (768)
T 3rgz_A 252 LNISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF------------FGSCS 318 (768)
T ss_dssp EECCSSCCEESCCCC-CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGG------------GGGCT
T ss_pred EECCCCcccCccCcc-ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchH------------HhcCC
Confidence 555555554433333 44455555555555554444444432 55555555555554443332 33468
Q ss_pred CccEEEccCCcccccCCcc-ccCCCCCcEEEccCCcCcccCCHHHHhcCC-CCCEEEccCcccCCCCcccccC--CCCCC
Q 046275 302 SLVKLDLSSNNLSGKVPSR-FGSCSSLESFDISSNKFSGELPIEIFLSMS-NLKELVLSFNDFTGALPDSLSN--LTNLE 377 (1176)
Q Consensus 302 ~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~--l~~L~ 377 (1176)
+|++|+|++|++++.+|.. +..+++|++|++++|++++.+|..+ ..++ +|++|++++|.+++.+|..+.. +++|+
T Consensus 319 ~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l-~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~ 397 (768)
T 3rgz_A 319 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESL-TNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397 (768)
T ss_dssp TCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTH-HHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCC
T ss_pred CccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHH-HhhhcCCcEEEccCCCcCCCcChhhhhcccCCcc
Confidence 8999999999998888865 8999999999999999988888775 4555 8999999999999888888877 88899
Q ss_pred EEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeeccc
Q 046275 378 TLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWL 457 (1176)
Q Consensus 378 ~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 457 (1176)
+|++++|++++.+|..+. .+++|++|+|++|++++.+|..++++++|+.|++++|++++.+|..+..+++|++|++++
T Consensus 398 ~L~L~~n~l~~~~p~~l~--~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 475 (768)
T 3rgz_A 398 ELYLQNNGFTGKIPPTLS--NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 475 (768)
T ss_dssp EEECCSSEEEEECCGGGG--GCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCS
T ss_pred EEECCCCccccccCHHHh--cCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecC
Confidence 999999999988888874 467899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCC
Q 046275 458 NQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP 537 (1176)
Q Consensus 458 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 537 (1176)
|++++.+|..++++++|++|+|++|++++.+|.+|+++++|++|+|++|+++|.+|..++.+++|++|+|++|+++|.+|
T Consensus 476 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip 555 (768)
T 3rgz_A 476 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555 (768)
T ss_dssp SCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCC
T ss_pred CcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CCCCCCCCCCEEEccCC----------------------CCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCC
Q 046275 538 PELGDCRSLIWLDLNTN----------------------LFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGA 595 (1176)
Q Consensus 538 ~~~~~l~~L~~L~L~~N----------------------~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1176)
..+..+..+..+++..+ .+.|.+|..+.... ......+....+...... .
T Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~l~~~~~~g~~~~---~---- 627 (768)
T 3rgz_A 556 AAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLS-TRNPCNITSRVYGGHTSP---T---- 627 (768)
T ss_dssp GGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGG-GTCCSCTTSCEEEEECCC---S----
T ss_pred hHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccc-cccccccccceecccCch---h----
Confidence 87766544443332221 01122221111000 000000000000000000 0
Q ss_pred CCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccceeeeccCcccccc
Q 046275 596 GNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGP 675 (1176)
Q Consensus 596 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~ 675 (1176)
+.....+...++ +.+ .+.+.++..+..+.+|+.||||+|+++|.||..|+++++|+.|||++|+++|.
T Consensus 628 --~~~l~~L~~LdL------s~N----~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ 695 (768)
T 3rgz_A 628 --FDNNGSMMFLDM------SYN----MLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR 695 (768)
T ss_dssp --CSSSBCCCEEEC------CSS----CCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEC
T ss_pred --hhccccccEEEC------cCC----cccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCc
Confidence 000000000000 001 12233444566677899999999999999999999999999999999999999
Q ss_pred CCccccCcCcccEEEccCccccccCCCCcccccccccccccccc-ccCCC
Q 046275 676 IPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQ-LTGMI 724 (1176)
Q Consensus 676 iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~-l~g~~ 724 (1176)
||+.+++|++|++||||+|+|+|.||.. +.+..+....+.+|+ |+|.+
T Consensus 696 ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 696 IPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp CCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEESTT
T ss_pred CChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcCCC
Confidence 9999999999999999999999999975 566777778888884 88864
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=7.6e-58 Score=579.02 Aligned_cols=568 Identities=23% Similarity=0.221 Sum_probs=452.8
Q ss_pred ccccccccCCCCCCCcccCCCCCccccCccccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccccccccccCCCc
Q 046275 93 DTLETLSLKNSNISGTISLPAGSRCSSFLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREAGSLKLSLE 172 (1176)
Q Consensus 93 ~~L~~L~L~~n~l~g~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~ 172 (1176)
+++++|+|++|.+++.. +..+..+++|++|||++|.+++..+ ..++.+++|++|+|++|+|+.++...+..+++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~~--~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 100 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLP--AANFTRYSQLTSLDVGFNTISKLEP--ELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLT 100 (680)
T ss_dssp TTCSEEECCSSCCCCCC--GGGGGGGTTCSEEECCSSCCCCCCT--THHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCS
T ss_pred CCCcEEECCCCCCCCcC--HHHHhCCCcCcEEECCCCccCccCH--HHHhcccCcCEEECCCCccCccChhhhccCCCCC
Confidence 58899999999998632 3456788999999999999987655 3578899999999999999999988899999999
Q ss_pred EEEccCCCCCCCCccccccccCCCCccEEEeCCCccccc--ccCCCCCccceeeccCCcccccCCC-c--cCCCCCcEEE
Q 046275 173 VLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGD--INVSKCKNLQFLDVSSNNFSMAVPS-F--GDCLALEYLD 247 (1176)
Q Consensus 173 ~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~-l--~~l~~L~~L~ 247 (1176)
+|+|++|++++ ++...|.++++|++|+|++|.+++. ..+..+++|++|++++|++++.++. + ..+++|++|+
T Consensus 101 ~L~L~~n~l~~---~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 177 (680)
T 1ziw_A 101 ELHLMSNSIQK---IKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLE 177 (680)
T ss_dssp EEECCSSCCCC---CCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEE
T ss_pred EEECCCCccCc---cChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEE
Confidence 99999999986 6666789999999999999999863 4577899999999999999887653 3 3568999999
Q ss_pred cCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccccCCCC-
Q 046275 248 ISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGSCSS- 326 (1176)
Q Consensus 248 Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~- 326 (1176)
+++|++++..+..+..+.+|+.|++++|.+.+.... .++..+ ..++|+.|++++|.+++..|..|..++.
T Consensus 178 L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~-------~~~~~l--~~~~L~~L~L~~n~l~~~~~~~~~~l~~~ 248 (680)
T 1ziw_A 178 LSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTE-------KLCLEL--ANTSIRNLSLSNSQLSTTSNTTFLGLKWT 248 (680)
T ss_dssp CTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHH-------HHHHHH--TTSCCCEEECTTSCCCEECTTTTGGGGGS
T ss_pred CCCCcccccChhhhhhhhhhhhhhccccccChhhHH-------HHHHHh--hhccccEEEccCCcccccChhHhhccCcC
Confidence 999999999999999999999999999887521110 111111 2378999999999999888888988865
Q ss_pred -CcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCC-----CCc--cccCCC
Q 046275 327 -LESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGA-----IPH--NLCQGP 398 (1176)
Q Consensus 327 -L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-----~p~--~~~~~~ 398 (1176)
|++|++++|+++ .++...|..+++|++|++++|.+++..|..+.++++|++|++++|...+. +|. ......
T Consensus 249 ~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~ 327 (680)
T 1ziw_A 249 NLTMLDLSYNNLN-VVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQW 327 (680)
T ss_dssp CCCEEECTTSCCC-EECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTT
T ss_pred CCCEEECCCCCcC-ccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhccc
Confidence 999999999998 45555678999999999999999988899999999999999998866542 232 111245
Q ss_pred CCCccEEEccCccccCCCCccccccccCcEEEcCCccccCC--CCccccC--CCccCeeecccccccCCCCCCCCCcccc
Q 046275 399 RNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGT--IPSSLGS--LSKLQDLKLWLNQLHGEIPPELGNIQTL 474 (1176)
Q Consensus 399 ~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~p~~~~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L 474 (1176)
+++|++|++++|.+++..+..|.++++|++|++++|.++.. .+..|.. .++|+.|++++|++++..|..|..+++|
T Consensus 328 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L 407 (680)
T 1ziw_A 328 LKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHL 407 (680)
T ss_dssp CTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred CCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCC
Confidence 68899999999999998888999999999999999986532 2223333 3589999999999998889999999999
Q ss_pred ceeecccccccCccc-cccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCccc--ccCCCCCCCCCCCCEEEc
Q 046275 475 ETLFLDFNELTGTLP-AALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFY--GRIPPELGDCRSLIWLDL 551 (1176)
Q Consensus 475 ~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L 551 (1176)
++|+|++|++++.+| ..|.++++|++|++++|++++..+..|..+++|+.|++++|.+. +.+|..+..+++|+.|+|
T Consensus 408 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~L 487 (680)
T 1ziw_A 408 EVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDL 487 (680)
T ss_dssp CEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEEC
T ss_pred CEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEEC
Confidence 999999999987665 68999999999999999999888899999999999999999987 578999999999999999
Q ss_pred cCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCC
Q 046275 552 NTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPT 631 (1176)
Q Consensus 552 ~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 631 (1176)
++|++++ +|+..|
T Consensus 488 s~N~l~~-i~~~~~------------------------------------------------------------------ 500 (680)
T 1ziw_A 488 SNNNIAN-INDDML------------------------------------------------------------------ 500 (680)
T ss_dssp CSSCCCC-CCTTTT------------------------------------------------------------------
T ss_pred CCCCCCc-CChhhh------------------------------------------------------------------
Confidence 9999984 443322
Q ss_pred cCCCCCccEEEcccCcCccC--------CCccccccccceeeeccCccccccCCc-cccCcCcccEEEccCccccccCCC
Q 046275 632 FNHNGSMMFLDISYNMLSGS--------IPKEIGSMSYLFILNLGHNNLSGPIPT-EVGDLRGLNILDLSSNRLEGTIPS 702 (1176)
Q Consensus 632 ~~~~~~l~~LdLs~N~l~g~--------iP~~~~~l~~L~~L~L~~N~l~g~iP~-~~~~L~~L~~L~Ls~N~l~g~iP~ 702 (1176)
..+.+|++|||++|++++. .+..|+++++|+.|+|++|+++ .+|. .|+++++|+.|||++|+|++..|.
T Consensus 501 -~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 578 (680)
T 1ziw_A 501 -EGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKIIDLGLNNLNTLPAS 578 (680)
T ss_dssp -TTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred -ccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHcccccCcceeECCCCCCCcCCHh
Confidence 2334567777777777653 1223677777777777777777 4443 577777777777777777754444
Q ss_pred CccccccccccccccccccCCCCCCC--CccccCCccccCCCCCCC
Q 046275 703 SMSSLTLLNEIDLCNNQLTGMIPVMG--QFETFQPAKFLNNSGLCG 746 (1176)
Q Consensus 703 ~l~~l~~L~~l~ls~N~l~g~~p~~~--~~~~~~~~~~~~n~~l~~ 746 (1176)
.+..+++|+.|+|++|+|++.+|..- .+..+....+.+|+..|.
T Consensus 579 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 579 VFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp TTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred HhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 56677777777777777777766421 344555566667776664
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.5e-56 Score=565.13 Aligned_cols=588 Identities=22% Similarity=0.219 Sum_probs=491.2
Q ss_pred cccceeEeCC-----------CcEEEEecCCccccccchhhhhhhcCcccccccccCCCCCCCcccCCCCCccccCcccc
Q 046275 56 CGFKGVSCKA-----------ASVSSIDLSPFTLSVDFHLVASFLLTLDTLETLSLKNSNISGTISLPAGSRCSSFLSSL 124 (1176)
Q Consensus 56 C~W~gv~C~~-----------~~v~~l~L~~~~~~~~~~~~~~~l~~~~~L~~L~L~~n~l~g~~~~~~~~~~~~~L~~L 124 (1176)
|.++.|.|.+ .+++.|+|+++.+.. ..+..+..+++|++|+|++|.+++.. |..+..+++|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~---~~~~~~~~l~~L~~L~Ls~n~l~~~~--~~~~~~l~~L~~L 78 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRR---LPAANFTRYSQLTSLDVGFNTISKLE--PELCQKLPMLKVL 78 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCC---CCGGGGGGGTTCSEEECCSSCCCCCC--TTHHHHCTTCCEE
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCC---cCHHHHhCCCcCcEEECCCCccCccC--HHHHhcccCcCEE
Confidence 6666677764 258899999877653 34456889999999999999998643 5667788999999
Q ss_pred ccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeC
Q 046275 125 DLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALK 204 (1176)
Q Consensus 125 dLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~ 204 (1176)
||++|.+++.++. .++.+++|++|+|++|+++.++...+..+++|++|+|++|.+++ ++...|..+++|++|+++
T Consensus 79 ~L~~n~l~~l~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~---~~~~~~~~l~~L~~L~L~ 153 (680)
T 1ziw_A 79 NLQHNELSQLSDK--TFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS---TKLGTQVQLENLQELLLS 153 (680)
T ss_dssp ECCSSCCCCCCTT--TTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSC---CCCCSSSCCTTCCEEECC
T ss_pred ECCCCccCccChh--hhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccc---cCchhhcccccCCEEEcc
Confidence 9999999876542 47899999999999999999998889999999999999999987 455667899999999999
Q ss_pred CCccccccc----CCCCCccceeeccCCcccccCC-CccCCCCCcEEEcCCCcCCCCcChhhh---ccccCCeEeecccc
Q 046275 205 GNKVTGDIN----VSKCKNLQFLDVSSNNFSMAVP-SFGDCLALEYLDISANKFTGDVGHAIS---ACEHLSFLNVSSNL 276 (1176)
Q Consensus 205 ~n~l~~~~~----~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~l~---~l~~L~~L~Ls~N~ 276 (1176)
+|.+++... ...+++|++|++++|++++.++ .+..+.+|+.|++++|.+.......+. ..++|++|++++|.
T Consensus 154 ~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~ 233 (680)
T 1ziw_A 154 NNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQ 233 (680)
T ss_dssp SSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSC
T ss_pred CCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCc
Confidence 999986432 3456899999999999998776 488999999999999988643322221 34789999999999
Q ss_pred ccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEE
Q 046275 277 FSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELV 356 (1176)
Q Consensus 277 l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~ 356 (1176)
+++..|..+..+. .++|++|+|++|++++..|..|+.+++|++|++++|++++ ++...|..+++|++|+
T Consensus 234 l~~~~~~~~~~l~----------~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~ 302 (680)
T 1ziw_A 234 LSTTSNTTFLGLK----------WTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQH-LFSHSLHGLFNVRYLN 302 (680)
T ss_dssp CCEECTTTTGGGG----------GSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSE-ECTTTTTTCTTCCEEE
T ss_pred ccccChhHhhccC----------cCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCc-cChhhhcCCCCccEEe
Confidence 9987776654331 1469999999999998888999999999999999999985 4445678999999999
Q ss_pred ccCcccCC-----CCcc----cccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCC--CCcccccc--
Q 046275 357 LSFNDFTG-----ALPD----SLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGS--IPSTLSNC-- 423 (1176)
Q Consensus 357 Ls~N~l~~-----~~p~----~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~--~p~~l~~l-- 423 (1176)
+++|...+ .+|. .+..+++|++|++++|.+++..+..+ ..+++|++|++++|.+... .+..+..+
T Consensus 303 L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~ 380 (680)
T 1ziw_A 303 LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMF--TGLINLKYLSLSNSFTSLRTLTNETFVSLAH 380 (680)
T ss_dssp CTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTT--TTCTTCCEEECTTCBSCCCEECTTTTGGGTT
T ss_pred ccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHh--ccccCCcEEECCCCchhhhhcchhhhccccc
Confidence 99886554 2333 78899999999999999998766656 4578999999999986542 22334433
Q ss_pred ccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCC-CCCCCccccceeecccccccCccccccccCCCCCeee
Q 046275 424 SQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIP-PELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWIS 502 (1176)
Q Consensus 424 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 502 (1176)
++|+.|++++|++++..|..|..+++|+.|++++|.+.+.+| ..+.++++|++|+|++|++++..+..|..+++|+.|+
T Consensus 381 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ 460 (680)
T 1ziw_A 381 SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLM 460 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEE
T ss_pred CcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccch
Confidence 589999999999999999999999999999999999998776 6899999999999999999999999999999999999
Q ss_pred ccccccC--CCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccc
Q 046275 503 LSNNHLG--GEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKK 580 (1176)
Q Consensus 503 Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~ 580 (1176)
+++|.++ +.+|..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++. +...+.
T Consensus 461 l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~-------------- 525 (680)
T 1ziw_A 461 LRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARL-WKHANP-------------- 525 (680)
T ss_dssp CTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGG-GSTTST--------------
T ss_pred hccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCcccc-chhhcc--------------
Confidence 9999987 57899999999999999999999987788899999999999999999742 111000
Q ss_pred eeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccc
Q 046275 581 YVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMS 660 (1176)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~ 660 (1176)
+.....|..+.+|++|||++|+++...+..|++++
T Consensus 526 ---------------------------------------------~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 560 (680)
T 1ziw_A 526 ---------------------------------------------GGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLF 560 (680)
T ss_dssp ---------------------------------------------TSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred ---------------------------------------------CCcchhhcCCCCCCEEECCCCCCCCCCHHHccccc
Confidence 00112355678899999999999954445799999
Q ss_pred cceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCcc-ccccccccccccccccCCCCC
Q 046275 661 YLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMS-SLTLLNEIDLCNNQLTGMIPV 726 (1176)
Q Consensus 661 ~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~-~l~~L~~l~ls~N~l~g~~p~ 726 (1176)
+|+.|+|++|++++..|..|+.+++|+.|+|++|+|++..|..+. .+++|+.|+|++|++...-+.
T Consensus 561 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 561 ELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 999999999999966666789999999999999999987777777 799999999999999887654
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.5e-55 Score=545.30 Aligned_cols=516 Identities=21% Similarity=0.255 Sum_probs=431.2
Q ss_pred CccccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCcc
Q 046275 120 FLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELK 199 (1176)
Q Consensus 120 ~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~ 199 (1176)
++++|||++|.+++..+ ..++.+++|++|+|++|+|+.+....+..+++|++|+|++|++++ ++...|.++++|+
T Consensus 34 ~l~~L~Ls~n~i~~~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~---~~~~~~~~l~~L~ 108 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQN--TTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIF---MAETALSGPKALK 108 (606)
T ss_dssp TCCEEECTTCCCSEECT--TTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSE---ECTTTTSSCTTCC
T ss_pred cCcEEEccCCccCcCCh--hHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccc---cChhhhccccccc
Confidence 46667777776665433 246777788888888887777777777777788888888888775 4445677788888
Q ss_pred EEEeCCCcccc--cccCCCCCccceeeccCCcccccC-CCccCCCCCcEEEcCCCcCCCCcChhhhccccCC--eEeecc
Q 046275 200 QLALKGNKVTG--DINVSKCKNLQFLDVSSNNFSMAV-PSFGDCLALEYLDISANKFTGDVGHAISACEHLS--FLNVSS 274 (1176)
Q Consensus 200 ~L~L~~n~l~~--~~~~~~l~~L~~L~Ls~N~l~~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~--~L~Ls~ 274 (1176)
+|++++|.++. ...+..+++|++|++++|+++++. +.+..+++|++|++++|++++..+..++.+++|+ .|++++
T Consensus 109 ~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~ 188 (606)
T 3t6q_A 109 HLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNG 188 (606)
T ss_dssp EEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTT
T ss_pred EeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCC
Confidence 88888888876 356788899999999999998753 5566699999999999999988888899999999 899999
Q ss_pred ccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCc----ccCCHHHHhcCC
Q 046275 275 NLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFS----GELPIEIFLSMS 350 (1176)
Q Consensus 275 N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~----~~i~~~~~~~l~ 350 (1176)
|.+++..|..+. ..+|+.|++++|.. ++..+..+.++....+..+.+. ..++...|..+.
T Consensus 189 n~l~~~~~~~~~-------------~~~L~~L~l~~~~~---~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~ 252 (606)
T 3t6q_A 189 NDIAGIEPGAFD-------------SAVFQSLNFGGTQN---LLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLC 252 (606)
T ss_dssp CCCCEECTTTTT-------------TCEEEEEECTTCSC---HHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGG
T ss_pred CccCccChhHhh-------------hccccccccCCchh---HHHHhhhccccchhheechhhccccccccChhHhchhh
Confidence 999876665432 24789999998872 3445555555555544433332 245555666654
Q ss_pred --CCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcE
Q 046275 351 --NLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVS 428 (1176)
Q Consensus 351 --~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 428 (1176)
+|++|++++|.+++..+..|.++++|++|++++|+++ .+|..+ ..+++|++|++++|.+++..|..+.++++|++
T Consensus 253 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l--~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 329 (606)
T 3t6q_A 253 EMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGL--VGLSTLKKLVLSANKFENLCQISASNFPSLTH 329 (606)
T ss_dssp GSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSC--CSCTTCCEEECTTCCCSBGGGGCGGGCTTCSE
T ss_pred cCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhh--cccccCCEEECccCCcCcCchhhhhccCcCCE
Confidence 7999999999999888888999999999999999998 788876 45789999999999999888899999999999
Q ss_pred EEcCCccccCCCCc-cccCCCccCeeecccccccCCC--CCCCCCccccceeecccccccCccccccccCCCCCeeeccc
Q 046275 429 LHLSFNYLTGTIPS-SLGSLSKLQDLKLWLNQLHGEI--PPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSN 505 (1176)
Q Consensus 429 L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 505 (1176)
|++++|.+.+.+|. .+..+++|++|++++|.+.+.. |..++.+++|++|++++|++++..|..|.++++|++|++++
T Consensus 330 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 409 (606)
T 3t6q_A 330 LSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAF 409 (606)
T ss_dssp EECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTT
T ss_pred EECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCC
Confidence 99999999877765 5899999999999999999776 88899999999999999999989999999999999999999
Q ss_pred cccCCCCCc-cccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCccc-CChhHHhhcccchhhhccccceee
Q 046275 506 NHLGGEIPT-WIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGS-IPPALFKQSGKIAANFIVGKKYVY 583 (1176)
Q Consensus 506 N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~-ip~~~~~~~~~l~~~~~~~~~~~~ 583 (1176)
|++++..|. .+..+++|++|++++|.+.+..|..+..+++|+.|+|++|++++. +|..
T Consensus 410 n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-------------------- 469 (606)
T 3t6q_A 410 TRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKT-------------------- 469 (606)
T ss_dssp CCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSS--------------------
T ss_pred CcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccc--------------------
Confidence 999987665 489999999999999999999999999999999999999999752 1110
Q ss_pred eecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccce
Q 046275 584 IKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLF 663 (1176)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~ 663 (1176)
..+..+.+|++|||++|++++.+|..|+++++|+
T Consensus 470 ----------------------------------------------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 503 (606)
T 3t6q_A 470 ----------------------------------------------NSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMN 503 (606)
T ss_dssp ----------------------------------------------CGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ----------------------------------------------hhhccCCCccEEECCCCccCccChhhhccccCCC
Confidence 0133456799999999999999999999999999
Q ss_pred eeeccCccccccCCccccCcCcccEEEccCccccccCCCCccccccccccccccccccCCCCC
Q 046275 664 ILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLTGMIPV 726 (1176)
Q Consensus 664 ~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~g~~p~ 726 (1176)
.|+|++|++++.+|..+++++.| +|+|++|++++.+|..+..+++|+.|++++|++++..+.
T Consensus 504 ~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 504 HVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp EEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred EEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 99999999999999999999999 999999999998888899999999999999999987663
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-52 Score=541.98 Aligned_cols=557 Identities=24% Similarity=0.228 Sum_probs=437.1
Q ss_pred cccCCCCCCCcccCCCCCccccCccccccCCcccCCCCCcccccCCCCCCcEEecCCC-CCCccccccccccCCCcEEEc
Q 046275 98 LSLKNSNISGTISLPAGSRCSSFLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSN-LLDFSGREAGSLKLSLEVLDL 176 (1176)
Q Consensus 98 L~L~~n~l~g~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n-~i~~~~~~~~~~~~~L~~LdL 176 (1176)
.|.++++++ .+|. ..++|++||||+|.+++..+ ..++.+++|++|+|++| .+..++...+..+++|++|+|
T Consensus 9 ~dcs~~~L~---~vP~---lp~~l~~LdLs~N~i~~i~~--~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~L 80 (844)
T 3j0a_A 9 AFYRFCNLT---QVPQ---VLNTTERLLLSFNYIRTVTA--SSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDL 80 (844)
T ss_dssp EEESCCCSS---CCCS---SCTTCCEEEEESCCCCEECS--SSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEEC
T ss_pred EEccCCCCC---CCCC---CCCCcCEEECCCCcCCccCh--hHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEEC
Confidence 455566665 3444 34678888888888876543 34788888888888888 556676777888888888999
Q ss_pred cCCCCCCCCccccccccCCCCccEEEeCCCcccc--cc--cCCCCCccceeeccCCcccccCC--CccCCCCCcEEEcCC
Q 046275 177 SYNKISGANVVPWILFNGCDELKQLALKGNKVTG--DI--NVSKCKNLQFLDVSSNNFSMAVP--SFGDCLALEYLDISA 250 (1176)
Q Consensus 177 s~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~--~~--~~~~l~~L~~L~Ls~N~l~~~~~--~l~~l~~L~~L~Ls~ 250 (1176)
++|+|++ +....|.++++|++|+|++|.+++ .. .+..+++|++|+|++|.+++..+ .|+++++|++|+|++
T Consensus 81 s~N~l~~---~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~ 157 (844)
T 3j0a_A 81 GSSKIYF---LHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSS 157 (844)
T ss_dssp TTCCCCE---ECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEES
T ss_pred CCCcCcc---cCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCC
Confidence 8888876 555668888889999999988876 22 27889999999999999987643 589999999999999
Q ss_pred CcCCCCcChhhhcc--ccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccccCC---C
Q 046275 251 NKFTGDVGHAISAC--EHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGSC---S 325 (1176)
Q Consensus 251 N~l~~~~~~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l---~ 325 (1176)
|.+++..+..+..+ ++|+.|+++.|.+.+..|..+..... .+.. ..|+.|++++|.+++..+..+... +
T Consensus 158 N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~-----~~~~-~~L~~L~Ls~n~l~~~~~~~~~~~l~~~ 231 (844)
T 3j0a_A 158 NQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMN-----PFRN-MVLEILDVSGNGWTVDITGNFSNAISKS 231 (844)
T ss_dssp SCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSC-----TTTT-CCBSEEBCSSCCSSTTTTSGGGGTSCSC
T ss_pred CcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCC-----cccc-CceeEEecCCCcCchhHHHHHHhhcCcc
Confidence 99999999999888 89999999999999877766544321 1111 359999999999988877776544 6
Q ss_pred CCcEEEccCCcCcc--------cCCHHHHhcC--CCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCcccc
Q 046275 326 SLESFDISSNKFSG--------ELPIEIFLSM--SNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLC 395 (1176)
Q Consensus 326 ~L~~L~Ls~N~l~~--------~i~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 395 (1176)
+++.|.++.+.+.. .+....|.++ ++|++|+|++|.+++..|..+..+++|+.|+|++|++++..|..+
T Consensus 232 ~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~- 310 (844)
T 3j0a_A 232 QAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAF- 310 (844)
T ss_dssp CBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTT-
T ss_pred cccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHh-
Confidence 78888887433321 2233344444 789999999999998888999999999999999999997777666
Q ss_pred CCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccc
Q 046275 396 QGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLE 475 (1176)
Q Consensus 396 ~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 475 (1176)
..+++|++|+|++|.+++..|..|..+++|+.|++++|++++..+..|..+++|+.|+|++|.+++ + ..+++|+
T Consensus 311 -~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i----~~~~~L~ 384 (844)
T 3j0a_A 311 -YGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-I----HFIPSIP 384 (844)
T ss_dssp -TTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-C----SSCCSCS
T ss_pred -cCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-c----cCCCCcc
Confidence 456889999999999998889999999999999999999998888889999999999999999983 3 3378899
Q ss_pred eeecccccccCccccccccCCCCCeeeccccccCCCC-CccccCCCCCCeEEccCCcccccCCC-CCCCCCCCCEEEccC
Q 046275 476 TLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEI-PTWIGQLSNLAILKLSNNSFYGRIPP-ELGDCRSLIWLDLNT 553 (1176)
Q Consensus 476 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~ 553 (1176)
.|++++|+++ .+|.. ..+++.|++++|++++.. +..++.+++|++|+|++|++++..+. .+..+++|+.|+|++
T Consensus 385 ~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~ 460 (844)
T 3j0a_A 385 DIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGE 460 (844)
T ss_dssp EEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEES
T ss_pred hhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCC
Confidence 9999999999 55544 467899999999998632 33466899999999999999865443 466789999999999
Q ss_pred CCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcC
Q 046275 554 NLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFN 633 (1176)
Q Consensus 554 N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 633 (1176)
|.+++..+.. .....|.
T Consensus 461 N~l~~~~~~~---------------------------------------------------------------~~~~~~~ 477 (844)
T 3j0a_A 461 NMLQLAWETE---------------------------------------------------------------LCWDVFE 477 (844)
T ss_dssp CCCSSSCCSC---------------------------------------------------------------CCSSCSS
T ss_pred Cccccccccc---------------------------------------------------------------cchhhhc
Confidence 9987422110 0112355
Q ss_pred CCCCccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCcccccccccc
Q 046275 634 HNGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEI 713 (1176)
Q Consensus 634 ~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l 713 (1176)
.+.+|+.|||++|+|++.+|..|+++++|+.|+|++|+|++..|..+. ++|+.|||++|+|+|.+|..+. +|+.|
T Consensus 478 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l 552 (844)
T 3j0a_A 478 GLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVL 552 (844)
T ss_dssp CBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEE
T ss_pred CcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEE
Confidence 667899999999999999999999999999999999999976666665 8999999999999999998764 68899
Q ss_pred ccccccccCCCCCCCCccccCCccccCCCCCCCCCCC-CCCC
Q 046275 714 DLCNNQLTGMIPVMGQFETFQPAKFLNNSGLCGLPLP-PCEK 754 (1176)
Q Consensus 714 ~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~~~~~~-~c~~ 754 (1176)
++++|++....+.. .|.......|..+||.|.. .|..
T Consensus 553 ~l~~Np~~C~c~~~----~f~~~~~~~~~~~~~~~~~~~C~~ 590 (844)
T 3j0a_A 553 DITHNKFICECELS----TFINWLNHTNVTIAGPPADIYCVY 590 (844)
T ss_dssp EEEEECCCCSSSCC----SHHHHHHHTTTTTCCCGGGCCCSS
T ss_pred EecCCCcccccccH----HHHHHHHhcCcccccccccCccCC
Confidence 99999998766532 2222223445566666543 5643
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.5e-53 Score=528.01 Aligned_cols=528 Identities=21% Similarity=0.179 Sum_probs=444.9
Q ss_pred cccccCCCCCCCcccCCCCCccccCccccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccccccccccCCCcEEE
Q 046275 96 ETLSLKNSNISGTISLPAGSRCSSFLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLD 175 (1176)
Q Consensus 96 ~~L~L~~n~l~g~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~Ld 175 (1176)
+.++.+++.++ .+|..+. ++|++|||++|.+++..+ ..++++++|++|+|++|+|+.++...+..+++|++|+
T Consensus 14 ~~~~c~~~~l~---~ip~~~~--~~l~~L~Ls~n~l~~~~~--~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~ 86 (606)
T 3vq2_A 14 ITYQCMDQKLS---KVPDDIP--SSTKNIDLSFNPLKILKS--YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLI 86 (606)
T ss_dssp TEEECTTSCCS---SCCTTSC--TTCCEEECTTSCCCEECT--TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CceEccCCCcc---cCCCCCC--CCcCEEECCCCCcCEeCh--hhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeE
Confidence 57889999887 4565443 789999999999987654 2578999999999999999999888899999999999
Q ss_pred ccCCCCCCCCccccccccCCCCccEEEeCCCccccc--ccCCCCCccceeeccCCcccc--cCCCccCCCCCcEEEcCCC
Q 046275 176 LSYNKISGANVVPWILFNGCDELKQLALKGNKVTGD--INVSKCKNLQFLDVSSNNFSM--AVPSFGDCLALEYLDISAN 251 (1176)
Q Consensus 176 Ls~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~--~~~~l~~l~~L~~L~Ls~N 251 (1176)
|++|+|++ ++...|.++++|++|+|++|.++.. ..+..+++|++|++++|.+++ ++..++++++|++|++++|
T Consensus 87 Ls~n~l~~---~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 87 LTGNPIQS---FSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp CTTCCCCC---CCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred CCCCcccc---cChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 99999987 5556788999999999999999863 468899999999999999985 4567899999999999999
Q ss_pred cCCCCcChhhhccccCC----eEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCccc-ccCCccccCCCC
Q 046275 252 KFTGDVGHAISACEHLS----FLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLS-GKVPSRFGSCSS 326 (1176)
Q Consensus 252 ~l~~~~~~~l~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~-~~~p~~~~~l~~ 326 (1176)
++++..+..++.+.+|+ +|++++|.+++..+. .+.. .+|+.|++++|.++ +..|..+.++++
T Consensus 164 ~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~------------~~~~-~~L~~L~L~~n~~~~~~~~~~~~~l~~ 230 (606)
T 3vq2_A 164 YIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQ------------AFQG-IKLHELTLRGNFNSSNIMKTCLQNLAG 230 (606)
T ss_dssp CCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTT------------TTTT-CEEEEEEEESCCSCHHHHHHHHHTTTT
T ss_pred cceecChhhhhhhhccccccceeeccCCCcceeCcc------------cccC-ceeeeeeccCCccchhHHHHHhccccc
Confidence 99988888888888776 799999998844333 3333 37999999999987 467788899999
Q ss_pred CcEEEccCCcCcc-----cCCHHHHhcCC--CCCEEEc-cCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCC
Q 046275 327 LESFDISSNKFSG-----ELPIEIFLSMS--NLKELVL-SFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGP 398 (1176)
Q Consensus 327 L~~L~Ls~N~l~~-----~i~~~~~~~l~--~L~~L~L-s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 398 (1176)
|+.+++..+.+.+ .++...+..+. .++.+++ ..|.+++.+|. +..+++|+.|++++|.+. .+| .+ ..
T Consensus 231 L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l--~~ 305 (606)
T 3vq2_A 231 LHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DV--PK 305 (606)
T ss_dssp CEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CC--CT
T ss_pred cccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-hc--cc
Confidence 9998887655532 23333343333 4666777 67888888777 899999999999999997 566 44 45
Q ss_pred CCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCC--CCCCCCCccccce
Q 046275 399 RNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGE--IPPELGNIQTLET 476 (1176)
Q Consensus 399 ~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~ 476 (1176)
+++|++|++++|.+ +.+| .+ .+++|+.|++++|+..+.+ .+..+++|++|++++|.+++. +|..+..+++|++
T Consensus 306 ~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~ 380 (606)
T 3vq2_A 306 HFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRH 380 (606)
T ss_dssp TCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCE
T ss_pred cccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccE
Confidence 67899999999999 5788 45 8999999999999765444 677899999999999999866 4888899999999
Q ss_pred eecccccccCccccccccCCCCCeeeccccccCCCCC-ccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCC
Q 046275 477 LFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIP-TWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNL 555 (1176)
Q Consensus 477 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 555 (1176)
|+|++|.+++ +|..|.++++|+.|++++|++.+..| ..+..+++|++|++++|.+.+.+|..+..+++|+.|++++|+
T Consensus 381 L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 459 (606)
T 3vq2_A 381 LDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNS 459 (606)
T ss_dssp EECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCE
T ss_pred eECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCc
Confidence 9999999984 67889999999999999999998877 689999999999999999999999999999999999999999
Q ss_pred Cccc-CChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCC
Q 046275 556 FNGS-IPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNH 634 (1176)
Q Consensus 556 l~g~-ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (1176)
+++. +|. .|..
T Consensus 460 l~~~~~~~--------------------------------------------------------------------~~~~ 471 (606)
T 3vq2_A 460 FKDNTLSN--------------------------------------------------------------------VFAN 471 (606)
T ss_dssp EGGGEECS--------------------------------------------------------------------CCTT
T ss_pred CCCcchHH--------------------------------------------------------------------hhcc
Confidence 8863 232 1334
Q ss_pred CCCccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCccccc-ccccc
Q 046275 635 NGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLT-LLNEI 713 (1176)
Q Consensus 635 ~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~-~L~~l 713 (1176)
+.+|++|||++|++++.+|..|+++++|+.|+|++|++++.+|..|+.+++|++|||++|+|+ .+|..+..++ +|+.|
T Consensus 472 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l 550 (606)
T 3vq2_A 472 TTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFF 550 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEE
T ss_pred CCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEE
Confidence 567999999999999999999999999999999999999989999999999999999999999 7999899997 59999
Q ss_pred ccccccccCCCCC
Q 046275 714 DLCNNQLTGMIPV 726 (1176)
Q Consensus 714 ~ls~N~l~g~~p~ 726 (1176)
++++|++.+..|.
T Consensus 551 ~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 551 NLTNNSVACICEH 563 (606)
T ss_dssp ECCSCCCCCSSTT
T ss_pred EccCCCcccCCcc
Confidence 9999999987664
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.1e-52 Score=521.94 Aligned_cols=526 Identities=21% Similarity=0.201 Sum_probs=434.9
Q ss_pred ccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEE
Q 046275 123 SLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLA 202 (1176)
Q Consensus 123 ~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~ 202 (1176)
.+|.++..++..+..+ .+.+++|+|++|+|+.++...+..+++|++|+|++|+|++ +....|.++++|++|+
T Consensus 16 ~~~c~~~~l~~iP~~l-----~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~---~~~~~~~~l~~L~~L~ 87 (606)
T 3t6q_A 16 TYNCENLGLNEIPGTL-----PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW---IHEDTFQSQHRLDTLV 87 (606)
T ss_dssp EEECTTSCCSSCCTTS-----CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCE---ECTTTTTTCTTCCEEE
T ss_pred eEECCCCCcccCcCCC-----CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccce---eChhhccCccccCeee
Confidence 4556666665544332 2478999999999999988889999999999999999986 5667789999999999
Q ss_pred eCCCccccc--ccCCCCCccceeeccCCcccccC-CCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccC
Q 046275 203 LKGNKVTGD--INVSKCKNLQFLDVSSNNFSMAV-PSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSG 279 (1176)
Q Consensus 203 L~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 279 (1176)
|++|.++.. ..+..+++|++|++++|+++++. ..+.++++|++|++++|++++.....+..+++|++|++++|.+++
T Consensus 88 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 167 (606)
T 3t6q_A 88 LTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY 167 (606)
T ss_dssp CTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCE
T ss_pred CCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccc
Confidence 999999863 46889999999999999999874 468999999999999999998654555669999999999999874
Q ss_pred ccCCCCccccCcchhhhhhcCCCcc--EEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEc
Q 046275 280 PIPVGYNEFQGEIPLHLADLCSSLV--KLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVL 357 (1176)
Q Consensus 280 ~~p~~~~~l~~~i~~~~~~~l~~L~--~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~L 357 (1176)
. +...+..+++|+ .|++++|.+++..|..+.. .+|+.|++++|... + ..+..+.++....+
T Consensus 168 ~------------~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~---~-~~~~~l~~~~l~~l 230 (606)
T 3t6q_A 168 L------------SKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNL---L-VIFKGLKNSTIQSL 230 (606)
T ss_dssp E------------CHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCH---H-HHHHHTTTCEEEEE
T ss_pred c------------ChhhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhH---H-HHhhhccccchhhe
Confidence 3 333444567888 8999999999777766654 68999999998732 2 34566766665555
Q ss_pred cCcccCC-----CCcccccCCC--CCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEE
Q 046275 358 SFNDFTG-----ALPDSLSNLT--NLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLH 430 (1176)
Q Consensus 358 s~N~l~~-----~~p~~l~~l~--~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 430 (1176)
..+.+.+ ..+..+..+. +|+.|++++|.+++..+..+ ..+++|++|++++|+++ .+|..+.++++|++|+
T Consensus 231 ~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~ 307 (606)
T 3t6q_A 231 WLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTF--HCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLV 307 (606)
T ss_dssp ECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTT--TTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEE
T ss_pred echhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHh--ccccCCCEEeccCCccC-CCChhhcccccCCEEE
Confidence 4443332 2223333333 78999999999986655555 45788999999999998 7888899999999999
Q ss_pred cCCccccCCCCccccCCCccCeeecccccccCCCCCC-CCCccccceeecccccccCcc--ccccccCCCCCeeeccccc
Q 046275 431 LSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPE-LGNIQTLETLFLDFNELTGTL--PAALSNCTNLNWISLSNNH 507 (1176)
Q Consensus 431 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~ 507 (1176)
+++|++++..|..+..+++|++|++++|.+.+.+|.. +..+++|++|++++|++++.. |..+.++++|++|++++|+
T Consensus 308 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~ 387 (606)
T 3t6q_A 308 LSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNE 387 (606)
T ss_dssp CTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCS
T ss_pred CccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCc
Confidence 9999999888889999999999999999998777664 899999999999999999766 7889999999999999999
Q ss_pred cCCCCCccccCCCCCCeEEccCCcccccCCCC-CCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeec
Q 046275 508 LGGEIPTWIGQLSNLAILKLSNNSFYGRIPPE-LGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKN 586 (1176)
Q Consensus 508 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~ 586 (1176)
+++..|..+..+++|++|++++|++.+..|.. +..+++|+.|++++|.+++..|..
T Consensus 388 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~----------------------- 444 (606)
T 3t6q_A 388 PLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQL----------------------- 444 (606)
T ss_dssp CEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTT-----------------------
T ss_pred CCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHH-----------------------
Confidence 99888999999999999999999999877655 889999999999999998654432
Q ss_pred CCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccC---CCccccccccce
Q 046275 587 DGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGS---IPKEIGSMSYLF 663 (1176)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~---iP~~~~~l~~L~ 663 (1176)
+..+.+|++|+|++|++++. .+..++.+++|+
T Consensus 445 ---------------------------------------------~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 445 ---------------------------------------------FDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp ---------------------------------------------TTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred ---------------------------------------------HhCCCCCCEEECCCCCCCccccccchhhccCCCcc
Confidence 23345799999999999973 346799999999
Q ss_pred eeeccCccccccCCccccCcCcccEEEccCccccccCCCCccccccccccccccccccCCCCCC-CCccccCCccccCCC
Q 046275 664 ILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLTGMIPVM-GQFETFQPAKFLNNS 742 (1176)
Q Consensus 664 ~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~ 742 (1176)
.|+|++|++++.+|..|+.+++|++|||++|++++.+|..+.+++.| .|||++|++++.+|.. +.+..+....+.+|+
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 558 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNP 558 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCC
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCC
Confidence 99999999999999999999999999999999999999999999999 9999999999998863 456667777788887
Q ss_pred CCC
Q 046275 743 GLC 745 (1176)
Q Consensus 743 ~l~ 745 (1176)
..|
T Consensus 559 ~~c 561 (606)
T 3t6q_A 559 LDC 561 (606)
T ss_dssp EEC
T ss_pred ccc
Confidence 666
No 9
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=4.5e-54 Score=536.66 Aligned_cols=444 Identities=19% Similarity=0.230 Sum_probs=286.1
Q ss_pred hHHHHHHHHHHhcCCCCC---------CCCCCCCCCCCccc---ceeEeCC-CcEEEEecCCccccccchhhhhhhcCcc
Q 046275 27 NKDLQQLLSFKAALPNPS---------VLPNWSPNQNPCGF---KGVSCKA-ASVSSIDLSPFTLSVDFHLVASFLLTLD 93 (1176)
Q Consensus 27 ~~~~~~ll~~k~~~~~~~---------~l~~w~~~~~cC~W---~gv~C~~-~~v~~l~L~~~~~~~~~~~~~~~l~~~~ 93 (1176)
..|+.||.+||.++.++. ...+|..++|||.| .||+|+. ++|++|+|++.++.+ .++..++.++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g---~lp~~l~~L~ 105 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASG---RVPDAIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEE---EECGGGGGCT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCCCCEEEEEecCcccCC---cCChHHhcCc
Confidence 579999999999986331 34589999999999 9999987 589999999877764 3445677888
Q ss_pred cccccccCCCCCCCcc----------cCCCCCccccCccccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccccc
Q 046275 94 TLETLSLKNSNISGTI----------SLPAGSRCSSFLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGRE 163 (1176)
Q Consensus 94 ~L~~L~L~~n~l~g~~----------~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~ 163 (1176)
+|+.|+|++|.+.... .+|.. .+.+|+ +++++|.+.+..+ ..
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~--~~~~l~-l~l~~~~l~~~~~-------------------------~~ 157 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDE--QKQKMR-MHYQKTFVDYDPR-------------------------ED 157 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHH--HHHHHH-THHHHHHTCCCGG-------------------------GG
T ss_pred cceEEECcCCccccCCccccccccccCchHH--HHHHHH-hhHHHhhhccCch-------------------------hh
Confidence 8888888887653110 00100 012233 3333333332111 00
Q ss_pred cccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCcccccccCCCCCccceeeccCCcccccCCCccCCCCC
Q 046275 164 AGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGDINVSKCKNLQFLDVSSNNFSMAVPSFGDCLAL 243 (1176)
Q Consensus 164 ~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L 243 (1176)
....+..+..+++....+.. .....++.+.+.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~-------------------------------~~~~~l~~l~l~----------------- 189 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK-------------------------------SSRITLKDTQIG----------------- 189 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC-------------------------------CCCCCCCTTTTT-----------------
T ss_pred HHHHHHHHhhcCcccccccc-------------------------------ccccchhhhhhc-----------------
Confidence 00011111111111111110 000111111111
Q ss_pred cEEEcCCCcCCCCcChhhhccccCCeEeeccccccCc------cCCCCccccCcchhhhh-hcCCCccEEEccCCccccc
Q 046275 244 EYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGP------IPVGYNEFQGEIPLHLA-DLCSSLVKLDLSSNNLSGK 316 (1176)
Q Consensus 244 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~------~p~~~~~l~~~i~~~~~-~~l~~L~~L~L~~n~l~~~ 316 (1176)
..+|++++ +|..++++++|++|+|++|.+++. +|.....+.+.+|..+. ..+++|++|+|++|++.+.
T Consensus 190 ----~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~ 264 (636)
T 4eco_A 190 ----QLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTK 264 (636)
T ss_dssp ----CCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSS
T ss_pred ----cccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCcc
Confidence 11234444 444444444444444444444432 00000000001222221 1346677777777777777
Q ss_pred CCccccCCCCCcEEEccCCc-Ccc-cCCHHHHhcC------CCCCEEEccCcccCCCCcc--cccCCCCCCEEEccCCcC
Q 046275 317 VPSRFGSCSSLESFDISSNK-FSG-ELPIEIFLSM------SNLKELVLSFNDFTGALPD--SLSNLTNLETLDLSSNNL 386 (1176)
Q Consensus 317 ~p~~~~~l~~L~~L~Ls~N~-l~~-~i~~~~~~~l------~~L~~L~Ls~N~l~~~~p~--~l~~l~~L~~L~Ls~N~l 386 (1176)
+|..|+++++|++|++++|+ ++| .+|..+ ..+ ++|++|+|++|.++ .+|. .++++++|++|+|++|++
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~-~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l 342 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKDDW-QALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQL 342 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHHHH-HHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCC
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchHHH-HhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcC
Confidence 77778888888888888887 776 677665 333 78888888888888 6777 788888888888888888
Q ss_pred CCCCCccccCCCCCCccEEEccCccccCCCCcccccccc-CcEEEcCCccccCCCCccccCCC--ccCeeecccccccCC
Q 046275 387 SGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQ-LVSLHLSFNYLTGTIPSSLGSLS--KLQDLKLWLNQLHGE 463 (1176)
Q Consensus 387 ~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~ 463 (1176)
+|.+| .+ ..+++|++|+|++|+++ .+|..+.++++ |++|++++|+++ .+|..+..++ +|+.|++++|.+++.
T Consensus 343 ~g~ip-~~--~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~ 417 (636)
T 4eco_A 343 EGKLP-AF--GSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSV 417 (636)
T ss_dssp EEECC-CC--EEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred ccchh-hh--CCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCc
Confidence 87777 44 34567888888888888 77778888888 888888888888 7787777655 788888888888888
Q ss_pred CCCCCC-------CccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccC-CC-------CCCeEEcc
Q 046275 464 IPPELG-------NIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQ-LS-------NLAILKLS 528 (1176)
Q Consensus 464 ~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~-------~L~~L~L~ 528 (1176)
+|..+. .+++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+.. +. +|++|+|+
T Consensus 418 ~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls 496 (636)
T 4eco_A 418 DGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLR 496 (636)
T ss_dssp TTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECC
T ss_pred chhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECc
Confidence 888887 7788888888888888544455667888888999988888 56654333 22 88899999
Q ss_pred CCcccccCCCCCC--CCCCCCEEEccCCCCcccCChhH
Q 046275 529 NNSFYGRIPPELG--DCRSLIWLDLNTNLFNGSIPPAL 564 (1176)
Q Consensus 529 ~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~g~ip~~~ 564 (1176)
+|+++ .+|..+. .+++|+.|+|++|++++ +|..+
T Consensus 497 ~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~ 532 (636)
T 4eco_A 497 FNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQP 532 (636)
T ss_dssp SSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGG
T ss_pred CCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhh
Confidence 99888 7888876 88888888888888876 66543
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.1e-52 Score=520.39 Aligned_cols=509 Identities=19% Similarity=0.142 Sum_probs=435.5
Q ss_pred ccccccccCCCCCCCcccCCCCCccccCccccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccccccccccCCCc
Q 046275 93 DTLETLSLKNSNISGTISLPAGSRCSSFLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREAGSLKLSLE 172 (1176)
Q Consensus 93 ~~L~~L~L~~n~l~g~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~ 172 (1176)
+.+++|+|++|.+++.. +..+..+++|++|||++|.+++..+. .+.++++|++|+|++|+|+.+....+..+++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~--~~~~~~l~~L~~L~Ls~n~l~~i~~~--~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 107 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILK--SYSFSNFSELQWLDLSRCEIETIEDK--AWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLE 107 (606)
T ss_dssp TTCCEEECTTSCCCEEC--TTTTTTCTTCCEEECTTCCCCEECTT--TTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCC
T ss_pred CCcCEEECCCCCcCEeC--hhhccCCccCcEEeCCCCcccccCHH--HhhchhhcCEeECCCCcccccChhhcCCcccCC
Confidence 68999999999998543 45678899999999999999876543 478999999999999999999888899999999
Q ss_pred EEEccCCCCCCCCccccccccCCCCccEEEeCCCcccc---cccCCCCCccceeeccCCcccccCC-CccCCCCCc----
Q 046275 173 VLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTG---DINVSKCKNLQFLDVSSNNFSMAVP-SFGDCLALE---- 244 (1176)
Q Consensus 173 ~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~---~~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~---- 244 (1176)
+|+|++|++++ ++...|.++++|++|++++|.+++ +..+..+++|++|++++|+++++++ .+..+.+|+
T Consensus 108 ~L~L~~n~l~~---~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~ 184 (606)
T 3vq2_A 108 NLVAVETKLAS---LESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNL 184 (606)
T ss_dssp EEECTTSCCCC---SSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCC
T ss_pred EEEccCCcccc---ccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccc
Confidence 99999999987 454558999999999999999985 4568999999999999999998765 477776665
Q ss_pred EEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccc------cCC
Q 046275 245 YLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSG------KVP 318 (1176)
Q Consensus 245 ~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~------~~p 318 (1176)
+|++++|.+++..+..+... +|++|++++|.+++ ......+..+++|+.+++..+.+.+ ..+
T Consensus 185 ~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~-----------~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~ 252 (606)
T 3vq2_A 185 SLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSS-----------NIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEP 252 (606)
T ss_dssp EEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCH-----------HHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCG
T ss_pred eeeccCCCcceeCcccccCc-eeeeeeccCCccch-----------hHHHHHhccccccccccccccccccCCcccccCh
Confidence 89999999998777777665 89999999998863 2223344567889988886555432 111
Q ss_pred ccccCCC--CCcEEEc-cCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCcccc
Q 046275 319 SRFGSCS--SLESFDI-SSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLC 395 (1176)
Q Consensus 319 ~~~~~l~--~L~~L~L-s~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 395 (1176)
..+..+. +++.+++ ..|.+++.+|. |..+++|++|++++|.++ .+| .+..+++|++|++++|.+ +.+|. +
T Consensus 253 ~~~~~l~~l~l~~l~l~~~~~~~~~~~~--~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp~-~- 325 (606)
T 3vq2_A 253 SIMEGLCDVTIDEFRLTYTNDFSDDIVK--FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFPT-L- 325 (606)
T ss_dssp GGGTTGGGSEEEEEEECCCTTCCGGGGS--CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCCC-C-
T ss_pred HHhhhhhhccHhheeccccccccccccc--cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-ccccc-C-
Confidence 2222222 4677777 77888877775 789999999999999997 556 899999999999999999 58883 3
Q ss_pred CCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCC--CCccccCCCccCeeecccccccCCCCCCCCCccc
Q 046275 396 QGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGT--IPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQT 473 (1176)
Q Consensus 396 ~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 473 (1176)
.+++|++|++++|...+.. .+..+++|++|++++|++++. +|..+..+++|++|++++|.+. .+|..+..+++
T Consensus 326 --~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~ 400 (606)
T 3vq2_A 326 --DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEE 400 (606)
T ss_dssp --CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTT
T ss_pred --CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCC
Confidence 5789999999999765444 677899999999999999865 4889999999999999999998 47789999999
Q ss_pred cceeecccccccCccc-cccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccc-cCCCCCCCCCCCCEEEc
Q 046275 474 LETLFLDFNELTGTLP-AALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYG-RIPPELGDCRSLIWLDL 551 (1176)
Q Consensus 474 L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L 551 (1176)
|++|++++|++++..| ..|.++++|++|++++|++++..|..++.+++|++|+|++|++++ .+|..++.+++|+.|+|
T Consensus 401 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L 480 (606)
T 3vq2_A 401 LQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDL 480 (606)
T ss_dssp CCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred CCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEEC
Confidence 9999999999998887 789999999999999999999999999999999999999999998 47999999999999999
Q ss_pred cCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCC
Q 046275 552 NTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPT 631 (1176)
Q Consensus 552 ~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 631 (1176)
++|++++..|..
T Consensus 481 s~n~l~~~~~~~-------------------------------------------------------------------- 492 (606)
T 3vq2_A 481 SKCQLEQISWGV-------------------------------------------------------------------- 492 (606)
T ss_dssp TTSCCCEECTTT--------------------------------------------------------------------
T ss_pred CCCcCCccChhh--------------------------------------------------------------------
Confidence 999998755432
Q ss_pred cCCCCCccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcC-cccEEEccCccccccCC
Q 046275 632 FNHNGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLR-GLNILDLSSNRLEGTIP 701 (1176)
Q Consensus 632 ~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~-~L~~L~Ls~N~l~g~iP 701 (1176)
|..+.+|++|+|++|++++.+|..|+++++|+.|+|++|+|+ .+|..+..++ +|++|++++|.+.+..|
T Consensus 493 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 493 FDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp TTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred hcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 233467999999999999999999999999999999999999 8998899997 69999999999997655
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-51 Score=529.47 Aligned_cols=528 Identities=23% Similarity=0.194 Sum_probs=405.7
Q ss_pred cccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEE
Q 046275 122 SSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQL 201 (1176)
Q Consensus 122 ~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L 201 (1176)
+..|.+++.++..+. ..++|++|+|++|.|+.+....+..+++|++|||++|.+.. .++...|.++++|++|
T Consensus 7 ~~~dcs~~~L~~vP~------lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~--~i~~~~f~~L~~L~~L 78 (844)
T 3j0a_A 7 RIAFYRFCNLTQVPQ------VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPL--TIDKEAFRNLPNLRIL 78 (844)
T ss_dssp EEEEESCCCSSCCCS------SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCC--EECTTTTSSCTTCCEE
T ss_pred eEEEccCCCCCCCCC------CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCcc--ccCHHHhcCCCCCCEE
Confidence 357788888876543 34789999999999999988889999999999999996543 3666778999999999
Q ss_pred EeCCCcccc--cccCCCCCccceeeccCCccccc-CCC--ccCCCCCcEEEcCCCcCCCCcC-hhhhccccCCeEeeccc
Q 046275 202 ALKGNKVTG--DINVSKCKNLQFLDVSSNNFSMA-VPS--FGDCLALEYLDISANKFTGDVG-HAISACEHLSFLNVSSN 275 (1176)
Q Consensus 202 ~L~~n~l~~--~~~~~~l~~L~~L~Ls~N~l~~~-~~~--l~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~Ls~N 275 (1176)
+|++|.+.. +..+..+++|++|+|++|.+++. ++. +.++++|++|+|++|.+++..+ ..|+++++|++|+|++|
T Consensus 79 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N 158 (844)
T 3j0a_A 79 DLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSN 158 (844)
T ss_dssp ECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESS
T ss_pred ECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCC
Confidence 999999986 45688999999999999999863 333 8899999999999999987755 67899999999999999
Q ss_pred cccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccccCCCC------CcEEEccCCcCcccCCHHHHhc-
Q 046275 276 LFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGSCSS------LESFDISSNKFSGELPIEIFLS- 348 (1176)
Q Consensus 276 ~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~------L~~L~Ls~N~l~~~i~~~~~~~- 348 (1176)
.+++..|..+..+. .++|+.|+|++|.+.+..|..+..+++ |++|++++|.+++.++..+...
T Consensus 159 ~i~~~~~~~l~~l~----------~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l 228 (844)
T 3j0a_A 159 QIFLVCEHELEPLQ----------GKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAI 228 (844)
T ss_dssp CCCCCCSGGGHHHH----------HCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTS
T ss_pred cCCeeCHHHccccc----------CCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhc
Confidence 99866555433221 168999999999999888877777665 9999999999887777665433
Q ss_pred -CCCCCEEEccCc---------ccCCCCcccccCC--CCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCC
Q 046275 349 -MSNLKELVLSFN---------DFTGALPDSLSNL--TNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSI 416 (1176)
Q Consensus 349 -l~~L~~L~Ls~N---------~l~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~ 416 (1176)
.++++.|.++.+ .+.+..+..+..+ ++|+.|+|++|.+.+..|..+ ..+++|+.|+|++|++++..
T Consensus 229 ~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~--~~l~~L~~L~L~~n~i~~~~ 306 (844)
T 3j0a_A 229 SKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVF--ETLKDLKVLNLAYNKINKIA 306 (844)
T ss_dssp CSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCS--SSCCCCCEEEEESCCCCEEC
T ss_pred CcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhh--hcCCCCCEEECCCCcCCCCC
Confidence 256888887743 3333333444443 567777887777776555554 34567777777777777777
Q ss_pred CccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCC
Q 046275 417 PSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCT 496 (1176)
Q Consensus 417 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 496 (1176)
|..|.++++|++|+|++|++++..|..|..+++|+.|++++|.+.+..+..|..+++|++|+|++|.+++ ++ .++
T Consensus 307 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~----~~~ 381 (844)
T 3j0a_A 307 DEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-IH----FIP 381 (844)
T ss_dssp TTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-CS----SCC
T ss_pred hHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-cc----CCC
Confidence 7777777777777777777776667777777777777777777776666677777777777777777773 22 266
Q ss_pred CCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccC-CCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhh
Q 046275 497 NLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRI-PPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANF 575 (1176)
Q Consensus 497 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~ 575 (1176)
+|+.|++++|+++ .+|.. ..+++.|++++|++++.. +..+..+++|+.|+|++|++++..+..
T Consensus 382 ~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~------------ 445 (844)
T 3j0a_A 382 SIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQ------------ 445 (844)
T ss_dssp SCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSS------------
T ss_pred CcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCccccccccc------------
Confidence 7777777777777 45543 456777777777776421 123456777777777777776422110
Q ss_pred ccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCc-----c
Q 046275 576 IVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLS-----G 650 (1176)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~-----g 650 (1176)
.+....+|+.|+|++|.++ +
T Consensus 446 -------------------------------------------------------~~~~~~~L~~L~Ls~N~l~~~~~~~ 470 (844)
T 3j0a_A 446 -------------------------------------------------------TPSENPSLEQLFLGENMLQLAWETE 470 (844)
T ss_dssp -------------------------------------------------------SSCSCTTCCBCEEESCCCSSSCCSC
T ss_pred -------------------------------------------------------ccccCCccccccCCCCccccccccc
Confidence 1223457899999999998 5
Q ss_pred CCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCccccccccccccccccccCCCCCCCCc
Q 046275 651 SIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLTGMIPVMGQF 730 (1176)
Q Consensus 651 ~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~g~~p~~~~~ 730 (1176)
..|..|.++++|+.|+|++|+|++.+|..|+.+++|+.|+|++|+|++..|..+. ++|+.|||++|+|+|.+|.. +
T Consensus 471 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~ 546 (844)
T 3j0a_A 471 LCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--F 546 (844)
T ss_dssp CCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--C
T ss_pred cchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--h
Confidence 5567899999999999999999999999999999999999999999976666665 89999999999999999964 5
Q ss_pred cccCCccccCCCCCCCCCC
Q 046275 731 ETFQPAKFLNNSGLCGLPL 749 (1176)
Q Consensus 731 ~~~~~~~~~~n~~l~~~~~ 749 (1176)
..+....+.+|+..|..++
T Consensus 547 ~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 547 VSLSVLDITHNKFICECEL 565 (844)
T ss_dssp SSCCEEEEEEECCCCSSSC
T ss_pred CCcCEEEecCCCccccccc
Confidence 5777788999999997654
No 12
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.9e-53 Score=532.53 Aligned_cols=540 Identities=19% Similarity=0.229 Sum_probs=345.1
Q ss_pred ChHHHHHHHHHHhcCCCCCCCCCCCCCC-----CC--ccc------------ceeEeCC-CcEEEEecCCccccccchhh
Q 046275 26 PNKDLQQLLSFKAALPNPSVLPNWSPNQ-----NP--CGF------------KGVSCKA-ASVSSIDLSPFTLSVDFHLV 85 (1176)
Q Consensus 26 ~~~~~~~ll~~k~~~~~~~~l~~w~~~~-----~c--C~W------------~gv~C~~-~~v~~l~L~~~~~~~~~~~~ 85 (1176)
..+|+.||++||+++.+| +|+.++ +| |.| .||+|+. ++|++|+|++.++.+ .+
T Consensus 267 ~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G---~i 339 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKG---RV 339 (876)
T ss_dssp HHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEE---EE
T ss_pred chHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCC---cC
Confidence 367999999999999877 887554 55 999 9999995 689999998877763 34
Q ss_pred hhhhcCccccccccc-CCCCCCCcccCCCCCccccCccccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCcccccc
Q 046275 86 ASFLLTLDTLETLSL-KNSNISGTISLPAGSRCSSFLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREA 164 (1176)
Q Consensus 86 ~~~l~~~~~L~~L~L-~~n~l~g~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~ 164 (1176)
+..++++++|+.|+| ++|.++|...+.. .. + .++++...+. .++..++. .-+...+
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~-~~----~-~~~l~~~~l~-------------~lr~~~~~-~~l~~~~--- 396 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGD-EE----L-TPDMSEERKH-------------RIRMHYKK-MFLDYDQ--- 396 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTT-BC----C-CSSCCHHHHH-------------HHHTHHHH-HHTCCCG---
T ss_pred chHHhccccceEeeecccccccccccccc-cc----c-ccccchhHHH-------------HHHHhhhh-hhhccCc---
Confidence 466777777888888 7777766421110 00 0 1111111100 00000000 0000000
Q ss_pred ccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCcccccccCCCCCccceeeccC--CcccccCCCccCCCC
Q 046275 165 GSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGDINVSKCKNLQFLDVSS--NNFSMAVPSFGDCLA 242 (1176)
Q Consensus 165 ~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~--N~l~~~~~~l~~l~~ 242 (1176)
...++. +....+...+... .........++.+.+.. |+++++|+.++++++
T Consensus 397 -------------~~~~s~---l~~~~l~~~~~~~-----------~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~ 449 (876)
T 4ecn_A 397 -------------RLNLSD---LLQDAINRNPEMK-----------PIKKDSRISLKDTQIGNLTNRITFISKAIQRLTK 449 (876)
T ss_dssp -------------GGGSCH---HHHHHHHTCTTSC-----------CCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTT
T ss_pred -------------chhhhH---HHHHHhhhCcccc-----------ccccccccchhhceeccccCcccchhHHHhcCCC
Confidence 000000 0000000000000 00001112233333332 555555555666666
Q ss_pred CcEEEcCCCcCCCC-cChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccc
Q 046275 243 LEYLDISANKFTGD-VGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRF 321 (1176)
Q Consensus 243 L~~L~Ls~N~l~~~-~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~ 321 (1176)
|++|+|++|+|++. ++... +..+.|.++|.+|..+. +..+++|++|+|++|++.+.+|..|
T Consensus 450 L~~L~Ls~N~Lsg~~i~~~~--------~~~s~n~~~g~iP~~l~----------f~~L~~L~~L~Ls~N~l~~~iP~~l 511 (876)
T 4ecn_A 450 LQIIYFANSPFTYDNIAVDW--------EDANSDYAKQYENEELS----------WSNLKDLTDVELYNCPNMTQLPDFL 511 (876)
T ss_dssp CCEEEEESCCCCGGGBSSSC--------SCTTSHHHHHHTTSCCC----------GGGCTTCCEEEEESCTTCCSCCGGG
T ss_pred CCEEECcCCcCCCCcccccc--------cccccccccccCChhhh----------hccCCCCCEEECcCCCCCccChHHH
Confidence 66666666666541 11000 01111222223333321 2234677777777777777777777
Q ss_pred cCCCCCcEEEccCCc-Ccc-cCCHHHH------hcCCCCCEEEccCcccCCCCcc--cccCCCCCCEEEccCCcCCCCCC
Q 046275 322 GSCSSLESFDISSNK-FSG-ELPIEIF------LSMSNLKELVLSFNDFTGALPD--SLSNLTNLETLDLSSNNLSGAIP 391 (1176)
Q Consensus 322 ~~l~~L~~L~Ls~N~-l~~-~i~~~~~------~~l~~L~~L~Ls~N~l~~~~p~--~l~~l~~L~~L~Ls~N~l~~~~p 391 (1176)
+++++|++|+|++|+ ++| .+|..+. ..+++|++|+|++|.++ .+|. .++++++|+.|+|++|+++ .+|
T Consensus 512 ~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp 589 (876)
T 4ecn_A 512 YDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE 589 (876)
T ss_dssp GGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC
T ss_pred hCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch
Confidence 888888888888887 776 6666532 12347888888888887 6777 7788888888888888887 677
Q ss_pred ccccCCCCCCccEEEccCccccCCCCcccccccc-CcEEEcCCccccCCCCccccCCCc--cCeeecccccccCCCCCC-
Q 046275 392 HNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQ-LVSLHLSFNYLTGTIPSSLGSLSK--LQDLKLWLNQLHGEIPPE- 467 (1176)
Q Consensus 392 ~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p~~- 467 (1176)
.+ ..+++|+.|+|++|+++ .+|..+.++++ |+.|+|++|+++ .+|..+..++. |+.|+|++|++.+.+|..
T Consensus 590 -~~--~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~ 664 (876)
T 4ecn_A 590 -AF--GTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNIS 664 (876)
T ss_dssp -CC--CTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCS
T ss_pred -hh--cCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccch
Confidence 44 45677888888888887 77777888887 888888888888 67777776654 888888888887766532
Q ss_pred --CC--CccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCC--------CCCeEEccCCccccc
Q 046275 468 --LG--NIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLS--------NLAILKLSNNSFYGR 535 (1176)
Q Consensus 468 --~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--------~L~~L~L~~N~l~~~ 535 (1176)
++ .+++|+.|+|++|+++...+..+..+++|+.|+|++|+|+ .+|..+.... +|++|+|++|+++ .
T Consensus 665 ~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~ 742 (876)
T 4ecn_A 665 CSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-S 742 (876)
T ss_dssp SCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-C
T ss_pred hhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-c
Confidence 22 3347888888888888433334457888888888888888 6666554432 7888888888888 7
Q ss_pred CCCCCC--CCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccc
Q 046275 536 IPPELG--DCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRIS 613 (1176)
Q Consensus 536 ~p~~~~--~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 613 (1176)
+|..+. .+++|+.|+|++|++++ +|..++
T Consensus 743 lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~------------------------------------------------ 773 (876)
T 4ecn_A 743 LSDDFRATTLPYLSNMDVSYNCFSS-FPTQPL------------------------------------------------ 773 (876)
T ss_dssp CCGGGSTTTCTTCCEEECCSSCCSS-CCCGGG------------------------------------------------
T ss_pred chHHhhhccCCCcCEEEeCCCCCCc-cchhhh------------------------------------------------
Confidence 888876 88888888888888886 665432
Q ss_pred cCCCCccccccCCCCCCCcCCCCCccEEEccc------CcCccCCCccccccccceeeeccCccccccCCccccCcCccc
Q 046275 614 TRSPCNFTRVYGGHTQPTFNHNGSMMFLDISY------NMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLN 687 (1176)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~------N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~ 687 (1176)
.+.+|+.|+|++ |++.+.+|..|+++++|+.|+|++|+| +.||..+. ++|+
T Consensus 774 --------------------~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~ 830 (876)
T 4ecn_A 774 --------------------NSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLY 830 (876)
T ss_dssp --------------------GCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSC
T ss_pred --------------------cCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCC
Confidence 123567777765 778888888888888888888888888 58888766 5888
Q ss_pred EEEccCccccccCCCCcccccccccccccccccc
Q 046275 688 ILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLT 721 (1176)
Q Consensus 688 ~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~ 721 (1176)
.|||++|++...-+..+.....+..+.|++|++.
T Consensus 831 ~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 831 ILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp EEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred EEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 8888888887666667767777777777777654
No 13
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-50 Score=451.96 Aligned_cols=264 Identities=26% Similarity=0.435 Sum_probs=217.0
Q ss_pred cCCCCCceEeEeCceEEEEEEEC------CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK------DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLL 933 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 933 (1176)
++|.+.+.||+|+||+||+|++. ++..||||++........++|.+|++++++++|||||+++|+|.+++..|+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46788899999999999999874 467899999976655556789999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHHhhcc---------ccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEE
Q 046275 934 VYEYMRYGSLEDVLHNQK---------KVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARV 1004 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 1004 (1176)
|||||++|+|.++++..+ .....++|.+++.++.|||+||+|||++ +||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 999999999999998653 1234699999999999999999999999 9999999999999999999999
Q ss_pred EeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhh
Q 046275 1005 SDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHA 1083 (1176)
Q Consensus 1005 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 1083 (1176)
+|||+|+.....+.........||+.|||||++.+..|+.++|||||||++|||+| |+.||...+ ..+......
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~-----~~~~~~~i~ 244 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS-----NNEVIECIT 244 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHH
Confidence 99999987655444333345679999999999999999999999999999999999 999997543 222333333
Q ss_pred ccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCC
Q 046275 1084 KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSG 1142 (1176)
Q Consensus 1084 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~ 1142 (1176)
.+... ......|. ++.+++.+||+.||++|||+++|.+.|+++.+.++
T Consensus 245 ~~~~~-----~~p~~~~~------~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p 292 (299)
T 4asz_A 245 QGRVL-----QRPRTCPQ------EVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292 (299)
T ss_dssp HTCCC-----CCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred cCCCC-----CCCccchH------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence 32211 11112221 35569999999999999999999999999987654
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-48 Score=484.45 Aligned_cols=492 Identities=21% Similarity=0.182 Sum_probs=330.3
Q ss_pred cCccccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCc
Q 046275 119 SFLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDEL 198 (1176)
Q Consensus 119 ~~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L 198 (1176)
+++++|||++|.+++..+ ..+..+++|++|+|++|+|+.++...+..+++|++|+|++|++++ ++...
T Consensus 28 ~~l~~L~Ls~n~l~~~~~--~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~---~~~~~------- 95 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGS--YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS---LALGA------- 95 (570)
T ss_dssp SSCCEEECCSCCCCEECT--TTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE---ECTTT-------
T ss_pred ccccEEEccCCccCccCh--hHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCc---cCHhh-------
Confidence 345556666665554322 134555555555555555555555555555555555555555543 33333
Q ss_pred cEEEeCCCcccccccCCCCCccceeeccCCcccccCC-CccCCCCCcEEEcCCCcCCCC-cChhhhccccCCeEeecccc
Q 046275 199 KQLALKGNKVTGDINVSKCKNLQFLDVSSNNFSMAVP-SFGDCLALEYLDISANKFTGD-VGHAISACEHLSFLNVSSNL 276 (1176)
Q Consensus 199 ~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~-~~~~l~~l~~L~~L~Ls~N~ 276 (1176)
+..+++|++|++++|+++.+++ .++++++|++|++++|.+++. +|..++++++|++|++++|.
T Consensus 96 ---------------~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~ 160 (570)
T 2z63_A 96 ---------------FSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (570)
T ss_dssp ---------------TTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSC
T ss_pred ---------------hcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCc
Confidence 4445555555555555554443 355555555555555555542 35555555555555555555
Q ss_pred ccCccCCCCccccCcchhhhhhcCCCc----cEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCC
Q 046275 277 FSGPIPVGYNEFQGEIPLHLADLCSSL----VKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNL 352 (1176)
Q Consensus 277 l~~~~p~~~~~l~~~i~~~~~~~l~~L----~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L 352 (1176)
+++..|..+ ..+++| +.|++++|.+++..|..+..+ +|+.|++++|..........+..++++
T Consensus 161 l~~~~~~~~------------~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l 227 (570)
T 2z63_A 161 IQSIYCTDL------------RVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGL 227 (570)
T ss_dssp CCEECGGGG------------HHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTC
T ss_pred cceecHHHc------------cchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCcccc
Confidence 553322221 112233 556666666655555555444 566666666544322222334555555
Q ss_pred CEEEccCcccCC------CCcccccCCC--CCCEEEccCC-cCCCCCCccccCCCCCCccEEEccCccccCCCCcccccc
Q 046275 353 KELVLSFNDFTG------ALPDSLSNLT--NLETLDLSSN-NLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNC 423 (1176)
Q Consensus 353 ~~L~Ls~N~l~~------~~p~~l~~l~--~L~~L~Ls~N-~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l 423 (1176)
+.+.+..+.+.. .....+..+. .++.+++++| .+.+.+|..+ ..+++|+.|++++|.++ .+|..+..+
T Consensus 228 ~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~--~~l~~L~~L~l~~~~l~-~l~~~~~~~ 304 (570)
T 2z63_A 228 EVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLF--NCLTNVSSFSLVSVTIE-RVKDFSYNF 304 (570)
T ss_dssp EEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTT--GGGTTCSEEEEESCEEC-SCCBCCSCC
T ss_pred ceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhh--cCcCcccEEEecCccch-hhhhhhccC
Confidence 555544322211 1111222222 2456666666 5555556555 23567777777777777 567777777
Q ss_pred ccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCcc--ccccccCCCCCee
Q 046275 424 SQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTL--PAALSNCTNLNWI 501 (1176)
Q Consensus 424 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L 501 (1176)
+|++|++++|+++ .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. |..+.++++|++|
T Consensus 305 -~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L 378 (570)
T 2z63_A 305 -GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYL 378 (570)
T ss_dssp -CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEE
T ss_pred -CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEE
Confidence 8888888888887 5555 4678888888888888766655 67888999999999988654 7788899999999
Q ss_pred eccccccCCCCCccccCCCCCCeEEccCCcccccCC-CCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccc
Q 046275 502 SLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP-PELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKK 580 (1176)
Q Consensus 502 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~ 580 (1176)
++++|++++. |..+..+++|++|++++|.+.+..| ..+..+++|+.|++++|.+.+.+|..
T Consensus 379 ~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~----------------- 440 (570)
T 2z63_A 379 DLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI----------------- 440 (570)
T ss_dssp ECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTT-----------------
T ss_pred ECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhh-----------------
Confidence 9999999854 4448899999999999999987766 56888999999999999887654432
Q ss_pred eeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCc-cCCCcccccc
Q 046275 581 YVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLS-GSIPKEIGSM 659 (1176)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~-g~iP~~~~~l 659 (1176)
|..+.+|++|+|++|+++ +.+|..++.+
T Consensus 441 ---------------------------------------------------~~~l~~L~~L~l~~n~l~~~~~p~~~~~l 469 (570)
T 2z63_A 441 ---------------------------------------------------FNGLSSLEVLKMAGNSFQENFLPDIFTEL 469 (570)
T ss_dssp ---------------------------------------------------TTTCTTCCEEECTTCEEGGGEECSCCTTC
T ss_pred ---------------------------------------------------hhcCCcCcEEECcCCcCccccchhhhhcc
Confidence 233457889999999998 6899999999
Q ss_pred ccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCccccccccccccccccccCCCCCCC
Q 046275 660 SYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLTGMIPVMG 728 (1176)
Q Consensus 660 ~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~g~~p~~~ 728 (1176)
++|+.|+|++|++++..|..|+.+++|++|+|++|++++.+|..+..+++|+.|++++|++++.+|...
T Consensus 470 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 470 RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred cCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchH
Confidence 999999999999998889999999999999999999998888889999999999999999999998754
No 15
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=6.6e-50 Score=452.76 Aligned_cols=263 Identities=26% Similarity=0.424 Sum_probs=208.5
Q ss_pred cCCCCCceEeEeCceEEEEEEEC------CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK------DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLL 933 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 933 (1176)
++|.+.+.||+|+||+||+|+++ +++.||||++........++|.+|++++++++|||||+++|+|.++...|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45777889999999999999874 478899999976655556789999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHHhhcccc-----------CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcE
Q 046275 934 VYEYMRYGSLEDVLHNQKKV-----------GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEA 1002 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~-----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 1002 (1176)
|||||++|+|.++++..... ..+++|.+++.|+.|||+||+|||+. +||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 99999999999999865321 23699999999999999999999999 99999999999999999999
Q ss_pred EEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHH
Q 046275 1003 RVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQ 1081 (1176)
Q Consensus 1003 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~ 1081 (1176)
||+|||+|+.....+.........||+.|||||++.+..++.++|||||||++|||+| |+.||.... ..+....
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~-----~~~~~~~ 272 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS-----NTEAIDC 272 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC-----HHHHHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Confidence 9999999987655444434455689999999999999999999999999999999999 999997543 1222222
Q ss_pred hhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1082 HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1082 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
...+. .+......+. .+.+++.+||+.||++|||++||+++|+.+.+..
T Consensus 273 i~~g~-----~~~~p~~~~~------~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 273 ITQGR-----ELERPRACPP------EVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp HHHTC-----CCCCCTTCCH------HHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred HHcCC-----CCCCcccccH------HHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 22221 1111122221 3556999999999999999999999999998754
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-48 Score=479.19 Aligned_cols=492 Identities=21% Similarity=0.162 Sum_probs=359.9
Q ss_pred ccccccccCCCCCCCcccCCCCCccccCccccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccccccccccCCCc
Q 046275 93 DTLETLSLKNSNISGTISLPAGSRCSSFLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREAGSLKLSLE 172 (1176)
Q Consensus 93 ~~L~~L~L~~n~l~g~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~ 172 (1176)
+.++.|+|++|.+++.. +..+..+++|++|||++|.+++..+ ..++.+++|++|+|++|+++.++...+..+++|+
T Consensus 28 ~~l~~L~Ls~n~l~~~~--~~~~~~l~~L~~L~Ls~n~i~~i~~--~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLG--SYSFFSFPELQVLDLSRCEIQTIED--GAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQ 103 (570)
T ss_dssp SSCCEEECCSCCCCEEC--TTTTTTCSSCCEEECTTCCCCEECT--TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred ccccEEEccCCccCccC--hhHhhCCCCceEEECCCCcCCccCc--ccccCchhCCEEeCcCCcCCccCHhhhcCccccc
Confidence 57999999999998543 4466788999999999999986544 3578999999999999999999989999999999
Q ss_pred EEEccCCCCCCCCccccccccCCCCccEEEeCCCcccccccCCCCCccceeeccCCcccccCCCccCCCCCcEEEcCCCc
Q 046275 173 VLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGDINVSKCKNLQFLDVSSNNFSMAVPSFGDCLALEYLDISANK 252 (1176)
Q Consensus 173 ~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~ 252 (1176)
+|++++|+++.+ +...|.++++|++|++++|.++.. .++..+.++++|++|++++|+
T Consensus 104 ~L~L~~n~l~~l---~~~~~~~l~~L~~L~L~~n~l~~~--------------------~lp~~~~~l~~L~~L~l~~n~ 160 (570)
T 2z63_A 104 KLVAVETNLASL---ENFPIGHLKTLKELNVAHNLIQSF--------------------KLPEYFSNLTNLEHLDLSSNK 160 (570)
T ss_dssp EEECTTSCCCCS---TTCSCTTCTTCCEEECCSSCCCCC--------------------CCCGGGGGCTTCCEEECTTSC
T ss_pred cccccccccccC---CCccccccccccEEecCCCcccee--------------------cChhhhcccCCCCEEeCcCCc
Confidence 999999999874 333345555555555555544430 023345555555555555555
Q ss_pred CCCCcChhhhccccC----CeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCccc-ccCCccccCCCCC
Q 046275 253 FTGDVGHAISACEHL----SFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLS-GKVPSRFGSCSSL 327 (1176)
Q Consensus 253 l~~~~~~~l~~l~~L----~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L 327 (1176)
+++..+..++.+++| +.|++++|.+++..|..+. . .+|+.|++++|... ..++..+..++++
T Consensus 161 l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~------------~-~~L~~L~l~~n~~~~~~~~~~~~~l~~l 227 (570)
T 2z63_A 161 IQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK------------E-IRLHKLTLRNNFDSLNVMKTCIQGLAGL 227 (570)
T ss_dssp CCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTT------------T-CEEEEEEEESCCSCTTHHHHHHHTTTTC
T ss_pred cceecHHHccchhccchhhhhcccCCCCceecCHHHhc------------c-CcceeEecccccccccchhhhhcCcccc
Confidence 555555555555555 5555555555543332221 1 14555555555332 1233444555555
Q ss_pred cEEEccCCcCc-----ccCCHHHHhcCC--CCCEEEccCc-ccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCC
Q 046275 328 ESFDISSNKFS-----GELPIEIFLSMS--NLKELVLSFN-DFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPR 399 (1176)
Q Consensus 328 ~~L~Ls~N~l~-----~~i~~~~~~~l~--~L~~L~Ls~N-~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 399 (1176)
+.+.+..+.+. ..++...|..++ .++.++++++ .+.+..|..+..+++|+.|++++|.++ .+|..+. ..
T Consensus 228 ~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~--~~ 304 (570)
T 2z63_A 228 EVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSY--NF 304 (570)
T ss_dssp EEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCS--CC
T ss_pred ceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhc--cC
Confidence 55544332221 123333333333 2566677766 666677777777888888888888777 5666553 23
Q ss_pred CCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCC--CCCCCCcccccee
Q 046275 400 NSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEI--PPELGNIQTLETL 477 (1176)
Q Consensus 400 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L 477 (1176)
+|++|++++|.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|.+++.. |..+..+++|++|
T Consensus 305 -~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L 378 (570)
T 2z63_A 305 -GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYL 378 (570)
T ss_dssp -CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEE
T ss_pred -CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEE
Confidence 7888888888877 4554 4677888888888888766554 67788888888888887554 6778888899999
Q ss_pred ecccccccCccccccccCCCCCeeeccccccCCCCC-ccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCC
Q 046275 478 FLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIP-TWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLF 556 (1176)
Q Consensus 478 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 556 (1176)
++++|++++..+. +.++++|+.|++++|++++..| ..+..+++|++|++++|.+.+.+|..+..+++|+.|+|++|++
T Consensus 379 ~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 457 (570)
T 2z63_A 379 DLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSF 457 (570)
T ss_dssp ECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEE
T ss_pred ECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcC
Confidence 9999999855444 9999999999999999987666 5788999999999999999988999999999999999999988
Q ss_pred c-ccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCC
Q 046275 557 N-GSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHN 635 (1176)
Q Consensus 557 ~-g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (1176)
+ +.+|. .+..+
T Consensus 458 ~~~~~p~--------------------------------------------------------------------~~~~l 469 (570)
T 2z63_A 458 QENFLPD--------------------------------------------------------------------IFTEL 469 (570)
T ss_dssp GGGEECS--------------------------------------------------------------------CCTTC
T ss_pred ccccchh--------------------------------------------------------------------hhhcc
Confidence 6 34442 12344
Q ss_pred CCccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccccCCC
Q 046275 636 GSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPS 702 (1176)
Q Consensus 636 ~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~ 702 (1176)
.+|++|||++|++++.+|..|+++++|+.|+|++|++++..|..|+.+++|+.|+|++|++++..|.
T Consensus 470 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 470 RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred cCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 6789999999999999999999999999999999999988888899999999999999999998875
No 17
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.8e-49 Score=443.27 Aligned_cols=258 Identities=24% Similarity=0.367 Sum_probs=210.7
Q ss_pred CCCCCceEeEeCceEEEEEEEC------CCCEEEEEEeeccC-CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEE
Q 046275 861 GFHNDSLIGSGGFGDVYKAKLK------DGSTVAIKKLIHIS-GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLL 933 (1176)
Q Consensus 861 ~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 933 (1176)
++++.+.||+|+||+||+|++. +++.||||++.... ....++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3556789999999999999863 46789999986533 3345789999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHHhhccc------------cCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCc
Q 046275 934 VYEYMRYGSLEDVLHNQKK------------VGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFE 1001 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 1001 (1176)
|||||++|+|.++++.... ....++|.++..|+.|||+||+|||++ +||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 9999999999999975431 123689999999999999999999999 9999999999999999999
Q ss_pred EEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHH
Q 046275 1002 ARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVK 1080 (1176)
Q Consensus 1002 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~ 1080 (1176)
+||+|||+|+.....+.........||+.|||||++.+..|+.++|||||||++|||+| |+.||.... ..+...
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~-----~~~~~~ 258 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-----NQDVVE 258 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC-----HHHHHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC-----HHHHHH
Confidence 99999999987755444444456789999999999999999999999999999999999 899997543 222233
Q ss_pred HhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 046275 1081 QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 1137 (1176)
Q Consensus 1081 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i 1137 (1176)
....+... ......|. .+.+++.+||+.||++||||+||+++|+.+
T Consensus 259 ~i~~~~~~-----~~p~~~~~------~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 259 MIRNRQVL-----PCPDDCPA------WVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHTTCCC-----CCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHcCCCC-----CCcccchH------HHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 33222211 11122222 355699999999999999999999999864
No 18
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.8e-48 Score=480.55 Aligned_cols=485 Identities=20% Similarity=0.197 Sum_probs=386.9
Q ss_pred CcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCccccc--ccCCCCCccceee
Q 046275 147 LKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGD--INVSKCKNLQFLD 224 (1176)
Q Consensus 147 L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~ 224 (1176)
.-+.++++|+++.+|...+ ++|++|||++|+|++ ++...|.++++|++|+|++|.+++. ..+..+++|++|+
T Consensus 7 ~~~c~~~~~~l~~ip~~~~---~~L~~L~Ls~n~l~~---~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 7 SGVCDGRSRSFTSIPSGLT---AAMKSLDLSFNKITY---IGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp TSEEECTTSCCSSCCSCCC---TTCCEEECCSSCCCE---ECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CceEECCCCccccccccCC---CCccEEECcCCccCc---cChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 3345666666666665443 466777777777764 3444566777777777777777653 3477888899999
Q ss_pred ccCCcccccCCC-ccCCCCCcEEEcCCCcCCCC-cChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCC
Q 046275 225 VSSNNFSMAVPS-FGDCLALEYLDISANKFTGD-VGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSS 302 (1176)
Q Consensus 225 Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~-~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~ 302 (1176)
+++|++++.++. ++++++|++|+|++|++++. .+..+.++++|++|++++|.+.+.+| ...+..+++
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~-----------~~~~~~l~~ 149 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIR-----------RIDFAGLTS 149 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEEC-----------TTTTTTCCE
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccC-----------Hhhhhcccc
Confidence 999998888775 88899999999999999864 56778899999999999998443332 223344678
Q ss_pred ccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCC--c-ccccCCCCCCEE
Q 046275 303 LVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGAL--P-DSLSNLTNLETL 379 (1176)
Q Consensus 303 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~--p-~~l~~l~~L~~L 379 (1176)
|++|++++|++++..|..+..+++|++|++++|.+. .+|...+..+++|++|++++|.+++.. | .....+++|+.|
T Consensus 150 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L 228 (549)
T 2z81_A 150 LNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKL 228 (549)
T ss_dssp EEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEE
T ss_pred cCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccce
Confidence 999999999999889999999999999999999986 778777788999999999999998742 2 223467899999
Q ss_pred EccCCcCCCCCCccccC--CCCCCccEEEccCccccCCC------CccccccccCcEEEcCCccccCC-----CCccccC
Q 046275 380 DLSSNNLSGAIPHNLCQ--GPRNSLKELFLQNNLLLGSI------PSTLSNCSQLVSLHLSFNYLTGT-----IPSSLGS 446 (1176)
Q Consensus 380 ~Ls~N~l~~~~p~~~~~--~~~~~L~~L~L~~N~l~~~~------p~~l~~l~~L~~L~Ls~N~l~~~-----~p~~~~~ 446 (1176)
++++|.+++..+..+.. ..+.+|+.|++++|.+.+.. ...+..+.+|+.|++.++.+... ++..+..
T Consensus 229 ~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~ 308 (549)
T 2z81_A 229 AFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSL 308 (549)
T ss_dssp EEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHH
T ss_pred eccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhh
Confidence 99999988655544321 23568999999999987632 23456788999999999887632 2223344
Q ss_pred CCccCeeecccccccCCCCCCC-CCccccceeecccccccCccc---cccccCCCCCeeeccccccCCCCC--ccccCCC
Q 046275 447 LSKLQDLKLWLNQLHGEIPPEL-GNIQTLETLFLDFNELTGTLP---AALSNCTNLNWISLSNNHLGGEIP--TWIGQLS 520 (1176)
Q Consensus 447 l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~ 520 (1176)
..+|+.|++++|.+. .+|..+ ..+++|++|+|++|++++.+| ..++.+++|++|+|++|++++..+ ..+..++
T Consensus 309 ~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~ 387 (549)
T 2z81_A 309 LEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLK 387 (549)
T ss_dssp STTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCT
T ss_pred cccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCC
Confidence 578999999999998 777766 579999999999999998775 347899999999999999986432 5689999
Q ss_pred CCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchh
Q 046275 521 NLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLE 600 (1176)
Q Consensus 521 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (1176)
+|++|+|++|+++ .+|..+..+++|++|++++|++++ +|..+
T Consensus 388 ~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~------------------------------------ 429 (549)
T 2z81_A 388 NLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI------------------------------------ 429 (549)
T ss_dssp TCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS------------------------------------
T ss_pred CCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh------------------------------------
Confidence 9999999999998 799999999999999999999872 33211
Q ss_pred hhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccceeeeccCccccccCCccc
Q 046275 601 FAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEV 680 (1176)
Q Consensus 601 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~ 680 (1176)
..+|++|||++|+|++.+ +.+++|+.|+|++|+|+ .||+ .
T Consensus 430 ----------------------------------~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~ 469 (549)
T 2z81_A 430 ----------------------------------PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-A 469 (549)
T ss_dssp ----------------------------------CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-G
T ss_pred ----------------------------------cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-c
Confidence 025889999999999753 58899999999999999 8997 5
Q ss_pred cCcCcccEEEccCccccccCCCCccccccccccccccccccCCCCCCC
Q 046275 681 GDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLTGMIPVMG 728 (1176)
Q Consensus 681 ~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~g~~p~~~ 728 (1176)
+.+++|++|||++|+|++.+|..+..+++|+.|+|++|++++..|...
T Consensus 470 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 517 (549)
T 2z81_A 470 SLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 517 (549)
T ss_dssp GGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHHH
T ss_pred ccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccHH
Confidence 789999999999999999888889999999999999999999988543
No 19
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6.3e-49 Score=438.12 Aligned_cols=262 Identities=29% Similarity=0.434 Sum_probs=202.4
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccC--CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHIS--GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
++|.+.+.||+|+||+||+|+++ ..||||++.... ....+.|.+|+.++++++|||||+++|++.+ +..|+||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 46778899999999999999875 469999885432 2334679999999999999999999998864 568999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD 1017 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 1017 (1176)
|++|+|.++++..+ .+++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+......
T Consensus 113 ~~gGsL~~~l~~~~---~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 113 CEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred CCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 99999999998653 2699999999999999999999999 99999999999999999999999999998765544
Q ss_pred ccccccccccCCcccCccccCC---CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1018 THLSVSTLAGTPGYVPPEYYQS---FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1018 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
........+||+.|||||++.+ ..|+.++|||||||++|||+||+.||...+. ................ .+.
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~----~~~~~~~~~~~~~~p~-~~~ 261 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN----RDQIIFMVGRGYASPD-LSK 261 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC----HHHHHHHHHTTCCCCC-STT
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh----HHHHHHHHhcCCCCCC-ccc
Confidence 4334456789999999999853 4689999999999999999999999975431 1111122211111100 011
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
.....|. .+.+++.+||+.||++|||+.||+++|+.++...
T Consensus 262 ~~~~~~~------~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 262 LYKNCPK------AMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp SCTTSCH------HHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred ccccchH------HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 1222221 3556999999999999999999999999987554
No 20
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=8.5e-49 Score=435.48 Aligned_cols=261 Identities=21% Similarity=0.299 Sum_probs=217.2
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|++.+.||+|+||+||+|+++ +|+.||||++.+. .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46999999999999999999986 6999999999643 2344567999999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||++||+|.+++...+ .+++.+++.++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~~~----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 9999999999998765 699999999999999999999999 999999999999999999999999999998765
Q ss_pred ccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCccc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPEL 1095 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1095 (1176)
..........+||+.|||||++.+..|+.++||||+||++|||+||+.||...+ .......+...... +++.
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----~~~~~~~i~~~~~~--~p~~- 256 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-----EGLIFAKIIKLEYD--FPEK- 256 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCC--CCTT-
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCCCC--CCcc-
Confidence 444444467789999999999999999999999999999999999999996543 22333333333221 1111
Q ss_pred ccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHHHhhCCCCC
Q 046275 1096 MKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM--FKEIQAGSGLD 1144 (1176)
Q Consensus 1096 ~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~--L~~i~~~~~~~ 1144 (1176)
.+ .++.+++.+||+.||++|||++|++.+ +.++....+.+
T Consensus 257 ---~s------~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~id 298 (311)
T 4aw0_A 257 ---FF------PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT 298 (311)
T ss_dssp ---CC------HHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred ---cC------HHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCC
Confidence 11 135679999999999999999998544 55555554443
No 21
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3e-48 Score=437.70 Aligned_cols=250 Identities=24% Similarity=0.353 Sum_probs=209.6
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeec
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYM 938 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 938 (1176)
+.|++.+.||+|+||+||+|+++ +|+.||||++........+.+.+|++++++++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46889999999999999999987 69999999997666666677899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccccc
Q 046275 939 RYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDT 1018 (1176)
Q Consensus 939 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 1018 (1176)
+||+|.+++... .+++.+++.++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+.....
T Consensus 154 ~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 154 EGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp TTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred CCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence 999999999753 589999999999999999999999 999999999999999999999999999987654322
Q ss_pred cccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcccccC
Q 046275 1019 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKE 1098 (1176)
Q Consensus 1019 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1176)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||...+ ..+....+........ ..+..
T Consensus 226 --~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----~~~~~~~i~~~~~~~~---~~~~~ 295 (346)
T 4fih_A 226 --RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-----PLKAMKMIRDNLPPRL---KNLHK 295 (346)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSSCCCC---SCGGG
T ss_pred --cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHHHcCCCCCC---Ccccc
Confidence 2356789999999999999999999999999999999999999996532 2222222222111110 01111
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1099 DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1099 ~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.+ ..+.+|+.+||+.||++|||++|+++|
T Consensus 296 ~s------~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 296 VS------PSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp SC------HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CC------HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11 135679999999999999999999886
No 22
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.7e-47 Score=471.77 Aligned_cols=466 Identities=23% Similarity=0.233 Sum_probs=352.8
Q ss_pred cCccccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCc
Q 046275 119 SFLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDEL 198 (1176)
Q Consensus 119 ~~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L 198 (1176)
++|++|||++|.+++..+ ..+..+++|++|+|++|+|+.++...+..+++|++|||++|++++ ++...|.++++|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~---~~~~~~~~l~~L 100 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGH--GDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSS---LSSSWFGPLSSL 100 (549)
T ss_dssp TTCCEEECCSSCCCEECS--STTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCS---CCHHHHTTCTTC
T ss_pred CCccEEECcCCccCccCh--hhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCc---cCHHHhccCCCC
Confidence 456666666666654433 236677777777777777777777777777778888888887775 555557777888
Q ss_pred cEEEeCCCcccc---cccCCCCCccceeeccCCc-ccccCC-CccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeec
Q 046275 199 KQLALKGNKVTG---DINVSKCKNLQFLDVSSNN-FSMAVP-SFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVS 273 (1176)
Q Consensus 199 ~~L~L~~n~l~~---~~~~~~l~~L~~L~Ls~N~-l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls 273 (1176)
++|++++|.++. ...+..+++|++|++++|+ ++.+++ .+.++++|++|++++|++++..|..+..+++|++|+++
T Consensus 101 ~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 180 (549)
T 2z81_A 101 KYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLH 180 (549)
T ss_dssp CEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEE
T ss_pred cEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecc
Confidence 888888887764 2357788889999999888 555553 58889999999999999998888889999999999999
Q ss_pred cccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccC--C-ccccCCCCCcEEEccCCcCcccCCHHH---Hh
Q 046275 274 SNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKV--P-SRFGSCSSLESFDISSNKFSGELPIEI---FL 347 (1176)
Q Consensus 274 ~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~--p-~~~~~l~~L~~L~Ls~N~l~~~i~~~~---~~ 347 (1176)
.|.+. .++...+..+++|++|++++|++++.. | .....+++|+.|++++|.+++..+..+ +.
T Consensus 181 ~n~~~------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~ 248 (549)
T 2z81_A 181 LSESA------------FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLR 248 (549)
T ss_dssp CSBST------------THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGG
T ss_pred cCccc------------ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhh
Confidence 88875 445555566788999999999988642 1 234557889999999998876544433 24
Q ss_pred cCCCCCEEEccCcccCCCC------cccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCcccc
Q 046275 348 SMSNLKELVLSFNDFTGAL------PDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLS 421 (1176)
Q Consensus 348 ~l~~L~~L~Ls~N~l~~~~------p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~ 421 (1176)
.+++|+.|++++|.+.+.. ...+..+.+|+.|++.++.+... ... ..++..+.
T Consensus 249 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~----~~~-----------------~~l~~~~~ 307 (549)
T 2z81_A 249 YILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQF----YLF-----------------YDLSTVYS 307 (549)
T ss_dssp GCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCG----GGS-----------------CCCCHHHH
T ss_pred hhccccccccccccccccccccccchhhhhhhcccccccccccccchh----hhc-----------------ccchhhhh
Confidence 5778888888888876531 12345556666666666654311 000 01222233
Q ss_pred ccccCcEEEcCCccccCCCCccc-cCCCccCeeecccccccCCCC---CCCCCccccceeecccccccCccc--cccccC
Q 046275 422 NCSQLVSLHLSFNYLTGTIPSSL-GSLSKLQDLKLWLNQLHGEIP---PELGNIQTLETLFLDFNELTGTLP--AALSNC 495 (1176)
Q Consensus 422 ~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l 495 (1176)
...+|+.|++++|+++ .+|..+ ..+++|++|++++|++.+.+| ..++.+++|++|+|++|++++..+ ..+..+
T Consensus 308 ~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l 386 (549)
T 2z81_A 308 LLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTL 386 (549)
T ss_dssp HSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGC
T ss_pred hcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcC
Confidence 4567888888888877 666665 468888888888888887663 347788899999999999986543 568899
Q ss_pred CCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhh
Q 046275 496 TNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANF 575 (1176)
Q Consensus 496 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~ 575 (1176)
++|++|++++|+++ .+|..++.+++|++|+|++|+++ .+|..+. ++|+.|+|++|++++.+
T Consensus 387 ~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~--------------- 447 (549)
T 2z81_A 387 KNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS--------------- 447 (549)
T ss_dssp TTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC---------------
T ss_pred CCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc---------------
Confidence 99999999999998 68888999999999999999997 5665553 68999999999987521
Q ss_pred ccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCcc
Q 046275 576 IVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKE 655 (1176)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~ 655 (1176)
..+.+|++|||++|+|+ .||.
T Consensus 448 ---------------------------------------------------------~~l~~L~~L~Ls~N~l~-~ip~- 468 (549)
T 2z81_A 448 ---------------------------------------------------------LFLPRLQELYISRNKLK-TLPD- 468 (549)
T ss_dssp ---------------------------------------------------------CCCTTCCEEECCSSCCS-SCCC-
T ss_pred ---------------------------------------------------------ccCChhcEEECCCCccC-cCCC-
Confidence 11246889999999999 7887
Q ss_pred ccccccceeeeccCccccccCCccccCcCcccEEEccCccccccCC
Q 046275 656 IGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIP 701 (1176)
Q Consensus 656 ~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP 701 (1176)
.+.+++|+.|+|++|++++.+|..++.+++|+.|+|++|++++..|
T Consensus 469 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 469 ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 5789999999999999999888899999999999999999998766
No 23
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=3.1e-48 Score=436.38 Aligned_cols=257 Identities=23% Similarity=0.266 Sum_probs=207.1
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeec
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYM 938 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 938 (1176)
+.|++.++||+|+||+||+|+++ +|+.||||++.... ...+|+.++++++|||||++++++.+++..|+|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 46788889999999999999986 69999999986432 2247999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCC-cEEEEeecccccccccc
Q 046275 939 RYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENF-EARVSDFGMARLMSAMD 1017 (1176)
Q Consensus 939 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~~~~~~~ 1017 (1176)
+||+|.++++..+ ++++..++.++.||+.||+|||++ +||||||||+|||++.++ .+||+|||+|+......
T Consensus 133 ~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 133 EGGSLGQLIKQMG----CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp TTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred CCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 9999999998765 699999999999999999999999 999999999999999987 69999999998765432
Q ss_pred ccc---cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1018 THL---SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1018 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||....... -+... ...... ...
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~i----~~~~~~---~~~ 277 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLKI----ASEPPP---IRE 277 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHHH----HHSCCG---GGG
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHH----HcCCCC---chh
Confidence 211 2234679999999999999999999999999999999999999997654322 11111 111110 011
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCC
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSG 1142 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~ 1142 (1176)
++...+ ..+.+++.+||+.||++|||+.|+++++.......+
T Consensus 278 ~~~~~s------~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 278 IPPSCA------PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp SCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred cCccCC------HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 111111 134569999999999999999999999988765543
No 24
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2e-48 Score=439.94 Aligned_cols=251 Identities=23% Similarity=0.347 Sum_probs=203.8
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
++|++.+.||+|+||+||+|+++ +|+.||||++..... ...+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57999999999999999999986 699999999865322 234568999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAM 1016 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 1016 (1176)
||+||+|.+++...+ +..+++.+++.++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 999999999997654 23679999999999999999999999 9999999999999999999999999999876432
Q ss_pred cccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcccc
Q 046275 1017 DTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELM 1096 (1176)
Q Consensus 1017 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1176)
.. .....+||+.|||||++.+..|+.++||||+||++|||+||+.||...+ ..+....+...... ...
T Consensus 179 ~~--~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~i~~~~~~-----~~~ 246 (350)
T 4b9d_A 179 VE--LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----MKNLVLKIISGSFP-----PVS 246 (350)
T ss_dssp HH--HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHTCCC-----CCC
T ss_pred cc--cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHHHcCCCC-----CCC
Confidence 21 2245679999999999999999999999999999999999999996543 33333333333321 111
Q ss_pred cCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1097 KEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1097 ~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+ ..+.+|+.+||+.||++|||++|++++
T Consensus 247 ~~~s------~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 247 LHYS------YDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp TTSC------HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccCC------HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1112 135679999999999999999999885
No 25
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-47 Score=424.24 Aligned_cols=247 Identities=25% Similarity=0.385 Sum_probs=197.9
Q ss_pred CCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC--CcCHHHHHHHHHHHHhcCCCCcccceeEEee----CCeeEEEE
Q 046275 863 HNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS--GQGDREFTAEMETIGKIKHRNLVPLLGYCKV----GEERLLVY 935 (1176)
Q Consensus 863 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~ 935 (1176)
.+.+.||+|+||+||+|++. +++.||+|++.... ....+.|.+|++++++++|||||+++++|.+ +...|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 56678999999999999986 58999999986532 2234568999999999999999999999865 34579999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC-CCcEEEEeeccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE-NFEARVSDFGMARLMS 1014 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~~~ 1014 (1176)
|||++|+|.+++++.+ ++++..++.++.||+.||+|||+++ ++||||||||+|||++. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999998764 6899999999999999999999981 13999999999999984 7899999999998643
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
.. .....+||+.|||||++.+ +|+.++|||||||++|||+||+.||.... +.............+ +.
T Consensus 184 ~~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~----~~~~~~~~i~~~~~~----~~ 250 (290)
T 3fpq_A 184 AS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGVKP----AS 250 (290)
T ss_dssp TT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTCCC----GG
T ss_pred CC----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC----cHHHHHHHHHcCCCC----CC
Confidence 22 2345689999999999875 69999999999999999999999996432 222333333222211 11
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.....+ .++.+++.+||+.||++|||++|+++|
T Consensus 251 ~~~~~~------~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 251 FDKVAI------PEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GGGCCC------HHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCccCC------HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111111 135679999999999999999999875
No 26
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.8e-47 Score=439.27 Aligned_cols=250 Identities=24% Similarity=0.353 Sum_probs=210.0
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeec
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYM 938 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 938 (1176)
+.|++.+.||+|+||+||+|+++ +|+.||||++........+.+.+|+.+|+.++|||||+++++|.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999987 69999999997666666677999999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccccc
Q 046275 939 RYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDT 1018 (1176)
Q Consensus 939 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 1018 (1176)
+||+|.++++.. .+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+.....
T Consensus 231 ~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~ 302 (423)
T 4fie_A 231 EGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 302 (423)
T ss_dssp TTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred CCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence 999999999754 589999999999999999999999 999999999999999999999999999987654322
Q ss_pred cccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcccccC
Q 046275 1019 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKE 1098 (1176)
Q Consensus 1019 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1176)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||...+ .......+........ ..+..
T Consensus 303 --~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----~~~~~~~i~~~~~~~~---~~~~~ 372 (423)
T 4fie_A 303 --RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-----PLKAMKMIRDNLPPRL---KNLHK 372 (423)
T ss_dssp --CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCC---SCTTS
T ss_pred --cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHHHcCCCCCC---ccccc
Confidence 2356789999999999999999999999999999999999999996532 2222222222111110 01111
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1099 DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1099 ~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.+ ..+.+|+.+||+.||++|||++|+++|
T Consensus 373 ~s------~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 373 VS------PSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp SC------HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CC------HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11 135679999999999999999999886
No 27
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4e-47 Score=416.65 Aligned_cols=246 Identities=24% Similarity=0.371 Sum_probs=192.7
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC---CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS---GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|++.+.||+|+||+||+|+++ +|+.||+|++.+.. ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 58999999999999999999976 69999999986432 233457899999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+ +|+|.+++...+ ++++.+++.++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~~~----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHHSC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 679999998664 699999999999999999999999 999999999999999999999999999986543
Q ss_pred ccccccccccccCCcccCccccCCCCC-CchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRC-STKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
.. .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||...+ .......+...... ++
T Consensus 165 ~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-----~~~~~~~i~~~~~~--~p-- 232 (275)
T 3hyh_A 165 GN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNISNGVYT--LP-- 232 (275)
T ss_dssp -------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCC--CC--
T ss_pred CC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCCCC--CC--
Confidence 22 2345689999999999998876 579999999999999999999996532 33333333332211 11
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+ ..+.+++.+||+.||++|||++|+++|
T Consensus 233 --~~~s------~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 233 --KFLS------PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp --TTSC------HHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred --CCCC------HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1111 134569999999999999999999986
No 28
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.1e-47 Score=438.00 Aligned_cols=268 Identities=22% Similarity=0.356 Sum_probs=214.8
Q ss_pred HHHhcCCCCCceEeEeCceEEEEEEECC------CCEEEEEEeeccCCc-CHHHHHHHHHHHHhcCC-CCcccceeEEee
Q 046275 856 LEATNGFHNDSLIGSGGFGDVYKAKLKD------GSTVAIKKLIHISGQ-GDREFTAEMETIGKIKH-RNLVPLLGYCKV 927 (1176)
Q Consensus 856 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h-~niv~l~~~~~~ 927 (1176)
+...++|++.+.||+|+||+||+|++.. ++.||||++...... ..+.|.+|++++.+++| ||||+++|+|.+
T Consensus 60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 3445789999999999999999998752 357999998654332 34568999999999965 899999999866
Q ss_pred C-CeeEEEEeeccCCCHHHHHhhcccc------------CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCE
Q 046275 928 G-EERLLVYEYMRYGSLEDVLHNQKKV------------GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNV 994 (1176)
Q Consensus 928 ~-~~~~lV~E~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NI 994 (1176)
. ...|+|||||++|+|.++++..+.. ...+++.+++.++.|||+||+|||++ +||||||||+||
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NI 216 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNI 216 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccce
Confidence 4 5689999999999999999865321 23589999999999999999999999 999999999999
Q ss_pred EECCCCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCc
Q 046275 995 LLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDN 1073 (1176)
Q Consensus 995 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~ 1073 (1176)
|+++++.+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||...... .
