Query         046280
Match_columns 266
No_of_seqs    186 out of 1169
Neff          4.6 
Searched_HMMs 29240
Date          Mon Mar 25 18:16:21 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046280.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046280hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1gcc_A Ethylene responsive ele  99.9 4.7E-24 1.6E-28  156.7   5.7   60   41-100     2-62  (63)
  2 1u3e_M HNH homing endonuclease  94.5  0.0017   6E-08   54.5  -3.5   54   25-82     93-146 (174)
  3 3igm_B PF14_0633 protein; AP2   90.9    0.12 4.3E-06   39.1   2.5   27   37-65      3-30  (77)
  4 1z1b_A Integrase; protein-DNA   82.5     1.5   5E-05   38.3   4.9   42   43-88     14-55  (356)
  5 3jtz_A Integrase; four strande  70.7     7.3 0.00025   29.3   5.2   44   45-88     28-75  (88)
  6 3ju0_A Phage integrase; four s  53.5      19 0.00064   28.1   4.8   44   45-88     28-75  (108)
  7 2ftc_I Mitochondrial ribosomal  40.0      36  0.0012   27.1   4.6   36   53-90     80-115 (118)
  8 1uta_A FTSN, MSGA, cell divisi  34.9      29   0.001   24.7   3.1   23   64-86     46-68  (81)
  9 3r8s_M 50S ribosomal protein L  33.6      36  0.0012   27.8   3.7   35   53-90     92-126 (136)
 10 1x60_A Sporulation-specific N-  33.1      24 0.00082   24.8   2.3   23   64-86     46-68  (79)
 11 1b69_A Protein (integrase); in  30.9      52  0.0018   24.1   3.8   29   38-67      8-36  (69)
 12 1ffk_F Ribosomal protein L10E;  30.1      56  0.0019   27.5   4.4   44   44-90     98-145 (157)
 13 1vq8_H 50S ribosomal protein L  29.3      36  0.0012   29.1   3.0   35   53-90    123-159 (171)
 14 2pa2_A 60S ribosomal protein L  23.0      37  0.0013   28.4   2.0   35   53-90     94-130 (151)
 15 2zkr_h 60S ribosomal protein L  21.2      63  0.0021   28.5   3.2   36   53-90    125-161 (214)
 16 2bn8_A CEDA, cell division act  20.7      49  0.0017   24.9   2.0   41   38-81     36-76  (87)

No 1  
>1gcc_A Ethylene responsive element binding factor 1; transcription factor, protein-DNA complex, ethylene inducible; HET: DNA; NMR {Arabidopsis thaliana} SCOP: d.10.1.2 PDB: 2gcc_A 3gcc_A
Probab=99.89  E-value=4.7e-24  Score=156.73  Aligned_cols=60  Identities=68%  Similarity=1.123  Sum_probs=56.6

Q ss_pred             ceeeEEeCCCCcEEEEEecCCC-CceEeccCCCCHHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 046280           41 RFLGVRRRPWGRYAAEIRDPAT-KERHWLGTFDTAEDAALAYDRAARSMRGSKARTNFVYS  100 (266)
Q Consensus        41 ~yrGV~~r~~GKW~A~I~~~~~-~kri~LGtF~T~EEAA~AYD~Aa~~~~G~~A~tNFp~s  100 (266)
                      +||||+++++|||+|+|+++.. |+++|||+|+|+||||+|||.|+++++|.++++|||.+
T Consensus         2 ~yrGV~~r~~gkw~A~I~~~~~~g~r~~LGtf~T~eeAA~AyD~Aa~~~~G~~a~~NFp~~   62 (63)
T 1gcc_A            2 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR   62 (63)
T ss_dssp             CCTTEEEETTTEEEEEEEETTTTSEEEEEEEESSHHHHHHHHHHHHHHHHSSCCCCSSCTT
T ss_pred             CcccEeeCCCCcEEEEEccccCCCeEEEeeeCCCHHHHHHHHHHHHHHhcCcccccCCCCc
Confidence            6999999899999999999864 79999999999999999999999999999999999864


No 2  
>1u3e_M HNH homing endonuclease; HNH catalytic motif, helix-turn-helix DNA binding domain, PR complex, DNA binding protein-DNA complex; 2.92A {Bacillus phage SPO1} SCOP: d.4.1.3 d.285.1.1
Probab=94.53  E-value=0.0017  Score=54.46  Aligned_cols=54  Identities=6%  Similarity=-0.111  Sum_probs=38.3

Q ss_pred             HHHHHHhhccCCCCCCceeeEEeCCCCcEEEEEecCCCCceEeccCCCCHHHHHHHHH
Q 046280           25 KQQQQQQQNHMRQDEIRFLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAEDAALAYD   82 (266)
Q Consensus        25 ~~qn~~n~~~~~~~