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~-~ 295 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-E 295 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-H
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-H
Confidence 999999999999999987755444444456789999999999999999999999999999999998 99999764322 1
Q ss_pred cHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1074 NLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1074 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
.+..... .+. .+......+. ++.+++.+||+.||++|||+.||+++|+++.+..
T Consensus 296 ~~~~~i~---~g~-----~~~~p~~~~~------~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 296 EFCRRLK---EGT-----RMRAPDYTTP------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp HHHHHHH---HTC-----CCCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHH---cCC-----CCCCCccCCH------HHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 1222221 111 1111111221 3456999999999999999999999999987654
No 29
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.6e-47 Score=466.67 Aligned_cols=454 Identities=20% Similarity=0.199 Sum_probs=265.1
Q ss_pred EEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCccccc--ccCCCCCccceeecc
Q 046275 149 VLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGD--INVSKCKNLQFLDVS 226 (1176)
Q Consensus 149 ~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~Ls 226 (1176)
+|++++|+|+.++.... ++|++|||++|+|++ ++...|.++++|++|+|++|++++. ..+..+++|++|+|+
T Consensus 4 ~l~ls~n~l~~ip~~~~---~~L~~L~Ls~n~i~~---~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 77 (520)
T 2z7x_B 4 LVDRSKNGLIHVPKDLS---QKTTILNISQNYISE---LWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLS 77 (520)
T ss_dssp EEECTTSCCSSCCCSCC---TTCSEEECCSSCCCC---CCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECC
T ss_pred eEecCCCCccccccccc---ccccEEECCCCcccc---cChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecC
Confidence 45555555555554333 455666666666554 3334455666666666666666543 346677777777777
Q ss_pred CCcccccCCCccCCCCCcEEEcCCCcCCCC-cChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCc--
Q 046275 227 SNNFSMAVPSFGDCLALEYLDISANKFTGD-VGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSL-- 303 (1176)
Q Consensus 227 ~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~-~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L-- 303 (1176)
+|+++.++.. .+++|++|+|++|++++. .|..++++++|++|++++|.+++. .+..+++|
T Consensus 78 ~N~l~~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~---------------~~~~l~~L~L 140 (520)
T 2z7x_B 78 HNKLVKISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS---------------SVLPIAHLNI 140 (520)
T ss_dssp SSCCCEEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG---------------GGGGGTTSCE
T ss_pred CCceeecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchh---------------hcccccccee
Confidence 7777766555 677888888888887763 567788888888888888877631 11223455
Q ss_pred cEEEccCCcc--cccCCccccCCC-CCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcc-------cCCCCcccccCC
Q 046275 304 VKLDLSSNNL--SGKVPSRFGSCS-SLESFDISSNKFSGELPIEIFLSMSNLKELVLSFND-------FTGALPDSLSNL 373 (1176)
Q Consensus 304 ~~L~L~~n~l--~~~~p~~~~~l~-~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~-------l~~~~p~~l~~l 373 (1176)
++|++++|.+ .+..|..+..+. +...+++++|.+.+.++...+..+++|+.|++++|. +.+.+| .+..+
T Consensus 141 ~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l 219 (520)
T 2z7x_B 141 SKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTN 219 (520)
T ss_dssp EEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGC
T ss_pred eEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccc
Confidence 8888888877 666777776665 344567777777777776667777888888888776 554444 67777
Q ss_pred CCCCEEEccCCcCCCCCCccccCC-CCCCccEEEccCccccCCCCccc-----cccccCcEEEcCCccccCCCC-ccccC
Q 046275 374 TNLETLDLSSNNLSGAIPHNLCQG-PRNSLKELFLQNNLLLGSIPSTL-----SNCSQLVSLHLSFNYLTGTIP-SSLGS 446 (1176)
Q Consensus 374 ~~L~~L~Ls~N~l~~~~p~~~~~~-~~~~L~~L~L~~N~l~~~~p~~l-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~ 446 (1176)
++|+.|++++|.+++..+..+... ..++|++|++++|.++|.+|..+ +++++|+.+++++|.+ .+| ..+..
T Consensus 220 ~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~ 297 (520)
T 2z7x_B 220 PKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYE 297 (520)
T ss_dssp TTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHH
T ss_pred cchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhc
Confidence 778888887777664332221100 01245555555555555555554 5555555555555555 233 23332
Q ss_pred C---CccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCC
Q 046275 447 L---SKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLA 523 (1176)
Q Consensus 447 l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 523 (1176)
+ .+|+.|++++|. +.+.. .+..+++|++|++++|++++.+|.+++.+++|+
T Consensus 298 ~~~~~~L~~L~l~~n~------------------------l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 351 (520)
T 2z7x_B 298 IFSNMNIKNFTVSGTR------------------------MVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELE 351 (520)
T ss_dssp HHHTCCCSEEEEESSC------------------------CCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCC
T ss_pred ccccCceeEEEcCCCc------------------------ccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCC
Confidence 2 344444444444 43211 113444555555555555544555555555555
Q ss_pred eEEccCCcccc--cCCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhh
Q 046275 524 ILKLSNNSFYG--RIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEF 601 (1176)
Q Consensus 524 ~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (1176)
+|+|++|++++ .+|..++.+++|+.|+|++|++++.+|...
T Consensus 352 ~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~------------------------------------- 394 (520)
T 2z7x_B 352 TLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGD------------------------------------- 394 (520)
T ss_dssp EEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCS-------------------------------------
T ss_pred EEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccch-------------------------------------
Confidence 55555555553 334445555555555555555554333211
Q ss_pred hhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccceeeeccCccccccCCcccc
Q 046275 602 AGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVG 681 (1176)
Q Consensus 602 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~ 681 (1176)
+..+.+|++|+|++|++++.+|..+. ++|+.|+|++|+++ .+|..+.
T Consensus 395 ------------------------------~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~ 441 (520)
T 2z7x_B 395 ------------------------------CSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV 441 (520)
T ss_dssp ------------------------------CCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG
T ss_pred ------------------------------hccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh
Confidence 11123455556666666555555543 55666666666666 6666666
Q ss_pred CcCcccEEEccCccccccCCCC-ccccccccccccccccccCCCC
Q 046275 682 DLRGLNILDLSSNRLEGTIPSS-MSSLTLLNEIDLCNNQLTGMIP 725 (1176)
Q Consensus 682 ~L~~L~~L~Ls~N~l~g~iP~~-l~~l~~L~~l~ls~N~l~g~~p 725 (1176)
.+++|++|+|++|+|+ .+|.. +..+++|+.|+|++|++++..+
T Consensus 442 ~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 442 KLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp GCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 6666666666666666 45554 6666666677777776666554
No 30
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.9e-47 Score=472.48 Aligned_cols=452 Identities=19% Similarity=0.287 Sum_probs=283.2
Q ss_pred ccceeeccCCccccc-CCCccCCCCCcEEEcCCCcC------CC------CcChhhhccccCCeEeeccccccCccCCCC
Q 046275 219 NLQFLDVSSNNFSMA-VPSFGDCLALEYLDISANKF------TG------DVGHAISACEHLSFLNVSSNLFSGPIPVGY 285 (1176)
Q Consensus 219 ~L~~L~Ls~N~l~~~-~~~l~~l~~L~~L~Ls~N~l------~~------~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 285 (1176)
+++.|+|++|+++|. ++.++++++|++|+|++|.+ .+ .+|... +.+|+ ++++.|.+.+.+|..+
T Consensus 82 ~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~ 158 (636)
T 4eco_A 82 RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDF 158 (636)
T ss_dssp CEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGS
T ss_pred CEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhH
Confidence 455566666666543 33466666666666666644 11 223222 44555 6666666665555443
Q ss_pred ccccCcchh-hh------hhcCCCccEEEcc--CCcccccCCccccCCCCCcEEEccCCcCccc----------------
Q 046275 286 NEFQGEIPL-HL------ADLCSSLVKLDLS--SNNLSGKVPSRFGSCSSLESFDISSNKFSGE---------------- 340 (1176)
Q Consensus 286 ~~l~~~i~~-~~------~~~l~~L~~L~L~--~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---------------- 340 (1176)
..+...... .. ......++.+.+. .|++++ +|..|+++++|++|+|++|.++|.
T Consensus 159 ~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~ 237 (636)
T 4eco_A 159 SDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQ 237 (636)
T ss_dssp CHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHH
T ss_pred HHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcc
Confidence 311000000 00 0000122222222 567776 777777777788888887777764
Q ss_pred -CCHHHHh--cCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCc-CCC-CCCccccCC----CCCCccEEEccCcc
Q 046275 341 -LPIEIFL--SMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNN-LSG-AIPHNLCQG----PRNSLKELFLQNNL 411 (1176)
Q Consensus 341 -i~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~~----~~~~L~~L~L~~N~ 411 (1176)
+|..+ . ++++|++|+|++|.+.+.+|..++++++|++|+|++|+ ++| .+|..+... .+++|++|+|++|+
T Consensus 238 ~ip~~l-~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~ 316 (636)
T 4eco_A 238 YKTEDL-KWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNN 316 (636)
T ss_dssp HTTSCC-CGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSC
T ss_pred cCchhh-hhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCc
Confidence 66653 4 67778888888777777777777777778888888777 776 677665321 12567778888887
Q ss_pred ccCCCCc--cccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccc-cceeecccccccCcc
Q 046275 412 LLGSIPS--TLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQT-LETLFLDFNELTGTL 488 (1176)
Q Consensus 412 l~~~~p~--~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~ 488 (1176)
++ .+|. .++++++|++|++++|+++|.+| .++.+++|++|++++|+++ .+|..++.+++ |++|+|++|+++ .+
T Consensus 317 l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~l 392 (636)
T 4eco_A 317 LK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YI 392 (636)
T ss_dssp CS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SC
T ss_pred CC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-cc
Confidence 77 6777 77777778888888887777777 7777777888888877777 77777777777 888888888777 66
Q ss_pred ccccccCC--CCCeeeccccccCCCCCcccc-------CCCCCCeEEccCCcccccCCCC-CCCCCCCCEEEccCCCCcc
Q 046275 489 PAALSNCT--NLNWISLSNNHLGGEIPTWIG-------QLSNLAILKLSNNSFYGRIPPE-LGDCRSLIWLDLNTNLFNG 558 (1176)
Q Consensus 489 p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~g 558 (1176)
|..+..++ +|++|++++|++++.+|..|. .+++|++|+|++|+++ .+|.. +..+++|+.|+|++|+++
T Consensus 393 p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~- 470 (636)
T 4eco_A 393 PNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT- 470 (636)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-
T ss_pred chhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-
Confidence 77666654 777788888887777777777 6777778888888777 45554 345777778888887777
Q ss_pred cCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCc
Q 046275 559 SIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSM 638 (1176)
Q Consensus 559 ~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 638 (1176)
.+|...|.... +.+..+.+|
T Consensus 471 ~i~~~~~~~~~------------------------------------------------------------~~~~~l~~L 490 (636)
T 4eco_A 471 EIPKNSLKDEN------------------------------------------------------------ENFKNTYLL 490 (636)
T ss_dssp BCCSSSSEETT------------------------------------------------------------EECTTGGGC
T ss_pred CcCHHHhcccc------------------------------------------------------------ccccccCCc
Confidence 67765443110 001112245
Q ss_pred cEEEcccCcCccCCCcccc--ccccceeeeccCccccccCCccccCcCcccEEEc------cCccccccCCCCccccccc
Q 046275 639 MFLDISYNMLSGSIPKEIG--SMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDL------SSNRLEGTIPSSMSSLTLL 710 (1176)
Q Consensus 639 ~~LdLs~N~l~g~iP~~~~--~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~L------s~N~l~g~iP~~l~~l~~L 710 (1176)
++|||++|+++ .+|..++ .+++|+.|+|++|++++ +|..++++++|++|+| ++|++.+.+|..+..+++|
T Consensus 491 ~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L 568 (636)
T 4eco_A 491 TSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSL 568 (636)
T ss_dssp CEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSC
T ss_pred cEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCC
Confidence 66666666666 5666665 66666666666666664 6666666666666666 3455666666666666666
Q ss_pred cccccccccccCCCCCCCCccccCCccccCCCCCC
Q 046275 711 NEIDLCNNQLTGMIPVMGQFETFQPAKFLNNSGLC 745 (1176)
Q Consensus 711 ~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~ 745 (1176)
+.|+|++|++ +.+|..- ...+....+.+|+-.|
T Consensus 569 ~~L~Ls~N~l-~~ip~~~-~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 569 TQLQIGSNDI-RKVNEKI-TPNISVLDIKDNPNIS 601 (636)
T ss_dssp CEEECCSSCC-CBCCSCC-CTTCCEEECCSCTTCE
T ss_pred CEEECCCCcC-CccCHhH-hCcCCEEECcCCCCcc
Confidence 6666666666 4555431 1344444445554443
No 31
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.3e-46 Score=423.25 Aligned_cols=268 Identities=24% Similarity=0.351 Sum_probs=202.2
Q ss_pred CCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHH--HHHHHHHHhcCCCCcccceeEEeeCC----eeEEE
Q 046275 861 GFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREF--TAEMETIGKIKHRNLVPLLGYCKVGE----ERLLV 934 (1176)
Q Consensus 861 ~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~--~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lV 934 (1176)
+|.+.+.||+|+||+||+|+++ |+.||||++... ..+.+ ..|+..+.+++|||||++++++.++. ..|+|
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 5777899999999999999985 899999998542 23333 34566667889999999999997653 57999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcC-----CCCeeeCCCCCCCEEECCCCcEEEEeecc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNC-----IPHIIHRDMKSSNVLLDENFEARVSDFGM 1009 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 1009 (1176)
|||+++|+|.++++.. +++|..+.+++.|+++||+|||+++ .++||||||||+|||++.++.+||+|||+
T Consensus 80 ~Ey~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl 154 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ecCCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence 9999999999999864 5899999999999999999999862 45899999999999999999999999999
Q ss_pred ccccccccccc--cccccccCCcccCccccCCC------CCCchhhhHHHHHHHHHHHcCCCCCCCCCCC----------
Q 046275 1010 ARLMSAMDTHL--SVSTLAGTPGYVPPEYYQSF------RCSTKGDVYSYGVVLLELLTGKRPTDSADFG---------- 1071 (1176)
Q Consensus 1010 a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg~~P~~~~~~~---------- 1071 (1176)
|+......... .....+||+.|||||++.+. .++.++|||||||++|||+||+.||......
T Consensus 155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~ 234 (303)
T 3hmm_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp CEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred CccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccc
Confidence 98765433221 22346799999999998754 4678999999999999999998876543211
Q ss_pred CccHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCC
Q 046275 1072 DNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSG 1142 (1176)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~ 1142 (1176)
......+...... +.++|.+....+. ......+.+++.+||+.||++||||.||++.|+++.+..+
T Consensus 235 ~~~~~~~~~~~~~----~~~rp~~p~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~ 300 (303)
T 3hmm_A 235 DPSVEEMRKVVCE----QKLRPNIPNRWQS-CEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp SCCHHHHHHHHTT----SCCCCCCCGGGGS-SHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred cchHHHHHHHHhc----ccCCCCCCccccc-hHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcC
Confidence 1122222222222 2233333222111 1123456679999999999999999999999999986543
No 32
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.8e-47 Score=421.77 Aligned_cols=242 Identities=23% Similarity=0.301 Sum_probs=193.9
Q ss_pred cCCCCCceEeEeCceEEEEEEEC----CCCEEEEEEeeccC--CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK----DGSTVAIKKLIHIS--GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLL 933 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 933 (1176)
++|++.+.||+|+||+||+|+.. +++.||+|++.+.. ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46999999999999999999873 47899999986432 2233468889999999999999999999999999999
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
||||++||+|.+++.+.+ .+++.+++.++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999998765 699999999999999999999999 9999999999999999999999999999865
Q ss_pred ccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCc
Q 046275 1014 SAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDP 1093 (1176)
Q Consensus 1014 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1093 (1176)
..... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||...+ ..+....+...... +
T Consensus 177 ~~~~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~i~~~~~~--~-- 245 (304)
T 3ubd_A 177 IDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD-----RKETMTMILKAKLG--M-- 245 (304)
T ss_dssp ----C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC--C--
T ss_pred cCCCc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC-----HHHHHHHHHcCCCC--C--
Confidence 43222 2345789999999999999999999999999999999999999997543 22333333332211 1
Q ss_pred ccccCCCchHHHHHHHHHHHHHhccCCCCCCCCH
Q 046275 1094 ELMKEDPNIEIELLQHLHVASACLDDRPWRRPTM 1127 (1176)
Q Consensus 1094 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~ 1127 (1176)
+...+ ..+.+++.+||+.||++|||+
T Consensus 246 --p~~~s------~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 246 --PQFLS------PEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp --CTTSC------HHHHHHHHHHTCSSGGGSTTC
T ss_pred --CCcCC------HHHHHHHHHHcccCHHHCCCC
Confidence 11111 135569999999999999985
No 33
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.7e-44 Score=450.24 Aligned_cols=509 Identities=22% Similarity=0.182 Sum_probs=340.5
Q ss_pred cCccccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCc
Q 046275 119 SFLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDEL 198 (1176)
Q Consensus 119 ~~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L 198 (1176)
+++++||||+|.|++.++ ..+.++++|++|+|++|+|+.++..+|..+++|++|+|++|+|+. ++..+|.++++|
T Consensus 52 ~~~~~LdLs~N~i~~l~~--~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~---l~~~~f~~L~~L 126 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGS--YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS---LALGAFSGLSSL 126 (635)
T ss_dssp TTCCEEECTTSCCCEECT--TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE---ECGGGGTTCTTC
T ss_pred cCCCEEEeeCCCCCCCCH--HHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCC---CCHHHhcCCCCC
Confidence 467777888877775543 246778888888888888888888888888888888888888875 666777778888
Q ss_pred cEEEeCCCcccccc--cCCCCCccceeeccCCccccc--CCCccCCCCCcEEEcCCCcCCCCcChhhhccccCC----eE
Q 046275 199 KQLALKGNKVTGDI--NVSKCKNLQFLDVSSNNFSMA--VPSFGDCLALEYLDISANKFTGDVGHAISACEHLS----FL 270 (1176)
Q Consensus 199 ~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~l~~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~----~L 270 (1176)
++|+|++|+++... .++.+++|++|+|++|.++.+ +..+..+++|++|+|++|++++..+..+..+.+++ .+
T Consensus 127 ~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~ 206 (635)
T 4g8a_A 127 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSL 206 (635)
T ss_dssp CEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEE
T ss_pred CEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhh
Confidence 88888777777633 467777888888888877643 33467778888888888888777777777665544 56
Q ss_pred eeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccc-cCCccccCCCCCcEEEccCCcCcc-----cCCHH
Q 046275 271 NVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSG-KVPSRFGSCSSLESFDISSNKFSG-----ELPIE 344 (1176)
Q Consensus 271 ~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~-----~i~~~ 344 (1176)
+++.|.++...+..+. ...++.+++.+|.... ..+..+..+..++...+..+...+ .....
T Consensus 207 ~ls~n~l~~i~~~~~~-------------~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~ 273 (635)
T 4g8a_A 207 DLSLNPMNFIQPGAFK-------------EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKS 273 (635)
T ss_dssp ECTTCCCCEECTTTTT-------------TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTT
T ss_pred hcccCcccccCccccc-------------chhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccccc
Confidence 6777776643332221 1245666666665542 233455666666666554332211 12222
Q ss_pred HHhcCCCCCEEEccCcccCC---CCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCcccc
Q 046275 345 IFLSMSNLKELVLSFNDFTG---ALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLS 421 (1176)
Q Consensus 345 ~~~~l~~L~~L~Ls~N~l~~---~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~ 421 (1176)
.+..+..+..+.+..+.... ..+..+..+.+++.+++.+|.+....+. ....+++.|++.+|.+.+..+.
T Consensus 274 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~----~~~~~L~~L~l~~~~~~~~~~~--- 346 (635)
T 4g8a_A 274 ALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDF----SYNFGWQHLELVNCKFGQFPTL--- 346 (635)
T ss_dssp TTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGG----GSCCCCSEEEEESCEESSCCCC---
T ss_pred ccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccccc----ccchhhhhhhcccccccCcCcc---
Confidence 33444555555555443322 1233445566777777777766532221 1234577777777777644332
Q ss_pred ccccCcEEEcCCccccCCCCccccCCCccCeeecccccccC--CCCCCCCCccccceeecccccccCccccccccCCCCC
Q 046275 422 NCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHG--EIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLN 499 (1176)
Q Consensus 422 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 499 (1176)
.+..|+.++++.|.+... .....+++|+.|+++.|.+.. ..+..+..+.+|+.|+++.|.+. ..+..+..+++|+
T Consensus 347 ~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~ 423 (635)
T 4g8a_A 347 KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLE 423 (635)
T ss_dssp BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCC
T ss_pred cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-ccccccccccccc
Confidence 345677777777776532 234456777777777777642 34455556677777777777776 4555677777777
Q ss_pred eeeccccccCCCCC-ccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccc
Q 046275 500 WISLSNNHLGGEIP-TWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVG 578 (1176)
Q Consensus 500 ~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~ 578 (1176)
.+++++|++....+ ..+..+++++.++++.|.+.+..|..+..+++|+.|+|++|.+...+++
T Consensus 424 ~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~---------------- 487 (635)
T 4g8a_A 424 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP---------------- 487 (635)
T ss_dssp EEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEEC----------------
T ss_pred chhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCc----------------
Confidence 77777776654433 4466777778888888887777777777777888888877765432211
Q ss_pred cceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccc
Q 046275 579 KKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGS 658 (1176)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~ 658 (1176)
..|..+.+|++|||++|+|++.+|..|++
T Consensus 488 ---------------------------------------------------~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~ 516 (635)
T 4g8a_A 488 ---------------------------------------------------DIFTELRNLTFLDLSQCQLEQLSPTAFNS 516 (635)
T ss_dssp ---------------------------------------------------SCCTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred ---------------------------------------------------hhhhhccccCEEECCCCccCCcChHHHcC
Confidence 12334457888888888888888888888
Q ss_pred cccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCcccc-ccccccccccccccC
Q 046275 659 MSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSL-TLLNEIDLCNNQLTG 722 (1176)
Q Consensus 659 l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l-~~L~~l~ls~N~l~g 722 (1176)
+++|+.|+|++|+|++..|..|+.+++|++|||++|+|++.+|..+..+ ++|+.|+|++|+++.
T Consensus 517 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 517 LSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp CTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 8888888888888887777788888888888888888888888888877 678888888888763
No 34
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.7e-45 Score=445.84 Aligned_cols=432 Identities=20% Similarity=0.211 Sum_probs=360.8
Q ss_pred CccceeeccCCcccccCC-CccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhh
Q 046275 218 KNLQFLDVSSNNFSMAVP-SFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHL 296 (1176)
Q Consensus 218 ~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~ 296 (1176)
++|++|++++|+++++++ .|.++++|++|+|++|++++..|..|+++++|++|+|++|+|++ +| ..
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp-----------~~- 87 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-IS-----------CH- 87 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EE-----------CC-
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cC-----------cc-
Confidence 678888888888887764 58889999999999999998888899999999999999999872 22 22
Q ss_pred hhcCCCccEEEccCCcccc-cCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCC--CEEEccCccc--CCCCccccc
Q 046275 297 ADLCSSLVKLDLSSNNLSG-KVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNL--KELVLSFNDF--TGALPDSLS 371 (1176)
Q Consensus 297 ~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L--~~L~Ls~N~l--~~~~p~~l~ 371 (1176)
.+++|++|+|++|++++ .+|..|+++++|++|++++|.+++ ..|..+++| ++|++++|.+ ++..|..+.
T Consensus 88 --~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~ 161 (520)
T 2z7x_B 88 --PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK----SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQ 161 (520)
T ss_dssp --CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG----GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTT
T ss_pred --ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch----hhccccccceeeEEEeeccccccccccccccc
Confidence 36899999999999987 478999999999999999999984 346778888 9999999999 778888887
Q ss_pred CCC-CCCEEEccCCcCCCCCCccccCCCCCCccEEEccCcc-------ccCCCCccccccccCcEEEcCCccccCCCCcc
Q 046275 372 NLT-NLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNL-------LLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSS 443 (1176)
Q Consensus 372 ~l~-~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~-------l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 443 (1176)
.+. +...+++++|.+.+.++.... ..+++|+.|++++|. +.+.+| .++.+++|+.|++++|.+++..+..
T Consensus 162 ~l~~~~l~l~l~~n~~~~~~~~~~~-~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~ 239 (520)
T 2z7x_B 162 DFNTESLHIVFPTNKEFHFILDVSV-KTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIR 239 (520)
T ss_dssp TCCEEEEEEECCSSSCCCCCCCCCC-TTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHH
T ss_pred ccccceEEEEeccCcchhhhhhhhh-hcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHH
Confidence 776 344678899999887776543 357889999999998 776666 7889999999999999988543332
Q ss_pred cc---CCCccCeeecccccccCCCCCCC-----CCccccceeecccccccCccc-cccccC---CCCCeeeccccccCCC
Q 046275 444 LG---SLSKLQDLKLWLNQLHGEIPPEL-----GNIQTLETLFLDFNELTGTLP-AALSNC---TNLNWISLSNNHLGGE 511 (1176)
Q Consensus 444 ~~---~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~Ls~N~l~~~ 511 (1176)
+. ..++|++|++++|+++|.+|..+ +++++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+...
T Consensus 240 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~ 317 (520)
T 2z7x_B 240 ILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHM 317 (520)
T ss_dssp HHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCC
T ss_pred HHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccc
Confidence 21 24689999999999999999999 9999999999999999 455 566665 7899999999998743
Q ss_pred CCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcc--cCChhHHhhcccchhhhccccceeeeecCCC
Q 046275 512 IPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNG--SIPPALFKQSGKIAANFIVGKKYVYIKNDGS 589 (1176)
Q Consensus 512 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g--~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 589 (1176)
+ .+..+++|++|++++|++++.+|..++.+++|+.|+|++|++++ .+|..
T Consensus 318 -~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~-------------------------- 369 (520)
T 2z7x_B 318 -L-CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEM-------------------------- 369 (520)
T ss_dssp -C-CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHH--------------------------
T ss_pred -c-chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHH--------------------------
Confidence 2 13689999999999999999999999999999999999999985 22221
Q ss_pred CcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCcc-ccccccceeeecc
Q 046275 590 KECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKE-IGSMSYLFILNLG 668 (1176)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~-~~~l~~L~~L~L~ 668 (1176)
+..+.+|++|||++|++++.+|.. +..+++|+.|+|+
T Consensus 370 ------------------------------------------~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls 407 (520)
T 2z7x_B 370 ------------------------------------------TTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMS 407 (520)
T ss_dssp ------------------------------------------HTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECC
T ss_pred ------------------------------------------HhhCCCCCEEECCCCcCCcccccchhccCccCCEEECc
Confidence 223457999999999999878865 8899999999999
Q ss_pred CccccccCCccccCcCcccEEEccCccccccCCCCccccccccccccccccccCCCCC-CCCccccCCccccCCCCCC
Q 046275 669 HNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLTGMIPV-MGQFETFQPAKFLNNSGLC 745 (1176)
Q Consensus 669 ~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l~ 745 (1176)
+|++++.+|..+. ++|++|||++|+|+ .+|..+..+++|+.|+|++|++++.++. ...+..+......+|+.-|
T Consensus 408 ~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 408 SNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp SSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcc
Confidence 9999999998776 79999999999999 8999999999999999999999965554 4556666667777886555
No 35
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.7e-45 Score=463.86 Aligned_cols=415 Identities=20% Similarity=0.295 Sum_probs=309.6
Q ss_pred CCCcEEEcCCCcCCCCcChhhhccccCCeEee-ccccccCccCCCCcccc-----------------------------C
Q 046275 241 LALEYLDISANKFTGDVGHAISACEHLSFLNV-SSNLFSGPIPVGYNEFQ-----------------------------G 290 (1176)
Q Consensus 241 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L-s~N~l~~~~p~~~~~l~-----------------------------~ 290 (1176)
..++.|+|++|.++|.+|..++++++|++|+| ++|.++|..|....... +
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46899999999999999999999999999999 89988877443311110 0
Q ss_pred cchhhhh----------hcCCCccEEEccC--CcccccCCccccCCCCCcEEEccCCcCcc-----------------cC
Q 046275 291 EIPLHLA----------DLCSSLVKLDLSS--NNLSGKVPSRFGSCSSLESFDISSNKFSG-----------------EL 341 (1176)
Q Consensus 291 ~i~~~~~----------~~l~~L~~L~L~~--n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-----------------~i 341 (1176)
.++..+. .....++.+.+.. |++++ +|..|+++++|++|+|++|+++| .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 0000000 0112334444443 78887 88889999999999999999987 37
Q ss_pred CHHH-HhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCc-CCC-CCCccccC-----CCCCCccEEEccCcccc
Q 046275 342 PIEI-FLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNN-LSG-AIPHNLCQ-----GPRNSLKELFLQNNLLL 413 (1176)
Q Consensus 342 ~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~-----~~~~~L~~L~L~~N~l~ 413 (1176)
|..+ |.++++|++|+|++|.+.+.+|..++++++|+.|+|++|+ +++ .+|..+.. ..+++|+.|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 8775 4588999999999999888999999999999999999998 887 77775532 12458999999999998
Q ss_pred CCCCc--cccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccc-cceeecccccccCcccc
Q 046275 414 GSIPS--TLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQT-LETLFLDFNELTGTLPA 490 (1176)
Q Consensus 414 ~~~p~--~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~ 490 (1176)
.+|. .++++++|+.|+|++|+++ .+| .|+.+++|+.|+|++|+++ .+|..+.++++ |++|+|++|+++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 7888 8889999999999999998 788 8888999999999999988 88888988988 999999999998 7788
Q ss_pred ccccCCC--CCeeeccccccCCCCCccc---c--CCCCCCeEEccCCcccccCCCCCC-CCCCCCEEEccCCCCcccCCh
Q 046275 491 ALSNCTN--LNWISLSNNHLGGEIPTWI---G--QLSNLAILKLSNNSFYGRIPPELG-DCRSLIWLDLNTNLFNGSIPP 562 (1176)
Q Consensus 491 ~~~~l~~--L~~L~Ls~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~g~ip~ 562 (1176)
.+..+.. |+.|+|++|++++.+|... + .+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+++ .+|.
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~ 714 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPE 714 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCT
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccCh
Confidence 8877654 9999999999988766432 2 3458899999999998 6676654 7889999999999888 7777
Q ss_pred hHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEE
Q 046275 563 ALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLD 642 (1176)
Q Consensus 563 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ld 642 (1176)
.+|.... +.+..+.+|+.|+
T Consensus 715 ~~~~~~~------------------------------------------------------------~~l~nl~~L~~L~ 734 (876)
T 4ecn_A 715 NSLKPKD------------------------------------------------------------GNYKNTYLLTTID 734 (876)
T ss_dssp TSSSCTT------------------------------------------------------------SCCTTGGGCCEEE
T ss_pred HHhcccc------------------------------------------------------------ccccccCCccEEE
Confidence 6543210 0111223566677
Q ss_pred cccCcCccCCCcccc--ccccceeeeccCccccccCCccccCcCcccEEEccC------ccccccCCCCccccccccccc
Q 046275 643 ISYNMLSGSIPKEIG--SMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSS------NRLEGTIPSSMSSLTLLNEID 714 (1176)
Q Consensus 643 Ls~N~l~g~iP~~~~--~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~------N~l~g~iP~~l~~l~~L~~l~ 714 (1176)
|++|+|+ .+|..++ .+++|+.|+|++|+|++ +|..++.+++|+.|+|++ |++.+.+|..+.++++|+.|+
T Consensus 735 Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~ 812 (876)
T 4ecn_A 735 LRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQ 812 (876)
T ss_dssp CCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEE
T ss_pred CCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEE
Confidence 7777776 5666665 66677777777777765 666666777777776654 666666777777777777777
Q ss_pred cccccccCCCCC
Q 046275 715 LCNNQLTGMIPV 726 (1176)
Q Consensus 715 ls~N~l~g~~p~ 726 (1176)
|++|+| +.+|.
T Consensus 813 Ls~N~L-~~Ip~ 823 (876)
T 4ecn_A 813 IGSNDI-RKVDE 823 (876)
T ss_dssp CCSSCC-CBCCS
T ss_pred CCCCCC-CccCH
Confidence 777776 56665
No 36
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.7e-45 Score=410.00 Aligned_cols=252 Identities=24% Similarity=0.377 Sum_probs=189.4
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc-CHHHHHHHHHHHHhcCCCCcccceeEEeeCC--------
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ-GDREFTAEMETIGKIKHRNLVPLLGYCKVGE-------- 929 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 929 (1176)
++|++.+.||+|+||+||+|+++ +|+.||||++...... ..+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 35889999999999999999986 6999999998654332 2356889999999999999999999986543
Q ss_pred ----eeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEE
Q 046275 930 ----ERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVS 1005 (1176)
Q Consensus 930 ----~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 1005 (1176)
..|+||||+++|+|.+++...... ...++..++.++.||+.||+|||++ +||||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~-~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTI-EERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSG-GGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCC-ChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 368999999999999999876432 2356778899999999999999999 99999999999999999999999
Q ss_pred eeccccccccccccc----------cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccH
Q 046275 1006 DFGMARLMSAMDTHL----------SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNL 1075 (1176)
Q Consensus 1006 DfGla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~ 1075 (1176)
|||+|+......... .....+||+.|||||++.+..|+.++||||+||++|||++ ||... ...
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~----~~~ 233 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ----MER 233 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH----HHH
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc----cHH
Confidence 999998765432211 1234579999999999999999999999999999999996 76421 111
Q ss_pred HHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1076 VGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1076 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
............ ++.. ......+.+++.+||+.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~----p~~~-------~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 234 VRTLTDVRNLKF----PPLF-------TQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHHHTTCC----CHHH-------HHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhcCCC----CCCC-------cccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111122222111 1111 1112234569999999999999999999875
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8.6e-45 Score=448.09 Aligned_cols=461 Identities=20% Similarity=0.193 Sum_probs=268.8
Q ss_pred CcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCccccc--ccCCCCCccceee
Q 046275 147 LKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGD--INVSKCKNLQFLD 224 (1176)
Q Consensus 147 L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~ 224 (1176)
.+++++++|+++.+|.... ++|++|||++|+|++ ++...|.++++|++|+|++|.+++. ..+..+++|++|+
T Consensus 33 ~~~l~ls~~~L~~ip~~~~---~~L~~L~Ls~N~i~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 106 (562)
T 3a79_B 33 ESMVDYSNRNLTHVPKDLP---PRTKALSLSQNSISE---LRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLD 106 (562)
T ss_dssp CCEEECTTSCCCSCCTTSC---TTCCEEECCSSCCCC---CCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CcEEEcCCCCCccCCCCCC---CCcCEEECCCCCccc---cChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEE
Confidence 3555555555555544332 455555555555554 3344455555566666666655542 3356666777777
Q ss_pred ccCCcccccCCCccCCCCCcEEEcCCCcCCCC-cChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCc
Q 046275 225 VSSNNFSMAVPSFGDCLALEYLDISANKFTGD-VGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSL 303 (1176)
Q Consensus 225 Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~-~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L 303 (1176)
|++|+++.++.. .+++|++|+|++|++++. .|..|+++++|++|++++|.+++. .+ ..+++|
T Consensus 107 Ls~N~l~~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~------------~~l~~L 169 (562)
T 3a79_B 107 VSHNRLQNISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DL------------LPVAHL 169 (562)
T ss_dssp CTTSCCCEECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TT------------GGGTTS
T ss_pred CCCCcCCccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---ch------------hhhhhc
Confidence 777777655554 677777777777777653 356677777777777777776531 11 112333
Q ss_pred --cEEEccCCcc--cccCCccccCCC-CCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCC----CCcccccCCC
Q 046275 304 --VKLDLSSNNL--SGKVPSRFGSCS-SLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTG----ALPDSLSNLT 374 (1176)
Q Consensus 304 --~~L~L~~n~l--~~~~p~~~~~l~-~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~ 374 (1176)
++|++++|.+ ++..|..+..+. ..-.+++++|.+.+.++...+..+++|+.|++++|.... .....+..++
T Consensus 170 ~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~ 249 (562)
T 3a79_B 170 HLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGP 249 (562)
T ss_dssp CEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCS
T ss_pred eeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccC
Confidence 7777777777 666666666554 122456677777666666556667777777777764110 1123455666
Q ss_pred CCCEEEccCCcCCCCCCccccC-CCCCCccEEEccCccccCCCCccc-----cccccCcEEEcCCccccCCCC-ccccCC
Q 046275 375 NLETLDLSSNNLSGAIPHNLCQ-GPRNSLKELFLQNNLLLGSIPSTL-----SNCSQLVSLHLSFNYLTGTIP-SSLGSL 447 (1176)
Q Consensus 375 ~L~~L~Ls~N~l~~~~p~~~~~-~~~~~L~~L~L~~N~l~~~~p~~l-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~l 447 (1176)
+|+.|+++++.+++.....+.. ....+|++|++++|.++|.+|..+ .+++.|+.++++.|.+ .+| ..+..+
T Consensus 250 ~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~ 327 (562)
T 3a79_B 250 TLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSV 327 (562)
T ss_dssp SCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHH
T ss_pred cceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhh
Confidence 6777766666554321111000 001245555555555554444444 3444444444444443 222 111111
Q ss_pred CccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEc
Q 046275 448 SKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKL 527 (1176)
Q Consensus 448 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 527 (1176)
....+|++|++++|.+.... ....+++|++|++++|++++.+|.+++.+++|++|+|
T Consensus 328 ---------------------~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 384 (562)
T 3a79_B 328 ---------------------FAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLIL 384 (562)
T ss_dssp ---------------------HHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEEC
T ss_pred ---------------------hccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEEC
Confidence 00134555666666554211 1245666666666666666666666666666666666
Q ss_pred cCCcccc--cCCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhh
Q 046275 528 SNNSFYG--RIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIR 605 (1176)
Q Consensus 528 ~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (1176)
++|++++ .+|..+..+++|+.|+|++|++++.+|...|
T Consensus 385 ~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~---------------------------------------- 424 (562)
T 3a79_B 385 QRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTC---------------------------------------- 424 (562)
T ss_dssp CSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCC----------------------------------------
T ss_pred CCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhh----------------------------------------
Confidence 6666664 2345566677777777777776655553221
Q ss_pred hhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcCc
Q 046275 606 AERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRG 685 (1176)
Q Consensus 606 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~ 685 (1176)
..+.+|++|+|++|+++|.+|..+. ++|+.|+|++|+++ .||..++.+++
T Consensus 425 ---------------------------~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~ 474 (562)
T 3a79_B 425 ---------------------------AWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQA 474 (562)
T ss_dssp ---------------------------CCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCC
T ss_pred ---------------------------cCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCC
Confidence 1234566777777777766666554 57777888888777 67777778888
Q ss_pred ccEEEccCccccccCCCC-ccccccccccccccccccCCCCC
Q 046275 686 LNILDLSSNRLEGTIPSS-MSSLTLLNEIDLCNNQLTGMIPV 726 (1176)
Q Consensus 686 L~~L~Ls~N~l~g~iP~~-l~~l~~L~~l~ls~N~l~g~~p~ 726 (1176)
|++|+|++|+|+ .+|.. +..+++|+.|+|++|++++..|.
T Consensus 475 L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 475 LQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp CSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred CCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 888888888887 56666 77788888888888888776663
No 38
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=5e-42 Score=430.83 Aligned_cols=513 Identities=20% Similarity=0.156 Sum_probs=410.4
Q ss_pred CCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCccccc--ccCCCCCccce
Q 046275 145 SSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGD--INVSKCKNLQF 222 (1176)
Q Consensus 145 ~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 222 (1176)
+++++|+|++|+|+.++...|..+++|++|||++|+|+. ++..+|.++++|++|+|++|+++.. ..+..+++|++
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~---i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~ 128 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT---IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 128 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE---ECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCE
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCC---cChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCE
Confidence 489999999999999999999999999999999999986 7778899999999999999999974 35889999999
Q ss_pred eeccCCcccccCC-CccCCCCCcEEEcCCCcCCCC-cChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcC
Q 046275 223 LDVSSNNFSMAVP-SFGDCLALEYLDISANKFTGD-VGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLC 300 (1176)
Q Consensus 223 L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~-~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l 300 (1176)
|+|++|+++++++ .|+++++|++|+|++|++++. .|..+..+++|++|+|++|+|++..|..+..+. ...
T Consensus 129 L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~--------~l~ 200 (635)
T 4g8a_A 129 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH--------QMP 200 (635)
T ss_dssp EECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHH--------TCT
T ss_pred EECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchh--------hhh
Confidence 9999999998887 489999999999999999865 678899999999999999999976665543321 112
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCccc------CCCCcccccCCC
Q 046275 301 SSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDF------TGALPDSLSNLT 374 (1176)
Q Consensus 301 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l------~~~~p~~l~~l~ 374 (1176)
..+..++++.|.++...+..+ ....++.+++++|.....++...+..+..++...+..+.. .......+..+.
T Consensus 201 ~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 279 (635)
T 4g8a_A 201 LLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLC 279 (635)
T ss_dssp TCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGG
T ss_pred hhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccccccccccc
Confidence 345689999999996555444 4567889999999887667777788899998887765433 223344555666
Q ss_pred CCCEEEccCCcCCCCCCccc-cCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCee
Q 046275 375 NLETLDLSSNNLSGAIPHNL-CQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDL 453 (1176)
Q Consensus 375 ~L~~L~Ls~N~l~~~~p~~~-~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 453 (1176)
.+..+++..+.......... ......+++.+.+.+|.+.... .+....+|+.|++++|.+.+..+. .+..|+.+
T Consensus 280 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l 354 (635)
T 4g8a_A 280 NLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRL 354 (635)
T ss_dssp GSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEE
T ss_pred chhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhc
Confidence 67777766654432211111 0123457889999998887532 355667899999999998855443 45678889
Q ss_pred ecccccccCCCCCCCCCccccceeecccccccC--ccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCc
Q 046275 454 KLWLNQLHGEIPPELGNIQTLETLFLDFNELTG--TLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNS 531 (1176)
Q Consensus 454 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 531 (1176)
++..|.+.. +.....+++|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+. ..+..+..+++|+.+++++|.
T Consensus 355 ~l~~n~~~~--~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~ 431 (635)
T 4g8a_A 355 TFTSNKGGN--AFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSN 431 (635)
T ss_dssp EEESCCSCC--BCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSE
T ss_pred ccccccCCC--Ccccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhcc
Confidence 999888763 3345678999999999999863 45667778899999999999887 456678889999999999988
Q ss_pred ccccCC-CCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhcc
Q 046275 532 FYGRIP-PELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLS 610 (1176)
Q Consensus 532 l~~~~p-~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 610 (1176)
.....+ ..+..+++++.++++.|.+.+..|..
T Consensus 432 ~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~----------------------------------------------- 464 (635)
T 4g8a_A 432 LKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI----------------------------------------------- 464 (635)
T ss_dssp EESTTSSCTTTTCTTCCEEECTTSCCEECCTTT-----------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccc-----------------------------------------------
Confidence 876655 45788999999999999987644321
Q ss_pred ccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcC-ccCCCccccccccceeeeccCccccccCCccccCcCcccEE
Q 046275 611 RISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNML-SGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNIL 689 (1176)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l-~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L 689 (1176)
+....+++.|+|++|++ .+.+|..|+.+++|+.|+|++|+|++.+|..|+++++|++|
T Consensus 465 ---------------------~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 465 ---------------------FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp ---------------------TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ---------------------cccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 22345788999999985 55678999999999999999999999999999999999999
Q ss_pred EccCccccccCCCCccccccccccccccccccCCCCCC-CCc-cccCCccccCCCCCC
Q 046275 690 DLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLTGMIPVM-GQF-ETFQPAKFLNNSGLC 745 (1176)
Q Consensus 690 ~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~g~~p~~-~~~-~~~~~~~~~~n~~l~ 745 (1176)
+|++|+|++..|..+..+++|+.|||++|+|++.+|.. ..+ ..+......+|+.-|
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 99999999888888999999999999999999999964 233 356667778898777
No 39
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.5e-43 Score=402.95 Aligned_cols=202 Identities=27% Similarity=0.427 Sum_probs=173.0
Q ss_pred HHHhcCCCCCceEeEeCceEEEEEEEC----CCCEEEEEEeeccCCcCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCe
Q 046275 856 LEATNGFHNDSLIGSGGFGDVYKAKLK----DGSTVAIKKLIHISGQGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEE 930 (1176)
Q Consensus 856 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 930 (1176)
....++|++.+.||+|+||+||+|+++ +++.||+|++... ....++.+|+++++.+ +|||||++++++.+.+.
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 345678999999999999999999864 4678999988643 3456788999999998 69999999999999999
Q ss_pred eEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCC-CcEEEEeecc
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDEN-FEARVSDFGM 1009 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGl 1009 (1176)
.|+||||+++|+|.++++ .+++.+++.++.|++.||+|||++ +||||||||+|||++.+ +.+||+|||+
T Consensus 95 ~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGl 164 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGL 164 (361)
T ss_dssp EEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence 999999999999999984 488999999999999999999999 99999999999999876 7999999999
Q ss_pred cccccccccc--------------------------ccccccccCCcccCccccCCC-CCCchhhhHHHHHHHHHHHcCC
Q 046275 1010 ARLMSAMDTH--------------------------LSVSTLAGTPGYVPPEYYQSF-RCSTKGDVYSYGVVLLELLTGK 1062 (1176)
Q Consensus 1010 a~~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~ 1062 (1176)
|+........ ......+||+.|||||++.+. .|+.++||||+||++|||++|+
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~ 244 (361)
T 4f9c_A 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244 (361)
T ss_dssp CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence 9765432110 112345799999999999775 5899999999999999999999
Q ss_pred CCCCCCC
Q 046275 1063 RPTDSAD 1069 (1176)
Q Consensus 1063 ~P~~~~~ 1069 (1176)
.||....
T Consensus 245 ~Pf~~~~ 251 (361)
T 4f9c_A 245 YPFYKAS 251 (361)
T ss_dssp SSSSCCS
T ss_pred CCCCCCC
Confidence 9996543
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.8e-43 Score=405.06 Aligned_cols=265 Identities=23% Similarity=0.343 Sum_probs=200.4
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEee------CC
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKV------GE 929 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~ 929 (1176)
.++|++.+.||+|+||+||+|+++ +|+.||||++..... ...+.+.+|+++|+.++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 357999999999999999999986 699999999864322 223568899999999999999999998754 35
Q ss_pred eeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecc
Q 046275 930 ERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGM 1009 (1176)
Q Consensus 930 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 1009 (1176)
..|+|||||+ |+|.+++...+ ++++..++.++.||+.||+|||++ +||||||||+|||++.++.+||+|||+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~----~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ----PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEEeCCC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 7899999996 68999998654 699999999999999999999999 999999999999999999999999999
Q ss_pred cccccccc--ccccccccccCCcccCccccCCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccc
Q 046275 1010 ARLMSAMD--THLSVSTLAGTPGYVPPEYYQSF-RCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLK 1086 (1176)
Q Consensus 1010 a~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 1086 (1176)
|+.+.... ........+||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+..+ .+...........
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~~~g~p~ 283 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMVLGTPS 283 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCC
Confidence 98664322 12223567899999999998775 56999999999999999999999997643111 0111111110000
Q ss_pred cccccC-----------cccccCCCchHHH-----HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1087 ISDVFD-----------PELMKEDPNIEIE-----LLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1087 ~~~~~~-----------~~~~~~~~~~~~~-----~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.+... ..+....+..... -..+.+|+.+||+.||++|||++|+++|
T Consensus 284 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 284 -PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp -GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 0000000100000 1245679999999999999999999987
No 41
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.8e-42 Score=427.29 Aligned_cols=454 Identities=22% Similarity=0.228 Sum_probs=300.9
Q ss_pred cccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEE
Q 046275 122 SSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQL 201 (1176)
Q Consensus 122 ~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L 201 (1176)
+++|+++|.+++.+..+ .++|++|+|++|+|+.++...+..+++|++|+|++|+|++ ++...|.++++|++|
T Consensus 34 ~~l~ls~~~L~~ip~~~-----~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~---~~~~~~~~l~~L~~L 105 (562)
T 3a79_B 34 SMVDYSNRNLTHVPKDL-----PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRS---LDFHVFLFNQDLEYL 105 (562)
T ss_dssp CEEECTTSCCCSCCTTS-----CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCE---ECTTTTTTCTTCCEE
T ss_pred cEEEcCCCCCccCCCCC-----CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCc---CCHHHhCCCCCCCEE
Confidence 55666666555443322 1566666666666666666666666666666666666664 444556666667777
Q ss_pred EeCCCcccccccCCCCCccceeeccCCcccccC--CCccCCCCCcEEEcCCCcCCCCcChhhhccccC--CeEeeccccc
Q 046275 202 ALKGNKVTGDINVSKCKNLQFLDVSSNNFSMAV--PSFGDCLALEYLDISANKFTGDVGHAISACEHL--SFLNVSSNLF 277 (1176)
Q Consensus 202 ~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L--~~L~Ls~N~l 277 (1176)
+|++|.++..... .+++|++|++++|++++++ ..++++++|++|+|++|++++. .+..+++| ++|++++|.+
T Consensus 106 ~Ls~N~l~~lp~~-~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 106 DVSHNRLQNISCC-PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp ECTTSCCCEECSC-CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSC
T ss_pred ECCCCcCCccCcc-ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccc
Confidence 7777766653333 6778888888888887654 4678888888888888888753 34555555 8888888888
Q ss_pred --cCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCc-cccCCCCCcEEEccCCcC-----cccCCHHHHhcC
Q 046275 278 --SGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPS-RFGSCSSLESFDISSNKF-----SGELPIEIFLSM 349 (1176)
Q Consensus 278 --~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l-----~~~i~~~~~~~l 349 (1176)
++..|..+..+. .....+++++|.+.+.++. .+..+++|+.|++++|+. .+.+ ..|..+
T Consensus 182 ~~~~~~~~~l~~l~-----------~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~--~~l~~l 248 (562)
T 3a79_B 182 HIKGGETESLQIPN-----------TTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFL--SELTRG 248 (562)
T ss_dssp CCCSSSCCEEEECC-----------EEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHH--HHHHSC
T ss_pred cccccCcccccccC-----------cceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHH--HHHhcc
Confidence 666555443321 0122567788887765543 566778888888888852 2222 235778
Q ss_pred CCCCEEEccCcccCCC----CcccccCCCCCCEEEccCCcCCCCCCccccCCC---CCCccEEEccCccccCCCC-cccc
Q 046275 350 SNLKELVLSFNDFTGA----LPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGP---RNSLKELFLQNNLLLGSIP-STLS 421 (1176)
Q Consensus 350 ~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~---~~~L~~L~L~~N~l~~~~p-~~l~ 421 (1176)
++|+.|+++++.+++. ++..+ ..++|++|++++|.++|.+|..++... ++.|+.++++.|.+ .+| ..+.
T Consensus 249 ~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~ 325 (562)
T 3a79_B 249 PTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALY 325 (562)
T ss_dssp SSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHH
T ss_pred CcceEEEecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhh
Confidence 8888888888777642 12222 235889999999999888888765432 34444455555555 334 2222
Q ss_pred cc---ccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCC
Q 046275 422 NC---SQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNL 498 (1176)
Q Consensus 422 ~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 498 (1176)
.+ .+|+.|++++|.+.... + .+.+++|++|+|++|++++.+|..+.++++|
T Consensus 326 ~~~~~~~L~~L~l~~n~~~~~~---~-----------------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 379 (562)
T 3a79_B 326 SVFAEMNIKMLSISDTPFIHMV---C-----------------------PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRL 379 (562)
T ss_dssp HHHHTCCCSEEEEESSCCCCCC---C-----------------------CSSCCCCCEEECCSSCCCTTTTTTCCSCSSC
T ss_pred hhhccCcceEEEccCCCccccc---C-----------------------ccCCCCceEEECCCCccccchhhhhcccCCC
Confidence 22 45777777777664211 1 1334555555555555555555566666666
Q ss_pred CeeeccccccCC--CCCccccCCCCCCeEEccCCcccccCCC-CCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhh
Q 046275 499 NWISLSNNHLGG--EIPTWIGQLSNLAILKLSNNSFYGRIPP-ELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANF 575 (1176)
Q Consensus 499 ~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~ 575 (1176)
++|+|++|++++ .+|..++.+++|++|+|++|++++.+|. .+..+++|+.|+|++|++++.+|..+
T Consensus 380 ~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l----------- 448 (562)
T 3a79_B 380 QTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL----------- 448 (562)
T ss_dssp CEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSC-----------
T ss_pred CEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhh-----------
Confidence 666666666654 2235567777777777777777764554 46777888888888888875433210
Q ss_pred ccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCcc
Q 046275 576 IVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKE 655 (1176)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~ 655 (1176)
. .+|++|||++|+|+ .+|..
T Consensus 449 ---------------------------------------------------------~--~~L~~L~L~~N~l~-~ip~~ 468 (562)
T 3a79_B 449 ---------------------------------------------------------P--PKVKVLDLHNNRIM-SIPKD 468 (562)
T ss_dssp ---------------------------------------------------------C--TTCSEEECCSSCCC-CCCTT
T ss_pred ---------------------------------------------------------c--CcCCEEECCCCcCc-ccChh
Confidence 0 25788999999998 78888
Q ss_pred ccccccceeeeccCccccccCCcc-ccCcCcccEEEccCccccccCC
Q 046275 656 IGSMSYLFILNLGHNNLSGPIPTE-VGDLRGLNILDLSSNRLEGTIP 701 (1176)
Q Consensus 656 ~~~l~~L~~L~L~~N~l~g~iP~~-~~~L~~L~~L~Ls~N~l~g~iP 701 (1176)
++.+++|+.|+|++|+|+ .+|.. ++.+++|++|+|++|.+++..|
T Consensus 469 ~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 469 VTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp TTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred hcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 889999999999999999 67776 9999999999999999997655
No 42
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.2e-43 Score=419.91 Aligned_cols=249 Identities=26% Similarity=0.333 Sum_probs=201.0
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHH---HHHHHhcCCCCcccceeEEeeCCeeE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAE---METIGKIKHRNLVPLLGYCKVGEERL 932 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E---~~~l~~l~h~niv~l~~~~~~~~~~~ 932 (1176)
++|++.++||+|+||+||+|+++ +|+.||+|++.+. .......+.+| +.+++.++|||||+++++|.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57999999999999999999987 6999999998642 12233334444 56667779999999999999999999
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccc
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1012 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 1012 (1176)
+||||++||+|.+++...+ .+++..++.++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.
T Consensus 269 lVmEy~~GGdL~~~l~~~~----~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEECCCCSCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 9999999999999998765 699999999999999999999999 999999999999999999999999999987
Q ss_pred cccccccccccccccCCcccCccccC-CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccccccc
Q 046275 1013 MSAMDTHLSVSTLAGTPGYVPPEYYQ-SFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVF 1091 (1176)
Q Consensus 1013 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1091 (1176)
..... ....+||+.|||||++. +..|+.++||||+||++|||++|+.||......+ .............
T Consensus 342 ~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~~~i~~~~~---- 411 (689)
T 3v5w_A 342 FSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRMTLTMAV---- 411 (689)
T ss_dssp CSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHHHHHHHCCC----
T ss_pred cCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHhhcCCCC----
Confidence 65432 24568999999999996 4579999999999999999999999997543222 2222222222111
Q ss_pred CcccccCCCchHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 046275 1092 DPELMKEDPNIEIELLQHLHVASACLDDRPWRRPT-----MIQVMAM 1133 (1176)
Q Consensus 1092 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt-----~~evl~~ 1133 (1176)
..+...+ ..+.+|+.+||+.||.+|++ ++||++|
T Consensus 412 --~~p~~~S------~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 412 --ELPDSFS------PELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp --CCCTTSC------HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred --CCCccCC------HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 1111111 13557999999999999998 7888765
No 43
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1e-41 Score=415.56 Aligned_cols=252 Identities=21% Similarity=0.319 Sum_probs=210.1
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeec
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYM 938 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 938 (1176)
++|++.+.||+|+||+||+|+++ +|+.||+|++........+.+.+|+++|+.++|||||+++++|.++...|+|||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 57999999999999999999986 69999999987655555667899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCC--CcEEEEeeccccccccc
Q 046275 939 RYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDEN--FEARVSDFGMARLMSAM 1016 (1176)
Q Consensus 939 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~DfGla~~~~~~ 1016 (1176)
+||+|.+++.... ..+++.+++.++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 237 ~gg~L~~~i~~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~ 310 (573)
T 3uto_A 237 SGGELFEKVADEH---NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310 (573)
T ss_dssp CCCBHHHHHTCTT---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred CCCcHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence 9999999997543 2689999999999999999999999 99999999999999854 88999999999877543
Q ss_pred cccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcccc
Q 046275 1017 DTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELM 1096 (1176)
Q Consensus 1017 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1176)
.. ....+||+.|||||++.+..|+.++||||+||++|||++|+.||...+ .......+..... .+++..+
T Consensus 311 ~~---~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~-----~~~~~~~i~~~~~--~~~~~~~ 380 (573)
T 3uto_A 311 QS---VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN-----DDETLRNVKSCDW--NMDDSAF 380 (573)
T ss_dssp SE---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHTTCC--CCCSGGG
T ss_pred Cc---eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHHHhCCC--CCCcccc
Confidence 22 345689999999999999999999999999999999999999997543 2222222222221 1222222
Q ss_pred cCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1097 KEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1097 ~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+ ..+.+|+.+||+.||++|||+.|+++|
T Consensus 381 ~~~s------~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 381 SGIS------EDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TTSC------HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cCCC------HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2222 135679999999999999999999885
No 44
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=8.7e-42 Score=390.11 Aligned_cols=287 Identities=37% Similarity=0.613 Sum_probs=237.1
Q ss_pred cCHHHHHHHhcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCC
Q 046275 850 LTFADLLEATNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGE 929 (1176)
Q Consensus 850 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 929 (1176)
+++.++..++++|++.+.||+|+||.||+|++++|+.||+|++........+.+.+|+.++++++||||+++++++...+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 44445566788999999999999999999998889999999987665556678999999999999999999999999999
Q ss_pred eeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecc
Q 046275 930 ERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGM 1009 (1176)
Q Consensus 930 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 1009 (1176)
..++||||+++|+|.+++.........+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999999999999999976654445699999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCC-CccHHHHHH-Hhhcccc
Q 046275 1010 ARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFG-DNNLVGWVK-QHAKLKI 1087 (1176)
Q Consensus 1010 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~-~~~~~~~~~-~~~~~~~ 1087 (1176)
++...............||+.|+|||++.+..++.++||||||+++|||++|+.||...... ......|.. .......
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 98654433332334456899999999998889999999999999999999999999765432 234455542 2333444
Q ss_pred ccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1088 SDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1088 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
...+++......+ ......+.+++.+||+.||++|||+.|++++|+.+.+..
T Consensus 266 ~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 266 EQIVDPNLADKIR--PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp CSSSSSSCTTCSC--HHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHhcChhhccccC--HHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 4555555443332 234456778999999999999999999999999987643
No 45
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.8e-41 Score=402.56 Aligned_cols=362 Identities=22% Similarity=0.223 Sum_probs=305.8
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEE
Q 046275 301 SSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLD 380 (1176)
Q Consensus 301 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 380 (1176)
++|++|+|++|.+++..|..|.++++|++|++++|.+.+.++...|.++++|++|+|++|.+++..|..+.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 67888888888888777888889999999999999887778777788899999999999999888888899999999999
Q ss_pred ccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCcc-ccccccCcEEEcCCccccCCCCccccCC--CccCeeeccc
Q 046275 381 LSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPST-LSNCSQLVSLHLSFNYLTGTIPSSLGSL--SKLQDLKLWL 457 (1176)
Q Consensus 381 Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~L~~ 457 (1176)
|++|++++.+|.......+++|++|+|++|.+++..|.. +.++++|++|++++|++++..|..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 999998876555422355778999999999998877766 7889999999999999998888888766 7889999999
Q ss_pred ccccCCCCCCC--------CCccccceeecccccccCccccccccC---CCCCeeeccccccCCC----------CCccc
Q 046275 458 NQLHGEIPPEL--------GNIQTLETLFLDFNELTGTLPAALSNC---TNLNWISLSNNHLGGE----------IPTWI 516 (1176)
Q Consensus 458 N~l~~~~p~~~--------~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~----------~p~~~ 516 (1176)
|.+.+..+..+ ..+++|++|+|++|++++..|..+..+ ++|+.|++++|.+.+. .+..+
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 99886555443 366889999999999998888887765 8899999999866542 22223
Q ss_pred cC--CCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccC
Q 046275 517 GQ--LSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHG 594 (1176)
Q Consensus 517 ~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 594 (1176)
.. .++|++|++++|.+++.+|..++.+++|+.|+|++|++++..|..
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~------------------------------- 318 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNA------------------------------- 318 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTT-------------------------------
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhH-------------------------------
Confidence 22 368999999999999999999999999999999999998644432
Q ss_pred CCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccceeeeccCccccc
Q 046275 595 AGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSG 674 (1176)
Q Consensus 595 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g 674 (1176)
|..+.+|++|+|++|++++..|..|+++++|+.|+|++|++++
T Consensus 319 -------------------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 361 (455)
T 3v47_A 319 -------------------------------------FWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA 361 (455)
T ss_dssp -------------------------------------TTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCE
T ss_pred -------------------------------------hcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccc
Confidence 2334579999999999999889999999999999999999998
Q ss_pred cCCccccCcCcccEEEccCccccccCCCCccccccccccccccccccCCCCCCCCc
Q 046275 675 PIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLTGMIPVMGQF 730 (1176)
Q Consensus 675 ~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~g~~p~~~~~ 730 (1176)
..|..|+.+++|++|+|++|+|++..|..+..+++|+.|+|++|++++.+|....+
T Consensus 362 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l 417 (455)
T 3v47_A 362 LGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 417 (455)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHH
T ss_pred cChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcchHH
Confidence 88999999999999999999999766667899999999999999999999975444
No 46
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.6e-41 Score=386.03 Aligned_cols=288 Identities=43% Similarity=0.746 Sum_probs=237.4
Q ss_pred ccccCHHHHHHHhcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEE
Q 046275 847 LRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYC 925 (1176)
Q Consensus 847 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~ 925 (1176)
...+++.++..+.++|++.+.||+|+||+||+|++.+|+.||||++..... .....+.+|+++++.++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 456888999999999999999999999999999988899999999865332 2334689999999999999999999999
Q ss_pred eeCCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEE
Q 046275 926 KVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVS 1005 (1176)
Q Consensus 926 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 1005 (1176)
......++||||+++|+|.+++........++++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999998876555569999999999999999999999877789999999999999999999999
Q ss_pred eeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC---CCCCccHHHHHHHh
Q 046275 1006 DFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSA---DFGDNNLVGWVKQH 1082 (1176)
Q Consensus 1006 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~---~~~~~~~~~~~~~~ 1082 (1176)
|||+++........ ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||... .........|....
T Consensus 177 Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 177 DFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCSSCEECCSSSSC-EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred cCccccccCccccc-ccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 99999876543322 224456999999999998888999999999999999999999999631 12334455555333
Q ss_pred h-ccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 046275 1083 A-KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 1137 (1176)
Q Consensus 1083 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i 1137 (1176)
. ........+.......+ ......+.+++.+||+.||++|||++||+++|+..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 256 LKEKKLEALVDVDLQGNYK--DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TSSCCSTTSSCTTCTTSCC--HHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred hhchhhhhhcChhhccccC--HHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 2 23333444444433332 33556778899999999999999999999999863
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.6e-40 Score=396.23 Aligned_cols=376 Identities=26% Similarity=0.271 Sum_probs=243.9
Q ss_pred CccceeeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhcccc-------------CCeEeeccccccCccCCC
Q 046275 218 KNLQFLDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISACEH-------------LSFLNVSSNLFSGPIPVG 284 (1176)
Q Consensus 218 ~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~-------------L~~L~Ls~N~l~~~~p~~ 284 (1176)
++|++|++++|+++.+|++++++++|++|++++|++++..|..++++.+ |++|++++|.+++. |.
T Consensus 11 ~~L~~L~l~~n~l~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l-p~- 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNLTEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-PE- 88 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-CS-
T ss_pred ccchhhhcccCchhhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-CC-
Confidence 4445555555555444444555555555555555555444544444443 58888888887742 11
Q ss_pred CccccCcchhhhhhcCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCC
Q 046275 285 YNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTG 364 (1176)
Q Consensus 285 ~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~ 364 (1176)
..++|++|++++|++++ +|.. +++|++|++++|+++ .+|. ..++|++|++++|.+++
T Consensus 89 --------------~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~----~~~~L~~L~L~~n~l~~ 145 (454)
T 1jl5_A 89 --------------LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSD----LPPLLEYLGVSNNQLEK 145 (454)
T ss_dssp --------------CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCS----CCTTCCEEECCSSCCSS
T ss_pred --------------CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC-cccC----CCCCCCEEECcCCCCCC
Confidence 12578888888888886 5643 378888888888887 4442 12688888888888885
Q ss_pred CCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccc
Q 046275 365 ALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSL 444 (1176)
Q Consensus 365 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 444 (1176)
+| .++++++|++|++++|++++ +|... .+|++|++++|++++ +| .++++++|++|++++|++++ +|...
T Consensus 146 -lp-~~~~l~~L~~L~l~~N~l~~-lp~~~-----~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~ 214 (454)
T 1jl5_A 146 -LP-ELQNSSFLKIIDVDNNSLKK-LPDLP-----PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP 214 (454)
T ss_dssp -CC-CCTTCTTCCEEECCSSCCSC-CCCCC-----TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC
T ss_pred -Cc-ccCCCCCCCEEECCCCcCcc-cCCCc-----ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc
Confidence 66 58888888888888888884 55432 478888888888886 55 58888888888888888885 55433
Q ss_pred cCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCe
Q 046275 445 GSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAI 524 (1176)
Q Consensus 445 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 524 (1176)
++|++|++++|.++ .+| .++.+++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. +++|++
T Consensus 215 ---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~ 281 (454)
T 1jl5_A 215 ---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTF 281 (454)
T ss_dssp ---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCE
T ss_pred ---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCE
Confidence 47888888888888 677 48888888888888888885 4443 3788888888888885 5553 378888
Q ss_pred EEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhh
Q 046275 525 LKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGI 604 (1176)
Q Consensus 525 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (1176)
|++++|++++ +|.. .++|+.|++++|++++ +|.
T Consensus 282 L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~-i~~------------------------------------------ 314 (454)
T 1jl5_A 282 LDVSENIFSG-LSEL---PPNLYYLNASSNEIRS-LCD------------------------------------------ 314 (454)
T ss_dssp EECCSSCCSE-ESCC---CTTCCEEECCSSCCSE-ECC------------------------------------------
T ss_pred EECcCCccCc-ccCc---CCcCCEEECcCCcCCc-ccC------------------------------------------
Confidence 8888888886 2221 1578888888888764 110
Q ss_pred hhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcC
Q 046275 605 RAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLR 684 (1176)
Q Consensus 605 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~ 684 (1176)
...+|++|+|++|++++ +|.. +++|+.|+|++|+++ .+|. .++
T Consensus 315 -----------------------------~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~ 357 (454)
T 1jl5_A 315 -----------------------------LPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQ 357 (454)
T ss_dssp -----------------------------CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCT
T ss_pred -----------------------------CcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhh
Confidence 00257788888888886 6765 477888888888888 5776 478
Q ss_pred cccEEEccCccccc--cCCCCcccc-------------ccccccccccccccC--CCCC
Q 046275 685 GLNILDLSSNRLEG--TIPSSMSSL-------------TLLNEIDLCNNQLTG--MIPV 726 (1176)
Q Consensus 685 ~L~~L~Ls~N~l~g--~iP~~l~~l-------------~~L~~l~ls~N~l~g--~~p~ 726 (1176)
+|++|+|++|+++| .+|.++.+| ++|+.||+++|+++| .+|.
T Consensus 358 ~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 358 NLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp TCCEEECCSSCCSSCCCCCTTCCEEECCC------------------------------
T ss_pred hccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccchh
Confidence 88888888888888 788888888 889999999999998 7775
No 48
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.3e-40 Score=394.83 Aligned_cols=386 Identities=19% Similarity=0.182 Sum_probs=292.2
Q ss_pred ceeeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcC
Q 046275 221 QFLDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLC 300 (1176)
Q Consensus 221 ~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l 300 (1176)
+.+++++++++.++. + .++|++|+|++|++++..+..|.++++|++|+|++|.+.+.++ ...+..+
T Consensus 13 ~~~~c~~~~l~~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~-----------~~~~~~l 78 (455)
T 3v47_A 13 YNAICINRGLHQVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIR-----------NNTFRGL 78 (455)
T ss_dssp TEEECCSSCCSSCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEEC-----------TTTTTTC
T ss_pred cccCcCCCCcccCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceEC-----------ccccccc
Confidence 346666677666655 2 2667777777777777777777777777777777777654332 2223345
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCH-HHHhcCCCCCEEEccCcccCCCCccc-ccCCCCCCE
Q 046275 301 SSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPI-EIFLSMSNLKELVLSFNDFTGALPDS-LSNLTNLET 378 (1176)
Q Consensus 301 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~ 378 (1176)
++|++|+|++|++++..|..|+++++|++|+|++|++++.++. ..|..+++|++|+|++|.+++..|.. +.++++|++
T Consensus 79 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~ 158 (455)
T 3v47_A 79 SSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHV 158 (455)
T ss_dssp TTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCE
T ss_pred ccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccE
Confidence 6788888888888777777788888888888888888753332 23567788888888888887766665 677888888
Q ss_pred EEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCcc--------ccccccCcEEEcCCccccCCCCccccCC---
Q 046275 379 LDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPST--------LSNCSQLVSLHLSFNYLTGTIPSSLGSL--- 447 (1176)
Q Consensus 379 L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~--------l~~l~~L~~L~Ls~N~l~~~~p~~~~~l--- 447 (1176)
|+|++|++++..|..+......+|+.|++++|.+.+..+.. +..+++|++|++++|++++..|..+..+
T Consensus 159 L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~ 238 (455)
T 3v47_A 159 LDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAG 238 (455)
T ss_dssp EECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTT
T ss_pred EeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccc
Confidence 88888888777676665444467788888888887654433 3356788888888888887777766544
Q ss_pred CccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccC--CCCCeeeccccccCCCCCccccCCCCCCeE
Q 046275 448 SKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNC--TNLNWISLSNNHLGGEIPTWIGQLSNLAIL 525 (1176)
Q Consensus 448 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 525 (1176)
++|+.|++++|.+.+.. +..+.+.+..+..+.++ ++|++|++++|++++.+|..++.+++|++|
T Consensus 239 ~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 304 (455)
T 3v47_A 239 TKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQL 304 (455)
T ss_dssp CCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred cceeeEeeccccccccc--------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEE
Confidence 77888888888765331 22333333334444443 689999999999999899999999999999
Q ss_pred EccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhh
Q 046275 526 KLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIR 605 (1176)
Q Consensus 526 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (1176)
+|++|++++..|..|.++++|+.|+|++|.+++..|..
T Consensus 305 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~------------------------------------------ 342 (455)
T 3v47_A 305 TLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRM------------------------------------------ 342 (455)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGG------------------------------------------
T ss_pred ECCCCcccccChhHhcCcccCCEEECCCCccCCcChhH------------------------------------------
Confidence 99999999888999999999999999999997533321
Q ss_pred hhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcCc
Q 046275 606 AERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRG 685 (1176)
Q Consensus 606 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~ 685 (1176)
|..+.+|++|||++|++++.+|..|+.+++|+.|+|++|++++..+..++.+++
T Consensus 343 --------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 396 (455)
T 3v47_A 343 --------------------------FENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTS 396 (455)
T ss_dssp --------------------------GTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred --------------------------hcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCc
Confidence 223457899999999999999999999999999999999999766667899999
Q ss_pred ccEEEccCccccccCCC
Q 046275 686 LNILDLSSNRLEGTIPS 702 (1176)
Q Consensus 686 L~~L~Ls~N~l~g~iP~ 702 (1176)
|++|+|++|++++.+|.
T Consensus 397 L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 397 LQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CCEEECCSSCBCCCTTT
T ss_pred ccEEEccCCCcccCCCc
Confidence 99999999999998874
No 49
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.6e-40 Score=394.30 Aligned_cols=242 Identities=21% Similarity=0.195 Sum_probs=143.3
Q ss_pred CcccccccccCCCCCCCcccCCCCCccccCccccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccccccccccCC
Q 046275 91 TLDTLETLSLKNSNISGTISLPAGSRCSSFLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREAGSLKLS 170 (1176)
Q Consensus 91 ~~~~L~~L~L~~n~l~g~~~~~~~~~~~~~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~ 170 (1176)
..+.|+.|++++|++ | .+|..+..+++|++|++++|.+.+..+. .++.+.+|+.+++++|.. .+
T Consensus 9 ~~~~L~~L~l~~n~l-~--~iP~~i~~L~~L~~L~l~~n~~~~~~p~--~~~~l~~L~~l~l~~c~~-----------~~ 72 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-T--EMPVEAENVKSKTEYYNAWSEWERNAPP--GNGEQREMAVSRLRDCLD-----------RQ 72 (454)
T ss_dssp ----------------------------CCHHHHHHHHHHHHHTSCT--TSCCCHHHHHHHHHHHHH-----------HT
T ss_pred ccccchhhhcccCch-h--hCChhHhcccchhhhhccCCcccccCCc--ccccchhcchhhhhhhhc-----------cC
Confidence 357888999999999 4 5677888999999999999998865443 366777776666665521 35
Q ss_pred CcEEEccCCCCCCCCccccccccCCCCccEEEeCCCcccccccCCCCCccceeeccCCcccccCCCccCCCCCcEEEcCC
Q 046275 171 LEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGDINVSKCKNLQFLDVSSNNFSMAVPSFGDCLALEYLDISA 250 (1176)
Q Consensus 171 L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~ 250 (1176)
+++|++++|.+++++.+ .++|++|++++|.+++... .+++|++|++++|++++++.. .++|++|++++
T Consensus 73 l~~L~l~~~~l~~lp~~-------~~~L~~L~l~~n~l~~lp~--~~~~L~~L~l~~n~l~~l~~~---~~~L~~L~L~~ 140 (454)
T 1jl5_A 73 AHELELNNLGLSSLPEL-------PPHLESLVASCNSLTELPE--LPQSLKSLLVDNNNLKALSDL---PPLLEYLGVSN 140 (454)
T ss_dssp CSEEECTTSCCSCCCSC-------CTTCSEEECCSSCCSSCCC--CCTTCCEEECCSSCCSCCCSC---CTTCCEEECCS
T ss_pred CCEEEecCCccccCCCC-------cCCCCEEEccCCcCCcccc--ccCCCcEEECCCCccCcccCC---CCCCCEEECcC
Confidence 67777777777763322 2466677777766665322 246777777777777765432 15778888888
Q ss_pred CcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccccCCCCCcEE
Q 046275 251 NKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESF 330 (1176)
Q Consensus 251 N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 330 (1176)
|++++ +| .++++++|++|++++|++++ +|.. ..+|++|++++|++++ +| .++++++|++|
T Consensus 141 n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~---------------~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L 200 (454)
T 1jl5_A 141 NQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL---------------PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAI 200 (454)
T ss_dssp SCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC---------------CTTCCEEECCSSCCSS-CC-CCTTCTTCCEE
T ss_pred CCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC---------------cccccEEECcCCcCCc-Cc-cccCCCCCCEE
Confidence 88876 44 47777888888888887764 2221 1367777777777775 44 47777777777
Q ss_pred EccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCC
Q 046275 331 DISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLS 387 (1176)
Q Consensus 331 ~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 387 (1176)
++++|+++ .+|. ..++|++|++++|.++ .+| .++.+++|++|++++|+++
T Consensus 201 ~l~~N~l~-~l~~----~~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~ 250 (454)
T 1jl5_A 201 YADNNSLK-KLPD----LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLK 250 (454)
T ss_dssp ECCSSCCS-SCCC----CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCS
T ss_pred ECCCCcCC-cCCC----CcCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCC
Confidence 77777776 3442 1246677777777666 455 3666666666666666665
No 50
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.1e-40 Score=371.46 Aligned_cols=251 Identities=25% Similarity=0.381 Sum_probs=208.2
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
.++|++.+.||+|+||+||+|++. +|+.||+|++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 357999999999999999999875 6899999999776666677899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD 1017 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 1017 (1176)
+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 99 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp CTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 9999999999754 489999999999999999999999 99999999999999999999999999998665432
Q ss_pred ccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCccccc
Q 046275 1018 THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMK 1097 (1176)
Q Consensus 1018 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1176)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||...+. .................+ .
T Consensus 171 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~---~ 240 (297)
T 3fxz_A 171 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-----LRALYLIATNGTPELQNP---E 240 (297)
T ss_dssp C--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHHCSCCCSCG---G
T ss_pred c--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCCCCCCCc---c
Confidence 2 23456799999999999999999999999999999999999999965431 111111111111111111 1
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1098 EDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1098 ~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
..+ ..+.+++.+||+.||++|||++|++++
T Consensus 241 ~~~------~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 241 KLS------AIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp GSC------HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccC------HHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111 135579999999999999999999886
No 51
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=373.68 Aligned_cols=262 Identities=25% Similarity=0.437 Sum_probs=211.8
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeec
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYM 938 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 938 (1176)
++|.+.+.||+|+||+||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 46888999999999999999986 58999999986655556678999999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccccc
Q 046275 939 RYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDT 1018 (1176)
Q Consensus 939 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 1018 (1176)
++|+|.++++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 163 (310)
T 3s95_A 90 KGGTLRGIIKSMD---SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163 (310)
T ss_dssp TTCBHHHHHHHCC---TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred CCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence 9999999998643 2689999999999999999999999 999999999999999999999999999987643322
Q ss_pred cc------------cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccc
Q 046275 1019 HL------------SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLK 1086 (1176)
Q Consensus 1019 ~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 1086 (1176)
.. ......||+.|+|||++.+..++.++||||||+++|||++|..||.....................
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T 3s95_A 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY 243 (310)
T ss_dssp ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT
T ss_pred cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc
Confidence 11 112457999999999999999999999999999999999999998654322111000000000001
Q ss_pred cccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1087 ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1087 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
.....+. .+.+++.+||+.||++|||++++++.|++++...
T Consensus 244 --------~~~~~~~------~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 244 --------CPPNCPP------SFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp --------CCTTCCT------THHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --------CCCCCCH------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 1111121 2456999999999999999999999999997653
No 52
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=7.1e-39 Score=363.59 Aligned_cols=283 Identities=38% Similarity=0.635 Sum_probs=226.9
Q ss_pred ccccCHHHHHHHhcCCCCC------ceEeEeCceEEEEEEECCCCEEEEEEeeccC----CcCHHHHHHHHHHHHhcCCC
Q 046275 847 LRKLTFADLLEATNGFHND------SLIGSGGFGDVYKAKLKDGSTVAIKKLIHIS----GQGDREFTAEMETIGKIKHR 916 (1176)
Q Consensus 847 ~~~~~~~~~~~~~~~y~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~ 916 (1176)
...+++.++..++++|... +.||+|+||.||+|+. +++.||+|++.... ....+.+.+|+.++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4568899999999998877 8999999999999987 58999999986432 22346788999999999999
Q ss_pred CcccceeEEeeCCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE
Q 046275 917 NLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL 996 (1176)
Q Consensus 917 niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll 996 (1176)
||+++++++.+.+..++||||+++|+|.+++..... ..++++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 999999999999999999999999999999976432 23689999999999999999999999 99999999999999
Q ss_pred CCCCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHH
Q 046275 997 DENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLV 1076 (1176)
Q Consensus 997 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~ 1076 (1176)
+.++.+||+|||+++...............||+.|+|||++.+ .++.++||||||+++|+|++|+.||...... ....
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~ 244 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLL 244 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS-SBTT
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch-HHHH
Confidence 9999999999999987654333333345679999999999876 5789999999999999999999999765432 2222
Q ss_pred HHHHHhhc--cccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhh
Q 046275 1077 GWVKQHAK--LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 1139 (1176)
Q Consensus 1077 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~ 1139 (1176)
.+...... ..+.+.+++.+.... ......+.+++.+||+.||.+|||+++++++|+++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMNDAD---STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCSCCC---HHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhccccccccc---hHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 33322211 112222333332211 2234456779999999999999999999999999875
No 53
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2e-39 Score=370.24 Aligned_cols=248 Identities=24% Similarity=0.370 Sum_probs=206.4
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
.++|++.+.||+|+||.||+|++. +|+.||+|++..... ...+.+.+|+++++.++||||+++++++...+..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 457999999999999999999985 799999999865422 23456889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+++|+|.+++...+ ++++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 94 e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 9999999999998764 689999999999999999999999 999999999999999999999999999986643
Q ss_pred ccccccccccccCCcccCccccCCCCCC-chhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRCS-TKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
.. .....+||+.|+|||++.+..++ .++||||+||++|+|++|+.||...+ .............. ++
T Consensus 167 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~~--~p-- 234 (328)
T 3fe3_A 167 GG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRERVLRGKYR--IP-- 234 (328)
T ss_dssp SC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC--CC--
T ss_pred CC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCC--CC--
Confidence 32 23556899999999999887765 79999999999999999999996543 23333333222211 11
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+ ..+.+++.+||+.||.+|||++|++++
T Consensus 235 --~~~s------~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 235 --FYMS------TDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp --TTSC------HHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred --CCCC------HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111 135569999999999999999999986
No 54
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.8e-39 Score=377.74 Aligned_cols=263 Identities=25% Similarity=0.377 Sum_probs=211.9
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC--------CCCEEEEEEeeccCC-cCHHHHHHHHHHHHhc-CCCCcccceeEEeeC
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK--------DGSTVAIKKLIHISG-QGDREFTAEMETIGKI-KHRNLVPLLGYCKVG 928 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 928 (1176)
.++|++.+.||+|+||+||+|++. ++..||||++..... ...+.+.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 357889999999999999999863 345799998864322 2345688999999999 899999999999999
Q ss_pred CeeEEEEeeccCCCHHHHHhhcccc------------CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE
Q 046275 929 EERLLVYEYMRYGSLEDVLHNQKKV------------GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL 996 (1176)
Q Consensus 929 ~~~~lV~E~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll 996 (1176)
+..|+||||+++|+|.+++...+.. ...+++.+++.++.||+.||+|||+. +|+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 9999999999999999999875421 23589999999999999999999999 99999999999999
Q ss_pred CCCCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccH
Q 046275 997 DENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNL 1075 (1176)
Q Consensus 997 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~ 1075 (1176)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~--~~ 314 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--EL 314 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HH
Confidence 9999999999999987654433333344567889999999999999999999999999999999 99999764321 12
Q ss_pred HHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1076 VGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1076 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
... ...... +......+ ..+.+++.+||+.||++|||+.|++++|+++...
T Consensus 315 ~~~---~~~~~~-----~~~~~~~~------~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 315 FKL---LKEGHR-----MDKPANCT------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp HHH---HHTTCC-----CCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHH---HhcCCC-----CCCCCCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 221 111111 11111111 1355699999999999999999999999998753
No 55
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.7e-39 Score=364.72 Aligned_cols=263 Identities=30% Similarity=0.494 Sum_probs=201.8
Q ss_pred hcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCc--CHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQ--GDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
.++|++.+.||+|+||+||+|++ +|+.||||++...... ..+.+.+|++++++++||||+++++++......++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 45789999999999999999987 4889999998654322 23568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPH--IIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|+++|+|.+++..... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++...
T Consensus 115 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp CCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred cCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 9999999999986532 12489999999999999999999999 7 9999999999999999999999999997543
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+ .............. ..
T Consensus 191 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~-----~~~~~~~~~~~~~~----~~ 259 (309)
T 3p86_A 191 STF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN-----PAQVVAAVGFKCKR----LE 259 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC-----HHHHHHHHHHSCCC----CC
T ss_pred ccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcCCC----CC
Confidence 321 12245679999999999999999999999999999999999999997543 11122111111110 11
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCC
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 1143 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~ 1143 (1176)
.....+ ..+.+++.+||+.||++|||++++++.|+.+.+....
T Consensus 260 ~~~~~~------~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 260 IPRNLN------PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp CCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred CCccCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 111111 1355699999999999999999999999999866433
No 56
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=371.82 Aligned_cols=251 Identities=24% Similarity=0.365 Sum_probs=198.9
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC-CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS-GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
..++|++.+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 4578999999999999999999985 79999999986533 223456889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+++|+|.+++...+ ++++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 88 E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD----RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp ECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 9999999999997664 689999999999999999999999 999999999999999999999999999876543
Q ss_pred ccccccccccccCCcccCccccCCCCC-CchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRC-STKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
... .......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||...+ .............. ++
T Consensus 161 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~~~~--~p-- 230 (347)
T 3zgw_A 161 NKD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-----VMALYKKIMRGKYD--VP-- 230 (347)
T ss_dssp ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCC--CC--
T ss_pred CCC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCCCC--CC--
Confidence 222 22345679999999999988775 889999999999999999999996532 23333333222211 11
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+ ..+.+++.+||+.||++|||++|++++
T Consensus 231 --~~~s------~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 231 --KWLS------PSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp --TTCC------HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --CCCC------HHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1111 134569999999999999999999987
No 57
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.9e-38 Score=361.95 Aligned_cols=262 Identities=25% Similarity=0.326 Sum_probs=214.0
Q ss_pred cccCHHHHHHHhcC----------CCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCC
Q 046275 848 RKLTFADLLEATNG----------FHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHR 916 (1176)
Q Consensus 848 ~~~~~~~~~~~~~~----------y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 916 (1176)
..++++++..+++. |...+.||+|+||.||+|++. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34677777777654 667789999999999999987 6999999999766666677899999999999999
Q ss_pred CcccceeEEeeCCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE
Q 046275 917 NLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL 996 (1176)
Q Consensus 917 niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll 996 (1176)
||+++++++...+..++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll 174 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILL 174 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEE
Confidence 9999999999999999999999999999998753 589999999999999999999999 99999999999999
Q ss_pred CCCCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHH
Q 046275 997 DENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLV 1076 (1176)
Q Consensus 997 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~ 1076 (1176)
+.++.+||+|||++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||.... ..
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~-----~~ 247 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS-----PV 247 (321)
T ss_dssp CTTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HH
T ss_pred CCCCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HH
Confidence 9999999999999986654322 1245679999999999999999999999999999999999999996532 12
Q ss_pred HHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1077 GWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1077 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
................ ....+ ..+.+++.+||+.||++|||+++++++
T Consensus 248 ~~~~~~~~~~~~~~~~---~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 248 QAMKRLRDSPPPKLKN---SHKVS------PVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHHHSSCCCCTT---GGGSC------HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHhcCCCCCcCc---cccCC------HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2222222211111000 00111 135569999999999999999999986
No 58
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.3e-39 Score=369.95 Aligned_cols=270 Identities=27% Similarity=0.326 Sum_probs=210.0
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCC----eeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGE----ERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lV~ 935 (1176)
++|++.+.||+|+||+||+|++. ++.||||++.... .......+|+.++++++||||+++++++.... ..++||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 57889999999999999999986 8999999985432 23345667899999999999999999998744 469999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcC-------CCCeeeCCCCCCCEEECCCCcEEEEeec
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNC-------IPHIIHRDMKSSNVLLDENFEARVSDFG 1008 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-------~~~ivH~Dlkp~NIll~~~~~~kl~DfG 1008 (1176)
||+++|+|.++++.. .+++..++.++.|++.||+|||+.. .++|+||||||+||+++.++.+||+|||
T Consensus 102 e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 102 AFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp ECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence 999999999999764 4899999999999999999999861 2379999999999999999999999999
Q ss_pred cccccccccccccccccccCCcccCccccCC-----CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCc----------
Q 046275 1009 MARLMSAMDTHLSVSTLAGTPGYVPPEYYQS-----FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN---------- 1073 (1176)
Q Consensus 1009 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~---------- 1073 (1176)
+++...............||+.|+|||++.+ ..++.++|||||||++|||+||+.||........
T Consensus 177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 256 (322)
T 3soc_A 177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH 256 (322)
T ss_dssp TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence 9987655443333345679999999999976 3566789999999999999999999976543211
Q ss_pred -cHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1074 -NLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1074 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
....+......... .+.+....+ .......+.+++.+||+.||++|||++|+++.|+++++..
T Consensus 257 ~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 257 PSLEDMQEVVVHKKK----RPVLRDYWQ-KHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp CCHHHHHHHHTTSCC----CCCCCGGGG-SSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CchhhhhhhhhcccC----CCCcccccc-ccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 11122221111111 111111111 1113345778999999999999999999999999998653
No 59
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.7e-39 Score=370.88 Aligned_cols=254 Identities=24% Similarity=0.361 Sum_probs=205.1
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
.++|++.+.||+|+||+||+|++. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+++..|+|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 357999999999999999999987 789999999854332 223568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAM 1016 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 1016 (1176)
|+++|+|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 86 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred cCCCCcHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 999999999987554 589999999999999999999999 9999999999999999999999999999866543
Q ss_pred cccccccccccCCcccCccccCCCCC-CchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCccc
Q 046275 1017 DTHLSVSTLAGTPGYVPPEYYQSFRC-STKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPEL 1095 (1176)
Q Consensus 1017 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1095 (1176)
..........||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.........+..+.... .. .++
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~---~~---~~~-- 230 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK---TY---LNP-- 230 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC---TT---STT--
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc---cc---CCc--
Confidence 33333356689999999999977665 7789999999999999999999976553333222222111 10 010
Q ss_pred ccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1096 MKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1096 ~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
+...+ ..+.+++.+||+.||++|||++|++++
T Consensus 231 ~~~~~------~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 WKKID------SAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GGGSC------HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCC------HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11111 134569999999999999999999876
No 60
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.5e-38 Score=379.47 Aligned_cols=308 Identities=20% Similarity=0.193 Sum_probs=193.1
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEE
Q 046275 301 SSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLD 380 (1176)
Q Consensus 301 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 380 (1176)
++|++|++++|++++. + ++++++|++|++++|+++ .+| +..+++|++|++++|.+++. .++++++|++|+
T Consensus 85 ~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~-~l~---~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~ 154 (457)
T 3bz5_A 85 TNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLT-KLD---VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELD 154 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCS-CCC---CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEE
T ss_pred CCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCC-eec---CCCCCcCCEEECCCCcccee---ccccCCcCCEEE
Confidence 3444444444444432 2 445555555555555554 233 34455555555555555542 144555555555
Q ss_pred ccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccc
Q 046275 381 LSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQL 460 (1176)
Q Consensus 381 Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 460 (1176)
+++|+..+.++ + ..+++|++|++++|++++ +| ++.+++|+.|++++|++++. .++.+++|+.|++++|++
T Consensus 155 l~~n~~~~~~~--~--~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l 224 (457)
T 3bz5_A 155 CHLNKKITKLD--V--TPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKL 224 (457)
T ss_dssp CTTCSCCCCCC--C--TTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCC
T ss_pred CCCCCcccccc--c--ccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcc
Confidence 55554333332 1 234555555555555554 23 55566666666666666643 256666666666666666
Q ss_pred cCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCC
Q 046275 461 HGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPEL 540 (1176)
Q Consensus 461 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 540 (1176)
++ +| ++.+++|++|++++|++++.. ++.+++|+.|++++| +|+.|++++|.+.|.+| +
T Consensus 225 ~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~ 282 (457)
T 3bz5_A 225 TE-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--A 282 (457)
T ss_dssp SC-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--C
T ss_pred cc-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--c
Confidence 65 44 666667777777777776543 345566666666655 34556677777666666 4
Q ss_pred CCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCcc
Q 046275 541 GDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNF 620 (1176)
Q Consensus 541 ~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 620 (1176)
+.|++|+.|++++|++.|.+|... ..+ ..
T Consensus 283 ~~l~~L~~L~Ls~n~~l~~l~~~~----~~L--------------------------------------~~--------- 311 (457)
T 3bz5_A 283 EGCRKIKELDVTHNTQLYLLDCQA----AGI--------------------------------------TE--------- 311 (457)
T ss_dssp TTCTTCCCCCCTTCTTCCEEECTT----CCC--------------------------------------SC---------
T ss_pred cccccCCEEECCCCcccceeccCC----Ccc--------------------------------------eE---------
Confidence 566777777777777666555210 000 00
Q ss_pred ccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccccC
Q 046275 621 TRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTI 700 (1176)
Q Consensus 621 ~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~i 700 (1176)
-.+.++.+|++|+|++|+|+| +| ++++++|+.|++++|+|+| ++.|+.|++++|+++|.
T Consensus 312 ---------L~l~~~~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~- 370 (457)
T 3bz5_A 312 ---------LDLSQNPKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE- 370 (457)
T ss_dssp ---------CCCTTCTTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-
T ss_pred ---------echhhcccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-
Confidence 012334578999999999998 44 9999999999999999996 34677789999999987
Q ss_pred CCCccccccccccccccccccCCCCC
Q 046275 701 PSSMSSLTLLNEIDLCNNQLTGMIPV 726 (1176)
Q Consensus 701 P~~l~~l~~L~~l~ls~N~l~g~~p~ 726 (1176)
.++..|..+++++|+|+|.||.
T Consensus 371 ----~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 371 ----GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp ----EEEEECCCBCCBTTBEEEECCT
T ss_pred ----ceeeecCccccccCcEEEEcCh
Confidence 4778899999999999999996
No 61
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.2e-38 Score=368.05 Aligned_cols=252 Identities=22% Similarity=0.311 Sum_probs=208.0
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc------CHHHHHHHHHHHHhcCCCCcccceeEEeeCCee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ------GDREFTAEMETIGKIKHRNLVPLLGYCKVGEER 931 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 931 (1176)
.++|.+.+.||+|+||.||+|+++ +|+.||+|.+...... ..+.+.+|+.++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 457999999999999999999987 6899999998654322 246789999999999999999999999999999
Q ss_pred EEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCC----cEEEEee
Q 046275 932 LLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENF----EARVSDF 1007 (1176)
Q Consensus 932 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Df 1007 (1176)
|+||||+++|+|.+++...+ .+++..+..++.||+.||.|||+. +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 99999999999999997654 689999999999999999999999 999999999999998876 7999999
Q ss_pred ccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccc
Q 046275 1008 GMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKI 1087 (1176)
Q Consensus 1008 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 1087 (1176)
|++....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...+ .......+.....
T Consensus 164 G~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~-----~~~~~~~i~~~~~ 235 (361)
T 2yab_A 164 GLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQETLANITAVSY 235 (361)
T ss_dssp SSCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHTTCC
T ss_pred CCceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcCC
Confidence 9998765432 2245679999999999999999999999999999999999999996543 2222222222211
Q ss_pred ccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1088 SDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1088 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.+++..+...+. .+.+++.+||+.||++|||+.|+++|
T Consensus 236 --~~~~~~~~~~s~------~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 236 --DFDEEFFSQTSE------LAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp --CCCHHHHTTSCH------HHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --CCCchhccCCCH------HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 122222222222 35679999999999999999999864
No 62
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=9.5e-39 Score=359.82 Aligned_cols=265 Identities=22% Similarity=0.347 Sum_probs=208.1
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcC---HHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQG---DREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
.++|++.+.||+|+||.||+|++. +++.||+|++....... .+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 357999999999999999999986 68999999986543333 35688999999999999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+++|+|.+++...+ ++++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999999999998764 689999999999999999999999 99999999999999999999999999998664
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
.... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .............. .....
T Consensus 163 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-----~~~~~~~~~~~~~~-~~~~~ 235 (294)
T 4eqm_A 163 ETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET-----AVSIAIKHIQDSVP-NVTTD 235 (294)
T ss_dssp -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC-----HHHHHHHHHSSCCC-CHHHH
T ss_pred cccc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHhhccCC-Ccchh
Confidence 3222 12244579999999999999999999999999999999999999996543 11111111111111 01111
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHHHhhCCCC
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRP-TMIQVMAMFKEIQAGSGL 1143 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RP-t~~evl~~L~~i~~~~~~ 1143 (1176)
.....|. .+.+++.+||+.||++|| +++++.+.|+++......
T Consensus 236 ~~~~~~~------~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 236 VRKDIPQ------SLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp SCTTSCH------HHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred cccCCCH------HHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 1122221 355699999999999999 999999999988655443
No 63
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.8e-39 Score=358.36 Aligned_cols=257 Identities=28% Similarity=0.405 Sum_probs=211.7
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeecc
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMR 939 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 939 (1176)
++|++.+.||+|+||+||+|++.+++.||+|++... ....+++.+|++++++++||||+++++++.++...++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccc-ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 468889999999999999999988999999998643 3345779999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccccc
Q 046275 940 YGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTH 1019 (1176)
Q Consensus 940 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 1019 (1176)
+|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 89 ~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 161 (269)
T 4hcu_A 89 HGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY- 161 (269)
T ss_dssp TCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH-
T ss_pred CCcHHHHHHhcC---cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccc-
Confidence 999999997653 2589999999999999999999999 999999999999999999999999999986643221
Q ss_pred ccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCcccccC
Q 046275 1020 LSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKE 1098 (1176)
Q Consensus 1020 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1176)
.......+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||.... ............ .+.....
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~-----~~~~~~~~~~~~-----~~~~~~~ 231 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-----NSEVVEDISTGF-----RLYKPRL 231 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTTC-----CCCCCTT
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC-----HHHHHHHHhcCc-----cCCCCCc
Confidence 12234567888999999998899999999999999999999 999987543 122222222111 1111111
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1099 DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1099 ~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
.+ ..+.+++.+||+.||++|||+++++++|+++...
T Consensus 232 ~~------~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 232 AS------THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp SC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CC------HHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 11 1355699999999999999999999999999764
No 64
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.1e-38 Score=365.03 Aligned_cols=248 Identities=23% Similarity=0.323 Sum_probs=206.1
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|++.+.||+|+||+||+|+.+ +|+.||+|++.+. .....+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57889999999999999999987 6899999998653 3344567889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+++|+|.+++...+ .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 85 E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 85 EYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp ECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 9999999999998654 689999999999999999999999 999999999999999999999999999975432
Q ss_pred ccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCccc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPEL 1095 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1095 (1176)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...+ .............. ++
T Consensus 158 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~~~~--~p--- 225 (337)
T 1o6l_A 158 DG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HERLFELILMEEIR--FP--- 225 (337)
T ss_dssp TT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC--CC---
T ss_pred CC--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCCC--CC---
Confidence 22 12345689999999999999999999999999999999999999996543 22222222222110 11
Q ss_pred ccCCCchHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 046275 1096 MKEDPNIEIELLQHLHVASACLDDRPWRRP-----TMIQVMAM 1133 (1176)
Q Consensus 1096 ~~~~~~~~~~~~~~~~li~~cl~~dp~~RP-----t~~evl~~ 1133 (1176)
...+ ..+.+++.+||+.||++|| +++|+++|
T Consensus 226 -~~~s------~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 -RTLS------PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -TTSC------HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -CCCC------HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1111 1355699999999999999 89999876
No 65
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=367.25 Aligned_cols=262 Identities=25% Similarity=0.384 Sum_probs=208.2
Q ss_pred cCCCCCceEeEeCceEEEEEEEC----CCCEEEEEEeeccC-CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK----DGSTVAIKKLIHIS-GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
++|.+.+.||+|+||.||+|++. .+..||||++.... ....+.+.+|+.++++++||||+++++++.+....++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 57889999999999999999985 34569999986532 23345689999999999999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+++|+|.++++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 129 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHD---GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred eeCCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 99999999999997553 2689999999999999999999999 99999999999999999999999999998765
Q ss_pred ccccc-ccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1015 AMDTH-LSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1015 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
..... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.... ............ .
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-----~~~~~~~~~~~~-----~ 272 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT-----NRDVISSVEEGY-----R 272 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC-----HHHHHHHHHTTC-----C
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC-----HHHHHHHHHcCC-----C
Confidence 43221 12233456788999999998899999999999999999999 999986543 112222221111 1
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCC
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 1143 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~ 1143 (1176)
.......+ ..+.+++.+||+.||++|||+.++++.|+++....+.
T Consensus 273 ~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 273 LPAPMGCP------HALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred CCCCCCcC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 11111111 1355699999999999999999999999999876543
No 66
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=8.8e-39 Score=355.19 Aligned_cols=258 Identities=27% Similarity=0.424 Sum_probs=211.2
Q ss_pred hcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeec
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYM 938 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 938 (1176)
.++|++.+.||+|+||.||+|+++++..||+|++... ....+++.+|++++++++||||+++++++.++...++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG-SMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBT-TBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccC-CCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 3578899999999999999999998889999988643 334577999999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccccc
Q 046275 939 RYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDT 1018 (1176)
Q Consensus 939 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 1018 (1176)
++|+|.+++...+ ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 86 SNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp TTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred CCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 9999999998754 2589999999999999999999999 999999999999999999999999999986654322
Q ss_pred cccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCccccc
Q 046275 1019 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMK 1097 (1176)
Q Consensus 1019 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1176)
. ......+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||..... ........... ....+..
T Consensus 160 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~~~--~~~~~~~-- 229 (268)
T 3sxs_A 160 V-SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-----SEVVLKVSQGH--RLYRPHL-- 229 (268)
T ss_dssp E-ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHHHHHHHTTC--CCCCCTT--
T ss_pred h-cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh-----HHHHHHHHcCC--CCCCCCc--
Confidence 2 2234456788999999998889999999999999999999 9999865431 11221111111 0111111
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1098 EDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1098 ~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
.+ ..+.+++.+||+.||++|||+++++++|++++..
T Consensus 230 -~~------~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 230 -AS------DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp -SC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred -Ch------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 11 1355699999999999999999999999998754
No 67
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.4e-39 Score=377.93 Aligned_cols=259 Identities=23% Similarity=0.348 Sum_probs=208.1
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
++|.+.+.||+|+||.||+|+++ +++.||||.+..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 56888999999999999999987 689999998864322 2234588999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD 1017 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 1017 (1176)
+++|+|.++++..+ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 194 ~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 194 VQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp CTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred CCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 99999999998653 2589999999999999999999999 99999999999999999999999999998644322
Q ss_pred ccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCcccc
Q 046275 1018 THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELM 1096 (1176)
Q Consensus 1018 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1176)
.........+++.|+|||++.+..++.++|||||||++|||++ |+.||.... ............ .....
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~-----~~~~~~~~~~~~-----~~~~~ 337 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS-----NQQTREFVEKGG-----RLPCP 337 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC-----HHHHHHHHHTTC-----CCCCC
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCC-----CCCCC
Confidence 1111122345778999999998889999999999999999998 999986543 111111111111 01111
Q ss_pred cCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1097 KEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1097 ~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
...|. .+.+++.+||+.||++|||++++++.|+++++.
T Consensus 338 ~~~~~------~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 338 ELCPD------AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp TTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCH------HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 11221 355699999999999999999999999998753
No 68
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=373.53 Aligned_cols=271 Identities=25% Similarity=0.350 Sum_probs=216.3
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC--------CCCEEEEEEeeccCC-cCHHHHHHHHHHHHhc-CCCCcccceeEEeeC
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK--------DGSTVAIKKLIHISG-QGDREFTAEMETIGKI-KHRNLVPLLGYCKVG 928 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 928 (1176)
.++|.+.+.||+|+||+||+|++. .+..||+|++..... ...+.+.+|+++++++ +||||+++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 357889999999999999999863 235799998865322 2235688999999999 999999999999999
Q ss_pred CeeEEEEeeccCCCHHHHHhhcccc------------CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE
Q 046275 929 EERLLVYEYMRYGSLEDVLHNQKKV------------GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL 996 (1176)
Q Consensus 929 ~~~~lV~E~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll 996 (1176)
+..++||||+++|+|.+++...... ...+++.+++.++.|++.||+|||+. +|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 9999999999999999999876421 23589999999999999999999999 99999999999999
Q ss_pred CCCCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccH
Q 046275 997 DENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNL 1075 (1176)
Q Consensus 997 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~ 1075 (1176)
+.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||.... .
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~-----~ 299 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-----V 299 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----H
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-----H
Confidence 9999999999999987655443333345567899999999999999999999999999999999 999986543 2
Q ss_pred HHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCCCCCc
Q 046275 1076 VGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQST 1148 (1176)
Q Consensus 1076 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~~~~~ 1148 (1176)
............. ......+ ..+.+++.+||+.||++|||++|++++|+++.+.........
T Consensus 300 ~~~~~~~~~~~~~-----~~~~~~~------~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~ 361 (382)
T 3tt0_A 300 EELFKLLKEGHRM-----DKPSNCT------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGY 361 (382)
T ss_dssp HHHHHHHHTTCCC-----CCCSSCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC---
T ss_pred HHHHHHHHcCCCC-----CCCccCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCC
Confidence 2222222222111 1111111 135569999999999999999999999999987665444333
No 69
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.7e-38 Score=359.97 Aligned_cols=262 Identities=29% Similarity=0.443 Sum_probs=201.6
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
++|.+.+.||+|+||.||+|++. ..+|+|.+..... ...+.+.+|+.++++++||||+++++++. .+..++||||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~ 112 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQW 112 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEec
Confidence 57899999999999999999864 4688887754322 23456889999999999999999999875 4568999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD 1017 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 1017 (1176)
+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 113 ~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~ 186 (307)
T 3lb7_A 113 CEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-----
T ss_pred CCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccccc
Confidence 99999999997553 3689999999999999999999999 99999999999999999999999999998654433
Q ss_pred ccccccccccCCcccCccccC---CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1018 THLSVSTLAGTPGYVPPEYYQ---SFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1018 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
.........||+.|+|||++. +..++.++|||||||++|||++|+.||...... ................ +.
T Consensus 187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~----~~~~~~~~~~~~~~~~-~~ 261 (307)
T 3lb7_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR----DQIIFMVGRGYASPDL-SK 261 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH----HHHHHHHHHTCCCCCS-TT
T ss_pred ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH----HHHHHHHhcCCCCcch-hh
Confidence 333334567999999999985 667889999999999999999999999754321 1111111111111101 11
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
+....+ ..+.+++.+||+.||++|||+.+++++++.+....
T Consensus 262 ~~~~~~------~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 262 LYKNCP------KAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp SCSSSC------HHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred hhcCCc------HHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 111222 13556999999999999999999999999998664
No 70
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.3e-39 Score=375.04 Aligned_cols=270 Identities=22% Similarity=0.369 Sum_probs=212.8
Q ss_pred HHHHHHHhcCCCCCceEeEeCceEEEEEEEC------CCCEEEEEEeeccCC-cCHHHHHHHHHHHHhc-CCCCccccee
Q 046275 852 FADLLEATNGFHNDSLIGSGGFGDVYKAKLK------DGSTVAIKKLIHISG-QGDREFTAEMETIGKI-KHRNLVPLLG 923 (1176)
Q Consensus 852 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~ 923 (1176)
..+.....++|.+.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+++++++ +||||+++++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~ 93 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 93 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeee
Confidence 3344455678999999999999999999842 457899999865332 2235689999999999 7999999999
Q ss_pred EEeeCCe-eEEEEeeccCCCHHHHHhhcccc-------------------------------------------------
Q 046275 924 YCKVGEE-RLLVYEYMRYGSLEDVLHNQKKV------------------------------------------------- 953 (1176)
Q Consensus 924 ~~~~~~~-~~lV~E~~~~gsL~~~l~~~~~~------------------------------------------------- 953 (1176)
++.+.+. .++||||+++|+|.++++.....
T Consensus 94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (359)
T 3vhe_A 94 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSL 173 (359)
T ss_dssp EECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------
T ss_pred eeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccccc
Confidence 9877554 89999999999999999865421
Q ss_pred -------------CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccccccc
Q 046275 954 -------------GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHL 1020 (1176)
Q Consensus 954 -------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 1020 (1176)
...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 250 (359)
T 3vhe_A 174 SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 250 (359)
T ss_dssp ----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCE
T ss_pred chhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccch
Confidence 11289999999999999999999999 99999999999999999999999999998665443333
Q ss_pred cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCcccccCC
Q 046275 1021 SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKED 1099 (1176)
Q Consensus 1021 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1099 (1176)
......||+.|+|||++.+..++.++|||||||++|||++ |+.||....... .............. ....
T Consensus 251 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~~~--------~~~~ 321 (359)
T 3vhe_A 251 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRA--------PDYT 321 (359)
T ss_dssp EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHHTCCCCC--------CTTC
T ss_pred hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHcCCCCCC--------CCCC
Confidence 3455678999999999999899999999999999999998 999997654221 11111111111111 1111
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhh
Q 046275 1100 PNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 1139 (1176)
Q Consensus 1100 ~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~ 1139 (1176)
+ ..+.+++.+||+.||++|||++|++++|+++..
T Consensus 322 ~------~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 322 T------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp C------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C------HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 1 135569999999999999999999999999874
No 71
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3e-38 Score=357.30 Aligned_cols=262 Identities=23% Similarity=0.368 Sum_probs=204.4
Q ss_pred hcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHh--cCCCCcccceeEEee----CCeeE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGK--IKHRNLVPLLGYCKV----GEERL 932 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~~ 932 (1176)
.++|++.+.||+|+||+||+|++ +++.||||++.. ...+.+.+|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc---ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 45799999999999999999998 589999999853 334556677777776 799999999998654 34579
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHH--------hcCCCCeeeCCCCCCCEEECCCCcEEE
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLH--------HNCIPHIIHRDMKSSNVLLDENFEARV 1004 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~~kl 1004 (1176)
+||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+||
T Consensus 83 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl 154 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCI 154 (301)
T ss_dssp EEECCCTTCBHHHHHTTC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEE
T ss_pred EehhhccCCCHHHHHhhc-----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEE
Confidence 999999999999999643 5899999999999999999999 76 9999999999999999999999
Q ss_pred Eeeccccccccccccc--cccccccCCcccCccccCCC------CCCchhhhHHHHHHHHHHHcC----------CCCCC
Q 046275 1005 SDFGMARLMSAMDTHL--SVSTLAGTPGYVPPEYYQSF------RCSTKGDVYSYGVVLLELLTG----------KRPTD 1066 (1176)
Q Consensus 1005 ~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg----------~~P~~ 1066 (1176)
+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||.
T Consensus 155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~ 234 (301)
T 3q4u_A 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234 (301)
T ss_dssp CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence 9999997654433221 12345799999999999876 455799999999999999999 88886
Q ss_pred CCCCCCccHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 046275 1067 SADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 1137 (1176)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i 1137 (1176)
........................+++... .......+.+++.+||+.||++|||++++++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 235 DVVPNDPSFEDMRKVVCVDQQRPNIPNRWF-----SDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCCCGGGG-----GSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCCcchhhhhHHHhccCCCCCCChhhc-----cCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 654343333333332222211111111111 112334567899999999999999999999999976
No 72
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.6e-38 Score=358.47 Aligned_cols=265 Identities=23% Similarity=0.407 Sum_probs=204.6
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-----CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEee--CCeeE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-----DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKV--GEERL 932 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 932 (1176)
++|++.+.||+|+||+||+|++. +++.||||++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 56889999999999999999852 588999999876555555678999999999999999999999854 35589
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccc
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1012 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 1012 (1176)
+||||+++|+|.+++...+. .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 90 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp EEEECCTTCBHHHHHHHCGG---GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred EEEEeCCCCCHHHHHHhccc---ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 99999999999999987642 589999999999999999999999 999999999999999999999999999987
Q ss_pred cccccccc-cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC---------CCccH-H-HHHH
Q 046275 1013 MSAMDTHL-SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADF---------GDNNL-V-GWVK 1080 (1176)
Q Consensus 1013 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~---------~~~~~-~-~~~~ 1080 (1176)
........ ......+++.|+|||++.+..++.++||||||+++|||++|..||..... ..... . ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 243 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence 65432221 12344577889999999988999999999999999999999999864210 00000 0 0001
Q ss_pred HhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1081 QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1081 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
...... ........+ ..+.+++.+||+.||++|||++|+++.|++++...
T Consensus 244 ~~~~~~-----~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 244 LLKNNG-----RLPRPDGCP------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHTTC-----CCCCCTTCC------HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHhccC-----cCCCCcCcC------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 111110 111111112 24566999999999999999999999999998654
No 73
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-37 Score=371.62 Aligned_cols=360 Identities=23% Similarity=0.236 Sum_probs=211.4
Q ss_pred cccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCcccccccCCCCCccceeeccCCcccccCCCccCCCCC
Q 046275 164 AGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGDINVSKCKNLQFLDVSSNNFSMAVPSFGDCLAL 243 (1176)
Q Consensus 164 ~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L 243 (1176)
.+..+++|++||+++|.+++. | .|..+++|++|+|++|.+++. ++..+++|++|++++|++++++ ++.+++|
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~~---~--~l~~l~~L~~L~Ls~n~l~~~-~~~~l~~L~~L~Ls~N~l~~~~--~~~l~~L 108 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITDM---T--GIEKLTGLTKLICTSNNITTL-DLSQNTNLTYLACDSNKLTNLD--VTPLTKL 108 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCCC---T--TGGGCTTCSEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSCCC--CTTCTTC
T ss_pred ChhHcCCCCEEEccCCCcccC---h--hhcccCCCCEEEccCCcCCeE-ccccCCCCCEEECcCCCCceee--cCCCCcC
Confidence 344556777777777777653 2 244555555555555555543 2444455555555555544432 4444445
Q ss_pred cEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccccC
Q 046275 244 EYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGS 323 (1176)
Q Consensus 244 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 323 (1176)
++|++++|++++. + ++.++ +|++|++++|++++. + ++.
T Consensus 109 ~~L~L~~N~l~~l-~--~~~l~------------------------------------~L~~L~l~~N~l~~l-~--l~~ 146 (457)
T 3bz5_A 109 TYLNCDTNKLTKL-D--VSQNP------------------------------------LLTYLNCARNTLTEI-D--VSH 146 (457)
T ss_dssp CEEECCSSCCSCC-C--CTTCT------------------------------------TCCEEECTTSCCSCC-C--CTT
T ss_pred CEEECCCCcCCee-c--CCCCC------------------------------------cCCEEECCCCcccee-c--ccc
Confidence 5555555544432 1 44444 444444444444432 1 445
Q ss_pred CCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCcc
Q 046275 324 CSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLK 403 (1176)
Q Consensus 324 l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~ 403 (1176)
+++|++|++++|+..+.++ +..+++|++|++++|++++ +| +..+++|+.|++++|++++. + + ..+++|+
T Consensus 147 l~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~--l--~~l~~L~ 215 (457)
T 3bz5_A 147 NTQLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D--L--NQNIQLT 215 (457)
T ss_dssp CTTCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C--C--TTCTTCS
T ss_pred CCcCCEEECCCCCcccccc---cccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-c--c--ccCCCCC
Confidence 5555555555553333442 3445555555555555554 22 45555555555555555532 1 1 2345566
Q ss_pred EEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeeccccc
Q 046275 404 ELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNE 483 (1176)
Q Consensus 404 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 483 (1176)
+|+|++|++++ +| ++.+++|+.|++++|++++.. ++.+++|+.|+++.| +|+.|++++|.
T Consensus 216 ~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~ 275 (457)
T 3bz5_A 216 FLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNT 275 (457)
T ss_dssp EEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCT
T ss_pred EEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCc
Confidence 66666666654 34 556666777777777766532 345566666666554 34566777777
Q ss_pred ccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChh
Q 046275 484 LTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPA 563 (1176)
Q Consensus 484 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~ 563 (1176)
+.+.+| ++++++|+.|++++|.+.+.+|. ..++|+.|++++| ++|+.|++++|+++| +|
T Consensus 276 ~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~-l~-- 334 (457)
T 3bz5_A 276 QLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTE-LD-- 334 (457)
T ss_dssp TCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSC-CC--
T ss_pred cCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCcccc-cc--
Confidence 766666 46677777777777777666663 3455666655555 577888888888775 21
Q ss_pred HHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEc
Q 046275 564 LFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDI 643 (1176)
Q Consensus 564 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdL 643 (1176)
+..+.+|+.||+
T Consensus 335 --------------------------------------------------------------------l~~l~~L~~L~l 346 (457)
T 3bz5_A 335 --------------------------------------------------------------------VSHNTKLKSLSC 346 (457)
T ss_dssp --------------------------------------------------------------------CTTCTTCSEEEC
T ss_pred --------------------------------------------------------------------cccCCcCcEEEC
Confidence 122346778888
Q ss_pred ccCcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCccc
Q 046275 644 SYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSS 706 (1176)
Q Consensus 644 s~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~ 706 (1176)
++|+|+| ++.|..|++++|+++|. +.+..|+.+||++|+|+|.||..+..
T Consensus 347 ~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~~ 396 (457)
T 3bz5_A 347 VNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLLD 396 (457)
T ss_dssp CSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCBC
T ss_pred CCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHhc
Confidence 8888886 24567778888888876 46677888899999999999887644
No 74
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=359.35 Aligned_cols=251 Identities=22% Similarity=0.321 Sum_probs=205.6
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc------CHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ------GDREFTAEMETIGKIKHRNLVPLLGYCKVGEERL 932 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 932 (1176)
++|.+.+.||+|+||.||+|+++ +|+.||+|.+...... ..+.+.+|+.++++++||||+++++++.+....+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46889999999999999999987 5899999998653322 3567899999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCC----cEEEEeec
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENF----EARVSDFG 1008 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~DfG 1008 (1176)
+||||+++|+|.+++...+ .+++..++.++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEcCCCCCHHHHHHhcC----CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 9999999999999997653 689999999999999999999999 999999999999999887 79999999
Q ss_pred cccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccc
Q 046275 1009 MARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKIS 1088 (1176)
Q Consensus 1009 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1088 (1176)
+++....... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||.... .............
T Consensus 164 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~~~~~~~- 234 (326)
T 2y0a_A 164 LAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQETLANVSAVNY- 234 (326)
T ss_dssp TCEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHHTCC-
T ss_pred CCeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC-----HHHHHHHHHhcCC-
Confidence 9987643222 245679999999999999999999999999999999999999996542 1122222111111
Q ss_pred cccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1089 DVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1089 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.+.+......+ ..+.+++.+||+.||++|||+.|++++
T Consensus 235 -~~~~~~~~~~~------~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 235 -EFEDEYFSNTS------ALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp -CCCHHHHTTSC------HHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred -CcCccccccCC------HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11111111122 235579999999999999999999985
No 75
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.7e-38 Score=365.29 Aligned_cols=255 Identities=22% Similarity=0.284 Sum_probs=206.9
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc-----CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI-----SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLL 933 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 933 (1176)
++|++.+.||+|+||+||+|+++ +|+.||||++... .....+.+.+|+.+++.++||||+++++++.+++..|+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 46999999999999999999986 6899999988532 12245779999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCc---EEEEeeccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFE---ARVSDFGMA 1010 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfGla 1010 (1176)
||||+++|+|.+++......+..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 9999999999998876654455689999999999999999999999 9999999999999986554 999999999
Q ss_pred cccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccc
Q 046275 1011 RLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDV 1090 (1176)
Q Consensus 1011 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1090 (1176)
+....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ............ .
T Consensus 181 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~i~~~~~--~ 250 (351)
T 3c0i_A 181 IQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK------ERLFEGIIKGKY--K 250 (351)
T ss_dssp EECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH------HHHHHHHHHTCC--C
T ss_pred eEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH------HHHHHHHHcCCC--C
Confidence 87654322 2245679999999999999999999999999999999999999996532 112222222211 1
Q ss_pred cCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1091 FDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1091 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.++..+...+ ..+.+++.+||+.||++|||+.|++++
T Consensus 251 ~~~~~~~~~s------~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 251 MNPRQWSHIS------ESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp CCHHHHTTSC------HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCccccccCC------HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1222222222 235679999999999999999999875
No 76
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=366.80 Aligned_cols=249 Identities=24% Similarity=0.344 Sum_probs=200.8
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCeeEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEERLL 933 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 933 (1176)
.++|++.+.||+|+||+||+|+++ +|+.||+|++.+. .....+.+.+|..+++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999987 5899999998643 223445678899999988 79999999999999999999
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
||||+++|+|.+++...+ .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 102 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 999999999999998764 689999999999999999999999 9999999999999999999999999999754
Q ss_pred ccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCc
Q 046275 1014 SAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDP 1093 (1176)
Q Consensus 1014 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1093 (1176)
.... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...+ .......+...... ++.
T Consensus 175 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~~~~--~p~ 245 (353)
T 3txo_A 175 ICNG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN-----EDDLFEAILNDEVV--YPT 245 (353)
T ss_dssp CC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC--CCT
T ss_pred ccCC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCCCC--CCC
Confidence 3222 22345689999999999999899999999999999999999999997543 22222322222211 111
Q ss_pred ccccCCCchHHHHHHHHHHHHHhccCCCCCCCCH------HHHHHH
Q 046275 1094 ELMKEDPNIEIELLQHLHVASACLDDRPWRRPTM------IQVMAM 1133 (1176)
Q Consensus 1094 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~------~evl~~ 1133 (1176)
. .+ ..+.+++.+||+.||++||++ +|+++|
T Consensus 246 ~----~~------~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 246 W----LH------EDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp T----SC------HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred C----CC------HHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 1 11 135569999999999999998 777764
No 77
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.7e-38 Score=367.23 Aligned_cols=253 Identities=23% Similarity=0.305 Sum_probs=201.6
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC---cCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCeeEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG---QGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 934 (1176)
++|++.++||+|+||+||+|+++ +++.||+|++.+... ...+.+.+|..++.++ +|||||++++++.+....|+|
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 57899999999999999999987 578899999875422 2234578899999887 899999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+++|+|.+++...+ .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|+...
T Consensus 132 ~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEcCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 99999999999998764 689999999999999999999999 99999999999999999999999999997532
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCC---c-cHHHHHHHhhccccccc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD---N-NLVGWVKQHAKLKISDV 1090 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~---~-~~~~~~~~~~~~~~~~~ 1090 (1176)
... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+ . .............. .
T Consensus 205 ~~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--~ 280 (396)
T 4dc2_A 205 RPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--R 280 (396)
T ss_dssp CTT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC--C
T ss_pred cCC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc--C
Confidence 221 22356789999999999999999999999999999999999999997543211 1 11111122222111 0
Q ss_pred cCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCH------HHHHHH
Q 046275 1091 FDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTM------IQVMAM 1133 (1176)
Q Consensus 1091 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~------~evl~~ 1133 (1176)
+++ ..+ ..+.+++.+||+.||++||++ +|+++|
T Consensus 281 ~p~----~~s------~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 281 IPR----SLS------VKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp CCT----TSC------HHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred CCC----cCC------HHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 111 111 135579999999999999995 566554
No 78
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=368.08 Aligned_cols=266 Identities=27% Similarity=0.439 Sum_probs=212.0
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC------CCCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCe
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK------DGSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEE 930 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 930 (1176)
..++|++.+.||+|+||.||+|++. +++.||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4578999999999999999999885 347899998865332 224568999999999999999999999999999
Q ss_pred eEEEEeeccCCCHHHHHhhcccc--------------------CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCC
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKV--------------------GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMK 990 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk 990 (1176)
.++||||+++|+|.+++...... ...+++.+++.++.|+++||+|||+. +|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 99999999999999999864311 14689999999999999999999999 99999999
Q ss_pred CCCEEECCCCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCC
Q 046275 991 SSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSAD 1069 (1176)
Q Consensus 991 p~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~ 1069 (1176)
|+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999987654333233345678999999999988899999999999999999999 999986543
Q ss_pred CCCccHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCC
Q 046275 1070 FGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSG 1142 (1176)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~ 1142 (1176)
.............. ......+ ..+.+++.+||+.||++|||+.+++++|+++....+
T Consensus 282 -----~~~~~~~~~~~~~~-----~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 282 -----HEEVIYYVRDGNIL-----ACPENCP------LELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp -----HHHHHHHHHTTCCC-----CCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred -----hHHHHHHHhCCCcC-----CCCCCCC------HHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 12222222222211 1111112 135569999999999999999999999999876543
No 79
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=366.84 Aligned_cols=249 Identities=24% Similarity=0.343 Sum_probs=203.2
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|.+.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.+++.++|||||++++++.+....|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46889999999999999999987 5889999998642 2344567889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+.+|+|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 95 e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV----HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCCTTEEHHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 9999999999998654 689999999999999999999999 999999999999999999999999999987643
Q ss_pred ccccccccccccCCcccCccccCC---CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQS---FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
.. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .............. .++
T Consensus 168 ~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~--~~~~~~~~~~~~~~--~~p 240 (384)
T 4fr4_A 168 ET---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST--SSKEIVHTFETTVV--TYP 240 (384)
T ss_dssp TC---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS--CHHHHHHHHHHCCC--CCC
T ss_pred CC---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc--cHHHHHHHHhhccc--CCC
Confidence 22 2356689999999999864 45899999999999999999999999754322 22222222222111 011
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCC-HHHHHH
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPT-MIQVMA 1132 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt-~~evl~ 1132 (1176)
. ..+ ..+.+++.+||+.||.+||+ ++++.+
T Consensus 241 ~----~~s------~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 241 S----AWS------QEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp T----TSC------HHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred C----cCC------HHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1 111 14566999999999999998 666654
No 80
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=9.7e-38 Score=356.23 Aligned_cols=271 Identities=22% Similarity=0.278 Sum_probs=211.8
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC-CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCC--eeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS-GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGE--ERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV~ 935 (1176)
++|.+.+.||+|+||+||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56889999999999999999987 48999999986533 234567889999999999999999999987765 779999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE----CCCCcEEEEeecccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL----DENFEARVSDFGMAR 1011 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfGla~ 1011 (1176)
||+++|+|.+++..... ...+++.+++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 89 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp ECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred eCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999987643 22489999999999999999999999 99999999999999 788889999999998
Q ss_pred ccccccccccccccccCCcccCccccC--------CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhh
Q 046275 1012 LMSAMDTHLSVSTLAGTPGYVPPEYYQ--------SFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHA 1083 (1176)
Q Consensus 1012 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~ 1083 (1176)
....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||........... ......
T Consensus 165 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~-~~~~~~ 240 (319)
T 4euu_A 165 ELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKE-VMYKII 240 (319)
T ss_dssp ECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHH-HHHHHH
T ss_pred ecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHH-HHHHHh
Confidence 7654332 23457999999999985 56789999999999999999999999976543222222 222211
Q ss_pred ccccccc-------------cCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHh
Q 046275 1084 KLKISDV-------------FDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 1138 (1176)
Q Consensus 1084 ~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~ 1138 (1176)
....... +.+...............+.+++.+||+.||++|||++|++++..+..
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 1111100 001111111122233445678999999999999999999999987654
No 81
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.7e-38 Score=361.76 Aligned_cols=263 Identities=25% Similarity=0.388 Sum_probs=212.1
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC------CCCEEEEEEeeccC-CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK------DGSTVAIKKLIHIS-GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEER 931 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 931 (1176)
.++|.+.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 457889999999999999999872 35789999886432 22345688999999999999999999999999999
Q ss_pred EEEEeeccCCCHHHHHhhcccc--------------------CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCC
Q 046275 932 LLVYEYMRYGSLEDVLHNQKKV--------------------GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKS 991 (1176)
Q Consensus 932 ~lV~E~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp 991 (1176)
++||||+++|+|.+++...... ...+++.+++.++.|+++||+|||+. +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 9999999999999999875431 13489999999999999999999999 999999999
Q ss_pred CCEEECCCCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCC
Q 046275 992 SNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADF 1070 (1176)
Q Consensus 992 ~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~ 1070 (1176)
+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987654443333345567889999999998889999999999999999999 9999976442
Q ss_pred CCccHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1071 GDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
........ .... +......+ ..+.+++.+||+.||++|||+.+++++|+++...
T Consensus 259 --~~~~~~~~---~~~~-----~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 259 --ERLFNLLK---TGHR-----MERPDNCS------EEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp --GGHHHHHH---TTCC-----CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred --HHHHHHhh---cCCc-----CCCCccCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 12222211 1111 11111111 1355699999999999999999999999998754
No 82
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.2e-38 Score=360.81 Aligned_cols=246 Identities=22% Similarity=0.352 Sum_probs=202.0
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|.+.+.||+|+||.||+|++. +++.||+|++... .......+.+|+.+++.++||||+++++++......++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999985 6899999998642 2233457889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+ +|+|.+++...+ .+++.+++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 89 E~~-~g~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK----RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp CCC-CEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred ECC-CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 999 679999997654 689999999999999999999999 999999999999999999999999999986643
Q ss_pred ccccccccccccCCcccCccccCCCCC-CchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRC-STKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
... ....+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||........ ...+... ...
T Consensus 161 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~----------~~~i~~~-~~~ 226 (336)
T 3h4j_B 161 GNF---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL----------FKKVNSC-VYV 226 (336)
T ss_dssp SBT---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC----------BCCCCSS-CCC
T ss_pred Ccc---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH----------HHHHHcC-CCC
Confidence 322 245679999999999988776 7899999999999999999999975432210 0000000 001
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.....+ ..+.+++.+||+.||.+|||++|++++
T Consensus 227 ~p~~~s------~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 227 MPDFLS------PGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCTTSC------HHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CcccCC------HHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 111111 134569999999999999999999987
No 83
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=373.34 Aligned_cols=263 Identities=25% Similarity=0.351 Sum_probs=211.0
Q ss_pred cCCCCCceEeEeCceEEEEEEEC------CCCEEEEEEeecc-CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK------DGSTVAIKKLIHI-SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERL 932 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 932 (1176)
++|++.+.||+|+||+||+|++. +++.||||++... ......++.+|+.++++++||||+++++++.+....+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56889999999999999999853 4668999998543 2233456889999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHHhhcccc---CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCC---cEEEEe
Q 046275 933 LVYEYMRYGSLEDVLHNQKKV---GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENF---EARVSD 1006 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~D 1006 (1176)
+||||+++|+|.+++...+.. ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECC
Confidence 999999999999999876422 23589999999999999999999999 999999999999999554 599999
Q ss_pred eccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhcc
Q 046275 1007 FGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKL 1085 (1176)
Q Consensus 1007 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 1085 (1176)
||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||.... ...........
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~-----~~~~~~~i~~~ 302 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLEFVTSG 302 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----HHHHHHHHHTT
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcC
Confidence 999986544333333345678999999999988899999999999999999998 999986543 12222222221
Q ss_pred ccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1086 KISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1086 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
... ......+ ..+.+++.+||+.||++|||+.+++++|+.+.+..
T Consensus 303 ~~~-----~~~~~~~------~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 303 GRM-----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp CCC-----CCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCC-----CCCccCC------HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 111 1111111 13556999999999999999999999999997653
No 84
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2e-38 Score=362.99 Aligned_cols=257 Identities=24% Similarity=0.415 Sum_probs=200.2
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCE----EEEEEeecc-CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGST----VAIKKLIHI-SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLL 933 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 933 (1176)
++|++.+.||+|+||+||+|++. +++. ||+|++... .....+.+.+|+.++++++||||+++++++..+. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 46889999999999999999975 3443 577776432 2344567999999999999999999999998754 788
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
|+||+.+|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 94 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEECCTTCBHHHHHHHST---TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 999999999999998753 2689999999999999999999999 9999999999999999999999999999877
Q ss_pred ccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1014 SAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1014 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
.............||+.|+|||++.+..++.++|||||||++|||++ |+.||..... ............... +
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~~~~~~----~ 241 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQ----P 241 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTCCCCC----C
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH--HHHHHHHHcCCCCCC----C
Confidence 65444333345567889999999999999999999999999999999 9999976432 122222211111010 0
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhh
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 1139 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~ 1139 (1176)
...+ ..+.+++.+||+.||++|||+.+++++|+++..
T Consensus 242 ----~~~~------~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 242 ----PICT------IDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ----TTBC------HHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ----ccCC------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1111 145569999999999999999999999998864
No 85
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2e-38 Score=368.87 Aligned_cols=274 Identities=18% Similarity=0.223 Sum_probs=208.5
Q ss_pred HhcCCCCCceEeEeCceEEEEEEECC------CCEEEEEEeeccCCcC-----------HHHHHHHHHHHHhcCCCCccc
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLKD------GSTVAIKKLIHISGQG-----------DREFTAEMETIGKIKHRNLVP 920 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 920 (1176)
..++|++.+.||+|+||.||+|++.. ++.||||.+....... ...+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34579999999999999999998864 4789999876432111 112344556677778999999
Q ss_pred ceeEEeeC----CeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE
Q 046275 921 LLGYCKVG----EERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL 996 (1176)
Q Consensus 921 l~~~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll 996 (1176)
+++++... ...|+||||+ +|+|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA---KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEE
Confidence 99998764 4579999999 999999998652 3699999999999999999999999 99999999999999
Q ss_pred C--CCCcEEEEeecccccccccccccc-----ccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Q 046275 997 D--ENFEARVSDFGMARLMSAMDTHLS-----VSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSAD 1069 (1176)
Q Consensus 997 ~--~~~~~kl~DfGla~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~ 1069 (1176)
+ .++.+||+|||+++.+........ .....||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 8 889999999999987654332211 134459999999999999999999999999999999999999997533
Q ss_pred CCCccHHHHHHHhhccccccccCcccc-cCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCCC
Q 046275 1070 FGDNNLVGWVKQHAKLKISDVFDPELM-KEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDS 1145 (1176)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~~ 1145 (1176)
................+.+.+++.+. ...| ..+.+++..||+.||++||++.++++.|+++....+...
T Consensus 266 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~ 335 (364)
T 3op5_A 266 -KDPKYVRDSKIRYRENIASLMDKCFPAANAP------GEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKD 335 (364)
T ss_dssp -TCHHHHHHHHHHHHHCHHHHHHHHSCTTCCC------HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred -cCHHHHHHHHHHhhhhHHHHHHHhcccccCH------HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCc
Confidence 22222222222222222222222221 1112 145569999999999999999999999999987655443
No 86
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.3e-38 Score=370.60 Aligned_cols=260 Identities=25% Similarity=0.411 Sum_probs=198.0
Q ss_pred cCCCCCceEeEeCceEEEEEEEC----CCCEEEEEEeeccC-CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK----DGSTVAIKKLIHIS-GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
++|++.+.||+|+||.||+|+++ ++..||||++.... ....+.+.+|+.++++++||||+++++++.+....++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57999999999999999999875 57789999986432 22345789999999999999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+++|+|.++++..+ ..+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 125 ~e~~~~~sL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 99999999999998653 3689999999999999999999999 99999999999999999999999999998765
Q ss_pred ccccc-ccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1015 AMDTH-LSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1015 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
..... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||.... .............
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~-----~~~~~~~i~~~~~----- 268 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-----NQDVIKAVDEGYR----- 268 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC-----HHHHHHHHHTTEE-----
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCC-----
Confidence 43221 11123345788999999998899999999999999999998 999986543 1122222211110
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
.......+ ..+.+++.+||+.||++||++.++++.|+++....
T Consensus 269 ~~~~~~~~------~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 269 LPPPMDCP------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp CCCCTTCB------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred CCCCcccc------HHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 00111111 24566999999999999999999999999997653
No 87
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.4e-38 Score=354.68 Aligned_cols=258 Identities=22% Similarity=0.374 Sum_probs=208.5
Q ss_pred hcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeec
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYM 938 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 938 (1176)
.++|++.+.||+|+||.||+|++.++..||+|++... ....+++.+|++++++++||||+++++++.+....++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCC-CCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 3568889999999999999999998889999998643 334577999999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccccc
Q 046275 939 RYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDT 1018 (1176)
Q Consensus 939 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 1018 (1176)
++|+|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 102 ~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 102 ANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp TTCBHHHHHHCGGG---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred CCCcHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 99999999986432 689999999999999999999999 999999999999999999999999999986643222
Q ss_pred cccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCccccc
Q 046275 1019 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMK 1097 (1176)
Q Consensus 1019 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1176)
.......+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||..... ........... ....+ .
T Consensus 176 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~-----~~~~~~~~~~~--~~~~~---~ 244 (283)
T 3gen_A 176 -TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN-----SETAEHIAQGL--RLYRP---H 244 (283)
T ss_dssp -HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHHHHHHHTTC--CCCCC---T
T ss_pred -ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh-----hHHHHHHhccc--CCCCC---C
Confidence 12234457888999999998899999999999999999998 9999875431 12222221111 00111 1
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1098 EDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1098 ~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
..+ ..+.+++.+||+.||++|||+++++++|+++...
T Consensus 245 ~~~------~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 245 LAS------EKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TCC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCC------HHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 111 1355699999999999999999999999998743
No 88
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-38 Score=357.49 Aligned_cols=252 Identities=21% Similarity=0.288 Sum_probs=206.8
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
.++|++.+.||+|+||+||+|+++ +++.||+|.+.. .......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC-CTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEec-CcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467999999999999999999987 578899998753 233445688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC--CCcEEEEeecccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE--NFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGla~~~~~ 1015 (1176)
+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++....
T Consensus 83 ~~g~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 83 ISGLDIFERINTSA---FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCCBHHHHHTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred CCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 99999999997543 3689999999999999999999999 9999999999999987 78999999999987654
Q ss_pred ccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCccc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPEL 1095 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1095 (1176)
... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ............. .+++..
T Consensus 157 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~--~~~~~~ 226 (321)
T 1tki_A 157 GDN---FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET-----NQQIIENIMNAEY--TFDEEA 226 (321)
T ss_dssp TCE---EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCC--CCCHHH
T ss_pred CCc---cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC-----HHHHHHHHHcCCC--CCChhh
Confidence 322 245679999999999999889999999999999999999999996543 1222222222221 112222
Q ss_pred ccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1096 MKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1096 ~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
+...+ ..+.+++.+||+.||++|||+.|++++
T Consensus 227 ~~~~s------~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 227 FKEIS------IEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HTTSC------HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hccCC------HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 22222 235679999999999999999999987
No 89
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.9e-38 Score=361.39 Aligned_cols=257 Identities=27% Similarity=0.414 Sum_probs=203.6
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCE----EEEEEeeccC-CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGST----VAIKKLIHIS-GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLL 933 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 933 (1176)
++|++.+.||+|+||+||+|++. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++. +...++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 46888999999999999999976 3444 7777764332 233356788999999999999999999986 456889
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
||||+.+|+|.+++...+ ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHR---GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEECCTTCBSHHHHHSSG---GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEeCCCCCHHHHHHHcc---ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence 999999999999998653 2688999999999999999999999 9999999999999999999999999999887
Q ss_pred ccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1014 SAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1014 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
.............||+.|+|||++.+..++.++||||||+++|||++ |+.||..... ...................+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 243 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--AEVPDLLEKGERLAQPQICT 243 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT--THHHHHHHTTCBCCCCTTBC
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH--HHHHHHHHcCCCCCCCCcCc
Confidence 65444434455678889999999998899999999999999999999 9999976432 22222222111111111111
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhh
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 1139 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~ 1139 (1176)
+ .+.+++.+||+.||++|||+.+++++|+++..
T Consensus 244 ~--------------~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 244 I--------------DVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp T--------------TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred H--------------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1 23459999999999999999999999999864
No 90
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3e-38 Score=359.44 Aligned_cols=266 Identities=26% Similarity=0.450 Sum_probs=213.5
Q ss_pred hcCCCCCceEeEeCceEEEEEEE------CCCCEEEEEEeeccCC-cCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKL------KDGSTVAIKKLIHISG-QGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEE 930 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 930 (1176)
.++|++.+.||+|+||.||+|++ .+++.||+|++..... ...+.+.+|+.+++++ +||||+++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 35788999999999999999986 2467899999864332 2346688999999999 99999999999999999
Q ss_pred eEEEEeeccCCCHHHHHhhcccc--------------CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKV--------------GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL 996 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll 996 (1176)
.++||||+++|+|.+++...... ..++++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 99999999999999999865421 22589999999999999999999999 99999999999999
Q ss_pred CCCCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccH
Q 046275 997 DENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNL 1075 (1176)
Q Consensus 997 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~ 1075 (1176)
+.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||....... ..
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~ 257 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KF 257 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-HH
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-HH
Confidence 9999999999999987655443333345567889999999988899999999999999999999 999997654221 11
Q ss_pred HHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCC
Q 046275 1076 VGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSG 1142 (1176)
Q Consensus 1076 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~ 1142 (1176)
....... . .+......+ ..+.+++.+||+.||.+|||+.|++++|+++.....
T Consensus 258 ~~~~~~~----~----~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 258 YKMIKEG----F----RMLSPEHAP------AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HHHHHHT----C----CCCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHHhccC----C----CCCCcccCC------HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 1111111 1 011111111 235669999999999999999999999999886544
No 91
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-38 Score=365.08 Aligned_cols=266 Identities=23% Similarity=0.370 Sum_probs=209.2
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC------CCCEEEEEEeeccC-CcCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK------DGSTVAIKKLIHIS-GQGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEE 930 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 930 (1176)
.++|.+.+.||+|+||.||+|++. ++..||+|.+.... ....+.+.+|+.+++++ +||||+++++++...+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 467899999999999999999872 35689999986432 23446789999999999 89999999999999999
Q ss_pred eEEEEeeccCCCHHHHHhhcccc-------------------CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCC
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKV-------------------GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKS 991 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp 991 (1176)
.++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCh
Confidence 99999999999999999865321 12479999999999999999999999 999999999
Q ss_pred CCEEECCCCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCC
Q 046275 992 SNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADF 1070 (1176)
Q Consensus 992 ~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~ 1070 (1176)
+||+++.++.+||+|||++................||+.|+|||++.+..++.++||||||+++|||+| |+.||.....
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 999999999999999999987654433333345567889999999988899999999999999999998 9999976542
Q ss_pred CCccHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCC
Q 046275 1071 GDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSG 1142 (1176)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~ 1142 (1176)
. ..+..... .. . .+......+ ..+.+++.+||+.||.+|||+.+++++|+.+.+...
T Consensus 281 ~-~~~~~~~~---~~-~----~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 281 D-ANFYKLIQ---NG-F----KMDQPFYAT------EEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp S-HHHHHHHH---TT-C----CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred H-HHHHHHHh---cC-C----CCCCCCCCC------HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 2 11211111 11 1 111111111 135569999999999999999999999999876543
No 92
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-38 Score=355.95 Aligned_cols=245 Identities=22% Similarity=0.352 Sum_probs=204.4
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|++.+.||+|+||+||+|+.+ +|+.||+|++.+. .....+.+.+|+.+++.++||||+++++++.+....|+||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56889999999999999999987 6899999998643 2234567889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+++|+|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ----RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp CCCCSCBHHHHHHHTS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 9999999999998654 689999999999999999999999 999999999999999999999999999986543
Q ss_pred ccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCccc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPEL 1095 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1095 (1176)
. ....+||+.|+|||++.+..++.++||||+||++|||++|+.||...+ .......+..... .+++
T Consensus 159 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~--~~p~-- 224 (318)
T 1fot_A 159 V-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN-----TMKTYEKILNAEL--RFPP-- 224 (318)
T ss_dssp C-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHCCC--CCCT--
T ss_pred c-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCC--CCCC--
Confidence 2 235679999999999999999999999999999999999999996532 2222222222211 0111
Q ss_pred ccCCCchHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 046275 1096 MKEDPNIEIELLQHLHVASACLDDRPWRRP-----TMIQVMAM 1133 (1176)
Q Consensus 1096 ~~~~~~~~~~~~~~~~li~~cl~~dp~~RP-----t~~evl~~ 1133 (1176)
..+ ..+.+++.+||+.||++|| +++++++|
T Consensus 225 --~~~------~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 225 --FFN------EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp --TSC------HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred --CCC------HHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 111 1355699999999999999 88998865
No 93
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=7.1e-38 Score=362.86 Aligned_cols=252 Identities=23% Similarity=0.299 Sum_probs=205.5
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
.++|++.+.||+|+||.||+|+++ +|+.||+|++..... ...+.+.+|+.++++++||||+++++++.+....|+||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999986 689999999865332 23356889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCC---CcEEEEeeccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDEN---FEARVSDFGMARL 1012 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfGla~~ 1012 (1176)
||+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.+ +.+||+|||++..
T Consensus 108 e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp CCCCSCBHHHHHTTCS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 9999999999997654 689999999999999999999999 99999999999999865 4599999999986
Q ss_pred cccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1013 MSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1013 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
...... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||...+ .............. ++
T Consensus 181 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~-----~~~~~~~i~~~~~~--~~ 250 (362)
T 2bdw_A 181 VNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----QHRLYAQIKAGAYD--YP 250 (362)
T ss_dssp CTTCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCC--CC
T ss_pred ecCCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCCC--CC
Confidence 653322 245679999999999999899999999999999999999999986543 12222222222211 11
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+...+ ..+.+++.+||+.||++|||+.+++++
T Consensus 251 ~~~~~~~~------~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 251 SPEWDTVT------PEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp TTGGGGSC------HHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccCCC------HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11111122 135569999999999999999999876
No 94
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=4.3e-38 Score=359.89 Aligned_cols=267 Identities=21% Similarity=0.339 Sum_probs=195.7
Q ss_pred HhcCCCCCceEeEeCceEEEEEEECC-C---CEEEEEEeecc--CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCee
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLKD-G---STVAIKKLIHI--SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEER 931 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 931 (1176)
..++|++.+.||+|+||.||+|++.. + ..||||++... .....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34679999999999999999998764 3 27999988643 233456789999999999999999999999877665
Q ss_pred ------EEEEeeccCCCHHHHHhhccc--cCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEE
Q 046275 932 ------LLVYEYMRYGSLEDVLHNQKK--VGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEAR 1003 (1176)
Q Consensus 932 ------~lV~E~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 1003 (1176)
++||||+++|+|.+++..... ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEE
Confidence 999999999999999976532 223589999999999999999999999 999999999999999999999
Q ss_pred EEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHh
Q 046275 1004 VSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQH 1082 (1176)
Q Consensus 1004 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~ 1082 (1176)
|+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |+.||...... ..... .
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~---~ 252 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--EIYNY---L 252 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHH---H
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--HHHHH---H
Confidence 999999987654433333334567889999999999899999999999999999999 99999764321 11111 1
Q ss_pred hccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCC
Q 046275 1083 AKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 1143 (1176)
Q Consensus 1083 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~ 1143 (1176)
...... ......+ ..+.+++.+||+.||++|||+.++++.|+++......
T Consensus 253 ~~~~~~-----~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 253 IGGNRL-----KQPPECM------EEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302 (323)
T ss_dssp HTTCCC-----CCCTTCC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred hcCCCC-----CCCCccC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence 111110 0111111 2456799999999999999999999999999865433
No 95
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=7e-38 Score=348.53 Aligned_cols=253 Identities=32% Similarity=0.482 Sum_probs=193.8
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCC----cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISG----QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|++.+.||+|+||.||+|++. ++.||||++..... ...+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57889999999999999999986 89999998864322 22467889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC--------CCcEEEEee
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE--------NFEARVSDF 1007 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~--------~~~~kl~Df 1007 (1176)
||+++++|.+++... .+++..++.++.|++.||+|||+.+..+|+||||||+||+++. ++.+||+||
T Consensus 86 e~~~~~~L~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK-----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp ECCTTEEHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EcCCCCCHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999998643 5899999999999999999999993333999999999999986 678999999
Q ss_pred ccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccc
Q 046275 1008 GMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKI 1087 (1176)
Q Consensus 1008 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 1087 (1176)
|+++....... ....||+.|+|||++.+..++.++||||+|+++|+|++|+.||...+. ............
T Consensus 161 g~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~ 231 (271)
T 3dtc_A 161 GLAREWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG-----LAVAYGVAMNKL 231 (271)
T ss_dssp CC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH-----HHHHHHHHTSCC
T ss_pred Ccccccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHhhhcCCC
Confidence 99986543222 245789999999999988999999999999999999999999975431 111111111111
Q ss_pred ccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 046275 1088 SDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 1137 (1176)
Q Consensus 1088 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i 1137 (1176)
. .......+ ..+.+++.+||+.||++|||+.|++++|+++
T Consensus 232 ~----~~~~~~~~------~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 232 A----LPIPSTCP------EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp C----CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred C----CCCCcccC------HHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1 11111112 1356699999999999999999999999864
No 96
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=8e-38 Score=364.53 Aligned_cols=253 Identities=20% Similarity=0.293 Sum_probs=207.2
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
.++|++.+.||+|+||.||+|+++ +|+.||+|.+..........+.+|+.++++++||||+++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 357999999999999999999987 6889999988655444556789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC--CCcEEEEeecccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE--NFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGla~~~~~ 1015 (1176)
+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++....
T Consensus 130 ~~gg~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 130 LSGGELFDRIAAED---YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCCBHHHHTTCTT---CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 99999999997543 3689999999999999999999999 9999999999999974 57799999999987654
Q ss_pred ccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCccc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPEL 1095 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1095 (1176)
... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...+ ............. .+++..
T Consensus 204 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~-----~~~~~~~i~~~~~--~~~~~~ 273 (387)
T 1kob_A 204 DEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED-----DLETLQNVKRCDW--EFDEDA 273 (387)
T ss_dssp TSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHHCCC--CCCSST
T ss_pred Ccc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCC--CCCccc
Confidence 322 234579999999999999999999999999999999999999997543 1222222222211 112222
Q ss_pred ccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1096 MKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1096 ~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
....+ ..+.+++.+||+.||++|||+.|++++
T Consensus 274 ~~~~s------~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 274 FSSVS------PEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTTSC------HHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccCC------HHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 22222 135579999999999999999999986
No 97
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1e-37 Score=354.26 Aligned_cols=265 Identities=24% Similarity=0.314 Sum_probs=202.2
Q ss_pred hcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
.++|++.+.||+|+||+||+|++.+|+.||+|++..... ...+.+.+|++++++++||||+++++++.++...++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 367999999999999999999998899999999864322 223568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAM 1016 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 1016 (1176)
|+++ +|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 100 FMEK-DLKKVLDENK---TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp CCSE-EHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred CCCC-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 9985 8888887653 2589999999999999999999999 9999999999999999999999999999876432
Q ss_pred cccccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccc---ccccC
Q 046275 1017 DTHLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKI---SDVFD 1092 (1176)
Q Consensus 1017 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 1092 (1176)
.. ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+ .+............ ....+
T Consensus 173 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 249 (311)
T 3niz_A 173 VR--SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQE 249 (311)
T ss_dssp CC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTT
T ss_pred cc--cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhc
Confidence 22 2244578999999999876 568999999999999999999999997654322 22222221111100 00000
Q ss_pred c--------ccccCCCchH---HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1093 P--------ELMKEDPNIE---IELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1093 ~--------~~~~~~~~~~---~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
. ......+... ....++.+++.+||+.||++|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 0000000000 001245679999999999999999999875
No 98
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=369.79 Aligned_cols=254 Identities=20% Similarity=0.252 Sum_probs=205.2
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEE
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
..++|++.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3457999999999999999999886 688999998865332 2345688999999999999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEEC---CCCcEEEEeecccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLD---ENFEARVSDFGMAR 1011 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfGla~ 1011 (1176)
|||+++|+|.+.+...+ .+++..+..++.|++.||.|||+. +|+||||||+||+++ .++.+||+|||+++
T Consensus 89 ~E~~~gg~L~~~i~~~~----~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE----YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 99999999999998764 689999999999999999999999 999999999999998 46789999999998
Q ss_pred ccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccccccc
Q 046275 1012 LMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVF 1091 (1176)
Q Consensus 1012 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1091 (1176)
....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...+ .............. +
T Consensus 162 ~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~-----~~~~~~~i~~~~~~--~ 232 (444)
T 3soa_A 162 EVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED-----QHRLYQQIKAGAYD--F 232 (444)
T ss_dssp CCCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHTCCC--C
T ss_pred EecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHHhCCCC--C
Confidence 6654322 2245679999999999999999999999999999999999999996533 22222222222211 1
Q ss_pred CcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1092 DPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1092 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
+...+...+ ..+.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~s------~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 PSPEWDTVT------PEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp CTTTTTTSC------HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CccccccCC------HHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 111111122 135569999999999999999999986
No 99
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.3e-38 Score=373.12 Aligned_cols=258 Identities=26% Similarity=0.328 Sum_probs=206.5
Q ss_pred HHHHHhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCC
Q 046275 854 DLLEATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGE 929 (1176)
Q Consensus 854 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 929 (1176)
++....++|++.+.||+|+||+||+|+++ +++.||+|++.+. .....+.+.+|+.+++.++|||||++++++.+..
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 44455678999999999999999999987 5889999998642 2233445889999999999999999999999999
Q ss_pred eeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecc
Q 046275 930 ERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGM 1009 (1176)
Q Consensus 930 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 1009 (1176)
..|+||||+++|+|.++++.. .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccce
Confidence 999999999999999999754 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccccccCCcccCccccCCCC----CCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcc
Q 046275 1010 ARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFR----CSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKL 1085 (1176)
Q Consensus 1010 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 1085 (1176)
|+....... ......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+ .......+...
T Consensus 215 a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-----~~~~~~~i~~~ 288 (410)
T 3v8s_A 215 CMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-----LVGTYSKIMNH 288 (410)
T ss_dssp CEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTH
T ss_pred eEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC-----hhhHHHHHHhc
Confidence 987654322 1234668999999999997655 7889999999999999999999997543 22222222211
Q ss_pred ccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHH
Q 046275 1086 KISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWR--RPTMIQVMAM 1133 (1176)
Q Consensus 1086 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~--RPt~~evl~~ 1133 (1176)
...-.++. ....+ ..+.+++.+||+.+|.+ ||+++||++|
T Consensus 289 ~~~~~~p~--~~~~s------~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 289 KNSLTFPD--DNDIS------KEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHHCCCCT--TCCCC------HHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cccccCCC--ccccc------HHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 10000110 00111 13556999999999988 9999999987
No 100
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=8.1e-38 Score=358.64 Aligned_cols=266 Identities=20% Similarity=0.228 Sum_probs=213.6
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCeeEEEEe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
.++|++.+.||+|+||+||+|++. +|+.||||.+.... ..+.+.+|+++++++ +||||+++++++......++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 357899999999999999999975 68899999886432 234688999999999 99999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCc-----EEEEeecccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFE-----ARVSDFGMAR 1011 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DfGla~ 1011 (1176)
|+ +|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++
T Consensus 86 ~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 86 LL-GPSLEDLFDLCD---RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred eC-CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 99 899999998652 2699999999999999999999999 9999999999999998887 9999999998
Q ss_pred ccccccccc-----cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccc
Q 046275 1012 LMSAMDTHL-----SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLK 1086 (1176)
Q Consensus 1012 ~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 1086 (1176)
......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~--~~~~~~~~i~~~~ 236 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD--TLKERYQKIGDTK 236 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS--SHHHHHHHHHHHH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc--cHHHHHHHHHhhh
Confidence 764433211 124567999999999999999999999999999999999999999865422 2222222221111
Q ss_pred cccccCcc-cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCC
Q 046275 1087 ISDVFDPE-LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLD 1144 (1176)
Q Consensus 1087 ~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~ 1144 (1176)
.. .... .....| .+.+++.+||+.||.+||+++++++.|+++....+..
T Consensus 237 ~~--~~~~~~~~~~p-------~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~ 286 (330)
T 2izr_A 237 RA--TPIEVLCENFP-------EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYM 286 (330)
T ss_dssp HH--SCHHHHTTTCH-------HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred cc--CCHHHHhccCh-------HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 10 0001 111111 4567999999999999999999999999998765543
No 101
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3e-38 Score=362.42 Aligned_cols=251 Identities=24% Similarity=0.338 Sum_probs=204.3
Q ss_pred HHhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC---CcCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCee
Q 046275 857 EATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS---GQGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEER 931 (1176)
Q Consensus 857 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 931 (1176)
...++|.+.+.||+|+||+||+|+++ +|+.||+|++.+.. ....+.+..|..++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34578999999999999999999987 58899999986532 33456678899999887 999999999999999999
Q ss_pred EEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccc
Q 046275 932 LLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1011 (1176)
Q Consensus 932 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 1011 (1176)
|+||||+++|+|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 99999999999999998754 689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccccccc
Q 046275 1012 LMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVF 1091 (1176)
Q Consensus 1012 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1091 (1176)
....... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||...+ .......+..... .+
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~~~--~~ 237 (345)
T 1xjd_A 167 ENMLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD-----EEELFHSIRMDNP--FY 237 (345)
T ss_dssp CCCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCC--CC
T ss_pred hcccCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHHhCCC--CC
Confidence 5432221 2345689999999999999999999999999999999999999997543 1222222222111 01
Q ss_pred CcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHH-HHHHH
Q 046275 1092 DPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMI-QVMAM 1133 (1176)
Q Consensus 1092 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~-evl~~ 1133 (1176)
+ ...+ ..+.+++.+||+.||++||++. ++++|
T Consensus 238 p----~~~s------~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 238 P----RWLE------KEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp C----TTSC------HHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred C----cccC------HHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 1 1111 1355699999999999999997 66543
No 102
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.2e-38 Score=377.67 Aligned_cols=261 Identities=23% Similarity=0.388 Sum_probs=211.2
Q ss_pred hcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeec
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYM 938 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 938 (1176)
.++|.+.+.||+|+||.||+|+++++..||||++... ....+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCC-CccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 3568888999999999999999988899999998653 345678999999999999999999999986 66789999999
Q ss_pred cCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccccc
Q 046275 939 RYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDT 1018 (1176)
Q Consensus 939 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 1018 (1176)
++|+|.++++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 265 ~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 265 AKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp TTCBHHHHHHSHHH--HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred CCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 99999999986532 2578999999999999999999999 999999999999999999999999999987643221
Q ss_pred cccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCccccc
Q 046275 1019 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMK 1097 (1176)
Q Consensus 1019 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1176)
.......+|+.|+|||++....++.++|||||||++|||+| |+.||...+ ..+......... ......
T Consensus 340 -~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~-----~~~~~~ 408 (454)
T 1qcf_A 340 -TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-----NPEVIRALERGY-----RMPRPE 408 (454)
T ss_dssp -HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----HHHHHHHHHHTC-----CCCCCT
T ss_pred -eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCC-----CCCCCC
Confidence 11233456789999999998899999999999999999999 999997543 112222222111 011111
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCC
Q 046275 1098 EDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 1143 (1176)
Q Consensus 1098 ~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~ 1143 (1176)
..+ ..+.+++.+||+.||++|||+++|++.|+++....+.
T Consensus 409 ~~~------~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~ 448 (454)
T 1qcf_A 409 NCP------EELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATES 448 (454)
T ss_dssp TSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCC
T ss_pred CCC------HHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcccc
Confidence 112 1355699999999999999999999999998765443
No 103
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=360.40 Aligned_cols=270 Identities=21% Similarity=0.307 Sum_probs=208.9
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEee----CCeeEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKV----GEERLL 933 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 933 (1176)
.++|++.+.||+|+||.||+|+.. +|+.||+|++........+.+.+|+.+++.++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 357899999999999999999984 789999999876555556678999999999999999999999863 347799
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
||||+++|+|.+++.........+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999987544445799999999999999999999999 9999999999999999999999999998765
Q ss_pred ccccccc-------cccccccCCcccCccccCCCC---CCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhh
Q 046275 1014 SAMDTHL-------SVSTLAGTPGYVPPEYYQSFR---CSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHA 1083 (1176)
Q Consensus 1014 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~ 1083 (1176)
....... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||................
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-- 262 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN-- 262 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC--
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc--
Confidence 3211110 112345799999999987543 6889999999999999999999985421111111111111
Q ss_pred ccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCCC
Q 046275 1084 KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDS 1145 (1176)
Q Consensus 1084 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~~ 1145 (1176)
.... ......+ ..+.+++.+||+.||.+|||+.+++++|+++........
T Consensus 263 ~~~~------~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~~ 312 (317)
T 2buj_A 263 QLSI------PQSPRHS------SALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQH 312 (317)
T ss_dssp C--C------CCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC--
T ss_pred cCCC------CccccCC------HHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCCC
Confidence 0000 0001111 135669999999999999999999999999986655443
No 104
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=8.9e-38 Score=362.10 Aligned_cols=253 Identities=23% Similarity=0.310 Sum_probs=195.8
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
.++|.+.+.||+|+||+||+|+++ +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467999999999999999999987 78999999986533 3346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCc--EEEEeecccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFE--ARVSDFGMARLMSA 1015 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DfGla~~~~~ 1015 (1176)
+++|+|.+++...+ ++++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++....
T Consensus 98 ~~~~~L~~~l~~~~----~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 98 ASGGELYERICNAG----RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp CCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 99999999997654 689999999999999999999999 9999999999999987765 99999999974332
Q ss_pred ccccccccccccCCcccCccccCCCCCCch-hhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRCSTK-GDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
.. ......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||...... ..+............. ++..
T Consensus 171 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~~~~~~~~~~~~--~~~~ 244 (361)
T 3uc3_A 171 HS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP-RDYRKTIQRILSVKYS--IPDD 244 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C-CCHHHHHHHHHTTCCC--CCTT
T ss_pred cC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH-HHHHHHHHHHhcCCCC--CCCc
Confidence 21 2244579999999999988777665 89999999999999999999765432 2233333222222111 1110
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
. ..+ ..+.+++.+||+.||++|||+.|+++|
T Consensus 245 ~--~~s------~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 245 I--RIS------PECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp S--CCC------HHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred C--CCC------HHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0 011 235679999999999999999999987
No 105
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2e-37 Score=349.92 Aligned_cols=267 Identities=19% Similarity=0.194 Sum_probs=212.3
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCeeEEEEe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
.++|++.+.||+|+||.||+|++. +|+.||+|++... ...+.+.+|+.+++++ +|+|++++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 357999999999999999999975 6899999988543 2334678899999999 79999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCc-----EEEEeecccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFE-----ARVSDFGMAR 1011 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DfGla~ 1011 (1176)
|+ +++|.+++...+ .++++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++
T Consensus 87 ~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 87 LL-GPSLEDLLDLCG---RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred ec-CCCHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99 899999998653 2589999999999999999999999 9999999999999987766 9999999998
Q ss_pred cccccccc-----ccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccc
Q 046275 1012 LMSAMDTH-----LSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLK 1086 (1176)
Q Consensus 1012 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 1086 (1176)
........ .......||+.|+|||++.+..++.++||||||+++|||++|+.||........ ...........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~ 237 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--KQKYERIGEKK 237 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--HHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--HHHHHHHHhhc
Confidence 76543221 112456799999999999999999999999999999999999999986543221 11111111110
Q ss_pred cccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCC
Q 046275 1087 ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 1143 (1176)
Q Consensus 1087 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~ 1143 (1176)
.. ...+......+ ..+.+++.+||+.||++|||++++++.|+++....+.
T Consensus 238 ~~-~~~~~~~~~~~------~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~ 287 (298)
T 1csn_A 238 QS-TPLRELCAGFP------EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 287 (298)
T ss_dssp HH-SCHHHHTTTSC------HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred cC-ccHHHHHhhCc------HHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence 00 00011111112 1355699999999999999999999999999876544
No 106
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.2e-38 Score=348.73 Aligned_cols=257 Identities=28% Similarity=0.397 Sum_probs=211.0
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeecc
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMR 939 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 939 (1176)
++|++.+.||+|+||.||+|++.+++.||+|++.... ...+.+.+|++++++++||||+++++++.++...++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 4688899999999999999999888999999986533 345779999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccccc
Q 046275 940 YGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTH 1019 (1176)
Q Consensus 940 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 1019 (1176)
+|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 87 ~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~- 159 (267)
T 3t9t_A 87 HGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY- 159 (267)
T ss_dssp TCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH-
T ss_pred CCcHHHHHhhCc---ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccccc-
Confidence 999999997653 2589999999999999999999999 999999999999999999999999999986543221
Q ss_pred ccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCcccccC
Q 046275 1020 LSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKE 1098 (1176)
Q Consensus 1020 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1176)
.......|++.|+|||++.+..++.++||||+|+++|+|++ |+.||.... ............ .......
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~i~~~~-----~~~~~~~ 229 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-----NSEVVEDISTGF-----RLYKPRL 229 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTTC-----CCCCCTT
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC-----HHHHHHHHhcCC-----cCCCCcc
Confidence 12234567889999999988889999999999999999999 899986543 222222222211 0111111
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1099 DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1099 ~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
.+ ..+.+++.+||+.||++|||+++++++|+++.++
T Consensus 230 ~~------~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 230 AS------THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp SC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred Cc------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11 1355699999999999999999999999999764
No 107
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.8e-38 Score=359.33 Aligned_cols=253 Identities=24% Similarity=0.313 Sum_probs=202.0
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcC---HHHHHHHHHHHHhc-CCCCcccceeEEeeCCeeEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQG---DREFTAEMETIGKI-KHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 934 (1176)
++|++.+.||+|+||.||+|+++ +++.||+|++.+..... .+.+.+|..+++++ +||||+++++++.+....|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46889999999999999999987 58899999987543222 34578899999988 899999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+++|+|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 99999999999998654 689999999999999999999999 99999999999999999999999999997543
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCC----ccHHHHHHHhhccccccc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD----NNLVGWVKQHAKLKISDV 1090 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~----~~~~~~~~~~~~~~~~~~ 1090 (1176)
... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ............... .
T Consensus 162 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~--~ 237 (345)
T 3a8x_A 162 RPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--R 237 (345)
T ss_dssp CTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC--C
T ss_pred CCC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC--C
Confidence 222 12345689999999999999999999999999999999999999997532211 111111122222111 0
Q ss_pred cCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCH------HHHHHH
Q 046275 1091 FDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTM------IQVMAM 1133 (1176)
Q Consensus 1091 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~------~evl~~ 1133 (1176)
++ ...+ ..+.+++.+||+.||++||++ +|+++|
T Consensus 238 ~p----~~~s------~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 238 IP----RSLS------VKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp CC----TTSC------HHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred CC----CCCC------HHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 11 1111 135569999999999999995 566654
No 108
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.8e-38 Score=374.80 Aligned_cols=263 Identities=24% Similarity=0.277 Sum_probs=207.4
Q ss_pred HHHHHHHhcCCCCCceEeEeCceEEEEEEECC-CCEEEEEEeecc---CCcCHHHHHHHHHHHHhcCCCCcccceeEEee
Q 046275 852 FADLLEATNGFHNDSLIGSGGFGDVYKAKLKD-GSTVAIKKLIHI---SGQGDREFTAEMETIGKIKHRNLVPLLGYCKV 927 (1176)
Q Consensus 852 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 927 (1176)
+.++....++|++.++||+|+||+||+|+++. ++.||+|++.+. .....+.+.+|+.++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 34445567889999999999999999999874 788999988642 12223348899999999999999999999999
Q ss_pred CCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEee
Q 046275 928 GEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDF 1007 (1176)
Q Consensus 928 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 1007 (1176)
.+..|+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +||||||||+|||++.++.+||+||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~---~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFE---DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEecCCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 999999999999999999998642 2689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccccccCCcccCccccC-----CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHh
Q 046275 1008 GMARLMSAMDTHLSVSTLAGTPGYVPPEYYQ-----SFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQH 1082 (1176)
Q Consensus 1008 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~ 1082 (1176)
|+|+........ .....+||+.|+|||++. ...++.++|||||||++|||++|+.||...+ ..+....+
T Consensus 220 Gla~~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~-----~~~~~~~i 293 (437)
T 4aw2_A 220 GSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES-----LVETYGKI 293 (437)
T ss_dssp TTCEECCTTSCE-ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHH
T ss_pred hhhhhcccCCCc-ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC-----hhHHHHhh
Confidence 999766443322 224468999999999986 5678999999999999999999999997543 11122111
Q ss_pred hccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHH
Q 046275 1083 AKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWR--RPTMIQVMAM 1133 (1176)
Q Consensus 1083 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~--RPt~~evl~~ 1133 (1176)
......-.++ ......+ ..+.+++.+||..+|++ ||+++|+++|
T Consensus 294 ~~~~~~~~~p-~~~~~~s------~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 294 MNHKERFQFP-TQVTDVS------ENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HTHHHHCCCC-SSCCCSC------HHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred hhccccccCC-cccccCC------HHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 1110000011 1111111 13556999999988888 9999999886
No 109
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.6e-38 Score=352.63 Aligned_cols=249 Identities=24% Similarity=0.334 Sum_probs=195.6
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc--------------------------CHHHHHHHHHHHHh
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ--------------------------GDREFTAEMETIGK 912 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~ 912 (1176)
++|++.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57899999999999999999986 5889999988643211 12468899999999
Q ss_pred cCCCCcccceeEEee--CCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCC
Q 046275 913 IKHRNLVPLLGYCKV--GEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMK 990 (1176)
Q Consensus 913 l~h~niv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk 990 (1176)
++||||+++++++.+ ....|+||||+++|+|.+++.. .++++.+++.++.|++.||+|||+. +|+|||||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 999999999999986 5688999999999999876542 2689999999999999999999999 99999999
Q ss_pred CCCEEECCCCcEEEEeeccccccccccccccccccccCCcccCccccCCCC---CCchhhhHHHHHHHHHHHcCCCCCCC
Q 046275 991 SSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFR---CSTKGDVYSYGVVLLELLTGKRPTDS 1067 (1176)
Q Consensus 991 p~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvil~elltg~~P~~~ 1067 (1176)
|+||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++|||||||++|+|++|+.||..
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred HHHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 9999999999999999999987654322 224567999999999997655 47889999999999999999999864
Q ss_pred CCCCCccHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1068 ADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1068 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.. ...+........... +. ....+ ..+.+++.+||+.||++|||++|++++
T Consensus 243 ~~-----~~~~~~~~~~~~~~~---~~-~~~~~------~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 243 ER-----IMCLHSKIKSQALEF---PD-QPDIA------EDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp SS-----HHHHHHHHHHCCCCC---CS-SSCCC------HHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred cc-----HHHHHHHHhcccCCC---CC-ccccC------HHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 32 222222222221110 00 01111 135569999999999999999999875
No 110
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=9.9e-38 Score=354.69 Aligned_cols=267 Identities=23% Similarity=0.375 Sum_probs=204.0
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC---cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG---QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
.++|++.+.||+|+||.||+|++. +|+.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 357999999999999999999985 689999999865322 2245688999999999999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+++|+|.+++.........+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999986544445789999999999999999999999 99999999999999999999999999997654
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
.... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||..... .................
T Consensus 188 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~---- 258 (310)
T 2wqm_A 188 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIEQCDYPPL---- 258 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C---CHHHHHHHHHTTCSCCC----
T ss_pred CCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch---hHHHHHHHhhcccCCCC----
Confidence 3222 12345689999999999999999999999999999999999999975432 22333333322222111
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCC
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 1143 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~ 1143 (1176)
.....+ ..+.+++.+||+.||++|||+.++++.|+++++....
T Consensus 259 ~~~~~~------~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 259 PSDHYS------EELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp CTTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred cccccC------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 111111 1355699999999999999999999999999876543
No 111
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=7.6e-38 Score=351.78 Aligned_cols=255 Identities=22% Similarity=0.372 Sum_probs=202.8
Q ss_pred cCCCCCceEeEeCceEEEEEEECC-C-------CEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCee
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKD-G-------STVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEER 931 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 931 (1176)
++|.+.+.||+|+||+||+|++.. + ..||+|.+........+.+.+|+.++++++||||+++++++.+++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 568889999999999999998763 3 47999998766666667899999999999999999999999999999
Q ss_pred EEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCc--------EE
Q 046275 932 LLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFE--------AR 1003 (1176)
Q Consensus 932 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--------~k 1003 (1176)
++||||+++|+|.+++...+. .+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +|
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNKN---CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTGG---GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred EEEEECCCCCCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceee
Confidence 999999999999999987542 489999999999999999999999 9999999999999988877 99
Q ss_pred EEeeccccccccccccccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHh
Q 046275 1004 VSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQH 1082 (1176)
Q Consensus 1004 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~ 1082 (1176)
|+|||++...... ....||+.|+|||++.+ ..++.++||||||+++|||++|..|+.... .........
T Consensus 162 l~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~----~~~~~~~~~ 231 (289)
T 4fvq_A 162 LSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL----DSQRKLQFY 231 (289)
T ss_dssp ECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS----CHHHHHHHH
T ss_pred eccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc----chHHHHHHh
Confidence 9999998754322 23457899999999987 678999999999999999999655543221 111111111
Q ss_pred -hccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCC
Q 046275 1083 -AKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLD 1144 (1176)
Q Consensus 1083 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~ 1144 (1176)
......... +. .+.+++.+||+.||++|||+.+++++|+++..+.+.+
T Consensus 232 ~~~~~~~~~~--------~~------~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~ 280 (289)
T 4fvq_A 232 EDRHQLPAPK--------AA------ELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280 (289)
T ss_dssp HTTCCCCCCS--------SC------TTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC------
T ss_pred hccCCCCCCC--------CH------HHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCC
Confidence 111111111 11 2446999999999999999999999999997655443
No 112
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.3e-37 Score=358.57 Aligned_cols=245 Identities=23% Similarity=0.256 Sum_probs=205.1
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|++.+.||+|+||.||+|+++ +|+.||+|++.+. .....+.+.+|+.+++.++||||+++++++.+....|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57899999999999999999987 6899999998643 2234567889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+++|+|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 9999999999998764 689999999999999999999999 999999999999999999999999999986543
Q ss_pred ccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCccc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPEL 1095 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1095 (1176)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+ .......+...... ++
T Consensus 194 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~~~~--~p--- 258 (350)
T 1rdq_E 194 R-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-----PIQIYEKIVSGKVR--FP--- 258 (350)
T ss_dssp C-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC--CC---
T ss_pred C-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC-----HHHHHHHHHcCCCC--CC---
Confidence 2 234579999999999999999999999999999999999999996532 22233333222211 11
Q ss_pred ccCCCchHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 046275 1096 MKEDPNIEIELLQHLHVASACLDDRPWRRPT-----MIQVMAM 1133 (1176)
Q Consensus 1096 ~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt-----~~evl~~ 1133 (1176)
...+ ..+.+++.+||+.||.+||+ ++|+++|
T Consensus 259 -~~~~------~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 259 -SHFS------SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp -TTCC------HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred -CCCC------HHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 1111 13556999999999999998 8888765
No 113
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.8e-37 Score=349.35 Aligned_cols=261 Identities=23% Similarity=0.325 Sum_probs=199.8
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc--CHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ--GDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
++|++.+.||+|+||+||+|++. +++.||+|++...... ..+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57899999999999999999986 5899999998654322 23668899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAM 1016 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 1016 (1176)
|+++ ++.+.+.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9986 6666665432 2689999999999999999999999 9999999999999999999999999999866432
Q ss_pred cccccccccccCCcccCccccCCCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccC---
Q 046275 1017 DTHLSVSTLAGTPGYVPPEYYQSFR-CSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFD--- 1092 (1176)
Q Consensus 1017 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 1092 (1176)
.. ......||+.|+|||++.+.. ++.++||||+||++|||++|..||.........+........... .+..+
T Consensus 155 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~ 231 (292)
T 3o0g_A 155 VR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT-EEQWPSMT 231 (292)
T ss_dssp CS--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCC-TTTCTTGG
T ss_pred cc--cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCC-hhhhhhhc
Confidence 22 224567899999999997765 799999999999999999999886443211111111111111000 00000
Q ss_pred --------------cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1093 --------------PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1093 --------------~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.......+.. -..+.+++.+||+.||++|||++|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 232 KLPDYKPYPMYPATTSLVNVVPKL---NATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTC---CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccccccCCcchhhccccc---ChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000000111 1235579999999999999999999875
No 114
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.5e-38 Score=353.99 Aligned_cols=260 Identities=27% Similarity=0.434 Sum_probs=200.8
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeecc
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMR 939 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 939 (1176)
++|++.+.||+|+||+||+|++. ++.||+|++.. ....+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSS--TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecC--hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 46888999999999999999986 78899998853 2345678999999999999999999998873 4799999999
Q ss_pred CCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCc-EEEEeeccccccccccc
Q 046275 940 YGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFE-ARVSDFGMARLMSAMDT 1018 (1176)
Q Consensus 940 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~DfGla~~~~~~~~ 1018 (1176)
+|+|.+++..... ...+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TCBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 9999999986542 124788999999999999999999943228999999999999988876 799999999755322
Q ss_pred cccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcccccC
Q 046275 1019 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKE 1098 (1176)
Q Consensus 1019 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1176)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||...... ............ .+.....
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~-----~~~~~~~ 228 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP---AFRIMWAVHNGT-----RPPLIKN 228 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS---HHHHHHHHHTTC-----CCCCBTT
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc---HHHHHHHHhcCC-----CCCcccc
Confidence 13346899999999999999999999999999999999999999754321 111111111111 1111122
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCC
Q 046275 1099 DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLD 1144 (1176)
Q Consensus 1099 ~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~ 1144 (1176)
.+. .+.+++.+||+.||++|||+++++++|+++.+.....
T Consensus 229 ~~~------~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 268 (307)
T 2eva_A 229 LPK------PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGA 268 (307)
T ss_dssp CCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCT
T ss_pred cCH------HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCC
Confidence 221 3556999999999999999999999999998765443
No 115
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.6e-37 Score=351.36 Aligned_cols=273 Identities=25% Similarity=0.375 Sum_probs=208.7
Q ss_pred HHHhcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhc--CCCCcccceeEEeeC----C
Q 046275 856 LEATNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKI--KHRNLVPLLGYCKVG----E 929 (1176)
Q Consensus 856 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----~ 929 (1176)
....++|++.+.||+|+||.||+|++. ++.||||++... ....+.+|.+++... +||||+++++++... .
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 344568999999999999999999986 899999998532 334455666666655 899999999999887 7
Q ss_pred eeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcC-----CCCeeeCCCCCCCEEECCCCcEEE
Q 046275 930 ERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNC-----IPHIIHRDMKSSNVLLDENFEARV 1004 (1176)
Q Consensus 930 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl 1004 (1176)
..++||||+++|+|.++++.. .+++..++.++.|++.||+|||+.+ .++|+||||||+||+++.++.+||
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred ceEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 889999999999999999754 5899999999999999999999862 347999999999999999999999
Q ss_pred Eeeccccccccccccc--cccccccCCcccCccccCCCCCCch------hhhHHHHHHHHHHHcC----------CCCCC
Q 046275 1005 SDFGMARLMSAMDTHL--SVSTLAGTPGYVPPEYYQSFRCSTK------GDVYSYGVVLLELLTG----------KRPTD 1066 (1176)
Q Consensus 1005 ~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~------~DvwSlGvil~elltg----------~~P~~ 1066 (1176)
+|||+++......... ......||+.|+|||++.+..++.+ +|||||||++|||+|| +.||.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 9999997664432221 1234579999999999987766554 9999999999999999 66765
Q ss_pred CCCCCCccHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCC
Q 046275 1067 SADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSG 1142 (1176)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~ 1142 (1176)
...........+............++..... ......+.+++.+||+.||++|||+.+++++|+++.....
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 264 DLVPSDPSYEDMREIVCIKKLRPSFPNRWSS-----DECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGG-----SHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred hhcCCCCchhhhHHHHhhhccCccccccchh-----hHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 5443333333333333222222222111111 1223456779999999999999999999999999987654
No 116
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=364.18 Aligned_cols=253 Identities=23% Similarity=0.294 Sum_probs=195.5
Q ss_pred hcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCC--CCcccceeEEeeCCeeEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISG--QGDREFTAEMETIGKIKH--RNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV 934 (1176)
.++|++.+.||+|+||.||+|.+.+++.||||++..... ...+.+.+|+.++++++| |||+++++++..+...++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 356899999999999999999998899999999864332 223568899999999976 9999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
||+ .+|+|.+++...+ .+++.++..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++...
T Consensus 88 ~e~-~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp ECC-CSEEHHHHHHHSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred EeC-CCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 995 5789999998754 689999999999999999999999 999999999999997 5789999999998765
Q ss_pred cccccccccccccCCcccCccccCC-----------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhh
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQS-----------FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHA 1083 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~ 1083 (1176)
............||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... . .........
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---~-~~~~~~~~~ 234 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII---N-QISKLHAII 234 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC---S-HHHHHHHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh---h-HHHHHHHHh
Confidence 4433333345679999999999854 678999999999999999999999996432 1 111111111
Q ss_pred ccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 046275 1084 KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMF 1134 (1176)
Q Consensus 1084 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L 1134 (1176)
...... ......+ ..+.+++.+||+.||.+|||+.|++++-
T Consensus 235 ~~~~~~----~~~~~~~------~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 235 DPNHEI----EFPDIPE------KDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp CTTSCC----CCCCCSC------HHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred cCCccc----CCcccCC------HHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 111111 1111111 1355799999999999999999999873
No 117
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.1e-37 Score=350.57 Aligned_cols=261 Identities=29% Similarity=0.458 Sum_probs=194.9
Q ss_pred hcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
.++|++.+.||+|+||+||+|++. ..||+|++..... ...+.+.+|+.++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 357999999999999999999864 4699998864332 2235688999999999999999999965 5566899999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAM 1016 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 1016 (1176)
|+++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 100 WCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp CCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred ecCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccc
Confidence 999999999997553 3689999999999999999999999 9999999999999999999999999999866543
Q ss_pred cccccccccccCCcccCccccC---CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCc
Q 046275 1017 DTHLSVSTLAGTPGYVPPEYYQ---SFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDP 1093 (1176)
Q Consensus 1017 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1093 (1176)
..........||+.|+|||++. +..++.++||||+|+++|+|++|+.||..... ..................
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~- 248 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN----RDQIIEMVGRGSLSPDLS- 248 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC----HHHHHHHHHHTSCCCCTT-
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch----HHHHHHHhcccccCcchh-
Confidence 3333334567999999999986 66788899999999999999999999975431 122222222222111111
Q ss_pred ccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhh
Q 046275 1094 ELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 1139 (1176)
Q Consensus 1094 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~ 1139 (1176)
......+ ..+.+++.+||+.||++|||+.++++.|+++.+
T Consensus 249 ~~~~~~~------~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 249 KVRSNCP------KRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp SSCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hccccCC------HHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 1111122 245679999999999999999999999998864
No 118
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.2e-37 Score=358.55 Aligned_cols=249 Identities=22% Similarity=0.306 Sum_probs=204.1
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCeeEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEERLL 933 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 933 (1176)
.++|++.+.||+|+||+||+|+++ +|+.||+|++.+. .....+.+.+|..++..+ +||||+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 467999999999999999999987 4789999998653 234456688899999988 89999999999999999999
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
||||+++|+|.+++...+ .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 99 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 999999999999998654 689999999999999999999999 9999999999999999999999999999754
Q ss_pred ccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCc
Q 046275 1014 SAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDP 1093 (1176)
Q Consensus 1014 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1093 (1176)
.... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...+ .......+...... +++
T Consensus 172 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~~~~--~p~ 242 (353)
T 2i0e_A 172 IWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-----EDELFQSIMEHNVA--YPK 242 (353)
T ss_dssp CCTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC--CCT
T ss_pred ccCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhCCCC--CCC
Confidence 3221 12345689999999999999999999999999999999999999997543 22222222222211 111
Q ss_pred ccccCCCchHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 046275 1094 ELMKEDPNIEIELLQHLHVASACLDDRPWRRPT-----MIQVMAM 1133 (1176)
Q Consensus 1094 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt-----~~evl~~ 1133 (1176)
..+ ..+.+++.+||+.||++||+ ++++++|
T Consensus 243 ----~~s------~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 243 ----SMS------KEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ----TSC------HHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ----CCC------HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 111 13556999999999999995 5777665
No 119
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.2e-37 Score=347.71 Aligned_cols=252 Identities=29% Similarity=0.545 Sum_probs=202.1
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCH-------HHHHHHHHHHHhcCCCCcccceeEEeeCCee
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGD-------REFTAEMETIGKIKHRNLVPLLGYCKVGEER 931 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 931 (1176)
++|++.+.||+|+||+||+|++. +++.||+|++........ +.+.+|+.++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 57899999999999999999985 689999999865333221 56889999999999999999999986655
Q ss_pred EEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeCCCCCCCEEECCCCc-----EEE
Q 046275 932 LLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPH--IIHRDMKSSNVLLDENFE-----ARV 1004 (1176)
Q Consensus 932 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~-----~kl 1004 (1176)
++||||+++|+|.+++.... .++++..++.++.|++.||+|||+. + |+||||||+||+++.++. +||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred eEEEEecCCCCHHHHHhccc---CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 79999999999999887553 3689999999999999999999999 7 999999999999988776 999
Q ss_pred EeeccccccccccccccccccccCCcccCcccc--CCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHh
Q 046275 1005 SDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYY--QSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQH 1082 (1176)
Q Consensus 1005 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~ 1082 (1176)
+|||+++.... ......||+.|+|||++ ....++.++||||+|+++|||++|+.||....... ..+....
T Consensus 171 ~Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~~~~~~~ 242 (287)
T 4f0f_A 171 ADFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK---IKFINMI 242 (287)
T ss_dssp CCCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH---HHHHHHH
T ss_pred CCCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH---HHHHHHH
Confidence 99999975432 12456799999999998 45567899999999999999999999997654322 1222222
Q ss_pred hccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 046275 1083 AKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 1137 (1176)
Q Consensus 1083 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i 1137 (1176)
...... +......+ ..+.+++.+||+.||++|||++++++.|+++
T Consensus 243 ~~~~~~----~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 REEGLR----PTIPEDCP------PRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHSCCC----CCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred hccCCC----CCCCcccC------HHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 221111 11212222 1355699999999999999999999999864
No 120
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=9.8e-38 Score=358.61 Aligned_cols=265 Identities=25% Similarity=0.374 Sum_probs=211.8
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC--------CCCEEEEEEeeccCC-cCHHHHHHHHHHHHhc-CCCCcccceeEEeeC
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK--------DGSTVAIKKLIHISG-QGDREFTAEMETIGKI-KHRNLVPLLGYCKVG 928 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 928 (1176)
.++|++.+.||+|+||.||+|++. ++..||+|++..... ...+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 357899999999999999999873 467899999864322 2345688999999999 899999999999999
Q ss_pred CeeEEEEeeccCCCHHHHHhhcccc------------CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE
Q 046275 929 EERLLVYEYMRYGSLEDVLHNQKKV------------GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL 996 (1176)
Q Consensus 929 ~~~~lV~E~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll 996 (1176)
+..++||||+++|+|.+++...... ...+++.+++.++.|++.||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 9999999999999999999865421 22489999999999999999999999 99999999999999
Q ss_pred CCCCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccH
Q 046275 997 DENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNL 1075 (1176)
Q Consensus 997 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~ 1075 (1176)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||.... .
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~ 265 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----V 265 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-----H
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC-----H
Confidence 9999999999999987654433333344567889999999988889999999999999999999 999986543 2
Q ss_pred HHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCC
Q 046275 1076 VGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSG 1142 (1176)
Q Consensus 1076 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~ 1142 (1176)
............ +......+ ..+.+++.+||+.||.+|||+.+++++|+++.....
T Consensus 266 ~~~~~~~~~~~~-----~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 266 EELFKLLKEGHR-----MDKPANCT------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHHHHHHHHTCC-----CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCC-----CCCCccCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 222222222111 11111111 135569999999999999999999999999976533
No 121
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=7.7e-38 Score=349.18 Aligned_cols=254 Identities=24% Similarity=0.344 Sum_probs=206.2
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
.++|++.+.||+|+||.||+|+++ +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.++...++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 356899999999999999999987 689999999864332 334678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAM 1016 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 1016 (1176)
|+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 86 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred ecCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 999999999887543 689999999999999999999999 9999999999999999999999999999866443
Q ss_pred cccccccccccCCcccCccccCCCCC-CchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCccc
Q 046275 1017 DTHLSVSTLAGTPGYVPPEYYQSFRC-STKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPEL 1095 (1176)
Q Consensus 1017 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1095 (1176)
..........||+.|+|||++.+..+ +.++||||+|+++|+|++|+.||.........+..+... .. ... .
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~---~~~--~ 230 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK---KT---YLN--P 230 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT---CT---TST--T
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc---cc---ccC--c
Confidence 32223345679999999999987665 779999999999999999999997655333222222211 00 000 0
Q ss_pred ccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1096 MKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1096 ~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
....+ ..+.+++.+||+.||++|||++|++++
T Consensus 231 ~~~~~------~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 231 WKKID------SAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp GGGSC------HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred hhhcC------HHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 11111 134569999999999999999999875
No 122
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=6.1e-37 Score=353.42 Aligned_cols=275 Identities=23% Similarity=0.339 Sum_probs=216.9
Q ss_pred CHHHHHHHhcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHh--cCCCCcccceeEEeeC
Q 046275 851 TFADLLEATNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGK--IKHRNLVPLLGYCKVG 928 (1176)
Q Consensus 851 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~ 928 (1176)
+........++|.+.+.||+|+||.||+|++. |+.||+|++.. ...+.+.+|.+++.. ++||||+++++++...
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 33334455678999999999999999999985 89999999853 345667889999887 7899999999999877
Q ss_pred C----eeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHH--------hcCCCCeeeCCCCCCCEEE
Q 046275 929 E----ERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLH--------HNCIPHIIHRDMKSSNVLL 996 (1176)
Q Consensus 929 ~----~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp~NIll 996 (1176)
. ..++||||+++|+|.+++... .+++.+++.++.|++.||+||| +. +|+||||||+||++
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll 180 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILV 180 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEE
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEE
Confidence 6 789999999999999999754 5899999999999999999999 66 89999999999999
Q ss_pred CCCCcEEEEeeccccccccccccc--cccccccCCcccCccccCCC------CCCchhhhHHHHHHHHHHHcC-------
Q 046275 997 DENFEARVSDFGMARLMSAMDTHL--SVSTLAGTPGYVPPEYYQSF------RCSTKGDVYSYGVVLLELLTG------- 1061 (1176)
Q Consensus 997 ~~~~~~kl~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg------- 1061 (1176)
+.++.+||+|||++.......... ......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 181 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~ 260 (342)
T 1b6c_B 181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 260 (342)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcc
Confidence 999999999999998665433221 22455799999999999765 334789999999999999999
Q ss_pred ---CCCCCCCCCCCccHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHh
Q 046275 1062 ---KRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 1138 (1176)
Q Consensus 1062 ---~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~ 1138 (1176)
+.||............+............++... . .......+.+++.+||+.||++|||+.+++++|+++.
T Consensus 261 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~ 335 (342)
T 1b6c_B 261 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW----Q-SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335 (342)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG----G-TSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccccCccccCcCcccHHHHHHHHHHHHhCCCCcccc----c-chhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 7888765544444444444333322221111111 0 1123345677999999999999999999999999998
Q ss_pred hCCC
Q 046275 1139 AGSG 1142 (1176)
Q Consensus 1139 ~~~~ 1142 (1176)
...+
T Consensus 336 ~~~~ 339 (342)
T 1b6c_B 336 QQEG 339 (342)
T ss_dssp HTTC
T ss_pred HHhc
Confidence 6543
No 123
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.2e-37 Score=369.71 Aligned_cols=253 Identities=29% Similarity=0.429 Sum_probs=206.1
Q ss_pred hcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCC-eeEEEEee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGE-ERLLVYEY 937 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~E~ 937 (1176)
.++|++.+.||+|+||.||+|+++ |+.||||++... ...+.+.+|+.++++++||||+++++++.... ..|+||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSC--TTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCc--hHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 356888999999999999999986 789999998643 24567999999999999999999999987665 78999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD 1017 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 1017 (1176)
+++|+|.+++...+. ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 342 (450)
T ss_dssp CTTCBHHHHHHHHCT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-
Confidence 999999999987642 2478999999999999999999999 9999999999999999999999999999854321
Q ss_pred ccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCcccc
Q 046275 1018 THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELM 1096 (1176)
Q Consensus 1018 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1176)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... ....... .+. .....
T Consensus 343 ----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~---~~~-----~~~~p 408 (450)
T 1k9a_A 343 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVE---KGY-----KMDAP 408 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHHH---TTC-----CCCCC
T ss_pred ----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH---cCC-----CCCCC
Confidence 123367889999999999999999999999999999998 99999765422 2222221 111 11111
Q ss_pred cCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1097 KEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1097 ~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
...+. .+.+++.+||+.||++|||+.++++.|+++...
T Consensus 409 ~~~~~------~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 409 DGCPP------AVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp TTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CcCCH------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 12221 355699999999999999999999999998754
No 124
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.5e-37 Score=344.12 Aligned_cols=251 Identities=22% Similarity=0.298 Sum_probs=206.7
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
.++|++.+.||+|+||.||+|+++ ++..||+|++........+.+.+|++++++++||||+++++++.+....++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 356999999999999999999987 4789999999876666778899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE---CCCCcEEEEeeccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL---DENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~~~ 1014 (1176)
+++++|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 88 ~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 88 CTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp CCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred cCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 99999999998654 589999999999999999999999 99999999999999 788999999999998665
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
.... .....||+.|+|||++.+. ++.++||||+|+++|+|++|+.||.... ............. ..+..
T Consensus 161 ~~~~---~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~--~~~~~ 229 (277)
T 3f3z_A 161 PGKM---MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT-----DSEVMLKIREGTF--TFPEK 229 (277)
T ss_dssp TTSC---BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCC--CCCHH
T ss_pred Cccc---hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCC--CCCch
Confidence 4322 2456799999999998764 8999999999999999999999997543 1122222222111 11111
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.+...+ ..+.+++.+||+.||++|||+.+++++
T Consensus 230 ~~~~~~------~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 230 DWLNVS------PQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHTTSC------HHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hhhcCC------HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111 245569999999999999999999975
No 125
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=7.8e-38 Score=350.13 Aligned_cols=257 Identities=24% Similarity=0.373 Sum_probs=194.6
Q ss_pred hcCCCCCceEeEeCceEEEEEEECC----CCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKD----GSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLL 933 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 933 (1176)
.++|++.+.||+|+||.||+|++.. +..||+|++..... ...+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 3578899999999999999998753 45689998754322 23456889999999999999999999984 567899
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
||||+++|+|.+++...+ ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 93 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEECCTTEEHHHHHHHTT---TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccccc
Confidence 999999999999997653 2689999999999999999999999 9999999999999999999999999999876
Q ss_pred ccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1014 SAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1014 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
...... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ....... ....
T Consensus 167 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i~---~~~~----- 235 (281)
T 1mp8_A 167 EDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIE---NGER----- 235 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHH---TTCC-----
T ss_pred Cccccc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHHH---cCCC-----
Confidence 443221 2234457889999999988899999999999999999997 99999764321 2222211 1111
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhh
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 1139 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~ 1139 (1176)
.......+ ..+.+++.+||+.||++|||+.+++++|+++..
T Consensus 236 ~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 236 LPMPPNCP------PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 01111112 135569999999999999999999999999864
No 126
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.7e-37 Score=348.64 Aligned_cols=261 Identities=23% Similarity=0.333 Sum_probs=199.0
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccC--CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHIS--GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
++|++.+.||+|+||+||+|++.+|+.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5788999999999999999999889999999985432 22346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD 1017 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 1017 (1176)
+++ +|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 986 9999987653 2689999999999999999999999 99999999999999999999999999998654322
Q ss_pred ccccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccc---cc-----
Q 046275 1018 THLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLK---IS----- 1088 (1176)
Q Consensus 1018 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~----- 1088 (1176)
. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+.. ..+........... ..
T Consensus 155 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T 1ob3_A 155 R--KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPNSKNWPNVTEL 231 (288)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred c--ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHHCCCChhhchhhhcc
Confidence 1 1234578999999999876 45899999999999999999999999754311 11111111111000 00
Q ss_pred cccCcccccC--------CCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1089 DVFDPELMKE--------DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1089 ~~~~~~~~~~--------~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
..+++..... .+... ..+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 232 PKYDPNFTVYEPLPWESFLKGLD---ESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTCCTTCCCCCCCCGGGTCCSCC---HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccccCccHHHHhhhcC---HHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0111111100 01111 235579999999999999999999875
No 127
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=357.67 Aligned_cols=252 Identities=23% Similarity=0.322 Sum_probs=190.0
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ..+.+.+|++++++++||||+++++++......++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 3467999999999999999999987 58899999986432 34568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC---CCcEEEEeecccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE---NFEARVSDFGMARLM 1013 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfGla~~~ 1013 (1176)
|+++|+|.+++...+ .+++.+++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 129 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG----YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp CCCSCBHHHHHTTCS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred eCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 999999999997654 589999999999999999999999 9999999999999975 889999999999865
Q ss_pred ccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCc
Q 046275 1014 SAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDP 1093 (1176)
Q Consensus 1014 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1093 (1176)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ............. ...
T Consensus 202 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~~i~~~~~~--~~~ 272 (349)
T 2w4o_A 202 EHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD----QFMFRRILNCEYY--FIS 272 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH----HHHHHHHHTTCCC--CCT
T ss_pred Cccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc----HHHHHHHHhCCCc--cCC
Confidence 4322 124567999999999999999999999999999999999999999654311 1111222221111 111
Q ss_pred ccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1094 ELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1094 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
..+...+ ..+.+++.+||+.||++|||+.|++++
T Consensus 273 ~~~~~~~------~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 273 PWWDEVS------LNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTTTTSC------HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred chhhhCC------HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111122 135579999999999999999999885
No 128
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2e-37 Score=354.40 Aligned_cols=248 Identities=23% Similarity=0.315 Sum_probs=194.6
Q ss_pred cCCCCCceEeEeCceEEEEEEE----CCCCEEEEEEeeccC----CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCee
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKL----KDGSTVAIKKLIHIS----GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEER 931 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 931 (1176)
++|++.+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|+.++++++||||+++++++...+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 5789999999999999999998 368999999986532 22345578899999999999999999999999999
Q ss_pred EEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccc
Q 046275 932 LLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1011 (1176)
Q Consensus 932 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 1011 (1176)
|+||||+++|+|.+++...+ .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 97 YLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEECCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEeCCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 99999999999999998654 689999999999999999999999 99999999999999999999999999987
Q ss_pred ccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccccccc
Q 046275 1012 LMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVF 1091 (1176)
Q Consensus 1012 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1091 (1176)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+ ............. .+
T Consensus 170 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~--~~ 240 (327)
T 3a62_A 170 ESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN-----RKKTIDKILKCKL--NL 240 (327)
T ss_dssp -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHTCC--CC
T ss_pred ccccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCC--CC
Confidence 5432221 2245679999999999999899999999999999999999999997543 1222222222111 11
Q ss_pred CcccccCCCchHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 046275 1092 DPELMKEDPNIEIELLQHLHVASACLDDRPWRRP-----TMIQVMAM 1133 (1176)
Q Consensus 1092 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RP-----t~~evl~~ 1133 (1176)
++. .+ ..+.+++.+||+.||++|| ++.++++|
T Consensus 241 p~~----~~------~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 241 PPY----LT------QEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp CTT----SC------HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred CCC----CC------HHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 111 11 1355699999999999999 78888775
No 129
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=9.3e-38 Score=350.20 Aligned_cols=253 Identities=25% Similarity=0.372 Sum_probs=199.6
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC-CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS-GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
++|.+.+.||+|+||.||+|++. ++..||+|++.... ....+.+.+|++++++++||||+++++++.+....++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 46889999999999999999986 58999999986543 33457789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE---CCCCcEEEEeeccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL---DENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~~~ 1014 (1176)
+++|+|.+++......+..+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999999976644445799999999999999999999999 99999999999999 456789999999997654
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
.... .....||+.|+|||++.+ .++.++||||+|+++|||++|+.||.... .............. ....
T Consensus 179 ~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~pf~~~~-----~~~~~~~~~~~~~~--~~~~ 247 (285)
T 3is5_A 179 SDEH---STNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTS-----LEEVQQKATYKEPN--YAVE 247 (285)
T ss_dssp -----------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC--CCC-
T ss_pred Cccc---CcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCCCCCCCC-----HHHHHhhhccCCcc--cccc
Confidence 3222 245679999999999864 68999999999999999999999997543 11222111111110 0000
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
. ...+ ..+.+++.+||+.||++|||++|++++
T Consensus 248 ~-~~~~------~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 248 C-RPLT------PQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp --CCCC------HHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred c-CcCC------HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0011 135569999999999999999999875
No 130
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-38 Score=369.80 Aligned_cols=262 Identities=22% Similarity=0.229 Sum_probs=205.9
Q ss_pred HHHHHHHhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC---CcCHHHHHHHHHHHHhcCCCCcccceeEEee
Q 046275 852 FADLLEATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS---GQGDREFTAEMETIGKIKHRNLVPLLGYCKV 927 (1176)
Q Consensus 852 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 927 (1176)
+.+.....++|++.+.||+|+||+||+|+++ +|+.||+|++.+.. ....+.+.+|..++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444455678999999999999999999986 69999999986422 1223457889999999999999999999999
Q ss_pred CCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEee
Q 046275 928 GEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDF 1007 (1176)
Q Consensus 928 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 1007 (1176)
.+..|+||||+++|+|.+++...+ ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeec
Confidence 999999999999999999998653 2689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccccccCCcccCccccC-------CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHH
Q 046275 1008 GMARLMSAMDTHLSVSTLAGTPGYVPPEYYQ-------SFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVK 1080 (1176)
Q Consensus 1008 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~ 1080 (1176)
|+++........ .....+||+.|+|||++. ...++.++|||||||++|||++|+.||...+ ......
T Consensus 207 Gla~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-----~~~~~~ 280 (412)
T 2vd5_A 207 GSCLKLRADGTV-RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS-----TAETYG 280 (412)
T ss_dssp TTCEECCTTSCE-ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHH
T ss_pred hhheeccCCCcc-ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC-----HHHHHH
Confidence 999876543221 223468999999999987 4578999999999999999999999997543 112221
Q ss_pred HhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCC---CCHHHHHHH
Q 046275 1081 QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRR---PTMIQVMAM 1133 (1176)
Q Consensus 1081 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R---Pt~~evl~~ 1133 (1176)
.+......-.+ +......+ ..+.+++.+||+ +|.+| |+++|+++|
T Consensus 281 ~i~~~~~~~~~-p~~~~~~s------~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 281 KIVHYKEHLSL-PLVDEGVP------EEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHTHHHHCCC-C----CCC------HHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred HHHhcccCcCC-CccccCCC------HHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 11111000000 11111111 135669999999 99998 689999876
No 131
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=355.57 Aligned_cols=258 Identities=24% Similarity=0.412 Sum_probs=199.1
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCE----EEEEEeecc-CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGST----VAIKKLIHI-SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLL 933 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 933 (1176)
++|++.+.||+|+||+||+|++. +++. ||+|.+... .....+.+.+|+.++++++||||+++++++..+. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 57999999999999999999975 4544 567766432 3345678999999999999999999999998654 788
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
|+||+.+|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 94 v~~~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EECCCSSCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred EEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 999999999999998653 2689999999999999999999999 9999999999999999999999999999876
Q ss_pred ccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1014 SAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1014 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
.............||+.|+|||++.+..++.++|||||||++|||++ |+.||...... ..............
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~~~~~~----- 240 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGERLPQ----- 240 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCCCCC-----
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCCCCCC-----
Confidence 54443333344567889999999999999999999999999999999 99999765322 22222211111110
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
....+ ..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 241 ---~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 241 ---PPICT------IDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ---CTTBC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ---CccCC------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 01111 1355699999999999999999999999998743
No 132
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=5.8e-38 Score=357.66 Aligned_cols=270 Identities=22% Similarity=0.353 Sum_probs=212.5
Q ss_pred HHHHHhcCCCCCceEeEeCceEEEEEEEC------CCCEEEEEEeeccCCc-CHHHHHHHHHHHHhc-CCCCcccceeEE
Q 046275 854 DLLEATNGFHNDSLIGSGGFGDVYKAKLK------DGSTVAIKKLIHISGQ-GDREFTAEMETIGKI-KHRNLVPLLGYC 925 (1176)
Q Consensus 854 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~ 925 (1176)
......++|++.+.||+|+||+||+|++. +++.||+|.+...... ..+.+.+|+.+++++ +||||+++++++
T Consensus 21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 100 (316)
T 2xir_A 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 100 (316)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence 33344578999999999999999999852 4678999998653322 335688999999999 799999999998
Q ss_pred eeCC-eeEEEEeeccCCCHHHHHhhcccc------------CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCC
Q 046275 926 KVGE-ERLLVYEYMRYGSLEDVLHNQKKV------------GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSS 992 (1176)
Q Consensus 926 ~~~~-~~~lV~E~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~ 992 (1176)
...+ ..++||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +|+||||||+
T Consensus 101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~ 177 (316)
T 2xir_A 101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 177 (316)
T ss_dssp CCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred ecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccc
Confidence 7654 589999999999999999875421 11288999999999999999999999 9999999999
Q ss_pred CEEECCCCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCC
Q 046275 993 NVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFG 1071 (1176)
Q Consensus 993 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~ 1071 (1176)
||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|+|++ |+.||......
T Consensus 178 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~ 257 (316)
T 2xir_A 178 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257 (316)
T ss_dssp GEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred eEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh
Confidence 99999999999999999987654433333345668899999999998899999999999999999998 99999765422
Q ss_pred CccHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1072 DNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
. .+ ......... .......+ ..+.+++.+||+.||.+|||+.+++++|+++.+..
T Consensus 258 ~-~~---~~~~~~~~~-----~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 258 E-EF---CRRLKEGTR-----MRAPDYTT------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp H-HH---HHHHHHTCC-----CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred H-HH---HHHhccCcc-----CCCCCCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 1 11 111111111 01111111 13556999999999999999999999999987543
No 133
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.1e-36 Score=366.28 Aligned_cols=300 Identities=27% Similarity=0.338 Sum_probs=144.9
Q ss_pred CCccceeeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhh
Q 046275 217 CKNLQFLDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHL 296 (1176)
Q Consensus 217 l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~ 296 (1176)
+++|+.|++++|.++.++ .+..+++|++|+|++|.+++..+ +.++++|++|++++|.+++..+
T Consensus 45 l~~l~~L~l~~~~i~~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-------------- 107 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKSID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP-------------- 107 (466)
T ss_dssp HHTCCEEECCSSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--------------
T ss_pred hccccEEecCCCCCccCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--------------
Confidence 345555555555554432 34455555555555555554433 5555555555555555542211
Q ss_pred hhcCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCC
Q 046275 297 ADLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNL 376 (1176)
Q Consensus 297 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 376 (1176)
+..+++|++|++++|.+++..+ +.++++|++|++++|.++ .++. +..+++|++|+++ |.+.+.. .+.++++|
T Consensus 108 ~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L 179 (466)
T 1o6v_A 108 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS-DISA--LSGLTSLQQLSFG-NQVTDLK--PLANLTTL 179 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEEC-CCGG--GTTCTTCSEEEEE-ESCCCCG--GGTTCTTC
T ss_pred hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccC-CChh--hccCCcccEeecC-CcccCch--hhccCCCC
Confidence 1223455555555555553321 555666666666666655 3332 4556666666664 3333221 25556666
Q ss_pred CEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecc
Q 046275 377 ETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLW 456 (1176)
Q Consensus 377 ~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 456 (1176)
++|++++|.+++ ++. + ..+++|++|++++|.+++..| ++.+++|+.|++++|++++. ..+..+++|+.|+++
T Consensus 180 ~~L~l~~n~l~~-~~~-l--~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~ 251 (466)
T 1o6v_A 180 ERLDISSNKVSD-ISV-L--AKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLA 251 (466)
T ss_dssp CEEECCSSCCCC-CGG-G--GGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECC
T ss_pred CEEECcCCcCCC-Chh-h--ccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECC
Confidence 666666665542 211 1 123445555555555544333 44455555555555555432 234444555555555
Q ss_pred cccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccC
Q 046275 457 LNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRI 536 (1176)
Q Consensus 457 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 536 (1176)
+|.+.+..| +..+++|++|++++|++++..+ +..+++|+.|++++|++++..| ++.+++|++|+|++|++++..
T Consensus 252 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~ 325 (466)
T 1o6v_A 252 NNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDIS 325 (466)
T ss_dssp SSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCG
T ss_pred CCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCch
Confidence 555443322 4444455555555555543322 4444555555555555543222 444445555555555444333
Q ss_pred CCCCCCCCCCCEEEccCCCCc
Q 046275 537 PPELGDCRSLIWLDLNTNLFN 557 (1176)
Q Consensus 537 p~~~~~l~~L~~L~L~~N~l~ 557 (1176)
| +..+++|+.|++++|+++
T Consensus 326 ~--~~~l~~L~~L~l~~n~l~ 344 (466)
T 1o6v_A 326 P--VSSLTKLQRLFFYNNKVS 344 (466)
T ss_dssp G--GGGCTTCCEEECCSSCCC
T ss_pred h--hccCccCCEeECCCCccC
Confidence 3 344444444444444443
No 134
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.2e-37 Score=354.16 Aligned_cols=271 Identities=24% Similarity=0.364 Sum_probs=202.2
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcC---HHHHHHHHHHHHhcCCCCcccceeEEeeCCe----
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQG---DREFTAEMETIGKIKHRNLVPLLGYCKVGEE---- 930 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 930 (1176)
.++|++.+.||+|+||.||+|++. +++.||||++....... ...+.+|+.++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 357999999999999999999985 68899999986543332 2468899999999999999999999876543
Q ss_pred eEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccc
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1010 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 1010 (1176)
.|+||||+++|+|.++++..+ ++++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 499999999999999998654 689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccc-ccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccccc
Q 046275 1011 RLMSAMDTH-LSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISD 1089 (1176)
Q Consensus 1011 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 1089 (1176)
+........ .......||+.|+|||++.+..++.++||||||+++|||++|+.||.... .............
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-----~~~~~~~~~~~~~-- 236 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS-----PVSVAYQHVREDP-- 236 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHCCC--
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHhcCCC--
Confidence 866443221 12234578999999999999999999999999999999999999996543 1111111111110
Q ss_pred ccCcc-cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHH-HHHHHHhhCCCCCCCCccc
Q 046275 1090 VFDPE-LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM-AMFKEIQAGSGLDSQSTIA 1150 (1176)
Q Consensus 1090 ~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl-~~L~~i~~~~~~~~~~~~~ 1150 (1176)
..+. .....+ ..+.+++.+||+.||++||++.+++ +.+.++......+.+....
T Consensus 237 -~~~~~~~~~~~------~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~~~~~ 292 (311)
T 3ork_A 237 -IPPSARHEGLS------ADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLT 292 (311)
T ss_dssp -CCHHHHSTTCC------HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCSSCCCCC
T ss_pred -CCcccccCCCC------HHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCCCCcccc
Confidence 1111 111111 1355699999999999999666655 5577776665555544433
No 135
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.5e-37 Score=350.26 Aligned_cols=251 Identities=22% Similarity=0.307 Sum_probs=206.4
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc------CHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ------GDREFTAEMETIGKIKHRNLVPLLGYCKVGEERL 932 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 932 (1176)
++|++.+.||+|+||.||+|+++ +|+.||+|.+...... ..+.+.+|+.++++++||||+++++++.+....+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 46899999999999999999987 6899999998654322 3567899999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCC----cEEEEeec
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENF----EARVSDFG 1008 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~DfG 1008 (1176)
+||||+++++|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 92 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEECCCCSCBHHHHHHTCS----CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 9999999999999997653 689999999999999999999999 999999999999999887 79999999
Q ss_pred cccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccc
Q 046275 1009 MARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKIS 1088 (1176)
Q Consensus 1009 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1088 (1176)
++........ .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... ............
T Consensus 165 ~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~-- 234 (321)
T 2a2a_A 165 LAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQETLANITSVS-- 234 (321)
T ss_dssp TCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHTTC--
T ss_pred cceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhcc--
Confidence 9986654322 244579999999999999999999999999999999999999996532 122222222211
Q ss_pred cccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1089 DVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1089 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
..+++......+ ..+.+++.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 YDFDEEFFSHTS------ELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CCCCHHHHTTCC------HHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred cccChhhhcccC------HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 112222222222 135679999999999999999999875
No 136
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.6e-37 Score=360.03 Aligned_cols=254 Identities=25% Similarity=0.319 Sum_probs=197.5
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC---cCHHHHHHHHHH-HHhcCCCCcccceeEEeeCCeeEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG---QGDREFTAEMET-IGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
++|++.+.||+|+||+||+|+++ +++.||+|++.+... ...+.+.+|..+ ++.++||||+++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 56999999999999999999987 588999999865432 223456667766 5678999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+++|+|.+++...+ .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 118 ~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 118 LDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 99999999999998754 688999999999999999999999 99999999999999999999999999998543
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+ .......+..... .+++.
T Consensus 191 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~~~--~~~~~ 261 (373)
T 2r5t_A 191 EHN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-----TAEMYDNILNKPL--QLKPN 261 (373)
T ss_dssp CCC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB-----HHHHHHHHHHSCC--CCCSS
T ss_pred cCC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhccc--CCCCC
Confidence 222 12346689999999999999999999999999999999999999996533 2222222222211 11111
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhh
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 1139 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~ 1139 (1176)
.+ ..+.+++.+||+.||.+||++.+.++.+.++..
T Consensus 262 ----~~------~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~ 296 (373)
T 2r5t_A 262 ----IT------NSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVF 296 (373)
T ss_dssp ----SC------HHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGG
T ss_pred ----CC------HHHHHHHHHHcccCHHhCCCCCCCHHHHhCCcc
Confidence 11 135569999999999999998755555554443
No 137
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.6e-37 Score=363.00 Aligned_cols=206 Identities=22% Similarity=0.292 Sum_probs=177.6
Q ss_pred hcCCCCCceEeEe--CceEEEEEEEC-CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEE
Q 046275 859 TNGFHNDSLIGSG--GFGDVYKAKLK-DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLL 933 (1176)
Q Consensus 859 ~~~y~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 933 (1176)
.++|++.+.||+| +||+||+|+++ +|+.||||++..... ...+.+.+|+.++++++|||||++++++.+++..|+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3578999999999 99999999987 699999999865432 223567889999999999999999999999999999
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM--DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 9999999999999986532 2589999999999999999999999 9999999999999999999999999988654
Q ss_pred cccccc-----ccccccccCCcccCccccCC--CCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Q 046275 1014 SAMDTH-----LSVSTLAGTPGYVPPEYYQS--FRCSTKGDVYSYGVVLLELLTGKRPTDSAD 1069 (1176)
Q Consensus 1014 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~P~~~~~ 1069 (1176)
...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 322111 11133478999999999987 678999999999999999999999997654
No 138
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=359.76 Aligned_cols=247 Identities=22% Similarity=0.304 Sum_probs=197.5
Q ss_pred CceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeeccCCCH
Q 046275 865 DSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSL 943 (1176)
Q Consensus 865 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 943 (1176)
.+.||+|+||.||+|++. +|+.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 568999999999999986 6899999998765545567799999999999999999999999999999999999999999
Q ss_pred HHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE--CCCCcEEEEeecccccccccccccc
Q 046275 944 EDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL--DENFEARVSDFGMARLMSAMDTHLS 1021 (1176)
Q Consensus 944 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~DfGla~~~~~~~~~~~ 1021 (1176)
.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.......
T Consensus 174 ~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--- 244 (373)
T 2x4f_A 174 FDRIIDES---YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--- 244 (373)
T ss_dssp HHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---
T ss_pred HHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---
Confidence 99987543 2689999999999999999999999 99999999999999 6678999999999987654322
Q ss_pred ccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcccccCCCc
Q 046275 1022 VSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPN 1101 (1176)
Q Consensus 1022 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1101 (1176)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+ .......+..... .+.+..+...+
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-----~~~~~~~i~~~~~--~~~~~~~~~~~- 316 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN-----DAETLNNILACRW--DLEDEEFQDIS- 316 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCC--CSCSGGGTTSC-
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhccC--CCChhhhccCC-
Confidence 234579999999999999999999999999999999999999997543 1122222222111 11111111112
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1102 IEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1102 ~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
..+.+++.+||+.||++|||+.|++++
T Consensus 317 -----~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 317 -----EEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp -----HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -----HHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 245679999999999999999999985
No 139
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.3e-37 Score=344.23 Aligned_cols=252 Identities=24% Similarity=0.406 Sum_probs=203.1
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeC--CeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVG--EERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 935 (1176)
++|.+.+.||+|+||.||+|+++ ++.||+|++..... ...+.+.+|+.++++++||||+++++++.+. ...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 46889999999999999999986 88999999865332 2345689999999999999999999999877 7789999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPH--IIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
||+++|+|.+++.... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.++++|||++...
T Consensus 89 e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp ECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred cccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 9999999999998654 23589999999999999999999998 7 999999999999999999999999987543
Q ss_pred ccccccccccccccCCcccCccccCCCCCCc---hhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccc
Q 046275 1014 SAMDTHLSVSTLAGTPGYVPPEYYQSFRCST---KGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDV 1090 (1176)
Q Consensus 1014 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1090 (1176)
.. ....||+.|+|||++.+..++. ++||||||+++|||++|+.||.... ............
T Consensus 164 ~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~---- 227 (271)
T 3kmu_A 164 QS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS-----NMEIGMKVALEG---- 227 (271)
T ss_dssp SC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC-----HHHHHHHHHHSC----
T ss_pred cc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC-----hHHHHHHHHhcC----
Confidence 21 2346899999999997655444 8999999999999999999996543 111111111111
Q ss_pred cCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhh
Q 046275 1091 FDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 1139 (1176)
Q Consensus 1091 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~ 1139 (1176)
..+......+. .+.+++.+||+.||++|||++++++.|+++..
T Consensus 228 ~~~~~~~~~~~------~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 228 LRPTIPPGISP------HVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCCCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCCCCCCCCCH------HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11112222221 35569999999999999999999999998864
No 140
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.5e-37 Score=373.03 Aligned_cols=254 Identities=25% Similarity=0.327 Sum_probs=207.9
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
.++|.+.+.||+|+||.||+|+++ +|+.||+|++.+. .......+.+|+.+++.++|||||++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 357889999999999999999986 6999999998643 233456788999999999999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||++||+|.+++...+. ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 263 mEy~~gg~L~~~l~~~~~--~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQ--AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp ECCCCSCBHHHHHHSSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEcCCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 999999999999986542 2589999999999999999999999 99999999999999999999999999998765
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
.... .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ............. ..++
T Consensus 338 ~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~~~i~~~~--~~~p-- 409 (576)
T 2acx_A 338 EGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVERLVKEVP--EEYS-- 409 (576)
T ss_dssp TTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHHHHHHHCC--CCCC--
T ss_pred cCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHHHHhhccc--ccCC--
Confidence 4322 234589999999999999999999999999999999999999997654322 1222222221111 1111
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRP-----TMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RP-----t~~evl~~ 1133 (1176)
...+ ..+.+++.+||+.||.+|| +++|+++|
T Consensus 410 --~~~s------~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 410 --ERFS------PQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp --TTSC------HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred --ccCC------HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 1111 1355699999999999999 78998876
No 141
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-37 Score=348.67 Aligned_cols=263 Identities=24% Similarity=0.334 Sum_probs=208.6
Q ss_pred cCCCCCc-eEeEeCceEEEEEEEC---CCCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEE
Q 046275 860 NGFHNDS-LIGSGGFGDVYKAKLK---DGSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 860 ~~y~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
++|.+.+ .||+|+||.||+|++. ++..||+|++..... ...+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3455555 9999999999999864 577899999865322 2345688999999999999999999999 55678999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+++++|.+++.... ..+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 88 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EECCTTEEHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEeCCCCCHHHHHHhCC---ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 99999999999997543 3689999999999999999999999 99999999999999999999999999998765
Q ss_pred cccccc-cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1015 AMDTHL-SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1015 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
...... ......||+.|+|||++.+..++.++||||||+++|||++ |+.||..... . ...........
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~---~~~~~i~~~~~----- 231 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--P---EVMAFIEQGKR----- 231 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--H---HHHHHHHTTCC-----
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--H---HHHHHHhcCCc-----
Confidence 433221 1233457899999999988889999999999999999998 9999975431 1 12222222111
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCCC
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDS 1145 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~~ 1145 (1176)
+......+ ..+.+++.+||+.||++||++.+++++|+++..+.+...
T Consensus 232 ~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 232 MECPPECP------PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278 (287)
T ss_dssp CCCCTTCC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCcC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence 11111112 135569999999999999999999999999987655444
No 142
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.2e-37 Score=357.72 Aligned_cols=263 Identities=27% Similarity=0.430 Sum_probs=210.2
Q ss_pred hcCCCCCceEeEeCceEEEEEEECC-C-----CEEEEEEeeccCC-cCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKD-G-----STVAIKKLIHISG-QGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEE 930 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 930 (1176)
.++|.+.+.||+|+||.||+|++.. + ..||+|.+..... ...+.+.+|+.+++++ +||||+++++++...+.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 4678999999999999999999753 2 4799998865332 2345688999999999 89999999999999999
Q ss_pred eEEEEeeccCCCHHHHHhhcccc----------CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCC
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKV----------GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENF 1000 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 1000 (1176)
.++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCC
Confidence 99999999999999999865321 23579999999999999999999999 999999999999999999
Q ss_pred cEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHH
Q 046275 1001 EARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWV 1079 (1176)
Q Consensus 1001 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~ 1079 (1176)
.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||+| |..||...... .......
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~ 280 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-SKFYKLV 280 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-HHHHHHH
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-HHHHHHH
Confidence 999999999986654333333345567889999999988899999999999999999999 99998754322 1111111
Q ss_pred HHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhh
Q 046275 1080 KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 1139 (1176)
Q Consensus 1080 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~ 1139 (1176)
..... .......+ ..+.+++.+||+.||.+|||+.+++++|+++..
T Consensus 281 ~~~~~--------~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 281 KDGYQ--------MAQPAFAP------KNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HHTCC--------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCCC--------CCCCCCCC------HHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 11111 11111111 135569999999999999999999999998864
No 143
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.5e-37 Score=350.15 Aligned_cols=268 Identities=24% Similarity=0.308 Sum_probs=190.5
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
.++|++.+.||+|+||+||+|+++ +|+.||+|++..... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 457999999999999999999876 689999999865432 334678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhccc--cCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 937 YMRYGSLEDVLHNQKK--VGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|++ |+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 599999976532 123589999999999999999999999 99999999999999999999999999998664
Q ss_pred cccccccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccc---c---
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLK---I--- 1087 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~--- 1087 (1176)
.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+... .+........... .
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTCGGG
T ss_pred CCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHhhhh
Confidence 3221 1234578999999999976 468999999999999999999999997543111 1111111110000 0
Q ss_pred --ccccCcccccCCCchHH----------HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1088 --SDVFDPELMKEDPNIEI----------ELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1088 --~~~~~~~~~~~~~~~~~----------~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+.+......+.... .-..+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00000111000000000 01246679999999999999999999886
No 144
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=9.8e-38 Score=365.53 Aligned_cols=251 Identities=22% Similarity=0.300 Sum_probs=196.0
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcC--CCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISG--QGDREFTAEMETIGKIK--HRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lV~ 935 (1176)
.+|++.+.||+|+||.||+|.+.+++.||||++..... ...+.+.+|+.++++++ ||||+++++++..++..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 45899999999999999999988899999999864332 23456899999999996 599999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
| +.+++|.+++.... .+++.+++.++.||+.||.|||+. +|+||||||+||+++ ++.+||+|||+++....
T Consensus 136 E-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp E-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred e-cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9 56789999998654 688999999999999999999999 999999999999996 57899999999987654
Q ss_pred ccccccccccccCCcccCccccCC-----------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQS-----------FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAK 1084 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~ 1084 (1176)
...........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ...........
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~----~~~~~~~~~~~ 282 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII----NQISKLHAIID 282 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC----CHHHHHHHHHC
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh----HHHHHHHHHhC
Confidence 333323345679999999999864 368899999999999999999999996432 11111222211
Q ss_pred cccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1085 LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1085 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
......++ ...+ ..+.+++.+||+.||++|||+.|++++
T Consensus 283 ~~~~~~~~----~~~~------~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 283 PNHEIEFP----DIPE------KDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp TTSCCCCC----CCSC------HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccCCCC----ccch------HHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 11111111 1111 135679999999999999999999987
No 145
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.4e-37 Score=353.37 Aligned_cols=249 Identities=24% Similarity=0.323 Sum_probs=182.6
Q ss_pred CceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcC-CCCcccceeEEeeCCeeEEEEeeccCCC
Q 046275 865 DSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIK-HRNLVPLLGYCKVGEERLLVYEYMRYGS 942 (1176)
Q Consensus 865 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~~~~gs 942 (1176)
.+.||+|+||+||+|+++ +++.||||++.. .....+.+|+.+++.+. ||||+++++++.++...|+||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999986 689999999854 34567889999999997 9999999999999999999999999999
Q ss_pred HHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCC---cEEEEeecccccccccccc
Q 046275 943 LEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENF---EARVSDFGMARLMSAMDTH 1019 (1176)
Q Consensus 943 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfGla~~~~~~~~~ 1019 (1176)
|.+++...+ .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.......
T Consensus 93 L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~- 164 (325)
T 3kn6_A 93 LFERIKKKK----HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ- 164 (325)
T ss_dssp HHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred HHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-
Confidence 999998754 689999999999999999999999 999999999999997665 799999999986543222
Q ss_pred ccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCC--CccHHHHHHHhhccccccccCccccc
Q 046275 1020 LSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFG--DNNLVGWVKQHAKLKISDVFDPELMK 1097 (1176)
Q Consensus 1020 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1176)
......||+.|+|||++.+..++.++||||+||++|+|++|+.||...+.. ................. ++...+.
T Consensus 165 -~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~ 241 (325)
T 3kn6_A 165 -PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS--FEGEAWK 241 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC--CCSHHHH
T ss_pred -cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC--CCccccc
Confidence 234567899999999999999999999999999999999999999765422 12223333333332211 1111111
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1098 EDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1098 ~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
..+ ..+.+++.+||+.||++|||++|++++
T Consensus 242 ~~s------~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 242 NVS------QEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp TSC------HHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCC------HHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 111 245679999999999999999999865
No 146
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.8e-37 Score=345.29 Aligned_cols=247 Identities=26% Similarity=0.416 Sum_probs=201.3
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC---CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS---GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
.++|++.+.||+|+||+||+|++. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 457899999999999999999887 57799999885422 23356788999999999999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+++|+|.+++.... ++++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 88 ~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS----KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp ECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 99999999999998664 689999999999999999999999 99999999999999999999999999986543
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||...+ ............. .
T Consensus 161 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~------~ 225 (279)
T 3fdn_A 161 SSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-----YQETYKRISRVEF------T 225 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCC------C
T ss_pred ccc----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc-----HHHHHHHHHhCCC------C
Confidence 322 234578999999999999999999999999999999999999997543 2222222222111 1
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.....+ ..+.+++.+||+.||++|||++|++++
T Consensus 226 ~~~~~~------~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 226 FPDFVT------EGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CCTTSC------HHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCCcCC------HHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 111111 134569999999999999999999998
No 147
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.4e-37 Score=371.68 Aligned_cols=260 Identities=27% Similarity=0.392 Sum_probs=204.9
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeecc
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMR 939 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 939 (1176)
++|++.+.||+|+||.||+|+++.+..||||++.... ...+++.+|++++++++||||+++++++.+ +..++||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 5678889999999999999999888889999986533 346789999999999999999999999876 67899999999
Q ss_pred CCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccccc
Q 046275 940 YGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTH 1019 (1176)
Q Consensus 940 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 1019 (1176)
+|+|.+++.... +..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 262 ~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~- 335 (452)
T 1fmk_A 262 KGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY- 335 (452)
T ss_dssp TCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCce-
Confidence 999999997543 22589999999999999999999999 999999999999999999999999999986643221
Q ss_pred ccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCcccccC
Q 046275 1020 LSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKE 1098 (1176)
Q Consensus 1020 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1176)
.......+++.|+|||++.+..++.++|||||||++|||++ |+.||.... ..+.......+. .......
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~-----~~~~~~~ 405 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----NREVLDQVERGY-----RMPCPPE 405 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTC-----CCCCCTT
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCC-----CCCCCCC
Confidence 11234457889999999998899999999999999999999 999986543 112222221111 1111111
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCC
Q 046275 1099 DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 1143 (1176)
Q Consensus 1099 ~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~ 1143 (1176)
.+ ..+.+++.+||+.||++|||++++++.|+++....+.
T Consensus 406 ~~------~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~ 444 (452)
T 1fmk_A 406 CP------ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444 (452)
T ss_dssp SC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred CC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence 12 1355699999999999999999999999998765443
No 148
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.3e-37 Score=346.79 Aligned_cols=255 Identities=25% Similarity=0.410 Sum_probs=205.5
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEee---------
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKV--------- 927 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 927 (1176)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3457999999999999999999987 79999999986432 456789999999999999999998854
Q ss_pred -------CCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCC
Q 046275 928 -------GEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENF 1000 (1176)
Q Consensus 928 -------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 1000 (1176)
....++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCC
Confidence 445799999999999999998653 23689999999999999999999999 999999999999999999
Q ss_pred cEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHH
Q 046275 1001 EARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVK 1080 (1176)
Q Consensus 1001 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~ 1080 (1176)
.+||+|||++........ .....||+.|+|||++.+..++.++||||||+++|+|++|..|+... ..+..
T Consensus 160 ~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------~~~~~ 229 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-------SKFFT 229 (284)
T ss_dssp EEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------HHHHH
T ss_pred CEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------HHHHH
Confidence 999999999987654322 23457999999999999889999999999999999999999886321 11222
Q ss_pred HhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCCC
Q 046275 1081 QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDS 1145 (1176)
Q Consensus 1081 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~~ 1145 (1176)
......+...+ + ..+.+++.+||+.||++|||+.|++++++.+.+..+...
T Consensus 230 ~~~~~~~~~~~--------~------~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~~ 280 (284)
T 2a19_B 230 DLRDGIISDIF--------D------KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNE 280 (284)
T ss_dssp HHHTTCCCTTS--------C------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC------
T ss_pred HhhcccccccC--------C------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCccc
Confidence 22222211111 1 124569999999999999999999999999987665543
No 149
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=351.26 Aligned_cols=245 Identities=24% Similarity=0.323 Sum_probs=193.0
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc--CHHHHHHHHHHHHhc-CCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ--GDREFTAEMETIGKI-KHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|++.++||+|+||+||+|++. +|+.||||++...... .......|+..+.++ +||||+++++++.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999987 7999999987543222 223445566655555 8999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+ +++|.+++...+ ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 137 e~~-~~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG---ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp ECC-CCBHHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred ecc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 999 679999987654 3699999999999999999999999 999999999999999999999999999986643
Q ss_pred ccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCccc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPEL 1095 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1095 (1176)
... .....||+.|+|||++.+ .++.++|||||||++|||++|..|+... ..+.. ..... ..+..
T Consensus 210 ~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~-------~~~~~-~~~~~----~~~~~ 273 (311)
T 3p1a_A 210 AGA---GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG-------EGWQQ-LRQGY----LPPEF 273 (311)
T ss_dssp --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH-------HHHHH-HTTTC----CCHHH
T ss_pred CCC---CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc-------cHHHH-HhccC----CCccc
Confidence 222 244579999999999876 7899999999999999999997765321 11111 11111 11222
Q ss_pred ccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1096 MKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1096 ~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
....+ ..+.+++.+||+.||++|||++|++++
T Consensus 274 ~~~~~------~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 274 TAGLS------SELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HTTSC------HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccCCC------HHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 22222 245679999999999999999999875
No 150
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.1e-37 Score=344.87 Aligned_cols=259 Identities=25% Similarity=0.416 Sum_probs=209.2
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeecc
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMR 939 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 939 (1176)
++|++.+.||+|+||.||+|++.+++.||+|++... ....+.+.+|++++++++||||+++++++. ++..++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCC-cccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCC
Confidence 568889999999999999999988889999988643 334678999999999999999999999986 456899999999
Q ss_pred CCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccccc
Q 046275 940 YGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTH 1019 (1176)
Q Consensus 940 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 1019 (1176)
+++|.+++.... +..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 91 ~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 164 (279)
T 1qpc_A 91 NGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY- 164 (279)
T ss_dssp TCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-
T ss_pred CCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccc-
Confidence 999999997643 22589999999999999999999999 999999999999999999999999999987654322
Q ss_pred ccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCcccccC
Q 046275 1020 LSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKE 1098 (1176)
Q Consensus 1020 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1176)
.......+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ............ .......
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~~~~~~~-----~~~~~~~ 234 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-----NPEVIQNLERGY-----RMVRPDN 234 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTC-----CCCCCTT
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC-----HHHHHHHHhccc-----CCCCccc
Confidence 12234457889999999988889999999999999999999 999986543 112222221111 1111111
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCC
Q 046275 1099 DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSG 1142 (1176)
Q Consensus 1099 ~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~ 1142 (1176)
.+ ..+.+++.+|++.||++|||+.++++.|+++.....
T Consensus 235 ~~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 235 CP------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp CC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred cc------HHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 11 245569999999999999999999999999876543
No 151
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.3e-37 Score=345.18 Aligned_cols=246 Identities=23% Similarity=0.363 Sum_probs=181.2
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC---CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS---GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999875 68999999986432 233567889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+ ++++.+++...+ .+++.+++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 93 e~~-~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHTSS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 678888887654 689999999999999999999999 999999999999999999999999999976543
Q ss_pred ccccccccccccCCcccCccccCCCCC-CchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRC-STKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
... .....||+.|+|||++.+..+ +.++||||+|+++|+|++|+.||.... .............. ++
T Consensus 165 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~--~~-- 232 (275)
T 2eue_A 165 GNF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNISNGVYT--LP-- 232 (275)
T ss_dssp -------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCC--CC--
T ss_pred ccc---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCC--CC--
Confidence 222 234579999999999987765 789999999999999999999996533 22222222222110 11
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+ ..+.+++.+||+.||++|||++|++++
T Consensus 233 --~~~~------~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 233 --KFLS------PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp --TTSC------HHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred --ccCC------HHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 1111 134569999999999999999999876
No 152
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.5e-37 Score=351.18 Aligned_cols=259 Identities=22% Similarity=0.288 Sum_probs=199.7
Q ss_pred cCCCCC-ceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCeeEEEEe
Q 046275 860 NGFHND-SLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 860 ~~y~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
+.|.+. +.||+|+||+||+|++. +++.||||++........+.+.+|++++.++ +||||+++++++.+.+..|+|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 467774 78999999999999875 6899999999766656677899999999985 79999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCc---EEEEeecccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFE---ARVSDFGMARLM 1013 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfGla~~~ 1013 (1176)
|+++|+|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++...
T Consensus 92 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred cCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 999999999998764 689999999999999999999999 9999999999999988766 999999998765
Q ss_pred ccccc-----cccccccccCCcccCccccCC-----CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCcc---------
Q 046275 1014 SAMDT-----HLSVSTLAGTPGYVPPEYYQS-----FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNN--------- 1074 (1176)
Q Consensus 1014 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~--------- 1074 (1176)
..... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 244 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence 42211 111234569999999999865 56889999999999999999999999765432210
Q ss_pred -HHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1075 -LVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1075 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
............. .++...+...+ ..+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~i~~~~~--~~~~~~~~~~~------~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 245 CQNMLFESIQEGKY--EFPDKDWAHIS------CAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHCCC--CCCHHHHTTSC------HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHhccCc--ccCchhcccCC------HHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0111122221111 11111111111 245679999999999999999999986
No 153
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.1e-37 Score=361.61 Aligned_cols=273 Identities=22% Similarity=0.273 Sum_probs=213.7
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC-CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCC--eeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS-GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGE--ERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV~ 935 (1176)
++|.+.+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 46889999999999999999987 58999999986533 234567889999999999999999999988755 679999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE----CCCCcEEEEeecccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL----DENFEARVSDFGMAR 1011 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfGla~ 1011 (1176)
||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 89 e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp CCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred ecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999987543 22389999999999999999999999 99999999999999 778889999999998
Q ss_pred ccccccccccccccccCCcccCccccCC--------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhh
Q 046275 1012 LMSAMDTHLSVSTLAGTPGYVPPEYYQS--------FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHA 1083 (1176)
Q Consensus 1012 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~ 1083 (1176)
....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||............... ..
T Consensus 165 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~-~~ 240 (396)
T 4eut_A 165 ELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK-II 240 (396)
T ss_dssp ECCCGGG---SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHH-HH
T ss_pred EccCCCc---cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHH-Hh
Confidence 7654322 245679999999999864 56788999999999999999999999765433332222222 21
Q ss_pred ccccccc-------------cCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1084 KLKISDV-------------FDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1084 ~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
....... +.................+.+++.+||+.||++|||++++++.++++...
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 1111110 00111111122233444566899999999999999999999999998754
No 154
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3e-37 Score=349.35 Aligned_cols=262 Identities=23% Similarity=0.372 Sum_probs=205.0
Q ss_pred cCCCCCceEeEeCceEEEEEEE-----CCCCEEEEEEeecc-CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeC--Cee
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKL-----KDGSTVAIKKLIHI-SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVG--EER 931 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 931 (1176)
++|++.+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3588899999999999999984 36889999998643 333457789999999999999999999999876 668
Q ss_pred EEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccc
Q 046275 932 LLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1011 (1176)
Q Consensus 932 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 1011 (1176)
++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 99999999999999996553 2589999999999999999999999 99999999999999999999999999998
Q ss_pred cccccccc-ccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC----------CCCccHHHHHH
Q 046275 1012 LMSAMDTH-LSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSAD----------FGDNNLVGWVK 1080 (1176)
Q Consensus 1012 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~----------~~~~~~~~~~~ 1080 (1176)
........ .......||..|+|||++.+..++.++||||+|+++|+|++|+.|+.... ...........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 76543322 12245568889999999998889999999999999999999999864321 00111111111
Q ss_pred HhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHh
Q 046275 1081 QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 1138 (1176)
Q Consensus 1081 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~ 1138 (1176)
...... ........+ ..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 255 ~~~~~~-----~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 255 TLKEGK-----RLPCPPNCP------DEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHTTC-----CCCCCTTCC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhccC-----CCCCCCCCC------HHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111111 111111111 24567999999999999999999999999875
No 155
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.7e-37 Score=355.61 Aligned_cols=268 Identities=22% Similarity=0.324 Sum_probs=208.0
Q ss_pred cCCCCCceEeEeCceEEEEEEE-----CCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEe--eCCeeE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKL-----KDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCK--VGEERL 932 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 932 (1176)
++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4688999999999999999985 358899999987655555567899999999999999999999886 456689
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccc
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1012 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 1012 (1176)
+||||+++|+|.+++...+. .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 103 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEeecCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccccee
Confidence 99999999999999986532 589999999999999999999999 999999999999999999999999999987
Q ss_pred cccccccc-cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCC----------CccHHHHHHH
Q 046275 1013 MSAMDTHL-SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFG----------DNNLVGWVKQ 1081 (1176)
Q Consensus 1013 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~----------~~~~~~~~~~ 1081 (1176)
........ ......||+.|+|||++.+..++.++||||||+++|+|++|+.||...... ..........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 65433221 223456888999999999888999999999999999999999998642210 0011111111
Q ss_pred hhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCC
Q 046275 1082 HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLD 1144 (1176)
Q Consensus 1082 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~ 1144 (1176)
..... ........+ ..+.+++.+||+.||++|||+++++++|+++.......
T Consensus 257 ~~~~~-----~~~~~~~~~------~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 257 LEEGQ-----RLPAPPACP------AEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp HHTTC-----CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred hhccc-----CCCCCCccc------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 11111 111111111 23556999999999999999999999999987655433
No 156
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=357.47 Aligned_cols=268 Identities=15% Similarity=0.157 Sum_probs=209.2
Q ss_pred hcCCCCCceEeEeCceEEEEEEECC---------CCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCccc---------
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKD---------GSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVP--------- 920 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 920 (1176)
.++|.+.+.||+|+||.||+|++.. ++.||+|.+... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3679999999999999999999874 789999988642 46789999999999999988
Q ss_pred ------ceeEEee-CCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCC
Q 046275 921 ------LLGYCKV-GEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSN 993 (1176)
Q Consensus 921 ------l~~~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 993 (1176)
+++++.. +...|+||||+ +|+|.+++.... ...+++.+++.++.|++.||+|||+. +|+||||||+|
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~N 189 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAEN 189 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGG
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHH
Confidence 5667665 77889999999 899999998652 23699999999999999999999999 99999999999
Q ss_pred EEECCCC--cEEEEeeccccccccccccc-----cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCC
Q 046275 994 VLLDENF--EARVSDFGMARLMSAMDTHL-----SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD 1066 (1176)
Q Consensus 994 Ill~~~~--~~kl~DfGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~ 1066 (1176)
|+++.++ .+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 89999999998765432211 1134579999999999999999999999999999999999999997
Q ss_pred CCCCCCccHHHHHHHhhccccccccCccc-ccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCC
Q 046275 1067 SADFGDNNLVGWVKQHAKLKISDVFDPEL-MKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLD 1144 (1176)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~ 1144 (1176)
................. .......+... +...+ ..+.+++.+||+.||++|||++++++.|+++....+..
T Consensus 270 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 341 (352)
T 2jii_A 270 NCLPNTEDIMKQKQKFV-DKPGPFVGPCGHWIRPS------ETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVS 341 (352)
T ss_dssp GGTTCHHHHHHHHHHHH-HSCCCEECTTSCEECCC------HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred cCCcCHHHHHHHHHhcc-CChhhhhhhccccCCCc------HHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCC
Confidence 65422222222222111 11111111110 01111 24566999999999999999999999999998776543
No 157
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.3e-36 Score=340.84 Aligned_cols=252 Identities=23% Similarity=0.301 Sum_probs=204.8
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
.++|++.+.||+|+||.||+|.++ +|+.||+|++..... ...+.+.+|+.++++++||||+++++++.++...++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468999999999999999999986 589999999865332 23356889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCc---EEEEeeccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFE---ARVSDFGMARL 1012 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfGla~~ 1012 (1176)
||+++|+|.+.+...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||.+..
T Consensus 85 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 9999999999987664 689999999999999999999999 9999999999999976655 99999999976
Q ss_pred cccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1013 MSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1013 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
...... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||...+ .............. .+
T Consensus 158 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~--~~ 227 (284)
T 3kk8_A 158 VNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----QHRLYAQIKAGAYD--YP 227 (284)
T ss_dssp CCSSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCC--CC
T ss_pred cccCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc-----hhHHHHHHHhcccc--CC
Confidence 643322 244679999999999999999999999999999999999999986533 12222222222111 11
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.......+ ..+.+++.+||+.||++|||++|++++
T Consensus 228 ~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 228 SPEWDTVT------PEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TTTTTTSC------HHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred chhhcccC------HHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11111111 135569999999999999999999986
No 158
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.7e-37 Score=354.82 Aligned_cols=252 Identities=24% Similarity=0.331 Sum_probs=202.5
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCeeEEEEe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
.++|++.+.||+|+||.||+|+++ +|+.||+|.+..... ...+|++++.++ +||||+++++++.++...|+|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 457999999999999999999987 588999999865332 235688888888 79999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCC----CcEEEEeeccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDEN----FEARVSDFGMARL 1012 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfGla~~ 1012 (1176)
|+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||++.++ +.+||+|||+++.
T Consensus 97 ~~~gg~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~ 169 (342)
T 2qr7_A 97 LMKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169 (342)
T ss_dssp CCCSCBHHHHHHTCT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred CCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence 999999999998654 689999999999999999999999 99999999999998543 3599999999986
Q ss_pred cccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1013 MSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1013 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ................. +.
T Consensus 170 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~~~~i~~~~~~--~~ 243 (342)
T 2qr7_A 170 LRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP--DDTPEEILARIGSGKFS--LS 243 (342)
T ss_dssp CBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST--TSCHHHHHHHHHHCCCC--CC
T ss_pred CcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC--cCCHHHHHHHHccCCcc--cC
Confidence 643322 2245678999999999988889999999999999999999999997542 22233333333333221 11
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+...+ ..+.+++.+||+.||++|||+.+++++
T Consensus 244 ~~~~~~~s------~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 244 GGYWNSVS------DTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp STTTTTSC------HHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ccccccCC------HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11112122 135569999999999999999999987
No 159
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=6.5e-38 Score=358.26 Aligned_cols=266 Identities=24% Similarity=0.357 Sum_probs=212.9
Q ss_pred HHHhcCCCCCceEeEeCceEEEEEEEC------CCCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEeeC
Q 046275 856 LEATNGFHNDSLIGSGGFGDVYKAKLK------DGSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVG 928 (1176)
Q Consensus 856 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 928 (1176)
....++|++.+.||+|+||.||+|++. +++.||+|++..... .....+.+|+.++++++||||+++++++.+.
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 345578999999999999999999865 367899998864332 2234688999999999999999999999999
Q ss_pred CeeEEEEeeccCCCHHHHHhhcccc------CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcE
Q 046275 929 EERLLVYEYMRYGSLEDVLHNQKKV------GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEA 1002 (1176)
Q Consensus 929 ~~~~lV~E~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 1002 (1176)
...++||||+++|+|.+++...+.. ..++++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeE
Confidence 9999999999999999999865321 13578999999999999999999999 99999999999999999999
Q ss_pred EEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHH
Q 046275 1003 RVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQ 1081 (1176)
Q Consensus 1003 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~ 1081 (1176)
||+|||+++...............||+.|+|||++.+..++.++||||+|+++|+|++ |+.||.... .......
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~~ 252 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-----NEQVLRF 252 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-----HHHHHHH
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC-----HHHHHHH
Confidence 9999999986654433333344567899999999998899999999999999999999 899986543 1222222
Q ss_pred hhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1082 HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1082 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
........ .....+ ..+.+++.+||+.||++|||+.|++++|+++...
T Consensus 253 ~~~~~~~~-----~~~~~~------~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 253 VMEGGLLD-----KPDNCP------DMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp HHTTCCCC-----CCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred HHcCCcCC-----CCCCCC------HHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 22222111 111111 1355699999999999999999999999988653
No 160
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.5e-37 Score=371.32 Aligned_cols=249 Identities=24% Similarity=0.310 Sum_probs=195.9
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
.++|++.+.||+|+||.||+|++. +|+.||+|++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 357999999999999999999986 6899999998643 233345678899999999999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHH-NCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+|+..
T Consensus 227 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 99999999999998654 68999999999999999999998 7 8999999999999999999999999999754
Q ss_pred ccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCc
Q 046275 1014 SAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDP 1093 (1176)
Q Consensus 1014 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1093 (1176)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+ .............. +++
T Consensus 300 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~~~~--~p~ 370 (446)
T 4ejn_A 300 IKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILMEEIR--FPR 370 (446)
T ss_dssp CC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC--CCT
T ss_pred cCCC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-----HHHHHHHHHhCCCC--CCc
Confidence 3222 22345789999999999999999999999999999999999999996543 22222222221110 111
Q ss_pred ccccCCCchHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 046275 1094 ELMKEDPNIEIELLQHLHVASACLDDRPWRRP-----TMIQVMAM 1133 (1176)
Q Consensus 1094 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RP-----t~~evl~~ 1133 (1176)
..+ ..+.+++.+||+.||.+|| |++|+++|
T Consensus 371 ----~~~------~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 371 ----TLG------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp ----TSC------HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ----cCC------HHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 111 1355699999999999999 99999875
No 161
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.8e-37 Score=345.63 Aligned_cols=257 Identities=22% Similarity=0.373 Sum_probs=202.2
Q ss_pred hcCCCCCceEeEeCceEEEEEEECC----CCEEEEEEeeccC-CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKD----GSTVAIKKLIHIS-GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLL 933 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 933 (1176)
.++|.+.+.||+|+||+||+|++.. +..||+|.+.... ....+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 3578899999999999999998653 2359999886532 2334678899999999999999999999865 45689
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
||||+++++|.+++...+ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 90 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp EEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred EEecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 999999999999997653 2589999999999999999999999 9999999999999999999999999999866
Q ss_pred ccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1014 SAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1014 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
...... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ...............
T Consensus 164 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~--~~~~~~~~~~~~~~~----- 235 (281)
T 3cc6_A 164 EDEDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVIGVLEKGDRLPK----- 235 (281)
T ss_dssp ----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG--GGHHHHHHHTCCCCC-----
T ss_pred cccccc-ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh--HHHHHHHhcCCCCCC-----
Confidence 443221 2234567889999999988899999999999999999998 9999975432 122222211111111
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhh
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 1139 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~ 1139 (1176)
....+ ..+.+++.+||+.||++|||+.|++++|+++.+
T Consensus 236 ---~~~~~------~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 236 ---PDLCP------PVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp ---CTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCC------HHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 11111 135569999999999999999999999999865
No 162
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.8e-37 Score=354.76 Aligned_cols=263 Identities=25% Similarity=0.287 Sum_probs=202.5
Q ss_pred HHHHhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc-----CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeC
Q 046275 855 LLEATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI-----SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVG 928 (1176)
Q Consensus 855 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 928 (1176)
+....++|.+.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3456678999999999999999999986 6889999988643 234456789999999999999999999999999
Q ss_pred CeeEEEEeeccCCCHHHHHhhcccc------------------------------------CcccCHHHHHHHHHHHHHH
Q 046275 929 EERLLVYEYMRYGSLEDVLHNQKKV------------------------------------GIKLNWAARRKIAIGSARG 972 (1176)
Q Consensus 929 ~~~~lV~E~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~ia~~ 972 (1176)
...++||||+++|+|.+++...... ...+++..++.++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999999632110 1235678889999999999
Q ss_pred HHHHHhcCCCCeeeCCCCCCCEEECCCC--cEEEEeecccccccccccc--ccccccccCCcccCccccCC--CCCCchh
Q 046275 973 LAFLHHNCIPHIIHRDMKSSNVLLDENF--EARVSDFGMARLMSAMDTH--LSVSTLAGTPGYVPPEYYQS--FRCSTKG 1046 (1176)
Q Consensus 973 L~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~DfGla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~ 1046 (1176)
|+|||+. +|+||||||+||+++.++ .+||+|||+++........ .......||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998766 8999999999865432221 12345679999999999865 6788999
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCC
Q 046275 1047 DVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPT 1126 (1176)
Q Consensus 1047 DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt 1126 (1176)
|||||||++|||++|+.||..... ............. +........+ ..+.+++.+||+.||.+|||
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVND-----ADTISQVLNKKLC--FENPNYNVLS------PLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHCCCC--TTSGGGGGSC------HHHHHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCh-----HHHHHHHHhcccc--cCCcccccCC------HHHHHHHHHHcCCChhHCCC
Confidence 999999999999999999965431 1112221111110 1111111111 23557999999999999999
Q ss_pred HHHHHHH
Q 046275 1127 MIQVMAM 1133 (1176)
Q Consensus 1127 ~~evl~~ 1133 (1176)
+.+++++
T Consensus 325 ~~~~l~h 331 (345)
T 3hko_A 325 AMRALQH 331 (345)
T ss_dssp HHHHHHS
T ss_pred HHHHhcC
Confidence 9999986
No 163
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.4e-37 Score=367.57 Aligned_cols=247 Identities=25% Similarity=0.397 Sum_probs=205.0
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC---CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS---GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|.+.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+..|+||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57899999999999999999987 79999999986432 233467889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+++|+|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 96 E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 96 EYVSGGELFDYICKNG----RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp ECCSSEEHHHHTTSSS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 9999999999997654 689999999999999999999999 999999999999999999999999999987654
Q ss_pred ccccccccccccCCcccCccccCCCCC-CchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRC-STKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
.. .....+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.... .............. . +
T Consensus 169 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----~~~~~~~i~~~~~~--~-p- 236 (476)
T 2y94_A 169 GE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-----VPTLFKKICDGIFY--T-P- 236 (476)
T ss_dssp TC---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----SHHHHHHHHTTCCC--C-C-
T ss_pred cc---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC-----HHHHHHHHhcCCcC--C-C-
Confidence 32 2245679999999999988765 689999999999999999999997543 12222222222110 0 1
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+ ..+.+++.+||+.||++|||++|++++
T Consensus 237 --~~~s------~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 237 --QYLN------PSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp --TTCC------HHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred --ccCC------HHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 1111 135669999999999999999999986
No 164
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=358.36 Aligned_cols=267 Identities=16% Similarity=0.172 Sum_probs=201.0
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC----CCCEEEEEEeeccCCc-----------CHHHHHHHHHHHHhcCCCCccccee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK----DGSTVAIKKLIHISGQ-----------GDREFTAEMETIGKIKHRNLVPLLG 923 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~ 923 (1176)
.++|.+.+.||+|+||.||+|++. ++..||+|+....... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357999999999999999999986 5788999988654321 1123667888899999999999999
Q ss_pred EEee----CCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCC
Q 046275 924 YCKV----GEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDEN 999 (1176)
Q Consensus 924 ~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 999 (1176)
++.. ....|+||||+ +++|.+++...+ .+++.+++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccC
Confidence 9987 77899999999 899999998664 689999999999999999999999 99999999999999887
Q ss_pred C--cEEEEeeccccccccccccc-----cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCC
Q 046275 1000 F--EARVSDFGMARLMSAMDTHL-----SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD 1072 (1176)
Q Consensus 1000 ~--~~kl~DfGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~ 1072 (1176)
+ .+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence 7 99999999998764332211 1244579999999999999899999999999999999999999996432111
Q ss_pred ccHHHHHHHhhccccccccCccccc-CCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1073 NNLVGWVKQHAKLKISDVFDPELMK-EDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1073 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
. ............+...+...... ..+ ..+.+++.+||+.||++|||++++++.|++....
T Consensus 268 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 329 (345)
T 2v62_A 268 V-AVQTAKTNLLDELPQSVLKWAPSGSSC------CEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIP 329 (345)
T ss_dssp H-HHHHHHHHHHHTTTHHHHHHSCTTSCC------HHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred H-HHHHHHHhhcccccHHHHhhccccccH------HHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCc
Confidence 1 11111111111111111110000 111 1456699999999999999999999999987653
No 165
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1e-37 Score=376.83 Aligned_cols=258 Identities=27% Similarity=0.433 Sum_probs=210.6
Q ss_pred cCCCCCceEeEeCceEEEEEEECC-CCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeec
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKD-GSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYM 938 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 938 (1176)
++|++.+.||+|+||.||+|+++. +..||||++... ....+++.+|+.++++++||||+++++++......|+||||+
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 457888999999999999999874 889999998643 345678999999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccccc
Q 046275 939 RYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDT 1018 (1176)
Q Consensus 939 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 1018 (1176)
++|+|.++++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 299 ~~g~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 372 (495)
T 1opk_A 299 TYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT- 372 (495)
T ss_dssp TTCBHHHHHHHSCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-
T ss_pred CCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCc-
Confidence 99999999986532 3589999999999999999999999 99999999999999999999999999998764322
Q ss_pred cccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCccccc
Q 046275 1019 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMK 1097 (1176)
Q Consensus 1019 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1176)
........+++.|+|||++.+..++.++|||||||++|||++ |+.||...+.. ........ . .......
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~---~-----~~~~~~~ 442 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK---D-----YRMERPE 442 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHT---T-----CCCCCCT
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc---C-----CCCCCCC
Confidence 112234456789999999998899999999999999999999 99998765422 22222211 1 1111111
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1098 EDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1098 ~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
..+ ..+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 443 ~~~------~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 443 GCP------EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp TCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CCC------HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 112 1355699999999999999999999999987643
No 166
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=5.3e-37 Score=369.71 Aligned_cols=256 Identities=24% Similarity=0.327 Sum_probs=207.8
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC---CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS---GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|.+.+.||+|+||+||+|+++ +|+.||+|++.+.. ....+.+.+|++++++++||||+++++++.+....|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 57889999999999999999986 69999999986432 234567889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||++||+|.+++.........+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999987654344699999999999999999999999 999999999999999999999999999987654
Q ss_pred ccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCccc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPEL 1095 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1095 (1176)
... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||....... .............. .++
T Consensus 342 ~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~i~~~~~--~~p--- 413 (543)
T 3c4z_A 342 GQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRVLEQAV--TYP--- 413 (543)
T ss_dssp TCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHHHHHCCC--CCC---
T ss_pred CCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHHHhhccc--CCC---
Confidence 322 1234589999999999999999999999999999999999999997654221 22233322222211 111
Q ss_pred ccCCCchHHHHHHHHHHHHHhccCCCCCCCCH-----HHHHHH
Q 046275 1096 MKEDPNIEIELLQHLHVASACLDDRPWRRPTM-----IQVMAM 1133 (1176)
Q Consensus 1096 ~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~-----~evl~~ 1133 (1176)
...+ ..+.+++.+||+.||++||++ +++++|
T Consensus 414 -~~~s------~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 414 -DKFS------PASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp -TTSC------HHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred -cccC------HHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 1111 134569999999999999975 666653
No 167
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=6.9e-37 Score=345.62 Aligned_cols=262 Identities=27% Similarity=0.424 Sum_probs=202.5
Q ss_pred cCCCCCceEeEeCceEEEEEEECC----CCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEE-eeCCeeEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKD----GSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYC-KVGEERLL 933 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~l 933 (1176)
.+|.+.+.||+|+||+||+|++.+ +..||+|++..... ...+.+.+|+.++++++||||+++++++ ..+...++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 468888999999999999998753 23578888764332 2345688999999999999999999985 45567899
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 105 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp EEECCTTCBHHHHHHCTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred EEeCCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccc
Confidence 999999999999997643 3589999999999999999999999 9999999999999999999999999999866
Q ss_pred cccccc--ccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccc
Q 046275 1014 SAMDTH--LSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDV 1090 (1176)
Q Consensus 1014 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1090 (1176)
...... .......||+.|+|||.+.+..++.++||||+|+++|+|++ |.+||...... ............
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~----- 251 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRL----- 251 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THHHHHHTTCCC-----
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHHhcCCCC-----
Confidence 443221 12234567889999999998899999999999999999999 55555443321 122111111110
Q ss_pred cCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCC
Q 046275 1091 FDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 1143 (1176)
Q Consensus 1091 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~ 1143 (1176)
..+ ...+ ..+.+++.+||+.||++|||+.++++.|+++......
T Consensus 252 ~~~---~~~~------~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 252 LQP---EYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp CCC---TTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred CCC---ccCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 111 1111 1356699999999999999999999999999876443
No 168
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.5e-37 Score=348.95 Aligned_cols=42 Identities=36% Similarity=0.701 Sum_probs=38.7
Q ss_pred CCChHHHHHHHHHHhcCCCCCCCCCCCCCCCCcc--cceeEeCC
Q 046275 24 SSPNKDLQQLLSFKAALPNPSVLPNWSPNQNPCG--FKGVSCKA 65 (1176)
Q Consensus 24 ~~~~~~~~~ll~~k~~~~~~~~l~~w~~~~~cC~--W~gv~C~~ 65 (1176)
+|.++|+.||++||+++.||..+++|..++|||. |.||+|+.
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~ 45 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDT 45 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECC
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCC
Confidence 5789999999999999998888999998899998 99999975
No 169
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.3e-37 Score=353.97 Aligned_cols=253 Identities=24% Similarity=0.350 Sum_probs=198.3
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEeeCC-------
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVGE------- 929 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 929 (1176)
.++|++.+.||+|+||.||+|+++ +|+.||||++..... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356899999999999999999987 799999999865433 33467899999999999999999999986543
Q ss_pred --------------------------------------------------eeEEEEeeccCCCHHHHHhhccccCcccCH
Q 046275 930 --------------------------------------------------ERLLVYEYMRYGSLEDVLHNQKKVGIKLNW 959 (1176)
Q Consensus 930 --------------------------------------------------~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~ 959 (1176)
..++||||+++|+|.+++...... ...++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL-EDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG-GGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc-cchhh
Confidence 379999999999999999876532 34677
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccccc----------ccccccccCC
Q 046275 960 AARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTH----------LSVSTLAGTP 1029 (1176)
Q Consensus 960 ~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~----------~~~~~~~gt~ 1029 (1176)
..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 88999999999999999999 9999999999999999999999999999876543221 1123457999
Q ss_pred cccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcccccCCCchHHHHHHH
Q 046275 1030 GYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQH 1109 (1176)
Q Consensus 1030 ~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1109 (1176)
.|+|||++.+..++.++||||+||++|||++|..|+.. .............. .. .......+
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-------~~~~~~~~~~~~~~-----~~------~~~~~~~~ 302 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-------RVRIITDVRNLKFP-----LL------FTQKYPQE 302 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-------HHHHHHHHHTTCCC-----HH------HHHHCHHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-------HHHHHHHhhccCCC-----cc------cccCChhH
Confidence 99999999999999999999999999999998776321 11111111111111 10 01112244
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1110 LHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1110 ~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.+++.+||+.||++|||++|++++
T Consensus 303 ~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 303 HMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHccCCCCcCCCHHHHhhc
Confidence 679999999999999999999875
No 170
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.6e-37 Score=350.63 Aligned_cols=264 Identities=27% Similarity=0.445 Sum_probs=207.8
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEE--EEEEeecc-CCcCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCeeEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTV--AIKKLIHI-SGQGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 934 (1176)
++|++.+.||+|+||.||+|++. ++..+ |+|++... .....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 56899999999999999999876 45544 88887642 233456789999999999 899999999999999999999
Q ss_pred EeeccCCCHHHHHhhcc------------ccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcE
Q 046275 935 YEYMRYGSLEDVLHNQK------------KVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEA 1002 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 1002 (1176)
|||+++|+|.+++...+ .....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999998654 2234689999999999999999999999 99999999999999999999
Q ss_pred EEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHH
Q 046275 1003 RVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQ 1081 (1176)
Q Consensus 1003 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~ 1081 (1176)
||+|||+++...... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||.... .......
T Consensus 182 kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-----~~~~~~~ 253 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----CAELYEK 253 (327)
T ss_dssp EECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHH
T ss_pred EEcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc-----HHHHHHH
Confidence 999999987433211 1234457889999999988889999999999999999998 999996543 2222222
Q ss_pred hhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCCC
Q 046275 1082 HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDS 1145 (1176)
Q Consensus 1082 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~~ 1145 (1176)
..... ........+ ..+.+++.+||+.||++|||+++++++|+++........
T Consensus 254 ~~~~~-----~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~ 306 (327)
T 1fvr_A 254 LPQGY-----RLEKPLNCD------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYV 306 (327)
T ss_dssp GGGTC-----CCCCCTTBC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSB
T ss_pred hhcCC-----CCCCCCCCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCcc
Confidence 22211 111111111 135669999999999999999999999999987755444
No 171
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.4e-37 Score=344.89 Aligned_cols=263 Identities=28% Similarity=0.391 Sum_probs=205.0
Q ss_pred CCCCCceEeEeCceEEEEEEECC-C---CEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCee-EEE
Q 046275 861 GFHNDSLIGSGGFGDVYKAKLKD-G---STVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEER-LLV 934 (1176)
Q Consensus 861 ~y~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lV 934 (1176)
.|...+.||+|+||+||+|++.+ + ..||+|++..... ...+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 45667899999999999998642 2 2689998864332 2345688999999999999999999999776655 999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+.+|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ---RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 99999999999997643 3689999999999999999999999 99999999999999999999999999998654
Q ss_pred cccc--cccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1015 AMDT--HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1015 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
.... ........+|+.|+|||.+.+..++.++||||+|+++|+|++|..|+.... .................
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~----- 249 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-DPFDLTHFLAQGRRLPQ----- 249 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CGGGHHHHHHTTCCCCC-----
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC-CHHHHHHHhhcCCCCCC-----
Confidence 3321 112234568899999999999999999999999999999999666643322 12222222221111111
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCC
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLD 1144 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~ 1144 (1176)
....+ ..+.+++.+||+.||.+|||++++++.|+++......+
T Consensus 250 ---~~~~~------~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 250 ---PEYCP------DSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp ---CTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred ---Cccch------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 11111 13566999999999999999999999999998765443
No 172
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.5e-37 Score=347.03 Aligned_cols=261 Identities=23% Similarity=0.302 Sum_probs=199.4
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcC---HHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQG---DREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
.++|.+.+.||+|+||.||+|++. +++.||+|++....... .+.+.+|+.++++++||||+++++++..++..|+|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468999999999999999999986 68889999886543222 35688999999999999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+++++|.+++...+ ++++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG----PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 99999999999998654 689999999999999999999999 99999999999999999999999999997654
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
.... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.... .. ............ ...
T Consensus 186 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~-~~~~~~~~~~~~--~~~ 256 (309)
T 2h34_A 186 DEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ-----LS-VMGAHINQAIPR--PST 256 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH-----HH-HHHHHHHSCCCC--GGG
T ss_pred cccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch-----HH-HHHHHhccCCCC--ccc
Confidence 3221 12235578999999999999899999999999999999999999996532 11 111111111110 011
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHHHhhCC
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRP-TMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RP-t~~evl~~L~~i~~~~ 1141 (1176)
.....+. .+.+++.+||+.||++|| |++++++.|++..+..
T Consensus 257 ~~~~~~~------~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 257 VRPGIPV------AFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp TSTTCCT------HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred cCCCCCH------HHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 1112222 345699999999999999 9999999999876544
No 173
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.1e-37 Score=350.12 Aligned_cols=264 Identities=20% Similarity=0.352 Sum_probs=197.6
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC----CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCe-
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK----DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEE- 930 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 930 (1176)
..++|.+.+.||+|+||.||+|++. ++..||+|++..... ...+.+.+|+.++++++||||+++++++.+...
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4567899999999999999999865 245899998864322 223568899999999999999999999877553
Q ss_pred ----eEEEEeeccCCCHHHHHhhcc--ccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEE
Q 046275 931 ----RLLVYEYMRYGSLEDVLHNQK--KVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARV 1004 (1176)
Q Consensus 931 ----~~lV~E~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 1004 (1176)
.++||||+++|+|.+++.... .....+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEE
Confidence 499999999999999995432 2234699999999999999999999999 9999999999999999999999
Q ss_pred EeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhh
Q 046275 1005 SDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHA 1083 (1176)
Q Consensus 1005 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 1083 (1176)
+|||+++...............+++.|+|||.+.+..++.++||||||+++|+|++ |+.||...... ...... .
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~---~ 263 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYDYL---L 263 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHH---H
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHHH---H
Confidence 99999987654333223344567889999999999899999999999999999999 88998754321 121111 1
Q ss_pred ccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1084 KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1084 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
.... +......+ ..+.+++.+||+.||.+|||+.+++++|+++...
T Consensus 264 ~~~~-----~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 264 HGHR-----LKQPEDCL------DELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp TTCC-----CCCBTTCC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCC-----CCCCcccc------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1111 11111111 1356699999999999999999999999998764
No 174
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.7e-36 Score=340.38 Aligned_cols=266 Identities=23% Similarity=0.314 Sum_probs=209.6
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEE-eeCCeeEEEEe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYC-KVGEERLLVYE 936 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV~E 936 (1176)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ..+++.+|+.++++++|++++..+.++ ......++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 468999999999999999999984 78999999876433 335688999999999988877766655 66778899999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE---CCCCcEEEEeecccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL---DENFEARVSDFGMARLM 1013 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~~ 1013 (1176)
|+ +++|.+++.... .++++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++..
T Consensus 86 ~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred ec-CCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 99 899999997543 2689999999999999999999999 99999999999999 47889999999999876
Q ss_pred ccccccc-----cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCC-ccHH-HHHHHhhccc
Q 046275 1014 SAMDTHL-----SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD-NNLV-GWVKQHAKLK 1086 (1176)
Q Consensus 1014 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~-~~~~-~~~~~~~~~~ 1086 (1176)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .... ..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc
Confidence 5433211 1245679999999999999999999999999999999999999998644221 1111 1111111110
Q ss_pred cccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCC
Q 046275 1087 ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLD 1144 (1176)
Q Consensus 1087 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~ 1144 (1176)
. +......+ ..+.+++.+||+.||++|||+.++++.|+++....+..
T Consensus 239 ~-----~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 285 (296)
T 3uzp_A 239 I-----EVLCKGYP------SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp H-----HHHTTTSC------HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred h-----HHHHhhCC------HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCc
Confidence 0 01111112 13556999999999999999999999999998776553
No 175
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=9.6e-37 Score=358.16 Aligned_cols=251 Identities=22% Similarity=0.259 Sum_probs=191.6
Q ss_pred cCCCCC-ceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHh-cCCCCcccceeEEee----CCeeE
Q 046275 860 NGFHND-SLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGK-IKHRNLVPLLGYCKV----GEERL 932 (1176)
Q Consensus 860 ~~y~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~~~~ 932 (1176)
++|.+. ++||+|+||+||+|+++ +|+.||||++.. ...+.+|+.++.+ .+||||+++++++.. ....|
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456665 68999999999999987 689999999852 3467788888754 589999999999875 56789
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC---CCcEEEEeecc
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE---NFEARVSDFGM 1009 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfGl 1009 (1176)
+||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 136 lv~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEeccc
Confidence 9999999999999998653 23589999999999999999999999 9999999999999997 78899999999
Q ss_pred ccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCc--cHHHHHHHhhcccc
Q 046275 1010 ARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN--NLVGWVKQHAKLKI 1087 (1176)
Q Consensus 1010 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~--~~~~~~~~~~~~~~ 1087 (1176)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...... .....
T Consensus 211 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i---~~~~~ 284 (400)
T 1nxk_A 211 AKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI---RMGQY 284 (400)
T ss_dssp CEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH---HHTCC
T ss_pred ccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH---HcCcc
Confidence 98654322 23456789999999999999999999999999999999999999976542211 111111 11111
Q ss_pred ccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 046275 1088 SDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMF 1134 (1176)
Q Consensus 1088 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L 1134 (1176)
. ++...+...+ ..+.+++.+||+.||++|||+.|++++-
T Consensus 285 ~--~~~~~~~~~s------~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 285 E--FPNPEWSEVS------EEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp C--CCTTTTTTSC------HHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred c--CCCcccccCC------HHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 0 1111111111 1356799999999999999999999973
No 176
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1e-38 Score=361.50 Aligned_cols=267 Identities=24% Similarity=0.368 Sum_probs=191.4
Q ss_pred hcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHh--cCCCCcccceeEEeeCC----eeE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGK--IKHRNLVPLLGYCKVGE----ERL 932 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~ 932 (1176)
.++|.+.+.||+|+||.||+|++. |+.||||++.. ...+.+.+|.+++.. ++||||+++++++.... ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~---~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC----TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecc---cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 357999999999999999999875 89999998753 345667788888887 79999999999998776 789
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHH--------hcCCCCeeeCCCCCCCEEECCCCcEEE
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLH--------HNCIPHIIHRDMKSSNVLLDENFEARV 1004 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~~kl 1004 (1176)
+||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+||
T Consensus 78 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-B
T ss_pred EEEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEE
Confidence 999999999999999754 5788899999999999999999 76 9999999999999999999999
Q ss_pred Eeeccccccccccccc--cccccccCCcccCccccCCC------CCCchhhhHHHHHHHHHHHcC----------CCCCC
Q 046275 1005 SDFGMARLMSAMDTHL--SVSTLAGTPGYVPPEYYQSF------RCSTKGDVYSYGVVLLELLTG----------KRPTD 1066 (1176)
Q Consensus 1005 ~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg----------~~P~~ 1066 (1176)
+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||.
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~ 229 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTT
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccc
Confidence 9999997654433221 12344799999999999776 445789999999999999999 66665
Q ss_pred CCCCCCccHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCC
Q 046275 1067 SADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSG 1142 (1176)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~ 1142 (1176)
..................... .+....... .......+.+++.+||+.||++|||++++++.|+++....+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 230 DLVPSDPSVEEMRKVVCEQKL----RPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp TTCC-CCCCC-CHHHHTTSCC----CCCCCGGGG-SSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC--
T ss_pred ccCCCCccHHHHHHHHHHhhc----CCCcccccc-chhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhcc
Confidence 433222211122222211111 111111111 11234457789999999999999999999999999876543
No 177
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.6e-36 Score=342.13 Aligned_cols=267 Identities=23% Similarity=0.312 Sum_probs=206.2
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEE-eeCCeeEEEE
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYC-KVGEERLLVY 935 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV~ 935 (1176)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ..+.+.+|+.+++.++|++++..++++ ......++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 4578999999999999999999985 68899999865432 224578899999999988877777665 6677889999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE---CCCCcEEEEeeccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL---DENFEARVSDFGMARL 1012 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~ 1012 (1176)
||+ +|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 85 e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECC-CCBHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred Ecc-CCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 999 899999998543 2689999999999999999999999 99999999999999 7889999999999987
Q ss_pred cccccccc-----cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCc-cH-HHHHHHhhcc
Q 046275 1013 MSAMDTHL-----SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NL-VGWVKQHAKL 1085 (1176)
Q Consensus 1013 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~-~~-~~~~~~~~~~ 1085 (1176)
........ ......||+.|+|||++.+..++.++|||||||++|+|++|+.||........ .. ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc
Confidence 65433211 12356799999999999999999999999999999999999999976543221 11 1111111111
Q ss_pred ccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCC
Q 046275 1086 KISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLD 1144 (1176)
Q Consensus 1086 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~ 1144 (1176)
.. +......+ ..+.+++.+||+.||++|||++++++.|+++....+.+
T Consensus 238 ~~-----~~~~~~~~------~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~ 285 (296)
T 4hgt_A 238 PI-----EVLCKGYP------SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp CH-----HHHTTTSC------HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCC
T ss_pred hh-----hhhhccCC------HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 00 00111111 14566999999999999999999999999998765543
No 178
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=368.29 Aligned_cols=347 Identities=23% Similarity=0.233 Sum_probs=257.9
Q ss_pred cEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccC
Q 046275 304 VKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSS 383 (1176)
Q Consensus 304 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 383 (1176)
+.++.++++++ .+|..+. ++|++|+|++|+++ .++...|..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCC-EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccc-eECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 45555555555 3444332 35555555555555 33333445555555555555555544455555555555555555
Q ss_pred CcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCC
Q 046275 384 NNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGE 463 (1176)
Q Consensus 384 N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 463 (1176)
|++ ++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+.+.
T Consensus 90 n~l--------------------------~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~ 143 (477)
T 2id5_A 90 NRL--------------------------KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYI 143 (477)
T ss_dssp SCC--------------------------CSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEE
T ss_pred CcC--------------------------CccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCcccee
Confidence 544 434445567778888888888888877777888888888888888888877
Q ss_pred CCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCC
Q 046275 464 IPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDC 543 (1176)
Q Consensus 464 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 543 (1176)
.|..|.++++|++|+|++|++++..+..|.++++|+.|+|++|.+.+..+..|..+++|++|++++|.+.+.+|..+...
T Consensus 144 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~ 223 (477)
T 2id5_A 144 SHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYG 223 (477)
T ss_dssp CTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTT
T ss_pred ChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccC
Confidence 78888888889999999999887777788899999999999999988878888899999999999998888888888877
Q ss_pred CCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccc
Q 046275 544 RSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRV 623 (1176)
Q Consensus 544 ~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 623 (1176)
.+|+.|+|++|.++ .+|...|.
T Consensus 224 ~~L~~L~l~~n~l~-~~~~~~~~--------------------------------------------------------- 245 (477)
T 2id5_A 224 LNLTSLSITHCNLT-AVPYLAVR--------------------------------------------------------- 245 (477)
T ss_dssp CCCSEEEEESSCCC-SCCHHHHT---------------------------------------------------------
T ss_pred ccccEEECcCCccc-ccCHHHhc---------------------------------------------------------
Confidence 89999999999987 46654332
Q ss_pred cCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCC
Q 046275 624 YGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSS 703 (1176)
Q Consensus 624 ~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~ 703 (1176)
.+.+|++|||++|++++..+..|+++++|+.|+|++|++++..|..|+.+++|++|+|++|+|++..|..
T Consensus 246 ----------~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 315 (477)
T 2id5_A 246 ----------HLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESV 315 (477)
T ss_dssp ----------TCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGG
T ss_pred ----------CccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhH
Confidence 2346889999999999888888999999999999999999888999999999999999999999766667
Q ss_pred ccccccccccccccccccCCCCCCCCccccCCccccCCCCCCCCC
Q 046275 704 MSSLTLLNEIDLCNNQLTGMIPVMGQFETFQPAKFLNNSGLCGLP 748 (1176)
Q Consensus 704 l~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~~~~ 748 (1176)
+..+++|+.|+|++|+++...+....+.......+.++...|..|
T Consensus 316 ~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 316 FHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp BSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred cCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 889999999999999998765532222222334455665566544
No 179
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.1e-36 Score=337.51 Aligned_cols=258 Identities=24% Similarity=0.337 Sum_probs=206.8
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC------cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG------QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERL 932 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 932 (1176)
++|++.+.||+|+||.||+|++. +|+.||+|.+..... ...+.+.+|+.++++++||||+++++++.+....+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46889999999999999999987 689999998865322 13567899999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCC----cEEEEeec
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENF----EARVSDFG 1008 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~DfG 1008 (1176)
+||||+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE----SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 9999999999999997654 689999999999999999999999 999999999999998877 79999999
Q ss_pred cccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccc
Q 046275 1009 MARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKIS 1088 (1176)
Q Consensus 1009 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1088 (1176)
++........ .....||+.|+|||++.+..++.++||||||+++|+|++|+.||.... ............
T Consensus 158 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~-- 227 (283)
T 3bhy_A 158 IAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET-----KQETLTNISAVN-- 227 (283)
T ss_dssp TCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTC--
T ss_pred cceeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc-----hHHHHHHhHhcc--
Confidence 9986543222 234568999999999999999999999999999999999999996543 112222221111
Q ss_pred cccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHHHhhC
Q 046275 1089 DVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM--FKEIQAG 1140 (1176)
Q Consensus 1089 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~--L~~i~~~ 1140 (1176)
...++......+ ..+.+++.+||+.||++|||+.+++++ ++.++..
T Consensus 228 ~~~~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 228 YDFDEEYFSNTS------ELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp CCCCHHHHTTCC------HHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred cCCcchhcccCC------HHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 111222222222 235679999999999999999999985 6666544
No 180
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=6.3e-37 Score=352.85 Aligned_cols=248 Identities=29% Similarity=0.393 Sum_probs=199.8
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcC---HHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQG---DREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
+.|...+.||+|+||+||+|++. +|+.||||++....... .+.+.+|++++++++||||+++++++..+...++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 45888999999999999999975 68899999986533222 346889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+. |++.+++.... .++++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp ECCS-EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred ecCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 9997 58888886543 2689999999999999999999999 999999999999999999999999999976543
Q ss_pred ccccccccccccCCcccCccccC---CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQ---SFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
. ....||+.|+|||++. ...++.++|||||||++|||++|+.||.... ..................
T Consensus 207 ~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~ 275 (348)
T 1u5q_A 207 A------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNESPALQS 275 (348)
T ss_dssp B------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCCCC
T ss_pred C------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHhcCCCCCCC
Confidence 2 3457999999999984 5678999999999999999999999986543 112222222211111111
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFK 1135 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~ 1135 (1176)
...+ ..+.+++.+||+.||++|||+++++++--
T Consensus 276 ----~~~~------~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 276 ----GHWS------EYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp ----TTSC------HHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred ----CCCC------HHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 1111 13556999999999999999999998743
No 181
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-37 Score=357.67 Aligned_cols=263 Identities=27% Similarity=0.428 Sum_probs=196.7
Q ss_pred CCCCCceEeEeCceEEEEEEEC--CC--CEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEee-CCeeEEE
Q 046275 861 GFHNDSLIGSGGFGDVYKAKLK--DG--STVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKV-GEERLLV 934 (1176)
Q Consensus 861 ~y~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lV 934 (1176)
.|.+.+.||+|+||+||+|++. ++ ..||+|.+..... ...+++.+|+.++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4677889999999999999864 22 3578888754322 334678999999999999999999998654 5678999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+++|+|.+++.... ..+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 170 ~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 99999999999997653 2588999999999999999999999 99999999999999999999999999998654
Q ss_pred cccccc--cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhcccccccc
Q 046275 1015 AMDTHL--SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVF 1091 (1176)
Q Consensus 1015 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1091 (1176)
...... ......+|+.|+|||++.+..++.++|||||||++|||+| |..||...... ........ ... ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~~~---~~~--~~ 316 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQ---GRR--LL 316 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHHHT---TCC--CC
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHHHc---CCC--CC
Confidence 322211 1234467889999999999899999999999999999999 67777654322 22222211 110 01
Q ss_pred CcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCCC
Q 046275 1092 DPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDS 1145 (1176)
Q Consensus 1092 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~~ 1145 (1176)
.+ ...+ ..+.+++.+||+.||++|||+.+++++|+++......+.
T Consensus 317 ~p---~~~~------~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 317 QP---EYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp CC---TTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred CC---CCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 11 1111 135569999999999999999999999999987765443
No 182
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.1e-37 Score=356.70 Aligned_cols=210 Identities=23% Similarity=0.339 Sum_probs=181.2
Q ss_pred cccCHHHHHHHhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcC-----CCCcccc
Q 046275 848 RKLTFADLLEATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIK-----HRNLVPL 921 (1176)
Q Consensus 848 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l 921 (1176)
..+++.+.....++|.+.+.||+|+||+||+|++. +++.||||++.. .....+.+..|+.+++.++ ||||+++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 34455555556789999999999999999999985 689999998853 2233456788999999996 9999999
Q ss_pred eeEEeeCCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC---
Q 046275 922 LGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE--- 998 (1176)
Q Consensus 922 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~--- 998 (1176)
++++...+..++||||+ +++|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNY--NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTC
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccc
Confidence 99999999999999999 8899999986642 2589999999999999999999999 9999999999999975
Q ss_pred ----------------------CCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHH
Q 046275 999 ----------------------NFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLL 1056 (1176)
Q Consensus 999 ----------------------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ 1056 (1176)
++.+||+|||+|+...... ....||+.|+|||++.+..++.++||||+||++|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 250 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA 250 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHHHHHH
Confidence 7889999999998644322 3457899999999999999999999999999999
Q ss_pred HHHcCCCCCCCCC
Q 046275 1057 ELLTGKRPTDSAD 1069 (1176)
Q Consensus 1057 elltg~~P~~~~~ 1069 (1176)
+|++|+.||...+
T Consensus 251 ell~g~~pf~~~~ 263 (360)
T 3llt_A 251 ELYTGSLLFRTHE 263 (360)
T ss_dssp HHHHSSCSCCCSS
T ss_pred HHHHCCCCCCCCc
Confidence 9999999997543
No 183
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.9e-37 Score=360.34 Aligned_cols=204 Identities=25% Similarity=0.436 Sum_probs=164.1
Q ss_pred HHhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC--CcCHHHHHHHHHHHHhcC-CCCcccceeEEeeCC--e
Q 046275 857 EATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS--GQGDREFTAEMETIGKIK-HRNLVPLLGYCKVGE--E 930 (1176)
Q Consensus 857 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 930 (1176)
...++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34578999999999999999999986 68999999985432 223456788999999997 999999999997544 6
Q ss_pred eEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccc
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1010 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 1010 (1176)
.|+||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 899999997 5999999753 589999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccc-------------------ccccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Q 046275 1011 RLMSAMD-------------------THLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSAD 1069 (1176)
Q Consensus 1011 ~~~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~ 1069 (1176)
+...... .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 8653211 1112244679999999999976 678999999999999999999999997643
No 184
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=8.7e-37 Score=354.65 Aligned_cols=200 Identities=27% Similarity=0.425 Sum_probs=175.4
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC-CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS-GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 57899999999999999999987 68999999886532 22345688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD 1017 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 1017 (1176)
+++|+|.+++...+ .+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~~~~~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 186 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 186 (360)
T ss_dssp CTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC
T ss_pred CCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccccc
Confidence 99999999998764 5899999999999999999999842 79999999999999999999999999997553221
Q ss_pred ccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Q 046275 1018 THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSAD 1069 (1176)
Q Consensus 1018 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~ 1069 (1176)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+
T Consensus 187 ----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 234 (360)
T 3eqc_A 187 ----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 234 (360)
T ss_dssp --------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred ----ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 234579999999999999999999999999999999999999997543
No 185
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.5e-36 Score=343.82 Aligned_cols=251 Identities=25% Similarity=0.356 Sum_probs=203.3
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
.++|.+.+.||+|+||.||+|++. +|+.||+|++........+.+.+|+.++++++||||+++++++.+....++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 356899999999999999999986 6899999998765444556788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE---CCCCcEEEEeeccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL---DENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~~~ 1014 (1176)
+++|+|.+++...+ .+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||+++...
T Consensus 88 ~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 88 VSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp CCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred CCCccHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 99999999997654 689999999999999999999999 99999999999999 788999999999987543
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
.. ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .............. ++..
T Consensus 161 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~~~--~~~~ 229 (304)
T 2jam_A 161 NG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET-----ESKLFEKIKEGYYE--FESP 229 (304)
T ss_dssp CB----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHCCCC--CCTT
T ss_pred CC----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCCCC--CCcc
Confidence 22 1234568999999999999999999999999999999999999986543 12222222222110 1111
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.....+ ..+.+++.+||+.||++|||+++++++
T Consensus 230 ~~~~~~------~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 230 FWDDIS------ESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTTTSC------HHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccCC------HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111112 235679999999999999999999986
No 186
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=9.6e-37 Score=364.63 Aligned_cols=258 Identities=24% Similarity=0.315 Sum_probs=195.3
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc--CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeC------C
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI--SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVG------E 929 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 929 (1176)
.++|++.+.||+|+||+||+|++. +|+.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467999999999999999999886 5889999998653 223345688999999999999999999999654 4
Q ss_pred eeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecc
Q 046275 930 ERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGM 1009 (1176)
Q Consensus 930 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 1009 (1176)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 57999999976 57666642 488999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcc----
Q 046275 1010 ARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKL---- 1085 (1176)
Q Consensus 1010 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~---- 1085 (1176)
|+...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+.. ..+.......
T Consensus 211 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~----~~~~~i~~~lg~p~ 283 (464)
T 3ttj_A 211 ARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI----DQWNKVIEQLGTPC 283 (464)
T ss_dssp C-----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCSCC
T ss_pred eeecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHhcCCCC
Confidence 98664322 234568999999999999999999999999999999999999999764311 1111110000
Q ss_pred ------------------------ccccccCcccccCCCch-HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1086 ------------------------KISDVFDPELMKEDPNI-EIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1086 ------------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.....+........... ......+.+++.+||+.||++|||++|+++|
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00001111111111111 1123457789999999999999999999987
No 187
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=8.8e-37 Score=346.47 Aligned_cols=266 Identities=24% Similarity=0.305 Sum_probs=199.3
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC-----cCHHHHHHHHHHHHhcC---CCCcccceeEEeeC
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG-----QGDREFTAEMETIGKIK---HRNLVPLLGYCKVG 928 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 928 (1176)
..++|++.+.||+|+||+||+|++. +++.||+|++..... .....+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4578999999999999999999975 689999999864321 22346778888887775 99999999999775
Q ss_pred C-----eeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEE
Q 046275 929 E-----ERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEAR 1003 (1176)
Q Consensus 929 ~-----~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 1003 (1176)
. ..++||||+. |+|.+++..... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP--PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence 5 4799999997 599999987642 2489999999999999999999999 999999999999999999999
Q ss_pred EEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhh
Q 046275 1004 VSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHA 1083 (1176)
Q Consensus 1004 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~ 1083 (1176)
|+|||+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... .+........
T Consensus 161 l~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~ 236 (308)
T 3g33_A 161 LADFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIG 236 (308)
T ss_dssp ECSCSCTTTSTTCCC---SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHC
T ss_pred EeeCccccccCCCcc---cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC
Confidence 999999986543222 245678999999999998899999999999999999999999997543111 1111111111
Q ss_pred cc---ccccccC--c-ccccCCCchHH-----HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1084 KL---KISDVFD--P-ELMKEDPNIEI-----ELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1084 ~~---~~~~~~~--~-~~~~~~~~~~~-----~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.. .+..... . ......+.... ....+.+++.+||+.||++|||+.|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 237 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00 0000000 0 00000000000 11245679999999999999999999875
No 188
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.2e-36 Score=339.98 Aligned_cols=247 Identities=25% Similarity=0.370 Sum_probs=198.1
Q ss_pred CCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC--CcCHHHHHHHHHHHHhcCCCCcccceeEEee----CCeeEE
Q 046275 861 GFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS--GQGDREFTAEMETIGKIKHRNLVPLLGYCKV----GEERLL 933 (1176)
Q Consensus 861 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 933 (1176)
.|.+.+.||+|+||+||+|.+. ++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4777889999999999999886 58889999886432 2234568899999999999999999998865 456899
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeCCCCCCCEEEC-CCCcEEEEeeccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPH--IIHRDMKSSNVLLD-ENFEARVSDFGMA 1010 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~DfGla 1010 (1176)
||||+++|+|.+++...+ .+++..++.++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||++
T Consensus 107 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEecCCCCHHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 999999999999998754 689999999999999999999999 7 99999999999998 7899999999999
Q ss_pred cccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccc
Q 046275 1011 RLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDV 1090 (1176)
Q Consensus 1011 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1090 (1176)
....... .....||+.|+|||++.+ .++.++||||+|+++|+|++|+.||.... ................
T Consensus 180 ~~~~~~~----~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~~- 249 (290)
T 1t4h_A 180 TLKRASF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGVKPA- 249 (290)
T ss_dssp GGCCTTS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTCCCG-
T ss_pred ccccccc----cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcC----cHHHHHHHHhccCCcc-
Confidence 7543322 234579999999998875 58999999999999999999999996532 2222222222221111
Q ss_pred cCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1091 FDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1091 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
......+ ..+.+++.+||+.||.+|||+.|++++
T Consensus 250 ---~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 250 ---SFDKVAI------PEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ---GGGGCCC------HHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ---ccCCCCC------HHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1111111 135679999999999999999999875
No 189
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.7e-37 Score=346.55 Aligned_cols=258 Identities=22% Similarity=0.341 Sum_probs=203.6
Q ss_pred hcCCCCCc-eEeEeCceEEEEEEEC---CCCEEEEEEeeccCCc--CHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeE
Q 046275 859 TNGFHNDS-LIGSGGFGDVYKAKLK---DGSTVAIKKLIHISGQ--GDREFTAEMETIGKIKHRNLVPLLGYCKVGEERL 932 (1176)
Q Consensus 859 ~~~y~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 932 (1176)
.++|.+.+ .||+|+||.||+|.+. +++.||||++...... ..+.+.+|+++++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45677777 9999999999999653 4678999988654322 246789999999999999999999998 567789
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccc
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1012 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 1012 (1176)
+||||+++++|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 94 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEeCCCCCHHHHHHhCc----CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 9999999999999998654 589999999999999999999999 999999999999999999999999999987
Q ss_pred cccccccc-cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccc
Q 046275 1013 MSAMDTHL-SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDV 1090 (1176)
Q Consensus 1013 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1090 (1176)
........ ......+++.|+|||++.+..++.++||||||+++|+|++ |+.||..... ............
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~--- 238 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-----SEVTAMLEKGER--- 238 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----HHHHHHHHTTCC---
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCCC---
Confidence 65433221 1233456789999999988889999999999999999999 9999875431 112222222111
Q ss_pred cCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1091 FDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1091 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
+......+ ..+.+++.+||+.||++|||+.++++.|+++...
T Consensus 239 --~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 239 --MGCPAGCP------REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp --CCCCTTCC------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11111111 1355699999999999999999999999998654
No 190
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=353.93 Aligned_cols=256 Identities=17% Similarity=0.199 Sum_probs=207.3
Q ss_pred HhcCCCCCceEeEeCceEEEEEE------ECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcC---CCCcccceeEEeeC
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAK------LKDGSTVAIKKLIHISGQGDREFTAEMETIGKIK---HRNLVPLLGYCKVG 928 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 928 (1176)
..++|.+.+.||+|+||+||+|+ ..+++.||+|++.. ....++.+|++++++++ |+||+++++++..+
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP---ANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESS---CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC---CChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34679999999999999999994 34689999999853 34567888999988887 99999999999999
Q ss_pred CeeEEEEeeccCCCHHHHHhhccc-cCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC---------
Q 046275 929 EERLLVYEYMRYGSLEDVLHNQKK-VGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE--------- 998 (1176)
Q Consensus 929 ~~~~lV~E~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~--------- 998 (1176)
+..|+||||+++|+|.++++..+. ....+++..++.++.|+++||+|||+. +||||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999986432 234699999999999999999999999 9999999999999998
Q ss_pred --CCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHH
Q 046275 999 --NFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLV 1076 (1176)
Q Consensus 999 --~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~ 1076 (1176)
++.+||+|||+|+.+.............||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---- 292 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE---- 292 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE----
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc----
Confidence 89999999999976554333334456789999999999999999999999999999999999999985432110
Q ss_pred HHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHHhhC
Q 046275 1077 GWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRR-PTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1077 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R-Pt~~evl~~L~~i~~~ 1140 (1176)
......+ ...+. . ..+.+++..|++.+|.+| |+++++.+.|+++...
T Consensus 293 --------~~~~~~~-----~~~~~-~---~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 293 --------CKPEGLF-----RRLPH-L---DMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp --------EEECSCC-----TTCSS-H---HHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --------eeechhc-----cccCc-H---HHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 0011111 11111 1 133468999999999998 5788888888888654
No 191
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=6.8e-37 Score=352.04 Aligned_cols=275 Identities=23% Similarity=0.324 Sum_probs=201.1
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHH--HHhcCCCCcccceeEEee-----CCeeE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMET--IGKIKHRNLVPLLGYCKV-----GEERL 932 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~-----~~~~~ 932 (1176)
++|++.+.||+|+||.||+|++ +++.||||++... ....+..|.++ +..++||||+++++++.. ....+
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 5789999999999999999987 5899999998542 23444455554 445899999999985532 33568
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcC------CCCeeeCCCCCCCEEECCCCcEEEEe
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNC------IPHIIHRDMKSSNVLLDENFEARVSD 1006 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~kl~D 1006 (1176)
+||||+++|+|.+++... ..++..+..++.|+++||+|||+.. .++|+||||||+||+++.++.+||+|
T Consensus 89 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D 163 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLH-----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163 (336)
T ss_dssp EEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred EEEecCCCCcHHHHHhhc-----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEee
Confidence 999999999999999765 3588999999999999999999872 23799999999999999999999999
Q ss_pred eccccccccccc------cccccccccCCcccCccccCC-------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCc
Q 046275 1007 FGMARLMSAMDT------HLSVSTLAGTPGYVPPEYYQS-------FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN 1073 (1176)
Q Consensus 1007 fGla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~ 1073 (1176)
||+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||........
T Consensus 164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~ 243 (336)
T 3g2f_A 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243 (336)
T ss_dssp CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence 999987643221 111234579999999999987 4567899999999999999999887654322111
Q ss_pred -------------cHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1074 -------------NLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1074 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
....+........ ..+.+....+........+.+++.+||+.||++|||++|+++.|+++...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 244 YQMAFQTEVGNHPTFEDMQVLVSREK----QRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CCCTTHHHHCSSCCHHHHHHHHTTSC----CCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHhhhcccCCCchHHHHHhhhcccc----cCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 0111111111111 11122221112112333567799999999999999999999999999977
Q ss_pred CCCCCCC
Q 046275 1141 SGLDSQS 1147 (1176)
Q Consensus 1141 ~~~~~~~ 1147 (1176)
...+...
T Consensus 320 ~~~~~~~ 326 (336)
T 3g2f_A 320 WERNKSV 326 (336)
T ss_dssp CCC----
T ss_pred HHhcccC
Confidence 7665543
No 192
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.1e-37 Score=346.29 Aligned_cols=258 Identities=22% Similarity=0.325 Sum_probs=205.0
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEe--eCCeeEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCK--VGEERLL 933 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 933 (1176)
.++|++.+.||+|+||.||+|+++ +++.||+|++..... ...+.+.+|+.++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357899999999999999999987 689999999864322 23456889999999999999999999874 3678899
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCC-----eeeCCCCCCCEEECCCCcEEEEeec
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPH-----IIHRDMKSSNVLLDENFEARVSDFG 1008 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~kl~DfG 1008 (1176)
||||+++|+|.+++.........+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999987654445699999999999999999999999 6 9999999999999999999999999
Q ss_pred cccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccc
Q 046275 1009 MARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKIS 1088 (1176)
Q Consensus 1009 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1088 (1176)
.++....... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||...+ ..............
T Consensus 162 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~i~~~~~~ 234 (279)
T 2w5a_A 162 LARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS-----QKELAGKIREGKFR 234 (279)
T ss_dssp HHHHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCC
T ss_pred hheeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC-----HHHHHHHHhhcccc
Confidence 9986543221 1234568999999999998899999999999999999999999987543 12222222222211
Q ss_pred cccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 046275 1089 DVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 1137 (1176)
Q Consensus 1089 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i 1137 (1176)
.+....+ ..+.+++.+||+.||++|||+.|++++...-
T Consensus 235 -----~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~ 272 (279)
T 2w5a_A 235 -----RIPYRYS------DELNEIITRMLNLKDYHRPSVEEILENPLIL 272 (279)
T ss_dssp -----CCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred -----cCCcccC------HHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence 1111111 1355699999999999999999999876533
No 193
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=5.1e-37 Score=349.93 Aligned_cols=263 Identities=25% Similarity=0.384 Sum_probs=205.8
Q ss_pred CCCCceEeEeCceEEEEEEEC-----CCCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEeeC--CeeEE
Q 046275 862 FHNDSLIGSGGFGDVYKAKLK-----DGSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVG--EERLL 933 (1176)
Q Consensus 862 y~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 933 (1176)
|++.+.||+|+||+||++.+. +++.||||++..... ...+.+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488999999999999998653 578899999865432 2345689999999999999999999999874 67899
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
||||+++|+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 113 v~e~~~~~~L~~~l~~~-----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH-----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGGS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 99999999999999754 489999999999999999999999 9999999999999999999999999999876
Q ss_pred ccccccc-cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCC--------Cc--cHHHHHHHh
Q 046275 1014 SAMDTHL-SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFG--------DN--NLVGWVKQH 1082 (1176)
Q Consensus 1014 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~--------~~--~~~~~~~~~ 1082 (1176)
....... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... .. .........
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL 264 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHH
Confidence 5433221 223456888999999999888999999999999999999999998643210 00 000111111
Q ss_pred hccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCC
Q 046275 1083 AKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 1143 (1176)
Q Consensus 1083 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~ 1143 (1176)
.... ........+ ..+.+++.+||+.||++|||++++++.|+++......
T Consensus 265 ~~~~-----~~~~~~~~~------~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 265 ERGE-----RLPRPDKCP------AEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HTTC-----CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred hccc-----CCCCCcccc------HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 1111 111111111 2456799999999999999999999999998765433
No 194
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.1e-37 Score=351.98 Aligned_cols=269 Identities=25% Similarity=0.331 Sum_probs=195.6
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcC-CCCcccceeEEe--------eCC
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIK-HRNLVPLLGYCK--------VGE 929 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~~~ 929 (1176)
.+|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.+++++. ||||+++++++. ...
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 47889999999999999999986 68999999986655555667899999999996 999999999984 344
Q ss_pred eeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeCCCCCCCEEECCCCcEEEEee
Q 046275 930 ERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPH--IIHRDMKSSNVLLDENFEARVSDF 1007 (1176)
Q Consensus 930 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Df 1007 (1176)
..++||||+. |+|.+++..... ..++++.+++.++.|++.||+|||+. + |+||||||+||+++.++.+||+||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred eEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecC
Confidence 5799999996 699999876432 23699999999999999999999998 7 999999999999999999999999
Q ss_pred ccccccccccccc----------cccccccCCcccCcccc---CCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCcc
Q 046275 1008 GMARLMSAMDTHL----------SVSTLAGTPGYVPPEYY---QSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNN 1074 (1176)
Q Consensus 1008 Gla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~ 1074 (1176)
|+++......... ......||+.|+|||++ .+..++.++|||||||++|+|++|+.||......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--- 259 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--- 259 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH---
Confidence 9998765432211 11244689999999998 5667899999999999999999999998643211
Q ss_pred HHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCCCCCCccccc
Q 046275 1075 LVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATD 1152 (1176)
Q Consensus 1075 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~~~~~~~~~~ 1152 (1176)
..... .. ........+. .+.+++.+||+.||++|||+.|++++|+++.+....+....+...
T Consensus 260 --~~~~~----~~----~~~~~~~~~~------~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~~~~~~~~~ 321 (337)
T 3ll6_A 260 --RIVNG----KY----SIPPHDTQYT------VFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSPITEL 321 (337)
T ss_dssp ------------C----CCCTTCCSSG------GGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCCTTSCCHHH
T ss_pred --HhhcC----cc----cCCcccccch------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCCCCccHHHH
Confidence 11110 00 0000111111 245699999999999999999999999999887666555444433
No 195
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-36 Score=349.59 Aligned_cols=260 Identities=24% Similarity=0.398 Sum_probs=201.0
Q ss_pred cCCCCCceEeEeCceEEEEEEECC-----CCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKD-----GSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLL 933 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 933 (1176)
++|++.+.||+|+||.||+|++.. +..||+|++..... .....+.+|+.++++++||||+++++++......++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 467788999999999999998753 23599998864322 234468899999999999999999999999999999
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 124 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKD---GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEECCTTEEHHHHHHHTT---TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 999999999999997643 2689999999999999999999999 9999999999999999999999999999876
Q ss_pred cccccc-ccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhcccccccc
Q 046275 1014 SAMDTH-LSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVF 1091 (1176)
Q Consensus 1014 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1091 (1176)
...... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.... .............
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-----~~~~~~~~~~~~~---- 268 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS-----NHEVMKAINDGFR---- 268 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTTCC----
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC-----HHHHHHHHHCCCc----
Confidence 543221 11223456889999999998899999999999999999999 999986543 1122222221110
Q ss_pred CcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1092 DPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1092 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
.......+ ..+.+++.+||+.||++||++.+++++|+++....
T Consensus 269 -~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 269 -LPTPMDCP------SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp -CCCCTTCB------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred -CCCcccCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 01111111 13556999999999999999999999999987643
No 196
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=344.45 Aligned_cols=261 Identities=27% Similarity=0.371 Sum_probs=196.9
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcC--HHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQG--DREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
++|++.+.||+|+||+||+|++. +|+.||+|++....... .+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57899999999999999999987 58999999886543222 3557889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAM 1016 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 1016 (1176)
|+++++|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRYQR----GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 999999999887554 589999999999999999999999 9999999999999999999999999999876532
Q ss_pred cccccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhh-----------c
Q 046275 1017 DTHLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHA-----------K 1084 (1176)
Q Consensus 1017 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~-----------~ 1084 (1176)
.. ......||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||......+ .......... .
T Consensus 156 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 232 (311)
T 4agu_A 156 SD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD-QLYLIRKTLGDLIPRHQQVFST 232 (311)
T ss_dssp ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHT
T ss_pred cc--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhccccccccccccc
Confidence 22 1244578999999999865 678999999999999999999999997643211 0111001000 0
Q ss_pred cccc---cccCcccc----cCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1085 LKIS---DVFDPELM----KEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1085 ~~~~---~~~~~~~~----~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.... ...++... ...+.. ...+.+++.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 233 NQYFSGVKIPDPEDMEPLELKFPNI---SYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHCTTC---CHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccccCcCCCccccchhhhhcccc---cHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 00000000 000111 1235679999999999999999999976
No 197
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4e-37 Score=352.48 Aligned_cols=264 Identities=25% Similarity=0.350 Sum_probs=205.8
Q ss_pred hcCCCCCceEeEeCceEEEEEEE------CCCCEEEEEEeeccC-CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKL------KDGSTVAIKKLIHIS-GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEER 931 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 931 (1176)
.++|++.+.||+|+||.||+|++ .+++.||+|++.... .....++.+|+.++++++||||+++++++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 35799999999999999999983 257899999986432 23345688999999999999999999999999999
Q ss_pred EEEEeeccCCCHHHHHhhcccc---CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC---CCcEEEE
Q 046275 932 LLVYEYMRYGSLEDVLHNQKKV---GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE---NFEARVS 1005 (1176)
Q Consensus 932 ~lV~E~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 1005 (1176)
|+||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999876422 13589999999999999999999999 9999999999999984 4569999
Q ss_pred eeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhc
Q 046275 1006 DFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAK 1084 (1176)
Q Consensus 1006 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 1084 (1176)
|||+++...............||+.|+|||++.+..++.++||||||+++|+|++ |+.||.... ..........
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~~~~~~~~~ 260 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLEFVTS 260 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----HHHHHHHHHT
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC-----HHHHHHHHhc
Confidence 9999976544333223345568999999999988899999999999999999998 999986543 1222222222
Q ss_pred cccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1085 LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1085 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
.... ......+ ..+.+++.+||+.||.+|||+.+++++++.+....
T Consensus 261 ~~~~-----~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 261 GGRM-----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp TCCC-----CCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCC-----CCCCCCC------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 1111 1111111 13556999999999999999999999999987643
No 198
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=5e-37 Score=344.95 Aligned_cols=259 Identities=27% Similarity=0.440 Sum_probs=212.1
Q ss_pred hcCCCCCceEeEeCceEEEEEEECC-CCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKD-GSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
.++|++.+.||+|+||+||+|+++. +..||+|++.. .....+.+.+|++++++++||||+++++++.++...++||||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECS-CSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 4578889999999999999999874 78899998864 333456789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD 1017 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 1017 (1176)
+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 91 ~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 91 MTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp CTTEEHHHHHHHCCT--TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred CCCCcHHHHHHhccc--CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 999999999986542 3689999999999999999999999 99999999999999999999999999998765432
Q ss_pred ccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCcccc
Q 046275 1018 THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELM 1096 (1176)
Q Consensus 1018 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1176)
. .......+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||...+.. ........... ....
T Consensus 166 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~~~~~~--------~~~~ 234 (288)
T 3kfa_A 166 Y-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYR--------MERP 234 (288)
T ss_dssp S-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTCC--------CCCC
T ss_pred c-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhccCC--------CCCC
Confidence 2 22234567889999999998899999999999999999999 99998765422 12222211111 1111
Q ss_pred cCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1097 KEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1097 ~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
...+ ..+.+++.+||+.||++|||++++++.|+++...
T Consensus 235 ~~~~------~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 235 EGCP------EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp TTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCC------HHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 1111 1355699999999999999999999999988754
No 199
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.4e-36 Score=340.46 Aligned_cols=246 Identities=24% Similarity=0.372 Sum_probs=203.8
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|.+.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|++++++++||||+++++++.+....++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56899999999999999999987 5778999988543 2233567899999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG----RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 9999999999998764 589999999999999999999999 999999999999999999999999999875543
Q ss_pred ccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCccc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPEL 1095 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1095 (1176)
.. .....|++.|+|||++.+..++.++||||+|+++|+|++|+.||.... ............. ..
T Consensus 167 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~------~~ 231 (284)
T 2vgo_A 167 LR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS-----HTETHRRIVNVDL------KF 231 (284)
T ss_dssp SC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTCC------CC
T ss_pred cc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC-----HhHHHHHHhcccc------CC
Confidence 22 234578999999999999999999999999999999999999996543 1112222221111 11
Q ss_pred ccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1096 MKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1096 ~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
....+ ..+.+++.+||+.||++|||+++++++
T Consensus 232 ~~~~~------~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 232 PPFLS------DGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CTTSC------HHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CCcCC------HHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 11111 134569999999999999999999986
No 200
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.4e-35 Score=356.75 Aligned_cols=348 Identities=26% Similarity=0.350 Sum_probs=220.4
Q ss_pred CCCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCcccccccCCCCCcccee
Q 046275 144 CSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGDINVSKCKNLQFL 223 (1176)
Q Consensus 144 l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~~~~~~l~~L~~L 223 (1176)
+++|+.|++++|.+..++. +..+++|++|||++|.+++. +. |..+++| ++|
T Consensus 45 l~~l~~L~l~~~~i~~l~~--~~~l~~L~~L~Ls~n~l~~~---~~--~~~l~~L----------------------~~L 95 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLTDI---TP--LKNLTKL----------------------VDI 95 (466)
T ss_dssp HHTCCEEECCSSCCCCCTT--GGGCTTCCEEECCSSCCCCC---GG--GTTCTTC----------------------CEE
T ss_pred hccccEEecCCCCCccCcc--hhhhcCCCEEECCCCccCCc---hh--hhccccC----------------------CEE
Confidence 4566666666666665542 44555666666666666552 21 3444444 445
Q ss_pred eccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCc
Q 046275 224 DVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSL 303 (1176)
Q Consensus 224 ~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L 303 (1176)
++++|.+++.++ +.++++|++|++++|++++..+ +.++++|++|++++|.+++. + .+..+++|
T Consensus 96 ~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~------------~--~~~~l~~L 158 (466)
T 1o6v_A 96 LMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI------------S--ALSGLTSL 158 (466)
T ss_dssp ECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC------------G--GGTTCTTC
T ss_pred ECCCCccccChh-hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCC------------h--hhccCCcc
Confidence 555554444443 4555555555555555554432 55555555555555555421 1 01223455
Q ss_pred cEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccC
Q 046275 304 VKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSS 383 (1176)
Q Consensus 304 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 383 (1176)
++|+++ |.+.+.. .+.++++|++|++++|.++ .++ .+..+++|++|++++|.+++..| ++.+++|++|++++
T Consensus 159 ~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~-~~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~ 230 (466)
T 1o6v_A 159 QQLSFG-NQVTDLK--PLANLTTLERLDISSNKVS-DIS--VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNG 230 (466)
T ss_dssp SEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCC-CCG--GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCS
T ss_pred cEeecC-CcccCch--hhccCCCCCEEECcCCcCC-CCh--hhccCCCCCEEEecCCccccccc--ccccCCCCEEECCC
Confidence 555554 3333221 2566666666666666665 333 24566666666666666665433 55566666666666
Q ss_pred CcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCC
Q 046275 384 NNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGE 463 (1176)
Q Consensus 384 N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 463 (1176)
|++++ ++ .+ ..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++.+.
T Consensus 231 n~l~~-~~-~l--~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~ 302 (466)
T 1o6v_A 231 NQLKD-IG-TL--ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDI 302 (466)
T ss_dssp SCCCC-CG-GG--GGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCC
T ss_pred CCccc-ch-hh--hcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCc
Confidence 66653 22 22 234567777777777765443 6777788888888888875433 77788888888888888754
Q ss_pred CCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCC
Q 046275 464 IPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDC 543 (1176)
Q Consensus 464 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 543 (1176)
.| ++.+++|+.|+|++|++++..| +..+++|+.|++++|++++. ..+..+++|++|++++|++++..| +..+
T Consensus 303 ~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 374 (466)
T 1o6v_A 303 SP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANL 374 (466)
T ss_dssp GG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTC
T ss_pred hh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcC
Confidence 44 7778888888888888887665 77888888888888888854 468888888888888888887766 7888
Q ss_pred CCCCEEEccCCCCcccCCh
Q 046275 544 RSLIWLDLNTNLFNGSIPP 562 (1176)
Q Consensus 544 ~~L~~L~L~~N~l~g~ip~ 562 (1176)
++|+.|++++|++++ +|.
T Consensus 375 ~~L~~L~l~~n~~~~-~p~ 392 (466)
T 1o6v_A 375 TRITQLGLNDQAWTN-APV 392 (466)
T ss_dssp TTCCEEECCCEEEEC-CCB
T ss_pred CCCCEEeccCCcccC-Cch
Confidence 888888888888886 443
No 201
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.4e-36 Score=341.17 Aligned_cols=247 Identities=21% Similarity=0.360 Sum_probs=199.1
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC--CcCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCeeEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS--GQGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 934 (1176)
.++|++.+.||+|+||+||+|++. +++.||+|++.... .....++.+|+..+.++ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 457999999999999999999987 79999999986532 23345688899999999 999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCC---------------
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDEN--------------- 999 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--------------- 999 (1176)
|||+++|+|.+++.........+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999987654334689999999999999999999999 99999999999999844
Q ss_pred ----CcEEEEeeccccccccccccccccccccCCcccCccccCCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCcc
Q 046275 1000 ----FEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSF-RCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNN 1074 (1176)
Q Consensus 1000 ----~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~ 1074 (1176)
..+|++|||.+...... ....||+.|+|||++.+. .++.++|||||||++|+|++|..|+....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----- 235 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD----- 235 (289)
T ss_dssp ---CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-----
T ss_pred cCCceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-----
Confidence 47999999999865432 234589999999999765 56689999999999999999988754221
Q ss_pred HHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1075 LVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1075 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.+. ....... +......+ ..+.+++.+||+.||++|||+.|++++
T Consensus 236 --~~~-~~~~~~~-----~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 236 --QWH-EIRQGRL-----PRIPQVLS------QEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp --HHH-HHHTTCC-----CCCSSCCC------HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --HHH-HHHcCCC-----CCCCcccC------HHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 111 1111111 11111111 135569999999999999999999876
No 202
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1e-36 Score=360.48 Aligned_cols=254 Identities=26% Similarity=0.357 Sum_probs=193.6
Q ss_pred HHhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC--------cCHHHHHHHHHHHHhcCCCCcccceeEEee
Q 046275 857 EATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG--------QGDREFTAEMETIGKIKHRNLVPLLGYCKV 927 (1176)
Q Consensus 857 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 927 (1176)
...++|.+.+.||+|+||+||+|++. +++.||+|++..... .....+.+|+.++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 34678999999999999999999886 589999999864321 11234789999999999999999999975
Q ss_pred CCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCC---CcEEE
Q 046275 928 GEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDEN---FEARV 1004 (1176)
Q Consensus 928 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl 1004 (1176)
.+..|+||||+++|+|.+++...+ .+++.+++.++.|++.||+|||+. +|+||||||+||+++.+ +.+||
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred cCceEEEEEcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEE
Confidence 456899999999999999887654 689999999999999999999999 99999999999999754 45999
Q ss_pred EeeccccccccccccccccccccCCcccCccccCC---CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHH
Q 046275 1005 SDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQS---FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQ 1081 (1176)
Q Consensus 1005 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~ 1081 (1176)
+|||+|+...... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||....... .+.....
T Consensus 284 ~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i~- 358 (419)
T 3i6u_A 284 TDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQIT- 358 (419)
T ss_dssp CCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHHH-
T ss_pred eecccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHHh-
Confidence 9999998764322 2345679999999999853 567889999999999999999999997643222 2222211
Q ss_pred hhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1082 HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1082 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.... ...+..+...+ ..+.+++.+||+.||++|||++|++++
T Consensus 359 --~~~~--~~~~~~~~~~~------~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 359 --SGKY--NFIPEVWAEVS------EKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp --TTCC--CCCHHHHTTSC------HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --cCCC--CCCchhhcccC------HHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 1111 11122222222 245679999999999999999999885
No 203
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=354.92 Aligned_cols=243 Identities=23% Similarity=0.314 Sum_probs=200.9
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc--------CHHHHHHHHHHHHhcCCCCcccceeEEeeC
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ--------GDREFTAEMETIGKIKHRNLVPLLGYCKVG 928 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 928 (1176)
..++|++.+.||+|+||+||+|++. +++.||||++...... ..+.+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3467999999999999999999976 6889999988653221 233577899999999999999999999999
Q ss_pred CeeEEEEeeccCC-CHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEee
Q 046275 929 EERLLVYEYMRYG-SLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDF 1007 (1176)
Q Consensus 929 ~~~~lV~E~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 1007 (1176)
+..++||||+.+| +|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP----RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999777 9999998654 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccccccccccCCcccCccccCCCCC-CchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccc
Q 046275 1008 GMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRC-STKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLK 1086 (1176)
Q Consensus 1008 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 1086 (1176)
|+++....... .....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||..... .....
T Consensus 175 g~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------~~~~~ 240 (335)
T 3dls_A 175 GSAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-----------TVEAA 240 (335)
T ss_dssp TTCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-----------GTTTC
T ss_pred ccceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-----------HHhhc
Confidence 99987654322 234679999999999988776 7899999999999999999999864210 00000
Q ss_pred cccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1087 ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1087 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
. ..+. ..+ ..+.+++.+||+.||++|||+++++++
T Consensus 241 ~---~~~~---~~~------~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 241 I---HPPY---LVS------KELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp C---CCSS---CCC------HHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred c---CCCc---ccC------HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0000 011 135569999999999999999999987
No 204
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.2e-37 Score=341.30 Aligned_cols=249 Identities=26% Similarity=0.410 Sum_probs=182.8
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC---CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS---GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|.+.+.||+|+||.||+|++. +|+.||+|.+.... ....+.+.+|+.++++++||||+++++++.+....++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 56889999999999999999985 68999999986432 223467889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+++++|.+++.... .++++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRV---KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp ECCTTEEHHHHHHTCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ecCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 9999999999998653 3689999999999999999999999 999999999999999999999999999986543
Q ss_pred ccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCccc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPEL 1095 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1095 (1176)
... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||........ ....... +...
T Consensus 165 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~------~~~~ 231 (278)
T 3cok_A 165 PHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----LNKVVLA------DYEM 231 (278)
T ss_dssp -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CCSS------CCCC
T ss_pred CCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----HHHHhhc------ccCC
Confidence 222 12345789999999999988899999999999999999999999976542210 1111000 0011
Q ss_pred ccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1096 MKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1096 ~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
....+ ..+.+++.+||+.||++|||+++++++
T Consensus 232 ~~~~~------~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 232 PSFLS------IEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp CTTSC------HHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccC------HHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 11111 135569999999999999999999875
No 205
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6.8e-37 Score=341.93 Aligned_cols=252 Identities=28% Similarity=0.433 Sum_probs=198.3
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeC-CeeEEEEeec
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVG-EERLLVYEYM 938 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lV~E~~ 938 (1176)
++|++.+.||+|+||+||+|+++ |+.||+|.+... ...+.+.+|++++++++||||+++++++.+. +..++||||+
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 56889999999999999999885 889999988542 3456789999999999999999999987554 4789999999
Q ss_pred cCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccccc
Q 046275 939 RYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDT 1018 (1176)
Q Consensus 939 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 1018 (1176)
++|+|.+++...+. ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~L~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 171 (278)
T 1byg_A 98 AKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 171 (278)
T ss_dssp TTEEHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred CCCCHHHHHHhccc--ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc-
Confidence 99999999986542 2478999999999999999999999 99999999999999999999999999987554321
Q ss_pred cccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCccccc
Q 046275 1019 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMK 1097 (1176)
Q Consensus 1019 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1176)
....+++.|+|||++.+..++.++||||||+++|+|++ |+.||...... .. ....... ..+....
T Consensus 172 ----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~---~~~~~~~-----~~~~~~~ 237 (278)
T 1byg_A 172 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DV---VPRVEKG-----YKMDAPD 237 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GH---HHHHTTT-----CCCCCCT
T ss_pred ----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HH---HHHHhcC-----CCCCCcc
Confidence 23467889999999988899999999999999999998 99999754321 11 1111111 1111111
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1098 EDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1098 ~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
..+ ..+.+++.+||+.||++|||+.++++.|++++..
T Consensus 238 ~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 238 GCP------PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp TCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCC------HHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 122 1355699999999999999999999999998753
No 206
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=341.86 Aligned_cols=253 Identities=24% Similarity=0.357 Sum_probs=198.6
Q ss_pred CCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeecc
Q 046275 861 GFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMR 939 (1176)
Q Consensus 861 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 939 (1176)
+|....+||+|+||.||+|++. +++.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 3555669999999999999985 688999999876655556779999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC-CCcEEEEeeccccccccccc
Q 046275 940 YGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE-NFEARVSDFGMARLMSAMDT 1018 (1176)
Q Consensus 940 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~~~~~~~ 1018 (1176)
+++|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++........
T Consensus 103 ~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 103 GGSLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp EEEHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 9999999986532 23567899999999999999999999 9999999999999987 89999999999986543221
Q ss_pred cccccccccCCcccCccccCCC--CCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcccc
Q 046275 1019 HLSVSTLAGTPGYVPPEYYQSF--RCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELM 1096 (1176)
Q Consensus 1019 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1176)
......||+.|+|||++.+. .++.++||||||+++|+|++|+.||....... ......... . ..+.+.
T Consensus 179 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~-~----~~~~~~ 248 (295)
T 2clq_A 179 --CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ---AAMFKVGMF-K----VHPEIP 248 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH---HHHHHHHHH-C----CCCCCC
T ss_pred --cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh---HHHHhhccc-c----cccccc
Confidence 12355789999999998764 37899999999999999999999986432111 111111110 1 111121
Q ss_pred cCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1097 KEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1097 ~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+ ..+.+++.+||+.||++|||+.+++++
T Consensus 249 ~~~~------~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 249 ESMS------AEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp TTSC------HHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ccCC------HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1112 134569999999999999999999875
No 207
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.4e-37 Score=374.68 Aligned_cols=261 Identities=27% Similarity=0.390 Sum_probs=210.1
Q ss_pred hcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeec
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYM 938 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 938 (1176)
.++|++.+.||+|+||.||+|+++.+..||||++.... ...+++.+|++++++++||||+++++++.+ +..|+||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 35688889999999999999999888889999986533 345789999999999999999999999876 6789999999
Q ss_pred cCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccccc
Q 046275 939 RYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDT 1018 (1176)
Q Consensus 939 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 1018 (1176)
++|+|.++++... +..+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 344 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 418 (535)
T 2h8h_A 344 SKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418 (535)
T ss_dssp TTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred cCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence 9999999997543 22589999999999999999999999 999999999999999999999999999986643211
Q ss_pred cccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCccccc
Q 046275 1019 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMK 1097 (1176)
Q Consensus 1019 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1176)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||.... ..+......... ......
T Consensus 419 -~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~-----~~~~~~ 487 (535)
T 2h8h_A 419 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----NREVLDQVERGY-----RMPCPP 487 (535)
T ss_dssp -HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC-----HHHHHHHHHTTC-----CCCCCT
T ss_pred -ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCC-----CCCCCC
Confidence 11233457789999999998899999999999999999999 999986543 112222221111 111111
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCC
Q 046275 1098 EDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 1143 (1176)
Q Consensus 1098 ~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~ 1143 (1176)
..+ ..+.+++.+||+.||++|||++++++.|+++....+.
T Consensus 488 ~~~------~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~ 527 (535)
T 2h8h_A 488 ECP------ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527 (535)
T ss_dssp TCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred CCC------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence 112 1355699999999999999999999999988755443
No 208
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.8e-37 Score=353.21 Aligned_cols=254 Identities=22% Similarity=0.302 Sum_probs=202.8
Q ss_pred cCCCCCceEeEeCceEEEEEEE----CCCCEEEEEEeeccC----CcCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCe
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKL----KDGSTVAIKKLIHIS----GQGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEE 930 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 930 (1176)
++|++.+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|+++++.+ +||||+++++++.....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5799999999999999999998 368999999885422 23345677899999999 69999999999999999
Q ss_pred eEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccc
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1010 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 1010 (1176)
.++||||+++|+|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred EEEEeecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 999999999999999998654 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccccccccCCcccCccccCC--CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccc
Q 046275 1011 RLMSAMDTHLSVSTLAGTPGYVPPEYYQS--FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKIS 1088 (1176)
Q Consensus 1011 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1088 (1176)
+........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....+........
T Consensus 207 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~-- 282 (355)
T 1vzo_A 207 KEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRILKSE-- 282 (355)
T ss_dssp EECCGGGGG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHHHHCC--
T ss_pred eecccCCCC-cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHHhccC--
Confidence 865433222 2244679999999999985 457899999999999999999999997654322 2222322222111
Q ss_pred cccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHH
Q 046275 1089 DVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRP-----TMIQVMAMF 1134 (1176)
Q Consensus 1089 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RP-----t~~evl~~L 1134 (1176)
+......+ ..+.+++.+||+.||++|| |++|++++.
T Consensus 283 ----~~~~~~~~------~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 ----PPYPQEMS------ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ----CCCCTTSC------HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ----CCCCcccC------HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 11111111 1345699999999999999 999998863
No 209
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=5.1e-36 Score=348.07 Aligned_cols=256 Identities=25% Similarity=0.377 Sum_probs=205.6
Q ss_pred HHHHhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc--------CHHHHHHHHHHHHhc-CCCCcccceeE
Q 046275 855 LLEATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ--------GDREFTAEMETIGKI-KHRNLVPLLGY 924 (1176)
Q Consensus 855 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~l~~~ 924 (1176)
.....++|.+.+.||+|+||.||+|+++ +|+.||||++...... ..+.+.+|+++++++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3455678999999999999999999986 6999999988653321 134578899999999 79999999999
Q ss_pred EeeCCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEE
Q 046275 925 CKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARV 1004 (1176)
Q Consensus 925 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 1004 (1176)
+......|+||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+|+
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEKV----ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 999999999999999999999998654 689999999999999999999999 9999999999999999999999
Q ss_pred EeeccccccccccccccccccccCCcccCccccCC------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHH
Q 046275 1005 SDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQS------FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGW 1078 (1176)
Q Consensus 1005 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~ 1078 (1176)
+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.... ....
T Consensus 242 ~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~-----~~~~ 313 (365)
T 2y7j_A 242 SDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR-----QILM 313 (365)
T ss_dssp CCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHH
T ss_pred EecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC-----HHHH
Confidence 99999987654322 245679999999999853 358889999999999999999999996532 1112
Q ss_pred HHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1079 VKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1079 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.......... .....+...+ ..+.+++.+||+.||++|||+++++++
T Consensus 314 ~~~i~~~~~~--~~~~~~~~~~------~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 314 LRMIMEGQYQ--FSSPEWDDRS------STVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHHHHTCCC--CCHHHHSSSC------HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHhCCCC--CCCcccccCC------HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2222221111 1111111111 235679999999999999999999875
No 210
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.8e-36 Score=341.44 Aligned_cols=249 Identities=24% Similarity=0.361 Sum_probs=204.4
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC---cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG---QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
.++|.+.+.||+|+||.||+|++. +++.||+|.+..... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357889999999999999999987 578899998865422 2345688899999999999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+++++|.+++...+ .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 94 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999999999987654 689999999999999999999999 99999999999999999999999999998654
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
.... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... ............. .
T Consensus 167 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~------~ 233 (294)
T 2rku_A 167 YDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-----LKETYLRIKKNEY------S 233 (294)
T ss_dssp STTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTCC------C
T ss_pred cCcc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhhccC------C
Confidence 3222 1244678999999999999899999999999999999999999996543 1112222111111 0
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.....+ ..+.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~------~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 234 IPKHIN------PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp CCTTSC------HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CccccC------HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111111 135569999999999999999999987
No 211
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.6e-36 Score=348.03 Aligned_cols=256 Identities=20% Similarity=0.280 Sum_probs=198.6
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcC-CCCcccceeEEee--CCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIK-HRNLVPLLGYCKV--GEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lV~ 935 (1176)
++|++.+.||+|+||+||+|++. +++.||+|++.. ...+.+.+|+.++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 57999999999999999999875 689999998853 34577899999999997 9999999999987 66789999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCC-cEEEEeeccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENF-EARVSDFGMARLMS 1014 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~~~~ 1014 (1176)
||+++++|.+++. .+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++...
T Consensus 113 e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp ECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 9999999999885 478899999999999999999999 999999999999999776 89999999998665
Q ss_pred cccccccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccccc----
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISD---- 1089 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~---- 1089 (1176)
.... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.........+.............+
T Consensus 183 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 183 PGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp TTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHH
Confidence 4332 245578999999999877 67899999999999999999999999654322111111111110000000
Q ss_pred ---ccCcc----------------cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1090 ---VFDPE----------------LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1090 ---~~~~~----------------~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
..++. .....+. .--..+.+++.+||+.||++|||++|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQH--LVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGG--GCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhhhhhccccchhhhccccccc--cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000 0000000 011245679999999999999999999986
No 212
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=347.68 Aligned_cols=263 Identities=24% Similarity=0.403 Sum_probs=206.7
Q ss_pred cCCCCCceEeEeCceEEEEEEE-----CCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCC--eeE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKL-----KDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGE--ERL 932 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~ 932 (1176)
++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4688899999999999999984 368899999987655555667999999999999999999999886544 679
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccc
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1012 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 1012 (1176)
+||||+++|+|.+++...+ ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 121 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp EEECCCTTCBHHHHHHHST---TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEECCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 9999999999999998653 2589999999999999999999999 999999999999999999999999999987
Q ss_pred ccccccccc-ccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC---------CCccH-H-HHHH
Q 046275 1013 MSAMDTHLS-VSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADF---------GDNNL-V-GWVK 1080 (1176)
Q Consensus 1013 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~---------~~~~~-~-~~~~ 1080 (1176)
......... .....++..|+|||++.+..++.++||||||+++|||+||..||..... ..... . ....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence 654332211 2334577889999999888899999999999999999999999753210 00000 0 0001
Q ss_pred HhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhh
Q 046275 1081 QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 1139 (1176)
Q Consensus 1081 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~ 1139 (1176)
...... ........+ ..+.+++.+||+.||++|||+.++++.|++++.
T Consensus 275 ~~~~~~-----~~~~~~~~~------~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 275 LLKNNG-----RLPRPDGCP------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHTTC-----CCCCCTTCC------HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhhcCC-----CCCCCCccc------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111100 011111111 245669999999999999999999999999875
No 213
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.8e-36 Score=348.05 Aligned_cols=249 Identities=24% Similarity=0.364 Sum_probs=204.5
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC---cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG---QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
.++|.+.+.||+|+||.||+|++. +++.||+|.+..... ...+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 457899999999999999999987 478899998865322 2345688999999999999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+++++|.+++...+ .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~e~~~~~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999987654 689999999999999999999999 99999999999999999999999999998664
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
.... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.... .............. ++
T Consensus 193 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~--~~-- 261 (335)
T 2owb_A 193 YDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-----LKETYLRIKKNEYS--IP-- 261 (335)
T ss_dssp STTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCCC--CC--
T ss_pred cCcc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC-----HHHHHHHHhcCCCC--CC--
Confidence 3222 1245679999999999998889999999999999999999999996543 11222211111110 11
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+ ..+.+++.+||+.||++|||++|++++
T Consensus 262 --~~~~------~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 262 --KHIN------PVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp --TTSC------HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred --ccCC------HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1111 134569999999999999999999986
No 214
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.4e-36 Score=335.89 Aligned_cols=247 Identities=23% Similarity=0.370 Sum_probs=196.0
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|.+.+.||+|+||.||+|+++ +|+.||+|.+... .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57899999999999999999987 7999999998643 2234567889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+++++|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG----RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp ECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred eccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 9999999999998664 589999999999999999999999 999999999999999999999999999986643
Q ss_pred ccccccccccccCCcccCccccCCCCC-CchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRC-STKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE 1094 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1094 (1176)
... .....||+.|+|||++.+..+ +.++||||+|+++|+|++|+.||.... ............. .++
T Consensus 164 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~--~~~-- 231 (276)
T 2h6d_A 164 GEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH-----VPTLFKKIRGGVF--YIP-- 231 (276)
T ss_dssp ----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCC--CCC--
T ss_pred Ccc---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHhhcCcc--cCc--
Confidence 221 234578999999999988765 689999999999999999999986532 2222222222111 011
Q ss_pred cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+ ..+.+++.+||+.||++|||+.+++++
T Consensus 232 --~~~~------~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 232 --EYLN------RSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp --TTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --hhcC------HHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1111 135569999999999999999999986
No 215
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=374.73 Aligned_cols=258 Identities=24% Similarity=0.348 Sum_probs=201.1
Q ss_pred CCCCCc-eEeEeCceEEEEEEEC---CCCEEEEEEeeccC-CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 861 GFHNDS-LIGSGGFGDVYKAKLK---DGSTVAIKKLIHIS-GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 861 ~y~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++.+.+ .||+|+||.||+|.++ ++..||||++.... ....+++.+|++++++++|||||++++++.. +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 344444 7999999999999874 45679999986543 3356789999999999999999999999876 5689999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 415 E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp ECCTTCBHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred EeCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 9999999999997543 3689999999999999999999999 999999999999999999999999999987654
Q ss_pred ccccc-cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCc
Q 046275 1016 MDTHL-SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDP 1093 (1176)
Q Consensus 1016 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1093 (1176)
..... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...+. .... .....+.. .
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~---~~i~~~~~-----~ 558 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVM---AFIEQGKR-----M 558 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--HHHH---HHHHTTCC-----C
T ss_pred CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHH---HHHHcCCC-----C
Confidence 33221 1123346789999999998899999999999999999998 9999976432 1122 22222111 1
Q ss_pred ccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1094 ELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1094 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
......+ ..+.+++.+||+.||++|||+.++++.|+++....
T Consensus 559 ~~p~~~~------~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 559 ECPPECP------PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp CCCTTCC------HHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCCCcCC------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 1111122 13556999999999999999999999999986553
No 216
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3.6e-36 Score=340.64 Aligned_cols=250 Identities=26% Similarity=0.380 Sum_probs=206.1
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC-CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS-GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
+.|++.+.||+|+||.||+|++. +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.++...++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 46888999999999999999876 68999999986543 33457789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD 1017 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 1017 (1176)
+++++|.+++... ++++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 102 ~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 173 (303)
T 3a7i_A 102 LGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 173 (303)
T ss_dssp CTTEEHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred CCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence 9999999999753 589999999999999999999999 99999999999999999999999999997664332
Q ss_pred ccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCccccc
Q 046275 1018 THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMK 1097 (1176)
Q Consensus 1018 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1176)
. ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.... ............ .+....
T Consensus 174 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~-----~~~~~~ 241 (303)
T 3a7i_A 174 I--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH-----PMKVLFLIPKNN-----PPTLEG 241 (303)
T ss_dssp C--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSC-----CCCCCS
T ss_pred c--ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC-----HHHHHHHhhcCC-----CCCCcc
Confidence 1 2245678999999999999999999999999999999999999986532 111211111111 111111
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 046275 1098 EDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFK 1135 (1176)
Q Consensus 1098 ~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~ 1135 (1176)
..+. .+.+++.+||+.||++|||+.+++++.-
T Consensus 242 ~~~~------~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 242 NYSK------PLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp SCCH------HHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred ccCH------HHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 2221 3556999999999999999999998743
No 217
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4.8e-36 Score=362.49 Aligned_cols=251 Identities=24% Similarity=0.371 Sum_probs=204.0
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc--CCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI--SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
.++|.+.+.||+|+||+||+|+++ +++.||||++... .......+.+|++++++++||||+++++++.+....|+||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 356999999999999999999986 6899999998642 2345677899999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEEC---CCCcEEEEeeccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLD---ENFEARVSDFGMARL 1012 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfGla~~ 1012 (1176)
||+.+|+|.+++...+ .+++..+..++.|++.||.|||+. +|+||||||+||+++ .++.+||+|||+++.
T Consensus 101 e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 9999999999997664 689999999999999999999999 999999999999995 456799999999986
Q ss_pred cccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1013 MSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1013 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
..... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... .............. ++
T Consensus 174 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~--~~ 242 (486)
T 3mwu_A 174 FQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN-----EYDILKRVETGKYA--FD 242 (486)
T ss_dssp BCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCC--SC
T ss_pred CCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCC--CC
Confidence 64322 2345679999999999876 58999999999999999999999996543 22222222222211 11
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+...+ ..+.+++.+||+.||++|||+.+++++
T Consensus 243 ~~~~~~~s------~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 LPQWRTIS------DDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp SGGGGGSC------HHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CcccCCCC------HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11111111 135579999999999999999999987
No 218
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=4.6e-36 Score=363.25 Aligned_cols=251 Identities=25% Similarity=0.376 Sum_probs=200.9
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC--CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS--GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
.++|++.+.||+|+||+||+|+++ ++..||+|++.... ......+.+|+.+++.++||||+++++++.+....|+||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 346999999999999999999987 68999999986532 334567899999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC---CCcEEEEeeccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE---NFEARVSDFGMARL 1012 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfGla~~ 1012 (1176)
||+++|+|.+++.... ++++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 116 e~~~~g~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999987654 689999999999999999999999 9999999999999976 45599999999987
Q ss_pred cccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1013 MSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1013 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
..... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... .............. ++
T Consensus 189 ~~~~~---~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~--~~ 257 (494)
T 3lij_A 189 FENQK---KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQT-----DQEILRKVEKGKYT--FD 257 (494)
T ss_dssp CBTTB---CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCC--CC
T ss_pred CCCCc---cccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCC--CC
Confidence 65432 2345679999999999874 68999999999999999999999997543 22222222222211 11
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+...+. .+.+++.+||+.||++|||+.+++++
T Consensus 258 ~~~~~~~s~------~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 258 SPEWKNVSE------GAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp SGGGTTSCH------HHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred chhcccCCH------HHHHHHHHHCCCChhhCccHHHHhcC
Confidence 222222221 35579999999999999999999976
No 219
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.2e-36 Score=346.00 Aligned_cols=260 Identities=21% Similarity=0.272 Sum_probs=203.5
Q ss_pred HHHHHHhcCCCCC-ceEeEeCceEEEEEEEC-CCCEEEEEEeeccC--CcCHHHHHHHHHHHHhc-CCCCcccceeEEee
Q 046275 853 ADLLEATNGFHND-SLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS--GQGDREFTAEMETIGKI-KHRNLVPLLGYCKV 927 (1176)
Q Consensus 853 ~~~~~~~~~y~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 927 (1176)
.......++|.+. +.||+|+||+||+|++. +++.||+|++.... ......+.+|+.+++++ +||||+++++++.+
T Consensus 21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~ 100 (327)
T 3lm5_A 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN 100 (327)
T ss_dssp BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence 3344555678777 89999999999999987 58999999886532 23356789999999999 46999999999999
Q ss_pred CCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC---CCcEEE
Q 046275 928 GEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE---NFEARV 1004 (1176)
Q Consensus 928 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl 1004 (1176)
....++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++. ++.+||
T Consensus 101 ~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL 175 (327)
T 3lm5_A 101 TSEIILILEYAAGGEIFSLCLPEL--AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKI 175 (327)
T ss_dssp SSEEEEEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEE
T ss_pred CCeEEEEEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEE
Confidence 999999999999999999986542 23689999999999999999999999 9999999999999987 789999
Q ss_pred EeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhc
Q 046275 1005 SDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAK 1084 (1176)
Q Consensus 1005 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~ 1084 (1176)
+|||+++....... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||...+. .........
T Consensus 176 ~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~i~~ 247 (327)
T 3lm5_A 176 VDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN-----QETYLNISQ 247 (327)
T ss_dssp CCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHH
T ss_pred eeCccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-----hHHHHHHHh
Confidence 99999986643222 2445799999999999999999999999999999999999999965431 111111111
Q ss_pred cccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1085 LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1085 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
... ..........+ ..+.+++.+||+.||++|||+++++++
T Consensus 248 ~~~--~~~~~~~~~~~------~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 248 VNV--DYSEETFSSVS------QLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TCC--CCCTTTTTTSC------HHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ccc--ccCchhhcccC------HHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 111 11111111111 135569999999999999999999876
No 220
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.8e-36 Score=360.03 Aligned_cols=200 Identities=26% Similarity=0.372 Sum_probs=167.1
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeC-----Ce
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVG-----EE 930 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 930 (1176)
.++|.+.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+.++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999986 578899999864322 2345688999999999999999999998766 56
Q ss_pred eEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccc
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1010 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 1010 (1176)
.|+||||++ |+|.+++.... .+++..++.++.||++||.|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI----FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999996 59999997653 689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccc--------------------ccccccccCCcccCcccc-CCCCCCchhhhHHHHHHHHHHHcCCCCCC
Q 046275 1011 RLMSAMDTH--------------------LSVSTLAGTPGYVPPEYY-QSFRCSTKGDVYSYGVVLLELLTGKRPTD 1066 (1176)
Q Consensus 1011 ~~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvil~elltg~~P~~ 1066 (1176)
+........ .......||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 876543211 123567899999999986 56679999999999999999998655553
No 221
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=8.3e-37 Score=343.48 Aligned_cols=255 Identities=22% Similarity=0.295 Sum_probs=187.5
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc-CH-HHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ-GD-REFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
.++|++.+.||+|+||+||+|++. +|+.||+|++...... .. +.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 357889999999999999999985 6889999998643222 12 23444555578889999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+++ +|.+++.........+++..++.++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99974 998888764444457999999999999999999999953 799999999999999999999999999986543
Q ss_pred ccccccccccccCCcccCcccc----CCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccccccc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYY----QSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVF 1091 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1091 (1176)
... .....||+.|+|||++ .+..++.++||||+|+++|+|++|+.||..... ........... ......
T Consensus 163 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~-~~~~~~ 235 (290)
T 3fme_A 163 DVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT---PFQQLKQVVEE-PSPQLP 235 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC---HHHHHHHHHHS-CCCCCC
T ss_pred ccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc---hHHHHHHHhcc-CCCCcc
Confidence 222 2345799999999996 566789999999999999999999999975321 11222221111 111111
Q ss_pred CcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1092 DPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1092 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
. ...+ ..+.+++.+||+.||++|||+.|++++
T Consensus 236 ~----~~~~------~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 236 A----DKFS------AEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp T----TTSC------HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred c----ccCC------HHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 1 1111 135679999999999999999999985
No 222
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.4e-37 Score=360.15 Aligned_cols=244 Identities=17% Similarity=0.183 Sum_probs=188.4
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHHHH---HHHhcCCCCcccce-------eE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAEME---TIGKIKHRNLVPLL-------GY 924 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~l~-------~~ 924 (1176)
.++|.+.+.||+|+||+||+|++. +|+.||||++... .....+.+.+|+. .+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 457888999999999999999974 6999999998643 2233467889994 55556899999998 55
Q ss_pred EeeCC-----------------eeEEEEeeccCCCHHHHHhhccccC---cccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 046275 925 CKVGE-----------------ERLLVYEYMRYGSLEDVLHNQKKVG---IKLNWAARRKIAIGSARGLAFLHHNCIPHI 984 (1176)
Q Consensus 925 ~~~~~-----------------~~~lV~E~~~~gsL~~~l~~~~~~~---~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 984 (1176)
+.+.+ ..|+||||+ +|+|.+++...+... ..+++..++.++.|++.||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 55443 278999999 579999998754221 1345688999999999999999999 99
Q ss_pred eeCCCCCCCEEECCCCcEEEEeeccccccccccccccccccccCCcccCccccCCC-----------CCCchhhhHHHHH
Q 046275 985 IHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSF-----------RCSTKGDVYSYGV 1053 (1176)
Q Consensus 985 vH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwSlGv 1053 (1176)
+||||||+||+++.++.+||+|||+|+.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999985332 2245567 999999999887 8999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1054 VLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1054 il~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
++|||++|+.||........ ...... . ....+ ..+.+++.+||+.||++|||+.+++++
T Consensus 302 il~elltg~~Pf~~~~~~~~-------------~~~~~~-~-~~~~~------~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGG-------------SEWIFR-S-CKNIP------QPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHHHHHHSSCCC------CC-------------SGGGGS-S-CCCCC------HHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHHHHHHCCCCCcccccccc-------------hhhhhh-h-ccCCC------HHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 99999999999965432110 000000 0 01111 135569999999999999999999874
No 223
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.4e-37 Score=350.63 Aligned_cols=260 Identities=23% Similarity=0.336 Sum_probs=194.3
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcC-HHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQG-DREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
++|.+.+.||+|+||+||+|++. +++.||+|++....... ...+.+|+.++++++||||+++++++......++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57899999999999999999987 68999999885432221 22355799999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD 1017 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 1017 (1176)
++ |+|.+++...+ ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG---NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CS-EEHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred cc-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 97 59999987654 2689999999999999999999999 99999999999999999999999999997654322
Q ss_pred ccccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcc--
Q 046275 1018 THLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPE-- 1094 (1176)
Q Consensus 1018 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1094 (1176)
. ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...+.. ...............+.++..
T Consensus 155 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~ 230 (324)
T 3mtl_A 155 K--TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILS 230 (324)
T ss_dssp ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGG
T ss_pred c--ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChHhchhhhc
Confidence 1 2244578999999999876 56899999999999999999999999764321 111111111111111111000
Q ss_pred ----------------cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1095 ----------------LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1095 ----------------~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.....+.. -..+.+++.+||+.||++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 231 NEEFKTYNYPKYRAEALLSHAPRL---DSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CHHHHHTCCCCCCCCCHHHHCTTS---CHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred chhhcccccccccchhhhhhcCCC---CHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000011 1235679999999999999999999986
No 224
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.2e-36 Score=361.47 Aligned_cols=195 Identities=24% Similarity=0.388 Sum_probs=154.7
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEee-----CCe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKV-----GEE 930 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~ 930 (1176)
.++|++.+.||+|+||+||+|+++ +|+.||||++..... ...+.+.+|+.+++.++|||||++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 367999999999999999999886 689999999865322 234568899999999999999999999843 356
Q ss_pred eEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccc
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1010 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 1010 (1176)
.|+||||+. |+|.+++.... .+++..++.++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPV----YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccc-cchhhhcccCC----CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 899999985 69999997653 689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccc-------------------------ccccccccCCcccCcccc-CCCCCCchhhhHHHHHHHHHHHcC
Q 046275 1011 RLMSAMDTH-------------------------LSVSTLAGTPGYVPPEYY-QSFRCSTKGDVYSYGVVLLELLTG 1061 (1176)
Q Consensus 1011 ~~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvil~elltg 1061 (1176)
+........ ......+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 876432211 123456789999999986 566799999999999999999993
No 225
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3.1e-36 Score=340.99 Aligned_cols=253 Identities=25% Similarity=0.369 Sum_probs=199.4
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
.++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++..++..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 457999999999999999999987 5899999998766666677899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccccc
Q 046275 938 MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD 1017 (1176)
Q Consensus 938 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 1017 (1176)
+++++|.+++.... ..+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (302)
T 2j7t_A 98 CPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171 (302)
T ss_dssp CTTEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred CCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence 99999999987643 2589999999999999999999999 99999999999999999999999999876432211
Q ss_pred ccccccccccCCcccCcccc-----CCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1018 THLSVSTLAGTPGYVPPEYY-----QSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1018 ~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
.......||+.|+|||++ ....++.++||||||+++|+|++|+.||...+ ..................
T Consensus 172 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~ 244 (302)
T 2j7t_A 172 --QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKSDPPTLLT 244 (302)
T ss_dssp --HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCCSS
T ss_pred --cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC-----HHHHHHHHhccCCcccCC
Confidence 112345789999999998 46678999999999999999999999987543 112222222222111111
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
+.. .+ ..+.+++.+||+.||++|||+.+++++
T Consensus 245 ~~~---~~------~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 245 PSK---WS------VEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp GGG---SC------HHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ccc---cC------HHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 111 11 135579999999999999999999875
No 226
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=8.2e-37 Score=346.77 Aligned_cols=260 Identities=33% Similarity=0.540 Sum_probs=229.8
Q ss_pred ccCcEEEcCCccccC--CCCccccCCCccCeeeccc-ccccCCCCCCCCCccccceeecccccccCccccccccCCCCCe
Q 046275 424 SQLVSLHLSFNYLTG--TIPSSLGSLSKLQDLKLWL-NQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNW 500 (1176)
Q Consensus 424 ~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 500 (1176)
.+++.|+|++|.+++ .+|..+.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 467778888888877 7788888888888888884 8888888888888888888888888888888888888999999
Q ss_pred eeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCC-CCCEEEccCCCCcccCChhHHhhcccchhhhcccc
Q 046275 501 ISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCR-SLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGK 579 (1176)
Q Consensus 501 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~ 579 (1176)
|+|++|++++.+|..++.+++|++|+|++|+++|.+|..++.++ +|+.|+|++|+++|.+|..+..
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~------------- 196 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN------------- 196 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGG-------------
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhC-------------
Confidence 99999999888898899999999999999999888999999887 8999999999998877764321
Q ss_pred ceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCcccccc
Q 046275 580 KYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSM 659 (1176)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l 659 (1176)
+ .|++|||++|++++.+|..|+.+
T Consensus 197 -------------------------------------------------------l-~L~~L~Ls~N~l~~~~~~~~~~l 220 (313)
T 1ogq_A 197 -------------------------------------------------------L-NLAFVDLSRNMLEGDASVLFGSD 220 (313)
T ss_dssp -------------------------------------------------------C-CCSEEECCSSEEEECCGGGCCTT
T ss_pred -------------------------------------------------------C-cccEEECcCCcccCcCCHHHhcC
Confidence 1 27789999999999999999999
Q ss_pred ccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCccccccccccccccccccCCCCCCCCccccCCcccc
Q 046275 660 SYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLTGMIPVMGQFETFQPAKFL 739 (1176)
Q Consensus 660 ~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~ 739 (1176)
++|+.|+|++|++++.+|. ++.+++|++|+|++|+|+|.+|..+..+++|+.|+|++|+++|.+|..+++..+....+.
T Consensus 221 ~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~ 299 (313)
T 1ogq_A 221 KNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYA 299 (313)
T ss_dssp SCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTC
T ss_pred CCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhc
Confidence 9999999999999987776 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCC
Q 046275 740 NNSGLCGLPLPPCE 753 (1176)
Q Consensus 740 ~n~~l~~~~~~~c~ 753 (1176)
+|+++||.|+++|.
T Consensus 300 ~N~~lc~~p~~~C~ 313 (313)
T 1ogq_A 300 NNKCLCGSPLPACT 313 (313)
T ss_dssp SSSEEESTTSSCCC
T ss_pred CCCCccCCCCCCCC
Confidence 99999999999984
No 227
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.8e-36 Score=364.72 Aligned_cols=250 Identities=25% Similarity=0.387 Sum_probs=205.6
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC---CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS---GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|++.+.||+|+||.||+|+++ +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+....|+||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46999999999999999999987 78999999986432 344677999999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE---CCCCcEEEEeeccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL---DENFEARVSDFGMARL 1012 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~ 1012 (1176)
||+.+|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 106 e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 106 EVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp CCCCSCBHHHHHHTCS----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred ecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 9999999999997654 689999999999999999999999 99999999999999 5678999999999987
Q ss_pred cccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccC
Q 046275 1013 MSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFD 1092 (1176)
Q Consensus 1013 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1176)
...... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...+ .............. ++
T Consensus 179 ~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~--~~ 247 (484)
T 3nyv_A 179 FEASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN-----EYDILKKVEKGKYT--FE 247 (484)
T ss_dssp BCCCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC--CC
T ss_pred cccccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCCCC--CC
Confidence 654322 244579999999999876 68999999999999999999999997543 22222222222211 11
Q ss_pred cccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1093 PELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1093 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+...+ ..+.+++.+||+.||++|||+.|+++|
T Consensus 248 ~~~~~~~s------~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 248 LPQWKKVS------ESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp SGGGGGSC------HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CcccccCC------HHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 11111111 135579999999999999999999987
No 228
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.4e-36 Score=347.88 Aligned_cols=265 Identities=21% Similarity=0.286 Sum_probs=192.9
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc--CHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEE
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ--GDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
..++|++.+.||+|+||+||+|++. +++.||+|++...... ..+.+.+|+.++++++||||+++++++.++...++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 4468999999999999999999876 6889999988643322 234577899999999999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE-----CCCCcEEEEeecc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL-----DENFEARVSDFGM 1009 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll-----~~~~~~kl~DfGl 1009 (1176)
|||+++ +|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 112 ~e~~~~-~L~~~~~~~~----~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDKNP----DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCSE-EHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCCC-CHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999985 9999998664 589999999999999999999999 99999999999999 4555699999999
Q ss_pred ccccccccccccccccccCCcccCccccCCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccc--
Q 046275 1010 ARLMSAMDTHLSVSTLAGTPGYVPPEYYQSF-RCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLK-- 1086 (1176)
Q Consensus 1010 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~-- 1086 (1176)
++....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+...........
T Consensus 184 a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~ 260 (329)
T 3gbz_A 184 ARAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEVLGLPDDT 260 (329)
T ss_dssp HHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTT
T ss_pred ccccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHHhCCCchh
Confidence 986643222 22445789999999999774 4899999999999999999999999754311 11111111110000
Q ss_pred -cccc-----cCcccccCCCc-hHH-----HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1087 -ISDV-----FDPELMKEDPN-IEI-----ELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1087 -~~~~-----~~~~~~~~~~~-~~~-----~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.... ........... ... .-..+.+++.+||+.||++|||++|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 261 TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000 00000000000 000 01345679999999999999999999875
No 229
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=8.6e-36 Score=361.79 Aligned_cols=252 Identities=25% Similarity=0.344 Sum_probs=203.4
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC-------------cCHHHHHHHHHHHHhcCCCCccccee
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG-------------QGDREFTAEMETIGKIKHRNLVPLLG 923 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 923 (1176)
..++|.+.+.||+|+||+||+|+++ +++.||+|++..... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4568999999999999999999987 588999999864321 23467889999999999999999999
Q ss_pred EEeeCCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCC---
Q 046275 924 YCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENF--- 1000 (1176)
Q Consensus 924 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 1000 (1176)
++.+....|+||||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCc
Confidence 9999999999999999999999997654 689999999999999999999999 999999999999998775
Q ss_pred cEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHH
Q 046275 1001 EARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVK 1080 (1176)
Q Consensus 1001 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~ 1080 (1176)
.+||+|||+++...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... ......
T Consensus 187 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~ 257 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQN-----DQDIIK 257 (504)
T ss_dssp SEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHH
T ss_pred cEEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHH
Confidence 69999999998765432 2345679999999999875 68999999999999999999999997543 222333
Q ss_pred HhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1081 QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1081 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
........ ++...+...+ ..+.+++.+||+.||.+|||++|++++
T Consensus 258 ~i~~~~~~--~~~~~~~~~s------~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 258 KVEKGKYY--FDFNDWKNIS------DEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHHCCCC--CCHHHHTTSC------HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHcCCCC--CCccccCCCC------HHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 33222211 1111122222 235679999999999999999999886
No 230
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-36 Score=354.46 Aligned_cols=270 Identities=21% Similarity=0.289 Sum_probs=200.7
Q ss_pred HHhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEee--------
Q 046275 857 EATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKV-------- 927 (1176)
Q Consensus 857 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 927 (1176)
...++|++.+.||+|+||+||+|++. +|+.||+|++.... +...+|+++++.++||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 45678999999999999999999885 69999999986432 223479999999999999999999844
Q ss_pred ------------------------------CCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHH
Q 046275 928 ------------------------------GEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLH 977 (1176)
Q Consensus 928 ------------------------------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH 977 (1176)
....++||||++ |+|.+.+......+..+++..++.++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 334789999998 5888888765444457999999999999999999999
Q ss_pred hcCCCCeeeCCCCCCCEEEC-CCCcEEEEeeccccccccccccccccccccCCcccCccccCCC-CCCchhhhHHHHHHH
Q 046275 978 HNCIPHIIHRDMKSSNVLLD-ENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSF-RCSTKGDVYSYGVVL 1055 (1176)
Q Consensus 978 ~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil 1055 (1176)
+. +|+||||||+||+++ .++.+||+|||+|+....... .....||+.|+|||++.+. .++.++||||+||++
T Consensus 159 ~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 159 SL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp TT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 99 999999999999997 688999999999986644332 2445789999999998765 489999999999999
Q ss_pred HHHHcCCCCCCCCCCCCccHHHHHHHhhcc---------------ccccccCcccccCCCchHHHHHHHHHHHHHhccCC
Q 046275 1056 LELLTGKRPTDSADFGDNNLVGWVKQHAKL---------------KISDVFDPELMKEDPNIEIELLQHLHVASACLDDR 1120 (1176)
Q Consensus 1056 ~elltg~~P~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d 1120 (1176)
|||++|+.||...+.. ..+.......... ..............+.. .-..+.+++.+||+.|
T Consensus 233 ~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~d 309 (383)
T 3eb0_A 233 GELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEG--TPSLAIDLLEQILRYE 309 (383)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTT--CCHHHHHHHHHHCCSS
T ss_pred HHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCC--CCHHHHHHHHHHccCC
Confidence 9999999999764311 1111111110000 00000000000000000 0123567999999999
Q ss_pred CCCCCCHHHHHHH--HHHHhhC
Q 046275 1121 PWRRPTMIQVMAM--FKEIQAG 1140 (1176)
Q Consensus 1121 p~~RPt~~evl~~--L~~i~~~ 1140 (1176)
|++|||+.|+++| +++++..
T Consensus 310 P~~R~t~~e~l~hp~f~~~~~~ 331 (383)
T 3eb0_A 310 PDLRINPYEAMAHPFFDHLRNS 331 (383)
T ss_dssp GGGSCCHHHHHTSGGGHHHHHC
T ss_pred hhhCCCHHHHhcCHHHHHHHhh
Confidence 9999999999976 6666553
No 231
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=5.2e-36 Score=348.42 Aligned_cols=269 Identities=23% Similarity=0.300 Sum_probs=199.0
Q ss_pred CHHHHHHHhcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcC-----------HHHHHHHHHHHHhcCCCCcc
Q 046275 851 TFADLLEATNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQG-----------DREFTAEMETIGKIKHRNLV 919 (1176)
Q Consensus 851 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv 919 (1176)
.+.++....++|.+.+.||+|+||.||+|++.+|+.||||++....... .+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4567788899999999999999999999999889999999985432221 26789999999999999999
Q ss_pred cceeEEee-----CCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCE
Q 046275 920 PLLGYCKV-----GEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNV 994 (1176)
Q Consensus 920 ~l~~~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NI 994 (1176)
++++++.. ....|+||||++ |+|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR---IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 99999844 336799999998 58988887543 3689999999999999999999999 999999999999
Q ss_pred EECCCCcEEEEeeccccccccccccccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCc
Q 046275 995 LLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN 1073 (1176)
Q Consensus 995 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~ 1073 (1176)
+++.++.+||+|||+++....... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.......
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~- 241 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTADAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN- 241 (362)
T ss_dssp EECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-
T ss_pred EEcCCCCEEEEecCcccccccccc---cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-
Confidence 999999999999999975433222 244578999999999876 678999999999999999999999997643110
Q ss_pred cHHHHHHHhhccc------------------cccccCcc-cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1074 NLVGWVKQHAKLK------------------ISDVFDPE-LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1074 ~~~~~~~~~~~~~------------------~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.+........... ........ .....+.. -..+.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 242 QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTA---DPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCC---CHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0111111000000 00000000 00000011 1235679999999999999999999986
No 232
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.3e-36 Score=350.30 Aligned_cols=256 Identities=22% Similarity=0.321 Sum_probs=199.1
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC-cCHHHHHHHHHH-HHhcCCCCcccceeEEeeCCeeEEE
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG-QGDREFTAEMET-IGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
..++|++.+.||+|+||+||+|++. +|+.||||++..... ....++..|..+ ++.++||||+++++++..++..|+|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 3467889999999999999999985 689999999865322 223445566655 6778999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+++ +|.+++.........+++..++.++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 999975 999998764433457999999999999999999999742 79999999999999999999999999998664
Q ss_pred cccccccccccccCCcccCccccC----CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccc
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQ----SFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDV 1090 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1090 (1176)
... ......||+.|+|||++. ...++.++|||||||++|||++|+.||..... ......... .......
T Consensus 206 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~---~~~~~~~~~-~~~~~~~ 278 (340)
T 3an0_A 206 DSV---AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT---PFQQLKQVV-EEPSPQL 278 (340)
T ss_dssp CHH---HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC---HHHHHHHHH-HSCCCCC
T ss_pred ccc---ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc---hHHHHHHHh-cCCCCCC
Confidence 321 123457999999999964 34789999999999999999999999975321 111111111 1111110
Q ss_pred cCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1091 FDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1091 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.+ ...+ ..+.+++.+||+.||++|||+.|++++
T Consensus 279 -~~---~~~~------~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 279 -PA---DKFS------AEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp -CG---GGSC------HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -Cc---ccCC------HHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 00 1111 235679999999999999999999986
No 233
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.2e-36 Score=343.88 Aligned_cols=256 Identities=28% Similarity=0.415 Sum_probs=197.6
Q ss_pred HHHHhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhc-CCCCcccceeEEee-----
Q 046275 855 LLEATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKI-KHRNLVPLLGYCKV----- 927 (1176)
Q Consensus 855 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----- 927 (1176)
+....++|++.+.||+|+||.||+|++. +|+.||+|++... ....+.+.+|+.+++++ +||||+++++++..
T Consensus 19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC-cccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 3345678999999999999999999985 6899999988643 34456789999999999 89999999999976
Q ss_pred -CCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEe
Q 046275 928 -GEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSD 1006 (1176)
Q Consensus 928 -~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 1006 (1176)
....++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECC
T ss_pred ccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEee
Confidence 467899999999999999998653 23689999999999999999999999 999999999999999999999999
Q ss_pred eccccccccccccccccccccCCcccCccccC-----CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHH
Q 046275 1007 FGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQ-----SFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQ 1081 (1176)
Q Consensus 1007 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~ 1081 (1176)
||++........ ......||+.|+|||++. +..++.++|||||||++|+|++|+.||..... ......
T Consensus 173 fg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~ 245 (326)
T 2x7f_A 173 FGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-----MRALFL 245 (326)
T ss_dssp CTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHH
T ss_pred CcCceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH-----HHHHHH
Confidence 999876543211 123457899999999986 56788999999999999999999999864331 111111
Q ss_pred hhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1082 HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1082 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
........... ...+ ..+.+++.+||+.||++|||+++++++
T Consensus 246 ~~~~~~~~~~~----~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 246 IPRNPAPRLKS----KKWS------KKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHSCCCCCSC----SCSC------HHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhcCccccCCc----cccC------HHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11111111111 1111 145569999999999999999999885
No 234
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=4.8e-37 Score=349.50 Aligned_cols=261 Identities=22% Similarity=0.294 Sum_probs=197.5
Q ss_pred cCHHHHHHHhcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcC--CCCcccceeEE
Q 046275 850 LTFADLLEATNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISG--QGDREFTAEMETIGKIK--HRNLVPLLGYC 925 (1176)
Q Consensus 850 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--h~niv~l~~~~ 925 (1176)
+.++.+....++|++.+.||+|+||.||+|++.+++.||+|++..... ...+.+.+|+.++++++ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 333334445567999999999999999999998899999999864322 23456889999999997 59999999999
Q ss_pred eeCCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEE
Q 046275 926 KVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVS 1005 (1176)
Q Consensus 926 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 1005 (1176)
..+...++||| +.+++|.+++...+ .+++..++.++.|+++||.|||+. +|+||||||+||++++ +.+||+
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~ 168 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLI 168 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEEC
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEe
Confidence 99999999999 55789999998654 689999999999999999999999 9999999999999965 799999
Q ss_pred eeccccccccccccccccccccCCcccCccccCC-----------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCcc
Q 046275 1006 DFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQS-----------FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNN 1074 (1176)
Q Consensus 1006 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~ 1074 (1176)
|||+++...............||+.|+|||++.+ ..++.++||||||+++|||++|+.||..... .
T Consensus 169 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---~ 245 (313)
T 3cek_A 169 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---Q 245 (313)
T ss_dssp CCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS---H
T ss_pred eccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH---H
Confidence 9999987654333222345579999999999875 4788899999999999999999999965321 1
Q ss_pred HHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1075 LVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1075 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
. ............ .......+ ..+.+++.+||+.||++|||++|++++
T Consensus 246 ~-~~~~~~~~~~~~----~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 246 I-SKLHAIIDPNHE----IEFPDIPE------KDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp H-HHHHHHHCTTSC----CCCCCCSC------HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred H-HHHHHHHhcccc----cCCcccch------HHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1 111111111111 11111111 135569999999999999999999987
No 235
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-36 Score=346.23 Aligned_cols=267 Identities=24% Similarity=0.323 Sum_probs=196.9
Q ss_pred HHhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc-----CHHHHHHHHHHHHhcCCCCcccceeEEeeCCe
Q 046275 857 EATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ-----GDREFTAEMETIGKIKHRNLVPLLGYCKVGEE 930 (1176)
Q Consensus 857 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 930 (1176)
...++|++.+.||+|+||.||+|++. +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.....
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34568999999999999999999986 5899999988643221 12467899999999999999999999999999
Q ss_pred eEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccc
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1010 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 1010 (1176)
.++||||+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC---SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred eEEEEEcCCC-CHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 9999999986 8998887653 3588899999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccccccccCCcccCccccCCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcc---c
Q 046275 1011 RLMSAMDTHLSVSTLAGTPGYVPPEYYQSF-RCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKL---K 1086 (1176)
Q Consensus 1011 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~ 1086 (1176)
+....... ......||+.|+|||++.+. .++.++||||+||++|||++|..||...... ..+.......... .
T Consensus 160 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~ 236 (346)
T 1ua2_A 160 KSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQ 236 (346)
T ss_dssp STTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTT
T ss_pred eeccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCCChhh
Confidence 87643222 22456789999999998654 5899999999999999999999998654311 1111111111110 0
Q ss_pred cccccC--cc-cccCCCch-H-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1087 ISDVFD--PE-LMKEDPNI-E-----IELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1087 ~~~~~~--~~-~~~~~~~~-~-----~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
+.+... .. .....+.. . ..-..+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000000 00 00000000 0 001346679999999999999999999987
No 236
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.3e-36 Score=372.91 Aligned_cols=250 Identities=23% Similarity=0.357 Sum_probs=197.2
Q ss_pred ceEeEeCceEEEEEEEC---CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEeeccC
Q 046275 866 SLIGSGGFGDVYKAKLK---DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRY 940 (1176)
Q Consensus 866 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 940 (1176)
+.||+|+||.||+|.+. .++.||||++..... ...+++.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999663 467899999865332 235679999999999999999999999864 568899999999
Q ss_pred CCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccccccc
Q 046275 941 GSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHL 1020 (1176)
Q Consensus 941 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 1020 (1176)
|+|.+++...+ .+++..++.++.||+.||+|||++ +||||||||+||+++.++.+||+|||+++.........
T Consensus 454 g~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999997654 689999999999999999999999 99999999999999999999999999998765433221
Q ss_pred -cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccccCcccccC
Q 046275 1021 -SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKE 1098 (1176)
Q Consensus 1021 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1176)
......||+.|+|||++.+..++.++|||||||++|||++ |+.||..... ............ ......
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-----~~~~~~i~~~~~-----~~~p~~ 596 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-----SEVTAMLEKGER-----MGCPAG 596 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----HHHHHHHHTTCC-----CCCCTT
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCC-----CCCCCC
Confidence 2234457889999999999899999999999999999998 9999975431 122222222211 111111
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhh
Q 046275 1099 DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 1139 (1176)
Q Consensus 1099 ~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~ 1139 (1176)
.+ ..+.+++.+||+.||++|||+++|++.|+++..
T Consensus 597 ~~------~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 597 CP------REMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp CC------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CC------HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 22 235569999999999999999999999998764
No 237
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.3e-36 Score=338.77 Aligned_cols=259 Identities=24% Similarity=0.366 Sum_probs=196.4
Q ss_pred cCCCCCceEeEeCceEEEEEEEC--CCC--EEEEEEeeccC---CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK--DGS--TVAIKKLIHIS---GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERL 932 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 932 (1176)
++|++.+.||+|+||+||+|++. +++ .||+|++.... ....+.+.+|++++++++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 46889999999999999999864 333 68999875432 233467889999999999999999999987655 88
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccc
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1012 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 1012 (1176)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 97 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeEecccCCCHHHHHHhcc---CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 9999999999999998653 2589999999999999999999999 999999999999999999999999999987
Q ss_pred cccccccc-cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccccc
Q 046275 1013 MSAMDTHL-SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDV 1090 (1176)
Q Consensus 1013 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1090 (1176)
........ ......+|+.|+|||++.+..++.++||||||+++|+|++ |+.||...+ ..............
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~-- 243 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN-----GSQILHKIDKEGER-- 243 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTSCCC--
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC-----HHHHHHHHHccCCC--
Confidence 65433221 1234567889999999988889999999999999999999 999997543 12222222221111
Q ss_pred cCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhC
Q 046275 1091 FDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAG 1140 (1176)
Q Consensus 1091 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~ 1140 (1176)
.......+ ..+.+++.+||+.||++|||+.+++++|+++.+.
T Consensus 244 --~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 244 --LPRPEDCP------QDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp --CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred --CCCCcCcC------HHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 11111111 2356699999999999999999999999988754
No 238
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.9e-35 Score=353.17 Aligned_cols=267 Identities=22% Similarity=0.300 Sum_probs=208.6
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCC-CCcccceeEEeeCCeeEEEEe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKH-RNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~E 936 (1176)
.++|.+.+.||+|+||.||+|++. +++.||||++..... ..++.+|+++++.++| +++..+..++......++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 468999999999999999999985 689999998754332 3457899999999987 556666666778888999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE---CCCCcEEEEeecccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL---DENFEARVSDFGMARLM 1013 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~~ 1013 (1176)
|+ +++|.+++.... ..+++.+++.++.||+.||+|||+. +||||||||+|||+ +.++.+||+|||+++.+
T Consensus 84 ~~-g~sL~~ll~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred CC-CCCHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 99 899999998543 2699999999999999999999999 99999999999999 58899999999999876
Q ss_pred ccccccc-----cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccc
Q 046275 1014 SAMDTHL-----SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKIS 1088 (1176)
Q Consensus 1014 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1088 (1176)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..............
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~--~~~~~~~i~~~~~~ 234 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT--KKQKYEKISEKKVA 234 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS--HHHHHHHHHHHHHH
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh--HHHHHHHHhhcccc
Confidence 5433221 1235679999999999999999999999999999999999999997654221 11111111111111
Q ss_pred cccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCCCC
Q 046275 1089 DVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 1143 (1176)
Q Consensus 1089 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~~~ 1143 (1176)
... ..+....+ .++.+++.+||+.||++||++.+|++.|+++....+.
T Consensus 235 ~~~-~~l~~~~p------~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~ 282 (483)
T 3sv0_A 235 TSI-EALCRGYP------TEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGF 282 (483)
T ss_dssp SCH-HHHHTTSC------HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred ccH-HHHhcCCc------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCC
Confidence 100 01111112 1456799999999999999999999999999765443
No 239
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.2e-36 Score=341.93 Aligned_cols=252 Identities=26% Similarity=0.383 Sum_probs=199.8
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
..++|++.+.||+|+||.||+|++. +|+.||+|++... ...+.+.+|+.++++++||||+++++++......++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 3467999999999999999999987 5899999998643 345678999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAM 1016 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 1016 (1176)
|+++|+|.+++.... ..+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 105 ~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 105 YCGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp CCTTEEHHHHHHHHT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred cCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 999999999997432 3689999999999999999999999 9999999999999999999999999999765432
Q ss_pred cccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcccc
Q 046275 1017 DTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELM 1096 (1176)
Q Consensus 1017 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1176)
.. ......||+.|+|||++.+..++.++||||||+++|+|++|+.||..... .................+..
T Consensus 179 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~- 250 (314)
T 3com_A 179 MA--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP-----MRAIFMIPTNPPPTFRKPEL- 250 (314)
T ss_dssp BS--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHSCCCCCSSGGG-
T ss_pred cc--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHhcCCCcccCCccc-
Confidence 21 22445789999999999999999999999999999999999999965431 11111111111111111111
Q ss_pred cCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1097 KEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1097 ~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.+ ..+.+++.+||+.||++|||+.+++++
T Consensus 251 --~~------~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 251 --WS------DNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp --SC------HHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred --CC------HHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11 235679999999999999999999886
No 240
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=336.39 Aligned_cols=252 Identities=21% Similarity=0.352 Sum_probs=200.0
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC----CcCHHHHHHHHHHHHhcCCCCcccceeEE--eeCCee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS----GQGDREFTAEMETIGKIKHRNLVPLLGYC--KVGEER 931 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~--~~~~~~ 931 (1176)
.++|.+.+.||+|+||.||+|++. +++.||+|.+.... ....+.+.+|++++++++||||+++++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999986 68999999986432 23456789999999999999999999998 445678
Q ss_pred EEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccc
Q 046275 932 LLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1011 (1176)
Q Consensus 932 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 1011 (1176)
++||||++++ +.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999876 778776543 23689999999999999999999999 99999999999999999999999999998
Q ss_pred ccccccccccccccccCCcccCccccCCCC--CCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccccc
Q 046275 1012 LMSAMDTHLSVSTLAGTPGYVPPEYYQSFR--CSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISD 1089 (1176)
Q Consensus 1012 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 1089 (1176)
...............||+.|+|||++.+.. ++.++||||+|+++|||++|+.||...+ .............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~i~~~~~-- 230 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKLFENIGKGSY-- 230 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHCCC--
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHhcCCC--
Confidence 765433333334567999999999987644 4789999999999999999999987532 2222222222211
Q ss_pred ccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1090 VFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1090 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
......+ ..+.+++.+||+.||++|||++|++++
T Consensus 231 ----~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 ----AIPGDCG------PPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----CCCSSSC------HHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----CCCCccC------HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111111 134569999999999999999999987
No 241
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.3e-36 Score=347.35 Aligned_cols=257 Identities=25% Similarity=0.338 Sum_probs=193.0
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeCC------
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVGE------ 929 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 929 (1176)
.++|++.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 357899999999999999999986 699999999854322 22356889999999999999999999997653
Q ss_pred eeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecc
Q 046275 930 ERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGM 1009 (1176)
Q Consensus 930 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 1009 (1176)
..|+||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 459999999 78999999753 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcc---
Q 046275 1010 ARLMSAMDTHLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKL--- 1085 (1176)
Q Consensus 1010 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~--- 1085 (1176)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+ .+..........
T Consensus 175 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~ 248 (367)
T 1cm8_A 175 ARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAE 248 (367)
T ss_dssp CEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHH
T ss_pred ccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHH
Confidence 9865432 234578999999999876 678999999999999999999999997643211 010000000000
Q ss_pred ---------------ccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1086 ---------------KISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1086 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+..........+... ..+.+++.+||+.||++|||++|+++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 249 FVQRLQSDEAKNYMKGLPELEKKDFASILTNAS---PLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCC---HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCC---HHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000000011111111111 245679999999999999999999986
No 242
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.3e-36 Score=353.30 Aligned_cols=266 Identities=26% Similarity=0.325 Sum_probs=196.1
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCC------eeEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGE------ERLL 933 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~l 933 (1176)
.+|++.+.||+|+||+||+|++..+..||+|++..... ...+|+++++.++||||+++++++.... ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 46889999999999999999998777899999864322 2236999999999999999999985543 3789
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEEC-CCCcEEEEeeccccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLD-ENFEARVSDFGMARL 1012 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfGla~~ 1012 (1176)
||||+++ ++.+.+.........+++..++.++.|+++||+|||+. +|+||||||+||+++ .++.+||+|||+|+.
T Consensus 116 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 116 VLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 9999987 55555443333344799999999999999999999999 999999999999998 799999999999987
Q ss_pred cccccccccccccccCCcccCccccCCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhc-------
Q 046275 1013 MSAMDTHLSVSTLAGTPGYVPPEYYQSF-RCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAK------- 1084 (1176)
Q Consensus 1013 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~------- 1084 (1176)
...... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||...+.. ..+....+....
T Consensus 192 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~ 267 (394)
T 4e7w_A 192 LIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQIK 267 (394)
T ss_dssp CCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHH
T ss_pred ccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHH
Confidence 644332 2345789999999998764 5899999999999999999999999764311 111111111000
Q ss_pred ---cccccccCcccccCCCchH----HHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHHHh
Q 046275 1085 ---LKISDVFDPELMKEDPNIE----IELLQHLHVASACLDDRPWRRPTMIQVMAM--FKEIQ 1138 (1176)
Q Consensus 1085 ---~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~dp~~RPt~~evl~~--L~~i~ 1138 (1176)
....+..-+.... .+... ..-..+.+++.+||+.||++|||+.|+++| +++++
T Consensus 268 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 268 TMNPNYMEHKFPQIRP-HPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp HHCGGGSSSCCCCCCC-CCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred hhChhhhhhccccccC-CcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 0000000000000 00000 001246679999999999999999999987 55444
No 243
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.1e-35 Score=346.27 Aligned_cols=257 Identities=24% Similarity=0.303 Sum_probs=191.4
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeCC------e
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVGE------E 930 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 930 (1176)
++|++.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 57999999999999999999886 688999999864322 22356889999999999999999999997654 7
Q ss_pred eEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccc
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1010 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 1010 (1176)
.|+||||+++ +|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 174 (371)
T ss_dssp EEEEEECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred eEEEEEcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecc
Confidence 8999999975 78888852 488999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccc---
Q 046275 1011 RLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKI--- 1087 (1176)
Q Consensus 1011 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~--- 1087 (1176)
+...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...+. ...+.........
T Consensus 175 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~i~~~~~~~~~ 247 (371)
T 2xrw_A 175 RTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH----IDQWNKVIEQLGTPCP 247 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHC-CCCCCH
T ss_pred ccccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCH
Confidence 8654321 22446799999999999999999999999999999999999999976431 1111111110000
Q ss_pred -------------------------ccccCcccccCCCc-hHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1088 -------------------------SDVFDPELMKEDPN-IEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1088 -------------------------~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.+.+.......... .......+.+++.+||+.||++|||++|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00000000000010 11123457789999999999999999999987
No 244
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.9e-36 Score=373.95 Aligned_cols=249 Identities=22% Similarity=0.304 Sum_probs=204.9
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc---CCcCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCeeEE
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI---SGQGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEERLL 933 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 933 (1176)
.++|++.+.||+|+||+||+|+++ +++.||||++.+. .....+.+..|..++..+ +||+|+++++++.+.+..|+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 467999999999999999999987 5889999998642 233456678899999987 79999999999999999999
Q ss_pred EEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 934 VYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 934 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
||||+++|+|.+++...+ .+++..++.++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+..
T Consensus 420 V~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEeCcCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 999999999999998765 689999999999999999999999 9999999999999999999999999999854
Q ss_pred ccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCc
Q 046275 1014 SAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDP 1093 (1176)
Q Consensus 1014 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1093 (1176)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+ .......+..... .+++
T Consensus 493 ~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~-----~~~~~~~i~~~~~--~~p~ 563 (674)
T 3pfq_A 493 IWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-----EDELFQSIMEHNV--AYPK 563 (674)
T ss_dssp CCTTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHSSCC--CCCT
T ss_pred ccCCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhCCC--CCCc
Confidence 32221 2356789999999999999999999999999999999999999997543 2223333322221 1111
Q ss_pred ccccCCCchHHHHHHHHHHHHHhccCCCCCCCCH-----HHHHHH
Q 046275 1094 ELMKEDPNIEIELLQHLHVASACLDDRPWRRPTM-----IQVMAM 1133 (1176)
Q Consensus 1094 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~-----~evl~~ 1133 (1176)
. .+ ..+.+++.+||+.||++||++ +||++|
T Consensus 564 ~----~s------~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 564 S----MS------KEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp T----SC------HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred c----CC------HHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 1 11 135669999999999999997 666553
No 245
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.4e-35 Score=343.26 Aligned_cols=265 Identities=23% Similarity=0.354 Sum_probs=200.6
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEee--------C
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKV--------G 928 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 928 (1176)
++|++.+.||+|+||+||+|++. +|+.||+|++..... .....+.+|+.++++++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 57899999999999999999985 789999998854332 234568899999999999999999999877 3
Q ss_pred CeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeec
Q 046275 929 EERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFG 1008 (1176)
Q Consensus 929 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 1008 (1176)
+..++||||+++ ++.+.+.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVL---VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ceEEEEEeccCC-CHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 468999999975 8888876543 2589999999999999999999999 99999999999999999999999999
Q ss_pred cccccccccc--cccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcc
Q 046275 1009 MARLMSAMDT--HLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKL 1085 (1176)
Q Consensus 1009 la~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 1085 (1176)
+++....... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ............
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~ 247 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ--HQLALISQLCGS 247 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCC
Confidence 9987653222 112345678999999999876 45799999999999999999999999764311 111111111111
Q ss_pred ccccccCc----c-------cccCCCchHHHH------HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1086 KISDVFDP----E-------LMKEDPNIEIEL------LQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1086 ~~~~~~~~----~-------~~~~~~~~~~~~------~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
...+..+. . ...........+ ..+.+++.+||+.||++|||++|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 248 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00010000 0 000111111111 236689999999999999999999987
No 246
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.5e-36 Score=344.25 Aligned_cols=264 Identities=26% Similarity=0.395 Sum_probs=198.3
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcC--HHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQG--DREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
++|++.+.||+|+||.||+|++. +|+.||+|++....... .+.+.+|+.++++++||||+++++++.+....++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 57889999999999999999987 58999999986543322 3457889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAM 1016 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 1016 (1176)
|+++++|.++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 105 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 105 FVDHTILDDLELFPN----GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp CCSEEHHHHHHHSTT----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred cCCcchHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 999999988876543 589999999999999999999999 9999999999999999999999999999765432
Q ss_pred cccccccccccCCcccCccccCCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHh-----------hc
Q 046275 1017 DTHLSVSTLAGTPGYVPPEYYQSF-RCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQH-----------AK 1084 (1176)
Q Consensus 1017 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~-----------~~ 1084 (1176)
.. ......||+.|+|||++.+. .++.++||||+||++|+|++|+.||......+ .+....... ..
T Consensus 178 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
T 4aaa_A 178 GE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQELFNK 254 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHH
T ss_pred cc--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhhhHhhh
Confidence 22 22445789999999999775 78999999999999999999999997643211 111111000 00
Q ss_pred c-ccccccCcccccCCCchH---HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1085 L-KISDVFDPELMKEDPNIE---IELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1085 ~-~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
. .......+......+... .....+.+++.+||+.||++|||++|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 255 NPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 000111111111111100 011245679999999999999999999876
No 247
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.7e-36 Score=341.47 Aligned_cols=252 Identities=27% Similarity=0.360 Sum_probs=196.9
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC--------cCHHHHHHHHHHHHhcCCCCcccceeEEeeCC
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG--------QGDREFTAEMETIGKIKHRNLVPLLGYCKVGE 929 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 929 (1176)
.++|.+.+.||+|+||.||+|++. +++.||||.+..... .....+.+|++++++++||||+++++++..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457999999999999999999986 578999998854221 12234789999999999999999999987655
Q ss_pred eeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCc---EEEEe
Q 046275 930 ERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFE---ARVSD 1006 (1176)
Q Consensus 930 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~D 1006 (1176)
.|+||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 899999999999999997654 689999999999999999999999 9999999999999987654 99999
Q ss_pred eccccccccccccccccccccCCcccCccccC---CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhh
Q 046275 1007 FGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQ---SFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHA 1083 (1176)
Q Consensus 1007 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~ 1083 (1176)
||+++...... ......||+.|+|||++. ...++.++|||||||++|+|++|+.||....... .+.....
T Consensus 161 fg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~--- 233 (322)
T 2ycf_A 161 FGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQIT--- 233 (322)
T ss_dssp CTTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHH---
T ss_pred Cccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHH---
Confidence 99998664322 123457899999999973 5678899999999999999999999997654222 2222221
Q ss_pred ccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1084 KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1084 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.... ...+..+...+ ..+.+++.+||+.||++|||+.+++++
T Consensus 234 ~~~~--~~~~~~~~~~~------~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 234 SGKY--NFIPEVWAEVS------EKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HTCC--CCCHHHHTTSC------HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hCcc--ccCchhhhhcC------HHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 1111 11122222222 245679999999999999999999853
No 248
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.4e-36 Score=344.05 Aligned_cols=265 Identities=26% Similarity=0.377 Sum_probs=186.4
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC-CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS-GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
..++|.+.+.||+|+||.||+|++. +++.||+|++.... ....+++.+|+.++++++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 4568999999999999999999865 68999999875432 233456889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccc----cCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccc
Q 046275 936 EYMRYGSLEDVLHNQKK----VGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1011 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 1011 (1176)
||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999975311 123589999999999999999999999 99999999999999999999999999987
Q ss_pred ccccccc---cccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccc
Q 046275 1012 LMSAMDT---HLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKI 1087 (1176)
Q Consensus 1012 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 1087 (1176)
....... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||....... .............
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~ 247 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK--VLMLTLQNDPPSL 247 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG--HHHHHHTSSCCCT
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh--HHHHHhccCCCcc
Confidence 6543221 111234579999999999865 568999999999999999999999997643211 1111110000001
Q ss_pred cc-ccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1088 SD-VFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1088 ~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.. ..++......+ ..+.+++.+||+.||++|||+.+++++
T Consensus 248 ~~~~~~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 248 ETGVQDKEMLKKYG------KSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TC-----CCCCCCC------HHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccccchhhhhhh------HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00 11111212222 135569999999999999999999875
No 249
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.8e-36 Score=354.14 Aligned_cols=264 Identities=27% Similarity=0.346 Sum_probs=196.4
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeC------CeeE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVG------EERL 932 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~ 932 (1176)
.+|++.+.||+|+||.||+|++. +|+.||||++.... +...+|++++++++|||||++++++... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 35888999999999999999986 59999999986432 2234799999999999999999988532 2357
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCC-CcEEEEeecccc
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDEN-FEARVSDFGMAR 1011 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGla~ 1011 (1176)
+||||+++ ++.+.+.........+++..++.++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999986 77777765433345799999999999999999999999 99999999999999965 568999999998
Q ss_pred ccccccccccccccccCCcccCccccCCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhc------
Q 046275 1012 LMSAMDTHLSVSTLAGTPGYVPPEYYQSF-RCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAK------ 1084 (1176)
Q Consensus 1012 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~------ 1084 (1176)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+.. ..+....+....
T Consensus 206 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp ECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHH
T ss_pred hcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 6643322 2345789999999998764 7899999999999999999999999764311 112222111100
Q ss_pred ----cccccccCcccccC------CCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHHHh
Q 046275 1085 ----LKISDVFDPELMKE------DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM--FKEIQ 1138 (1176)
Q Consensus 1085 ----~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~--L~~i~ 1138 (1176)
....+...+.+... .+.. -..+.+++.+||+.||++|||+.|+++| +++++
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRT---PPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTS---CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCC---CHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 00001101111000 0000 1246679999999999999999999986 44443
No 250
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1e-35 Score=336.18 Aligned_cols=265 Identities=23% Similarity=0.321 Sum_probs=200.1
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC--CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS--GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
++|++.+.||+|+||.||+|+++ +|+.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57889999999999999999987 68999999885432 2234678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAM 1016 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 1016 (1176)
|++ |+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~-~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 997 599999986542 2588999999999999999999999 9999999999999999999999999999865432
Q ss_pred cccccccccccCCcccCccccCCCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccc---cc----
Q 046275 1017 DTHLSVSTLAGTPGYVPPEYYQSFR-CSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLK---IS---- 1088 (1176)
Q Consensus 1017 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~---- 1088 (1176)
.. ......||+.|+|||++.+.. ++.++||||||+++|+|++|+.||...+..+ ............. ..
T Consensus 157 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 233 (299)
T 2r3i_A 157 VR--TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTS 233 (299)
T ss_dssp SB--CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGG
T ss_pred cc--ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCchhhhhHhhc
Confidence 21 123456899999999998765 7899999999999999999999997543111 1111111111000 00
Q ss_pred -cccCcccccCCCc-hHH----HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1089 -DVFDPELMKEDPN-IEI----ELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1089 -~~~~~~~~~~~~~-~~~----~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
..+.+........ ... --..+.+++.+||+.||++|||+.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 234 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp STTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0001111000000 000 01245679999999999999999999985
No 251
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.1e-35 Score=333.48 Aligned_cols=253 Identities=23% Similarity=0.334 Sum_probs=202.9
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC---------cCHHHHHHHHHHHHhcC-CCCcccceeEEe
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG---------QGDREFTAEMETIGKIK-HRNLVPLLGYCK 926 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 926 (1176)
..++|.+.+.||+|+||.||+|+++ +|+.||+|.+..... ...+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3468999999999999999999986 588999999864321 11345788999999995 999999999999
Q ss_pred eCCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEe
Q 046275 927 VGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSD 1006 (1176)
Q Consensus 927 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 1006 (1176)
.....++||||+++++|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV----TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEec
Confidence 9999999999999999999998654 689999999999999999999999 999999999999999999999999
Q ss_pred eccccccccccccccccccccCCcccCccccC------CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHH
Q 046275 1007 FGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQ------SFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVK 1080 (1176)
Q Consensus 1007 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~ 1080 (1176)
||++........ .....||+.|+|||++. ...++.++||||||+++|+|++|+.||.... ......
T Consensus 168 fg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~ 239 (298)
T 1phk_A 168 FGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK-----QMLMLR 239 (298)
T ss_dssp CTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHH
T ss_pred ccchhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc-----HHHHHH
Confidence 999986643322 24557899999999984 4568899999999999999999999986532 112222
Q ss_pred HhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1081 QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1081 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
........ .........+ ..+.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~~~~~--~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 240 MIMSGNYQ--FGSPEWDDYS------DTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHHHTCCC--CCTTTGGGSC------HHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHhcCCcc--cCcccccccC------HHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 22222111 1111111111 235679999999999999999999874
No 252
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.4e-36 Score=350.96 Aligned_cols=253 Identities=10% Similarity=0.037 Sum_probs=180.2
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC---cCHHHHHHHHHHHHhc--CCCCcccce-------eEEe
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG---QGDREFTAEMETIGKI--KHRNLVPLL-------GYCK 926 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~~ 926 (1176)
.+|.+.+.||+|+||.||+|++. +|+.||+|++..... ...+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 35888999999999999999986 689999999976433 2234577785555444 699988755 4443
Q ss_pred eC-----------------CeeEEEEeeccCCCHHHHHhhccccCcccCHHHH------HHHHHHHHHHHHHHHhcCCCC
Q 046275 927 VG-----------------EERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAAR------RKIAIGSARGLAFLHHNCIPH 983 (1176)
Q Consensus 927 ~~-----------------~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~~L~~LH~~~~~~ 983 (1176)
.. ...|+||||++ |+|.+++...+. .+++..+ ..++.|++.||+|||++ +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 32 33799999998 799999987542 3455566 78889999999999999 9
Q ss_pred eeeCCCCCCCEEECCCCcEEEEeeccccccccccccccccccccCCcccCccccCC--CCCCchhhhHHHHHHHHHHHcC
Q 046275 984 IIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQS--FRCSTKGDVYSYGVVLLELLTG 1061 (1176)
Q Consensus 984 ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg 1061 (1176)
|+||||||+||+++.++.+||+|||+|+...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 9999999999999999999999999998654321 13456799999999987 7899999999999999999999
Q ss_pred CCCCCCCCCCCccHHHHHHHhhccccccccCcccc-cCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1062 KRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELM-KEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1062 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
+.||......... ................ ...+... ..+.+++.+||+.||++|||+.+++++
T Consensus 290 ~~Pf~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 290 FLPFGLVTPGIKG------SWKRPSLRVPGTDSLAFGSCTPLP---DFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp SCSTTBCCTTCTT------CCCBCCTTSCCCCSCCCTTSSCCC---HHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCCCCCcCccccc------chhhhhhhhccccccchhhccCCC---HHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 9999765322110 0000000000000000 0001111 245569999999999999999999864
No 253
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2e-35 Score=343.50 Aligned_cols=263 Identities=24% Similarity=0.320 Sum_probs=200.2
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc-CHHHHHHHHHHHHhcCCCCcccceeEEeeC-----Ce
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ-GDREFTAEMETIGKIKHRNLVPLLGYCKVG-----EE 930 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 930 (1176)
..++|++.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3468999999999999999999986 6888999998643322 235688999999999999999999998654 36
Q ss_pred eEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccc
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1010 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 1010 (1176)
.|+||||++ |+|.+++... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEcccC-cCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 899999997 4999999754 589999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccc-cccccccCCcccCccccC-CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccc--
Q 046275 1011 RLMSAMDTHL-SVSTLAGTPGYVPPEYYQ-SFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLK-- 1086 (1176)
Q Consensus 1011 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~-- 1086 (1176)
+......... ......||+.|+|||++. ...++.++||||+||++|+|++|+.||...+..+ .+...........
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQE 254 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHH
Confidence 8765433221 124568999999999865 4458999999999999999999999997654221 1111111000000
Q ss_pred ----------------cccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1087 ----------------ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1087 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
....-........+.. -..+.+++.+||+.||++|||++|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNA---DSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCC---CHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000000011 1245679999999999999999999986
No 254
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=9.8e-36 Score=344.18 Aligned_cols=258 Identities=22% Similarity=0.312 Sum_probs=203.2
Q ss_pred hcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCH-----------------HHHHHHHHHHHhcCCCCcccc
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGD-----------------REFTAEMETIGKIKHRNLVPL 921 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----------------~~~~~E~~~l~~l~h~niv~l 921 (1176)
.++|++.+.||+|+||.||+|++ +|+.||+|++........ +.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35799999999999999999999 899999999864322111 779999999999999999999
Q ss_pred eeEEeeCCeeEEEEeeccCCCHHHH------HhhccccCcccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeeCCCCCCCE
Q 046275 922 LGYCKVGEERLLVYEYMRYGSLEDV------LHNQKKVGIKLNWAARRKIAIGSARGLAFLHH-NCIPHIIHRDMKSSNV 994 (1176)
Q Consensus 922 ~~~~~~~~~~~lV~E~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NI 994 (1176)
++++.+.+..++||||+++|+|.++ +.... ...+++..++.++.|++.||+|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY--TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS--CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc--ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999998 54321 2368999999999999999999999 8 999999999999
Q ss_pred EECCCCcEEEEeeccccccccccccccccccccCCcccCccccCCC-CCCc-hhhhHHHHHHHHHHHcCCCCCCCCCCCC
Q 046275 995 LLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSF-RCST-KGDVYSYGVVLLELLTGKRPTDSADFGD 1072 (1176)
Q Consensus 995 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwSlGvil~elltg~~P~~~~~~~~ 1072 (1176)
+++.++.+||+|||.+...... ......||+.|+|||++.+. .++. ++||||+|+++|||++|+.||......
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~- 258 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL- 258 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-
T ss_pred EEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-
Confidence 9999999999999999865432 22456799999999999877 5666 999999999999999999999764321
Q ss_pred ccHHHHHHHhhccccccccCc-----ccccC-----CCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1073 NNLVGWVKQHAKLKISDVFDP-----ELMKE-----DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1073 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
................+. ..... .+.. -..+.+++.+||+.||++|||+.|++++
T Consensus 259 ---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 259 ---VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFL---SNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp ---HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CC---CHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ---HHHHHHHhccCcCCccchhhhhccccccccccchhhc---CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 122222222211100000 00000 0011 1245679999999999999999999885
No 255
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5.9e-35 Score=327.82 Aligned_cols=252 Identities=24% Similarity=0.366 Sum_probs=203.5
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccC--CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEE
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHIS--GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++......++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3467999999999999999999987 68999999986532 33456789999999999999999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCC---CcEEEEeecccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDEN---FEARVSDFGMAR 1011 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfGla~ 1011 (1176)
|||+++++|.+++...+ .+++.+++.++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||++.
T Consensus 100 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 99999999999987654 689999999999999999999999 99999999999999754 469999999998
Q ss_pred ccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccccccc
Q 046275 1012 LMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVF 1091 (1176)
Q Consensus 1012 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1091 (1176)
....... .....||+.|+|||++.+ .++.++||||+|+++|+|++|+.||.... .............. .
T Consensus 173 ~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~--~ 241 (287)
T 2wei_A 173 CFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN-----EYDILKRVETGKYA--F 241 (287)
T ss_dssp TBCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC--C
T ss_pred eecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCCCC--C
Confidence 6543222 233468999999999876 48999999999999999999999986543 22222222222211 1
Q ss_pred CcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1092 DPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1092 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
+.......+ ..+.+++.+||+.||++|||+.+++++
T Consensus 242 ~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 242 DLPQWRTIS------DDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp CSGGGTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred CchhhhhcC------HHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 111111111 135569999999999999999999985
No 256
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-35 Score=354.65 Aligned_cols=327 Identities=22% Similarity=0.167 Sum_probs=261.8
Q ss_pred ceeeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcC
Q 046275 221 QFLDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLC 300 (1176)
Q Consensus 221 ~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l 300 (1176)
+.+++++++++.+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..|..+. .+
T Consensus 14 ~~v~c~~~~l~~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~------------~l 79 (477)
T 2id5_A 14 RAVLCHRKRFVAVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFN------------NL 79 (477)
T ss_dssp TEEECCSCCCSSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTT------------TC
T ss_pred CEEEeCCCCcCcCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhh------------CC
Confidence 456777777776666543 5677778888877777777777777888888887777755454433 34
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEE
Q 046275 301 SSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLD 380 (1176)
Q Consensus 301 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 380 (1176)
++|++|+|++|++++..+..|.++++|++|+|++|+++ .++...|..+++|++|+|++|.+++..+..|.++++|+.|+
T Consensus 80 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 158 (477)
T 2id5_A 80 FNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLT 158 (477)
T ss_dssp TTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEE
T ss_pred ccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccc-cCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEE
Confidence 67888888888877655566778888888888888887 44445567788888888888888877777888888888888
Q ss_pred ccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccc
Q 046275 381 LSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQL 460 (1176)
Q Consensus 381 Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 460 (1176)
|++|++++..+..+ ..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|..+....+|+.|+|++|++
T Consensus 159 l~~n~l~~~~~~~l--~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l 236 (477)
T 2id5_A 159 LEKCNLTSIPTEAL--SHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNL 236 (477)
T ss_dssp EESCCCSSCCHHHH--TTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCC
T ss_pred CCCCcCcccChhHh--cccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcc
Confidence 88888875443334 3467788888888888877777888899999999999888878888777777999999999999
Q ss_pred cCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCC
Q 046275 461 HGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPEL 540 (1176)
Q Consensus 461 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 540 (1176)
++..+..+..+++|++|+|++|++++..+..|.++++|+.|+|++|++++..|..|..+++|++|+|++|++++..+..|
T Consensus 237 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 316 (477)
T 2id5_A 237 TAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVF 316 (477)
T ss_dssp CSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGB
T ss_pred cccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHc
Confidence 85555678899999999999999998888889999999999999999998889999999999999999999997777788
Q ss_pred CCCCCCCEEEccCCCCcccCChhH
Q 046275 541 GDCRSLIWLDLNTNLFNGSIPPAL 564 (1176)
Q Consensus 541 ~~l~~L~~L~L~~N~l~g~ip~~~ 564 (1176)
..+++|+.|+|++|++.+.++..+
T Consensus 317 ~~l~~L~~L~l~~N~l~c~c~~~~ 340 (477)
T 2id5_A 317 HSVGNLETLILDSNPLACDCRLLW 340 (477)
T ss_dssp SCGGGCCEEECCSSCEECSGGGHH
T ss_pred CCCcccCEEEccCCCccCccchHh
Confidence 999999999999999998765443
No 257
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.4e-35 Score=347.99 Aligned_cols=203 Identities=24% Similarity=0.384 Sum_probs=157.0
Q ss_pred CCCC-CceEeEeCceEEEEEEEC---CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEee--CCeeEEE
Q 046275 861 GFHN-DSLIGSGGFGDVYKAKLK---DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKV--GEERLLV 934 (1176)
Q Consensus 861 ~y~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV 934 (1176)
.|.+ .++||+|+||+||+|+++ +++.||+|++... .....+.+|+.++++++||||+++++++.. +...|+|
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 3555 568999999999999976 5789999988542 234568899999999999999999999954 6789999
Q ss_pred EeeccCCCHHHHHhhcccc-----CcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE----CCCCcEEEE
Q 046275 935 YEYMRYGSLEDVLHNQKKV-----GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL----DENFEARVS 1005 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~ 1005 (1176)
|||+.+ +|.+++...... ...+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+
T Consensus 99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 999975 888888644321 22489999999999999999999999 99999999999999 678899999
Q ss_pred eeccccccccccc-cccccccccCCcccCccccCCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCC
Q 046275 1006 DFGMARLMSAMDT-HLSVSTLAGTPGYVPPEYYQSF-RCSTKGDVYSYGVVLLELLTGKRPTDSAD 1069 (1176)
Q Consensus 1006 DfGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~P~~~~~ 1069 (1176)
|||+|+....... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||....
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 9999987653221 1223456799999999999874 58999999999999999999999997654
No 258
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3e-35 Score=341.86 Aligned_cols=276 Identities=23% Similarity=0.287 Sum_probs=193.1
Q ss_pred HHHHHhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCe--
Q 046275 854 DLLEATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEE-- 930 (1176)
Q Consensus 854 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-- 930 (1176)
......++|++.+.||+|+||+||+|++. +|+.||||++.... .......+|++.++.++||||+++++++.....
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 34566789999999999999999999986 68999999886432 333456778888899999999999999865433
Q ss_pred -----eEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHH--hcCCCCeeeCCCCCCCEEECC-CCcE
Q 046275 931 -----RLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLH--HNCIPHIIHRDMKSSNVLLDE-NFEA 1002 (1176)
Q Consensus 931 -----~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--~~~~~~ivH~Dlkp~NIll~~-~~~~ 1002 (1176)
.++||||+++ ++.+.+.........+++..+..++.|++.|+.||| +. +|+||||||+||+++. ++.+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcE
Confidence 7899999986 666655543333447899999999999999999999 77 9999999999999996 8999
Q ss_pred EEEeeccccccccccccccccccccCCcccCccccCCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHH
Q 046275 1003 RVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSF-RCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQ 1081 (1176)
Q Consensus 1003 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~ 1081 (1176)
||+|||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+.. ..+......
T Consensus 172 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~ 247 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRV 247 (360)
T ss_dssp EECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHH
T ss_pred EEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHH
Confidence 9999999987654332 2345789999999998654 4899999999999999999999999764311 111111111
Q ss_pred hhcc--cc-----ccccCccccc--CCCch-------HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHHHh
Q 046275 1082 HAKL--KI-----SDVFDPELMK--EDPNI-------EIELLQHLHVASACLDDRPWRRPTMIQVMAM--FKEIQ 1138 (1176)
Q Consensus 1082 ~~~~--~~-----~~~~~~~~~~--~~~~~-------~~~~~~~~~li~~cl~~dp~~RPt~~evl~~--L~~i~ 1138 (1176)
.... .. ....+..... ..+.. ......+.+++.+||+.||++|||+.|+++| ++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 0000 00 0000000000 00000 0012356779999999999999999999987 55554
No 259
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=7.8e-36 Score=346.19 Aligned_cols=260 Identities=26% Similarity=0.325 Sum_probs=180.7
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhcCCCCcccceeEEeeC------C
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG--QGDREFTAEMETIGKIKHRNLVPLLGYCKVG------E 929 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 929 (1176)
.++|++.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 367999999999999999999876 688999999864322 2345688999999999999999999998654 5
Q ss_pred eeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecc
Q 046275 930 ERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGM 1009 (1176)
Q Consensus 930 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 1009 (1176)
..|+|+||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC-----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 679999999 67999988753 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcc--c
Q 046275 1010 ARLMSAMDTHLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKL--K 1086 (1176)
Q Consensus 1010 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~ 1086 (1176)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+..+ .+.......... .
T Consensus 179 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~ 252 (367)
T 2fst_X 179 ARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAE 252 (367)
T ss_dssp -----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHH
T ss_pred ccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHH
Confidence 9865422 234578999999999877 678999999999999999999999997643110 011111110000 0
Q ss_pred cccccCc--------ccccCCCchHH-----HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1087 ISDVFDP--------ELMKEDPNIEI-----ELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1087 ~~~~~~~--------~~~~~~~~~~~-----~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
....+.. .+......... .-..+.+++.+||+.||++|||++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000000 00000000000 01245679999999999999999999987
No 260
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=6.5e-35 Score=334.02 Aligned_cols=263 Identities=23% Similarity=0.323 Sum_probs=199.4
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC--CCCEEEEEEeeccCC--cCHHHHHHHHHHHHhc---CCCCcccceeEEe----
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK--DGSTVAIKKLIHISG--QGDREFTAEMETIGKI---KHRNLVPLLGYCK---- 926 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 926 (1176)
+.++|++.+.||+|+||.||+|++. +|+.||+|++..... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4568999999999999999999984 578899998864322 2234567788877776 8999999999987
Q ss_pred -eCCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEE
Q 046275 927 -VGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVS 1005 (1176)
Q Consensus 927 -~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 1005 (1176)
.....++||||++ |+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 4567899999998 599999986542 2589999999999999999999999 99999999999999999999999
Q ss_pred eeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhc-
Q 046275 1006 DFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAK- 1084 (1176)
Q Consensus 1006 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~- 1084 (1176)
|||+++...... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||....... .+.........
T Consensus 163 Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~ 238 (326)
T 1blx_A 163 DFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLP 238 (326)
T ss_dssp SCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred cCcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCC
Confidence 999998654322 2345678999999999999899999999999999999999999997543110 01111111100
Q ss_pred --ccccccc-----------CcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1085 --LKISDVF-----------DPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1085 --~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
..+.... ........+... ..+.+++.+||+.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDID---ELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCC---HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CcccCccccccchhhhcccCcchhhhccccCC---HHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000 000000011111 234569999999999999999999875
No 261
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=5.4e-35 Score=346.56 Aligned_cols=199 Identities=27% Similarity=0.337 Sum_probs=172.6
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhc------CCCCcccceeEEeeCCee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKI------KHRNLVPLLGYCKVGEER 931 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 931 (1176)
..+|++.+.||+|+||+||+|++. +++.||||++... ....+++.+|+.+++.+ +|+||+++++++......
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457999999999999999999887 5889999988532 22345677888888887 577999999999999999
Q ss_pred EEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCc--EEEEeecc
Q 046275 932 LLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFE--ARVSDFGM 1009 (1176)
Q Consensus 932 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DfGl 1009 (1176)
++||||+. ++|.+++..... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKF--QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEeccC-CCHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 99999996 699999987542 2589999999999999999999999 9999999999999999887 99999999
Q ss_pred ccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Q 046275 1010 ARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSAD 1069 (1176)
Q Consensus 1010 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~ 1069 (1176)
|+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 249 a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 249 SCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp CEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 9754321 234579999999999999999999999999999999999999997653
No 262
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=7.8e-35 Score=329.41 Aligned_cols=253 Identities=23% Similarity=0.396 Sum_probs=192.0
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEee----------
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKV---------- 927 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 927 (1176)
.++|++.+.||+|+||.||+|++. +|+.||+|++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 457899999999999999999986 6899999988542 2334678899999999999999999998865
Q ss_pred ---CCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEE
Q 046275 928 ---GEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARV 1004 (1176)
Q Consensus 928 ---~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 1004 (1176)
....|+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl 157 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKI 157 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC---GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEE
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc---cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEE
Confidence 356799999999999999998643 3578899999999999999999999 9999999999999999999999
Q ss_pred Eeeccccccccccc------------cccccccccCCcccCccccCCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCC
Q 046275 1005 SDFGMARLMSAMDT------------HLSVSTLAGTPGYVPPEYYQSF-RCSTKGDVYSYGVVLLELLTGKRPTDSADFG 1071 (1176)
Q Consensus 1005 ~DfGla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~P~~~~~~~ 1071 (1176)
+|||++........ ........||+.|+|||++.+. .++.++||||+||++|||++ ||...
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~--- 231 (303)
T 1zy4_A 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG--- 231 (303)
T ss_dssp CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH---
T ss_pred eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc---
Confidence 99999976542210 1122345789999999999764 68999999999999999998 54321
Q ss_pred CccHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1072 DNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.............. ..+++......+ ..+.+++.+||+.||++|||+++++++
T Consensus 232 -~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 232 -MERVNILKKLRSVS--IEFPPDFDDNKM------KVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp -HHHHHHHHHHHSTT--CCCCTTCCTTTS------HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -hhHHHHHHhccccc--cccCccccccch------HHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 11112222222111 112222222111 234569999999999999999999975
No 263
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.2e-35 Score=366.94 Aligned_cols=258 Identities=24% Similarity=0.352 Sum_probs=202.3
Q ss_pred HhcCCCCCceEeEeCceEEEEEEECC----CCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeE
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLKD----GSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERL 932 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 932 (1176)
..++|++.+.||+|+||.||+|++.. +..||+|++..... ...+.+.+|+.++++++||||+++++++. ++..|
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 34678899999999999999998753 45789998754322 22356889999999999999999999985 45689
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccc
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1012 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 1012 (1176)
+||||+++|+|.+++...+ ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 467 lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp EEEECCTTCBHHHHHHHTT---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred EEEEcCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCee
Confidence 9999999999999997653 3689999999999999999999999 999999999999999999999999999987
Q ss_pred cccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhcccccccc
Q 046275 1013 MSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKISDVF 1091 (1176)
Q Consensus 1013 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1091 (1176)
...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||..... .............
T Consensus 541 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~-----~~~~~~i~~~~~~--- 611 (656)
T 2j0j_A 541 MEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----NDVIGRIENGERL--- 611 (656)
T ss_dssp CCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHHTCCC---
T ss_pred cCCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHcCCCC---
Confidence 643322 12234567889999999988899999999999999999997 9999875431 1222222221111
Q ss_pred CcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhh
Q 046275 1092 DPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 1139 (1176)
Q Consensus 1092 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~ 1139 (1176)
......+ ..+.+++.+||+.||++|||+.++++.|+++..
T Consensus 612 --~~~~~~~------~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 612 --PMPPNCP------PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp --CCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCCcccc------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 1111112 135569999999999999999999999998864
No 264
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5.1e-35 Score=335.85 Aligned_cols=253 Identities=22% Similarity=0.261 Sum_probs=171.9
Q ss_pred hcCCCCC-ceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEee----CCeeE
Q 046275 859 TNGFHND-SLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKV----GEERL 932 (1176)
Q Consensus 859 ~~~y~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 932 (1176)
.++|.+. ++||+|+||+||+|+++ +|+.||+|++... .....+....++.++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 4578885 46999999999999987 6899999998532 2222223334566799999999999876 44589
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC---CCcEEEEeecc
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE---NFEARVSDFGM 1009 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfGl 1009 (1176)
+||||+++|+|.+++..... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 103 lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGD--QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-C--CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEeccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 99999999999999986542 3689999999999999999999999 9999999999999976 45599999999
Q ss_pred ccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccccc
Q 046275 1010 ARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISD 1089 (1176)
Q Consensus 1010 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 1089 (1176)
++...... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||......... ............
T Consensus 178 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~-- 250 (336)
T 3fhr_A 178 AKETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS-PGMKRRIRLGQY-- 250 (336)
T ss_dssp CEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------
T ss_pred ceeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh-hhHHHhhhcccc--
Confidence 97654322 23457899999999998889999999999999999999999999754322110 000011100000
Q ss_pred ccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1090 VFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1090 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.++...+...+ ..+.+++.+||+.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~------~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 251 GFPNPEWSEVS------EDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp CCCTTTSTTCC------HHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ccCchhhccCC------HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01111111111 135569999999999999999999996
No 265
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=339.16 Aligned_cols=259 Identities=22% Similarity=0.352 Sum_probs=198.6
Q ss_pred hcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccC--CcCHHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHIS--GQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
.++|++.+.||+|+||.||+|+++. .||+|++.... ....+.+.+|+.++++++||||+++++++......++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4678999999999999999999863 48999885432 2233557789999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAM 1016 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 1016 (1176)
|+++++|.+++...+ ..+++..++.++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++.....
T Consensus 110 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp CCCSEEHHHHTTSSC---CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred cccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 999999999997653 3589999999999999999999999 999999999999998 679999999998755322
Q ss_pred cc---cccccccccCCcccCccccCC---------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhc
Q 046275 1017 DT---HLSVSTLAGTPGYVPPEYYQS---------FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAK 1084 (1176)
Q Consensus 1017 ~~---~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~ 1084 (1176)
.. ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||.... ..........
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~ 257 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP-----AEAIIWQMGT 257 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC-----HHHHHHHHHT
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHhcc
Confidence 11 112234568999999999864 457889999999999999999999996543 1122222222
Q ss_pred cccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1085 LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1085 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
......... ..+. .+.+++.+||+.||++|||+.++++.|+++....
T Consensus 258 ~~~~~~~~~----~~~~------~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 258 GMKPNLSQI----GMGK------EISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp TCCCCCCCS----SCCT------THHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCCCCCcC----CCCH------HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 211111111 1111 2456999999999999999999999999987653
No 266
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=9.9e-35 Score=339.88 Aligned_cols=202 Identities=27% Similarity=0.324 Sum_probs=170.9
Q ss_pred HhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcC-CC-----CcccceeEEeeCCe
Q 046275 858 ATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIK-HR-----NLVPLLGYCKVGEE 930 (1176)
Q Consensus 858 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~ 930 (1176)
..++|++.+.||+|+||+||+|++. +++.||||++... ....+++.+|+.+++.++ |+ +|+++++++.....
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 3568999999999999999999987 5788999988532 223456778999988885 55 49999999999999
Q ss_pred eEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEEC--CCCcEEEEeec
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLD--ENFEARVSDFG 1008 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~DfG 1008 (1176)
.++||||++ |+|.+++..... ..+++..++.++.|++.||.|||+. ..+|+||||||+||+++ .++.+||+|||
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNF--RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred eEEEEecCC-CCHHHHHhhcCc--CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 999999996 599999986542 2589999999999999999999952 12899999999999994 57889999999
Q ss_pred cccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Q 046275 1009 MARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSAD 1069 (1176)
Q Consensus 1009 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~ 1069 (1176)
+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 207 ~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 207 SSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp TCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred Cceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99866432 234678999999999999999999999999999999999999997643
No 267
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=8.3e-35 Score=338.94 Aligned_cols=256 Identities=24% Similarity=0.351 Sum_probs=193.7
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc--CHHHHHHHHHHHHhcCCCCcccceeEEeeCCee----
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ--GDREFTAEMETIGKIKHRNLVPLLGYCKVGEER---- 931 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 931 (1176)
.++|.+.+.||+|+||.||+|++. +|+.||+|++...... ..+.+.+|+.+++.++||||+++++++......
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 357899999999999999999986 6889999998653222 245688999999999999999999999877654
Q ss_pred --EEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecc
Q 046275 932 --LLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGM 1009 (1176)
Q Consensus 932 --~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 1009 (1176)
++||||+. ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999997 588887742 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcc---
Q 046275 1010 ARLMSAMDTHLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKL--- 1085 (1176)
Q Consensus 1010 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~--- 1085 (1176)
++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...+..+ .+..........
T Consensus 191 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~ 264 (371)
T 4exu_A 191 ARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTE 264 (371)
T ss_dssp C-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHH
T ss_pred ccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHH
Confidence 9865432 234578999999999877 688999999999999999999999997643111 011111100000
Q ss_pred ---------------ccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1086 ---------------KISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1086 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
..............+.. -..+.+++.+||+.||++|||++|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRA---SPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTS---CHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhhhhhhhhhhhccCCCcchhHHHhcccc---ChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00000000000000000 1245679999999999999999999987
No 268
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.1e-34 Score=336.08 Aligned_cols=262 Identities=25% Similarity=0.348 Sum_probs=196.5
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEeeC-----Cee
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVG-----EER 931 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 931 (1176)
.++|.+.+.||+|+||.||+|++. +|+.||||++..... .....+.+|+.++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467999999999999999999987 688999999854322 2234678999999999999999999987654 678
Q ss_pred EEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccc
Q 046275 932 LLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1011 (1176)
Q Consensus 932 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 1011 (1176)
++||||+. |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeccC-ccHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 99999997 5999998753 589999999999999999999999 99999999999999999999999999998
Q ss_pred ccccccccc--------cccccccCCcccCccccC-CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHh
Q 046275 1012 LMSAMDTHL--------SVSTLAGTPGYVPPEYYQ-SFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQH 1082 (1176)
Q Consensus 1012 ~~~~~~~~~--------~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~ 1082 (1176)
......... ......||+.|+|||++. +..++.++|||||||++|+|++|+.||...+... .+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~ 239 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGII 239 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHh
Confidence 764322111 123357899999999875 4678999999999999999999999997643111 011111100
Q ss_pred hccc-------------------cccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1083 AKLK-------------------ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1083 ~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.... .............+.. -..+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRV---NPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTS---CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccC---CHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 0000000000000011 1235679999999999999999999986
No 269
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=335.50 Aligned_cols=245 Identities=24% Similarity=0.383 Sum_probs=190.1
Q ss_pred HHHHhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc------CHHHHHHHHHHHHhc----CCCCccccee
Q 046275 855 LLEATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ------GDREFTAEMETIGKI----KHRNLVPLLG 923 (1176)
Q Consensus 855 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~l~~ 923 (1176)
.....++|++.+.||+|+||.||+|++. +++.||+|++...... ....+.+|+.+++++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3445678999999999999999999875 6889999998643321 223356799999998 8999999999
Q ss_pred EEeeCCeeEEEEee-ccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEEC-CCCc
Q 046275 924 YCKVGEERLLVYEY-MRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLD-ENFE 1001 (1176)
Q Consensus 924 ~~~~~~~~~lV~E~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~ 1001 (1176)
++...+..++|||| +.+++|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||+++ .++.
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCe
Confidence 99999999999999 78999999998754 689999999999999999999999 999999999999999 8899
Q ss_pred EEEEeeccccccccccccccccccccCCcccCccccCCCCCC-chhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHH
Q 046275 1002 ARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCS-TKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVK 1080 (1176)
Q Consensus 1002 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~ 1080 (1176)
+||+|||+++...... .....||+.|+|||++.+..+. .++||||+|+++|||++|+.||.... ....
T Consensus 179 ~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~ 247 (312)
T 2iwi_A 179 AKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EILE 247 (312)
T ss_dssp EEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHH
T ss_pred EEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HHhh
Confidence 9999999998765422 2445789999999998766654 58999999999999999999986321 1111
Q ss_pred HhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1081 QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1081 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.... +. ...+ ..+.+++.+||+.||++|||++|++++
T Consensus 248 --~~~~----~~----~~~~------~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 248 --AELH----FP----AHVS------PDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp --TCCC----CC----TTSC------HHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --hccC----Cc----ccCC------HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111 11 1111 135569999999999999999999986
No 270
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.7e-35 Score=335.01 Aligned_cols=262 Identities=24% Similarity=0.330 Sum_probs=191.6
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCcccceeEEe-----------
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCK----------- 926 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----------- 926 (1176)
.++|.+.+.||+|+||.||+|++. +|+.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 357899999999999999999987 48999999987655555667899999999999999999999873
Q ss_pred ---eCCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEEC-CCCcE
Q 046275 927 ---VGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLD-ENFEA 1002 (1176)
Q Consensus 927 ---~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~ 1002 (1176)
+....++||||++ |+|.+++... ++++..++.++.|++.||+|||+. +|+||||||+||+++ +++.+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG-----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC-----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeE
Confidence 3467899999997 5999999743 589999999999999999999999 999999999999997 56799
Q ss_pred EEEeeccccccccccc-cccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHH
Q 046275 1003 RVSDFGMARLMSAMDT-HLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVK 1080 (1176)
Q Consensus 1003 kl~DfGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~ 1080 (1176)
||+|||+++....... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||....... .+.....
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~ 239 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLILE 239 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 9999999986643211 112234567999999998755 678999999999999999999999997643110 0100000
Q ss_pred Hhhc------cccccccC----cc-------cccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1081 QHAK------LKISDVFD----PE-------LMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1081 ~~~~------~~~~~~~~----~~-------~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.... ......+. .. .....+.. -..+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGI---SREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTC---CHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchh---hHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0000 00000000 00 00000001 1245679999999999999999999986
No 271
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-34 Score=358.98 Aligned_cols=336 Identities=20% Similarity=0.196 Sum_probs=216.4
Q ss_pred CCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCcc
Q 046275 324 CSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLK 403 (1176)
Q Consensus 324 l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~ 403 (1176)
+++++.|++++|.+. .+|..+|..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..+ ..+++|+
T Consensus 50 l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~--~~l~~L~ 126 (597)
T 3oja_B 50 LNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVF--QNVPLLT 126 (597)
T ss_dssp GCCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTT--TTCTTCC
T ss_pred CCCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHH--cCCCCCC
Confidence 345555566655554 5555555556666666666666655555556666666666666666654444333 2345566
Q ss_pred EEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeeccccc
Q 046275 404 ELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNE 483 (1176)
Q Consensus 404 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 483 (1176)
+|+|++|.+++..+..|+++++|++|+|++|.+++..|..|+.+++|+.|+|++|.+++. .++.+++|+.|++++|.
T Consensus 127 ~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~ 203 (597)
T 3oja_B 127 VLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNL 203 (597)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSC
T ss_pred EEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCc
Confidence 666666666644444456666666666666666666666666666666666666666643 24455666677777776
Q ss_pred ccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChh
Q 046275 484 LTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPA 563 (1176)
Q Consensus 484 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~ 563 (1176)
+++ +....+|+.|++++|.++. +|..+ .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..
T Consensus 204 l~~-----l~~~~~L~~L~ls~n~l~~-~~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~ 273 (597)
T 3oja_B 204 LST-----LAIPIAVEELDASHNSINV-VRGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHP 273 (597)
T ss_dssp CSE-----EECCTTCSEEECCSSCCCE-EECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGG
T ss_pred ccc-----ccCCchhheeeccCCcccc-ccccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHH
Confidence 653 2234467777777777663 23222 2567777777777764 356667777777777777776544432
Q ss_pred HHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEc
Q 046275 564 LFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDI 643 (1176)
Q Consensus 564 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdL 643 (1176)
+ ..+.+|++|+|
T Consensus 274 ~--------------------------------------------------------------------~~l~~L~~L~L 285 (597)
T 3oja_B 274 F--------------------------------------------------------------------VKMQRLERLYI 285 (597)
T ss_dssp G--------------------------------------------------------------------TTCSSCCEEEC
T ss_pred h--------------------------------------------------------------------cCccCCCEEEC
Confidence 2 22345677777
Q ss_pred ccCcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCccccccccccccccccccCC
Q 046275 644 SYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLTGM 723 (1176)
Q Consensus 644 s~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~g~ 723 (1176)
++|++++ +|..++.+++|+.|+|++|+++ .+|..++.+++|++|+|++|+|++ +| +..+++|+.|+|++|++++.
T Consensus 286 s~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~-~~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 286 SNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp TTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCC-cC--hhhcCCCCEEEeeCCCCCCh
Confidence 7777775 5667777888888888888888 678888888888888888888874 44 66777888888888888876
Q ss_pred CCCCCCccccCCccccCCCCCCCCCC
Q 046275 724 IPVMGQFETFQPAKFLNNSGLCGLPL 749 (1176)
Q Consensus 724 ~p~~~~~~~~~~~~~~~n~~l~~~~~ 749 (1176)
.+. ..+..+....+.++...|+.+.
T Consensus 361 ~~~-~~~~~~~~~~~~~~~~~C~~~~ 385 (597)
T 3oja_B 361 SLR-ALFRNVARPAVDDADQHCKIDY 385 (597)
T ss_dssp HHH-HHTTTCCTTTBCCCCCCCCTTC
T ss_pred hHH-HHHHHHhhhccccccccCCcch
Confidence 432 3455666677888888998743
No 272
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=8.7e-35 Score=342.73 Aligned_cols=264 Identities=21% Similarity=0.229 Sum_probs=199.5
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcC--------CCCcccceeEEe---
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIK--------HRNLVPLLGYCK--- 926 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~--- 926 (1176)
.++|++.+.||+|+||+||+|++. +++.||||++... ....+.+.+|+.++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 367999999999999999999876 5788999988532 233456889999999985 788999999987
Q ss_pred -eCCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCC-----
Q 046275 927 -VGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENF----- 1000 (1176)
Q Consensus 927 -~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----- 1000 (1176)
.....++||||+ ++++.+++.... ...+++..++.++.||+.||+|||+++ +|+||||||+||+++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSN--YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhh
Confidence 456789999999 567777776543 236899999999999999999999964 799999999999999775
Q ss_pred --------------------------------------------cEEEEeeccccccccccccccccccccCCcccCccc
Q 046275 1001 --------------------------------------------EARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEY 1036 (1176)
Q Consensus 1001 --------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~ 1036 (1176)
.+||+|||+++..... .....||+.|+|||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHH
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChh
Confidence 7999999999865432 234578999999999
Q ss_pred cCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCcc--HHHHH---HHhhc--------cccc-cccCc-----ccc-
Q 046275 1037 YQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNN--LVGWV---KQHAK--------LKIS-DVFDP-----ELM- 1096 (1176)
Q Consensus 1037 ~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~--~~~~~---~~~~~--------~~~~-~~~~~-----~~~- 1096 (1176)
+.+..++.++|||||||++|||++|+.||...+..... ..... ..... .... +.+.. .+.
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 99989999999999999999999999999765432211 11110 10000 0000 00000 000
Q ss_pred -----------cCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1097 -----------KEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1097 -----------~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
............+.+++.+||+.||++|||++|+++|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0001112334567789999999999999999999875
No 273
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.7e-34 Score=332.27 Aligned_cols=260 Identities=22% Similarity=0.317 Sum_probs=200.2
Q ss_pred hcCCCCCceEeEeCceEEEEEEE-C-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCC------CcccceeEEeeCCe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKL-K-DGSTVAIKKLIHISGQGDREFTAEMETIGKIKHR------NLVPLLGYCKVGEE 930 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~~ 930 (1176)
.++|++.+.||+|+||+||+|.+ + +++.||+|++... ....+.+.+|+++++.++|+ +++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 35799999999999999999987 3 5788999988532 23345688899999998765 49999999999999
Q ss_pred eEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC------------
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE------------ 998 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~------------ 998 (1176)
.++||||+ +++|.+++...+. .++++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGF--LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----
T ss_pred EEEEEcCC-CCCHHHHHHhcCC--CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccc
Confidence 99999999 8899999986542 3688999999999999999999999 9999999999999987
Q ss_pred -------CCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCC
Q 046275 999 -------NFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFG 1071 (1176)
Q Consensus 999 -------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~ 1071 (1176)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+..
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred cccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 668999999999764332 23457899999999999999999999999999999999999999754321
Q ss_pred CccHHHHHHHhhcccccc----------ccC--------------------cccccCCCchHHHHHHHHHHHHHhccCCC
Q 046275 1072 DNNLVGWVKQHAKLKISD----------VFD--------------------PELMKEDPNIEIELLQHLHVASACLDDRP 1121 (1176)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~~----------~~~--------------------~~~~~~~~~~~~~~~~~~~li~~cl~~dp 1121 (1176)
........... ..+. .+. ................+.+++.+||+.||
T Consensus 241 --~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 317 (339)
T 1z57_A 241 --EHLAMMERILG-PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317 (339)
T ss_dssp --HHHHHHHHHHC-SCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred --HHHHHHHHHhC-CCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence 11111111000 0000 000 00000000011123456789999999999
Q ss_pred CCCCCHHHHHHH
Q 046275 1122 WRRPTMIQVMAM 1133 (1176)
Q Consensus 1122 ~~RPt~~evl~~ 1133 (1176)
++|||++|++++
T Consensus 318 ~~Rpt~~ell~h 329 (339)
T 1z57_A 318 AKRITLREALKH 329 (339)
T ss_dssp TTSCCHHHHTTS
T ss_pred ccccCHHHHhcC
Confidence 999999999876
No 274
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.5e-35 Score=337.94 Aligned_cols=244 Identities=24% Similarity=0.398 Sum_probs=198.3
Q ss_pred HHHhcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc------CHHHHHHHHHHHHhcC--CCCcccceeEEe
Q 046275 856 LEATNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ------GDREFTAEMETIGKIK--HRNLVPLLGYCK 926 (1176)
Q Consensus 856 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~ 926 (1176)
....++|++.+.||+|+||.||+|++. +++.||||++...... ..+.+.+|+.++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 344568999999999999999999876 6889999998654322 2245678999999996 599999999999
Q ss_pred eCCeeEEEEeeccC-CCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEEC-CCCcEEE
Q 046275 927 VGEERLLVYEYMRY-GSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLD-ENFEARV 1004 (1176)
Q Consensus 927 ~~~~~~lV~E~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl 1004 (1176)
..+..++||||+.+ ++|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||+++ +++.+||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL 191 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERG----ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKL 191 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEE
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEE
Confidence 99999999999986 89999998754 689999999999999999999999 999999999999999 7889999
Q ss_pred EeeccccccccccccccccccccCCcccCccccCCCCC-CchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhh
Q 046275 1005 SDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRC-STKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHA 1083 (1176)
Q Consensus 1005 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~ 1083 (1176)
+|||+++...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... .. .
T Consensus 192 ~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~----~ 256 (320)
T 3a99_A 192 IDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EI----I 256 (320)
T ss_dssp CCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HH----H
T ss_pred eeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hh----h
Confidence 9999998764322 234579999999999877665 678999999999999999999985421 11 1
Q ss_pred ccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1084 KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1084 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
.... .+. ...+ ..+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~--~~~----~~~~------~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 257 RGQV--FFR----QRVS------SECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp HCCC--CCS----SCCC------HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cccc--ccc----ccCC------HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1110 011 1111 135569999999999999999999875
No 275
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.9e-34 Score=337.16 Aligned_cols=334 Identities=20% Similarity=0.197 Sum_probs=186.3
Q ss_pred CCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccE
Q 046275 325 SSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKE 404 (1176)
Q Consensus 325 ~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~ 404 (1176)
++|++|++++|.++ .+|..+|..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..+ ..+++|++
T Consensus 45 ~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~--~~l~~L~~ 121 (390)
T 3o6n_A 45 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVF--QNVPLLTV 121 (390)
T ss_dssp CCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTT--TTCTTCCE
T ss_pred CCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHh--cCCCCCCE
Confidence 44555555555554 4455545555555555555555554444455555555555555555554333333 22444555
Q ss_pred EEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccc
Q 046275 405 LFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNEL 484 (1176)
Q Consensus 405 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 484 (1176)
|+|++|.++...+..|.++++|++|++++|++++..|..+..+++|++|++++|++++. .++.+++|+.|++++|.+
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLL 198 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCC
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccc
Confidence 55555555533333345555555555555555555555555555555555555555532 234455556666666655
Q ss_pred cCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhH
Q 046275 485 TGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPAL 564 (1176)
Q Consensus 485 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~ 564 (1176)
++. ....+|+.|++++|+++. +|.. ..++|++|+|++|.+++. ..+..+++|+.|+|++|.+++..|..
T Consensus 199 ~~~-----~~~~~L~~L~l~~n~l~~-~~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~- 267 (390)
T 3o6n_A 199 STL-----AIPIAVEELDASHNSINV-VRGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHP- 267 (390)
T ss_dssp SEE-----ECCSSCSEEECCSSCCCE-EECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGG-
T ss_pred ccc-----CCCCcceEEECCCCeeee-cccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhH-
Confidence 521 223456666666666653 2322 235566666666666532 35556666666666666665433321
Q ss_pred HhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcc
Q 046275 565 FKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDIS 644 (1176)
Q Consensus 565 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs 644 (1176)
|..+.+|++|+|+
T Consensus 268 -------------------------------------------------------------------~~~l~~L~~L~L~ 280 (390)
T 3o6n_A 268 -------------------------------------------------------------------FVKMQRLERLYIS 280 (390)
T ss_dssp -------------------------------------------------------------------GTTCSSCCEEECC
T ss_pred -------------------------------------------------------------------ccccccCCEEECC
Confidence 1122346666666
Q ss_pred cCcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCccccccccccccccccccCCC
Q 046275 645 YNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLTGMI 724 (1176)
Q Consensus 645 ~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~g~~ 724 (1176)
+|++++ +|..++.+++|+.|+|++|+++ .+|..++.+++|++|+|++|+++ .+| +..+++|+.|++++|++++.-
T Consensus 281 ~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~-~~~--~~~~~~L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 281 NNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLK--LSTHHTLKNLTLSHNDWDCNS 355 (390)
T ss_dssp SSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC-CCC--CCTTCCCSEEECCSSCEEHHH
T ss_pred CCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccc-eeC--chhhccCCEEEcCCCCccchh
Confidence 666664 4555666777777777777777 56667777777777777777777 344 566777777777777777542
Q ss_pred CCCCCccccCCccccCCCCCCCCC
Q 046275 725 PVMGQFETFQPAKFLNNSGLCGLP 748 (1176)
Q Consensus 725 p~~~~~~~~~~~~~~~n~~l~~~~ 748 (1176)
. ...+..+....+.++...|..+
T Consensus 356 ~-~~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 356 L-RALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp H-HHHTTTCCTTTBCCCCSCCCTT
T ss_pred H-HHHHHHHHhhcccccCceeccc
Confidence 2 1233444555566777777654
No 276
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=332.76 Aligned_cols=255 Identities=25% Similarity=0.353 Sum_probs=192.5
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCc--CHHHHHHHHHHHHhcCCCCcccceeEEeeCCe------
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQ--GDREFTAEMETIGKIKHRNLVPLLGYCKVGEE------ 930 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 930 (1176)
++|.+.+.||+|+||.||+|+++ +|+.||||++...... ..+.+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 57888999999999999999986 6899999998643222 23568899999999999999999999987654
Q ss_pred eEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccc
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMA 1010 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 1010 (1176)
.|+||||++ |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred EEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccc
Confidence 499999997 588877642 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccccccccCCcccCccccCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhc-----
Q 046275 1011 RLMSAMDTHLSVSTLAGTPGYVPPEYYQS-FRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAK----- 1084 (1176)
Q Consensus 1011 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~----- 1084 (1176)
+..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...+..+ .+.........
T Consensus 174 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~ 247 (353)
T 3coi_A 174 RHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEF 247 (353)
T ss_dssp TC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHH
T ss_pred cCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHH
Confidence 764322 234578999999999877 678999999999999999999999997643211 01111010000
Q ss_pred -------------cccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1085 -------------LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1085 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
........+......+.. -..+.+++.+||+.||++|||+++++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 248 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRA---SPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HTTCSCHHHHHHHHTSCBCSSCCTTTTCTTS---CHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhhHHHHHHHHhCcCCCCccHHHhcCCc---CHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000001111111111 1245679999999999999999999986
No 277
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.2e-34 Score=344.48 Aligned_cols=254 Identities=21% Similarity=0.308 Sum_probs=185.4
Q ss_pred CCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCeeEEEEeecc
Q 046275 861 GFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEERLLVYEYMR 939 (1176)
Q Consensus 861 ~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~ 939 (1176)
.|.+.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +|||||++++++.++...|+||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 45567899999999998877778999999998542 245678899999886 89999999999999999999999996
Q ss_pred CCCHHHHHhhccccCcc---cCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCC-------------CcEE
Q 046275 940 YGSLEDVLHNQKKVGIK---LNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDEN-------------FEAR 1003 (1176)
Q Consensus 940 ~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-------------~~~k 1003 (1176)
|+|.+++......... .++..++.++.||+.||+|||+. +|+||||||+||+++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 5999999876432211 13345678999999999999999 99999999999999654 4899
Q ss_pred EEeeccccccccccccc--cccccccCCcccCccccCC-------CCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCc
Q 046275 1004 VSDFGMARLMSAMDTHL--SVSTLAGTPGYVPPEYYQS-------FRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDN 1073 (1176)
Q Consensus 1004 l~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~ 1073 (1176)
|+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||......
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-- 246 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR-- 246 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH--
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh--
Confidence 99999998765432211 1234579999999999965 678999999999999999999 99998643211
Q ss_pred cHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1074 NLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1074 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
....... ..... .... . ........+.+++.+||+.||++|||+.+++++
T Consensus 247 -~~~i~~~--~~~~~-----~~~~-~-~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 247 -ESNIIRG--IFSLD-----EMKC-L-HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp -HHHHHHT--CCCCC-----CCTT-C-CCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HHHHhcC--CCCcc-----cccc-c-ccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 1111111 00100 0000 0 011122356679999999999999999999863
No 278
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2e-34 Score=329.97 Aligned_cols=257 Identities=22% Similarity=0.319 Sum_probs=177.2
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC-cCHHHHHHHHH-HHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG-QGDREFTAEME-TIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
++|.+.+.||+|+||.||+|+++ +|+.||||++..... ....++..|+. +++.++||||+++++++..++..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 57889999999999999999986 689999999865322 22344556665 6777899999999999999999999999
Q ss_pred eccCCCHHHHHhhccc-cCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 937 YMRYGSLEDVLHNQKK-VGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
|+++ +|.+++..... ....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9985 88888764221 1336899999999999999999999962 799999999999999999999999999976543
Q ss_pred ccccccccccccCCcccCcccc----CCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccccccc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYY----QSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVF 1091 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1091 (1176)
... .....||+.|+|||++ .+..++.++||||||+++|+|++|+.||....... ............ .+
T Consensus 179 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~-~~ 250 (327)
T 3aln_A 179 SIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF----DQLTQVVKGDPP-QL 250 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCCSCCC-CC
T ss_pred ccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----HHHHHHhcCCCC-CC
Confidence 221 2334799999999998 45678999999999999999999999997532110 111111111100 11
Q ss_pred CcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1092 DPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1092 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
........+ ..+.+++.+||+.||++|||+.+++++
T Consensus 251 ~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 251 SNSEEREFS------PSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCSSCCCC------HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCcccccCC------HHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 111111111 145669999999999999999999875
No 279
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.5e-34 Score=337.59 Aligned_cols=263 Identities=18% Similarity=0.222 Sum_probs=196.0
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcC-----------CCCcccceeEEee
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIK-----------HRNLVPLLGYCKV 927 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~ 927 (1176)
++|++.+.||+|+||+||+|++. +++.||||++.. .....+.+.+|+.++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS-CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC-CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 57999999999999999999985 688999998853 2223456888999999886 8999999999876
Q ss_pred CC----eeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEEC------
Q 046275 928 GE----ERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLD------ 997 (1176)
Q Consensus 928 ~~----~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~------ 997 (1176)
.+ ..++||||+ +++|.+++..... ..+++..++.++.||+.||+|||+++ +|+||||||+||+++
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhc--cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCc
Confidence 54 789999999 8899999986542 25899999999999999999999963 799999999999994
Q ss_pred CCCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCc--cH
Q 046275 998 ENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN--NL 1075 (1176)
Q Consensus 998 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~--~~ 1075 (1176)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4457999999999865432 2345789999999999998999999999999999999999999976432110 00
Q ss_pred HHHHHHhh-cccccc--------------------ccCc--------ccccCCCchHHHHHHHHHHHHHhccCCCCCCCC
Q 046275 1076 VGWVKQHA-KLKISD--------------------VFDP--------ELMKEDPNIEIELLQHLHVASACLDDRPWRRPT 1126 (1176)
Q Consensus 1076 ~~~~~~~~-~~~~~~--------------------~~~~--------~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt 1126 (1176)
........ .+..+. .+.. ...............+.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 01100000 000000 0000 000000111223445678999999999999999
Q ss_pred HHHHHHH
Q 046275 1127 MIQVMAM 1133 (1176)
Q Consensus 1127 ~~evl~~ 1133 (1176)
++|++++
T Consensus 328 ~~ell~h 334 (373)
T 1q8y_A 328 AGGLVNH 334 (373)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 9999986
No 280
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=5.7e-34 Score=324.89 Aligned_cols=251 Identities=21% Similarity=0.338 Sum_probs=177.8
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcC-H-HHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEEe
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQG-D-REFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 936 (1176)
++|++.+.||+|+||.||+|+++ +|+.||||++....... . +.+.++..+++.++||||+++++++.+++..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 56888999999999999999986 68999999986543221 2 234445556788899999999999999999999999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHH-NCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
|+ ++.+..+..... ..+++..++.++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||++.....
T Consensus 105 ~~-~~~~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 105 LM-GTCAEKLKKRMQ---GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp CC-SEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred cc-CCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 99 556665554332 368999999999999999999998 5 899999999999999999999999999976543
Q ss_pred ccccccccccccCCcccCccccC-----CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccc
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQ-----SFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDV 1090 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 1090 (1176)
... .....||+.|+|||++. ...++.++||||||+++|||++|+.||..... .. ............ .
T Consensus 178 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~-~~~~~~~~~~~~-~ 249 (318)
T 2dyl_A 178 DKA---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT---DF-EVLTKVLQEEPP-L 249 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS---HH-HHHHHHHHSCCC-C
T ss_pred Ccc---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc---cH-HHHHHHhccCCC-C
Confidence 222 23457899999999984 55788999999999999999999999975321 11 111111111111 0
Q ss_pred cCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1091 FDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1091 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
++ . ....+ ..+.+++.+||+.||.+|||+++++++
T Consensus 250 ~~-~-~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 250 LP-G-HMGFS------GDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CC-S-SSCCC------HHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CC-c-cCCCC------HHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00 0 00111 135569999999999999999999886
No 281
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=7.6e-34 Score=329.20 Aligned_cols=260 Identities=22% Similarity=0.308 Sum_probs=198.0
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CC-CEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCC------cccceeEEeeCCe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DG-STVAIKKLIHISGQGDREFTAEMETIGKIKHRN------LVPLLGYCKVGEE 930 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 930 (1176)
.++|++.+.||+|+||+||+|++. ++ +.||+|.+... ....+.+.+|+.++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 367999999999999999999986 34 68999988532 233456888999999997665 8999999999999
Q ss_pred eEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEE--------------
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLL-------------- 996 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll-------------- 996 (1176)
.++||||+ ++++.+++..... .++++.+++.++.|++.||+|||+. +|+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNF--QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred EEEEEecc-CCChHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccc
Confidence 99999999 5678887765432 3689999999999999999999999 99999999999999
Q ss_pred -----CCCCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCC
Q 046275 997 -----DENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFG 1071 (1176)
Q Consensus 997 -----~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~ 1071 (1176)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+..
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 56788999999999764332 23457999999999999999999999999999999999999999754311
Q ss_pred CccHHHHHHHhhccccccc-----------cCcc-cc------------------cCCCchHHHHHHHHHHHHHhccCCC
Q 046275 1072 DNNLVGWVKQHAKLKISDV-----------FDPE-LM------------------KEDPNIEIELLQHLHVASACLDDRP 1121 (1176)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~~~-----------~~~~-~~------------------~~~~~~~~~~~~~~~li~~cl~~dp 1121 (1176)
.......... ...+.. .... .+ ............+.+++.+||+.||
T Consensus 246 --~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 322 (355)
T 2eu9_A 246 --EHLVMMEKIL-GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP 322 (355)
T ss_dssp --HHHHHHHHHH-CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred --HHHHHHHHHc-CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCCh
Confidence 1111111110 000000 0000 00 0000111123456789999999999
Q ss_pred CCCCCHHHHHHH
Q 046275 1122 WRRPTMIQVMAM 1133 (1176)
Q Consensus 1122 ~~RPt~~evl~~ 1133 (1176)
++|||++|++++
T Consensus 323 ~~Rpt~~e~l~h 334 (355)
T 2eu9_A 323 AQRITLAEALLH 334 (355)
T ss_dssp TTSCCHHHHTTS
T ss_pred hhCcCHHHHhcC
Confidence 999999999875
No 282
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-34 Score=341.25 Aligned_cols=250 Identities=20% Similarity=0.290 Sum_probs=186.0
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCeeEEEEeec
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEERLLVYEYM 938 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~ 938 (1176)
.+|.+.++||+|+||+||.....+|+.||||++.... ...+.+|+++++++ +|||||++++++.+....|+||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 4588889999999999776666689999999985422 23356899999999 7999999999999999999999999
Q ss_pred cCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC-----CCcEEEEeecccccc
Q 046275 939 RYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE-----NFEARVSDFGMARLM 1013 (1176)
Q Consensus 939 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~DfGla~~~ 1013 (1176)
. |+|.+++..... ...+..++.++.||+.||+|||+. +|+||||||+||+++. ...+||+|||+|+..
T Consensus 101 ~-g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 101 A-ATLQEYVEQKDF---AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp S-EEHHHHHHSSSC---CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred C-CCHHHHHHhcCC---CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 6 599999986542 345556778999999999999999 9999999999999953 335889999999876
Q ss_pred cccccc-ccccccccCCcccCccccC---CCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCCCccHHHHHHHhhccccc
Q 046275 1014 SAMDTH-LSVSTLAGTPGYVPPEYYQ---SFRCSTKGDVYSYGVVLLELLT-GKRPTDSADFGDNNLVGWVKQHAKLKIS 1088 (1176)
Q Consensus 1014 ~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 1088 (1176)
...... .......||+.|+|||++. ...++.++||||+||++|||++ |..||..... ............
T Consensus 174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~------~~~~~~~~~~~~ 247 (432)
T 3p23_A 174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ------RQANILLGACSL 247 (432)
T ss_dssp ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT------HHHHHHTTCCCC
T ss_pred cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH------HHHHHHhccCCc
Confidence 543221 1234567999999999997 4567889999999999999999 9999854321 111111111111
Q ss_pred cccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1089 DVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1089 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
....+ +. ..-..+.+++.+||+.||++|||++++++|
T Consensus 248 ~~~~~------~~--~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 248 DCLHP------EK--HEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp TTSCT------TC--HHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccCc------cc--cccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 11111 01 122235679999999999999999999854
No 283
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.1e-33 Score=329.85 Aligned_cols=315 Identities=22% Similarity=0.248 Sum_probs=196.4
Q ss_pred CCCccEEEeCCCccccccc--CCCCCccceeeccCCcccccCC-CccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEe
Q 046275 195 CDELKQLALKGNKVTGDIN--VSKCKNLQFLDVSSNNFSMAVP-SFGDCLALEYLDISANKFTGDVGHAISACEHLSFLN 271 (1176)
Q Consensus 195 ~~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 271 (1176)
+++++.|++++|.++.... +..+++|++|++++|.++.+++ .+..+++|++|+|++|++++..+..+.++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 3456666666666655332 4555666666666666665544 456666666666666666665555566666666666
Q ss_pred eccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCC
Q 046275 272 VSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSN 351 (1176)
Q Consensus 272 Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~ 351 (1176)
|++|.++. +|..++..+++|++|++++|++++..|..|..+++|++|++++|+++ .++ +..+++
T Consensus 124 L~~n~l~~------------l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~---~~~l~~ 187 (390)
T 3o6n_A 124 LERNDLSS------------LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVD---LSLIPS 187 (390)
T ss_dssp CCSSCCCC------------CCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCS-BCC---GGGCTT
T ss_pred CCCCccCc------------CCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCC-ccc---cccccc
Confidence 66665552 22222333455555555555555544555555555555555555554 233 233455
Q ss_pred CCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEc
Q 046275 352 LKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHL 431 (1176)
Q Consensus 352 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 431 (1176)
|++|++++|.+++. ...++ |++|++++|.++.. |... .++|+.|++
T Consensus 188 L~~L~l~~n~l~~~-----~~~~~--------------------------L~~L~l~~n~l~~~-~~~~--~~~L~~L~l 233 (390)
T 3o6n_A 188 LFHANVSYNLLSTL-----AIPIA--------------------------VEELDASHNSINVV-RGPV--NVELTILKL 233 (390)
T ss_dssp CSEEECCSSCCSEE-----ECCSS--------------------------CSEEECCSSCCCEE-ECCC--CSSCCEEEC
T ss_pred cceeeccccccccc-----CCCCc--------------------------ceEEECCCCeeeec-cccc--cccccEEEC
Confidence 55555555544421 12234 55555555555432 2211 256666777
Q ss_pred CCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCC
Q 046275 432 SFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGE 511 (1176)
Q Consensus 432 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 511 (1176)
++|++++. ..+..+++|++|++++|.+++..|..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|+++ .
T Consensus 234 ~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l~-~ 309 (390)
T 3o6n_A 234 QHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-H 309 (390)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECCSSCCC-C
T ss_pred CCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECCCCcce-e
Confidence 77766642 45666777777777777777666777777777777788888777 35666677888888888888888 5
Q ss_pred CCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHh
Q 046275 512 IPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFK 566 (1176)
Q Consensus 512 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~ 566 (1176)
+|..+..+++|++|+|++|++++ +| +..+++|+.|++++|++++.....++.
T Consensus 310 ~~~~~~~l~~L~~L~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~~~~~~~~~ 361 (390)
T 3o6n_A 310 VERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNSLRALFR 361 (390)
T ss_dssp CGGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHHHHHHTT
T ss_pred cCccccccCcCCEEECCCCccce-eC--chhhccCCEEEcCCCCccchhHHHHHH
Confidence 77778888889999999998874 44 777889999999999998765555544
No 284
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.4e-33 Score=315.66 Aligned_cols=231 Identities=15% Similarity=0.119 Sum_probs=181.9
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcC---HHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEEE
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQG---DREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 935 (1176)
++|++.+.||+|+||.||+|++. +|+.||+|.+....... .+.+.+|+.++++++||||+++++++.+++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999987 48999999986543322 256889999999999999999999999999999999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccccccc
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSA 1015 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 1015 (1176)
||+++++|.++++.. ....++..++.|++.||+|||+. +|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 999999999999542 34557888999999999999999 99999999999999999999997443
Q ss_pred ccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccC-c-
Q 046275 1016 MDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFD-P- 1093 (1176)
Q Consensus 1016 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 1093 (1176)
|++ .++.++|||||||++|||+||+.||...+....-. ........... +
T Consensus 175 ---------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~------~~~~~~~~~~~~~~ 226 (286)
T 3uqc_A 175 ---------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA------PAERDTAGQPIEPA 226 (286)
T ss_dssp ---------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE------ECCBCTTSCBCCHH
T ss_pred ---------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH------HHHHHhccCCCChh
Confidence 333 36889999999999999999999998654321100 00000000000 0
Q ss_pred ccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhhCC
Q 046275 1094 ELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 1141 (1176)
Q Consensus 1094 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~L~~i~~~~ 1141 (1176)
......+ ..+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 227 ~~~~~~~------~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 227 DIDRDIP------FQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHCTTSC------HHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred hcccCCC------HHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 1111111 135569999999999999 9999999999988543
No 285
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.1e-34 Score=347.78 Aligned_cols=271 Identities=24% Similarity=0.317 Sum_probs=200.5
Q ss_pred hcCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeecc-CCcCHHHHHHHHHHHHhcCCCCcccceeEEee------CCe
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHI-SGQGDREFTAEMETIGKIKHRNLVPLLGYCKV------GEE 930 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 930 (1176)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|++++++++||||+++++++.. ...
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 368999999999999999999885 6899999988643 22334568899999999999999999998765 667
Q ss_pred eEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCc---EEEEee
Q 046275 931 RLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFE---ARVSDF 1007 (1176)
Q Consensus 931 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Df 1007 (1176)
.++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 8999999999999999986542 23588899999999999999999999 9999999999999987665 999999
Q ss_pred ccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhc---
Q 046275 1008 GMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAK--- 1084 (1176)
Q Consensus 1008 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~--- 1084 (1176)
|++........ .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... ....|......
T Consensus 169 G~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~~~~~ 241 (676)
T 3qa8_A 169 GYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVREKSN 241 (676)
T ss_dssp CCCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC----
T ss_pred ccccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhhcccc
Confidence 99987654322 245679999999999999999999999999999999999999996532 11122110000
Q ss_pred ------ccccc--ccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHH-----HHHHHHHHhhC
Q 046275 1085 ------LKISD--VFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQ-----VMAMFKEIQAG 1140 (1176)
Q Consensus 1085 ------~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~e-----vl~~L~~i~~~ 1140 (1176)
..... .+.................+.+++.+||+.||++|||+++ ..+.++++...
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 00000 0011100000001112234567999999999999999988 45666666644
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.3e-32 Score=317.69 Aligned_cols=306 Identities=25% Similarity=0.356 Sum_probs=169.4
Q ss_pred cCCCCccEEEeCCCcccccccCCCCCccceeeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEee
Q 046275 193 NGCDELKQLALKGNKVTGDINVSKCKNLQFLDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNV 272 (1176)
Q Consensus 193 ~~~~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 272 (1176)
..+++|++|++++|.+.....+..+++|++|++++|+++.+++ +..+++|++|++++|.+++. ..+.++++|++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~~~~~~~~~~~L~~L~l~~n~i~~~~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l 117 (347)
T 4fmz_A 41 EELESITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYL 117 (347)
T ss_dssp HHHTTCSEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEEC
T ss_pred hhcccccEEEEeCCccccchhhhhcCCccEEEccCCccccchh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEEC
Confidence 3455566666666666555555555666666666665555444 55555566666666555543 23555555555555
Q ss_pred ccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCC
Q 046275 273 SSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNL 352 (1176)
Q Consensus 273 s~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L 352 (1176)
++|.+++..+ +..+++|++|++++|.....+ ..+..+++|++|++++|.+. .++. +..+++|
T Consensus 118 ~~n~i~~~~~--------------~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~-~~~~--~~~l~~L 179 (347)
T 4fmz_A 118 NEDNISDISP--------------LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVK-DVTP--IANLTDL 179 (347)
T ss_dssp TTSCCCCCGG--------------GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCC-CCGG--GGGCTTC
T ss_pred cCCcccCchh--------------hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcC-Cchh--hccCCCC
Confidence 5555542111 122344555555555333222 22444455555555555444 2222 3444444
Q ss_pred CEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcC
Q 046275 353 KELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLS 432 (1176)
Q Consensus 353 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 432 (1176)
++|++++|.+++..+ +..++ +|+.|++++|.+++..+ +..+++|++|+++
T Consensus 180 ~~L~l~~n~l~~~~~--~~~l~--------------------------~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~ 229 (347)
T 4fmz_A 180 YSLSLNYNQIEDISP--LASLT--------------------------SLHYFTAYVNQITDITP--VANMTRLNSLKIG 229 (347)
T ss_dssp SEEECTTSCCCCCGG--GGGCT--------------------------TCCEEECCSSCCCCCGG--GGGCTTCCEEECC
T ss_pred CEEEccCCccccccc--ccCCC--------------------------ccceeecccCCCCCCch--hhcCCcCCEEEcc
Confidence 444444444442211 44444 45555555555543322 5555666666666
Q ss_pred CccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCC
Q 046275 433 FNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEI 512 (1176)
Q Consensus 433 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 512 (1176)
+|++++..+ +..+++|++|++++|.+++. +.+..+++|++|++++|++++. ..+..+++|+.|++++|++++..
T Consensus 230 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~ 303 (347)
T 4fmz_A 230 NNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNED 303 (347)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGG
T ss_pred CCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcC
Confidence 666663322 56666666666666666532 3466666777777777777643 34667777777777777777666
Q ss_pred CccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCc
Q 046275 513 PTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFN 557 (1176)
Q Consensus 513 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 557 (1176)
|..++.+++|++|+|++|++++..| +..+++|+.|++++|+++
T Consensus 304 ~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 304 MEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 6777777777777777777775444 666777777777777664
No 287
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.3e-33 Score=344.57 Aligned_cols=314 Identities=22% Similarity=0.244 Sum_probs=195.6
Q ss_pred CCccEEEeCCCccccccc--CCCCCccceeeccCCcccccCC-CccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEee
Q 046275 196 DELKQLALKGNKVTGDIN--VSKCKNLQFLDVSSNNFSMAVP-SFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNV 272 (1176)
Q Consensus 196 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 272 (1176)
.+++.|++++|.+..... +..+++|++|+|++|.++++++ .|..+++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 455666666666554322 4455566666666666655544 4555666666666666665555555555555666666
Q ss_pred ccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCC
Q 046275 273 SSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNL 352 (1176)
Q Consensus 273 s~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L 352 (1176)
++|.|++. |..++..+++|++|+|++|.+++..|..|..+++|++|+|++|.++ .++ +..+++|
T Consensus 131 ~~n~l~~l------------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~---~~~l~~L 194 (597)
T 3oja_B 131 ERNDLSSL------------PRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVD---LSLIPSL 194 (597)
T ss_dssp CSSCCCCC------------CTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS-BCC---GGGCTTC
T ss_pred eCCCCCCC------------CHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC-CcC---hhhhhhh
Confidence 55555522 2222223345555555555555554555555555555555555554 233 2334455
Q ss_pred CEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcC
Q 046275 353 KELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLS 432 (1176)
Q Consensus 353 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 432 (1176)
++|++++|.+++ +...+ +|+.|++++|.++.. +..+ .++|+.|+|+
T Consensus 195 ~~L~l~~n~l~~-----l~~~~--------------------------~L~~L~ls~n~l~~~-~~~~--~~~L~~L~L~ 240 (597)
T 3oja_B 195 FHANVSYNLLST-----LAIPI--------------------------AVEELDASHNSINVV-RGPV--NVELTILKLQ 240 (597)
T ss_dssp SEEECCSSCCSE-----EECCT--------------------------TCSEEECCSSCCCEE-ECSC--CSCCCEEECC
T ss_pred hhhhcccCcccc-----ccCCc--------------------------hhheeeccCCccccc-cccc--CCCCCEEECC
Confidence 555555554442 11223 355555555555422 2111 1466777777
Q ss_pred CccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCC
Q 046275 433 FNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEI 512 (1176)
Q Consensus 433 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 512 (1176)
+|.+++ +..+..+++|+.|+|++|.+.+..|..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+
T Consensus 241 ~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i 316 (597)
T 3oja_B 241 HNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HV 316 (597)
T ss_dssp SSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CC
T ss_pred CCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-cc
Confidence 777764 3566777777777777777777777777777888888888888874 5667777888999999999888 67
Q ss_pred CccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHh
Q 046275 513 PTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFK 566 (1176)
Q Consensus 513 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~ 566 (1176)
|..++.+++|++|+|++|.+++. | +..+++|+.|+|++|+++|..+..++.
T Consensus 317 ~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~~~~ 367 (597)
T 3oja_B 317 ERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRALFR 367 (597)
T ss_dssp GGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHHHTT
T ss_pred CcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHHHHHH
Confidence 88888899999999999998743 3 677889999999999999876555544
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.8e-32 Score=315.04 Aligned_cols=308 Identities=21% Similarity=0.289 Sum_probs=236.1
Q ss_pred cccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCcccccccCCCCCccceeeccCCcccccCCCccCCCCC
Q 046275 164 AGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGDINVSKCKNLQFLDVSSNNFSMAVPSFGDCLAL 243 (1176)
Q Consensus 164 ~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L 243 (1176)
.+..+++|++|++++|.++.+ +. +..+++|++|++++|.+++...+..+++|++|++++|.++.+ +.+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~~---~~--~~~~~~L~~L~l~~n~i~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVASI---QG--IEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDI-SALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCCC---TT--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC-GGGTTCTTC
T ss_pred cchhcccccEEEEeCCccccc---hh--hhhcCCccEEEccCCccccchhhhcCCcCCEEEccCCcccCc-hHHcCCCcC
Confidence 345678999999999999874 32 678999999999999999877799999999999999999976 468999999
Q ss_pred cEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccccC
Q 046275 244 EYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGS 323 (1176)
Q Consensus 244 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 323 (1176)
++|++++|++++..+ +..+++|++|++++|.....++. +..+++|++|++++|.+.+..+ +..
T Consensus 113 ~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~~-------------~~~l~~L~~L~l~~~~~~~~~~--~~~ 175 (347)
T 4fmz_A 113 RELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLSP-------------LSNMTGLNYLTVTESKVKDVTP--IAN 175 (347)
T ss_dssp SEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCGG-------------GTTCTTCCEEECCSSCCCCCGG--GGG
T ss_pred CEEECcCCcccCchh--hccCCceeEEECCCCCCcccccc-------------hhhCCCCcEEEecCCCcCCchh--hcc
Confidence 999999999997655 89999999999999965432221 3456899999999999985543 889
Q ss_pred CCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCcc
Q 046275 324 CSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLK 403 (1176)
Q Consensus 324 l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~ 403 (1176)
+++|++|++++|.++ .++. +..+++|++|++++|.+++..+ +..+++|++|++++|++++. +.
T Consensus 176 l~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~----------- 238 (347)
T 4fmz_A 176 LTDLYSLSLNYNQIE-DISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP----------- 238 (347)
T ss_dssp CTTCSEEECTTSCCC-CCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-----------
T ss_pred CCCCCEEEccCCccc-cccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-----------
Confidence 999999999999998 5554 6889999999999999996544 78888888888888888732 22
Q ss_pred EEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeeccccc
Q 046275 404 ELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNE 483 (1176)
Q Consensus 404 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 483 (1176)
+..+++|++|++++|++++. +.+..+++|++|++++|.+++. +.+..+++|++|+|++|+
T Consensus 239 ----------------~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~ 298 (347)
T 4fmz_A 239 ----------------LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQ 298 (347)
T ss_dssp ----------------GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSC
T ss_pred ----------------hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCc
Confidence 33444555555555555432 2455555566666666655532 245666777777777777
Q ss_pred ccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCccc
Q 046275 484 LTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFY 533 (1176)
Q Consensus 484 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 533 (1176)
+++..|..|.++++|++|++++|++++..| +..+++|++|++++|.|+
T Consensus 299 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 299 LGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 777777777777778888888887775544 677778888888887764
No 289
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.3e-33 Score=329.74 Aligned_cols=243 Identities=16% Similarity=0.158 Sum_probs=180.1
Q ss_pred cCCCCCceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC---cCHHHHHHHHHHHHhcCC-CCccccee-----------
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG---QGDREFTAEMETIGKIKH-RNLVPLLG----------- 923 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~l~~----------- 923 (1176)
.+|...++||+|+||+||+|++. +|+.||||++..... ...+.+.+|+.+++.++| ++......
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 45777889999999999999976 699999998863322 225678999999999987 32221111
Q ss_pred ----------EEee-----CCeeEEEEeeccCCCHHHHHhhc---cccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 046275 924 ----------YCKV-----GEERLLVYEYMRYGSLEDVLHNQ---KKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHII 985 (1176)
Q Consensus 924 ----------~~~~-----~~~~~lV~E~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iv 985 (1176)
++.. ....+++|+++ +++|.+++... ......+++..++.++.|+++||+|||+. +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 1111 12346777766 57999998532 11233688999999999999999999999 999
Q ss_pred eCCCCCCCEEECCCCcEEEEeeccccccccccccccccccccCCcccCcccc----------CCCCCCchhhhHHHHHHH
Q 046275 986 HRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYY----------QSFRCSTKGDVYSYGVVL 1055 (1176)
Q Consensus 986 H~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwSlGvil 1055 (1176)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 9999999999999999999999998765432 245567 999999999 666788999999999999
Q ss_pred HHHHcCCCCCCCCCCCCccHHHHHHHhhccccccccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1056 LELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1056 ~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
|||++|+.||........ ....+.. ....| ..+.+++.+||+.||++|||+.+++++
T Consensus 308 ~elltg~~Pf~~~~~~~~-------------~~~~~~~--~~~~~------~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGG-------------SEWIFRS--CKNIP------QPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHHSSCCCCTTGGGSC-------------SGGGGSS--CCCCC------HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHCCCCCCCcchhhh-------------HHHHHhh--cccCC------HHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 999999999975431110 0000110 01112 235669999999999999998888654
No 290
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.6e-32 Score=309.91 Aligned_cols=229 Identities=21% Similarity=0.255 Sum_probs=176.8
Q ss_pred cCCCCC-ceEeEeCceEEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHH-HhcCCCCcccceeEEee----CCeeE
Q 046275 860 NGFHND-SLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETI-GKIKHRNLVPLLGYCKV----GEERL 932 (1176)
Q Consensus 860 ~~y~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~~ 932 (1176)
++|.+. +.||+|+||.||+|++. +++.||+|++.. ...+.+|+.++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456666 78999999999999985 689999999853 34677899888 55699999999999877 67789
Q ss_pred EEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECC---CCcEEEEeecc
Q 046275 933 LVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDE---NFEARVSDFGM 1009 (1176)
Q Consensus 933 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfGl 1009 (1176)
+||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 92 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EEECCCCSCBHHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 9999999999999998754 23689999999999999999999999 9999999999999998 78899999999
Q ss_pred ccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhc-cccc
Q 046275 1010 ARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAK-LKIS 1088 (1176)
Q Consensus 1010 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~-~~~~ 1088 (1176)
+.... +..++.++||||+||++|||++|+.||....... ....... ....
T Consensus 167 a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-----~~~~~~~~~~~~ 217 (299)
T 3m2w_A 167 AKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----ISPGMKTRIRMG 217 (299)
T ss_dssp CEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------CCSCCSSCTT
T ss_pred ccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh-----hhHHHHHHHhhc
Confidence 86432 1346789999999999999999999996543111 0000000 0000
Q ss_pred c-ccCcccccCCCchHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 046275 1089 D-VFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAM 1133 (1176)
Q Consensus 1089 ~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt~~evl~~ 1133 (1176)
. .++...+...+ ..+.+++.+||+.||++|||+.|++++
T Consensus 218 ~~~~~~~~~~~~~------~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 218 QYEFPNPEWSEVS------EEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CCSSCHHHHTTSC------HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccCCchhcccCC------HHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0 00100001111 245679999999999999999999987
No 291
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.4e-33 Score=349.24 Aligned_cols=238 Identities=21% Similarity=0.347 Sum_probs=189.6
Q ss_pred cCCCCCceEeEeCceEEEEEEEC--CCCEEEEEEeeccCC-cCHHHHHHHHHHHHhcCCCCcccceeEEeeCCe-----e
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLK--DGSTVAIKKLIHISG-QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEE-----R 931 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~ 931 (1176)
++|++.+.||+|+||+||+|++. +|+.||||++..... ...+.+.+|+.++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67999999999999999999986 588999998864322 233468899999999999999999999987655 6
Q ss_pred EEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccc
Q 046275 932 LLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1011 (1176)
Q Consensus 932 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 1011 (1176)
|+||||+++++|.+++.. .+++.+++.++.||+.||.|||+. +||||||||+||+++.+ .+||+|||+++
T Consensus 160 ~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccch
Confidence 999999999999987653 589999999999999999999999 99999999999999986 89999999998
Q ss_pred ccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCCCccHHHHHHHhhcccccccc
Q 046275 1012 LMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVF 1091 (1176)
Q Consensus 1012 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1091 (1176)
..... ....||+.|+|||++.+. ++.++|||||||++|+|++|..||....... +
T Consensus 230 ~~~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--------------~---- 284 (681)
T 2pzi_A 230 RINSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG--------------L---- 284 (681)
T ss_dssp ETTCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS--------------C----
T ss_pred hcccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc--------------c----
Confidence 65432 345799999999998765 4899999999999999999998875421110 0
Q ss_pred CcccccCCCchHHHHHHHHHHHHHhccCCCCCCCC-HHHHHHHHHHH
Q 046275 1092 DPELMKEDPNIEIELLQHLHVASACLDDRPWRRPT-MIQVMAMFKEI 1137 (1176)
Q Consensus 1092 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~RPt-~~evl~~L~~i 1137 (1176)
. ... ........+.+++.+||+.||++||+ ++++.+.+..+
T Consensus 285 ~----~~~-~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 285 P----EDD-PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp C----TTC-HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred c----ccc-cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 0 000 00111234567999999999999995 55566666554
No 292
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=6.6e-33 Score=318.64 Aligned_cols=238 Identities=16% Similarity=0.182 Sum_probs=180.4
Q ss_pred cCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCC--------cCHHHHHHHHHHHHhcC---------CCCcccc-
Q 046275 860 NGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISG--------QGDREFTAEMETIGKIK---------HRNLVPL- 921 (1176)
Q Consensus 860 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------h~niv~l- 921 (1176)
++|++.+.||+|+||+||+|++ +|+.||||++..... ...+.+.+|+.++++++ |||||++
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 5688999999999999999998 689999999975422 22367899999999886 5555554
Q ss_pred ----------------eeEEee-------------CCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHH
Q 046275 922 ----------------LGYCKV-------------GEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARG 972 (1176)
Q Consensus 922 ----------------~~~~~~-------------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~ 972 (1176)
++++.+ ....|+||||+++|++.+.+.+. .+++..++.++.||+.|
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~-----~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK-----LSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT-----CCCHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc-----CCCHHHHHHHHHHHHHH
Confidence 444443 67899999999999777666432 58999999999999999
Q ss_pred HHHHH-hcCCCCeeeCCCCCCCEEECCCC--------------------cEEEEeeccccccccccccccccccccCCcc
Q 046275 973 LAFLH-HNCIPHIIHRDMKSSNVLLDENF--------------------EARVSDFGMARLMSAMDTHLSVSTLAGTPGY 1031 (1176)
Q Consensus 973 L~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y 1031 (1176)
|+||| +. +|+||||||+|||++.++ .+||+|||+|+.... ....||+.|
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y 243 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVS 243 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCT
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecc
Confidence 99999 88 999999999999999887 899999999986543 234799999
Q ss_pred cCccccCCCCCCchhhhHHHHHH-HHHHHcCCCCCCCCCCCCccHHHHHHHh----h-ccccccccCcccccCCCchHHH
Q 046275 1032 VPPEYYQSFRCSTKGDVYSYGVV-LLELLTGKRPTDSADFGDNNLVGWVKQH----A-KLKISDVFDPELMKEDPNIEIE 1105 (1176)
Q Consensus 1032 ~aPE~~~~~~~~~~~DvwSlGvi-l~elltg~~P~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~ 1105 (1176)
+|||++.+.. +.++||||+|++ .+++++|..||.. ..|.... . .........+. ....-
T Consensus 244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~--------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 308 (336)
T 2vuw_A 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN--------VLWLHYLTDKMLKQMTFKTKCNTP------AMKQI 308 (336)
T ss_dssp TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH--------HHHHHHHHHHHHHTCCCSSCCCSH------HHHHH
T ss_pred cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc--------hhhhhHHHHhhhhhhccCcccchh------hhhhc
Confidence 9999998766 899999998777 7888999999732 1121111 1 11111110111 11112
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHH-HH
Q 046275 1106 LLQHLHVASACLDDRPWRRPTMIQVM-AM 1133 (1176)
Q Consensus 1106 ~~~~~~li~~cl~~dp~~RPt~~evl-~~ 1133 (1176)
-..+.+|+.+||+.| |++|++ +|
T Consensus 309 s~~~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 309 KRKIQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred CHHHHHHHHHHhccC-----CHHHHHhcC
Confidence 345678999999976 999988 54
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=4.2e-31 Score=302.93 Aligned_cols=246 Identities=28% Similarity=0.355 Sum_probs=211.6
Q ss_pred CccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEc
Q 046275 302 SLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDL 381 (1176)
Q Consensus 302 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 381 (1176)
+++.++++++.++ .+|..+. ++|++|++++|.++ .++...|..+++|++|+|++|.+++..|..+.++++|++|+|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCC-ccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 6888888888887 5666553 68899999999987 566666788899999999999998877888999999999999
Q ss_pred cCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCcccc--CCCCccccCCCccCeeeccccc
Q 046275 382 SSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLT--GTIPSSLGSLSKLQDLKLWLNQ 459 (1176)
Q Consensus 382 s~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~ 459 (1176)
++|+++ .+|..++ ++|++|++++|++++..+..+.++++|++|++++|+++ +..|..+..+ +|+.|++++|+
T Consensus 110 ~~n~l~-~l~~~~~----~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~ 183 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP----SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAK 183 (332)
T ss_dssp CSSCCC-SCCSSCC----TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSB
T ss_pred CCCcCC-ccCcccc----ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCC
Confidence 999988 6776553 67999999999999777778899999999999999996 4678888888 99999999999
Q ss_pred ccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCC
Q 046275 460 LHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPE 539 (1176)
Q Consensus 460 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 539 (1176)
+++ +|..+. ++|++|+|++|++++..|..|.++++|+.|+|++|++++..|.++..+++|++|+|++|+++ .+|..
T Consensus 184 l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~ 259 (332)
T 2ft3_A 184 LTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAG 259 (332)
T ss_dssp CSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTT
T ss_pred CCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChh
Confidence 984 676665 78999999999999888889999999999999999999888888999999999999999998 88989
Q ss_pred CCCCCCCCEEEccCCCCcccCCh
Q 046275 540 LGDCRSLIWLDLNTNLFNGSIPP 562 (1176)
Q Consensus 540 ~~~l~~L~~L~L~~N~l~g~ip~ 562 (1176)
+..+++|+.|++++|++++ +|.
T Consensus 260 l~~l~~L~~L~l~~N~l~~-~~~ 281 (332)
T 2ft3_A 260 LPDLKLLQVVYLHTNNITK-VGV 281 (332)
T ss_dssp GGGCTTCCEEECCSSCCCB-CCT
T ss_pred hhcCccCCEEECCCCCCCc-cCh
Confidence 9999999999999999974 443
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.1e-30 Score=299.39 Aligned_cols=295 Identities=19% Similarity=0.265 Sum_probs=196.8
Q ss_pred CccceeeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhh
Q 046275 218 KNLQFLDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLA 297 (1176)
Q Consensus 218 ~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~ 297 (1176)
.+++.++++++.++.++..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..+.
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~----------- 97 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFA----------- 97 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTT-----------
T ss_pred CCCeEEEecCCCccccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhc-----------
Confidence 467777888877776666543 5778888888888877777788888888888888887755554433
Q ss_pred hcCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCC--CCcccccCCCC
Q 046275 298 DLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTG--ALPDSLSNLTN 375 (1176)
Q Consensus 298 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~ 375 (1176)
.+++|++|+|++|+++ .+|..+. ++|++|++++|+++ .++...|..+++|++|++++|.++. ..+..+.++++
T Consensus 98 -~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~ 172 (330)
T 1xku_A 98 -PLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK 172 (330)
T ss_dssp -TCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTT
T ss_pred -CCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCccc-ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCC
Confidence 2467888888888887 4555544 78888888888887 6777778888889999998888864 56777888888
Q ss_pred CCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeec
Q 046275 376 LETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKL 455 (1176)
Q Consensus 376 L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 455 (1176)
|++|++++|.++ .+|..+ .++|++|+|++|.+++..|..+..+++|++|+|++|++++..+..+..+++|++|+|
T Consensus 173 L~~L~l~~n~l~-~l~~~~----~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 247 (330)
T 1xku_A 173 LSYIRIADTNIT-TIPQGL----PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHL 247 (330)
T ss_dssp CCEEECCSSCCC-SCCSSC----CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEEC
T ss_pred cCEEECCCCccc-cCCccc----cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEEC
Confidence 888888888887 455543 246777777777776666666666777777777777766555556666666666666
Q ss_pred ccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccc-
Q 046275 456 WLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYG- 534 (1176)
Q Consensus 456 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~- 534 (1176)
++|+++ .+|..+..+++|++|+|++|+|++..+..|.... .....+.|+.|++++|.+..
T Consensus 248 ~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~------------------~~~~~~~l~~l~l~~N~~~~~ 308 (330)
T 1xku_A 248 NNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG------------------YNTKKASYSGVSLFSNPVQYW 308 (330)
T ss_dssp CSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS------------------CCTTSCCCSEEECCSSSSCGG
T ss_pred CCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcc------------------cccccccccceEeecCccccc
Confidence 666666 5555566666666666666666654444443220 00012445555555555532
Q ss_pred -cCCCCCCCCCCCCEEEccCC
Q 046275 535 -RIPPELGDCRSLIWLDLNTN 554 (1176)
Q Consensus 535 -~~p~~~~~l~~L~~L~L~~N 554 (1176)
..|..|..+.+|+.++|++|
T Consensus 309 ~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 309 EIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp GSCGGGGTTCCCGGGEEC---
T ss_pred ccCccccccccceeEEEeccc
Confidence 33445555556666666555
No 295
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=6.2e-35 Score=351.31 Aligned_cols=354 Identities=21% Similarity=0.203 Sum_probs=210.9
Q ss_pred CCccEEEccCCcccc----cCCccccCCCCCcEEEccCCcCcccCCHHHHhcCC----CCCEEEccCcccCC----CCcc
Q 046275 301 SSLVKLDLSSNNLSG----KVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMS----NLKELVLSFNDFTG----ALPD 368 (1176)
Q Consensus 301 ~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~----~L~~L~Ls~N~l~~----~~p~ 368 (1176)
++|++|+|++|++++ .++..+..+++|++|+|++|.+++..+..++..++ +|++|+|++|.++. .++.
T Consensus 28 ~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 107 (461)
T 1z7x_W 28 QQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSS 107 (461)
T ss_dssp TTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHH
Confidence 344444444444432 23445555666666666666665333334444454 57777777776663 3466
Q ss_pred cccCCCCCCEEEccCCcCCCCCCccccC---CCCCCccEEEccCccccCC----CCccccccccCcEEEcCCccccCCCC
Q 046275 369 SLSNLTNLETLDLSSNNLSGAIPHNLCQ---GPRNSLKELFLQNNLLLGS----IPSTLSNCSQLVSLHLSFNYLTGTIP 441 (1176)
Q Consensus 369 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~---~~~~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p 441 (1176)
.+..+++|++|+|++|.+++..+..++. ....+|++|+|++|++++. ++..+..+++|++|++++|++++..+
T Consensus 108 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 187 (461)
T 1z7x_W 108 TLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGV 187 (461)
T ss_dssp HTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHH
T ss_pred HHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHH
Confidence 6667777777777777765433332221 1234577777777777653 24555666777788888777765433
Q ss_pred cccc-----CCCccCeeecccccccCC----CCCCCCCccccceeecccccccCcc-----ccccccCCCCCeeeccccc
Q 046275 442 SSLG-----SLSKLQDLKLWLNQLHGE----IPPELGNIQTLETLFLDFNELTGTL-----PAALSNCTNLNWISLSNNH 507 (1176)
Q Consensus 442 ~~~~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~Ls~N~ 507 (1176)
..+. ..++|++|++++|.+++. ++..+..+++|++|+|++|++++.. +..+..+++|++|++++|+
T Consensus 188 ~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~ 267 (461)
T 1z7x_W 188 RVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECG 267 (461)
T ss_dssp HHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCC
Confidence 3332 255777777777777653 4555666677777777777776432 2223356777777777777
Q ss_pred cCCC----CCccccCCCCCCeEEccCCcccccCCCCCC-----CCCCCCEEEccCCCCcccCChhHHhhcccchhhhccc
Q 046275 508 LGGE----IPTWIGQLSNLAILKLSNNSFYGRIPPELG-----DCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVG 578 (1176)
Q Consensus 508 l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~ 578 (1176)
+++. ++..+..+++|++|+|++|.+.+..+..+. ..++|+.|+|++|.+++.-...+..
T Consensus 268 l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~------------ 335 (461)
T 1z7x_W 268 ITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS------------ 335 (461)
T ss_dssp CCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH------------
T ss_pred CCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH------------
Confidence 7643 566666677777777777777543333222 2257777777777776431111100
Q ss_pred cceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccc
Q 046275 579 KKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGS 658 (1176)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~ 658 (1176)
.+..+.+|++|||++|.+++..+..++.
T Consensus 336 ----------------------------------------------------~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 363 (461)
T 1z7x_W 336 ----------------------------------------------------VLAQNRFLLELQISNNRLEDAGVRELCQ 363 (461)
T ss_dssp ----------------------------------------------------HHHHCSSCCEEECCSSBCHHHHHHHHHH
T ss_pred ----------------------------------------------------HHhhCCCccEEEccCCccccccHHHHHH
Confidence 0112245677777777777655555543
Q ss_pred -----cccceeeeccCccccc----cCCccccCcCcccEEEccCcccccc--------CCCCccccccccccccccc
Q 046275 659 -----MSYLFILNLGHNNLSG----PIPTEVGDLRGLNILDLSSNRLEGT--------IPSSMSSLTLLNEIDLCNN 718 (1176)
Q Consensus 659 -----l~~L~~L~L~~N~l~g----~iP~~~~~L~~L~~L~Ls~N~l~g~--------iP~~l~~l~~L~~l~ls~N 718 (1176)
.++|+.|+|++|++++ .+|..+..+++|++|||++|++++. +|.....|..|..+|++.|
T Consensus 364 ~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~ 440 (461)
T 1z7x_W 364 GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 440 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred HHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccC
Confidence 5577777888877775 6777777777788888888877754 4544444444444444443
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.1e-30 Score=299.15 Aligned_cols=248 Identities=26% Similarity=0.351 Sum_probs=204.4
Q ss_pred CccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEc
Q 046275 302 SLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDL 381 (1176)
Q Consensus 302 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 381 (1176)
+++.++++++.++ .+|..+. ++|++|++++|+++ .++...|..+++|++|+|++|.+++..|..+.++++|++|+|
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCC-EeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 5666666666666 4555443 57777888888877 566556677888888888888888777888888888888888
Q ss_pred cCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCcccc--CCCCccccCCCccCeeeccccc
Q 046275 382 SSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLT--GTIPSSLGSLSKLQDLKLWLNQ 459 (1176)
Q Consensus 382 s~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~ 459 (1176)
++|+++ .+|..++ ++|++|++++|.+++..+..+.++++|++|++++|+++ +..+..+..+++|++|++++|.
T Consensus 108 s~n~l~-~l~~~~~----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~ 182 (330)
T 1xku_A 108 SKNQLK-ELPEKMP----KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN 182 (330)
T ss_dssp CSSCCS-BCCSSCC----TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSC
T ss_pred CCCcCC-ccChhhc----ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCc
Confidence 888887 5666542 57888999999888777778889999999999999986 3677888999999999999999
Q ss_pred ccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCC
Q 046275 460 LHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPE 539 (1176)
Q Consensus 460 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 539 (1176)
++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..+.++..+++|++|+|++|+++ .+|..
T Consensus 183 l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~ 258 (330)
T 1xku_A 183 IT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGG 258 (330)
T ss_dssp CC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTT
T ss_pred cc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChh
Confidence 98 5666654 78999999999999888899999999999999999999888888999999999999999998 88999
Q ss_pred CCCCCCCCEEEccCCCCcccCChh
Q 046275 540 LGDCRSLIWLDLNTNLFNGSIPPA 563 (1176)
Q Consensus 540 ~~~l~~L~~L~L~~N~l~g~ip~~ 563 (1176)
+..+++|++|+|++|++++ +|..
T Consensus 259 l~~l~~L~~L~l~~N~i~~-~~~~ 281 (330)
T 1xku_A 259 LADHKYIQVVYLHNNNISA-IGSN 281 (330)
T ss_dssp TTTCSSCCEEECCSSCCCC-CCTT
T ss_pred hccCCCcCEEECCCCcCCc-cChh
Confidence 9999999999999999984 5543
No 297
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=6e-31 Score=301.70 Aligned_cols=289 Identities=23% Similarity=0.274 Sum_probs=163.8
Q ss_pred CccceeeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhh
Q 046275 218 KNLQFLDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLA 297 (1176)
Q Consensus 218 ~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~ 297 (1176)
.+++.++++++.++.++..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..+
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~------------ 98 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAF------------ 98 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGS------------
T ss_pred ccCCEEECCCCCccccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHh------------
Confidence 356677777777766665542 567777777777776666667777777777777776664333322
Q ss_pred hcCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCC--CCcccccCCCC
Q 046275 298 DLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTG--ALPDSLSNLTN 375 (1176)
Q Consensus 298 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~ 375 (1176)
..+++|++|+|++|+++ .+|..+. ++|++|++++|+++ .+|...|..+++|++|++++|.++. ..+..+..+ +
T Consensus 99 ~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~ 173 (332)
T 2ft3_A 99 SPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-K 173 (332)
T ss_dssp TTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-C
T ss_pred hCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-c
Confidence 22356666666666666 3444433 56777777777776 5565556667777777777776642 455666666 6
Q ss_pred CCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeec
Q 046275 376 LETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKL 455 (1176)
Q Consensus 376 L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 455 (1176)
|+.|++++|++++ +|..+. ++|++|+|++|.+++..+..+.++++|++|+|++|++++..+..+..+
T Consensus 174 L~~L~l~~n~l~~-l~~~~~----~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l-------- 240 (332)
T 2ft3_A 174 LNYLRISEAKLTG-IPKDLP----ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFL-------- 240 (332)
T ss_dssp CSCCBCCSSBCSS-CCSSSC----SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGC--------
T ss_pred cCEEECcCCCCCc-cCcccc----CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCC--------
Confidence 7777777777663 444331 345555555555554444445555555555555555554444444444
Q ss_pred ccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccC------CCCCCeEEccC
Q 046275 456 WLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQ------LSNLAILKLSN 529 (1176)
Q Consensus 456 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~L~~ 529 (1176)
++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..|.. ..+|+.|++++
T Consensus 241 ----------------~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~ 303 (332)
T 2ft3_A 241 ----------------PTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFN 303 (332)
T ss_dssp ----------------TTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCS
T ss_pred ----------------CCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeec
Confidence 44444555555444 44444555555555555555555433333332 24566666666
Q ss_pred Cccc--ccCCCCCCCCCCCCEEEccCCC
Q 046275 530 NSFY--GRIPPELGDCRSLIWLDLNTNL 555 (1176)
Q Consensus 530 N~l~--~~~p~~~~~l~~L~~L~L~~N~ 555 (1176)
|.+. +..|..|..+++|+.+++++|+
T Consensus 304 N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 304 NPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CcccccccCcccccccchhhhhhccccc
Confidence 6655 4455556666666666666653
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=3.9e-34 Score=344.29 Aligned_cols=385 Identities=19% Similarity=0.146 Sum_probs=252.2
Q ss_pred CCCcEEecCCCCCCcccc-ccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCcccccccCCCCCcccee
Q 046275 145 SSLKVLNLSSNLLDFSGR-EAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGDINVSKCKNLQFL 223 (1176)
Q Consensus 145 ~~L~~L~Ls~n~i~~~~~-~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~~~~~~l~~L~~L 223 (1176)
++|++|+|++|+++..+. ..+..+++|++|+|++|++++...-.. ...+..+++|++|
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l---------------------~~~l~~~~~L~~L 61 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDI---------------------SSALRVNPALAEL 61 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHH---------------------HHHHHTCTTCCEE
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHH---------------------HHHHHhCCCcCEE
Confidence 345556666555554442 224445555555555555542100000 1123345566666
Q ss_pred eccCCcccccC-CC-ccCCC----CCcEEEcCCCcCCC----CcChhhhccccCCeEeeccccccCccCCCCccccCcch
Q 046275 224 DVSSNNFSMAV-PS-FGDCL----ALEYLDISANKFTG----DVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIP 293 (1176)
Q Consensus 224 ~Ls~N~l~~~~-~~-l~~l~----~L~~L~Ls~N~l~~----~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~ 293 (1176)
++++|.++... .. ...+. +|++|+|++|++++ .++..+..+++|++|+|++|.+++..+. .+.
T Consensus 62 ~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~-------~l~ 134 (461)
T 1z7x_W 62 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQ-------LLC 134 (461)
T ss_dssp ECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHH-------HHH
T ss_pred eCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHH-------HHH
Confidence 66666654321 11 12222 57777777777764 3466677777777777777776532111 111
Q ss_pred hhhhhcCCCccEEEccCCccccc----CCccccCCCCCcEEEccCCcCcccCCHHHH----hcCCCCCEEEccCcccCCC
Q 046275 294 LHLADLCSSLVKLDLSSNNLSGK----VPSRFGSCSSLESFDISSNKFSGELPIEIF----LSMSNLKELVLSFNDFTGA 365 (1176)
Q Consensus 294 ~~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~----~~l~~L~~L~Ls~N~l~~~ 365 (1176)
..+....++|++|+|++|++++. ++..+..+++|++|++++|.+++..+..+. ...++|++|+|++|.+++.
T Consensus 135 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~ 214 (461)
T 1z7x_W 135 EGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSD 214 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTT
T ss_pred HHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHH
Confidence 12222245688888888877753 355666778888888888887633222221 2356888888888888763
Q ss_pred ----CcccccCCCCCCEEEccCCcCCCCCCccccC---CCCCCccEEEccCccccCC----CCccccccccCcEEEcCCc
Q 046275 366 ----LPDSLSNLTNLETLDLSSNNLSGAIPHNLCQ---GPRNSLKELFLQNNLLLGS----IPSTLSNCSQLVSLHLSFN 434 (1176)
Q Consensus 366 ----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~---~~~~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N 434 (1176)
++..+..+++|++|+|++|.+++.....++. ...++|++|+|++|.+++. ++..+.++++|++|+|++|
T Consensus 215 ~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n 294 (461)
T 1z7x_W 215 NCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGN 294 (461)
T ss_dssp HHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTC
T ss_pred HHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCC
Confidence 4667777888888888888876432211111 2356788999999988864 5677778899999999999
Q ss_pred cccCCCCccccC-----CCccCeeecccccccCC----CCCCCCCccccceeecccccccCcccccccc-----CCCCCe
Q 046275 435 YLTGTIPSSLGS-----LSKLQDLKLWLNQLHGE----IPPELGNIQTLETLFLDFNELTGTLPAALSN-----CTNLNW 500 (1176)
Q Consensus 435 ~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~ 500 (1176)
++++..+..+.. .++|++|++++|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|++
T Consensus 295 ~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~ 374 (461)
T 1z7x_W 295 ELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRV 374 (461)
T ss_dssp CCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCE
T ss_pred CCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEE
Confidence 987544444432 36899999999998865 4666777899999999999998766665553 679999
Q ss_pred eeccccccCC----CCCccccCCCCCCeEEccCCccccc--------CCCCCCCCCCCCEEEccCCCCcccC
Q 046275 501 ISLSNNHLGG----EIPTWIGQLSNLAILKLSNNSFYGR--------IPPELGDCRSLIWLDLNTNLFNGSI 560 (1176)
Q Consensus 501 L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~--------~p~~~~~l~~L~~L~L~~N~l~g~i 560 (1176)
|+|++|++++ .+|..+..+++|++|+|++|++++. +|.. ..+|+.|++.++.+....
T Consensus 375 L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~---~~~L~~L~~~~~~~~~~~ 443 (461)
T 1z7x_W 375 LWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQP---GCLLEQLVLYDIYWSEEM 443 (461)
T ss_dssp EECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTST---TCCCCEEECTTCCCCHHH
T ss_pred EECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccC---CcchhheeecccccCHHH
Confidence 9999999986 7788888999999999999998754 3332 346888888888776433
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=293.71 Aligned_cols=280 Identities=21% Similarity=0.209 Sum_probs=196.6
Q ss_pred CCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCee
Q 046275 374 TNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDL 453 (1176)
Q Consensus 374 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 453 (1176)
+.....++++|.++ .+|..+. ++|++|+|++|++++..+..+.++++|++|+|++|++++..|..|.++++|++|
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~----~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT----EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC----TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCeEeeCCCCCcc-ccccccc----ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 33444566666665 4555432 356677777777665555567777777777777777776666677777777777
Q ss_pred ecccccccCCCCCCCCCccccceeecccccccCccc-cccccCCCCCeeecccc-ccCCCCCccccCCCCCCeEEccCCc
Q 046275 454 KLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLP-AALSNCTNLNWISLSNN-HLGGEIPTWIGQLSNLAILKLSNNS 531 (1176)
Q Consensus 454 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~ 531 (1176)
+|++|++++..+..++++++|++|+|++|++++..+ ..|.++++|++|++++| .+++..|..++.+++|++|++++|+
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 777777775444447777777777777777774433 46777788888888877 4665556677778888888888888
Q ss_pred ccccCCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccc
Q 046275 532 FYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSR 611 (1176)
Q Consensus 532 l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 611 (1176)
+++..|..+..+++|+.|++++|.+. .+|..++.
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~--------------------------------------------- 219 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVD--------------------------------------------- 219 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCST-THHHHHHH---------------------------------------------
T ss_pred cCccCHHHHhccccCCeecCCCCccc-cchhhhhh---------------------------------------------
Confidence 87777888888888888888888774 34433321
Q ss_pred cccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCcccc---ccccceeeeccCccccc----cCCccccCcC
Q 046275 612 ISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIG---SMSYLFILNLGHNNLSG----PIPTEVGDLR 684 (1176)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~---~l~~L~~L~L~~N~l~g----~iP~~~~~L~ 684 (1176)
...+|+.|+|++|++++..+..+. ....++.++|++|.+++ .+|+.++.++
T Consensus 220 ----------------------~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~ 277 (353)
T 2z80_A 220 ----------------------VTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQIS 277 (353)
T ss_dssp ----------------------HTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCT
T ss_pred ----------------------hcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhccc
Confidence 123577788888888876555443 34566677777777665 4788888888
Q ss_pred cccEEEccCccccccCCCCc-cccccccccccccccccCCCCCC
Q 046275 685 GLNILDLSSNRLEGTIPSSM-SSLTLLNEIDLCNNQLTGMIPVM 727 (1176)
Q Consensus 685 ~L~~L~Ls~N~l~g~iP~~l-~~l~~L~~l~ls~N~l~g~~p~~ 727 (1176)
+|++|||++|+|+ .+|..+ ..+++|+.|+|++|++++..|..
T Consensus 278 ~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~~l 320 (353)
T 2z80_A 278 GLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 320 (353)
T ss_dssp TCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHHH
T ss_pred CCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCCCc
Confidence 8888999888888 677764 78888888999999888888743
No 300
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.1e-28 Score=281.70 Aligned_cols=225 Identities=24% Similarity=0.255 Sum_probs=148.5
Q ss_pred ccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeec
Q 046275 424 SQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISL 503 (1176)
Q Consensus 424 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 503 (1176)
++++.|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..|.++++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 34455555555554 44444555555555555555555 45555555555555555555555 44555555555555555
Q ss_pred cccccCCCCCcccc---------CCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhh
Q 046275 504 SNNHLGGEIPTWIG---------QLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAAN 574 (1176)
Q Consensus 504 s~N~l~~~~p~~~~---------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~ 574 (1176)
++|++.+.+|..++ .+++|++|+|++|+++ .+|..++.+++|+.|+|++|++++ +|+.+
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l---------- 225 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAI---------- 225 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGG----------
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhh----------
Confidence 55555555555444 3777777777777776 677777777777777777777763 44321
Q ss_pred hccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCc
Q 046275 575 FIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPK 654 (1176)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~ 654 (1176)
..+.+|++|+|++|++.+.+|.
T Consensus 226 ----------------------------------------------------------~~l~~L~~L~Ls~n~~~~~~p~ 247 (328)
T 4fcg_A 226 ----------------------------------------------------------HHLPKLEELDLRGCTALRNYPP 247 (328)
T ss_dssp ----------------------------------------------------------GGCTTCCEEECTTCTTCCBCCC
T ss_pred ----------------------------------------------------------ccCCCCCEEECcCCcchhhhHH
Confidence 1224577777888777778888
Q ss_pred cccccccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCcccccccccccccccccc
Q 046275 655 EIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLT 721 (1176)
Q Consensus 655 ~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~ 721 (1176)
.++.+++|+.|+|++|++.+.+|..++++++|++|+|++|++.|.+|.++.+|++|+.++++.|.+.
T Consensus 248 ~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 248 IFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred HhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 8888888888888888888888888888888888888888888888888888888888888766554
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.6e-28 Score=276.39 Aligned_cols=237 Identities=25% Similarity=0.255 Sum_probs=169.2
Q ss_pred CCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCC--CcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCcc
Q 046275 326 SLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGA--LPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLK 403 (1176)
Q Consensus 326 ~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~ 403 (1176)
+|++|+|++|+++ .+|..+|..+++|++|+|++|.++.. .+..+..+++|++|+|++|.++ .+|..+ ..+++|+
T Consensus 29 ~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~--~~l~~L~ 104 (306)
T 2z66_A 29 SATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNF--LGLEQLE 104 (306)
T ss_dssp TCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEE--ETCTTCC
T ss_pred CCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhc--CCCCCCC
Confidence 4444444444443 34444444444444444444444311 1333334444444455444444 233333 1234455
Q ss_pred EEEccCccccCCCC-ccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccC-CCCCCCCCccccceeeccc
Q 046275 404 ELFLQNNLLLGSIP-STLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHG-EIPPELGNIQTLETLFLDF 481 (1176)
Q Consensus 404 ~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~ 481 (1176)
+|++++|.+++..+ ..+..+++|++|++++|++++..|..+..+++|++|++++|.+.+ .+|..+..+++|++|+|++
T Consensus 105 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~ 184 (306)
T 2z66_A 105 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 184 (306)
T ss_dssp EEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred EEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCC
Confidence 55555555554333 467778888888888888887788888888888888888888876 5788899999999999999
Q ss_pred ccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCC-CCCCEEEccCCCCcccC
Q 046275 482 NELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDC-RSLIWLDLNTNLFNGSI 560 (1176)
Q Consensus 482 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~g~i 560 (1176)
|++++..|..|.++++|++|+|++|++++..+..+..+++|++|+|++|++++..|..+..+ ++|+.|+|++|+++|..
T Consensus 185 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 185 CQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred CCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 99998888999999999999999999998777789999999999999999999999999998 49999999999999876
Q ss_pred ChhHHh
Q 046275 561 PPALFK 566 (1176)
Q Consensus 561 p~~~~~ 566 (1176)
+...|.
T Consensus 265 ~~~~~~ 270 (306)
T 2z66_A 265 EHQSFL 270 (306)
T ss_dssp GGHHHH
T ss_pred ChHHHH
Confidence 654443
No 302
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1.5e-30 Score=323.50 Aligned_cols=440 Identities=16% Similarity=0.101 Sum_probs=288.8
Q ss_pred ccccccCCCCccEEEeCCCcccccccCCCCCccceeeccCCccc--ccCCCccCCCCCcEEEcCCCcCCCCcChhhhcc-
Q 046275 188 PWILFNGCDELKQLALKGNKVTGDINVSKCKNLQFLDVSSNNFS--MAVPSFGDCLALEYLDISANKFTGDVGHAISAC- 264 (1176)
Q Consensus 188 ~~~~f~~~~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~--~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l- 264 (1176)
+...+..+++|++|+|++|......... + .....+. .+......+++|++|+|++|.+++..+..+...
T Consensus 65 ~~~~~~~~~~L~~L~L~~~~~~~~~~~~--~------~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~ 136 (592)
T 3ogk_B 65 PDRLSRRFPNLRSLKLKGKPRAAMFNLI--P------ENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKAR 136 (592)
T ss_dssp HHHHHHHCTTCSEEEEECSCGGGGGTCS--C------TTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHH
T ss_pred hHHHHHhCCCCeEEEecCCcchhhcccc--c------ccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhc
Confidence 3445666778888888876543211100 0 0001100 011112367788888888888776666666653
Q ss_pred c-cCCeEeecccc-ccCccCCCCccccCcchhhhhhcCCCccEEEccCCccccc----CCccccCCCCCcEEEccCCcCc
Q 046275 265 E-HLSFLNVSSNL-FSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGK----VPSRFGSCSSLESFDISSNKFS 338 (1176)
Q Consensus 265 ~-~L~~L~Ls~N~-l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 338 (1176)
+ +|++|+|++|. ++ + .....+...+++|++|+|++|.+++. ++..+..+++|++|++++|.++
T Consensus 137 ~~~L~~L~L~~~~~~~---~--------~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~ 205 (592)
T 3ogk_B 137 ADDLETLKLDKCSGFT---T--------DGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFA 205 (592)
T ss_dssp GGGCCEEEEESCEEEE---H--------HHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCS
T ss_pred cccCcEEECcCCCCcC---H--------HHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCC
Confidence 3 48888888776 21 0 11122334568888888888887654 3344566788888888888886
Q ss_pred ccCC----HHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCC---CCCCccccCCCCCCccEEEccCcc
Q 046275 339 GELP----IEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLS---GAIPHNLCQGPRNSLKELFLQNNL 411 (1176)
Q Consensus 339 ~~i~----~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~---~~~p~~~~~~~~~~L~~L~L~~N~ 411 (1176)
+ +. ..++.++++|++|++++|.+.+ +|..+.++++|+.|+++.+... +..+..+ ..+++|+.|+++++.
T Consensus 206 ~-~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l--~~~~~L~~L~l~~~~ 281 (592)
T 3ogk_B 206 K-ISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNL--VFPRKLCRLGLSYMG 281 (592)
T ss_dssp S-CCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCC--CCCTTCCEEEETTCC
T ss_pred c-cCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHh--hccccccccCccccc
Confidence 2 22 2334678888888888888874 6677888888888888764322 1122222 345678888888764
Q ss_pred ccCCCCccccccccCcEEEcCCccccCCCC-ccccCCCccCeeecccccccCCCCCCCCCccccceeecc----------
Q 046275 412 LLGSIPSTLSNCSQLVSLHLSFNYLTGTIP-SSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLD---------- 480 (1176)
Q Consensus 412 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~---------- 480 (1176)
. +.+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++++-..+.++..+..+++|++|+|+
T Consensus 282 ~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~ 360 (592)
T 3ogk_B 282 P-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMED 360 (592)
T ss_dssp T-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSS
T ss_pred h-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCcccccccc
Confidence 3 3677788888999999999998764433 346788899999998443333344444667889999998
Q ss_pred -cccccCcc-ccccccCCCCCeeeccccccCCCCCccccC-CCCCCeEEcc----CCccccc-----CCCCCCCCCCCCE
Q 046275 481 -FNELTGTL-PAALSNCTNLNWISLSNNHLGGEIPTWIGQ-LSNLAILKLS----NNSFYGR-----IPPELGDCRSLIW 548 (1176)
Q Consensus 481 -~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~ 548 (1176)
.|.+++.. +..+.++++|++|+++.|++++..+..++. +++|+.|+++ .|.+++. ++..+..+++|+.
T Consensus 361 ~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~ 440 (592)
T 3ogk_B 361 EEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRR 440 (592)
T ss_dssp TTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCE
T ss_pred ccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCE
Confidence 36676443 333556889999999888888777777776 8889999996 6777643 2333566888999
Q ss_pred EEccCCC--CcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCC
Q 046275 549 LDLNTNL--FNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGG 626 (1176)
Q Consensus 549 L~L~~N~--l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 626 (1176)
|+|++|. +++..+..+.
T Consensus 441 L~L~~~~~~l~~~~~~~~~------------------------------------------------------------- 459 (592)
T 3ogk_B 441 FAFYLRQGGLTDLGLSYIG------------------------------------------------------------- 459 (592)
T ss_dssp EEEECCGGGCCHHHHHHHH-------------------------------------------------------------
T ss_pred EEEecCCCCccHHHHHHHH-------------------------------------------------------------
Confidence 9987543 4332111110
Q ss_pred CCCCCcCCCCCccEEEcccCcCcc-CCCccccccccceeeeccCcccccc-CCccccCcCcccEEEccCccccccCCCCc
Q 046275 627 HTQPTFNHNGSMMFLDISYNMLSG-SIPKEIGSMSYLFILNLGHNNLSGP-IPTEVGDLRGLNILDLSSNRLEGTIPSSM 704 (1176)
Q Consensus 627 ~~~~~~~~~~~l~~LdLs~N~l~g-~iP~~~~~l~~L~~L~L~~N~l~g~-iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l 704 (1176)
....+|++|+|++|.+++ .+|..+..+++|+.|+|++|.+++. ++..+..+++|++|+|++|++++.--..+
T Consensus 460 ------~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l 533 (592)
T 3ogk_B 460 ------QYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLM 533 (592)
T ss_dssp ------HSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGG
T ss_pred ------HhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHH
Confidence 112468899999999886 4566678889999999999998755 45556778999999999999886533333
Q ss_pred -cccccccccccccc
Q 046275 705 -SSLTLLNEIDLCNN 718 (1176)
Q Consensus 705 -~~l~~L~~l~ls~N 718 (1176)
..++.+....+..+
T Consensus 534 ~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 534 QMARPYWNIELIPSR 548 (592)
T ss_dssp GGCCTTEEEEEECCC
T ss_pred HHhCCCcEEEEecCc
Confidence 24455544444433
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1.8e-28 Score=277.75 Aligned_cols=174 Identities=24% Similarity=0.305 Sum_probs=84.9
Q ss_pred EEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccC--CCCccccCCCccCeeec
Q 046275 378 TLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTG--TIPSSLGSLSKLQDLKL 455 (1176)
Q Consensus 378 ~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L 455 (1176)
.++++++.++ .+|..+ .++|++|+|++|+++...+..|.++++|++|+|++|+++. ..|..+..+++|++|++
T Consensus 11 ~l~c~~~~l~-~ip~~~----~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGI----PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EEECCSSCCS-SCCSCC----CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred EEEcCCCCcc-cCCCCC----CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 4555555554 444432 1345555555555553333345556666666666666552 22344444555555555
Q ss_pred ccccccCCCCCCCCCccccceeecccccccCccc-cccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccc
Q 046275 456 WLNQLHGEIPPELGNIQTLETLFLDFNELTGTLP-AALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYG 534 (1176)
Q Consensus 456 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 534 (1176)
++|.+. .+|..+..+++|++|++++|++++..+ ..+.++++|++|++++|++++..|..+..+++|++|+|++|.+.+
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 555554 334444445555555555555543332 344444455555555555444444444444555555555554443
Q ss_pred -cCCCCCCCCCCCCEEEccCCCCc
Q 046275 535 -RIPPELGDCRSLIWLDLNTNLFN 557 (1176)
Q Consensus 535 -~~p~~~~~l~~L~~L~L~~N~l~ 557 (1176)
.+|..+..+++|+.|+|++|.++
T Consensus 165 ~~~~~~~~~l~~L~~L~Ls~n~l~ 188 (306)
T 2z66_A 165 NFLPDIFTELRNLTFLDLSQCQLE 188 (306)
T ss_dssp GEECSCCTTCTTCCEEECTTSCCC
T ss_pred ccchhHHhhCcCCCEEECCCCCcC
Confidence 34444444444444444444444
No 304
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.7e-29 Score=286.66 Aligned_cols=246 Identities=26% Similarity=0.253 Sum_probs=200.5
Q ss_pred CccEEEccCccccCCCCccccccccCcEEEcCCcccc-CCCCcccc-------CCCccCeeecccccccCCCCCCC--CC
Q 046275 401 SLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLT-GTIPSSLG-------SLSKLQDLKLWLNQLHGEIPPEL--GN 470 (1176)
Q Consensus 401 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~--~~ 470 (1176)
+|++|++++|.+ .+|..+... |+.|+|++|+++ ..+|..+. ++++|++|+|++|++++.+|..+ +.
T Consensus 44 ~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 119 (312)
T 1wwl_A 44 SLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEAT 119 (312)
T ss_dssp ECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCC
T ss_pred CceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhc
Confidence 455566666666 455544433 777888888884 45666665 78889999999999988888876 88
Q ss_pred ccccceeecccccccCccccccccC-----CCCCeeeccccccCCCCCccccCCCCCCeEEccCCccccc--CCCCC--C
Q 046275 471 IQTLETLFLDFNELTGTLPAALSNC-----TNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGR--IPPEL--G 541 (1176)
Q Consensus 471 l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~--~ 541 (1176)
+++|++|+|++|++++. |..+.++ ++|++|+|++|++++..|..|+.+++|++|+|++|++.|. +|..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 99999999999999976 8888877 8999999999999988889999999999999999998765 34444 8
Q ss_pred CCCCCCEEEccCCCCcc--cCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCc
Q 046275 542 DCRSLIWLDLNTNLFNG--SIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCN 619 (1176)
Q Consensus 542 ~l~~L~~L~L~~N~l~g--~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 619 (1176)
.+++|++|+|++|++++ .+|..+|
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~------------------------------------------------------ 224 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALA------------------------------------------------------ 224 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHH------------------------------------------------------
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHH------------------------------------------------------
Confidence 89999999999999873 2222221
Q ss_pred cccccCCCCCCCcCCCCCccEEEcccCcCccCCC-ccccccccceeeeccCccccccCCccccCcCcccEEEccCccccc
Q 046275 620 FTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIP-KEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEG 698 (1176)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP-~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g 698 (1176)
..+.+|++|||++|++++.+| ..+..+++|+.|+|++|+|+ .+|..+. ++|++|||++|+|++
T Consensus 225 -------------~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~ 288 (312)
T 1wwl_A 225 -------------AARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDR 288 (312)
T ss_dssp -------------HTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCS
T ss_pred -------------hcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCC
Confidence 123568999999999999886 56677999999999999999 8999888 899999999999996
Q ss_pred cCCCCccccccccccccccccccCC
Q 046275 699 TIPSSMSSLTLLNEIDLCNNQLTGM 723 (1176)
Q Consensus 699 ~iP~~l~~l~~L~~l~ls~N~l~g~ 723 (1176)
. |. +..+++|+.|+|++|++++.
T Consensus 289 ~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 289 N-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp C-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred C-hh-HhhCCCCCEEeccCCCCCCC
Confidence 5 77 99999999999999999874
No 305
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=5.2e-28 Score=275.98 Aligned_cols=234 Identities=21% Similarity=0.277 Sum_probs=164.9
Q ss_pred CCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCee
Q 046275 374 TNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDL 453 (1176)
Q Consensus 374 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 453 (1176)
+.++.|+|++|.++ .+|..++. +++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++++++|++|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~--l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFR--LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGG--GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cceeEEEccCCCch-hcChhhhh--CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 55667777777666 55555532 456666666666666 55666666666666666666666 556666666666666
Q ss_pred ecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCccc
Q 046275 454 KLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFY 533 (1176)
Q Consensus 454 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 533 (1176)
+|++|++.+.+|..++.. ..+..|.++++|++|+|++|+++ .+|..++.+++|++|+|++|+++
T Consensus 156 ~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 156 SIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EEEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred ECCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 666666555555554430 11223445778888888888877 67777888888888888888887
Q ss_pred ccCCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccc
Q 046275 534 GRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRIS 613 (1176)
Q Consensus 534 ~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 613 (1176)
.+|..++.+++|+.|+|++|++.+.+|..+
T Consensus 220 -~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~------------------------------------------------- 249 (328)
T 4fcg_A 220 -ALGPAIHHLPKLEELDLRGCTALRNYPPIF------------------------------------------------- 249 (328)
T ss_dssp -CCCGGGGGCTTCCEEECTTCTTCCBCCCCT-------------------------------------------------
T ss_pred -cCchhhccCCCCCEEECcCCcchhhhHHHh-------------------------------------------------
Confidence 466677778888888888887777665422
Q ss_pred cCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccC
Q 046275 614 TRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSS 693 (1176)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~ 693 (1176)
..+.+|++|+|++|++.+.+|..++++++|+.|+|++|++.|.+|+.+++|++|+.++++.
T Consensus 250 -------------------~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~ 310 (328)
T 4fcg_A 250 -------------------GGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPP 310 (328)
T ss_dssp -------------------TCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCG
T ss_pred -------------------cCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCH
Confidence 2234677888888888888888888899999999999999889999999999999999888
Q ss_pred cccc
Q 046275 694 NRLE 697 (1176)
Q Consensus 694 N~l~ 697 (1176)
|.+.
T Consensus 311 ~~~~ 314 (328)
T 4fcg_A 311 HLQA 314 (328)
T ss_dssp GGSC
T ss_pred HHHH
Confidence 8776
No 306
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.9e-27 Score=284.63 Aligned_cols=227 Identities=21% Similarity=0.148 Sum_probs=135.2
Q ss_pred cCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeecc
Q 046275 425 QLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLS 504 (1176)
Q Consensus 425 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 504 (1176)
+|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 44444444444444444444555555555555555554444555555555555555555554444455555555555555
Q ss_pred ccccCCCCCccccCCCCCCeEEccCCcccccCC-CCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceee
Q 046275 505 NNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP-PELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVY 583 (1176)
Q Consensus 505 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~ 583 (1176)
+|+++...+..|..+++|++|+|++|+..+.+| ..|.++++|+.|+|++|++++ +|.
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~--------------------- 213 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPN--------------------- 213 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCC---------------------
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-ccc---------------------
Confidence 555554444455556666666666533222333 346666666666666666652 221
Q ss_pred eecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccce
Q 046275 584 IKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLF 663 (1176)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~ 663 (1176)
+..+.+|++|||++|+|++..|..|+++++|+
T Consensus 214 ------------------------------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 245 (452)
T 3zyi_A 214 ------------------------------------------------LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLK 245 (452)
T ss_dssp ------------------------------------------------CTTCTTCCEEECTTSCCSEECGGGGTTCTTCC
T ss_pred ------------------------------------------------ccccccccEEECcCCcCcccCcccccCccCCC
Confidence 12234566777777777776677777777777
Q ss_pred eeeccCccccccCCccccCcCcccEEEccCccccccCCCCcccccccccccccccccc
Q 046275 664 ILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLT 721 (1176)
Q Consensus 664 ~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~ 721 (1176)
.|+|++|++++..|..|+.+++|+.|||++|+|++..|..+..+++|+.|+|++|++.
T Consensus 246 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 246 KLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred EEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 7777777777666777777777777777777777555566677777777777777765
No 307
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.5e-28 Score=282.43 Aligned_cols=282 Identities=22% Similarity=0.213 Sum_probs=184.2
Q ss_pred cCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccC
Q 046275 238 GDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKV 317 (1176)
Q Consensus 238 ~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 317 (1176)
..|+.....++++|.++.+ |..+. ++|++|++++|.+++..+. .+..+++|++|+|++|++++..
T Consensus 28 ~~C~~~~~c~~~~~~l~~i-P~~~~--~~L~~L~l~~n~i~~~~~~------------~~~~l~~L~~L~L~~n~l~~~~ 92 (353)
T 2z80_A 28 LSCDRNGICKGSSGSLNSI-PSGLT--EAVKSLDLSNNRITYISNS------------DLQRCVNLQALVLTSNGINTIE 92 (353)
T ss_dssp CEECTTSEEECCSTTCSSC-CTTCC--TTCCEEECTTSCCCEECTT------------TTTTCTTCCEEECTTSCCCEEC
T ss_pred CCCCCCeEeeCCCCCcccc-ccccc--ccCcEEECCCCcCcccCHH------------HhccCCCCCEEECCCCccCccC
Confidence 3455556678888888854 43333 4788888888887743332 2334577888888888888777
Q ss_pred CccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCc-ccccCCCCCCEEEccCCc-CCCCCCcccc
Q 046275 318 PSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALP-DSLSNLTNLETLDLSSNN-LSGAIPHNLC 395 (1176)
Q Consensus 318 p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~ 395 (1176)
|..|.++++|++|++++|+++ .+|...|..+++|++|+|++|.+++..+ ..+.++++|++|++++|. +++..+..+
T Consensus 93 ~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~- 170 (353)
T 2z80_A 93 EDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDF- 170 (353)
T ss_dssp TTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTT-
T ss_pred HhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHc-
Confidence 777888888888888888887 6777777778888888888888874333 367777777777777774 442222222
Q ss_pred CCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccc
Q 046275 396 QGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLE 475 (1176)
Q Consensus 396 ~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 475 (1176)
..+++|++|++++|.+++..|..+.++++|++|++++|+++. +|. ..+..+++|+
T Consensus 171 -~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~-~~~-----------------------~~~~~~~~L~ 225 (353)
T 2z80_A 171 -AGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL-LLE-----------------------IFVDVTSSVE 225 (353)
T ss_dssp -TTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTT-HHH-----------------------HHHHHTTTEE
T ss_pred -cCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcccc-chh-----------------------hhhhhccccc
Confidence 223445555555555554444555555555555555555442 222 1222344555
Q ss_pred eeecccccccCccccccc---cCCCCCeeeccccccCC----CCCccccCCCCCCeEEccCCcccccCCCC-CCCCCCCC
Q 046275 476 TLFLDFNELTGTLPAALS---NCTNLNWISLSNNHLGG----EIPTWIGQLSNLAILKLSNNSFYGRIPPE-LGDCRSLI 547 (1176)
Q Consensus 476 ~L~L~~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~ 547 (1176)
+|+|++|++++..+..+. ....++.++|++|.+++ .+|.++..+++|++|+|++|+++ .+|.. |..+++|+
T Consensus 226 ~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~ 304 (353)
T 2z80_A 226 CLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQ 304 (353)
T ss_dssp EEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCC
T ss_pred EEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCC
Confidence 555555555543333222 34556666666666654 47888999999999999999998 66766 58999999
Q ss_pred EEEccCCCCcccCCh
Q 046275 548 WLDLNTNLFNGSIPP 562 (1176)
Q Consensus 548 ~L~L~~N~l~g~ip~ 562 (1176)
.|+|++|+++|.+|.
T Consensus 305 ~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 305 KIWLHTNPWDCSCPR 319 (353)
T ss_dssp EEECCSSCBCCCHHH
T ss_pred EEEeeCCCccCcCCC
Confidence 999999999998873
No 308
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.5e-27 Score=282.57 Aligned_cols=247 Identities=21% Similarity=0.187 Sum_probs=141.5
Q ss_pred CCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeec
Q 046275 376 LETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKL 455 (1176)
Q Consensus 376 L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 455 (1176)
.+.++.+++.++ .+|..+ .++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 45 ~~~v~c~~~~l~-~iP~~~----~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGI----STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp SCEEECCSCCCS-SCCSCC----CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCEEEeCCCCcC-cCCCCC----CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 455666666665 455433 234555555555555444455555555555555555555444444554555555554
Q ss_pred ccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCccccc
Q 046275 456 WLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGR 535 (1176)
Q Consensus 456 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 535 (1176)
++|+|++..+..|.++++|++|+|++|+++...+..|..+++|++|+|++|+..+.
T Consensus 120 ------------------------~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~ 175 (440)
T 3zyj_A 120 ------------------------FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY 175 (440)
T ss_dssp ------------------------CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCE
T ss_pred ------------------------CCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcce
Confidence 44444444444455555555555555555544444555555555555555332223
Q ss_pred CC-CCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhcccccc
Q 046275 536 IP-PELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRIST 614 (1176)
Q Consensus 536 ~p-~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 614 (1176)
+| ..|.++++|+.|+|++|.++ .+|.
T Consensus 176 i~~~~~~~l~~L~~L~L~~n~l~-~~~~---------------------------------------------------- 202 (440)
T 3zyj_A 176 ISEGAFEGLSNLRYLNLAMCNLR-EIPN---------------------------------------------------- 202 (440)
T ss_dssp ECTTTTTTCSSCCEEECTTSCCS-SCCC----------------------------------------------------
T ss_pred eCcchhhcccccCeecCCCCcCc-cccc----------------------------------------------------
Confidence 32 34556666666666666554 2221
Q ss_pred CCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCc
Q 046275 615 RSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSN 694 (1176)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N 694 (1176)
+..+.+|++|||++|+|++..|..|.++++|+.|+|++|++++..|..|+++++|+.|||++|
T Consensus 203 -----------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 265 (440)
T 3zyj_A 203 -----------------LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHN 265 (440)
T ss_dssp -----------------CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTS
T ss_pred -----------------cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCC
Confidence 112235666777777777666777777777777777777777666677777777777777777
Q ss_pred cccccCCCCcccccccccccccccccc
Q 046275 695 RLEGTIPSSMSSLTLLNEIDLCNNQLT 721 (1176)
Q Consensus 695 ~l~g~iP~~l~~l~~L~~l~ls~N~l~ 721 (1176)
+|++..|..+..+++|+.|+|++|++.
T Consensus 266 ~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 266 NLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCCccChhHhccccCCCEEEcCCCCcc
Confidence 777555556677777777777777764
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.1e-27 Score=268.11 Aligned_cols=231 Identities=26% Similarity=0.272 Sum_probs=162.2
Q ss_pred cEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccC
Q 046275 304 VKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSS 383 (1176)
Q Consensus 304 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 383 (1176)
+.++.+++.++ .+|..+ .++|++|++++|.++ .++...|..+++|++|+|++|.+++..|..+.++++|++|+|++
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCC-ccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 45666666665 334332 245666666666665 44444455555666666666655555455555555555555555
Q ss_pred CcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCC
Q 046275 384 NNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGE 463 (1176)
Q Consensus 384 N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 463 (1176)
|.. ++...|..+..+++|++|++++|++++..|..+..+++|++|++++|++++.
T Consensus 90 n~~-------------------------l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 144 (285)
T 1ozn_A 90 NAQ-------------------------LRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQAL 144 (285)
T ss_dssp CTT-------------------------CCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCC-------------------------ccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccccc
Confidence 541 3333355666677777777777777766677777777888888888887766
Q ss_pred CCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCC
Q 046275 464 IPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDC 543 (1176)
Q Consensus 464 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 543 (1176)
.+..++.+++|++|+|++|++++..+..|.++++|++|+|++|++++..|.++..+++|++|+|++|++++..+..+..+
T Consensus 145 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 224 (285)
T 1ozn_A 145 PDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPL 224 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTC
T ss_pred CHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccC
Confidence 66667888888888888888886666678888888888888888888778888888888888888888886655668888
Q ss_pred CCCCEEEccCCCCcccCChh
Q 046275 544 RSLIWLDLNTNLFNGSIPPA 563 (1176)
Q Consensus 544 ~~L~~L~L~~N~l~g~ip~~ 563 (1176)
++|+.|+|++|++.+..+..
T Consensus 225 ~~L~~L~l~~N~~~c~~~~~ 244 (285)
T 1ozn_A 225 RALQYLRLNDNPWVCDCRAR 244 (285)
T ss_dssp TTCCEEECCSSCEECSGGGH
T ss_pred cccCEEeccCCCccCCCCcH
Confidence 89999999999988766543
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.2e-27 Score=265.76 Aligned_cols=233 Identities=22% Similarity=0.190 Sum_probs=118.3
Q ss_pred cCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeeccccc-ccCccccccccCCCCCeeec
Q 046275 425 QLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNE-LTGTLPAALSNCTNLNWISL 503 (1176)
Q Consensus 425 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L 503 (1176)
+|++|++++|++++..+..|..+++|++|++++|.+++..|..|.++++|++|+|++|+ ++...|..|.++++|++|++
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 34444444444443333334444444444444444443334444444444444444444 44333444555555555555
Q ss_pred cccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceee
Q 046275 504 SNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVY 583 (1176)
Q Consensus 504 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~ 583 (1176)
++|++++..|..+..+++|++|+|++|++++..+..+..+++|+.|+|++|++++ +|+..
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~------------------- 172 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VPERA------------------- 172 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE-ECTTT-------------------
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccc-cCHHH-------------------
Confidence 5555554444555555555555555555554444445555555555555555542 11110
Q ss_pred eecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccce
Q 046275 584 IKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLF 663 (1176)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~ 663 (1176)
|..+.+|++|+|++|++++..|..|+++++|+
T Consensus 173 ------------------------------------------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 204 (285)
T 1ozn_A 173 ------------------------------------------------FRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLM 204 (285)
T ss_dssp ------------------------------------------------TTTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred ------------------------------------------------hcCccccCEEECCCCcccccCHhHccCccccc
Confidence 11223455566666666655566666666666
Q ss_pred eeeccCccccccCCccccCcCcccEEEccCccccccCCCCccccccccccccccccccCCCCC
Q 046275 664 ILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLTGMIPV 726 (1176)
Q Consensus 664 ~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~g~~p~ 726 (1176)
.|+|++|++++..|..++.+++|++|+|++|++....+.. .-+..++.+..+.|.+.+..|.
T Consensus 205 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 205 TLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp EEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESG
T ss_pred EeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCch
Confidence 6666666666544455666666666666666666433321 2223455556666666666664
No 311
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.2e-26 Score=284.61 Aligned_cols=268 Identities=28% Similarity=0.331 Sum_probs=158.7
Q ss_pred CCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEE
Q 046275 326 SLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKEL 405 (1176)
Q Consensus 326 ~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L 405 (1176)
+++.|++++|.++ .+|..++ ++|++|+|++|.|+ .+|. .+++|++|+|++|+++ .+|. .+++|++|
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~---~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~-----~l~~L~~L 106 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV-----LPPGLLEL 106 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC---TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC-----CCTTCCEE
T ss_pred CCcEEEecCCCcC-ccChhhC---CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC-----CCCCCCEE
Confidence 4777888888877 7776543 67788888888777 4454 4577777777777776 4554 24567777
Q ss_pred EccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeeccccccc
Q 046275 406 FLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELT 485 (1176)
Q Consensus 406 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 485 (1176)
+|++|.+++ +|. .+++|+.|++++|++++ +|.. +++|++|+|++|++++ +|.. +.+|+.|++++|+|+
T Consensus 107 ~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~ 174 (622)
T 3g06_A 107 SIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLT 174 (622)
T ss_dssp EECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS
T ss_pred ECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCCc---cCCCCEEECCCCCCC
Confidence 777777764 333 45667777777777763 4443 3566666666666663 3332 345666666666666
Q ss_pred CccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHH
Q 046275 486 GTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALF 565 (1176)
Q Consensus 486 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~ 565 (1176)
+ +| ..+++|+.|++++|+|++ +|.. +++|+.|++++|.++ .+|.. +++|+.|+|++|++++ +|.
T Consensus 175 ~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp~--- 238 (622)
T 3g06_A 175 S-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LPV--- 238 (622)
T ss_dssp C-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CCC---
T ss_pred C-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CCC---
Confidence 3 34 334566666666666663 3332 355666666666665 34432 2456666666665553 220
Q ss_pred hhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEccc
Q 046275 566 KQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISY 645 (1176)
Q Consensus 566 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~ 645 (1176)
...+|+.|+|++
T Consensus 239 --------------------------------------------------------------------~l~~L~~L~Ls~ 250 (622)
T 3g06_A 239 --------------------------------------------------------------------LPSELKELMVSG 250 (622)
T ss_dssp --------------------------------------------------------------------CCTTCCEEECCS
T ss_pred --------------------------------------------------------------------CCCcCcEEECCC
Confidence 012355566666
Q ss_pred CcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCccccc
Q 046275 646 NMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLT 708 (1176)
Q Consensus 646 N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~ 708 (1176)
|+|+ .+|. .+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+++|.+|..+..++
T Consensus 251 N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 251 NRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp SCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 6665 3444 3455556666666666 5555566666666666666666655555554443
No 312
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.3e-26 Score=284.07 Aligned_cols=268 Identities=26% Similarity=0.316 Sum_probs=200.4
Q ss_pred CccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEc
Q 046275 302 SLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDL 381 (1176)
Q Consensus 302 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 381 (1176)
+++.|++++|.++ .+|..+. ++|++|+|++|.|+ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC----CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC----cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 4667777777776 5555554 67777777777776 5664 4567777777777776 3444 5577777777
Q ss_pred cCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeeccccccc
Q 046275 382 SSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLH 461 (1176)
Q Consensus 382 s~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 461 (1176)
++|++++ +|. .+++|+.|++++|++++ +|.. +++|++|+|++|++++ +|. .+++|+.|++++|.++
T Consensus 109 s~N~l~~-l~~-----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~ 174 (622)
T 3g06_A 109 FSNPLTH-LPA-----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLT 174 (622)
T ss_dssp CSCCCCC-CCC-----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS
T ss_pred cCCcCCC-CCC-----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCC
Confidence 7777763 443 23567777777777774 4443 3778888888888874 444 2457888888888888
Q ss_pred CCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCC
Q 046275 462 GEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 541 (1176)
Q Consensus 462 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 541 (1176)
+ +| ..+++|+.|+|++|+|++ +|.. +++|+.|++++|.++ .+|.. +++|++|+|++|++++ +| .
T Consensus 175 ~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~ 238 (622)
T 3g06_A 175 S-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---V 238 (622)
T ss_dssp C-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---C
T ss_pred C-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---C
Confidence 4 55 446788889999999885 4443 478999999999998 56643 5789999999999985 66 4
Q ss_pred CCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccc
Q 046275 542 DCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFT 621 (1176)
Q Consensus 542 ~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 621 (1176)
.+++|+.|+|++|+++ .+|.
T Consensus 239 ~l~~L~~L~Ls~N~L~-~lp~----------------------------------------------------------- 258 (622)
T 3g06_A 239 LPSELKELMVSGNRLT-SLPM----------------------------------------------------------- 258 (622)
T ss_dssp CCTTCCEEECCSSCCS-CCCC-----------------------------------------------------------
T ss_pred CCCcCcEEECCCCCCC-cCCc-----------------------------------------------------------
Confidence 5689999999999987 3543
Q ss_pred cccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcC
Q 046275 622 RVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLR 684 (1176)
Q Consensus 622 ~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~ 684 (1176)
...+|+.|+|++|+|+ .+|..|+++++|+.|+|++|.++|.+|..+..++
T Consensus 259 ------------~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 259 ------------LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp ------------CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ------------ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 1135889999999999 8899999999999999999999999999888776
No 313
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.5e-28 Score=279.57 Aligned_cols=267 Identities=22% Similarity=0.185 Sum_probs=167.2
Q ss_pred CcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEEE
Q 046275 327 LESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELF 406 (1176)
Q Consensus 327 L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~ 406 (1176)
++.++++.+.+. ..+..++..+++|++|+|++|.+++..|..+.++++|++|+|++|++++..+
T Consensus 12 l~i~~ls~~~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--------------- 75 (317)
T 3o53_A 12 YKIEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--------------- 75 (317)
T ss_dssp EEEESCCTTTHH-HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE---------------
T ss_pred eeEeeccccchh-hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh---------------
Confidence 445566666665 5555666666677777777777776666667777777777777776653221
Q ss_pred ccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccC
Q 046275 407 LQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTG 486 (1176)
Q Consensus 407 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 486 (1176)
+..+++|++|+|++|++++. | ..++|++|++++|++++..+.. +++|++|+|++|++++
T Consensus 76 -------------~~~l~~L~~L~Ls~n~l~~l-~----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~ 134 (317)
T 3o53_A 76 -------------LESLSTLRTLDLNNNYVQEL-L----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITM 134 (317)
T ss_dssp -------------ETTCTTCCEEECCSSEEEEE-E----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCS
T ss_pred -------------hhhcCCCCEEECcCCccccc-c----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCC
Confidence 33344455555555554421 1 1134444444444444332222 2345555555555555
Q ss_pred ccccccccCCCCCeeeccccccCCCCCcccc-CCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHH
Q 046275 487 TLPAALSNCTNLNWISLSNNHLGGEIPTWIG-QLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALF 565 (1176)
Q Consensus 487 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~ 565 (1176)
..|..+.++++|++|+|++|++++..|..+. .+++|++|+|++|++++. |. ...
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~----------------------- 189 (317)
T 3o53_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVV----------------------- 189 (317)
T ss_dssp GGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCC-----------------------
T ss_pred ccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccc-----------------------
Confidence 5455555555555555555555544444332 344444444444444321 11 111
Q ss_pred hhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEccc
Q 046275 566 KQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISY 645 (1176)
Q Consensus 566 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~ 645 (1176)
+.+|++|||++
T Consensus 190 ---------------------------------------------------------------------l~~L~~L~Ls~ 200 (317)
T 3o53_A 190 ---------------------------------------------------------------------FAKLKTLDLSS 200 (317)
T ss_dssp ---------------------------------------------------------------------CTTCCEEECCS
T ss_pred ---------------------------------------------------------------------cccCCEEECCC
Confidence 23466777777
Q ss_pred CcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCcccc-ccCCCCccccccccccccc-cccccCC
Q 046275 646 NMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLE-GTIPSSMSSLTLLNEIDLC-NNQLTGM 723 (1176)
Q Consensus 646 N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~-g~iP~~l~~l~~L~~l~ls-~N~l~g~ 723 (1176)
|++++ +|..++.+++|+.|+|++|+++ .+|..++.+++|+.|+|++|+++ +.+|..+..++.|+.++++ .+.++|.
T Consensus 201 N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~ 278 (317)
T 3o53_A 201 NKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQ 278 (317)
T ss_dssp SCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSS
T ss_pred CcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCC
Confidence 77774 4556888889999999999999 68889999999999999999999 8899999999999999999 6688888
Q ss_pred CCC
Q 046275 724 IPV 726 (1176)
Q Consensus 724 ~p~ 726 (1176)
.|.
T Consensus 279 ~~~ 281 (317)
T 3o53_A 279 NEE 281 (317)
T ss_dssp SSC
T ss_pred chh
Confidence 775
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1e-26 Score=277.32 Aligned_cols=257 Identities=21% Similarity=0.213 Sum_probs=188.4
Q ss_pred cCCeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHH
Q 046275 266 HLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEI 345 (1176)
Q Consensus 266 ~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~ 345 (1176)
..+.++.+++.++ .+|..+ .++++.|+|++|++++..+..|.++++|++|+|++|.++ .++...
T Consensus 44 ~~~~v~c~~~~l~------------~iP~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~ 107 (440)
T 3zyj_A 44 QFSKVICVRKNLR------------EVPDGI---STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-TIEIGA 107 (440)
T ss_dssp TSCEEECCSCCCS------------SCCSCC---CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCC-EECGGG
T ss_pred CCCEEEeCCCCcC------------cCCCCC---CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCC-ccChhh
Confidence 3566777776665 222222 146777777777777666667777777777777777776 555556
Q ss_pred HhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCcccccccc
Q 046275 346 FLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQ 425 (1176)
Q Consensus 346 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~ 425 (1176)
|.++++|++|+|++|+++...+..|..+++|++|+|++|+++ +..+..|.++++
T Consensus 108 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~--------------------------~~~~~~~~~l~~ 161 (440)
T 3zyj_A 108 FNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE--------------------------SIPSYAFNRIPS 161 (440)
T ss_dssp GTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCC--------------------------EECTTTTTTCTT
T ss_pred ccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCccc--------------------------ccCHHHhhhCcc
Confidence 667777777777777776555556666666666666666665 233345556667
Q ss_pred CcEEEcCCc-cccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeecc
Q 046275 426 LVSLHLSFN-YLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLS 504 (1176)
Q Consensus 426 L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 504 (1176)
|++|+|++| .+....+..|..+++|++|+|++|+++ .+| .+..+++|++|+|++|+|++..|..|.++++|+.|+|+
T Consensus 162 L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 239 (440)
T 3zyj_A 162 LRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMI 239 (440)
T ss_dssp CCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred cCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECC
Confidence 777777763 344333346677777777777777777 445 47788889999999999998888999999999999999
Q ss_pred ccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHh
Q 046275 505 NNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFK 566 (1176)
Q Consensus 505 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~ 566 (1176)
+|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++.+...-.+|.
T Consensus 240 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~~l~ 301 (440)
T 3zyj_A 240 QSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLS 301 (440)
T ss_dssp TCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTTHHHH
T ss_pred CCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCchHHH
Confidence 99999888889999999999999999999777778899999999999999999877655543
No 315
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.2e-26 Score=277.62 Aligned_cols=237 Identities=20% Similarity=0.210 Sum_probs=174.6
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEE
Q 046275 301 SSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLD 380 (1176)
Q Consensus 301 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 380 (1176)
+++++|+|++|++++..|..|.++++|++|+|++|+++ .++...|.++++|++|+|++|.+++..+..|.++++|++|+
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccC-CcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 45666666666666555666666666666666666665 34444455566666666666666644444555555555555
Q ss_pred ccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCc-cccCCCCccccCCCccCeeeccccc
Q 046275 381 LSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFN-YLTGTIPSSLGSLSKLQDLKLWLNQ 459 (1176)
Q Consensus 381 Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~ 459 (1176)
|++|+++ +..+..|.++++|+.|++++| .+....+..|..+++|++|+|++|+
T Consensus 154 L~~N~l~--------------------------~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~ 207 (452)
T 3zyi_A 154 LRNNPIE--------------------------SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCN 207 (452)
T ss_dssp CCSCCCC--------------------------EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCCCcc--------------------------eeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCc
Confidence 5555554 333445666777777777773 4443334467778888888888888
Q ss_pred ccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCC
Q 046275 460 LHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPE 539 (1176)
Q Consensus 460 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 539 (1176)
+++ +| .+..+++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|..|..+++|++|+|++|++++..+..
T Consensus 208 l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 285 (452)
T 3zyi_A 208 IKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDL 285 (452)
T ss_dssp CSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTS
T ss_pred ccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHH
Confidence 874 34 4788899999999999999888999999999999999999999888999999999999999999999777778
Q ss_pred CCCCCCCCEEEccCCCCcccCChhHHh
Q 046275 540 LGDCRSLIWLDLNTNLFNGSIPPALFK 566 (1176)
Q Consensus 540 ~~~l~~L~~L~L~~N~l~g~ip~~~~~ 566 (1176)
+..+++|+.|+|++|++.+.+.-.++.
T Consensus 286 ~~~l~~L~~L~L~~Np~~CdC~~~~l~ 312 (452)
T 3zyi_A 286 FTPLRYLVELHLHHNPWNCDCDILWLA 312 (452)
T ss_dssp STTCTTCCEEECCSSCEECSTTTHHHH
T ss_pred hccccCCCEEEccCCCcCCCCCchHHH
Confidence 899999999999999999877655543
No 316
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=6.7e-29 Score=281.72 Aligned_cols=204 Identities=22% Similarity=0.221 Sum_probs=129.0
Q ss_pred ccccCcEEEcCCccccCCCCccc--cCCCccCeeecccccccCCCCCCCCCc-----cccceeecccccccCcccccccc
Q 046275 422 NCSQLVSLHLSFNYLTGTIPSSL--GSLSKLQDLKLWLNQLHGEIPPELGNI-----QTLETLFLDFNELTGTLPAALSN 494 (1176)
Q Consensus 422 ~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~ 494 (1176)
++++|++|+|++|++++.+|..+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|++
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 45555666666666655555544 5556666666666666544 5555555 56666666666666555566666
Q ss_pred CCCCCeeeccccccCCC--CCccc--cCCCCCCeEEccCCcccc--cCC-CCCCCCCCCCEEEccCCCCcccCChhHHhh
Q 046275 495 CTNLNWISLSNNHLGGE--IPTWI--GQLSNLAILKLSNNSFYG--RIP-PELGDCRSLIWLDLNTNLFNGSIPPALFKQ 567 (1176)
Q Consensus 495 l~~L~~L~Ls~N~l~~~--~p~~~--~~l~~L~~L~L~~N~l~~--~~p-~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~ 567 (1176)
+++|++|+|++|++.+. +|..+ +.+++|++|+|++|++++ .++ ..+..+++|+.|+|++|++++.+|...
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~--- 248 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPS--- 248 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSC---
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhh---
Confidence 66666666666665543 22333 566667777777776652 122 223456677777777777765443111
Q ss_pred cccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCc
Q 046275 568 SGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNM 647 (1176)
Q Consensus 568 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~ 647 (1176)
+..+.+|++|||++|+
T Consensus 249 ----------------------------------------------------------------~~~l~~L~~L~Ls~N~ 264 (312)
T 1wwl_A 249 ----------------------------------------------------------------CDWPSQLNSLNLSFTG 264 (312)
T ss_dssp ----------------------------------------------------------------CCCCTTCCEEECTTSC
T ss_pred ----------------------------------------------------------------hhhcCCCCEEECCCCc
Confidence 1123457778888888
Q ss_pred CccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccc
Q 046275 648 LSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEG 698 (1176)
Q Consensus 648 l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g 698 (1176)
|+ .+|..+. ++|+.|+|++|+|++. |. ++.+++|++|+|++|+|++
T Consensus 265 l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 265 LK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 87 6777776 7888888888888854 66 8888888888888888875
No 317
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.94 E-value=3.4e-29 Score=311.36 Aligned_cols=465 Identities=16% Similarity=0.092 Sum_probs=256.3
Q ss_pred cccccccccCCCcEEEccCCCC-CCCCccccc-----------cccCCCCccEEEeCCCcccccccCCCCCccceeeccC
Q 046275 160 SGREAGSLKLSLEVLDLSYNKI-SGANVVPWI-----------LFNGCDELKQLALKGNKVTGDINVSKCKNLQFLDVSS 227 (1176)
Q Consensus 160 ~~~~~~~~~~~L~~LdLs~N~i-~~~~~~~~~-----------~f~~~~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~ 227 (1176)
.+...+..+++|++|+|+++.- .+.+.+|.. .+..+++|++|+|++|.+++..
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~--------------- 128 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLD--------------- 128 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHH---------------
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHH---------------
Confidence 3455667788999999988643 211112210 1113445555555554443211
Q ss_pred CcccccCCCccC-CCC-CcEEEcCCCc-CCCC-cChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCc
Q 046275 228 NNFSMAVPSFGD-CLA-LEYLDISANK-FTGD-VGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSL 303 (1176)
Q Consensus 228 N~l~~~~~~l~~-l~~-L~~L~Ls~N~-l~~~-~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L 303 (1176)
+..+.. +++ |++|+|++|. ++.. .+.....+++|++|+|++|.+++... .....+...+++|
T Consensus 129 ------~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~--------~~l~~~~~~~~~L 194 (592)
T 3ogk_B 129 ------LDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDG--------KWLHELAQHNTSL 194 (592)
T ss_dssp ------HHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCS--------HHHHHHHHHCCCC
T ss_pred ------HHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcch--------hHHHHHHhcCCCc
Confidence 111222 222 5555555543 1111 11222345555555555555442110 0011223334566
Q ss_pred cEEEccCCccc----ccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccC---CCCcccccCCCCC
Q 046275 304 VKLDLSSNNLS----GKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFT---GALPDSLSNLTNL 376 (1176)
Q Consensus 304 ~~L~L~~n~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~---~~~p~~l~~l~~L 376 (1176)
++|++++|.++ +.++..+.++++|++|++++|.+. .++ ..+..+++|++|+++..... ...+..+..+++|
T Consensus 195 ~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~-~l~-~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L 272 (592)
T 3ogk_B 195 EVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEIL-ELV-GFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKL 272 (592)
T ss_dssp CEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGG-GGH-HHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTC
T ss_pred cEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHH-HHH-HHHhhhhHHHhhcccccccccchHHHHHHhhccccc
Confidence 66666666654 233344455666777777776665 344 34566677777777643222 2334556666777
Q ss_pred CEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCC-ccccccccCcEEEcCCcccc-CCCCccccCCCccCeee
Q 046275 377 ETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIP-STLSNCSQLVSLHLSFNYLT-GTIPSSLGSLSKLQDLK 454 (1176)
Q Consensus 377 ~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ 454 (1176)
+.|+++++... .+|..+ ..+++|++|+|++|.+++... ..+.++++|++|+++ |.+. +.++..+..+++|++|+
T Consensus 273 ~~L~l~~~~~~-~l~~~~--~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~ 348 (592)
T 3ogk_B 273 CRLGLSYMGPN-EMPILF--PFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLR 348 (592)
T ss_dssp CEEEETTCCTT-TGGGGG--GGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEE
T ss_pred cccCccccchh-HHHHHH--hhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEE
Confidence 77777765332 444433 234567777777777654332 335677788888887 4333 33444445677788888
Q ss_pred cc-----------cccccCCC-CCCCCCccccceeecccccccCcccccccc-CCCCCeeecc----ccccCCC-----C
Q 046275 455 LW-----------LNQLHGEI-PPELGNIQTLETLFLDFNELTGTLPAALSN-CTNLNWISLS----NNHLGGE-----I 512 (1176)
Q Consensus 455 L~-----------~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~ 512 (1176)
++ .|.+++.. +.....+++|++|+++.|++++..+..+.. +++|+.|+++ .|++++. +
T Consensus 349 L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~ 428 (592)
T 3ogk_B 349 IERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGV 428 (592)
T ss_dssp EECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHH
T ss_pred eecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHH
Confidence 87 35555332 222345678888888888888777777665 8888888886 6677753 3
Q ss_pred CccccCCCCCCeEEccCCc--ccccCCCCCCC-CCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCC
Q 046275 513 PTWIGQLSNLAILKLSNNS--FYGRIPPELGD-CRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGS 589 (1176)
Q Consensus 513 p~~~~~l~~L~~L~L~~N~--l~~~~p~~~~~-l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 589 (1176)
+..+..+++|++|+|++|. +++..+..+.. +++|+.|+|++|++++.-.+.+
T Consensus 429 ~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~------------------------- 483 (592)
T 3ogk_B 429 RSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEF------------------------- 483 (592)
T ss_dssp HHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHH-------------------------
T ss_pred HHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHH-------------------------
Confidence 3346668888888887533 55554444443 7788888888888764211110
Q ss_pred CcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccC-CCccccccccceeeecc
Q 046275 590 KECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGS-IPKEIGSMSYLFILNLG 668 (1176)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~-iP~~~~~l~~L~~L~L~ 668 (1176)
+..+.+|++|||++|.+++. +|..+..+++|+.|+|+
T Consensus 484 ------------------------------------------~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls 521 (592)
T 3ogk_B 484 ------------------------------------------SRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQ 521 (592)
T ss_dssp ------------------------------------------HTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEE
T ss_pred ------------------------------------------HhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECc
Confidence 11234688888888888755 44555678889999999
Q ss_pred CccccccCCccc-cCcCcccEEEccCccccccCCCCc-cccccccccccccccccCCCCCC
Q 046275 669 HNNLSGPIPTEV-GDLRGLNILDLSSNRLEGTIPSSM-SSLTLLNEIDLCNNQLTGMIPVM 727 (1176)
Q Consensus 669 ~N~l~g~iP~~~-~~L~~L~~L~Ls~N~l~g~iP~~l-~~l~~L~~l~ls~N~l~g~~p~~ 727 (1176)
+|++++.-...+ ..++.|....+..++-....|..- ......+.+. .+|.+.|..|..
T Consensus 522 ~n~it~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~ 581 (592)
T 3ogk_B 522 GYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHIL-AYYSLAGQRTDC 581 (592)
T ss_dssp SCBCCTTCTTGGGGCCTTEEEEEECCC---------------CCCEEE-EEECTTCSCSCC
T ss_pred CCcCCHHHHHHHHHhCCCcEEEEecCccccccccccCCcCCcchhheE-eeeecCCCccCC
Confidence 999886533333 356777666666543321111110 1111222232 356677777654
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=4.3e-28 Score=275.69 Aligned_cols=218 Identities=25% Similarity=0.243 Sum_probs=100.3
Q ss_pred CCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEE
Q 046275 300 CSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETL 379 (1176)
Q Consensus 300 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 379 (1176)
+++|++|+|++|++++..|..|..+++|++|+|++|++++..+ |..+++|++|+|++|.+++. + ..++|++|
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~Ls~n~l~~l-~----~~~~L~~L 104 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQEL-L----VGPSIETL 104 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE---ETTCTTCCEEECCSSEEEEE-E----ECTTCCEE
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh---hhhcCCCCEEECcCCccccc-c----CCCCcCEE
Confidence 3444444444444444444445555555555555555542222 34445555555555554421 1 12445555
Q ss_pred EccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeeccccc
Q 046275 380 DLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQ 459 (1176)
Q Consensus 380 ~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 459 (1176)
++++|++++..+. .+++|++|++++|++++..+..+..+++|++|+|++|++++..|..+.
T Consensus 105 ~l~~n~l~~~~~~-----~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-------------- 165 (317)
T 3o53_A 105 HAANNNISRVSCS-----RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA-------------- 165 (317)
T ss_dssp ECCSSCCSEEEEC-----CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGG--------------
T ss_pred ECCCCccCCcCcc-----ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHh--------------
Confidence 5555554432211 123344444444444444444444444444444444444433333331
Q ss_pred ccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCC
Q 046275 460 LHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPE 539 (1176)
Q Consensus 460 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 539 (1176)
..+++|++|+|++|+|++. |. ...+++|++|+|++|++++ +|..+..+++|++|+|++|+++ .+|..
T Consensus 166 ---------~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~ 232 (317)
T 3o53_A 166 ---------ASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKA 232 (317)
T ss_dssp ---------GGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTT
T ss_pred ---------hccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhH
Confidence 2344444444444444432 11 1224555555555555552 3333555555555555555555 34555
Q ss_pred CCCCCCCCEEEccCCCCc
Q 046275 540 LGDCRSLIWLDLNTNLFN 557 (1176)
Q Consensus 540 ~~~l~~L~~L~L~~N~l~ 557 (1176)
+..+++|+.|+|++|+++
T Consensus 233 ~~~l~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 233 LRFSQNLEHFDLRGNGFH 250 (317)
T ss_dssp CCCCTTCCEEECTTCCCB
T ss_pred hhcCCCCCEEEccCCCcc
Confidence 555555555555555555
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=6e-27 Score=281.85 Aligned_cols=234 Identities=25% Similarity=0.183 Sum_probs=167.5
Q ss_pred CccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecc
Q 046275 401 SLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLD 480 (1176)
Q Consensus 401 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 480 (1176)
+|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|++|+|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 45555555555555555566666666666666666665444 6666667777777776663322 2677777777
Q ss_pred cccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCC-CCCCCCEEEccCCCCccc
Q 046275 481 FNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG-DCRSLIWLDLNTNLFNGS 559 (1176)
Q Consensus 481 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~g~ 559 (1176)
+|.|++..+.. +++|+.|+|++|.+++..|..++.+++|++|+|++|.+++.+|..+. .+++|+.|+|++|.+++.
T Consensus 108 ~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 77777655543 46677777777777777777777777788888888887777777765 677888888888877642
Q ss_pred CChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCcc
Q 046275 560 IPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMM 639 (1176)
Q Consensus 560 ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 639 (1176)
|. ...+++|+
T Consensus 185 -~~---------------------------------------------------------------------~~~l~~L~ 194 (487)
T 3oja_A 185 -KG---------------------------------------------------------------------QVVFAKLK 194 (487)
T ss_dssp -EC---------------------------------------------------------------------CCCCTTCC
T ss_pred -cc---------------------------------------------------------------------cccCCCCC
Confidence 10 01134678
Q ss_pred EEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCcccc-ccCCCCccccccccccccc
Q 046275 640 FLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLE-GTIPSSMSSLTLLNEIDLC 716 (1176)
Q Consensus 640 ~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~-g~iP~~l~~l~~L~~l~ls 716 (1176)
+|||++|+|++ +|..++.+++|+.|+|++|+|++ +|..++.+++|+.|+|++|.+. +.+|..+..++.|+.++++
T Consensus 195 ~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 195 TLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp EEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred EEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 88888888886 44558888888899999998884 7888888888999999999888 7788888888888888886
No 320
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=2.2e-27 Score=289.38 Aligned_cols=185 Identities=19% Similarity=0.091 Sum_probs=130.5
Q ss_pred eEeEeCceEEEEEEE-CCCCEEEEEEeeccCC----------cCHHHHHHHHHHHHhc-CCCCcccceeEEeeCCeeEEE
Q 046275 867 LIGSGGFGDVYKAKL-KDGSTVAIKKLIHISG----------QGDREFTAEMETIGKI-KHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 867 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 934 (1176)
..+.|++|.+..++. -.|+.+++|.+.+... ...++|.+|+++|+++ .|+||++++++++++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 345667776666543 3589999999864321 1224689999999999 799999999999999999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||++||+|.+++...+ +++.. +|+.||+.||+|+|++ |||||||||+|||++++|.+||+|||+|+...
T Consensus 321 MEyv~G~~L~d~i~~~~----~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE----EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EECCCSEEHHHHHHTTC----CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EecCCCCcHHHHHHhCC----CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 99999999999998765 45553 4889999999999999 99999999999999999999999999998665
Q ss_pred cccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCC
Q 046275 1015 AMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRP 1064 (1176)
Q Consensus 1015 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P 1064 (1176)
.... .....+||+.|||||++.+ .+..++|+||+|++.+++.++..|
T Consensus 391 ~~~~--~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 391 QDCS--WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---C--CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCc--cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 4322 2345689999999999976 467789999999998887666544
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.1e-26 Score=279.36 Aligned_cols=216 Identities=26% Similarity=0.246 Sum_probs=123.7
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEE
Q 046275 301 SSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLD 380 (1176)
Q Consensus 301 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 380 (1176)
++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.+++..+ .++|++|+
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE---CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc---cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 366777777777766656667777777777777777664433 5566666666666666663221 25566666
Q ss_pred ccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccc
Q 046275 381 LSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQL 460 (1176)
Q Consensus 381 Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 460 (1176)
+++|.+++..+. .+++|+.|+|++|.+++..|..++++++|++|+|++|.++
T Consensus 106 L~~N~l~~~~~~-----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~----------------------- 157 (487)
T 3oja_A 106 AANNNISRVSCS-----RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID----------------------- 157 (487)
T ss_dssp CCSSCCCCEEEC-----CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCC-----------------------
T ss_pred CcCCcCCCCCcc-----ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCC-----------------------
Confidence 666666543222 1234555555555555444444444455555555555544
Q ss_pred cCCCCCCCC-CccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCC
Q 046275 461 HGEIPPELG-NIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPE 539 (1176)
Q Consensus 461 ~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 539 (1176)
+..|..+. .+++|++|+|++|.|++..+ +..+++|+.|+|++|+|++ +|..++.+++|+.|+|++|.+++ +|..
T Consensus 158 -~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~ 232 (487)
T 3oja_A 158 -TVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKA 232 (487)
T ss_dssp -EEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTT
T ss_pred -CcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchh
Confidence 44444443 45555555555555554322 2235666666666666664 33346666666666666666663 5666
Q ss_pred CCCCCCCCEEEccCCCCc
Q 046275 540 LGDCRSLIWLDLNTNLFN 557 (1176)
Q Consensus 540 ~~~l~~L~~L~L~~N~l~ 557 (1176)
+..+++|+.|++++|++.
T Consensus 233 l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 233 LRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp CCCCTTCCEEECTTCCBC
T ss_pred hccCCCCCEEEcCCCCCc
Confidence 666667777777777766
No 322
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=5.6e-29 Score=309.50 Aligned_cols=453 Identities=17% Similarity=0.162 Sum_probs=215.3
Q ss_pred CCcccceeEeCCCcEEEEecCCccccccchhhhhhhcCcccccccccCCCCCCCcccC-C------------CCCccccC
Q 046275 54 NPCGFKGVSCKAASVSSIDLSPFTLSVDFHLVASFLLTLDTLETLSLKNSNISGTISL-P------------AGSRCSSF 120 (1176)
Q Consensus 54 ~cC~W~gv~C~~~~v~~l~L~~~~~~~~~~~~~~~l~~~~~L~~L~L~~n~l~g~~~~-~------------~~~~~~~~ 120 (1176)
-|++|.++ ....+..+++..... ......+..++.|++|+|+++.......+ | .....+++
T Consensus 33 vck~W~~~--~~~~~~~l~~~~~~~----~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~ 106 (594)
T 2p1m_B 33 VCKSWYEI--ERWCRRKVFIGNCYA----VSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTW 106 (594)
T ss_dssp SCHHHHHH--HHHHCCEEEESSTTS----SCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTT
T ss_pred HHHHHHHh--hhhhceEEeeccccc----cCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCC
Confidence 46799998 222455666654221 12345577888999999998763321111 1 11234566
Q ss_pred ccccccCCcccCCCCCcccccC-CCCCCcEEecCCC-CCCccc-cccccccCCCcEEEccCCCCCCCCcc-ccccccCCC
Q 046275 121 LSSLDLSLNILSGPLSDISYLG-SCSSLKVLNLSSN-LLDFSG-REAGSLKLSLEVLDLSYNKISGANVV-PWILFNGCD 196 (1176)
Q Consensus 121 L~~LdLs~N~l~~~~~~~~~l~-~l~~L~~L~Ls~n-~i~~~~-~~~~~~~~~L~~LdLs~N~i~~~~~~-~~~~f~~~~ 196 (1176)
|++|+|++|.+++... ..+. .+++|++|+|++| .++... ......+++|++|+|++|.+++...- -......++
T Consensus 107 L~~L~L~~~~~~~~~~--~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 107 LEEIRLKRMVVTDDCL--ELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp CCEEEEESCBCCHHHH--HHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCeEEeeCcEEcHHHH--HHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 7777777776653211 1232 5667777777776 444322 23334566777777777766542211 011223555
Q ss_pred CccEEEeCCCc--ccc--ccc-CCCCCccceeeccCC-cccccCCCccCCCCCcEEEcCCCc-------CCCCcChhhhc
Q 046275 197 ELKQLALKGNK--VTG--DIN-VSKCKNLQFLDVSSN-NFSMAVPSFGDCLALEYLDISANK-------FTGDVGHAISA 263 (1176)
Q Consensus 197 ~L~~L~L~~n~--l~~--~~~-~~~l~~L~~L~Ls~N-~l~~~~~~l~~l~~L~~L~Ls~N~-------l~~~~~~~l~~ 263 (1176)
+|++|++++|. +.. ... +..+++|++|++++| .+++++..+..+++|++|+++.+. +.+ .+..+.+
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~ 263 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSG 263 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhc
Confidence 66666666664 111 000 123456666666655 333333334555556666544332 111 2224455
Q ss_pred cccCCeE-eeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccC-CccccCCCCCcEEEccCCcCcccC
Q 046275 264 CEHLSFL-NVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKV-PSRFGSCSSLESFDISSNKFSGEL 341 (1176)
Q Consensus 264 l~~L~~L-~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~i 341 (1176)
+++|+.| .+...... .++ .+...+++|++|+|++|.+++.. +..+..+++|++|++++| +++..
T Consensus 264 ~~~L~~Ls~~~~~~~~------------~l~-~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~ 329 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPA------------YLP-AVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAG 329 (594)
T ss_dssp CTTCCEEECCBTCCGG------------GGG-GGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHH
T ss_pred CCCcccccCCcccchh------------hHH-HHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHH
Confidence 5555555 22211100 111 11223455555565555544321 122345555555555555 32111
Q ss_pred CHHHHhcCCCCCEEEccC---------cccCCCCccccc-CCCCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCcc
Q 046275 342 PIEIFLSMSNLKELVLSF---------NDFTGALPDSLS-NLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNL 411 (1176)
Q Consensus 342 ~~~~~~~l~~L~~L~Ls~---------N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~ 411 (1176)
...+...+++|++|++++ +.+++.....+. ++++|+.|+++ .|.
T Consensus 330 l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~--------------------------~~~ 383 (594)
T 2p1m_B 330 LEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYF--------------------------CRQ 383 (594)
T ss_dssp HHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEE--------------------------ESC
T ss_pred HHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHh--------------------------cCC
Confidence 222223455555555522 223221111111 24444444444 444
Q ss_pred ccCCCCcccc-ccccCcEEEcC--C----ccccCC-----CCccccCCCccCeeecccccccCCCCCCCCC-ccccceee
Q 046275 412 LLGSIPSTLS-NCSQLVSLHLS--F----NYLTGT-----IPSSLGSLSKLQDLKLWLNQLHGEIPPELGN-IQTLETLF 478 (1176)
Q Consensus 412 l~~~~p~~l~-~l~~L~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~ 478 (1176)
+++..+..+. .+++|+.|+++ + |.+++. ++..+..+++|+.|+|++ .+++..+..++. +++|+.|+
T Consensus 384 l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~ 462 (594)
T 2p1m_B 384 MTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLS 462 (594)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEE
T ss_pred cCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEee
Confidence 4433333332 34555555555 2 333311 111234455566666644 444333333333 55666666
Q ss_pred cccccccCcccccc-ccCCCCCeeeccccccCCCCCc-cccCCCCCCeEEccCCcccccCCCCC-CCCCCCCEEEccCCC
Q 046275 479 LDFNELTGTLPAAL-SNCTNLNWISLSNNHLGGEIPT-WIGQLSNLAILKLSNNSFYGRIPPEL-GDCRSLIWLDLNTNL 555 (1176)
Q Consensus 479 L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~ 555 (1176)
|++|.+++..+..+ .++++|++|+|++|.+++..+. .+..+++|++|++++|+++......+ ..+++|+...+..+.
T Consensus 463 L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 463 VAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp EESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred ccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 66666654444443 4566666666666666433222 23346666666666666643222222 334566555555554
Q ss_pred C
Q 046275 556 F 556 (1176)
Q Consensus 556 l 556 (1176)
.
T Consensus 543 ~ 543 (594)
T 2p1m_B 543 A 543 (594)
T ss_dssp C
T ss_pred c
Confidence 3
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=6.5e-28 Score=299.90 Aligned_cols=449 Identities=18% Similarity=0.161 Sum_probs=241.0
Q ss_pred cEEEccCCCCCCCCccccccccCCCCccEEEeCCCcccccccCCCCCccceeeccCCcccccCC-CccCCCCCcEEEcCC
Q 046275 172 EVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGDINVSKCKNLQFLDVSSNNFSMAVP-SFGDCLALEYLDISA 250 (1176)
Q Consensus 172 ~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~ 250 (1176)
..++++.+... .+...+..+++|++|++++|....+..+..- +. ...+....+ ....+++|++|+|++
T Consensus 46 ~~l~~~~~~~~----~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~------~~-~~~~~~~l~~l~~~~~~L~~L~L~~ 114 (594)
T 2p1m_B 46 RKVFIGNCYAV----SPATVIRRFPKVRSVELKGKPHFADFNLVPD------GW-GGYVYPWIEAMSSSYTWLEEIRLKR 114 (594)
T ss_dssp CEEEESSTTSS----CHHHHHHHCTTCCEEEEECSCGGGGGTCSCT------TS-CCBCHHHHHHHHHHCTTCCEEEEES
T ss_pred eEEeecccccc----CHHHHHhhCCCceEEeccCCCchhhcccccc------cc-cchhhHHHHHHHHhCCCCCeEEeeC
Confidence 45666554332 3445567778888888887754322111000 00 000000001 123566777777777
Q ss_pred CcCCCCcChhhh-ccccCCeEeeccc-cccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccc----cCC
Q 046275 251 NKFTGDVGHAIS-ACEHLSFLNVSSN-LFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRF----GSC 324 (1176)
Q Consensus 251 N~l~~~~~~~l~-~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~----~~l 324 (1176)
|.+++..+..+. .+++|++|+|++| .+++ .....+...+++|++|+|++|.+++..+..+ ..+
T Consensus 115 ~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~-----------~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 115 MVVTDDCLELIAKSFKNFKVLVLSSCEGFST-----------DGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CBCCHHHHHHHHHHCTTCCEEEEESCEEEEH-----------HHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred cEEcHHHHHHHHHhCCCCcEEeCCCcCCCCH-----------HHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 777665555554 5677777777776 3331 1122334456777777777777664333322 355
Q ss_pred CCCcEEEccCCc--CcccCCHHHHhcCCCCCEEEccCc-ccCCCCcccccCCCCCCEEEccCCc-------CCCCCCccc
Q 046275 325 SSLESFDISSNK--FSGELPIEIFLSMSNLKELVLSFN-DFTGALPDSLSNLTNLETLDLSSNN-------LSGAIPHNL 394 (1176)
Q Consensus 325 ~~L~~L~Ls~N~--l~~~i~~~~~~~l~~L~~L~Ls~N-~l~~~~p~~l~~l~~L~~L~Ls~N~-------l~~~~p~~~ 394 (1176)
++|++|++++|. ++......++..+++|++|+|++| .+++ ++..+.++++|+.|+++.+. +.+ ++..+
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l 261 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVAL 261 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHH
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHH
Confidence 677777777776 221111222344677888888777 4443 56666777777777765443 221 22222
Q ss_pred cCCCCCCccEE-EccCccccCCCCccccccccCcEEEcCCccccCCC-CccccCCCccCeeecccccccCC-CCCCCCCc
Q 046275 395 CQGPRNSLKEL-FLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTI-PSSLGSLSKLQDLKLWLNQLHGE-IPPELGNI 471 (1176)
Q Consensus 395 ~~~~~~~L~~L-~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l 471 (1176)
..+++|+.| .+.+... +.++..+..+++|++|+|++|.+++.. +..+..+++|+.|++++| +... ++.....+
T Consensus 262 --~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~ 337 (594)
T 2p1m_B 262 --SGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTC 337 (594)
T ss_dssp --HTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHC
T ss_pred --hcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhC
Confidence 234556666 2332222 234444456677777777777765332 223456677777777766 3321 22222245
Q ss_pred cccceeec---------ccccccCccccccc-cCCCCCeeeccccccCCCCCcccc-CCCCCCeEEcc--C----Ccccc
Q 046275 472 QTLETLFL---------DFNELTGTLPAALS-NCTNLNWISLSNNHLGGEIPTWIG-QLSNLAILKLS--N----NSFYG 534 (1176)
Q Consensus 472 ~~L~~L~L---------~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~--~----N~l~~ 534 (1176)
++|++|++ +.+.+++.....+. ++++|+.|+++.|++++..+..+. .+++|+.|+|+ + |.+++
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC
Confidence 66777766 33455543333333 467777777777777655555554 46777777777 3 44441
Q ss_pred c-----CCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhc
Q 046275 535 R-----IPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERL 609 (1176)
Q Consensus 535 ~-----~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 609 (1176)
. ++..+..+++|+.|+|++ .+++..+..+..
T Consensus 418 ~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~------------------------------------------- 453 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGT------------------------------------------- 453 (594)
T ss_dssp CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHH-------------------------------------------
T ss_pred CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHH-------------------------------------------
Confidence 1 111144566777777755 333211111100
Q ss_pred cccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccc-cccccceeeeccCccccccCCc-cccCcCccc
Q 046275 610 SRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEI-GSMSYLFILNLGHNNLSGPIPT-EVGDLRGLN 687 (1176)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~-~~l~~L~~L~L~~N~l~g~iP~-~~~~L~~L~ 687 (1176)
...+|++|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+. .+..+++|+
T Consensus 454 ------------------------~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~ 509 (594)
T 2p1m_B 454 ------------------------YAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMR 509 (594)
T ss_dssp ------------------------HCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSS
T ss_pred ------------------------hchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCC
Confidence 12346777777777765544444 5567777777777777544333 344577777
Q ss_pred EEEccCccccccCCCCc-cccccccccccc
Q 046275 688 ILDLSSNRLEGTIPSSM-SSLTLLNEIDLC 716 (1176)
Q Consensus 688 ~L~Ls~N~l~g~iP~~l-~~l~~L~~l~ls 716 (1176)
+|+|++|+++..-...+ ..++.|+...+.
T Consensus 510 ~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~ 539 (594)
T 2p1m_B 510 SLWMSSCSVSFGACKLLGQKMPKLNVEVID 539 (594)
T ss_dssp EEEEESSCCBHHHHHHHHHHCTTEEEEEEC
T ss_pred EEeeeCCCCCHHHHHHHHHhCCCCEEEEec
Confidence 77777777753322222 333444443333
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1.7e-24 Score=241.03 Aligned_cols=152 Identities=24% Similarity=0.214 Sum_probs=91.3
Q ss_pred EEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeeccccc
Q 046275 404 ELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNE 483 (1176)
Q Consensus 404 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 483 (1176)
..+..+..++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|++++..+..|.++++|++|+|++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 3455555555 4454443 456677777777665555566666666666666666665555566666666666666666
Q ss_pred ccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCccccc-CCCCCCCCCCCCEEEccCCCCcc
Q 046275 484 LTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGR-IPPELGDCRSLIWLDLNTNLFNG 558 (1176)
Q Consensus 484 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~g 558 (1176)
+++..+..|.++++|++|++++|++++..+..++.+++|++|+|++|++.+. +|..+..+++|+.|+|++|++++
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCc
Confidence 6655556666666666666666666655454566666666666666666542 45555555556666665555553
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=3.3e-24 Score=238.62 Aligned_cols=227 Identities=23% Similarity=0.221 Sum_probs=157.0
Q ss_pred EEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCC
Q 046275 305 KLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSN 384 (1176)
Q Consensus 305 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 384 (1176)
..+..+.++. .+|..+. ++|++|++++|+++ .++...|..+++|++|+|++|.+++..+..+.++++|++|+|++|
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 86 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCC-EECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCccc-ccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCC
Confidence 3445555554 3444432 35666666666665 444444555666666666666665444445555555555555555
Q ss_pred cCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCC-
Q 046275 385 NLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGE- 463 (1176)
Q Consensus 385 ~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~- 463 (1176)
+++ +..+..|.++++|++|++++|++++..+..++.+++|++|++++|.+++.
T Consensus 87 ~l~--------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 140 (276)
T 2z62_A 87 PIQ--------------------------SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK 140 (276)
T ss_dssp CCC--------------------------EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCC
T ss_pred ccC--------------------------ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceec
Confidence 554 44445566677777777777777765555677777777777777777653
Q ss_pred CCCCCCCccccceeecccccccCccccccccCCCCC----eeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCC
Q 046275 464 IPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLN----WISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPE 539 (1176)
Q Consensus 464 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 539 (1176)
+|..++++++|++|+|++|++++..+..|..+.+|+ .|++++|++++..+..+ ...+|++|+|++|++++..+..
T Consensus 141 l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~ 219 (276)
T 2z62_A 141 LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGI 219 (276)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTT
T ss_pred CchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhH
Confidence 577788888888888888888877777777777777 88999999986555444 4458999999999999666667
Q ss_pred CCCCCCCCEEEccCCCCcccCCh
Q 046275 540 LGDCRSLIWLDLNTNLFNGSIPP 562 (1176)
Q Consensus 540 ~~~l~~L~~L~L~~N~l~g~ip~ 562 (1176)
+..+++|+.|+|++|+++|.+|.
T Consensus 220 ~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 220 FDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp TTTCCSCCEEECCSSCBCCCTTT
T ss_pred hcccccccEEEccCCcccccCCc
Confidence 88999999999999999998873
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.7e-24 Score=238.62 Aligned_cols=139 Identities=24% Similarity=0.231 Sum_probs=74.1
Q ss_pred ccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCC
Q 046275 420 LSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLN 499 (1176)
Q Consensus 420 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 499 (1176)
+.++++|++|+|++|++++..+..+..+++|++|++++|++++..+..++.+++|++|+|++|++++..+..|.++++|+
T Consensus 81 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 160 (272)
T 3rfs_A 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLT 160 (272)
T ss_dssp GTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCC
Confidence 33444444455554444444444444444555555555555444444455555555555555555544444555555555
Q ss_pred eeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcc
Q 046275 500 WISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNG 558 (1176)
Q Consensus 500 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g 558 (1176)
+|++++|++++..|..++.+++|++|+|++|++++..|..+..+++|+.|+|++|++.|
T Consensus 161 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 161 ELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred EEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 55555555555545555555666666666666655555555556666666666665554
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=9e-23 Score=226.14 Aligned_cols=206 Identities=26% Similarity=0.291 Sum_probs=158.0
Q ss_pred CCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEE
Q 046275 326 SLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKEL 405 (1176)
Q Consensus 326 ~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L 405 (1176)
+++++++++++++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~------------------ 74 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNI---PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ------------------ 74 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCC---CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS------------------
T ss_pred CCCEEEccCCCCC-ccCCCC---CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC------------------
Confidence 4567777777776 566443 245677777777776555556666666666666666665
Q ss_pred EccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeeccccccc
Q 046275 406 FLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELT 485 (1176)
Q Consensus 406 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 485 (1176)
...+..|.++++|++|+|++|++++..+..|..+++|++|++++|++++..|..|+.+++|++|+|++|+|+
T Consensus 75 --------~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 146 (270)
T 2o6q_A 75 --------TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146 (270)
T ss_dssp --------CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred --------eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC
Confidence 223344566677777777777777666666777788888888888888777777888888888888888888
Q ss_pred CccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCC
Q 046275 486 GTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIP 561 (1176)
Q Consensus 486 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip 561 (1176)
+..+..|.++++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++.+..+
T Consensus 147 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 147 SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred ccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 7777778899999999999999997777778899999999999999997666678899999999999999988765
No 328
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=1.7e-24 Score=262.48 Aligned_cols=186 Identities=17% Similarity=0.203 Sum_probs=148.0
Q ss_pred CCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcC--------HHHHHHHHHHHHhcCCCCcccceeEEeeCCeeEEE
Q 046275 863 HNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQG--------DREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 863 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 934 (1176)
...+.||+|+||.||+|+. .++.+++|+........ .+.+.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3457899999999999954 48899999875432211 23478999999999999999777777788888999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
|||+++|+|.+++.. +..++.|+++||+|||++ +|+||||||+||+++. .+||+|||+|+...
T Consensus 418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 999999999999875 458999999999999999 9999999999999999 99999999999775
Q ss_pred cccccc-----cccccccCCcccCccccCC--CCCCchhhhHHHHHHHHHHHcCCCCCC
Q 046275 1015 AMDTHL-----SVSTLAGTPGYVPPEYYQS--FRCSTKGDVYSYGVVLLELLTGKRPTD 1066 (1176)
Q Consensus 1015 ~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~P~~ 1066 (1176)
..+... ......||+.|||||++.. ..|+..+|+|+..+-..+.+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 433211 1235679999999999976 567888999999999999888877763
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=6.2e-23 Score=229.47 Aligned_cols=211 Identities=26% Similarity=0.264 Sum_probs=163.3
Q ss_pred ccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCC
Q 046275 321 FGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRN 400 (1176)
Q Consensus 321 ~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 400 (1176)
+.++++|+++++++|+++ .+|..++ +++++|+|++|.+++..+..|.++++|++|+|++|.+++ ++
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~--------- 71 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ--------- 71 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE---------
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-cc---------
Confidence 566777888888888876 6775542 567777777777776666777777777777777777652 11
Q ss_pred CccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecc
Q 046275 401 SLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLD 480 (1176)
Q Consensus 401 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 480 (1176)
. .+.+++|++|+|++|+++ .+|..+..+++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 72 -----------------~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~ 132 (290)
T 1p9a_G 72 -----------------V-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132 (290)
T ss_dssp -----------------C-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECT
T ss_pred -----------------C-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECC
Confidence 1 145566777777777776 566677777778888888888876666778888888888888
Q ss_pred cccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccC
Q 046275 481 FNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSI 560 (1176)
Q Consensus 481 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~i 560 (1176)
+|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+++ .+|..+..+.+|+.|+|++|++.+..
T Consensus 133 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 88888777778888999999999999999766667788999999999999998 78999999999999999999998765
Q ss_pred ChhHH
Q 046275 561 PPALF 565 (1176)
Q Consensus 561 p~~~~ 565 (1176)
.-..|
T Consensus 212 ~~~~l 216 (290)
T 1p9a_G 212 EILYF 216 (290)
T ss_dssp GGHHH
T ss_pred ccHHH
Confidence 43333
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=1.1e-23 Score=233.57 Aligned_cols=205 Identities=21% Similarity=0.248 Sum_probs=98.5
Q ss_pred cCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCC
Q 046275 322 GSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNS 401 (1176)
Q Consensus 322 ~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~ 401 (1176)
..+++|+.|++++|.++ .++. +..+++|++|++++|.+++. ..+.++++|++|+|++|.+++
T Consensus 38 ~~l~~L~~L~l~~~~i~-~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~------------- 99 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIK-SVQG--IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQS------------- 99 (272)
T ss_dssp HHHTTCCEEECTTSCCC-CCTT--GGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCC-------------
T ss_pred ccccceeeeeeCCCCcc-cccc--cccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCc-------------
Confidence 34455555555555554 3321 34455555555555555432 244444555555555554442
Q ss_pred ccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeeccc
Q 046275 402 LKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDF 481 (1176)
Q Consensus 402 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 481 (1176)
..+..+.++++|++|+|++|++++..+..|..+++|++|++++|++++..+..++.+++|++|+|++
T Consensus 100 -------------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 166 (272)
T 3rfs_A 100 -------------LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSY 166 (272)
T ss_dssp -------------CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred -------------cChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCC
Confidence 2223334444444444444444433333444444444444444444444444444455555555555
Q ss_pred ccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCC
Q 046275 482 NELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIP 561 (1176)
Q Consensus 482 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip 561 (1176)
|++++..+..|.++++|++|++++|++++..|..+..+++|++|+|++|.+.+. +++|+.|+++.|.++|.+|
T Consensus 167 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 167 NQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVR 239 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBB
T ss_pred CCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCccc
Confidence 555544444445555555555555555544444455555555555555554432 2345555555555555555
Q ss_pred hhH
Q 046275 562 PAL 564 (1176)
Q Consensus 562 ~~~ 564 (1176)
.++
T Consensus 240 ~~~ 242 (272)
T 3rfs_A 240 NSA 242 (272)
T ss_dssp CTT
T ss_pred Ccc
Confidence 544
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=9e-24 Score=239.30 Aligned_cols=205 Identities=22% Similarity=0.192 Sum_probs=161.3
Q ss_pred CccCeeecccccccCCCCCCC--CCccccceeecccccccCccc----cccccCCCCCeeeccccccCCCCCccccCCCC
Q 046275 448 SKLQDLKLWLNQLHGEIPPEL--GNIQTLETLFLDFNELTGTLP----AALSNCTNLNWISLSNNHLGGEIPTWIGQLSN 521 (1176)
Q Consensus 448 ~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 521 (1176)
++|++|++++|.+.+..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|++++..|..++.+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 457777777777777777766 777777788888887776544 34567889999999999998888888999999
Q ss_pred CCeEEccCCccccc--C--CCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCC
Q 046275 522 LAILKLSNNSFYGR--I--PPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGN 597 (1176)
Q Consensus 522 L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1176)
|++|+|++|++.+. + +..++.+++|++|+|++|+++. +|.....
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~------------------------------- 218 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAA------------------------------- 218 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHH-------------------------------
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHH-------------------------------
Confidence 99999999988652 2 3345788999999999999862 2221100
Q ss_pred chhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCcccccc---ccceeeeccCccccc
Q 046275 598 LLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSM---SYLFILNLGHNNLSG 674 (1176)
Q Consensus 598 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l---~~L~~L~L~~N~l~g 674 (1176)
.+..+.+|++||||+|+|++.+|..++.+ ++|+.|+|++|+|+
T Consensus 219 ---------------------------------l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~- 264 (310)
T 4glp_A 219 ---------------------------------LAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE- 264 (310)
T ss_dssp ---------------------------------HHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-
T ss_pred ---------------------------------HHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-
Confidence 01123468899999999999889988887 69999999999999
Q ss_pred cCCccccCcCcccEEEccCccccccCCCCccccccccccccccccccC
Q 046275 675 PIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLTG 722 (1176)
Q Consensus 675 ~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~g 722 (1176)
.+|..+. ++|++|||++|+|++ +|. +..+++|+.|+|++|+|+.
T Consensus 265 ~lp~~~~--~~L~~L~Ls~N~l~~-~~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 265 QVPKGLP--AKLRVLDLSSNRLNR-APQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp SCCSCCC--SCCSCEECCSCCCCS-CCC-TTSCCCCSCEECSSTTTSC
T ss_pred chhhhhc--CCCCEEECCCCcCCC-Cch-hhhCCCccEEECcCCCCCC
Confidence 8898885 899999999999995 454 6788999999999999974
No 332
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.1e-24 Score=252.65 Aligned_cols=255 Identities=22% Similarity=0.187 Sum_probs=130.6
Q ss_pred EEccCCcccccCCccccCCCCCcEEEccCCcCcccCCH----HHHhcCC-CCCEEEccCcccCCCCcccccCC-----CC
Q 046275 306 LDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPI----EIFLSMS-NLKELVLSFNDFTGALPDSLSNL-----TN 375 (1176)
Q Consensus 306 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~----~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l-----~~ 375 (1176)
++++.|++++.+|..+...++|++|+|++|.++ .++. +.|..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~-~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLY-SISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGG-GSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCC-hHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 445555555555555555555666666666655 3443 3445555 56666666666655544444443 55
Q ss_pred CCEEEccCCcCCCCCCccccCC--CC-CCccEEEccCccccCCCCcccc----c-cccCcEEEcCCccccCCC----Ccc
Q 046275 376 LETLDLSSNNLSGAIPHNLCQG--PR-NSLKELFLQNNLLLGSIPSTLS----N-CSQLVSLHLSFNYLTGTI----PSS 443 (1176)
Q Consensus 376 L~~L~Ls~N~l~~~~p~~~~~~--~~-~~L~~L~L~~N~l~~~~p~~l~----~-l~~L~~L~Ls~N~l~~~~----p~~ 443 (1176)
|++|+|++|.+++..+..++.. .. ++|++|+|++|.+++..+..+. . .++|++|+|++|++++.. +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 6666666666554443322111 11 3455555555555544333322 2 246666666666665322 222
Q ss_pred ccCCC-ccCeeecccccccCCCCCCCCC----c-cccceeecccccccCc----ccccccc-CCCCCeeeccccccCCCC
Q 046275 444 LGSLS-KLQDLKLWLNQLHGEIPPELGN----I-QTLETLFLDFNELTGT----LPAALSN-CTNLNWISLSNNHLGGEI 512 (1176)
Q Consensus 444 ~~~l~-~L~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~L~~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~ 512 (1176)
+..++ +|++|+|++|++++..+..+.. + ++|++|+|++|+|++. ++..+.. .++|++|+|++|++++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 33333 5666666666555444433332 2 3566666666666532 3344444 236666666666666443
Q ss_pred C----ccccCCCCCCeEEccCCcccc-------cCCCCCCCCCCCCEEEccCCCCcccCC
Q 046275 513 P----TWIGQLSNLAILKLSNNSFYG-------RIPPELGDCRSLIWLDLNTNLFNGSIP 561 (1176)
Q Consensus 513 p----~~~~~l~~L~~L~L~~N~l~~-------~~p~~~~~l~~L~~L~L~~N~l~g~ip 561 (1176)
+ ..+..+++|++|+|++|.+.+ .++..+..+++|+.||+++|++.+..|
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 3 223445566666666665322 223355556666666666666654433
No 333
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=1.1e-22 Score=227.40 Aligned_cols=202 Identities=27% Similarity=0.294 Sum_probs=139.5
Q ss_pred hcCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCC
Q 046275 298 DLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLE 377 (1176)
Q Consensus 298 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 377 (1176)
..+++++++++++|+++ .+|..+. ++|++|+|++|.++ .++...|..+++|++|+|++|.+++. +. ...+++|+
T Consensus 7 ~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~ 80 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLY-TFSLATLMPYTRLTQLNLDRAELTKL-QV-DGTLPVLG 80 (290)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCS-EEEGGGGTTCTTCCEEECTTSCCCEE-EC-CSCCTTCC
T ss_pred cccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCC-ccCHHHhhcCCCCCEEECCCCccCcc-cC-CCCCCcCC
Confidence 34678999999999999 5676654 78999999999998 66667789999999999999999964 33 27788888
Q ss_pred EEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeeccc
Q 046275 378 TLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWL 457 (1176)
Q Consensus 378 ~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 457 (1176)
+|+|++|+++ .+|. .+..+++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 81 ~L~Ls~N~l~-~l~~--------------------------~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~ 133 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPL--------------------------LGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG 133 (290)
T ss_dssp EEECCSSCCS-SCCC--------------------------CTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTT
T ss_pred EEECCCCcCC-cCch--------------------------hhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCC
Confidence 8888888876 4443 334445555555555555544445555555555555555
Q ss_pred ccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCccc
Q 046275 458 NQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFY 533 (1176)
Q Consensus 458 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 533 (1176)
|++++..+..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|.+.
T Consensus 134 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 134 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 5555444455556666666666666666544555566666666666666666 55666666666666777666664
No 334
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.89 E-value=2.9e-22 Score=221.98 Aligned_cols=204 Identities=28% Similarity=0.340 Sum_probs=152.8
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEE
Q 046275 301 SSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLD 380 (1176)
Q Consensus 301 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 380 (1176)
.+.+.+++++++++ .+|..+. ++|++|+|++|+++ .++...|..+++|++|+|++|.++...+..|.++++|++|+
T Consensus 16 ~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~ 91 (270)
T 2o6q_A 16 NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLW 91 (270)
T ss_dssp TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEE
T ss_pred CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEE
Confidence 46899999999999 5776654 68999999999998 77877789999999999999999976666678899999999
Q ss_pred ccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccc
Q 046275 381 LSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQL 460 (1176)
Q Consensus 381 Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 460 (1176)
|++|++++..+ ..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+
T Consensus 92 l~~n~l~~~~~--------------------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 145 (270)
T 2o6q_A 92 VTDNKLQALPI--------------------------GVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL 145 (270)
T ss_dssp CCSSCCCCCCT--------------------------TTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCcCCcCCH--------------------------hHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcC
Confidence 99988873222 2344455666666666666655555566666666666666666
Q ss_pred cCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccc
Q 046275 461 HGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYG 534 (1176)
Q Consensus 461 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 534 (1176)
++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+..+++|+.|+|++|.+..
T Consensus 146 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 146 QSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 65555556677777777777777776666667777777777777777776656667777888888888887753
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=1.7e-24 Score=250.83 Aligned_cols=177 Identities=23% Similarity=0.234 Sum_probs=96.7
Q ss_pred EEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCC----ccccccc-cCcEEEcCCccccCCCCccccCC-----C
Q 046275 379 LDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIP----STLSNCS-QLVSLHLSFNYLTGTIPSSLGSL-----S 448 (1176)
Q Consensus 379 L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p----~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~ 448 (1176)
++|++|.+++.+|..+ ....+|++|+|++|.+++..+ ..+.+++ +|++|+|++|++++..+..+..+ +
T Consensus 3 ~~ls~n~~~~~~~~~~--~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFT--SIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EECCCCTTCCHHHHHH--TSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred cccccccchHHHHHHH--hCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 5666666666665544 223446666666666665544 4555555 66666666666665555555443 5
Q ss_pred ccCeeecccccccCCCCCCCCCc-----cccceeecccccccCcccccccc-----CCCCCeeeccccccCCCCCc----
Q 046275 449 KLQDLKLWLNQLHGEIPPELGNI-----QTLETLFLDFNELTGTLPAALSN-----CTNLNWISLSNNHLGGEIPT---- 514 (1176)
Q Consensus 449 ~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~~p~---- 514 (1176)
+|++|+|++|.+++..+..+... ++|++|+|++|+|++..+..+.. .++|++|+|++|++++..+.
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 66666666666665544433332 55666666666665544444332 24566666666666543222
Q ss_pred cccCCC-CCCeEEccCCcccccCCCCCC----CC-CCCCEEEccCCCCc
Q 046275 515 WIGQLS-NLAILKLSNNSFYGRIPPELG----DC-RSLIWLDLNTNLFN 557 (1176)
Q Consensus 515 ~~~~l~-~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~L~~N~l~ 557 (1176)
.+..++ +|++|+|++|++++..+..+. .+ ++|+.|||++|.++
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~ 209 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLG 209 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCC
Confidence 223333 566666666666544443222 22 35666666666554
No 336
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=8.8e-25 Score=255.95 Aligned_cols=248 Identities=21% Similarity=0.184 Sum_probs=178.7
Q ss_pred CCCccccccccCcEEEcCCccccCCCC----ccccCCCccCeeecccc---cccCCCCCCC-------CCccccceeecc
Q 046275 415 SIPSTLSNCSQLVSLHLSFNYLTGTIP----SSLGSLSKLQDLKLWLN---QLHGEIPPEL-------GNIQTLETLFLD 480 (1176)
Q Consensus 415 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~L~ 480 (1176)
.++..+..+++|++|+|++|++++..+ ..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 345556666777777777777765422 33556777777777764 3444555444 567788888888
Q ss_pred cccccC----ccccccccCCCCCeeeccccccCCCCCccccC----C---------CCCCeEEccCCccc-ccCC---CC
Q 046275 481 FNELTG----TLPAALSNCTNLNWISLSNNHLGGEIPTWIGQ----L---------SNLAILKLSNNSFY-GRIP---PE 539 (1176)
Q Consensus 481 ~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~----l---------~~L~~L~L~~N~l~-~~~p---~~ 539 (1176)
+|.+++ .+|..+.++++|++|+|++|.+++..+..+.. + ++|++|+|++|+++ +.+| ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 888876 46777788888888888888876444433333 3 78888888888886 3444 45
Q ss_pred CCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCc
Q 046275 540 LGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCN 619 (1176)
Q Consensus 540 ~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 619 (1176)
+..+++|+.|+|++|+++..=-..+.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~------------------------------------------------------ 208 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLL------------------------------------------------------ 208 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHH------------------------------------------------------
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHH------------------------------------------------------
Confidence 66788888888888887620000000
Q ss_pred cccccCCCCCCCcCCCCCccEEEcccCcCc----cCCCccccccccceeeeccCcccccc----CCccc--cCcCcccEE
Q 046275 620 FTRVYGGHTQPTFNHNGSMMFLDISYNMLS----GSIPKEIGSMSYLFILNLGHNNLSGP----IPTEV--GDLRGLNIL 689 (1176)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~----g~iP~~~~~l~~L~~L~L~~N~l~g~----iP~~~--~~L~~L~~L 689 (1176)
...+..+.+|++|+|++|.++ +.+|..+..+++|+.|+|++|++++. +|..+ +.+++|++|
T Consensus 209 ---------~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L 279 (386)
T 2ca6_A 209 ---------LEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTL 279 (386)
T ss_dssp ---------HTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEE
T ss_pred ---------HHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEE
Confidence 001234457888999999986 67888899999999999999999876 67777 458999999
Q ss_pred EccCccccc----cCCCCc-cccccccccccccccccCCCC
Q 046275 690 DLSSNRLEG----TIPSSM-SSLTLLNEIDLCNNQLTGMIP 725 (1176)
Q Consensus 690 ~Ls~N~l~g----~iP~~l-~~l~~L~~l~ls~N~l~g~~p 725 (1176)
+|++|++++ .+|..+ .++++|+.|+|++|++++..|
T Consensus 280 ~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 280 RLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp ECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred ECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 999999997 588888 668999999999999998776
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=1.4e-22 Score=229.49 Aligned_cols=227 Identities=22% Similarity=0.226 Sum_probs=178.8
Q ss_pred CCcEEEccCCcCcccCCHHH--HhcCCCCCEEEccCcccCCCCcccc--cCCCCCCEEEccCCcCCCCCCc--cccCCCC
Q 046275 326 SLESFDISSNKFSGELPIEI--FLSMSNLKELVLSFNDFTGALPDSL--SNLTNLETLDLSSNNLSGAIPH--NLCQGPR 399 (1176)
Q Consensus 326 ~L~~L~Ls~N~l~~~i~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~~p~--~~~~~~~ 399 (1176)
.++.|.+.++.++...-..+ +..+++|++|++++|.+++..|..+ ..+++|++|+|++|.+++..+. ......+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 46667777766642111111 2235679999999999988888887 8889999999999998876552 1111346
Q ss_pred CCccEEEccCccccCCCCccccccccCcEEEcCCccccCC--C--CccccCCCccCeeecccccccCCCCC----CCCCc
Q 046275 400 NSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGT--I--PSSLGSLSKLQDLKLWLNQLHGEIPP----ELGNI 471 (1176)
Q Consensus 400 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l 471 (1176)
++|++|+|++|++++..|..++++++|++|+|++|++.+. + +..++.+++|++|+|++|+++ .+|. .++.+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 7899999999999888888999999999999999998642 2 234578899999999999997 3333 25678
Q ss_pred cccceeecccccccCccccccccC---CCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCE
Q 046275 472 QTLETLFLDFNELTGTLPAALSNC---TNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIW 548 (1176)
Q Consensus 472 ~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 548 (1176)
++|++|+|++|+|++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++|+|++|++++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 999999999999998878888777 69999999999999 7788775 7999999999999953 44 678899999
Q ss_pred EEccCCCCcc
Q 046275 549 LDLNTNLFNG 558 (1176)
Q Consensus 549 L~L~~N~l~g 558 (1176)
|+|++|+++.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999874
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=3.3e-22 Score=217.35 Aligned_cols=131 Identities=17% Similarity=0.174 Sum_probs=77.4
Q ss_pred cCcEEEcCCccccCCCCccccCCCccCeeeccccc-ccCCCCCCCCCccccceeeccc-ccccCccccccccCCCCCeee
Q 046275 425 QLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQ-LHGEIPPELGNIQTLETLFLDF-NELTGTLPAALSNCTNLNWIS 502 (1176)
Q Consensus 425 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 502 (1176)
+|++|++++|++++..+..|..+++|++|++++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 55566666666654444455555666666666654 5544444555666666666665 666655555666666666666
Q ss_pred ccccccCCCCCccccCCCCCC---eEEccCC-cccccCCCCCCCCCCCC-EEEccCCCCc
Q 046275 503 LSNNHLGGEIPTWIGQLSNLA---ILKLSNN-SFYGRIPPELGDCRSLI-WLDLNTNLFN 557 (1176)
Q Consensus 503 Ls~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~ 557 (1176)
+++|++++ +|. +..+++|+ +|++++| ++++..+..|.++++|+ .|++++|+++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 66666663 444 55566665 6666666 66544445566666666 6666666655
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=4.6e-22 Score=216.15 Aligned_cols=205 Identities=22% Similarity=0.268 Sum_probs=154.6
Q ss_pred ccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeeccccc-ccCccccccccCCCCCeeeccc-cccCCCCC
Q 046275 436 LTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNE-LTGTLPAALSNCTNLNWISLSN-NHLGGEIP 513 (1176)
Q Consensus 436 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p 513 (1176)
++ .+|. +. ++|++|++++|++++..+..|.++++|++|++++|+ +++..+..|.++++|++|++++ |++++..+
T Consensus 23 l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~ 98 (239)
T 2xwt_C 23 IQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDP 98 (239)
T ss_dssp CS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECT
T ss_pred cc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCH
Confidence 55 5666 43 378889999998887777788888888999998887 8866667888888888888888 88887666
Q ss_pred ccccCCCCCCeEEccCCcccccCCCCCCCCCCCC---EEEccCC-CCcccCChhHHhhcccchhhhccccceeeeecCCC
Q 046275 514 TWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLI---WLDLNTN-LFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGS 589 (1176)
Q Consensus 514 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 589 (1176)
..|..+++|++|++++|++++ +|. +..+++|+ .|++++| .+++ +|+..
T Consensus 99 ~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~-i~~~~------------------------- 150 (239)
T 2xwt_C 99 DALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTS-IPVNA------------------------- 150 (239)
T ss_dssp TSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCE-ECTTT-------------------------
T ss_pred HHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhh-cCccc-------------------------
Confidence 788888888888888888885 666 77888887 8888888 6653 33221
Q ss_pred CcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCcc-EEEcccCcCccCCCccccccccceeeecc
Q 046275 590 KECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMM-FLDISYNMLSGSIPKEIGSMSYLFILNLG 668 (1176)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~LdLs~N~l~g~iP~~~~~l~~L~~L~L~ 668 (1176)
|..+.+|+ +|+|++|+++ .+|......++|+.|+|+
T Consensus 151 ------------------------------------------~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 151 ------------------------------------------FQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp ------------------------------------------TTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECT
T ss_pred ------------------------------------------ccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcC
Confidence 22345677 8888888888 566554444788888888
Q ss_pred Ccc-ccccCCccccCc-CcccEEEccCccccccCCCCccccccccccccccc
Q 046275 669 HNN-LSGPIPTEVGDL-RGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNN 718 (1176)
Q Consensus 669 ~N~-l~g~iP~~~~~L-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N 718 (1176)
+|+ +++..|..|+.+ ++|+.|||++|+|+ .+|.. .+.+|+.|+++++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT--TCTTCSEEECTTC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh--HhccCceeeccCc
Confidence 884 885556678888 88888888888887 56655 5667777777765
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=2.6e-21 Score=211.83 Aligned_cols=182 Identities=23% Similarity=0.245 Sum_probs=160.1
Q ss_pred CCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeee
Q 046275 375 NLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLK 454 (1176)
Q Consensus 375 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 454 (1176)
..++++++++.++ .+|..+ .++++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|..+++|++|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~----~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 89 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGI----PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLG 89 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCC----CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCeEEecCCCCcc-ccCCCC----CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEE
Confidence 4567777777776 566544 24688888888888877788889999999999999999988888899999999999
Q ss_pred cccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccc
Q 046275 455 LWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYG 534 (1176)
Q Consensus 455 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 534 (1176)
|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|+.+++|++|+|++|++++
T Consensus 90 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 169 (251)
T 3m19_A 90 LANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQS 169 (251)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCc
Confidence 99999998888889999999999999999998778889999999999999999997777789999999999999999998
Q ss_pred cCCCCCCCCCCCCEEEccCCCCcccCC
Q 046275 535 RIPPELGDCRSLIWLDLNTNLFNGSIP 561 (1176)
Q Consensus 535 ~~p~~~~~l~~L~~L~L~~N~l~g~ip 561 (1176)
..|..+..+++|+.|+|++|++++..+
T Consensus 170 ~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 170 VPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred cCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 777889999999999999999998733
No 341
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=4.6e-23 Score=236.53 Aligned_cols=230 Identities=17% Similarity=0.233 Sum_probs=155.2
Q ss_pred ccCcEEEcCCccccCCCCccccCCCccCeeecccccccCC-CCCCCCCccccceeecccccccCccccccccCCCCCeee
Q 046275 424 SQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGE-IPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWIS 502 (1176)
Q Consensus 424 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 502 (1176)
++++.|++++|.+++..+. +..+++|++|++++|.+++. +|..+..+++|++|+|++|++++..|..+.++++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4555666666665544333 34556666666666665544 555566666667777777766666666677777777777
Q ss_pred cccc-ccCCC-CCccccCCCCCCeEEccCC-ccccc-CCCCCCCCC-CCCEEEccCCC--Cc-ccCChhHHhhcccchhh
Q 046275 503 LSNN-HLGGE-IPTWIGQLSNLAILKLSNN-SFYGR-IPPELGDCR-SLIWLDLNTNL--FN-GSIPPALFKQSGKIAAN 574 (1176)
Q Consensus 503 Ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~-~L~~L~L~~N~--l~-g~ip~~~~~~~~~l~~~ 574 (1176)
|++| .+++. +|..+..+++|++|++++| .+++. +|..+..++ +|+.|+|++|. ++ +.+|..
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~----------- 217 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTL----------- 217 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHH-----------
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHH-----------
Confidence 7777 55542 5555667777777777777 77643 455666777 78888887773 33 122211
Q ss_pred hccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCc-CccCCC
Q 046275 575 FIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNM-LSGSIP 653 (1176)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~-l~g~iP 653 (1176)
+..+++|+.|+|++|. +++..|
T Consensus 218 ---------------------------------------------------------~~~~~~L~~L~l~~~~~l~~~~~ 240 (336)
T 2ast_B 218 ---------------------------------------------------------VRRCPNLVHLDLSDSVMLKNDCF 240 (336)
T ss_dssp ---------------------------------------------------------HHHCTTCSEEECTTCTTCCGGGG
T ss_pred ---------------------------------------------------------HhhCCCCCEEeCCCCCcCCHHHH
Confidence 1122468888999888 777788
Q ss_pred ccccccccceeeeccCcc-ccccCCccccCcCcccEEEccCccccccCCC-Cccccc-cccccccccccccCCCCCC
Q 046275 654 KEIGSMSYLFILNLGHNN-LSGPIPTEVGDLRGLNILDLSSNRLEGTIPS-SMSSLT-LLNEIDLCNNQLTGMIPVM 727 (1176)
Q Consensus 654 ~~~~~l~~L~~L~L~~N~-l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~-~l~~l~-~L~~l~ls~N~l~g~~p~~ 727 (1176)
..++.+++|+.|+|++|. ++......++++++|+.|+|++| +|. .+..+. .|..|++++|+++|..|..
T Consensus 241 ~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-----i~~~~~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 241 QEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-----VPDGTLQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp GGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-----SCTTCHHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred HHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-----cCHHHHHHHHhhCcceEEecccCccccCCc
Confidence 888999999999999995 32222236888999999999998 443 456664 4889999999999998853
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=4.7e-24 Score=249.73 Aligned_cols=241 Identities=25% Similarity=0.277 Sum_probs=163.8
Q ss_pred cCCCccEEEccCCccccc----CCccccCCCCCcEEEccCC---cCcccCCHHH------HhcCCCCCEEEccCcccCC-
Q 046275 299 LCSSLVKLDLSSNNLSGK----VPSRFGSCSSLESFDISSN---KFSGELPIEI------FLSMSNLKELVLSFNDFTG- 364 (1176)
Q Consensus 299 ~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N---~l~~~i~~~~------~~~l~~L~~L~Ls~N~l~~- 364 (1176)
.+++|++|+|++|++++. ++..+..+++|++|+|++| ++++.+|..+ +..+++|++|+|++|.+++
T Consensus 30 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 109 (386)
T 2ca6_A 30 EDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPT 109 (386)
T ss_dssp HCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTT
T ss_pred cCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHH
Confidence 356777777777777654 3334666777777777774 3344455443 3456666666666666665
Q ss_pred ---CCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCcccccc---------ccCcEEEcC
Q 046275 365 ---ALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNC---------SQLVSLHLS 432 (1176)
Q Consensus 365 ---~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l---------~~L~~L~Ls 432 (1176)
.+|..+.++++|++|+|++|.+++..+..+ +..+..+ ++|++|+|+
T Consensus 110 ~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l----------------------~~~l~~l~~~~~~~~~~~L~~L~L~ 167 (386)
T 2ca6_A 110 AQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKI----------------------ARALQELAVNKKAKNAPPLRSIICG 167 (386)
T ss_dssp THHHHHHHHHHCTTCCEEECCSSCCHHHHHHHH----------------------HHHHHHHHHHHHHHTCCCCCEEECC
T ss_pred HHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHH----------------------HHHHHHHhhhhhcccCCCCcEEECC
Confidence 245556666666666666666643222222 1222222 677777777
Q ss_pred Ccccc-CCCC---ccccCCCccCeeecccccccC-----CCCCCCCCccccceeeccccccc----CccccccccCCCCC
Q 046275 433 FNYLT-GTIP---SSLGSLSKLQDLKLWLNQLHG-----EIPPELGNIQTLETLFLDFNELT----GTLPAALSNCTNLN 499 (1176)
Q Consensus 433 ~N~l~-~~~p---~~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~ 499 (1176)
+|+++ +.+| ..+..+++|+.|+|++|+++. ..|..+..+++|++|+|++|.|+ +.+|..+..+++|+
T Consensus 168 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~ 247 (386)
T 2ca6_A 168 RNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLR 247 (386)
T ss_dssp SSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCC
T ss_pred CCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcC
Confidence 77775 3344 355667777777777777762 34447778888888888888885 56788888888999
Q ss_pred eeeccccccCCC----CCccc--cCCCCCCeEEccCCcccc----cCCCCC-CCCCCCCEEEccCCCCcccCC
Q 046275 500 WISLSNNHLGGE----IPTWI--GQLSNLAILKLSNNSFYG----RIPPEL-GDCRSLIWLDLNTNLFNGSIP 561 (1176)
Q Consensus 500 ~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~g~ip 561 (1176)
+|+|++|++++. +|..+ +.+++|++|+|++|.+++ .+|..+ .++++|+.|+|++|++++..|
T Consensus 248 ~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 248 ELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp EEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred EEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 999999988765 56666 348899999999999987 477777 568999999999999987665
No 343
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=4.9e-21 Score=209.64 Aligned_cols=89 Identities=24% Similarity=0.206 Sum_probs=51.1
Q ss_pred CccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCccccccccccccc
Q 046275 637 SMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLC 716 (1176)
Q Consensus 637 ~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls 716 (1176)
+|++|+|++|+|++..|..|+.+++|+.|+|++|+|++..|..|+.+++|++|+|++|+|++..|..+..+++|+.|+|+
T Consensus 108 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 187 (251)
T 3m19_A 108 QLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLF 187 (251)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEee
Confidence 44555555555554444445556666666666666664444456666666666666666665545556666666666666
Q ss_pred cccccCCCC
Q 046275 717 NNQLTGMIP 725 (1176)
Q Consensus 717 ~N~l~g~~p 725 (1176)
+|++++..+
T Consensus 188 ~N~~~c~~~ 196 (251)
T 3m19_A 188 GNQFDCSRC 196 (251)
T ss_dssp SCCBCTTST
T ss_pred CCceeCCcc
Confidence 666665533
No 344
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=1.1e-21 Score=237.51 Aligned_cols=189 Identities=27% Similarity=0.335 Sum_probs=121.5
Q ss_pred cCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeecc
Q 046275 425 QLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLS 504 (1176)
Q Consensus 425 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 504 (1176)
+|+.|+|++|.+++ +|..+. ++|++|+|++|+++ .+| ..+++|++|+|++|+|++ +|. |.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 56666666666664 454442 55666666666666 455 335666666666666664 444 444 67777777
Q ss_pred ccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceeee
Q 046275 505 NNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYI 584 (1176)
Q Consensus 505 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~ 584 (1176)
+|+|++ +|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|++++ +|. |
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~--l------------------- 178 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE--L------------------- 178 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC--C-------------------
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch--h-------------------
Confidence 777764 554 46677777777777764 554 45667777777777664 443 1
Q ss_pred ecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccc--
Q 046275 585 KNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYL-- 662 (1176)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L-- 662 (1176)
. .+|++|||++|+|+ .+|. |+. +|
T Consensus 179 ------------------------------------------------~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~ 204 (571)
T 3cvr_A 179 ------------------------------------------------P--ESLEALDVSTNLLE-SLPA-VPV--RNHH 204 (571)
T ss_dssp ------------------------------------------------C--TTCCEEECCSSCCS-SCCC-CC-------
T ss_pred ------------------------------------------------h--CCCCEEECcCCCCC-chhh-HHH--hhhc
Confidence 0 24666777777777 5666 554 56
Q ss_pred -----eeeeccCccccccCCccccCcCcccEEEccCccccccCCCCcccccc
Q 046275 663 -----FILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTL 709 (1176)
Q Consensus 663 -----~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~ 709 (1176)
+.|+|++|+|+ .||..++.+++|+.|+|++|+|+|.+|..+..++.
T Consensus 205 ~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 205 SEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp ---CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred ccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 77888888887 67877777888888888888888888877776654
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=2.5e-21 Score=218.63 Aligned_cols=193 Identities=19% Similarity=0.264 Sum_probs=98.0
Q ss_pred CCCCCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCcccccccCCCCCccc
Q 046275 142 GSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGDINVSKCKNLQ 221 (1176)
Q Consensus 142 ~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~~~~~~l~~L~ 221 (1176)
..+++|++|++++|.|+.++ .+..+++|++|+|++|+++++ +. |..+++|++|+|++|.+++...+..+++|+
T Consensus 38 ~~l~~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~~---~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~ 110 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDL---AP--LKNLTKITELELSGNPLKNVSAIAGLQSIK 110 (308)
T ss_dssp HHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCC---GG--GTTCCSCCEEECCSCCCSCCGGGTTCTTCC
T ss_pred HHcCCcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCCC---hh--HccCCCCCEEEccCCcCCCchhhcCCCCCC
Confidence 34445555555555555443 234445555555555555542 21 344444444444444444433344444555
Q ss_pred eeeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCC
Q 046275 222 FLDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCS 301 (1176)
Q Consensus 222 ~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~ 301 (1176)
+|++++|+++++++ +..+++|++|++++|++++..+ +..++
T Consensus 111 ~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~------------------------------------ 151 (308)
T 1h6u_A 111 TLDLTSTQITDVTP-LAGLSNLQVLYLDLNQITNISP--LAGLT------------------------------------ 151 (308)
T ss_dssp EEECTTSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCT------------------------------------
T ss_pred EEECCCCCCCCchh-hcCCCCCCEEECCCCccCcCcc--ccCCC------------------------------------
Confidence 55555555544322 4445555555555555544332 44444
Q ss_pred CccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEc
Q 046275 302 SLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDL 381 (1176)
Q Consensus 302 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 381 (1176)
+|++|+|++|++++.. . +..+++|++|++++|+++ .++. +..+++|++|+|++|.+++.. .+..+++|+.|+|
T Consensus 152 ~L~~L~l~~n~l~~~~-~-l~~l~~L~~L~l~~n~l~-~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l 224 (308)
T 1h6u_A 152 NLQYLSIGNAQVSDLT-P-LANLSKLTTLKADDNKIS-DISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTL 224 (308)
T ss_dssp TCCEEECCSSCCCCCG-G-GTTCTTCCEEECCSSCCC-CCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEE
T ss_pred CccEEEccCCcCCCCh-h-hcCCCCCCEEECCCCccC-cChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEc
Confidence 4444555555444322 2 555566666666666665 3332 455666666666666666433 2566666666666
Q ss_pred cCCcCC
Q 046275 382 SSNNLS 387 (1176)
Q Consensus 382 s~N~l~ 387 (1176)
++|+++
T Consensus 225 ~~N~i~ 230 (308)
T 1h6u_A 225 TNQTIT 230 (308)
T ss_dssp EEEEEE
T ss_pred cCCeee
Confidence 666665
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=3.3e-21 Score=222.05 Aligned_cols=223 Identities=18% Similarity=0.200 Sum_probs=125.0
Q ss_pred cCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCC-CCCCCccccce-eecccccccCccccccccCCCCCeee
Q 046275 425 QLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIP-PELGNIQTLET-LFLDFNELTGTLPAALSNCTNLNWIS 502 (1176)
Q Consensus 425 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~ 502 (1176)
++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|.+ +.++.|+|++..|..|.++++|++|+
T Consensus 31 ~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~ 110 (350)
T 4ay9_X 31 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 110 (350)
T ss_dssp TCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEE
T ss_pred CCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccc
Confidence 44444455554443223344455555555555555443333 23455555443 44455666655566666666666666
Q ss_pred ccccccCCCCCccccCCCCCCeEEccC-CcccccCCCCCCCCC-CCCEEEccCCCCcccCChhHHhhcccchhhhccccc
Q 046275 503 LSNNHLGGEIPTWIGQLSNLAILKLSN-NSFYGRIPPELGDCR-SLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKK 580 (1176)
Q Consensus 503 Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~ 580 (1176)
+++|++++..+..+....++..|++.+ |++....+..|..+. .++.|+|++|+++ .||+..|.
T Consensus 111 l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~-------------- 175 (350)
T 4ay9_X 111 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFN-------------- 175 (350)
T ss_dssp EEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSST--------------
T ss_pred ccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhcc--------------
Confidence 666666655555555555666666644 445544444555553 4667777777776 34433321
Q ss_pred eeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEccc-CcCccCCC-ccccc
Q 046275 581 YVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISY-NMLSGSIP-KEIGS 658 (1176)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~-N~l~g~iP-~~~~~ 658 (1176)
..+|+.|++++ |.++ .|| ..|++
T Consensus 176 ------------------------------------------------------~~~L~~l~l~~~n~l~-~i~~~~f~~ 200 (350)
T 4ay9_X 176 ------------------------------------------------------GTQLDELNLSDNNNLE-ELPNDVFHG 200 (350)
T ss_dssp ------------------------------------------------------TEEEEEEECTTCTTCC-CCCTTTTTT
T ss_pred ------------------------------------------------------ccchhHHhhccCCccc-CCCHHHhcc
Confidence 12356677764 4444 455 45677
Q ss_pred cccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCcccccccccccccccccc
Q 046275 659 MSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLCNNQLT 721 (1176)
Q Consensus 659 l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls~N~l~ 721 (1176)
+++|+.|+|++|+|+ .+|.. .+.+|+.|.+.++.--..+|. +.++++|+.++++++.-+
T Consensus 201 l~~L~~LdLs~N~l~-~lp~~--~~~~L~~L~~l~~~~l~~lP~-l~~l~~L~~l~l~~~~~c 259 (350)
T 4ay9_X 201 ASGPVILDISRTRIH-SLPSY--GLENLKKLRARSTYNLKKLPT-LEKLVALMEASLTYPSHC 259 (350)
T ss_dssp EECCSEEECTTSCCC-CCCSS--SCTTCCEEECTTCTTCCCCCC-TTTCCSCCEEECSCHHHH
T ss_pred CcccchhhcCCCCcC-ccChh--hhccchHhhhccCCCcCcCCC-chhCcChhhCcCCCCccc
Confidence 788888888888887 55542 244555555444333336773 777778888888766543
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=5.4e-21 Score=202.88 Aligned_cols=135 Identities=22% Similarity=0.204 Sum_probs=80.0
Q ss_pred ccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeec
Q 046275 424 SQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISL 503 (1176)
Q Consensus 424 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 503 (1176)
++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 35555666666555444444555555556665555555444444555666666666666666555555666666666666
Q ss_pred cccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcc
Q 046275 504 SNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNG 558 (1176)
Q Consensus 504 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g 558 (1176)
++|++++..+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|++.|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 6666665555556666666666666666664444446666666666666666554
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.84 E-value=3.2e-22 Score=229.55 Aligned_cols=253 Identities=17% Similarity=0.182 Sum_probs=119.8
Q ss_pred CcEEEcCCCcCCCCcChhhhcc--ccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCcc
Q 046275 243 LEYLDISANKFTGDVGHAISAC--EHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSR 320 (1176)
Q Consensus 243 L~~L~Ls~N~l~~~~~~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~ 320 (1176)
++.|++++|.+. +..+..+ ++++.|++++|.+++..+ .
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~------------------------------------~- 88 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLA------------------------------------E- 88 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCC------------------------------------S-
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccch------------------------------------h-
Confidence 567777777665 3445555 556666666555553322 2
Q ss_pred ccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCC-cCCCC-CCccccCCC
Q 046275 321 FGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSN-NLSGA-IPHNLCQGP 398 (1176)
Q Consensus 321 ~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~~-~p~~~~~~~ 398 (1176)
+..+++|++|++++|.+++......+..+++|++|+|++|.+++..+..++.+++|++|+|++| .+++. ++..+ ..
T Consensus 89 ~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~--~~ 166 (336)
T 2ast_B 89 HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLL--SS 166 (336)
T ss_dssp CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHH--HH
T ss_pred hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHH--hc
Confidence 2334445555555554442211122344455555555555544444444444555555555555 33321 22211 11
Q ss_pred CCCccEEEccCc-cccCC-CCccccccc-cCcEEEcCCc--ccc-CCCCccccCCCccCeeeccccc-ccCCCCCCCCCc
Q 046275 399 RNSLKELFLQNN-LLLGS-IPSTLSNCS-QLVSLHLSFN--YLT-GTIPSSLGSLSKLQDLKLWLNQ-LHGEIPPELGNI 471 (1176)
Q Consensus 399 ~~~L~~L~L~~N-~l~~~-~p~~l~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l 471 (1176)
+++|++|++++| .+++. ++..+..++ +|++|++++| .++ +.+|..+..+++|+.|++++|. +++..+..+..+
T Consensus 167 ~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l 246 (336)
T 2ast_B 167 CSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL 246 (336)
T ss_dssp CTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGC
T ss_pred CCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCC
Confidence 233444444444 44332 344455556 6666666666 333 3344455555555555555555 444445555555
Q ss_pred cccceeeccccc-ccCccccccccCCCCCeeeccccccCCCCCccccCC-CCCCeEEccCCcccccCCCCCC
Q 046275 472 QTLETLFLDFNE-LTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQL-SNLAILKLSNNSFYGRIPPELG 541 (1176)
Q Consensus 472 ~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~ 541 (1176)
++|++|+|++|. ++......+.++++|+.|++++| ++.. .+..+ ..|..|++++|++++..|+.++
T Consensus 247 ~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 247 NYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp TTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred CCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCCccc
Confidence 555555555553 22111123455555555555555 2211 12222 1244444555555555554444
No 349
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.84 E-value=7.7e-21 Score=214.63 Aligned_cols=210 Identities=25% Similarity=0.370 Sum_probs=127.7
Q ss_pred cEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccC
Q 046275 304 VKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSS 383 (1176)
Q Consensus 304 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 383 (1176)
..+.+..+.+++.+ .+..+++|++|++++|.++ .++ .+..+++|++|+|++|.+++..+ +..+++|++|+|++
T Consensus 22 ~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~l~--~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~ 94 (308)
T 1h6u_A 22 IKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIE--GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSG 94 (308)
T ss_dssp HHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCS
T ss_pred HHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCcc-Cch--hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccC
Confidence 33455566665432 2445677777777777776 555 25667777777777777774433 67777777777777
Q ss_pred CcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCC
Q 046275 384 NNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGE 463 (1176)
Q Consensus 384 N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 463 (1176)
|++++ ++ .+..+++|++|++++|++++ ++. +..+++|++|++++|.+++.
T Consensus 95 n~l~~-~~---------------------------~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~ 144 (308)
T 1h6u_A 95 NPLKN-VS---------------------------AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNI 144 (308)
T ss_dssp CCCSC-CG---------------------------GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCC
T ss_pred CcCCC-ch---------------------------hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcC
Confidence 76653 22 24444555555555555553 222 55555555555555555533
Q ss_pred CCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCC
Q 046275 464 IPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDC 543 (1176)
Q Consensus 464 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 543 (1176)
.+ ++.+++|++|+|++|++++..+ +.++++|+.|++++|++++..+ +..+++|++|+|++|++++..| +..+
T Consensus 145 ~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l 216 (308)
T 1h6u_A 145 SP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANT 216 (308)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTC
T ss_pred cc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCC
Confidence 22 5566666666666666664333 6666677777777777764332 6667777777777777764332 6677
Q ss_pred CCCCEEEccCCCCcc
Q 046275 544 RSLIWLDLNTNLFNG 558 (1176)
Q Consensus 544 ~~L~~L~L~~N~l~g 558 (1176)
++|+.|+|++|++++
T Consensus 217 ~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 217 SNLFIVTLTNQTITN 231 (308)
T ss_dssp TTCCEEEEEEEEEEC
T ss_pred CCCCEEEccCCeeec
Confidence 777777777777753
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=7.1e-21 Score=219.28 Aligned_cols=244 Identities=20% Similarity=0.206 Sum_probs=151.8
Q ss_pred CeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHh
Q 046275 268 SFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFL 347 (1176)
Q Consensus 268 ~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~ 347 (1176)
++++.++++++ ++|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|...|.
T Consensus 12 ~~v~C~~~~Lt------------~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~ 76 (350)
T 4ay9_X 12 RVFLCQESKVT------------EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFS 76 (350)
T ss_dssp TEEEEESTTCC------------SCCTTC---CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBC
T ss_pred CEEEecCCCCC------------ccCcCc---CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhh
Confidence 56777777776 233222 257888888888888555567888888999999988887678888888
Q ss_pred cCCCCCE-EEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccC
Q 046275 348 SMSNLKE-LVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQL 426 (1176)
Q Consensus 348 ~l~~L~~-L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L 426 (1176)
+++++++ +.++.|+++...|..|.++++|++|++++|+++...+..+ ....++..|++.++
T Consensus 77 ~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~--~~~~~l~~l~l~~~---------------- 138 (350)
T 4ay9_X 77 NLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHK--IHSLQKVLLDIQDN---------------- 138 (350)
T ss_dssp SCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTT--CCBSSCEEEEEESC----------------
T ss_pred cchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhh--cccchhhhhhhccc----------------
Confidence 8888765 5666788887777888888888888888888874332222 11223444444321
Q ss_pred cEEEcCCccccCCCCccccCCC-ccCeeecccccccCCCCCCCCCccccceeeccc-ccccCccccccccCCCCCeeecc
Q 046275 427 VSLHLSFNYLTGTIPSSLGSLS-KLQDLKLWLNQLHGEIPPELGNIQTLETLFLDF-NELTGTLPAALSNCTNLNWISLS 504 (1176)
Q Consensus 427 ~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls 504 (1176)
|+++...+..|..+. .++.|+|++|+++ .+|.......+|++|++++ |.++...+..|.++++|++|||+
T Consensus 139 -------~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs 210 (350)
T 4ay9_X 139 -------INIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDIS 210 (350)
T ss_dssp -------TTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECT
T ss_pred -------cccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcC
Confidence 233322223333332 3455555555555 3333333445666666653 55554444566777777777777
Q ss_pred ccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCC
Q 046275 505 NNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLF 556 (1176)
Q Consensus 505 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 556 (1176)
+|+|+. +|.. .+.+|+.|.+.++.-...+| .+.++++|+.++++++.-
T Consensus 211 ~N~l~~-lp~~--~~~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~~ 258 (350)
T 4ay9_X 211 RTRIHS-LPSY--GLENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYPSH 258 (350)
T ss_dssp TSCCCC-CCSS--SCTTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHHH
T ss_pred CCCcCc-cChh--hhccchHhhhccCCCcCcCC-CchhCcChhhCcCCCCcc
Confidence 777773 3332 24455555544443333666 477788888888875543
No 351
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=3.5e-21 Score=213.81 Aligned_cols=153 Identities=15% Similarity=0.099 Sum_probs=123.0
Q ss_pred HHHHHHHhcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCc------------------CHHHHHHHHHHHHhc
Q 046275 852 FADLLEATNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQ------------------GDREFTAEMETIGKI 913 (1176)
Q Consensus 852 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l 913 (1176)
...+......|.+.+.||+|+||.||+|++.+|+.||+|.+...... ....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 44455566678888999999999999999977999999988532211 234588999999999
Q ss_pred CCCCcccceeEEeeCCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCC
Q 046275 914 KHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSN 993 (1176)
Q Consensus 914 ~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 993 (1176)
+ | +++.+++.. +..|+||||++||+|.+ +.. .....++.|++.||+|||+. +|+||||||+|
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~N 223 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYN 223 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHH
Confidence 9 5 777776544 55699999999999988 421 12346999999999999999 99999999999
Q ss_pred EEECCCCcEEEEeeccccccccccccccccccccCCcccCccccC
Q 046275 994 VLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQ 1038 (1176)
Q Consensus 994 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 1038 (1176)
|+++ ++.+||+|||+|+. +..|+|||++.
T Consensus 224 ILl~-~~~vkl~DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 224 VLVS-EEGIWIIDFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp EEEE-TTEEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred EEEE-CCcEEEEECCCCeE---------------CCCCCHHHHHH
Confidence 9999 99999999999862 34578999874
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=4.6e-20 Score=223.25 Aligned_cols=186 Identities=27% Similarity=0.341 Sum_probs=138.1
Q ss_pred CCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEE
Q 046275 351 NLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLH 430 (1176)
Q Consensus 351 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 430 (1176)
+|++|+|++|.+++ +|..+. ++|++|+|++|+|+ .+| . .+++|+.|+|++|+|++ +|. +.+ +|++|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip-~----~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~ 126 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP-E----LPASLEYLDACDNRLST-LPE-LPA--SLKHLD 126 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC-C----CCTTCCEEECCSSCCSC-CCC-CCT--TCCEEE
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc-c----ccCCCCEEEccCCCCCC-cch-hhc--CCCEEE
Confidence 67777777777764 555442 56777777777776 555 2 24567777777777775 555 544 778888
Q ss_pred cCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCC
Q 046275 431 LSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGG 510 (1176)
Q Consensus 431 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 510 (1176)
|++|+|++ +|. .+++|+.|+|++|.+++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+
T Consensus 127 Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~- 193 (571)
T 3cvr_A 127 VDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE- 193 (571)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-
T ss_pred CCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-
Confidence 88888775 555 56778888888888875 555 46788888888888886 555 65 78888899998888
Q ss_pred CCCccccCCCCC-------CeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHh
Q 046275 511 EIPTWIGQLSNL-------AILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFK 566 (1176)
Q Consensus 511 ~~p~~~~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~ 566 (1176)
.+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+++|.+|..+..
T Consensus 194 ~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 194 SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 6676 554 67 99999999998 78998889999999999999999988887654
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=5.7e-20 Score=194.98 Aligned_cols=128 Identities=20% Similarity=0.212 Sum_probs=64.8
Q ss_pred cEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeecccc
Q 046275 427 VSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNN 506 (1176)
Q Consensus 427 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 506 (1176)
+.++.+++.++ .+|..+ .++|++|++++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 35566666665 344333 235555555555555444444555555555555555555444444555555555555555
Q ss_pred ccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCc
Q 046275 507 HLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFN 557 (1176)
Q Consensus 507 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 557 (1176)
++++..+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|+++
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 137 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK 137 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc
Confidence 555444444455555555555555554333333444444444444444443
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=6.7e-19 Score=188.18 Aligned_cols=160 Identities=19% Similarity=0.171 Sum_probs=130.8
Q ss_pred EEEccCccccCCCCccccccccCcEEEcCCccccCCCC-ccccCCCccCeeecccccccCCCCCCCCCccccceeecccc
Q 046275 404 ELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIP-SSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFN 482 (1176)
Q Consensus 404 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 482 (1176)
.+++++|.++ .+|..+. ..+++|+|++|++++..| ..|..+++|+.|+|++|++++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 5555555555 3444442 345677777777776544 34677888888888888888777778888899999999999
Q ss_pred cccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCCh
Q 046275 483 ELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPP 562 (1176)
Q Consensus 483 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~ 562 (1176)
+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++..|..|..+++|+.|+|++|+++|.++-
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 99988888899999999999999999988899999999999999999999988899999999999999999999998876
Q ss_pred hHHh
Q 046275 563 ALFK 566 (1176)
Q Consensus 563 ~~~~ 566 (1176)
..+.
T Consensus 172 ~~l~ 175 (220)
T 2v70_A 172 AWLG 175 (220)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=1.2e-18 Score=186.30 Aligned_cols=160 Identities=19% Similarity=0.226 Sum_probs=126.8
Q ss_pred cEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccc
Q 046275 403 KELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFN 482 (1176)
Q Consensus 403 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 482 (1176)
+.++++++.++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 34555555555 3444443 56777777777777666667777778888888888887777888888888888888888
Q ss_pred cccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCCh
Q 046275 483 ELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPP 562 (1176)
Q Consensus 483 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~ 562 (1176)
+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++.+..+-
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l 170 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHL 170 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCcc
Confidence 88866667788899999999999999988888899999999999999999977777899999999999999999886654
Q ss_pred hHH
Q 046275 563 ALF 565 (1176)
Q Consensus 563 ~~~ 565 (1176)
.++
T Consensus 171 ~~l 173 (220)
T 2v9t_B 171 KWL 173 (220)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 356
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=4.8e-18 Score=182.77 Aligned_cols=156 Identities=24% Similarity=0.197 Sum_probs=128.5
Q ss_pred ccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeeccc
Q 046275 402 LKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDF 481 (1176)
Q Consensus 402 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 481 (1176)
.+.++++++.++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+++...+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 345666666665 4454443 6778888888888877777788888888888888888765566778888899999999
Q ss_pred ccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCC
Q 046275 482 NELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIP 561 (1176)
Q Consensus 482 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip 561 (1176)
|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|++++..+..|..+++|+.|+|++|++.+.++
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9998777778899999999999999998 788889999999999999999997666789999999999999999998876
No 357
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=4.7e-21 Score=233.42 Aligned_cols=85 Identities=27% Similarity=0.341 Sum_probs=37.9
Q ss_pred ccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccccC-CCCccccccccccccc
Q 046275 638 MMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTI-PSSMSSLTLLNEIDLC 716 (1176)
Q Consensus 638 l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~i-P~~l~~l~~L~~l~ls 716 (1176)
|+.|||++|+|+ .+|..|+++++|+.|+|++|+|++ +| .|+.|++|+.|+|++|+|++.+ |..++.+++|+.|+|+
T Consensus 465 L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~ 541 (567)
T 1dce_A 465 VTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQ 541 (567)
T ss_dssp CCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECT
T ss_pred CcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEec
Confidence 334444444444 344444444444444444444442 33 4444444444444444444333 4444444444444444
Q ss_pred cccccCCCC
Q 046275 717 NNQLTGMIP 725 (1176)
Q Consensus 717 ~N~l~g~~p 725 (1176)
+|+|++.+|
T Consensus 542 ~N~l~~~~~ 550 (567)
T 1dce_A 542 GNSLCQEEG 550 (567)
T ss_dssp TSGGGGSSS
T ss_pred CCcCCCCcc
Confidence 444444444
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=6.7e-19 Score=215.65 Aligned_cols=200 Identities=22% Similarity=0.325 Sum_probs=116.9
Q ss_pred ccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeec
Q 046275 424 SQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISL 503 (1176)
Q Consensus 424 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 503 (1176)
..+..+.++.+.+.+..+ +..+++|+.|++++|.+. .+| .+..+++|+.|+|++|+|++..| +.++++|+.|+|
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 344455555555553322 345556666666666665 233 35666666666666666665444 666666666666
Q ss_pred cccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHhhcccchhhhccccceee
Q 046275 504 SNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVY 583 (1176)
Q Consensus 504 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~ 583 (1176)
++|+|++ +| .+..+++|+.|+|++|++.+ + +.+..|++|+.|+|++|.+++. +
T Consensus 95 s~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~---------------------- 147 (605)
T 1m9s_A 95 DENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-T---------------------- 147 (605)
T ss_dssp CSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-G----------------------
T ss_pred cCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-h----------------------
Confidence 6666663 33 46666666666666666663 2 3466666666666666666531 0
Q ss_pred eecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEcccCcCccCCCccccccccce
Q 046275 584 IKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLF 663 (1176)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~ 663 (1176)
.+..+.+|+.|+|++|+|++.+| ++.+++|+
T Consensus 148 -----------------------------------------------~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~ 178 (605)
T 1m9s_A 148 -----------------------------------------------VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQ 178 (605)
T ss_dssp -----------------------------------------------GGGSCTTCSEEECCSSCCCCCGG--GTTCTTCC
T ss_pred -----------------------------------------------hhcccCCCCEEECcCCcCCCchh--hccCCCCC
Confidence 01223456666777777665545 66667777
Q ss_pred eeeccCccccccCCccccCcCcccEEEccCccccccCCCCcccc
Q 046275 664 ILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSL 707 (1176)
Q Consensus 664 ~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l 707 (1176)
.|+|++|+|++ +| .++.|++|+.|+|++|++++.....+..+
T Consensus 179 ~L~Ls~N~i~~-l~-~l~~l~~L~~L~L~~N~l~~~p~~~~~~l 220 (605)
T 1m9s_A 179 NLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNKPINHQSNL 220 (605)
T ss_dssp EEECCSSCCCB-CG-GGTTCTTCSEEECCSEEEECCCCCCCSSC
T ss_pred EEECcCCCCCC-Ch-HHccCCCCCEEEccCCcCcCCcccccccE
Confidence 77777777764 33 46667777777777777765433333333
No 359
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=2.3e-19 Score=225.56 Aligned_cols=131 Identities=25% Similarity=0.275 Sum_probs=99.9
Q ss_pred EcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccC
Q 046275 430 HLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLG 509 (1176)
Q Consensus 430 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 509 (1176)
+++.|++. ..|..+..++.|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|.++++|++|+|++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 44555555 55667777777777777777777 66767777888888888888888 78888899999999999999998
Q ss_pred CCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHH
Q 046275 510 GEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALF 565 (1176)
Q Consensus 510 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~ 565 (1176)
.+|..|+.+++|++|+|++|.|+ .+|..|+.|++|+.|+|++|+|+|.+|..++
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 337 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILT 337 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHH
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHh
Confidence 78989999999999999999997 8888899999999999999999988777654
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=6.5e-19 Score=203.68 Aligned_cols=180 Identities=24% Similarity=0.197 Sum_probs=141.5
Q ss_pred CEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCcccc-ccccCcEEEcCCccccCCCCccccCCCccCeeec
Q 046275 377 ETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLS-NCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKL 455 (1176)
Q Consensus 377 ~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 455 (1176)
+.+++++|.++ .+|..+ ...++.|+|++|++++..+..+. ++++|++|+|++|+|++..|..|..+++|++|+|
T Consensus 21 ~~l~c~~~~l~-~iP~~~----~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 95 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSL----PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDL 95 (361)
T ss_dssp TEEECCSSCCS-SCCSSC----CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEEEeCCCCcC-ccCccC----CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEEC
Confidence 56777777776 466544 23577788888888776667776 8888888888888888777778888888888888
Q ss_pred ccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccc---cCCCCCCeEEccCCcc
Q 046275 456 WLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWI---GQLSNLAILKLSNNSF 532 (1176)
Q Consensus 456 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~N~l 532 (1176)
++|++++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|
T Consensus 96 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 96 SSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCC
T ss_pred CCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCC
Confidence 8888887777788888999999999999988778889999999999999999985444444 5688999999999999
Q ss_pred cccCCCCCCCCCC--CCEEEccCCCCcccCC
Q 046275 533 YGRIPPELGDCRS--LIWLDLNTNLFNGSIP 561 (1176)
Q Consensus 533 ~~~~p~~~~~l~~--L~~L~L~~N~l~g~ip 561 (1176)
++..+..+..++. |+.|+|++|++.+...
T Consensus 176 ~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 176 KKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 8555566777776 4889999999987543
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=2.9e-18 Score=210.10 Aligned_cols=187 Identities=22% Similarity=0.290 Sum_probs=98.9
Q ss_pred EEEeCCCcccccccCCCCCccceeeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccC
Q 046275 200 QLALKGNKVTGDINVSKCKNLQFLDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSG 279 (1176)
Q Consensus 200 ~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 279 (1176)
.+.+..+.+.+...+..+++|+.|++++|.+..++ .+..+++|++|+|++|+|++..+ +..+++|+.|+|++|.|+
T Consensus 25 ~l~l~~~~i~~~~~~~~L~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~- 100 (605)
T 1m9s_A 25 KDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIK- 100 (605)
T ss_dssp HHHTTCSCTTSEECHHHHTTCCCCBCTTCCCCCCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCC-
T ss_pred HHhccCCCcccccchhcCCCCCEEECcCCCCCCCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCC-
Confidence 33444444444444445556666666666655443 35555666666666666555443 555555555555555544
Q ss_pred ccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccC
Q 046275 280 PIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSF 359 (1176)
Q Consensus 280 ~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~ 359 (1176)
+ + +.+..+++|++|+|++|+++ .++ .+..+++|+.|+|++
T Consensus 101 -----------------------------------~-l-~~l~~l~~L~~L~Ls~N~l~-~l~--~l~~l~~L~~L~Ls~ 140 (605)
T 1m9s_A 101 -----------------------------------D-L-SSLKDLKKLKSLSLEHNGIS-DIN--GLVHLPQLESLYLGN 140 (605)
T ss_dssp -----------------------------------C-C-TTSTTCTTCCEEECTTSCCC-CCG--GGGGCTTCSEEECCS
T ss_pred -----------------------------------C-C-hhhccCCCCCEEEecCCCCC-CCc--cccCCCccCEEECCC
Confidence 2 1 24555555666666666555 232 245556666666666
Q ss_pred cccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccC
Q 046275 360 NDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTG 438 (1176)
Q Consensus 360 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 438 (1176)
|.+++. ..+..+++|+.|+|++|.+++..| + ..+++|+.|+|++|++++. ..+..+++|+.|+|++|++.+
T Consensus 141 N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l--~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 141 NKITDI--TVLSRLTKLDTLSLEDNQISDIVP--L--AGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp SCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--G--TTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CccCCc--hhhcccCCCCEEECcCCcCCCchh--h--ccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 665543 445555666666666665554333 2 2344455555555555432 235566666666666666654
No 362
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=3.2e-18 Score=182.85 Aligned_cols=154 Identities=23% Similarity=0.278 Sum_probs=123.9
Q ss_pred CEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCC-ccccccccCcEEEcCCccccCCCCccccCCCccCeeec
Q 046275 377 ETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIP-STLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKL 455 (1176)
Q Consensus 377 ~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 455 (1176)
+.+++++|.++ .+|..+ ...+++|+|++|++++..| ..|..+++|++|+|++|++++..+..|..+++|++|+|
T Consensus 14 ~~l~~s~n~l~-~iP~~~----~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 88 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHI----PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 88 (220)
T ss_dssp TEEECCSSCCS-SCCSCC----CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEeEeCCCCcc-cCccCC----CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEEC
Confidence 46677777766 456544 2346777777777776544 45778888888888888888777778888888888888
Q ss_pred ccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCccccc
Q 046275 456 WLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGR 535 (1176)
Q Consensus 456 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 535 (1176)
++|++++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+.+.
T Consensus 89 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 89 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 88888877777788888899999999999888888888899999999999999888888888899999999999988754
No 363
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=3.4e-19 Score=224.03 Aligned_cols=225 Identities=23% Similarity=0.233 Sum_probs=119.2
Q ss_pred CccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecc
Q 046275 401 SLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLD 480 (1176)
Q Consensus 401 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 480 (1176)
.++.|.|.+|.+.. .+. ..|+.++|+.|.|.+ ++++.|.+. ..|..+..++.|+.|+|+
T Consensus 174 ~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls 232 (727)
T 4b8c_D 174 LTPKIELFANGKDE-ANQ-----ALLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDLS 232 (727)
T ss_dssp ---------------------------------------------------------------------CCCCCCEEECT
T ss_pred ccceEEeeCCCCCc-chh-----hHhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEECC
Confidence 35555665555553 121 235556666666652 345566666 678888899999999999
Q ss_pred cccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccC
Q 046275 481 FNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSI 560 (1176)
Q Consensus 481 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~i 560 (1176)
+|+++ .+|..+.++++|++|+|++|+|+ .+|..|+.+++|++|+|++|.|+ .+|..|+.|++|++|+|++|.|+ .|
T Consensus 233 ~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~l 308 (727)
T 4b8c_D 233 NLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TL 308 (727)
T ss_dssp TSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CC
T ss_pred CCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-cc
Confidence 99998 67777778999999999999998 88888999999999999999998 78999999999999999999886 56
Q ss_pred ChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccE
Q 046275 561 PPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMF 640 (1176)
Q Consensus 561 p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 640 (1176)
|.. |..+.+|++
T Consensus 309 p~~--------------------------------------------------------------------~~~l~~L~~ 320 (727)
T 4b8c_D 309 PWE--------------------------------------------------------------------FGNLCNLQF 320 (727)
T ss_dssp CSS--------------------------------------------------------------------TTSCTTCCC
T ss_pred Chh--------------------------------------------------------------------hhcCCCccE
Confidence 643 223456888
Q ss_pred EEcccCcCccCCCccccccccc-eeeeccCccccccCCccccCcCcccEEEccCc--------cccccCCCCcccccccc
Q 046275 641 LDISYNMLSGSIPKEIGSMSYL-FILNLGHNNLSGPIPTEVGDLRGLNILDLSSN--------RLEGTIPSSMSSLTLLN 711 (1176)
Q Consensus 641 LdLs~N~l~g~iP~~~~~l~~L-~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N--------~l~g~iP~~l~~l~~L~ 711 (1176)
|+|++|.|+|.+|..++.+... ..|+|++|.++|.+|.. |+.|++++| .|.+.++..+.++..+.
T Consensus 321 L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~ 394 (727)
T 4b8c_D 321 LGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRT 394 (727)
T ss_dssp EECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------------------------------------
T ss_pred EeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccc
Confidence 9999999999888888765433 35789999999888864 456667777 44444555556677777
Q ss_pred ccccccccccCCC
Q 046275 712 EIDLCNNQLTGMI 724 (1176)
Q Consensus 712 ~l~ls~N~l~g~~ 724 (1176)
...+++|-+++..
T Consensus 395 ~~~ls~Nil~~~~ 407 (727)
T 4b8c_D 395 FTVLSYNTLCQHY 407 (727)
T ss_dssp -------CCCGGG
T ss_pred eeeeecccccccc
Confidence 7777777776543
No 364
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=2.1e-20 Score=227.76 Aligned_cols=214 Identities=20% Similarity=0.150 Sum_probs=130.2
Q ss_pred CCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceee-
Q 046275 400 NSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLF- 478 (1176)
Q Consensus 400 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~- 478 (1176)
++|+.|+|++|+++ .+|..++++++|+.|++++|.....+|.. +..+.+.+.+|..++.+++|+.|+
T Consensus 349 ~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l-----------l~~~~~~~~~~~~l~~l~~L~~L~~ 416 (567)
T 1dce_A 349 EQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL-----------MRALDPLLYEKETLQYFSTLKAVDP 416 (567)
T ss_dssp TTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----------HHHHCTGGGHHHHHHHHHHHHHHCG
T ss_pred ccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH-----------HHhcccccCCHHHHHHHHhcccCcc
Confidence 34444444444444 44555555555555555444311011100 001123445566666666666666
Q ss_pred cccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcc
Q 046275 479 LDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNG 558 (1176)
Q Consensus 479 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g 558 (1176)
++.|.+. +|..+.+++|.++. +|. ..|+.|+|++|.|++ +|. ++.+++|+.|+|++|.++
T Consensus 417 l~~n~~~-----------~L~~l~l~~n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~- 476 (567)
T 1dce_A 417 MRAAYLD-----------DLRSKFLLENSVLK-MEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR- 476 (567)
T ss_dssp GGHHHHH-----------HHHHHHHHHHHHHH-HHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-
T ss_pred hhhcccc-----------hhhhhhhhcccccc-cCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-
Confidence 5555443 44555666666652 221 247777777777774 565 777777777777777776
Q ss_pred cCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCc
Q 046275 559 SIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSM 638 (1176)
Q Consensus 559 ~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 638 (1176)
.+|..+. .+.+|
T Consensus 477 ~lp~~~~--------------------------------------------------------------------~l~~L 488 (567)
T 1dce_A 477 ALPPALA--------------------------------------------------------------------ALRCL 488 (567)
T ss_dssp CCCGGGG--------------------------------------------------------------------GCTTC
T ss_pred ccchhhh--------------------------------------------------------------------cCCCC
Confidence 5664321 22457
Q ss_pred cEEEcccCcCccCCCccccccccceeeeccCccccccC-CccccCcCcccEEEccCccccccCCCC---ccccccccccc
Q 046275 639 MFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPI-PTEVGDLRGLNILDLSSNRLEGTIPSS---MSSLTLLNEID 714 (1176)
Q Consensus 639 ~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~i-P~~~~~L~~L~~L~Ls~N~l~g~iP~~---l~~l~~L~~l~ 714 (1176)
+.|||++|+|++ +| .|+++++|+.|+|++|+|++.+ |..|+.|++|+.|+|++|+|++.+|.. +..+++|+.||
T Consensus 489 ~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 489 EVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp CEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 778888888876 66 7888888888888888888766 888888888888888888888654432 23367777775
Q ss_pred c
Q 046275 715 L 715 (1176)
Q Consensus 715 l 715 (1176)
+
T Consensus 567 l 567 (567)
T 1dce_A 567 T 567 (567)
T ss_dssp C
T ss_pred C
Confidence 4
No 365
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=6.7e-18 Score=180.36 Aligned_cols=153 Identities=24% Similarity=0.340 Sum_probs=130.1
Q ss_pred CEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecc
Q 046275 377 ETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLW 456 (1176)
Q Consensus 377 ~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 456 (1176)
+.+++++|.++ .+|..+ .++|+.|+|++|++++..+..|..+++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 14 ~~v~c~~~~l~-~iP~~l----~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls 88 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNL----PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 88 (220)
T ss_dssp TEEECTTSCCS-SCCSSC----CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECC
T ss_pred CEEEcCCCCcC-cCCCcc----CcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECC
Confidence 56777777776 566544 2568888888888887667788888999999999999998888899999999999999
Q ss_pred cccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccc
Q 046275 457 LNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYG 534 (1176)
Q Consensus 457 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 534 (1176)
+|+++...+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++..
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 89 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 999996666678889999999999999998888999999999999999999998878889999999999999998864
No 366
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.74 E-value=7.3e-18 Score=188.44 Aligned_cols=172 Identities=20% Similarity=0.199 Sum_probs=86.2
Q ss_pred CCCCCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCcccccccCCCCCccc
Q 046275 142 GSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGDINVSKCKNLQ 221 (1176)
Q Consensus 142 ~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~~~~~~l~~L~ 221 (1176)
+.+++|+.|++++|.|+.++ .+..+++|++|+|++|++++. +. +..+++|++|++++|.+++...+
T Consensus 43 ~~l~~L~~L~l~~~~i~~~~--~~~~l~~L~~L~L~~n~l~~~---~~--l~~l~~L~~L~l~~n~l~~~~~l------- 108 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDI---KP--LANLKNLGWLFLDENKVKDLSSL------- 108 (291)
T ss_dssp HHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCC---GG--GTTCTTCCEEECCSSCCCCGGGG-------
T ss_pred hhcCcccEEEccCCCcccCh--hHhcCCCCCEEEccCCccCCC---cc--cccCCCCCEEECCCCcCCCChhh-------
Confidence 34455555555555555442 134445555555555555542 11 33444444444444444433333
Q ss_pred eeeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCC
Q 046275 222 FLDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCS 301 (1176)
Q Consensus 222 ~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~ 301 (1176)
..+++|++|+|++|++++. ..+..+++|++|++++|.+++. ..+..++
T Consensus 109 ----------------~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--------------~~l~~l~ 156 (291)
T 1h6t_A 109 ----------------KDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--------------TVLSRLT 156 (291)
T ss_dssp ----------------TTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--------------GGGGGCT
T ss_pred ----------------ccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--------------hhhccCC
Confidence 4444444444444444432 2344444444455544444421 0112234
Q ss_pred CccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCC
Q 046275 302 SLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTG 364 (1176)
Q Consensus 302 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~ 364 (1176)
+|++|+|++|++++..+ +..+++|++|++++|.++ .++. +..+++|++|++++|.++.
T Consensus 157 ~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~-~l~~--l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 157 KLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS-DLRA--LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp TCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-BCGG--GTTCTTCSEEEEEEEEEEC
T ss_pred CCCEEEccCCccccchh--hcCCCccCEEECCCCcCC-CChh--hccCCCCCEEECcCCcccC
Confidence 55555555555554333 666667777777777666 4442 5667777777777777664
No 367
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.74 E-value=4.1e-18 Score=190.49 Aligned_cols=62 Identities=11% Similarity=0.134 Sum_probs=28.8
Q ss_pred CCCCCccceeeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeecccccc
Q 046275 214 VSKCKNLQFLDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFS 278 (1176)
Q Consensus 214 ~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 278 (1176)
+..+++|+.|++++|.++.+ +.+..+++|++|+|++|++++..+ +.++++|++|+|++|.++
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 103 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK 103 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred hhhcCcccEEEccCCCcccC-hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCC
Confidence 33444455555555544433 224444555555555555544333 444444444444444443
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=4.2e-18 Score=187.31 Aligned_cols=173 Identities=23% Similarity=0.255 Sum_probs=142.0
Q ss_pred CccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEE
Q 046275 470 NIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWL 549 (1176)
Q Consensus 470 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 549 (1176)
.+.++..+++++|.+++ ++ .+..+++|++|++++|+++ .+| .+..+++|++|+|++|++++. |. +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEE
Confidence 56777888888888884 33 6788889999999999888 456 688889999999999999854 44 8889999999
Q ss_pred EccCCCCcccCChhHHhhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCC
Q 046275 550 DLNTNLFNGSIPPALFKQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQ 629 (1176)
Q Consensus 550 ~L~~N~l~g~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 629 (1176)
+|++|++++ +|..
T Consensus 91 ~L~~N~l~~-l~~~------------------------------------------------------------------ 103 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI------------------------------------------------------------------ 103 (263)
T ss_dssp ECCSSCCSC-CTTC------------------------------------------------------------------
T ss_pred ECCCCccCC-cCcc------------------------------------------------------------------
Confidence 999998874 3210
Q ss_pred CCcCCCCCccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCcccccc
Q 046275 630 PTFNHNGSMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTL 709 (1176)
Q Consensus 630 ~~~~~~~~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~ 709 (1176)
.. .+|+.|+|++|++++ +| .++.+++|+.|+|++|++++ +| .++.+++|+.|+|++|++++. ..+..+++
T Consensus 104 ---~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~ 173 (263)
T 1xeu_A 104 ---PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKK 173 (263)
T ss_dssp ---CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCC
T ss_pred ---cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch--HHhccCCC
Confidence 01 368889999999996 44 68999999999999999995 55 799999999999999999965 77899999
Q ss_pred ccccccccccccCCCC
Q 046275 710 LNEIDLCNNQLTGMIP 725 (1176)
Q Consensus 710 L~~l~ls~N~l~g~~p 725 (1176)
|+.|++++|++++.+.
T Consensus 174 L~~L~l~~N~~~~~~~ 189 (263)
T 1xeu_A 174 VNWIDLTGQKCVNEPV 189 (263)
T ss_dssp CCEEEEEEEEEECCCE
T ss_pred CCEEeCCCCcccCCcc
Confidence 9999999999988754
No 369
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.73 E-value=9.4e-18 Score=193.93 Aligned_cols=176 Identities=23% Similarity=0.198 Sum_probs=119.5
Q ss_pred cEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCccccc-CCCCCCEEEccCCcCCCCCCccccCCCCCCccEEE
Q 046275 328 ESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLS-NLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELF 406 (1176)
Q Consensus 328 ~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~ 406 (1176)
+.+++++|+++ .+|..+ .+.+++|+|++|.|++..+..+. ++++|++|+|
T Consensus 21 ~~l~c~~~~l~-~iP~~~---~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L------------------------- 71 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSL---PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLL------------------------- 71 (361)
T ss_dssp TEEECCSSCCS-SCCSSC---CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEEC-------------------------
T ss_pred CEEEeCCCCcC-ccCccC---CCCCCEEECCCCCCCccChhhhhhcccccCEEEC-------------------------
Confidence 45666666665 555432 13355555555555544444444 4444555554
Q ss_pred ccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccC
Q 046275 407 LQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTG 486 (1176)
Q Consensus 407 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 486 (1176)
++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|+|++
T Consensus 72 -~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 150 (361)
T 2xot_A 72 -SHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR 150 (361)
T ss_dssp -CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS
T ss_pred -CCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe
Confidence 4455544445566777777788888887776666677778888888888888877777788888888888888888886
Q ss_pred cccccc---ccCCCCCeeeccccccCCCCCccccCCCC--CCeEEccCCccc
Q 046275 487 TLPAAL---SNCTNLNWISLSNNHLGGEIPTWIGQLSN--LAILKLSNNSFY 533 (1176)
Q Consensus 487 ~~p~~~---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~ 533 (1176)
..+..| .++++|+.|+|++|+|++..+..+..++. |+.|+|++|.+.
T Consensus 151 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 151 FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred eCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 555555 56888888888888888666667777776 488999999886
No 370
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.73 E-value=3.1e-17 Score=176.49 Aligned_cols=154 Identities=25% Similarity=0.288 Sum_probs=132.9
Q ss_pred CCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeec
Q 046275 376 LETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKL 455 (1176)
Q Consensus 376 L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 455 (1176)
.+.++++++.++ .+|..+ .++|++|+|++|++++..|..|.++++|++|+|++|+++...+..|..+++|+.|+|
T Consensus 21 ~~~v~c~~~~l~-~ip~~~----~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGI----PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp TTEEECTTSCCS-SCCSCC----CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEeEccCCCcC-ccCCCC----CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEEC
Confidence 566788888776 666654 367888888888888888888999999999999999998666677889999999999
Q ss_pred ccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCccccc
Q 046275 456 WLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGR 535 (1176)
Q Consensus 456 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 535 (1176)
++|++++..+..|..+++|++|+|++|+|+ .+|..+.++++|++|+|++|+|++..+..+..+++|+.|+|++|.+.+.
T Consensus 96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 999999777777899999999999999999 7888899999999999999999977777899999999999999998754
No 371
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.70 E-value=2.6e-17 Score=180.39 Aligned_cols=139 Identities=17% Similarity=0.170 Sum_probs=107.3
Q ss_pred hcCCCCCceEeEeCceEEEEEEE-CCCCE--EEEEEeeccCCc------------------------CHHHHHHHHHHHH
Q 046275 859 TNGFHNDSLIGSGGFGDVYKAKL-KDGST--VAIKKLIHISGQ------------------------GDREFTAEMETIG 911 (1176)
Q Consensus 859 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~ 911 (1176)
..-|.+.+.||+|+||.||+|++ .+|+. ||||.+...... ....+.+|+.++.
T Consensus 46 ~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 125 (258)
T 1zth_A 46 GYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLE 125 (258)
T ss_dssp TSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHH
T ss_pred CCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHH
Confidence 33467889999999999999998 67888 999986432111 0125788999999
Q ss_pred hcCCCCc--ccceeEEeeCCeeEEEEeeccC-C----CHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHH-hcCCCC
Q 046275 912 KIKHRNL--VPLLGYCKVGEERLLVYEYMRY-G----SLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLH-HNCIPH 983 (1176)
Q Consensus 912 ~l~h~ni--v~l~~~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~~~~ 983 (1176)
+++|+++ +.++++ ...++||||+.+ | +|.++... .++..+..++.|++.|+.||| +. +
T Consensus 126 ~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---g 191 (258)
T 1zth_A 126 RAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---E 191 (258)
T ss_dssp HHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---C
T ss_pred HHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---C
Confidence 9988864 333332 356899999942 4 67766432 224467789999999999999 87 9
Q ss_pred eeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 984 IIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 984 ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
|+||||||+|||++. .++|+|||+|...
T Consensus 192 ivHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 192 LVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999999998 9999999999754
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=1.2e-17 Score=183.62 Aligned_cols=168 Identities=28% Similarity=0.336 Sum_probs=103.8
Q ss_pred CccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEc
Q 046275 302 SLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDL 381 (1176)
Q Consensus 302 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 381 (1176)
++..+++++|.+++.. .+..+++|++|++++|+++ .++ .+..+++|++|+|++|.+++..+ +.++++|+.|+|
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 4555566666666332 4566677777777777776 555 25667777777777777775433 677777777777
Q ss_pred cCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeeccccccc
Q 046275 382 SSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLH 461 (1176)
Q Consensus 382 s~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 461 (1176)
++|++++ +|... . .+|++|+|++|++++. ..+..+++|+.|+|++|++++. + .+..+++|+.|+|++|+++
T Consensus 93 ~~N~l~~-l~~~~---~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 93 NRNRLKN-LNGIP---S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp CSSCCSC-CTTCC---C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred CCCccCC-cCccc---c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 7777763 33321 1 4566666666666642 2466666777777777776643 3 4566666666666666666
Q ss_pred CCCCCCCCCccccceeecccccccCc
Q 046275 462 GEIPPELGNIQTLETLFLDFNELTGT 487 (1176)
Q Consensus 462 ~~~p~~~~~l~~L~~L~L~~N~l~~~ 487 (1176)
+. ..+..+++|+.|++++|.+++.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 44 4555566666666666666543
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.69 E-value=6.8e-17 Score=169.49 Aligned_cols=86 Identities=22% Similarity=0.277 Sum_probs=51.6
Q ss_pred CCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCE
Q 046275 469 GNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIW 548 (1176)
Q Consensus 469 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 548 (1176)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44556666666666666 344 4666666666666666554 2235666666666666666666555666666666666
Q ss_pred EEccCCCCcc
Q 046275 549 LDLNTNLFNG 558 (1176)
Q Consensus 549 L~L~~N~l~g 558 (1176)
|+|++|.+++
T Consensus 117 L~Ls~n~i~~ 126 (197)
T 4ezg_A 117 LDISHSAHDD 126 (197)
T ss_dssp EECCSSBCBG
T ss_pred EEecCCccCc
Confidence 6666665554
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.69 E-value=7.1e-17 Score=169.36 Aligned_cols=150 Identities=18% Similarity=0.212 Sum_probs=107.8
Q ss_pred CccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecc
Q 046275 401 SLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLD 480 (1176)
Q Consensus 401 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 480 (1176)
+|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..++.+++|++|+|+
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 3444444444444 333 4566677777777777654 23467777788888888888877777778888888888888
Q ss_pred cccccCccccccccCCCCCeeeccccc-cCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcc
Q 046275 481 FNELTGTLPAALSNCTNLNWISLSNNH-LGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNG 558 (1176)
Q Consensus 481 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g 558 (1176)
+|++++..|..+.++++|++|++++|+ ++ .+| .+..+++|++|++++|++++ ++ .+..+++|+.|++++|++.+
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 888887777888888888888888887 54 555 57888888888888888874 44 67788888888888888753
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=2.7e-17 Score=171.66 Aligned_cols=89 Identities=24% Similarity=0.340 Sum_probs=51.2
Q ss_pred CccEEEcccCcCccCCCccccccccceeeeccCccccccCCccccCcCcccEEEccCccccccCCCCccccccccccccc
Q 046275 637 SMMFLDISYNMLSGSIPKEIGSMSYLFILNLGHNNLSGPIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLTLLNEIDLC 716 (1176)
Q Consensus 637 ~l~~LdLs~N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ls 716 (1176)
+|++|||++|+|++.+|..|+++++|+.|+|++|+|++..|..|+.+++|++|+|++|+|++.+|..+..+++|+.|+|+
T Consensus 55 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 134 (192)
T 1w8a_A 55 HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLA 134 (192)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECT
T ss_pred CCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeC
Confidence 45555555555555555555555555555555555555555555555556666666666555555555555556666666
Q ss_pred cccccCCCC
Q 046275 717 NNQLTGMIP 725 (1176)
Q Consensus 717 ~N~l~g~~p 725 (1176)
+|++++..|
T Consensus 135 ~N~l~c~c~ 143 (192)
T 1w8a_A 135 SNPFNCNCH 143 (192)
T ss_dssp TCCBCCSGG
T ss_pred CCCccCcCc
Confidence 665555544
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=1.3e-16 Score=166.47 Aligned_cols=137 Identities=25% Similarity=0.271 Sum_probs=116.0
Q ss_pred cEEEcCCccccCCCCccccCCCccCeeecccccccCCCCC-CCCCccccceeecccccccCccccccccCCCCCeeeccc
Q 046275 427 VSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPP-ELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSN 505 (1176)
Q Consensus 427 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 505 (1176)
+.+++++|+++ .+|..+.. +|++|++++|++++..+. .|+.+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56777777776 56665543 778888888888765554 478888999999999999988888999999999999999
Q ss_pred cccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHh
Q 046275 506 NHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFK 566 (1176)
Q Consensus 506 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~ 566 (1176)
|+|++..|..|..+++|++|+|++|++++.+|..+..+++|+.|+|++|+|+|.++-..+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~ 148 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFA 148 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHH
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHH
Confidence 9999888888999999999999999999999999999999999999999999988765543
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=2e-17 Score=188.76 Aligned_cols=103 Identities=14% Similarity=0.031 Sum_probs=72.2
Q ss_pred CCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCC-eeeccccccCCCCCccccCCCCCCeE
Q 046275 447 LSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLN-WISLSNNHLGGEIPTWIGQLSNLAIL 525 (1176)
Q Consensus 447 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 525 (1176)
+++|+.|+|++|+++...+..|.++++|+.|+|.+| ++.+.+.+|.++++|+ .|++.+ +++...+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 566666666666666555556777777777777776 6655666777777777 777777 5665556777777777777
Q ss_pred EccCCcccccCCCCCCCCCCCCEEEc
Q 046275 526 KLSNNSFYGRIPPELGDCRSLIWLDL 551 (1176)
Q Consensus 526 ~L~~N~l~~~~p~~~~~l~~L~~L~L 551 (1176)
++++|+++...+..|.+|++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 77777777666667777777777753
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=9.6e-17 Score=183.03 Aligned_cols=260 Identities=20% Similarity=0.208 Sum_probs=150.6
Q ss_pred ccCccccccCCcccCCCCCcccccCCCCCCcEEecCCCCCCccccccccc--------cCCCcEEEccCCCCCCCCcccc
Q 046275 118 SSFLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSNLLDFSGREAGSL--------KLSLEVLDLSYNKISGANVVPW 189 (1176)
Q Consensus 118 ~~~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~--------~~~L~~LdLs~N~i~~~~~~~~ 189 (1176)
+++|++||||+|++...... -+.++.+..+.+..| .++..+|.. +.+|++|+|++ +++. ++.
T Consensus 48 l~~L~~LdLs~n~i~~~~~~---~~~~~~~~~~~~~~~---~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~---I~~ 117 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGK---AGTYPNGKFYIYMAN---FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKN---IED 117 (329)
T ss_dssp CTTCCEEEEEEEEECCEEES---SSSSGGGCCEEECTT---EECTTTTEEEETTEEEECTTCCC-CBCT-TCCE---ECT
T ss_pred hccCeEEecCcceeEEecCc---ccccccccccccccc---ccCHHHhcccccccccccCCCcEEECCc-cccc---hhH
Confidence 55677777777776521111 111222334444444 344556666 66666666666 5553 555
Q ss_pred ccccCCCCccEEEeCCCcccc--cccCCCCCccceeeccCCcc----cccC-CCccCCCCCc-EEEcCCCcCCCCcChhh
Q 046275 190 ILFNGCDELKQLALKGNKVTG--DINVSKCKNLQFLDVSSNNF----SMAV-PSFGDCLALE-YLDISANKFTGDVGHAI 261 (1176)
Q Consensus 190 ~~f~~~~~L~~L~L~~n~l~~--~~~~~~l~~L~~L~Ls~N~l----~~~~-~~l~~l~~L~-~L~Ls~N~l~~~~~~~l 261 (1176)
.+|.+|++|+.|++.+|.+.. ...+..+.++..+.+..+.. ..+. ..|.++..|+ .+.+.... .++..+
T Consensus 118 ~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~ 194 (329)
T 3sb4_A 118 AAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG---KLEDEI 194 (329)
T ss_dssp TTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTC---CHHHHH
T ss_pred HHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCC---cHHHHH
Confidence 666666666666666666553 33455556666655554322 1111 2355666666 55554321 111111
Q ss_pred ----hccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcC
Q 046275 262 ----SACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKF 337 (1176)
Q Consensus 262 ----~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 337 (1176)
....+++.+.+.++-.. .-...+...+++|+.++|++|+++.+.+.+|.++++|+.|+|.+| +
T Consensus 195 ~~~~~~~~~~~~l~~~~~l~~------------~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i 261 (329)
T 3sb4_A 195 MKAGLQPRDINFLTIEGKLDN------------ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-L 261 (329)
T ss_dssp HHTTCCGGGCSEEEEEECCCH------------HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-C
T ss_pred hhcccCccccceEEEeeeecH------------HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-c
Confidence 13455666666654221 111223334677888888887777666667888888888888777 6
Q ss_pred cccCCHHHHhcCCCCC-EEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCCCccEEEc
Q 046275 338 SGELPIEIFLSMSNLK-ELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRNSLKELFL 407 (1176)
Q Consensus 338 ~~~i~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L 407 (1176)
+ .|+...|.++++|+ .|++.+ .++.+.+.+|.++++|+.|++++|.++ .++...+ ..+++|+.++.
T Consensus 262 ~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~-~I~~~aF-~~~~~L~~ly~ 328 (329)
T 3sb4_A 262 K-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKIT-TLGDELF-GNGVPSKLIYK 328 (329)
T ss_dssp C-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCC-EECTTTT-CTTCCCCEEEC
T ss_pred c-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccC-ccchhhh-cCCcchhhhcc
Confidence 5 67777788888887 888877 666566677888888888888777777 4444332 33566777653
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.4e-15 Score=158.67 Aligned_cols=137 Identities=23% Similarity=0.224 Sum_probs=111.3
Q ss_pred cEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeecccc
Q 046275 427 VSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNN 506 (1176)
Q Consensus 427 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 506 (1176)
+.+++++|.++ .+|..+. ++|++|+|++|.++ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46777777776 5565443 46777788888777 66777888888888888888888777788889999999999999
Q ss_pred ccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHhh
Q 046275 507 HLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQ 567 (1176)
Q Consensus 507 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~ 567 (1176)
+|++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++.+...-.+|..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~ 149 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 149 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHH
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHHH
Confidence 9998888889999999999999999996666678999999999999999998776555543
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.61 E-value=1.3e-15 Score=155.26 Aligned_cols=131 Identities=24% Similarity=0.181 Sum_probs=64.4
Q ss_pred CccEEEccCcccc-CCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeec
Q 046275 401 SLKELFLQNNLLL-GSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFL 479 (1176)
Q Consensus 401 ~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 479 (1176)
+|++|+|++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+|
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 4555555555554 34455555555555555555555533 44455555555555555555444444444555555555
Q ss_pred ccccccCcc-ccccccCCCCCeeeccccccCCCCC---ccccCCCCCCeEEccCCccc
Q 046275 480 DFNELTGTL-PAALSNCTNLNWISLSNNHLGGEIP---TWIGQLSNLAILKLSNNSFY 533 (1176)
Q Consensus 480 ~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~ 533 (1176)
++|+|++.. +..+.++++|++|++++|++++..+ ..+..+++|++|++++|.+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 555554321 1444455555555555555543322 24444555555555555444
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.60 E-value=1.3e-15 Score=155.36 Aligned_cols=137 Identities=22% Similarity=0.137 Sum_probs=122.8
Q ss_pred cccCcEEEcCCcccc-CCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCee
Q 046275 423 CSQLVSLHLSFNYLT-GTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWI 501 (1176)
Q Consensus 423 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 501 (1176)
.++|+.|++++|+++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 478999999999998 78899999999999999999999965 889999999999999999998789889999999999
Q ss_pred eccccccCCCC-CccccCCCCCCeEEccCCcccccCC---CCCCCCCCCCEEEccCCCCcccCCh
Q 046275 502 SLSNNHLGGEI-PTWIGQLSNLAILKLSNNSFYGRIP---PELGDCRSLIWLDLNTNLFNGSIPP 562 (1176)
Q Consensus 502 ~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~g~ip~ 562 (1176)
+|++|++++.. +..+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+. ++|.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 99999999542 2789999999999999999995444 38999999999999999986 4553
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=5e-15 Score=152.31 Aligned_cols=133 Identities=22% Similarity=0.205 Sum_probs=109.2
Q ss_pred CcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccc
Q 046275 426 LVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSN 505 (1176)
Q Consensus 426 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 505 (1176)
.+.+++++|+++ .+|..+. ++|+.|++++|++++..+..|+.+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 456777777776 4554433 5778888888888766666778888888899999988877777788999999999999
Q ss_pred cccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCC
Q 046275 506 NHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIP 561 (1176)
Q Consensus 506 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip 561 (1176)
|+|++..+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|+++|.+|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99997777778999999999999999996656667889999999999999999877
No 383
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.57 E-value=5.2e-14 Score=163.84 Aligned_cols=265 Identities=11% Similarity=0.120 Sum_probs=156.9
Q ss_pred CCCCCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCcccc--cccCCCCCc
Q 046275 142 GSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTG--DINVSKCKN 219 (1176)
Q Consensus 142 ~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~--~~~~~~l~~ 219 (1176)
..+..++.+.+.+ .++.++..+|..+ +|+.+++..| ++. +...+|.++ +|+.+.+.. .++. ..+|..|++
T Consensus 110 ~~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~---I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~ 181 (401)
T 4fdw_A 110 EILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKS---IGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYN 181 (401)
T ss_dssp EECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCE---ECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTT
T ss_pred EecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccE---ECHHhcCCC-CceEEEeCC-CccEehHHHhhCccc
Confidence 3456777777764 4777777777775 6888887766 443 666677774 577777765 4443 345667777
Q ss_pred cceeeccCCcccccCCC-ccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhh
Q 046275 220 LQFLDVSSNNFSMAVPS-FGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLAD 298 (1176)
Q Consensus 220 L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~ 298 (1176)
|+.+++++|+++.++.. |. +.+|+.+.|..+ ++.+...+|.++++|+.+++..| ++ .++...|.
T Consensus 182 L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~------------~I~~~aF~ 246 (401)
T 4fdw_A 182 LKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VS------------TIGQEAFR 246 (401)
T ss_dssp CCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CC------------EECTTTTT
T ss_pred CCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-cc------------Cccccccc
Confidence 77777777777766554 43 567777777643 66566667777777777777654 22 23333343
Q ss_pred cCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCc----ccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCC
Q 046275 299 LCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFS----GELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLT 374 (1176)
Q Consensus 299 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~----~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 374 (1176)
. .+|+.+.+ .+.++.....+|.++++|+.+++.+|.+. ..++...|.++++|+.++|. +.++.....+|.+++
T Consensus 247 ~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~ 323 (401)
T 4fdw_A 247 E-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNR 323 (401)
T ss_dssp T-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCC
T ss_pred c-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCC
Confidence 3 46666666 34455445566666666666666665542 13555566666666666666 335444445555556
Q ss_pred CCCEEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCC-ccCee
Q 046275 375 NLETLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLS-KLQDL 453 (1176)
Q Consensus 375 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L 453 (1176)
+|+.++|..| ++ ...+.+|.++ +|+.+++++|.+....+..|..++ +++.|
T Consensus 324 ~L~~l~lp~~-l~--------------------------~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l 375 (401)
T 4fdw_A 324 KVTQLTIPAN-VT--------------------------QINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVI 375 (401)
T ss_dssp SCCEEEECTT-CC--------------------------EECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEE
T ss_pred CccEEEECcc-cc--------------------------EEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEE
Confidence 6666655433 32 2333455555 566666666655544444555553 45566
Q ss_pred ecccccc
Q 046275 454 KLWLNQL 460 (1176)
Q Consensus 454 ~L~~N~l 460 (1176)
++..+.+
T Consensus 376 ~vp~~~~ 382 (401)
T 4fdw_A 376 RVPAESV 382 (401)
T ss_dssp EECGGGH
T ss_pred EeCHHHH
Confidence 6555443
No 384
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.57 E-value=3.4e-14 Score=165.42 Aligned_cols=269 Identities=12% Similarity=0.123 Sum_probs=162.1
Q ss_pred CCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcccccCCcc
Q 046275 241 LALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNLSGKVPSR 320 (1176)
Q Consensus 241 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l~~~~p~~ 320 (1176)
..++.+.+.+ .++.+...+|.++ +|+.+.+..| ++ .++...|.. .+|+.+.+.. .++...+.+
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~------------~I~~~aF~~-~~L~~i~lp~-~l~~I~~~a 175 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LK------------SIGDMAFFN-STVQEIVFPS-TLEQLKEDI 175 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CC------------EECTTTTTT-CCCCEEECCT-TCCEECSST
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-cc------------EECHHhcCC-CCceEEEeCC-CccEehHHH
Confidence 3444444443 2443444455553 4555555544 33 222333333 2466666654 455455567
Q ss_pred ccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCccccCCCCC
Q 046275 321 FGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHNLCQGPRN 400 (1176)
Q Consensus 321 ~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 400 (1176)
|.++++|+.+++++|+++ .++...|. ..+|+.+.|..+ ++.....+|.++++|+.+++..| ++ .++...+.. .
T Consensus 176 F~~c~~L~~l~l~~n~l~-~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~--~ 248 (401)
T 4fdw_A 176 FYYCYNLKKADLSKTKIT-KLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRE--S 248 (401)
T ss_dssp TTTCTTCCEEECTTSCCS-EECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTT--C
T ss_pred hhCcccCCeeecCCCcce-EechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-cc-Ccccccccc--C
Confidence 777777777777777776 67777775 477777777644 55455667777777777777664 33 333333322 3
Q ss_pred CccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecc
Q 046275 401 SLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLD 480 (1176)
Q Consensus 401 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 480 (1176)
+|+.+.+. +.++.....+|.++++|+.+++.+|.+.. +.+....+..|.++++|+.++|.
T Consensus 249 ~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~-------------------~~~~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 249 GITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFND-------------------DPEAMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp CCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCC-------------------CTTCEECTTTTTTCTTCCEECCC
T ss_pred CccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccC-------------------CcccEECHHHhhCCccCCeEEeC
Confidence 45666552 33443445566666666666666555430 01112344566677777777777
Q ss_pred cccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCC-CCCEEEccCCCC
Q 046275 481 FNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCR-SLIWLDLNTNLF 556 (1176)
Q Consensus 481 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l 556 (1176)
+.++.+...+|.+|++|+.++|.+| ++..-+.+|.++ +|+.+++++|.+....+..|.+++ +++.|++..|.+
T Consensus 309 -~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 309 -ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp -TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred -CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 3466556677888888888888655 554556677777 888888888887755666777774 678888776654
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.57 E-value=1.7e-15 Score=150.98 Aligned_cols=127 Identities=23% Similarity=0.213 Sum_probs=72.0
Q ss_pred ccCcEEEcCCcccc-CCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeee
Q 046275 424 SQLVSLHLSFNYLT-GTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWIS 502 (1176)
Q Consensus 424 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 502 (1176)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555554 44555555555555555555555533 4555556666666666666655555555566666666
Q ss_pred ccccccCCC-CCccccCCCCCCeEEccCCcccccCC---CCCCCCCCCCEEEcc
Q 046275 503 LSNNHLGGE-IPTWIGQLSNLAILKLSNNSFYGRIP---PELGDCRSLIWLDLN 552 (1176)
Q Consensus 503 Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~ 552 (1176)
+++|++++. .|..++.+++|++|++++|++++..+ ..+..+++|+.||++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666542 23556666666666666666664333 245566666666654
No 386
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.56 E-value=7.8e-14 Score=163.08 Aligned_cols=326 Identities=17% Similarity=0.207 Sum_probs=168.0
Q ss_pred ccCCCCCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCccc-ccccCCCCC
Q 046275 140 YLGSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVT-GDINVSKCK 218 (1176)
Q Consensus 140 ~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~-~~~~~~~l~ 218 (1176)
++.+|.+|+.+.|.. .++.|+..+|..|.+|+.+++..+ ++. +...+|.+|.+|+.+.+..+-.. +..++..+.
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~---I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKM---IGRCTFSGCYALKSILLPLMLKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCE---ECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCC
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceE---ccchhhcccccchhhcccCceeeecceeeeccc
Confidence 466777777777764 377777777777777777777654 332 56666777777777666544222 233444444
Q ss_pred ccceeeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhh
Q 046275 219 NLQFLDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLAD 298 (1176)
Q Consensus 219 ~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~ 298 (1176)
.+......... .-...+|.++.+|+.+.+.++. ..+...+|.++.+|+.+++..| ++ .++...+.
T Consensus 141 ~~~~~~~~~~~-~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~------------~I~~~~F~ 205 (394)
T 4fs7_A 141 FKEITIPEGVT-VIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LK------------IIRDYCFA 205 (394)
T ss_dssp CSEEECCTTCC-EECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CC------------EECTTTTT
T ss_pred ccccccCcccc-ccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ce------------EeCchhhc
Confidence 33322222211 1112346667777777776542 3345556666777776666544 22 23334444
Q ss_pred cCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCE
Q 046275 299 LCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLET 378 (1176)
Q Consensus 299 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 378 (1176)
.+..|+.+.+..+... +...+....+|+.+.+..+ ++ .++...|..+..|+.+.+..+... .....+..+..++.
T Consensus 206 ~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~-~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~ 280 (394)
T 4fs7_A 206 ECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FT-ELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKK 280 (394)
T ss_dssp TCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CC-EECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCE
T ss_pred cccccceeecCCCceE--eehhhcccCCCceEEECCC-ce-ecccccccccccceeEEcCCCcce-eeccccccccccce
Confidence 5556666655544332 2233334456666666433 22 344455566666666666655333 34455555666665
Q ss_pred EEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccc
Q 046275 379 LDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLN 458 (1176)
Q Consensus 379 L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 458 (1176)
+....+.+ +. ..|..+.+|+.+.+..+ ++.+-..+|.++++|+.++|..+
T Consensus 281 ~~~~~~~i----~~-------------------------~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~ 330 (394)
T 4fs7_A 281 VIYGSVIV----PE-------------------------KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL 330 (394)
T ss_dssp EEECSSEE----CT-------------------------TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred eccCceee----cc-------------------------ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc
Confidence 55544422 11 22333444444444332 33223334444444555444322
Q ss_pred cccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCe
Q 046275 459 QLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAI 524 (1176)
Q Consensus 459 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 524 (1176)
++..-...|.++++|+.+++..| ++.+...+|.++.+|+.+++..+ ++ .+..+|.+.++|+.
T Consensus 331 -v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 331 -VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp -CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred -ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 33233445555555555555544 44344555666666666666544 22 23344555555544
No 387
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.56 E-value=1.2e-14 Score=151.47 Aligned_cols=108 Identities=25% Similarity=0.333 Sum_probs=63.4
Q ss_pred cCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeecc
Q 046275 425 QLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLS 504 (1176)
Q Consensus 425 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 504 (1176)
+|++|+|++|+++ .+|..|..+++|+.|+|++|.+++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4555555555554 444555555555555555555555555555556666666666666665555566666666666666
Q ss_pred ccccCCCCCccccCCCCCCeEEccCCccc
Q 046275 505 NNHLGGEIPTWIGQLSNLAILKLSNNSFY 533 (1176)
Q Consensus 505 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 533 (1176)
+|+|+...+..|..+++|+.|+|++|.+.
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 66666444445666666666666666664
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.55 E-value=3.2e-15 Score=148.95 Aligned_cols=128 Identities=23% Similarity=0.196 Sum_probs=102.3
Q ss_pred CCccEEEccCcccc-CCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceee
Q 046275 400 NSLKELFLQNNLLL-GSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLF 478 (1176)
Q Consensus 400 ~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 478 (1176)
++|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..++.+++|++|++++|.+++.+|..++.+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45777777777777 66777777888888888888888755 6778888888888888888877777777788888888
Q ss_pred cccccccCc-cccccccCCCCCeeeccccccCCCCC---ccccCCCCCCeEEccC
Q 046275 479 LDFNELTGT-LPAALSNCTNLNWISLSNNHLGGEIP---TWIGQLSNLAILKLSN 529 (1176)
Q Consensus 479 L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~ 529 (1176)
+++|++++. .+..+.++++|++|++++|++++..+ ..++.+++|++|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 888888863 34788888999999999999886655 4788889999988864
No 389
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.54 E-value=2e-14 Score=147.70 Aligned_cols=131 Identities=22% Similarity=0.254 Sum_probs=86.7
Q ss_pred cEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccc
Q 046275 403 KELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFN 482 (1176)
Q Consensus 403 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 482 (1176)
+.+++++|+++ .+|..+. ++|+.|++++|++++..+..|..+++|++|++++|++++..+..++.+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 34455555554 2333222 45666666666666555555666667777777777776555556677777777777777
Q ss_pred cccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccC
Q 046275 483 ELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRI 536 (1176)
Q Consensus 483 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 536 (1176)
+|++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|++.+..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 777666666777778888888888877655555677788888888888777543
No 390
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.53 E-value=4.2e-15 Score=168.43 Aligned_cols=143 Identities=13% Similarity=0.081 Sum_probs=101.9
Q ss_pred HHHHhcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCC--------------cCHHH--------HHHHHHHHHh
Q 046275 855 LLEATNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISG--------------QGDRE--------FTAEMETIGK 912 (1176)
Q Consensus 855 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~E~~~l~~ 912 (1176)
+.....=|++.+.||+|+||.||+|...+|+.||||.+..... ..... ..+|...+.+
T Consensus 90 L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~r 169 (397)
T 4gyi_A 90 HAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKA 169 (397)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence 3333345899999999999999999999999999997642110 00011 2346667777
Q ss_pred cCCCCcccceeEEeeCCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCC
Q 046275 913 IKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSS 992 (1176)
Q Consensus 913 l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~ 992 (1176)
+.+.++....-+.. ...++||||++|++|.++.. . .....++.|++.+|.|||+. +||||||||.
T Consensus 170 L~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~--------~--~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~ 234 (397)
T 4gyi_A 170 LYEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSS--------V--PDPASLYADLIALILRLAKH---GLIHGDFNEF 234 (397)
T ss_dssp HHHTTCSCCCEEEE--ETTEEEEECCSCEEGGGCCC--------C--SCHHHHHHHHHHHHHHHHHT---TEECSCCSTT
T ss_pred HHhcCCCCCeeeec--cCceEEEEecCCccHhhhcc--------c--HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHH
Confidence 75544432222211 23479999999988765432 1 12356789999999999998 9999999999
Q ss_pred CEEECCCC----------cEEEEeeccccc
Q 046275 993 NVLLDENF----------EARVSDFGMARL 1012 (1176)
Q Consensus 993 NIll~~~~----------~~kl~DfGla~~ 1012 (1176)
|||+++++ .+.|+||+.+..
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred HEEEeCCCCcccccccccceEEEEeCCccc
Confidence 99998776 389999997753
No 391
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.52 E-value=1.7e-13 Score=160.18 Aligned_cols=334 Identities=17% Similarity=0.190 Sum_probs=209.2
Q ss_pred CCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCccc--ccccCCCCCccceeeccCCccccc
Q 046275 156 LLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVT--GDINVSKCKNLQFLDVSSNNFSMA 233 (1176)
Q Consensus 156 ~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~--~~~~~~~l~~L~~L~Ls~N~l~~~ 233 (1176)
.++.|+..+|..|.+|+.+++..+ ++. +...+|.+|.+|+.+++..+ ++ +...+..+.+|+.+.+..+--.-.
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~---I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~ 132 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VRE---IGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIG 132 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCE---ECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEEC
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccC---cchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeec
Confidence 467788899999999999999754 554 77788999988888888655 33 245567777777766654422211
Q ss_pred CCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcc
Q 046275 234 VPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNL 313 (1176)
Q Consensus 234 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l 313 (1176)
..+|.++..++....... ..+...+|.++++|+.+.+..+.. .++
T Consensus 133 ~~aF~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~~-------------~I~-------------------- 177 (394)
T 4fs7_A 133 VEAFKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSME-------------TLH-------------------- 177 (394)
T ss_dssp TTTTTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTCC-------------EEC--------------------
T ss_pred ceeeecccccccccCccc--cccchhhhcccCCCcEEecCCccc-------------eec--------------------
Confidence 224555543333322222 223334566666666665543321 122
Q ss_pred cccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCcc
Q 046275 314 SGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHN 393 (1176)
Q Consensus 314 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 393 (1176)
...|.++.+|+.+++..| ++ .++...|.++..|+.+.+..+... +.+......+|+.+.+..+. + .+...
T Consensus 178 ----~~~F~~c~~L~~i~l~~~-~~-~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~-~i~~~ 247 (394)
T 4fs7_A 178 ----NGLFSGCGKLKSIKLPRN-LK-IIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-T-ELGKS 247 (394)
T ss_dssp ----TTTTTTCTTCCBCCCCTT-CC-EECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-C-EECSS
T ss_pred ----cccccCCCCceEEEcCCC-ce-EeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCCc-e-ecccc
Confidence 334444444444444433 22 344444455555555544443221 12222333455555554321 1 12211
Q ss_pred ccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccc
Q 046275 394 LCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQT 473 (1176)
Q Consensus 394 ~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 473 (1176)
.+ .....|+.+.+..+... .....|..+..++.+....+.+. ...|..+.+|+.+.+..+ ++..-...|.++.+
T Consensus 248 ~f-~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~ 321 (394)
T 4fs7_A 248 VF-YGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTS 321 (394)
T ss_dssp TT-TTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTT
T ss_pred cc-cccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCC
Confidence 11 12345666666555433 44567788888888888776543 346788999999999765 66566778999999
Q ss_pred cceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEE
Q 046275 474 LETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWL 549 (1176)
Q Consensus 474 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 549 (1176)
|+.++|..+ ++.+...+|.++++|+.+++..| ++.....+|.++++|+.+++..+ +. .+...|.++++|+.+
T Consensus 322 L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 322 LVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 999999754 77666889999999999999887 76566788999999999999876 33 456789999998865
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=3.4e-16 Score=164.29 Aligned_cols=155 Identities=23% Similarity=0.254 Sum_probs=105.1
Q ss_pred cccCCCCCeeeccccccCCCCCc------cccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHH
Q 046275 492 LSNCTNLNWISLSNNHLGGEIPT------WIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALF 565 (1176)
Q Consensus 492 ~~~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~ 565 (1176)
+.....++.+++++|.++|.+|. .++.+++|++|+|++|++++ +| .+..+++|+.|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 33444555555555555555554 66666777777777777664 55 6666677777777777665 4553221
Q ss_pred hhcccchhhhccccceeeeecCCCCcccCCCCchhhhhhhhhhccccccCCCCccccccCCCCCCCcCCCCCccEEEccc
Q 046275 566 KQSGKIAANFIVGKKYVYIKNDGSKECHGAGNLLEFAGIRAERLSRISTRSPCNFTRVYGGHTQPTFNHNGSMMFLDISY 645 (1176)
Q Consensus 566 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LdLs~ 645 (1176)
. +.+|++|||++
T Consensus 91 ~--------------------------------------------------------------------~~~L~~L~L~~ 102 (198)
T 1ds9_A 91 V--------------------------------------------------------------------ADTLEELWISY 102 (198)
T ss_dssp H--------------------------------------------------------------------HHHCSEEEEEE
T ss_pred c--------------------------------------------------------------------CCcCCEEECcC
Confidence 1 12467788888
Q ss_pred CcCccCCCccccccccceeeeccCccccccCC--ccccCcCcccEEEccCccccccCCCC----------cccccccccc
Q 046275 646 NMLSGSIPKEIGSMSYLFILNLGHNNLSGPIP--TEVGDLRGLNILDLSSNRLEGTIPSS----------MSSLTLLNEI 713 (1176)
Q Consensus 646 N~l~g~iP~~~~~l~~L~~L~L~~N~l~g~iP--~~~~~L~~L~~L~Ls~N~l~g~iP~~----------l~~l~~L~~l 713 (1176)
|++++ +| .++.+++|+.|+|++|++++ +| ..++.+++|++|++++|++++.+|.. +..+++|+.|
T Consensus 103 N~l~~-l~-~~~~l~~L~~L~l~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~L 179 (198)
T 1ds9_A 103 NQIAS-LS-GIEKLVNLRVLYMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKL 179 (198)
T ss_dssp EECCC-HH-HHHHHHHSSEEEESEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEE
T ss_pred CcCCc-CC-ccccCCCCCEEECCCCcCCc-hhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEE
Confidence 88875 55 67888888888888888884 33 47888888888888888888777764 7788888877
Q ss_pred ccccccccC
Q 046275 714 DLCNNQLTG 722 (1176)
Q Consensus 714 ~ls~N~l~g 722 (1176)
| +|.++.
T Consensus 180 d--~~~i~~ 186 (198)
T 1ds9_A 180 D--GMPVDV 186 (198)
T ss_dssp C--CGGGTT
T ss_pred C--CcccCH
Confidence 6 666653
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=5e-16 Score=162.98 Aligned_cols=135 Identities=26% Similarity=0.301 Sum_probs=113.8
Q ss_pred CCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccC
Q 046275 416 IPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNC 495 (1176)
Q Consensus 416 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 495 (1176)
+|..+..+++|++|+|++|++++ +| .+..+++|++|++++|.++ .+|..+..+++|++|+|++|++++ +| .+.++
T Consensus 40 l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l 114 (198)
T 1ds9_A 40 MDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKL 114 (198)
T ss_dssp CHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHH
T ss_pred hhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccC
Confidence 44578888999999999999985 67 8888999999999999998 678888888999999999999995 55 68899
Q ss_pred CCCCeeeccccccCCCCC-ccccCCCCCCeEEccCCcccccCCCC----------CCCCCCCCEEEccCCCCc
Q 046275 496 TNLNWISLSNNHLGGEIP-TWIGQLSNLAILKLSNNSFYGRIPPE----------LGDCRSLIWLDLNTNLFN 557 (1176)
Q Consensus 496 ~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~----------~~~l~~L~~L~L~~N~l~ 557 (1176)
++|++|++++|++++..+ ..+..+++|++|++++|++.+.+|.. +..+++|+.|| +|+++
T Consensus 115 ~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 115 VNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 999999999999985322 47889999999999999998877764 78889999887 66665
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.48 E-value=2.8e-14 Score=146.49 Aligned_cols=133 Identities=17% Similarity=0.142 Sum_probs=101.4
Q ss_pred ccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCC
Q 046275 420 LSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLN 499 (1176)
Q Consensus 420 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 499 (1176)
+.++++|+.|++++|+++ .+|......++|++|++++|.+++. ..++.+++|++|+|++|+|++..+..|.++++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 455667777777777777 3444333333777788877777754 5777888888888888888865556668888899
Q ss_pred eeeccccccCCCCCc--cccCCCCCCeEEccCCcccccCCCC----CCCCCCCCEEEccCCCCc
Q 046275 500 WISLSNNHLGGEIPT--WIGQLSNLAILKLSNNSFYGRIPPE----LGDCRSLIWLDLNTNLFN 557 (1176)
Q Consensus 500 ~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~ 557 (1176)
+|+|++|+++ .+|. .+..+++|++|++++|.++ .+|.. +..+++|+.||+++|...
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999999886 5665 7888899999999999987 56664 888899999999988765
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.45 E-value=1.2e-13 Score=141.65 Aligned_cols=59 Identities=19% Similarity=0.119 Sum_probs=33.1
Q ss_pred ccceeeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeecccccc
Q 046275 219 NLQFLDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFS 278 (1176)
Q Consensus 219 ~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 278 (1176)
+|++|++++|.++++ +.+..+++|++|+|++|+|++..+..+..+++|++|+|++|+|+
T Consensus 43 ~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 101 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101 (176)
T ss_dssp CCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC
T ss_pred CCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC
Confidence 555555555555544 44555666666666666665444444455555555555555553
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=4e-13 Score=136.79 Aligned_cols=108 Identities=21% Similarity=0.250 Sum_probs=86.6
Q ss_pred CeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCC
Q 046275 451 QDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNN 530 (1176)
Q Consensus 451 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 530 (1176)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 45555555555 3554443 67788888888888777888888888899999999988777777888999999999999
Q ss_pred cccccCCCCCCCCCCCCEEEccCCCCcccCC
Q 046275 531 SFYGRIPPELGDCRSLIWLDLNTNLFNGSIP 561 (1176)
Q Consensus 531 ~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip 561 (1176)
+|++..|..|..+++|+.|+|++|++++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9987666679999999999999999998765
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=1.2e-12 Score=133.78 Aligned_cols=108 Identities=19% Similarity=0.239 Sum_probs=81.7
Q ss_pred CeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCC
Q 046275 451 QDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNN 530 (1176)
Q Consensus 451 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 530 (1176)
+.+++++|++. .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 34555555554 4555443 66777888888888777778888888888888888888666666788888889999999
Q ss_pred cccccCCCCCCCCCCCCEEEccCCCCcccCC
Q 046275 531 SFYGRIPPELGDCRSLIWLDLNTNLFNGSIP 561 (1176)
Q Consensus 531 ~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip 561 (1176)
+|++..+..|..+++|+.|+|++|+|.+..+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 8886555568889999999999999986544
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.37 E-value=1.2e-12 Score=133.31 Aligned_cols=106 Identities=25% Similarity=0.252 Sum_probs=78.0
Q ss_pred CcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccc
Q 046275 426 LVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSN 505 (1176)
Q Consensus 426 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 505 (1176)
.+.+++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 456677777776 4555443 6677777777777766677777777777888888887766666777888888888888
Q ss_pred cccCCCCCccccCCCCCCeEEccCCcccc
Q 046275 506 NHLGGEIPTWIGQLSNLAILKLSNNSFYG 534 (1176)
Q Consensus 506 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 534 (1176)
|+|++..+..|..+++|++|+|++|++.+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 88886666677788888888888887764
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.34 E-value=2.5e-12 Score=131.34 Aligned_cols=104 Identities=23% Similarity=0.288 Sum_probs=74.2
Q ss_pred cEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeecccc
Q 046275 427 VSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNN 506 (1176)
Q Consensus 427 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 506 (1176)
+.+++++|+++ .+|..+. ++|+.|+|++|++++..|..|+++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45666666665 4555443 56777777777777666777777777777777777777665666777778888888888
Q ss_pred ccCCCCCccccCCCCCCeEEccCCccc
Q 046275 507 HLGGEIPTWIGQLSNLAILKLSNNSFY 533 (1176)
Q Consensus 507 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 533 (1176)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 887655556777888888888888776
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.33 E-value=4.6e-11 Score=139.53 Aligned_cols=330 Identities=14% Similarity=0.177 Sum_probs=150.3
Q ss_pred cCCCC-CCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCcccccccCCCCCc
Q 046275 141 LGSCS-SLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGDINVSKCKN 219 (1176)
Q Consensus 141 l~~l~-~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~~~~~~l~~ 219 (1176)
+.+|. .|+.+.+..+ ++.|+..+|..|.+|+.+.++.|.-+.+..+...+|.+|.+|+.+.+..+
T Consensus 59 F~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~------------- 124 (394)
T 4gt6_A 59 FCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS------------- 124 (394)
T ss_dssp TTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-------------
T ss_pred ccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-------------
Confidence 44553 4777777643 67777777777777777777766533333455566666666555544332
Q ss_pred cceeeccCCcccccC-CCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhh
Q 046275 220 LQFLDVSSNNFSMAV-PSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLAD 298 (1176)
Q Consensus 220 L~~L~Ls~N~l~~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~ 298 (1176)
++.+. ..|..+.+|+.+.+..+ ++.+...+|..+.+|+.+.+..+ ++ .+....+.
T Consensus 125 ----------~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~------------~I~~~aF~ 180 (394)
T 4gt6_A 125 ----------VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VT------------AIEERAFT 180 (394)
T ss_dssp ----------CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CC------------EECTTTTT
T ss_pred ----------cceehhhhhhhhcccccccccce-eeeecccceecccccccccccce-ee------------Eecccccc
Confidence 22122 23455555555555432 23344445555555555555433 11 11122222
Q ss_pred cCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCE
Q 046275 299 LCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLET 378 (1176)
Q Consensus 299 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 378 (1176)
. .+|+.+.+..+-.. ....+|.++.+|+......+... .+....+........-.. .+.....+..
T Consensus 181 ~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 246 (394)
T 4gt6_A 181 G-TALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYP-AIDNVLYEKSANGDYALI-----------RYPSQREDPA 246 (394)
T ss_dssp T-CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSC-BSSSCEEEECTTSCEEEE-----------ECCTTCCCSE
T ss_pred c-cceeEEEECCcccc-cccchhhhccccceecccccccc-cccceeeccccccccccc-----------ccccccccce
Confidence 1 34455544433222 33345555555555555444332 111111111110000000 0001111111
Q ss_pred EEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccc
Q 046275 379 LDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLN 458 (1176)
Q Consensus 379 L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 458 (1176)
+.+ . +.++.....+|.++..|+.+.+..+..+ .....|.++++|+.+.+. +
T Consensus 247 ~~i--------------------------p-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~ 297 (394)
T 4gt6_A 247 FKI--------------------------P-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-S 297 (394)
T ss_dssp EEC--------------------------C-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-T
T ss_pred EEc--------------------------C-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-C
Confidence 111 1 0111122334455555555555443322 333445555555555553 2
Q ss_pred cccCCCCCCCCCccccceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCC
Q 046275 459 QLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPP 538 (1176)
Q Consensus 459 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 538 (1176)
.++......|.++.+|+.++|..+ ++.+...+|.++.+|+.+.+..+ ++..-..+|.++++|+.+++.+|.... .
T Consensus 298 ~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~ 372 (394)
T 4gt6_A 298 RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---N 372 (394)
T ss_dssp TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---H
T ss_pred cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---h
Confidence 333333445556666666666543 44344556666666776666544 443445566666777777776665431 3
Q ss_pred CCCCCCCCCEEEccCCCC
Q 046275 539 ELGDCRSLIWLDLNTNLF 556 (1176)
Q Consensus 539 ~~~~l~~L~~L~L~~N~l 556 (1176)
.+..+.+|+.+.+..|.+
T Consensus 373 ~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 373 AISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TCBCCCCC----------
T ss_pred hhhccCCCCEEEeCCCCE
Confidence 455566676666655543
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.31 E-value=5.9e-11 Score=138.61 Aligned_cols=284 Identities=14% Similarity=0.184 Sum_probs=175.3
Q ss_pred ccCCCCCcEEEcCCCc---CCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhhhcCCCccEEEccCCcc
Q 046275 237 FGDCLALEYLDISANK---FTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLADLCSSLVKLDLSSNNL 313 (1176)
Q Consensus 237 l~~l~~L~~L~Ls~N~---l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~~~l~~L~~L~L~~n~l 313 (1176)
|.+|++|+.+.++.|. ++.+...+|.++.+|+.+.+..+ ++ .++...+..+.+|+.+.+..+ +
T Consensus 83 F~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~------------~I~~~aF~~c~~L~~i~lp~~-~ 148 (394)
T 4gt6_A 83 FYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VT------------EIDSEAFHHCEELDTVTIPEG-V 148 (394)
T ss_dssp TTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CS------------EECTTTTTTCTTCCEEECCTT-C
T ss_pred hhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cc------------eehhhhhhhhcccccccccce-e
Confidence 4445555555544432 33344455555555555544332 11 233344455566666666533 2
Q ss_pred cccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCCEEEccCCcCCCCCCcc
Q 046275 314 SGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLETLDLSSNNLSGAIPHN 393 (1176)
Q Consensus 314 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 393 (1176)
.......|..+.+|+.+.+..+ ++ .+....|.. ..|+.+.+..+-.. ....++.++.+++......+... .+...
T Consensus 149 ~~I~~~~F~~c~~L~~i~~~~~-~~-~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~-~~~~~ 223 (394)
T 4gt6_A 149 TSVADGMFSYCYSLHTVTLPDS-VT-AIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYP-AIDNV 223 (394)
T ss_dssp CEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSC-BSSSC
T ss_pred eeecccceecccccccccccce-ee-Eeccccccc-cceeEEEECCcccc-cccchhhhccccceecccccccc-cccce
Confidence 3244556777777777777654 33 555566643 56777777654332 44566677777777766655443 12111
Q ss_pred ccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeecccccccCCCCCCCCCccc
Q 046275 394 LCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQT 473 (1176)
Q Consensus 394 ~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 473 (1176)
++.. +.........+.....+..+.+. +.++..-...|.++..|+.+.+..+... .....|.++.+
T Consensus 224 ~~~~------------~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~ 289 (394)
T 4gt6_A 224 LYEK------------SANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPA 289 (394)
T ss_dssp EEEE------------CTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTT
T ss_pred eecc------------cccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccc
Confidence 1110 00000000111222344555554 3344345667889999999999766544 66678899999
Q ss_pred cceeecccccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccC
Q 046275 474 LETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNT 553 (1176)
Q Consensus 474 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 553 (1176)
|+.+.+. +.++.+...+|.++.+|+.++|.++ ++.....+|.++.+|+.+.|..+ ++..-..+|.+|++|+.+++.+
T Consensus 290 L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~ 366 (394)
T 4gt6_A 290 LQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSG 366 (394)
T ss_dssp CCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESS
T ss_pred cccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECC
Confidence 9999996 5676567788999999999999876 66456778999999999999765 6644567899999999999998
Q ss_pred CCC
Q 046275 554 NLF 556 (1176)
Q Consensus 554 N~l 556 (1176)
|..
T Consensus 367 ~~~ 369 (394)
T 4gt6_A 367 SRS 369 (394)
T ss_dssp CHH
T ss_pred cee
Confidence 754
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.20 E-value=3e-11 Score=138.63 Aligned_cols=113 Identities=18% Similarity=0.122 Sum_probs=86.8
Q ss_pred eeecccc-cccCCCCCCCCCccccceeeccc-ccccCccccccccCCCCCeeeccccccCCCCCccccCCCCCCeEEccC
Q 046275 452 DLKLWLN-QLHGEIPPELGNIQTLETLFLDF-NELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSN 529 (1176)
Q Consensus 452 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 529 (1176)
.++++++ .|+ .+|. +..+++|++|+|++ |+|++..+..|.++++|++|+|++|+|++..|..|+.|++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3455555 566 4666 77777888888885 888877778888888888888888888888888888888888899999
Q ss_pred CcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHhh
Q 046275 530 NSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFKQ 567 (1176)
Q Consensus 530 N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~ 567 (1176)
|+|++..|..+..++ |+.|+|++|+|.+...-..|..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~ 126 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQR 126 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHH
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHH
Confidence 888855555565555 9999999999987766555543
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.19 E-value=6.8e-13 Score=152.87 Aligned_cols=86 Identities=16% Similarity=0.219 Sum_probs=38.0
Q ss_pred CCccEEEccCCcccccCCccc-----cCCCCCcEEEccCCcCcccCCHH----HHhcCCCCCEEEccCcccCCC----Cc
Q 046275 301 SSLVKLDLSSNNLSGKVPSRF-----GSCSSLESFDISSNKFSGELPIE----IFLSMSNLKELVLSFNDFTGA----LP 367 (1176)
Q Consensus 301 ~~L~~L~L~~n~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~i~~~----~~~~l~~L~~L~Ls~N~l~~~----~p 367 (1176)
++|++|+|++|.++......+ ...++|++|+|++|.|++ .... .+..+++|++|+|++|.|++. ++
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~-~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~ 204 (372)
T 3un9_A 126 LRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTA-AGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLA 204 (372)
T ss_dssp HTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHH-HHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHH
T ss_pred HhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCCh-HHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHH
Confidence 345555555555543222222 233455555555555541 1111 123445555555555555431 13
Q ss_pred ccccCCCCCCEEEccCCcCC
Q 046275 368 DSLSNLTNLETLDLSSNNLS 387 (1176)
Q Consensus 368 ~~l~~l~~L~~L~Ls~N~l~ 387 (1176)
..+...++|++|+|++|.++
T Consensus 205 ~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 205 AQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp HHGGGCSCCCEEECCSSCCC
T ss_pred HHHhcCCCcCeEECCCCCCC
Confidence 33444445555555555544
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=2.2e-13 Score=157.03 Aligned_cols=63 Identities=17% Similarity=0.224 Sum_probs=29.4
Q ss_pred CCccEEEccCCcccccCCccc----c-CCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccC
Q 046275 301 SSLVKLDLSSNNLSGKVPSRF----G-SCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFT 363 (1176)
Q Consensus 301 ~~L~~L~L~~n~l~~~~p~~~----~-~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~ 363 (1176)
+.|+.|+|++|.++......+ . ..++|++|+|++|.+++.-...++..+++|++|+|++|.++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~ 139 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLG 139 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCC
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCC
Confidence 445555555555543222221 1 12456666666666642222222233445555555555554
No 405
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.13 E-value=1.7e-09 Score=125.48 Aligned_cols=126 Identities=13% Similarity=0.097 Sum_probs=71.3
Q ss_pred cCCCCCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCccc--ccccCCCCC
Q 046275 141 LGSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVT--GDINVSKCK 218 (1176)
Q Consensus 141 l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~--~~~~~~~l~ 218 (1176)
.....+|+.+.+.. .++.|+..+|..|.+|+.++|..+ ++. +...+|.++ +|+.+.+..+ ++ +..++..+
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~---Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~- 113 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTS---IGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT- 113 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCE---ECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceE---echhhhcCC-CCceEECCce-eeEeccceeccC-
Confidence 44455666666653 467777777777777777777643 443 566667766 5666665543 22 23334433
Q ss_pred ccceeeccCCcccccCCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeecccc
Q 046275 219 NLQFLDVSSNNFSMAVPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNL 276 (1176)
Q Consensus 219 ~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~ 276 (1176)
+|+.+.+..+-..-....|.++ +|+.+.+..+ ++.+...++..+.+++.+.+..+.
T Consensus 114 ~L~~i~lp~~~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~ 169 (379)
T 4h09_A 114 DLDDFEFPGATTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNN 169 (379)
T ss_dssp CCSEEECCTTCCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTC
T ss_pred CcccccCCCccccccccccccc-eeeeeeccce-eeccccchhccccccccccccccc
Confidence 6777777654222112234443 4555555543 444455567777777777766544
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.13 E-value=1.3e-10 Score=127.60 Aligned_cols=146 Identities=12% Similarity=0.020 Sum_probs=114.8
Q ss_pred HHHhcCCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcC-CCCcccceeEEeeCCeeEEE
Q 046275 856 LEATNGFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIK-HRNLVPLLGYCKVGEERLLV 934 (1176)
Q Consensus 856 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV 934 (1176)
.....+|++...++.|+.+.||++... ++.+++|............+.+|+.+++.+. +..+.++++++...+..|+|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 344467888888899999999999754 7899999886432233456889999999984 67788999999998999999
Q ss_pred EeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 046275 935 YEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNC---------------------------------- 980 (1176)
Q Consensus 935 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---------------------------------- 980 (1176)
|||++|.++.+.+.. ......++.+++++++.||+..
T Consensus 89 ~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 89 MSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 999999998876321 1223467889999999999810
Q ss_pred ----------------------CCCeeeCCCCCCCEEECCCCcEEEEeecccc
Q 046275 981 ----------------------IPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1011 (1176)
Q Consensus 981 ----------------------~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 1011 (1176)
.+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876667899998764
No 407
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.11 E-value=9.6e-11 Score=134.35 Aligned_cols=102 Identities=24% Similarity=0.208 Sum_probs=49.6
Q ss_pred EEccCc-cccCCCCccccccccCcEEEcCC-ccccCCCCccccCCCccCeeecccccccCCCCCCCCCccccceeecccc
Q 046275 405 LFLQNN-LLLGSIPSTLSNCSQLVSLHLSF-NYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFN 482 (1176)
Q Consensus 405 L~L~~N-~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 482 (1176)
++++++ +|+ .+|. +..+++|+.|+|++ |+|++..|..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455554 454 2444 55555555555553 5555444444555555555555555555444444445555555555555
Q ss_pred cccCccccccccCCCCCeeeccccccC
Q 046275 483 ELTGTLPAALSNCTNLNWISLSNNHLG 509 (1176)
Q Consensus 483 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 509 (1176)
+|++..+..|..++ |+.|+|++|.|.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 55433333333333 444444444444
No 408
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.92 E-value=7.2e-10 Score=121.32 Aligned_cols=136 Identities=13% Similarity=0.060 Sum_probs=99.2
Q ss_pred CCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCC--cccceeEEeeCCeeEEEEeec
Q 046275 861 GFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRN--LVPLLGYCKVGEERLLVYEYM 938 (1176)
Q Consensus 861 ~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~E~~ 938 (1176)
+|.+..+.+.|..+.||++...+|+.+++|..... ....+.+|+.+++.+.+.+ +.+++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34443333455669999998777888999986532 2345788999999986544 566888888778899999999
Q ss_pred cCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 046275 939 RYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNC-------------------------------------- 980 (1176)
Q Consensus 939 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-------------------------------------- 980 (1176)
+|.++. ... .+ ...++.++++.++.||+..
T Consensus 98 ~G~~l~--~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 98 PGQDLL--SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp SSEETT--TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred CCcccC--cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 998874 211 11 2256677778888888642
Q ss_pred -----------------CCCeeeCCCCCCCEEECCCCcEEEEeecccc
Q 046275 981 -----------------IPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1011 (1176)
Q Consensus 981 -----------------~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 1011 (1176)
...++|+|++|.||++++++.+.++|||.+.
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999887667899999875
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.88 E-value=7.5e-08 Score=111.57 Aligned_cols=290 Identities=16% Similarity=0.163 Sum_probs=146.3
Q ss_pred ccCCCCCCcEEecCCCCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCcccc-cccCCCCC
Q 046275 140 YLGSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTG-DINVSKCK 218 (1176)
Q Consensus 140 ~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~-~~~~~~l~ 218 (1176)
++.+|.+|+.++|..+ ++.++..+|..+ +|+.+.+..+ ++. +...+|.++ +|+.+.+..+-..- ...+..+
T Consensus 64 aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~---I~~~aF~~~-~L~~i~lp~~~~~i~~~~F~~~- 135 (379)
T 4h09_A 64 NFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKK---FGDYVFQGT-DLDDFEFPGATTEIGNYIFYNS- 135 (379)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCE---ECTTTTTTC-CCSEEECCTTCCEECTTTTTTC-
T ss_pred HhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeE---eccceeccC-CcccccCCCccccccccccccc-
Confidence 4677788888888644 777777788777 6777776543 332 566677665 68888877653332 2334333
Q ss_pred ccceeeccCCccccc-CCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeeccccccCccCCCCccccCcchhhhh
Q 046275 219 NLQFLDVSSNNFSMA-VPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFSGPIPVGYNEFQGEIPLHLA 297 (1176)
Q Consensus 219 ~L~~L~Ls~N~l~~~-~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~i~~~~~ 297 (1176)
+|+.+.+..+ ++.+ ...+..+..++.+.+..+.........+. .........+ +
T Consensus 136 ~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----------------------~ 190 (379)
T 4h09_A 136 SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVL-YNKNKTILES-----------------------Y 190 (379)
T ss_dssp CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEE-EETTSSEEEE-----------------------C
T ss_pred eeeeeeccce-eeccccchhcccccccccccccccceeeccccee-cccccceecc-----------------------c
Confidence 4555555443 3322 23467777888777776543311111000 0000000000 0
Q ss_pred hcCCCccEEEccCCcccccCCccccCCCCCcEEEccCCcCcccCCHHHHhcCCCCCEEEccCcccCCCCcccccCCCCCC
Q 046275 298 DLCSSLVKLDLSSNNLSGKVPSRFGSCSSLESFDISSNKFSGELPIEIFLSMSNLKELVLSFNDFTGALPDSLSNLTNLE 377 (1176)
Q Consensus 298 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~i~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 377 (1176)
..+..+..+.+....-. .....+....+|+.+.+..+ +. .++...|.++..|+.+.+..+ ++.....+|.++.+|+
T Consensus 191 ~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~ 266 (379)
T 4h09_A 191 PAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VT-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALK 266 (379)
T ss_dssp CTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CC-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCC
T ss_pred cccccccccccccceeE-Eeecccccccccceeeeccc-ee-EEccccccCCccceEEEcCCC-ccEeCccccceeehhc
Confidence 01122333333222111 23334444455555555433 22 344444555555555555443 3323344455555555
Q ss_pred EEEccCCcCCCCCCccccCCCCCCccEEEccCccccCCCCccccccccCcEEEcCCccccCCCCccccCCCccCeeeccc
Q 046275 378 TLDLSSNNLSGAIPHNLCQGPRNSLKELFLQNNLLLGSIPSTLSNCSQLVSLHLSFNYLTGTIPSSLGSLSKLQDLKLWL 457 (1176)
Q Consensus 378 ~L~Ls~N~l~~~~p~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 457 (1176)
.+.+..+ ++ .++...+ ..+.+|+.+.+.++.++.....+|.++.+|+.++|..+ ++.+-..+|.++++|+.+.+..
T Consensus 267 ~i~l~~~-i~-~i~~~aF-~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 267 TLNFYAK-VK-TVPYLLC-SGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp EEEECCC-CS-EECTTTT-TTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred ccccccc-ce-ecccccc-ccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 5555433 22 2222222 22445666666555555444566777777777777643 5534455677777777777654
Q ss_pred ccccCCCCCCCCCc
Q 046275 458 NQLHGEIPPELGNI 471 (1176)
Q Consensus 458 N~l~~~~p~~~~~l 471 (1176)
+ ++..-...|.+.
T Consensus 343 ~-v~~I~~~aF~~c 355 (379)
T 4h09_A 343 S-ITLIESGAFEGS 355 (379)
T ss_dssp T-CCEECTTTTTTS
T ss_pred c-cCEEchhHhhCC
Confidence 3 443344455554
No 410
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.76 E-value=4.8e-09 Score=117.65 Aligned_cols=187 Identities=19% Similarity=0.204 Sum_probs=122.6
Q ss_pred CceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcC-CCC--cccceeEEeeCC---eeEEEEeec
Q 046275 865 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIK-HRN--LVPLLGYCKVGE---ERLLVYEYM 938 (1176)
Q Consensus 865 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lV~E~~ 938 (1176)
.+.++.|....||++. ..+++|.... ......+.+|..+++.+. +.. +.+++.+..... ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~--~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH--SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS--HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC--cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4579999999999874 5688887532 123467889999999884 333 344544433333 348999999
Q ss_pred cCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhc---------------------------------------
Q 046275 939 RYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHN--------------------------------------- 979 (1176)
Q Consensus 939 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~--------------------------------------- 979 (1176)
+|.++.+.... .++..++..++.++++.++.||+.
T Consensus 99 ~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 99 KGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 99888653321 467778888889999999988861
Q ss_pred ----------------CCCCeeeCCCCCCCEEECC--CCcEEEEeecccccccccccccccccc---c---------cCC
Q 046275 980 ----------------CIPHIIHRDMKSSNVLLDE--NFEARVSDFGMARLMSAMDTHLSVSTL---A---------GTP 1029 (1176)
Q Consensus 980 ----------------~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~~~~---~---------gt~ 1029 (1176)
..+.++|+|++|.||++++ +..+.++||+.+........-...... . ...
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 1135899999999999988 556899999988654321100000000 0 000
Q ss_pred cccC-ccccCCCCCCchhhhHHHHHHHHHHHcCCCCC
Q 046275 1030 GYVP-PEYYQSFRCSTKGDVYSYGVVLLELLTGKRPT 1065 (1176)
Q Consensus 1030 ~y~a-PE~~~~~~~~~~~DvwSlGvil~elltg~~P~ 1065 (1176)
++.. |+.... .....+.|++|.++|.+.+|+.+|
T Consensus 253 ~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1112 222111 122368999999999999998775
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.73 E-value=1e-08 Score=117.96 Aligned_cols=143 Identities=15% Similarity=0.172 Sum_probs=106.8
Q ss_pred CCceEeEeCceEEEEEEECCCCEEEEEEee--ccC-CcCHHHHHHHHHHHHhcC--CCCcccceeEEeeC---CeeEEEE
Q 046275 864 NDSLIGSGGFGDVYKAKLKDGSTVAIKKLI--HIS-GQGDREFTAEMETIGKIK--HRNLVPLLGYCKVG---EERLLVY 935 (1176)
Q Consensus 864 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lV~ 935 (1176)
..+.++.|.++.||+++.. +..+++|+.. ... ......+.+|+.+++.+. +..+++++.++.+. +..|+||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 3567899999999999875 5678888764 221 122356888999999997 45688888888766 4589999
Q ss_pred eeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 046275 936 EYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNC----------------------------------- 980 (1176)
Q Consensus 936 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----------------------------------- 980 (1176)
||++|..+.+.. ...++..++..++.+++++|+.||+..
T Consensus 121 e~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 121 EFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp ECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 999997764311 113678888999999999999999831
Q ss_pred --------------------CCCeeeCCCCCCCEEECCCCc--EEEEeecccccc
Q 046275 981 --------------------IPHIIHRDMKSSNVLLDENFE--ARVSDFGMARLM 1013 (1176)
Q Consensus 981 --------------------~~~ivH~Dlkp~NIll~~~~~--~kl~DfGla~~~ 1013 (1176)
.+.++|||+++.||+++.++. +.|+||+.+...
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 246999999999999987653 699999988753
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.69 E-value=9e-09 Score=117.31 Aligned_cols=62 Identities=13% Similarity=0.201 Sum_probs=29.3
Q ss_pred CCccEEEcccCcCccCCCcccc---ccccceeeeccCcccccc----CCccccCcCcccEEEccCcccc
Q 046275 636 GSMMFLDISYNMLSGSIPKEIG---SMSYLFILNLGHNNLSGP----IPTEVGDLRGLNILDLSSNRLE 697 (1176)
Q Consensus 636 ~~l~~LdLs~N~l~g~iP~~~~---~l~~L~~L~L~~N~l~g~----iP~~~~~L~~L~~L~Ls~N~l~ 697 (1176)
++|++|+|++|.+++..+..+. .+++|+.|+|+.|++++. ++..+..+++|+.|+|++|.|+
T Consensus 252 p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 252 PNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 3455555555555533322222 344555555555555432 3333344455555555555544
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.68 E-value=5.3e-09 Score=119.20 Aligned_cols=83 Identities=18% Similarity=0.222 Sum_probs=47.4
Q ss_pred CCccCeeecccccccCCCCCCC---CCccccceeecccccccCc----cccccccCCCCCeeeccccccCCCCCccccC-
Q 046275 447 LSKLQDLKLWLNQLHGEIPPEL---GNIQTLETLFLDFNELTGT----LPAALSNCTNLNWISLSNNHLGGEIPTWIGQ- 518 (1176)
Q Consensus 447 l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~- 518 (1176)
+++|+.|+|.+|.+.+..+..+ ..+++|++|+|+.|.|++. ++..+.++++|+.|+|++|.++...-..+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 4555555555555543222111 2356777777777777653 3344456677888888888776443333332
Q ss_pred CCCCCeEEccCCc
Q 046275 519 LSNLAILKLSNNS 531 (1176)
Q Consensus 519 l~~L~~L~L~~N~ 531 (1176)
+ ...+++++|+
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 2 3567777776
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.62 E-value=3e-09 Score=114.88 Aligned_cols=19 Identities=11% Similarity=-0.213 Sum_probs=13.7
Q ss_pred CcccceeEeCCC--cEEEEec
Q 046275 55 PCGFKGVSCKAA--SVSSIDL 73 (1176)
Q Consensus 55 cC~W~gv~C~~~--~v~~l~L 73 (1176)
.|+|.|+.|+.. +|+.+..
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~ 97 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIIN 97 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEE
T ss_pred HHhcCcEEECCCCCEEEEEEe
Confidence 489999999864 5654444
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.38 E-value=2.2e-08 Score=103.06 Aligned_cols=99 Identities=21% Similarity=0.229 Sum_probs=58.1
Q ss_pred hhhhhcCcccccccccCCC-CCC--CcccCCCCCccccCccccccCCcccCCCC--CcccccCCCCCCcEEecCCCCCCc
Q 046275 85 VASFLLTLDTLETLSLKNS-NIS--GTISLPAGSRCSSFLSSLDLSLNILSGPL--SDISYLGSCSSLKVLNLSSNLLDF 159 (1176)
Q Consensus 85 ~~~~l~~~~~L~~L~L~~n-~l~--g~~~~~~~~~~~~~L~~LdLs~N~l~~~~--~~~~~l~~l~~L~~L~Ls~n~i~~ 159 (1176)
++..+...+.|++|+|++| .++ |...+...+...++|++|||++|.+.... .-...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 5677888888999999988 887 33333344445566777777777665211 111234455666666666666665
Q ss_pred cc----cccccccCCCcEEEc--cCCCCCC
Q 046275 160 SG----REAGSLKLSLEVLDL--SYNKISG 183 (1176)
Q Consensus 160 ~~----~~~~~~~~~L~~LdL--s~N~i~~ 183 (1176)
.+ ...+...++|++|+| ++|.|++
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 43 223334445666666 5555543
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.36 E-value=1.6e-06 Score=97.57 Aligned_cols=138 Identities=18% Similarity=0.214 Sum_probs=102.0
Q ss_pred CCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCC----CCcccceeEEeeCCeeEEEEe
Q 046275 861 GFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKH----RNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 861 ~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lV~E 936 (1176)
.+...+.++.|....||+. |+.+++|.... ......+.+|..+++.+.+ ..+.+++++ +..|+|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5566778999999999998 67788886532 1223568899999999866 224455544 56799999
Q ss_pred eccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCC-----------------------------------
Q 046275 937 YMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCI----------------------------------- 981 (1176)
Q Consensus 937 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~----------------------------------- 981 (1176)
|++|.++.+.... .++..++..++.++++.++.||+...
T Consensus 108 ~i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 108 YIKGERITYEQYH------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp CCCCBCCCHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ecCCccccccccc------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 9999888643311 35667777888888888888885422
Q ss_pred -------------------------CCeeeCCCCCCCEEECCCCcEEEEeeccccccc
Q 046275 982 -------------------------PHIIHRDMKSSNVLLDENFEARVSDFGMARLMS 1014 (1176)
Q Consensus 982 -------------------------~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 1014 (1176)
+.++|+|++|.||+++.+..+.++||+.+....
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999987667999999886543
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.28 E-value=1e-07 Score=97.97 Aligned_cols=118 Identities=14% Similarity=0.077 Sum_probs=60.7
Q ss_pred ccCCCCCCcEEecCCC-CCCcccc----ccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCCcccccccC
Q 046275 140 YLGSCSSLKVLNLSSN-LLDFSGR----EAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGNKVTGDINV 214 (1176)
Q Consensus 140 ~l~~l~~L~~L~Ls~n-~i~~~~~----~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n~l~~~~~~ 214 (1176)
.+..+++|++|+|++| .|+..+. ..+...++|++|+|++|.|.+...... ...+
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l---------------------~~~L 89 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFAL---------------------AEML 89 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHH---------------------HHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHH---------------------HHHH
Confidence 3556677777777777 6665431 222334455555555555543111000 0112
Q ss_pred CCCCccceeeccCCcccc-----cCCCccCCCCCcEEEc--CCCcCCCCc----ChhhhccccCCeEeecccccc
Q 046275 215 SKCKNLQFLDVSSNNFSM-----AVPSFGDCLALEYLDI--SANKFTGDV----GHAISACEHLSFLNVSSNLFS 278 (1176)
Q Consensus 215 ~~l~~L~~L~Ls~N~l~~-----~~~~l~~l~~L~~L~L--s~N~l~~~~----~~~l~~l~~L~~L~Ls~N~l~ 278 (1176)
...++|++|+|++|.|+. +...+...++|++|+| ++|.|++.. ...+...++|++|+|++|.+.
T Consensus 90 ~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 90 KVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 234455666666665542 2334555566666666 666666432 233444456666666666554
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.28 E-value=3.4e-07 Score=98.80 Aligned_cols=66 Identities=29% Similarity=0.385 Sum_probs=32.5
Q ss_pred ccccceeeeccCccccc--cCCccccCcCcccEEEccCccccccCCCCccccc--cccccccccccccCCCC
Q 046275 658 SMSYLFILNLGHNNLSG--PIPTEVGDLRGLNILDLSSNRLEGTIPSSMSSLT--LLNEIDLCNNQLTGMIP 725 (1176)
Q Consensus 658 ~l~~L~~L~L~~N~l~g--~iP~~~~~L~~L~~L~Ls~N~l~g~iP~~l~~l~--~L~~l~ls~N~l~g~~p 725 (1176)
++++|+.|+|++|+|++ .+|..++.+++|+.|+|++|+|++. ..+..+. +|++|+|++|++++.+|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 34445555555555554 3444445555555555555555532 2233333 55555555555555444
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.27 E-value=4.3e-06 Score=92.20 Aligned_cols=141 Identities=23% Similarity=0.249 Sum_probs=93.0
Q ss_pred CceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCC---CcccceeEEeeCCeeEEEEeeccCC
Q 046275 865 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHR---NLVPLLGYCKVGEERLLVYEYMRYG 941 (1176)
Q Consensus 865 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lV~E~~~~g 941 (1176)
.+.|+.|.++.||+++..+|+.++||+...........+.+|++.++.+++. .+++++++. ..++||||++++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 5689999999999999988999999986433333346789999999999765 577777763 369999999998
Q ss_pred CHH--------H---HHhhcccc--Cc---------------ccCHHHHHH---H-----------------HHHHHHHH
Q 046275 942 SLE--------D---VLHNQKKV--GI---------------KLNWAARRK---I-----------------AIGSARGL 973 (1176)
Q Consensus 942 sL~--------~---~l~~~~~~--~~---------------~l~~~~~~~---i-----------------~~~ia~~L 973 (1176)
++. + .+|..... +. .-+|..... + ...+-+.+
T Consensus 96 ~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~ 175 (288)
T 3d1u_A 96 PPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVL 175 (288)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 643 1 12322110 00 123432210 0 11111223
Q ss_pred HHHH----hcCCCCeeeCCCCCCCEEECCCCcEEEEeecccc
Q 046275 974 AFLH----HNCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1011 (1176)
Q Consensus 974 ~~LH----~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 1011 (1176)
+.+. ....+.++|+|+.+.||+++.+ .+.+.|| .+.
T Consensus 176 ~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 176 DALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 3333 1234679999999999999884 5889999 554
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.15 E-value=9.3e-06 Score=88.94 Aligned_cols=135 Identities=18% Similarity=0.151 Sum_probs=98.0
Q ss_pred eEeEeCce-EEEEEEEC-CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcC-CCCcccceeEEeeCCeeEEEEeeccCCCH
Q 046275 867 LIGSGGFG-DVYKAKLK-DGSTVAIKKLIHISGQGDREFTAEMETIGKIK-HRNLVPLLGYCKVGEERLLVYEYMRYGSL 943 (1176)
Q Consensus 867 ~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~~~~gsL 943 (1176)
.+..|.-| .||+.... ++..+++|+-.. ....++.+|...++.+. +--+.++++++.+.+..|+|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45556555 68988765 456788887532 23456888999999884 44477889999999999999999999888
Q ss_pred HHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 046275 944 EDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNC------------------------------------------- 980 (1176)
Q Consensus 944 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------------------- 980 (1176)
.+...... .....+..++++.++.||...
T Consensus 108 ~~~~~~~~--------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 108 FQVLEEYP--------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHCG--------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccCCH--------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 77654321 223445666677777777430
Q ss_pred ------------CCCeeeCCCCCCCEEECCCCcEEEEeeccccc
Q 046275 981 ------------IPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1012 (1176)
Q Consensus 981 ------------~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 1012 (1176)
.+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11379999999999999887778999997753
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.14 E-value=1e-05 Score=90.24 Aligned_cols=136 Identities=18% Similarity=0.164 Sum_probs=93.2
Q ss_pred CceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCC---CcccceeEEe-eCCeeEEEEeeccC
Q 046275 865 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHR---NLVPLLGYCK-VGEERLLVYEYMRY 940 (1176)
Q Consensus 865 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lV~E~~~~ 940 (1176)
.+.++.|....||+. |+.+++|... .......+.+|..+++.+.+. .+.+++.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 356888999999998 5778888742 222345788999999999752 3566666664 45567899999999
Q ss_pred CCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhc-----------------------------------------
Q 046275 941 GSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHN----------------------------------------- 979 (1176)
Q Consensus 941 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~----------------------------------------- 979 (1176)
.++.+..-. .++..++..++.++++.|+.||+.
T Consensus 98 ~~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 98 QILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp EECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred eECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 887663211 233444444555555555555532
Q ss_pred ----------------CCCCeeeCCCCCCCEEECC---CCc-EEEEeeccccc
Q 046275 980 ----------------CIPHIIHRDMKSSNVLLDE---NFE-ARVSDFGMARL 1012 (1176)
Q Consensus 980 ----------------~~~~ivH~Dlkp~NIll~~---~~~-~kl~DfGla~~ 1012 (1176)
..+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235799999999999987 455 58999997754
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.98 E-value=2.4e-05 Score=89.34 Aligned_cols=146 Identities=13% Similarity=0.141 Sum_probs=91.1
Q ss_pred CCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCC--cccceeEEeeC-CeeEEEEeec
Q 046275 862 FHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRN--LVPLLGYCKVG-EERLLVYEYM 938 (1176)
Q Consensus 862 y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lV~E~~ 938 (1176)
....+.++.|....+|+.+. +|+.+++|.... ...+.+|..+++.+.... +.++++++... +..|+||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~-----~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSC-----ADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESC-----CHHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCc-----hhhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 34456789999999999876 478888887632 236889999999986533 56777776654 5689999999
Q ss_pred cCCCHHHH------------------HhhccccC--------c-----ccCHHHH---------------------HHHH
Q 046275 939 RYGSLEDV------------------LHNQKKVG--------I-----KLNWAAR---------------------RKIA 966 (1176)
Q Consensus 939 ~~gsL~~~------------------l~~~~~~~--------~-----~l~~~~~---------------------~~i~ 966 (1176)
+|.++.+. +|...... . .-.|... ....
T Consensus 117 ~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 196 (362)
T 3ovc_A 117 QGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVA 196 (362)
T ss_dssp CSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccch
Confidence 98655321 11110000 0 0011111 0111
Q ss_pred HHHHHHHHHHHhc-CCCCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 967 IGSARGLAFLHHN-CIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 967 ~~ia~~L~~LH~~-~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
..+...+.++... ..+.++|+|+.+.||++++++.+.|+||+.+...
T Consensus 197 ~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 197 QALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 1122222233221 1146899999999999988777889999988653
No 423
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.92 E-value=1.4e-06 Score=88.78 Aligned_cols=122 Identities=18% Similarity=0.159 Sum_probs=63.3
Q ss_pred ccceeEeCCCcEEEEecCCccccccchhhhhhhcCcccccccccCCC-CCC--CcccCCCCCccccCccccccCCcccCC
Q 046275 57 GFKGVSCKAASVSSIDLSPFTLSVDFHLVASFLLTLDTLETLSLKNS-NIS--GTISLPAGSRCSSFLSSLDLSLNILSG 133 (1176)
Q Consensus 57 ~W~gv~C~~~~v~~l~L~~~~~~~~~~~~~~~l~~~~~L~~L~L~~n-~l~--g~~~~~~~~~~~~~L~~LdLs~N~l~~ 133 (1176)
.|.||..........+-.++..+++. .++..+.+.+.|++|+|++| .|+ |...+..++...+.|++|+|++|.|..
T Consensus 6 ~~~~~~k~~~~~~~~~e~~N~t~v~~-~l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd 84 (197)
T 1pgv_A 6 TFNGIMQSYVPRIVPDEPDNDTDVES-CINRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISD 84 (197)
T ss_dssp ---------------------CCHHH-HHHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBH
T ss_pred cccceecccccccCCCCCCCCCCHHH-HHHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCCh
Confidence 36776654432222333333333221 26677788899999999985 786 444445555666778888888887762
Q ss_pred --CCCcccccCCCCCCcEEecCCCCCCcccc----ccccccCCCcEEEccCC
Q 046275 134 --PLSDISYLGSCSSLKVLNLSSNLLDFSGR----EAGSLKLSLEVLDLSYN 179 (1176)
Q Consensus 134 --~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~----~~~~~~~~L~~LdLs~N 179 (1176)
...-...|...+.|+.|+|++|.|+..+. .+++....|++|+|++|
T Consensus 85 ~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 85 SEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 22222445566777777777777776552 23344445666666654
No 424
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.80 E-value=2.4e-05 Score=89.52 Aligned_cols=79 Identities=8% Similarity=-0.013 Sum_probs=54.7
Q ss_pred ceE-eEeCceEEEEEEEC-------CCCEEEEEEeeccC---CcCHHHHHHHHHHHHhcC-C--CCcccceeEEeeC---
Q 046275 866 SLI-GSGGFGDVYKAKLK-------DGSTVAIKKLIHIS---GQGDREFTAEMETIGKIK-H--RNLVPLLGYCKVG--- 928 (1176)
Q Consensus 866 ~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~--- 928 (1176)
+.| +.|....+|+.... +++.+++|...... ......+.+|+.+++.+. + ..+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 466 77888999998754 26678888654322 112245788999998884 3 3577788877654
Q ss_pred CeeEEEEeeccCCCHH
Q 046275 929 EERLLVYEYMRYGSLE 944 (1176)
Q Consensus 929 ~~~~lV~E~~~~gsL~ 944 (1176)
+..|+||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999986654
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.72 E-value=0.00016 Score=81.92 Aligned_cols=141 Identities=20% Similarity=0.273 Sum_probs=81.1
Q ss_pred ceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcC--CCCccccee------EEeeCCeeEEEEee
Q 046275 866 SLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIK--HRNLVPLLG------YCKVGEERLLVYEY 937 (1176)
Q Consensus 866 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~------~~~~~~~~~lV~E~ 937 (1176)
+.|+.|..+.||++...+| .+++|+... ...++..|..+++.+. .-.+.+++. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3456677899999987654 588887753 2344555666666553 113344443 22356778999999
Q ss_pred ccCCCHH--------------HHHhhccc-c--C-------cccCHHHH-------------------------------
Q 046275 938 MRYGSLE--------------DVLHNQKK-V--G-------IKLNWAAR------------------------------- 962 (1176)
Q Consensus 938 ~~~gsL~--------------~~l~~~~~-~--~-------~~l~~~~~------------------------------- 962 (1176)
++|.++. ..+|.... . . ....|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 11222111 0 0 00122211
Q ss_pred HHHHHHHHHHHHHHHh----------cCCCCeeeCCCCCCCEEECCCCcEEEEeecccc
Q 046275 963 RKIAIGSARGLAFLHH----------NCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1011 (1176)
Q Consensus 963 ~~i~~~ia~~L~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 1011 (1176)
..+...+.+++.+|+. .....++|+|+.+.||+++.++.+.++||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666663 123489999999999999888889999999764
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.69 E-value=1.2e-05 Score=80.40 Aligned_cols=84 Identities=12% Similarity=0.108 Sum_probs=55.0
Q ss_pred cCccccccCCcccCCCCCcccccCCCCCCcEEecCCC-CCCccccccccc----cCCCcEEEccCC-CCCCCCccccccc
Q 046275 119 SFLSSLDLSLNILSGPLSDISYLGSCSSLKVLNLSSN-LLDFSGREAGSL----KLSLEVLDLSYN-KISGANVVPWILF 192 (1176)
Q Consensus 119 ~~L~~LdLs~N~l~~~~~~~~~l~~l~~L~~L~Ls~n-~i~~~~~~~~~~----~~~L~~LdLs~N-~i~~~~~~~~~~f 192 (1176)
.+|++||||+|.++.. .+..+.+|++|+.|+|++| .|++-+...... +++|++|+|++| +||+... ..+
T Consensus 61 ~~L~~LDLs~~~Itd~--GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl---~~L 135 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSI--GFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI---IAL 135 (176)
T ss_dssp CCEEEEEEESCCCCGG--GGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH---HHG
T ss_pred ceEeEEeCcCCCccHH--HHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH---HHH
Confidence 4688888888887632 3355788888888888888 477665444333 346888888887 4765321 223
Q ss_pred cCCCCccEEEeCCCc
Q 046275 193 NGCDELKQLALKGNK 207 (1176)
Q Consensus 193 ~~~~~L~~L~L~~n~ 207 (1176)
..+++|++|++++|.
T Consensus 136 ~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 136 HHFRNLKYLFLSDLP 150 (176)
T ss_dssp GGCTTCCEEEEESCT
T ss_pred hcCCCCCEEECCCCC
Confidence 456666666666664
No 427
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.66 E-value=6e-06 Score=84.13 Aligned_cols=120 Identities=16% Similarity=0.102 Sum_probs=89.8
Q ss_pred eCCCcEEEEecCCc-cccccchh-hhhhhcCcccccccccCCCCCC--CcccCCCCCccccCccccccCCcccCCC--CC
Q 046275 63 CKAASVSSIDLSPF-TLSVDFHL-VASFLLTLDTLETLSLKNSNIS--GTISLPAGSRCSSFLSSLDLSLNILSGP--LS 136 (1176)
Q Consensus 63 C~~~~v~~l~L~~~-~~~~~~~~-~~~~l~~~~~L~~L~L~~n~l~--g~~~~~~~~~~~~~L~~LdLs~N~l~~~--~~ 136 (1176)
..+..++.|+|+.. .++..+.. ++..|...+.|+.|+|++|.|+ |+..+..++...+.|++|+|++|.|+.. ..
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 34457899999874 66654443 8888999999999999999999 5556666677789999999999999743 22
Q ss_pred cccccCCCCCCcEEecCCC---CCCccc----cccccccCCCcEEEccCCCCC
Q 046275 137 DISYLGSCSSLKVLNLSSN---LLDFSG----REAGSLKLSLEVLDLSYNKIS 182 (1176)
Q Consensus 137 ~~~~l~~l~~L~~L~Ls~n---~i~~~~----~~~~~~~~~L~~LdLs~N~i~ 182 (1176)
-...|...+.|++|+|++| .|..-. ..+++..+.|++|+++.|.+.
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 2256778889999999976 444322 234555678888888877654
No 428
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.59 E-value=0.00024 Score=82.39 Aligned_cols=75 Identities=13% Similarity=0.059 Sum_probs=49.7
Q ss_pred CceEeEeCceEEEEEEEC-CCCEEEEEEeeccCC-------cCHHHHHHHHHHHHhcCC--CC-cccceeEEeeCCeeEE
Q 046275 865 DSLIGSGGFGDVYKAKLK-DGSTVAIKKLIHISG-------QGDREFTAEMETIGKIKH--RN-LVPLLGYCKVGEERLL 933 (1176)
Q Consensus 865 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~n-iv~l~~~~~~~~~~~l 933 (1176)
.+.||.|..+.||+++.. +++.+++|....... .....+..|.++++.+.. |. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467899999999999754 478899997642211 123456789999988742 33 4455543 3455689
Q ss_pred EEeeccCC
Q 046275 934 VYEYMRYG 941 (1176)
Q Consensus 934 V~E~~~~g 941 (1176)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.51 E-value=3.6e-05 Score=76.85 Aligned_cols=85 Identities=9% Similarity=0.067 Sum_probs=51.5
Q ss_pred CCCcEEEcCCCcCCCCcChhhhccccCCeEeecccc-ccCccCCCCccccCcchhhhhh---cCCCccEEEccCCc-ccc
Q 046275 241 LALEYLDISANKFTGDVGHAISACEHLSFLNVSSNL-FSGPIPVGYNEFQGEIPLHLAD---LCSSLVKLDLSSNN-LSG 315 (1176)
Q Consensus 241 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~~i~~~~~~---~l~~L~~L~L~~n~-l~~ 315 (1176)
.+|++|||++|.|++..-..+..+++|++|+|++|. |++ ..-..+.. .+++|++|+|++|. ++.
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD-----------~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD 129 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIED-----------GCLERLSQLENLQKSMLEMEIISCGNVTD 129 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCH-----------HHHHHHHTCHHHHHHCCEEEEESCTTCCH
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCH-----------HHHHHHHhcccccCCCCEEEcCCCCcCCH
Confidence 467777777777776665666777777777777774 442 11111221 12356777777663 654
Q ss_pred cCCccccCCCCCcEEEccCCc
Q 046275 316 KVPSRFGSCSSLESFDISSNK 336 (1176)
Q Consensus 316 ~~p~~~~~l~~L~~L~Ls~N~ 336 (1176)
..-..+..+++|++|+|+++.
T Consensus 130 ~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 130 KGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHHHHGGGCTTCCEEEEESCT
T ss_pred HHHHHHhcCCCCCEEECCCCC
Confidence 333456667777777777764
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.46 E-value=0.00076 Score=74.28 Aligned_cols=79 Identities=19% Similarity=0.209 Sum_probs=58.5
Q ss_pred CCCCCceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCC---CCcccceeEEeeCCeeEEEEee
Q 046275 861 GFHNDSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKH---RNLVPLLGYCKVGEERLLVYEY 937 (1176)
Q Consensus 861 ~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~lV~E~ 937 (1176)
...-.+.+|.|..+.||+.+..+|+.|++|+...........|.+|...|+.+.. --+.+++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 3444678999999999999999999999998654444445678899999998842 2345555542 34789999
Q ss_pred ccCCCH
Q 046275 938 MRYGSL 943 (1176)
Q Consensus 938 ~~~gsL 943 (1176)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987643
No 431
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.36 E-value=0.00059 Score=75.71 Aligned_cols=139 Identities=18% Similarity=0.205 Sum_probs=92.6
Q ss_pred CceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcC---CCCcccceeEEeeCCeeEEEEeeccCC
Q 046275 865 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIK---HRNLVPLLGYCKVGEERLLVYEYMRYG 941 (1176)
Q Consensus 865 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~E~~~~g 941 (1176)
.+.|+.|....+|+... +++.+++|.... .....+.+|...++.+. ...+++++++....+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~---~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINER---SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEG---GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCc---ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45789999999999875 477888887643 23567889999998884 367889999888888899999999987
Q ss_pred CHH--------H---HHhhccc---cCc---------------ccCHHHHH---HHHH----------------HHHH-H
Q 046275 942 SLE--------D---VLHNQKK---VGI---------------KLNWAARR---KIAI----------------GSAR-G 972 (1176)
Q Consensus 942 sL~--------~---~l~~~~~---~~~---------------~l~~~~~~---~i~~----------------~ia~-~ 972 (1176)
.+. + .+|.... .+. .-+|.... ++.. .++. .
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 542 1 2233211 110 12454322 1111 1111 1
Q ss_pred HHHHHh-cCCCCeeeCCCCCCCEEECCCCcEEEEeec
Q 046275 973 LAFLHH-NCIPHIIHRDMKSSNVLLDENFEARVSDFG 1008 (1176)
Q Consensus 973 L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 1008 (1176)
...|.. ...+.++|+|+.+.||+++.++ +.|.||.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223322 2246799999999999999887 8889974
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.29 E-value=0.00027 Score=82.57 Aligned_cols=78 Identities=13% Similarity=0.115 Sum_probs=49.5
Q ss_pred CCCeeeCCCCCCCEEECCCCcEEEEeecccccccccccccccccccc--CCcccCccccCCC---CCCchhhhHHHHHHH
Q 046275 981 IPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAG--TPGYVPPEYYQSF---RCSTKGDVYSYGVVL 1055 (1176)
Q Consensus 981 ~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~~DvwSlGvil 1055 (1176)
.+.++|+|++|.||+++.++ ++++||+.+......-. ...... ...|.+|+..... ......++......+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D---la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD---IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQT 306 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH---HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH---HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence 34799999999999998876 99999998875432111 111111 2346666655321 112345666888888
Q ss_pred HHHHcCC
Q 046275 1056 LELLTGK 1062 (1176)
Q Consensus 1056 ~elltg~ 1062 (1176)
|+.++++
T Consensus 307 ~~~y~~~ 313 (420)
T 2pyw_A 307 WNLFNKR 313 (420)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887654
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.95 E-value=0.0033 Score=70.34 Aligned_cols=159 Identities=12% Similarity=0.107 Sum_probs=88.4
Q ss_pred cCHHHHHHHhcCCCCC-----ceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCC--cccce
Q 046275 850 LTFADLLEATNGFHND-----SLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRN--LVPLL 922 (1176)
Q Consensus 850 ~~~~~~~~~~~~y~~~-----~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~ 922 (1176)
++.+++......|.+. +.|+.|....+|+....+| .+++|..... ....++..|+.+++.+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 4555555555556542 3466688899999987655 6778876532 12345667888877774212 33444
Q ss_pred eE------EeeCCeeEEEEeeccCCCHHH--------------HHhhcc-ccCcc-------cCHHHHHH----------
Q 046275 923 GY------CKVGEERLLVYEYMRYGSLED--------------VLHNQK-KVGIK-------LNWAARRK---------- 964 (1176)
Q Consensus 923 ~~------~~~~~~~~lV~E~~~~gsL~~--------------~l~~~~-~~~~~-------l~~~~~~~---------- 964 (1176)
.. ....+..++||+|++|..+.. .+|... ....+ ..|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 123466789999998854310 122110 00000 11222110
Q ss_pred --HHHHHHHHHHHHHhc----CCCCeeeCCCCCCCEEECCCCcEEEEeecccc
Q 046275 965 --IAIGSARGLAFLHHN----CIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1011 (1176)
Q Consensus 965 --i~~~ia~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 1011 (1176)
+...+.+.+++++.. ....++|+|+.+.||+++++..+.++||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011234455556532 13469999999999999987666899998764
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.93 E-value=0.0066 Score=68.02 Aligned_cols=143 Identities=13% Similarity=0.111 Sum_probs=83.3
Q ss_pred ceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCC--CcccceeE-----EeeCCeeEEEEeec
Q 046275 866 SLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHR--NLVPLLGY-----CKVGEERLLVYEYM 938 (1176)
Q Consensus 866 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~-----~~~~~~~~lV~E~~ 938 (1176)
..++ |....||+....+|+.+++|..... ......+..|..+++.+... .+++++.. ...++..++||||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~-~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCC-CCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4577 8888999988777778999987522 12456677888888877422 24445443 22355678899999
Q ss_pred cCCCHH-----HH---------Hhhcccc-----CcccCHHHH----HHH---------------HHHHHHHHHHHHhc-
Q 046275 939 RYGSLE-----DV---------LHNQKKV-----GIKLNWAAR----RKI---------------AIGSARGLAFLHHN- 979 (1176)
Q Consensus 939 ~~gsL~-----~~---------l~~~~~~-----~~~l~~~~~----~~i---------------~~~ia~~L~~LH~~- 979 (1176)
+|..+. .. +|..... ....++... ..+ ...+.+.++.+...
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 874321 11 1211100 001222211 001 11111223333321
Q ss_pred ---CCCCeeeCCCCCCCEEECCCCcEEEEeeccccc
Q 046275 980 ---CIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 1012 (1176)
Q Consensus 980 ---~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 1012 (1176)
....++|+|+++.||+++ + .+.++||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234689999999999999 4 899999987753
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.63 E-value=0.0062 Score=67.38 Aligned_cols=71 Identities=10% Similarity=0.016 Sum_probs=44.8
Q ss_pred CceEeEeCceEEEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCc-ccceeEEeeCCeeEEEEeec-cCCC
Q 046275 865 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNL-VPLLGYCKVGEERLLVYEYM-RYGS 942 (1176)
Q Consensus 865 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~E~~-~~gs 942 (1176)
.+.|+.|....+|+. +.+++|........ .....+|+.+++.+...++ .+++++ +.+.-++|+||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 578999999999998 56788876432111 1123568888887743333 455544 334457899999 6544
Q ss_pred H
Q 046275 943 L 943 (1176)
Q Consensus 943 L 943 (1176)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 436
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.55 E-value=0.013 Score=65.75 Aligned_cols=143 Identities=13% Similarity=0.109 Sum_probs=74.5
Q ss_pred ceEeEeCceE-EEEEEECCCCEEEEEEeeccCCcCHHHHHHHHHHHHhcCC--CCcccceeEEeeCCeeEEEEeeccCCC
Q 046275 866 SLIGSGGFGD-VYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKH--RNLVPLLGYCKVGEERLLVYEYMRYGS 942 (1176)
Q Consensus 866 ~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV~E~~~~gs 942 (1176)
+.|+.|+... +|+....+|+.+++|...... ..++..|+.+++.+.. -.+.+++.+..+.+ ++|||++.+.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3455554444 667665447777777543211 1334567777777642 23556666543333 78999998777
Q ss_pred HHHHHhhccc---------------------cCc-ccCHHHHH-------H-------------HHHHHHHHHHHHHh--
Q 046275 943 LEDVLHNQKK---------------------VGI-KLNWAARR-------K-------------IAIGSARGLAFLHH-- 978 (1176)
Q Consensus 943 L~~~l~~~~~---------------------~~~-~l~~~~~~-------~-------------i~~~ia~~L~~LH~-- 978 (1176)
+.+++..... ... .++..... . ....+.+.++.+..
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 7655432110 000 11111100 0 00011122222211
Q ss_pred -cCCCCeeeCCCCCCCEEECCC----CcEEEEeecccccc
Q 046275 979 -NCIPHIIHRDMKSSNVLLDEN----FEARVSDFGMARLM 1013 (1176)
Q Consensus 979 -~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfGla~~~ 1013 (1176)
.....++|||+.+.||+++.+ +.+.++||+.+...
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 123479999999999999874 67999999988653
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.34 E-value=0.0054 Score=71.43 Aligned_cols=72 Identities=17% Similarity=0.158 Sum_probs=49.0
Q ss_pred CceEeEeCceEEEEEEECC--------CCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCC-cccceeEEeeCCeeEEEE
Q 046275 865 DSLIGSGGFGDVYKAKLKD--------GSTVAIKKLIHISGQGDREFTAEMETIGKIKHRN-LVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 865 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~ 935 (1176)
.+.|+.|....||++...+ ++.+++|+.... .....+.+|..+++.+...+ ..++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3567888889999998753 478888876321 22255668999998885333 3566665532 3899
Q ss_pred eeccCCC
Q 046275 936 EYMRYGS 942 (1176)
Q Consensus 936 E~~~~gs 942 (1176)
||++|.+
T Consensus 152 e~l~G~~ 158 (429)
T 1nw1_A 152 EYIPSRP 158 (429)
T ss_dssp CCCCEEE
T ss_pred EEeCCcc
Confidence 9998643
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.21 E-value=0.0094 Score=67.84 Aligned_cols=142 Identities=13% Similarity=0.115 Sum_probs=82.3
Q ss_pred ceEeEeCceEEEEEEEC--------CCCEEEEEEeeccCCcCHHHHHHHHHHHHhcC-CCCcccceeEEeeCCeeEEEEe
Q 046275 866 SLIGSGGFGDVYKAKLK--------DGSTVAIKKLIHISGQGDREFTAEMETIGKIK-HRNLVPLLGYCKVGEERLLVYE 936 (1176)
Q Consensus 866 ~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E 936 (1176)
+.+..|-...+|++... +++.+++|+.-. .......+.+|..+++.+. +.-..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45667888889999864 247888887532 2234556779999998884 3334566666543 38999
Q ss_pred eccCCCHHH--------------H---Hhhccc-cCcccC--HHHHHHHHHHHHH-------------------HHHHHH
Q 046275 937 YMRYGSLED--------------V---LHNQKK-VGIKLN--WAARRKIAIGSAR-------------------GLAFLH 977 (1176)
Q Consensus 937 ~~~~gsL~~--------------~---l~~~~~-~~~~l~--~~~~~~i~~~ia~-------------------~L~~LH 977 (1176)
|++|.++.. . +|.... .+.... +.+..++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 998855431 1 111110 011122 3444445443321 223332
Q ss_pred ----hc-CCCCeeeCCCCCCCEEECCC----CcEEEEeeccccc
Q 046275 978 ----HN-CIPHIIHRDMKSSNVLLDEN----FEARVSDFGMARL 1012 (1176)
Q Consensus 978 ----~~-~~~~ivH~Dlkp~NIll~~~----~~~kl~DfGla~~ 1012 (1176)
.. ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 21 22368999999999999876 7899999998753
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.19 E-value=0.0063 Score=57.77 Aligned_cols=66 Identities=17% Similarity=0.152 Sum_probs=48.8
Q ss_pred CeeeccccccC-CCCCccccCCCCCCeEEccCCcccccCCCCCCCCCCCCEEEccCCCCcccCChhHHh
Q 046275 499 NWISLSNNHLG-GEIPTWIGQLSNLAILKLSNNSFYGRIPPELGDCRSLIWLDLNTNLFNGSIPPALFK 566 (1176)
Q Consensus 499 ~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~ 566 (1176)
..++.+++.|+ ..+|..+ .++|++|+|++|+|+...+..|..+++|+.|+|++|++.+..--..|.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~l~ 77 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVPLR 77 (130)
T ss_dssp TEEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHHHH
T ss_pred CEEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHHHH
Confidence 36777888776 3456443 246899999999998655667888999999999999998765444443
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.93 E-value=0.011 Score=56.13 Aligned_cols=56 Identities=14% Similarity=0.185 Sum_probs=43.1
Q ss_pred ceeeccCCccc--ccCCCccCCCCCcEEEcCCCcCCCCcChhhhccccCCeEeecccccc
Q 046275 221 QFLDVSSNNFS--MAVPSFGDCLALEYLDISANKFTGDVGHAISACEHLSFLNVSSNLFS 278 (1176)
Q Consensus 221 ~~L~Ls~N~l~--~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 278 (1176)
..++.++++++ .+|..+. .+|++|+|++|+|+.+.+..|..+++|++|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36788888887 6665432 46888888888888887788888888888888888764
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.82 E-value=0.017 Score=64.92 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=27.9
Q ss_pred CCeeeCCCCCCCEEECCCCcEEEEeecccccc
Q 046275 982 PHIIHRDMKSSNVLLDENFEARVSDFGMARLM 1013 (1176)
Q Consensus 982 ~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 1013 (1176)
..++|+|+.+.||+++.++.+.++||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 46999999999999998888999999877643
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.60 E-value=0.034 Score=65.00 Aligned_cols=74 Identities=14% Similarity=0.020 Sum_probs=46.8
Q ss_pred CceEeEeCceEEEEEEECC-CCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCCc-ccceeEEeeCCeeEEEEeeccCCC
Q 046275 865 DSLIGSGGFGDVYKAKLKD-GSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNL-VPLLGYCKVGEERLLVYEYMRYGS 942 (1176)
Q Consensus 865 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~E~~~~gs 942 (1176)
.+.|+.|-...+|++...+ +..+++|...... ...-+..+|..+++.+...++ .++++++. . .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 3568888889999998865 4678887663322 111123589999998865444 56666652 2 35999998744
Q ss_pred H
Q 046275 943 L 943 (1176)
Q Consensus 943 L 943 (1176)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.53 E-value=0.012 Score=67.12 Aligned_cols=72 Identities=15% Similarity=0.088 Sum_probs=42.9
Q ss_pred ceEeEeCceEEEEEEECC---------CCEEEEEEeeccCCcCHHHHHHHHHHHHhcCCCC-cccceeEEeeCCeeEEEE
Q 046275 866 SLIGSGGFGDVYKAKLKD---------GSTVAIKKLIHISGQGDREFTAEMETIGKIKHRN-LVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 866 ~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~ 935 (1176)
+.++.|....+|+....+ ++.+++|....... ...+...|..+++.+...+ +.++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 456778888999998754 26788886543211 1112467888888875333 44666543 2 37899
Q ss_pred eeccCCC
Q 046275 936 EYMRYGS 942 (1176)
Q Consensus 936 E~~~~gs 942 (1176)
||++|.+
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998754
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.48 E-value=0.088 Score=53.70 Aligned_cols=103 Identities=16% Similarity=0.123 Sum_probs=67.8
Q ss_pred CCHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeeccccccccccccc
Q 046275 941 GSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHL 1020 (1176)
Q Consensus 941 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 1020 (1176)
-||.+++...+ .+++++++|.++.|.+.+|.-.-.... + ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~---~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRLYN---QPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHHcC---CCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc---------
Confidence 38999998775 489999999999999998876622111 1 1233457899999999887763 1110
Q ss_pred cccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCC
Q 046275 1021 SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRP 1064 (1176)
Q Consensus 1021 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P 1064 (1176)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 -----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp --------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123466888764 3557889999999999999874444
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.78 E-value=0.046 Score=62.36 Aligned_cols=142 Identities=18% Similarity=0.172 Sum_probs=80.4
Q ss_pred ceEeEeCceEEEEEEECC--------CCEEEEEEeeccCCc------------------CHHHHHHHHHHHHhcC-CCCc
Q 046275 866 SLIGSGGFGDVYKAKLKD--------GSTVAIKKLIHISGQ------------------GDREFTAEMETIGKIK-HRNL 918 (1176)
Q Consensus 866 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~-h~ni 918 (1176)
+.|..|-...+|++...+ ++.|.++..-..... .......|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667778999988653 367777766332211 0112345888888884 4445
Q ss_pred ccceeEEeeCCeeEEEEeeccCCCHHH--------------H---Hhhccc-cCcccC--HHHHHHHHHHHH--------
Q 046275 919 VPLLGYCKVGEERLLVYEYMRYGSLED--------------V---LHNQKK-VGIKLN--WAARRKIAIGSA-------- 970 (1176)
Q Consensus 919 v~l~~~~~~~~~~~lV~E~~~~gsL~~--------------~---l~~~~~-~~~~l~--~~~~~~i~~~ia-------- 970 (1176)
.++++++.. .+|+||++|.+|.. . +|.... ...... +....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 677776542 28999998754321 1 111110 011122 223333333221
Q ss_pred --------------HHH----HHHHhc-CCCCeeeCCCCCCCEEECCC------CcEEEEeecccc
Q 046275 971 --------------RGL----AFLHHN-CIPHIIHRDMKSSNVLLDEN------FEARVSDFGMAR 1011 (1176)
Q Consensus 971 --------------~~L----~~LH~~-~~~~ivH~Dlkp~NIll~~~------~~~kl~DfGla~ 1011 (1176)
.-+ +++... ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223322 23358999999999999876 789999998764
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.92 E-value=0.13 Score=59.12 Aligned_cols=74 Identities=8% Similarity=0.009 Sum_probs=48.0
Q ss_pred CceEeEeCceEEEEEEECC--------CCEEEEEEeeccCCcCHHHHHHHHHHHHhcC-CCCcccceeEEeeCCeeEEEE
Q 046275 865 DSLIGSGGFGDVYKAKLKD--------GSTVAIKKLIHISGQGDREFTAEMETIGKIK-HRNLVPLLGYCKVGEERLLVY 935 (1176)
Q Consensus 865 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 935 (1176)
.+.+..|-...+|+....+ ++.+++++..... ...-+..+|..+++.+. +.-..++++.+. -++||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3467778889999998763 5788888753322 11223467888888884 333455555332 27899
Q ss_pred eeccCCCH
Q 046275 936 EYMRYGSL 943 (1176)
Q Consensus 936 E~~~~gsL 943 (1176)
||++|.++
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998653
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.43 E-value=1.3 Score=50.81 Aligned_cols=29 Identities=28% Similarity=0.452 Sum_probs=24.7
Q ss_pred eeeCCCCCCCEEE------CCCCcEEEEeeccccc
Q 046275 984 IIHRDMKSSNVLL------DENFEARVSDFGMARL 1012 (1176)
Q Consensus 984 ivH~Dlkp~NIll------~~~~~~kl~DfGla~~ 1012 (1176)
++|+|+.+.||++ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999998753
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=86.72 E-value=0.57 Score=34.22 Aligned_cols=11 Identities=27% Similarity=0.428 Sum_probs=4.7
Q ss_pred ccchhhhhHHH
Q 046275 774 LAGSIAMGLLF 784 (1176)
Q Consensus 774 l~~~i~~~~~~ 784 (1176)
++++++.|+++
T Consensus 13 IA~gVVgGv~~ 23 (44)
T 2ks1_B 13 IATGMVGALLL 23 (44)
T ss_dssp STHHHHHHHHH
T ss_pred EEeehhHHHHH
Confidence 44444444433
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=82.74 E-value=2.3 Score=43.26 Aligned_cols=115 Identities=6% Similarity=0.092 Sum_probs=77.9
Q ss_pred CCCCcccceeEEeeCCeeEEEEeeccCC-CHHHHHhhccccCcccCHHHHHHHHHHHHHHHHHHHhcCCCCeeeCCCCCC
Q 046275 914 KHRNLVPLLGYCKVGEERLLVYEYMRYG-SLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSS 992 (1176)
Q Consensus 914 ~h~niv~l~~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~ 992 (1176)
.||+++.. .+-.+++...+.|+.-+.+ ++.. ++ ..+...+++++..|+....++++. +|--+.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik-------~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK-------SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG-------GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH-------hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecc
Confidence 68888866 4555666666666654422 2222 22 478899999999999888666655 68889999
Q ss_pred CEEECCCCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCCC
Q 046275 993 NVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD 1066 (1176)
Q Consensus 993 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~~ 1066 (1176)
|++++.++.+++.=.|+-..+ +|. ..+...=.-.+=+++..++++++.|.
T Consensus 109 NL~f~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GEEECTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred eEEEcCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999877653222 222 11222233456678899999998863
No 450
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=82.60 E-value=0.83 Score=33.27 Aligned_cols=10 Identities=50% Similarity=0.770 Sum_probs=3.8
Q ss_pred hhhhHHHHhh
Q 046275 778 IAMGLLFSLF 787 (1176)
Q Consensus 778 i~~~~~~~~~ 787 (1176)
|+.|.+.+++
T Consensus 12 IA~gVVgGv~ 21 (44)
T 2l2t_A 12 IAAGVIGGLF 21 (44)
T ss_dssp HHHHHHHHHH
T ss_pred EEEeehHHHH
Confidence 3333333333
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=78.51 E-value=4 Score=41.74 Aligned_cols=114 Identities=12% Similarity=0.072 Sum_probs=76.1
Q ss_pred CCCCcccceeEEeeCCeeEEEEeeccCCCHHHHHhhccccCcccCHHHHHHHHHHHHHHHH-HHHhcCCCCeeeCCCCCC
Q 046275 914 KHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLA-FLHHNCIPHIIHRDMKSS 992 (1176)
Q Consensus 914 ~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~-~LH~~~~~~ivH~Dlkp~ 992 (1176)
.||++ -...-.+++...+.++.-+++.=+..++ .++...+++++..++.... +++.. +|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-------~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-------KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-------TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-------hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 68888 4444466777777777664443333343 4778999999999888766 55544 67889999
Q ss_pred CEEECCCCcEEEEeeccccccccccccccccccccCCcccCccccCCCCCCchhhhHHHHHHHHHHHcCCCCC
Q 046275 993 NVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPT 1065 (1176)
Q Consensus 993 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P~ 1065 (1176)
|+++|.++.+++.-.|+-.. ++|.- .+..-=.-.+=+++..++.+++.|
T Consensus 114 NL~f~~~~~p~i~hRGi~~~-------------------lpP~e-----~~ee~fl~qyKali~all~~K~~F 162 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKES-------------------LPPDE-----WDDERLLREVKATVLALTEGEYRF 162 (219)
T ss_dssp GEEECTTCCEEESCCEETTT-------------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCH
T ss_pred eEEEeCCCcEEEEEcCCccc-------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCH
Confidence 99999999999987775322 23332 122222335567788888887765
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=74.10 E-value=3.2 Score=36.73 Aligned_cols=48 Identities=19% Similarity=0.202 Sum_probs=29.4
Q ss_pred CCCCccccccccccCCCcEEEccCCCCCCCCccccccccCCCCccEEEeCCC
Q 046275 155 NLLDFSGREAGSLKLSLEVLDLSYNKISGANVVPWILFNGCDELKQLALKGN 206 (1176)
Q Consensus 155 n~i~~~~~~~~~~~~~L~~LdLs~N~i~~~~~~~~~~f~~~~~L~~L~L~~n 206 (1176)
..++.|+..+|.+|.+|+.+.+..+ ++. +...+|.+|.+|+.+.+.+.
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~---Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGL---LYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSC---CCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hhe---EcHHHHhccCCccEEEEcCC
Confidence 3456666677777777777766654 222 55556666666666666543
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=70.48 E-value=1.9 Score=31.36 Aligned_cols=17 Identities=18% Similarity=0.249 Sum_probs=10.1
Q ss_pred cccchhhhhHHHHhhhh
Q 046275 773 SLAGSIAMGLLFSLFCI 789 (1176)
Q Consensus 773 ~l~~~i~~~~~~~~~~~ 789 (1176)
.++++++.|+++.++++
T Consensus 11 aIA~gVVgGv~~v~ii~ 27 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVG 27 (44)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred eEEEeehHHHHHHHHHH
Confidence 46667666665555443
No 454
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=68.11 E-value=2.7 Score=30.67 Aligned_cols=24 Identities=21% Similarity=0.227 Sum_probs=15.6
Q ss_pred cchhhhhHHHHhhhhhhhhhhhhh
Q 046275 775 AGSIAMGLLFSLFCIFGLIIVVVE 798 (1176)
Q Consensus 775 ~~~i~~~~~~~~~~~~~~~~~~~~ 798 (1176)
..+|++|++.++++++.++..++.
T Consensus 10 ~~~IA~gVVgGv~~~~ii~~~~~~ 33 (44)
T 2ks1_B 10 IPSIATGMVGALLLLLVVALGIGL 33 (44)
T ss_dssp SSSSTHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEeehhHHHHHHHHHHHHHHH
Confidence 467888888878776555444333
No 455
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=54.11 E-value=1.7 Score=50.64 Aligned_cols=60 Identities=3% Similarity=-0.079 Sum_probs=17.5
Q ss_pred CCceEeEeCceEEEEEEECC-CCEEEE------EEeeccC--CcCHHHHHHHHHHHHhcCCCCcccceeEEe
Q 046275 864 NDSLIGSGGFGDVYKAKLKD-GSTVAI------KKLIHIS--GQGDREFTAEMETIGKIKHRNLVPLLGYCK 926 (1176)
Q Consensus 864 ~~~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 926 (1176)
+.+.|| ||.||+|.+.. ..+||| |+..... .+....+.+|..+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345666 99999998864 367888 6554321 222345788888999999999999988653
No 456
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=51.38 E-value=6.5 Score=30.90 Aligned_cols=18 Identities=33% Similarity=0.477 Sum_probs=11.9
Q ss_pred hhhhHHHHhhhhhhhhhh
Q 046275 778 IAMGLLFSLFCIFGLIIV 795 (1176)
Q Consensus 778 i~~~~~~~~~~~~~~~~~ 795 (1176)
+++|.+++++.++++.++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 566667777766666655
No 457
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=50.28 E-value=6.8 Score=28.48 Aligned_cols=14 Identities=14% Similarity=0.147 Sum_probs=6.4
Q ss_pred hhhhhHHHHhhhhhh
Q 046275 777 SIAMGLLFSLFCIFG 791 (1176)
Q Consensus 777 ~i~~~~~~~~~~~~~ 791 (1176)
+++.+++. +++++.
T Consensus 13 ~Ia~~vVG-vll~vi 26 (44)
T 2jwa_A 13 SIISAVVG-ILLVVV 26 (44)
T ss_dssp HHHHHHHH-HHHHHH
T ss_pred chHHHHHH-HHHHHH
Confidence 44555444 554433
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=41.82 E-value=19 Score=31.65 Aligned_cols=41 Identities=17% Similarity=0.104 Sum_probs=35.5
Q ss_pred cccCCCCCCcEEecCCCCCCccccccccccCCCcEEEccCCC
Q 046275 139 SYLGSCSSLKVLNLSSNLLDFSGREAGSLKLSLEVLDLSYNK 180 (1176)
Q Consensus 139 ~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~L~~LdLs~N~ 180 (1176)
..+.+|.+|+.+.|-.+ ++.|+..+|..|.+|+.+.+....
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 45789999999999875 888999999999999999987753
No 459
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=35.68 E-value=3.7e+02 Score=32.38 Aligned_cols=45 Identities=22% Similarity=0.160 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHH--HHHHHHhcCCCCeeeCCCCCCCEEECCCCcEEEEeecccc
Q 046275 960 AARRKIAIGSAR--GLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 1011 (1176)
Q Consensus 960 ~~~~~i~~~ia~--~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 1011 (1176)
..+..++..+|- .+.|+=.. +|=.++|||++.+|.+.=+|||.+.
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 455566665542 34444332 7889999999999999999999864
No 460
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=32.89 E-value=5.6e+02 Score=30.29 Aligned_cols=85 Identities=12% Similarity=0.101 Sum_probs=50.5
Q ss_pred ccceeEEeeCCeeEEEEeeccCCCHHHHH----------hhccccCc---ccCHHHHHHHHHHHHH--HHHHHHhcCCCC
Q 046275 919 VPLLGYCKVGEERLLVYEYMRYGSLEDVL----------HNQKKVGI---KLNWAARRKIAIGSAR--GLAFLHHNCIPH 983 (1176)
Q Consensus 919 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l----------~~~~~~~~---~l~~~~~~~i~~~ia~--~L~~LH~~~~~~ 983 (1176)
+..+.+........+ .|++++.++.+.+ ........ ...+..+..++...|- .+.|+=.-
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 444555544444443 5666654444444 33221111 1235666666666543 35555433
Q ss_pred eeeCCCCCCCEEECCCCcEEEEeecccc
Q 046275 984 IIHRDMKSSNVLLDENFEARVSDFGMAR 1011 (1176)
Q Consensus 984 ivH~Dlkp~NIll~~~~~~kl~DfGla~ 1011 (1176)
+|=.++|||++.+|++.=+|||.+.
T Consensus 477 ---gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 ---GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp ---CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred ---cCCCCcceeEcCCCCEeeeehHHhh
Confidence 6778999999999999999999874
No 461
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=32.48 E-value=17 Score=25.61 Aligned_cols=17 Identities=24% Similarity=0.667 Sum_probs=7.7
Q ss_pred hhhhhHHHHhhhhhhhh
Q 046275 777 SIAMGLLFSLFCIFGLI 793 (1176)
Q Consensus 777 ~i~~~~~~~~~~~~~~~ 793 (1176)
++++|.++++..+.+++
T Consensus 15 GiVvG~v~gv~li~~l~ 31 (38)
T 2k1k_A 15 AVIFGLLLGAALLLGIL 31 (38)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred eeehHHHHHHHHHHHHH
Confidence 44445544444444333
No 462
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=24.53 E-value=63 Score=22.73 Aligned_cols=24 Identities=21% Similarity=0.440 Sum_probs=14.9
Q ss_pred ccchhhhhHHHHhhhhhhhhhhhh
Q 046275 774 LAGSIAMGLLFSLFCIFGLIIVVV 797 (1176)
Q Consensus 774 l~~~i~~~~~~~~~~~~~~~~~~~ 797 (1176)
+.++.++|++++.++.++++....
T Consensus 8 ls~GaIAGiVvG~v~gv~li~~l~ 31 (38)
T 2k1k_A 8 LTGGEIVAVIFGLLLGAALLLGIL 31 (38)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeeeehHHHHHHHHHHHHH
Confidence 346677787777766555544443
Done!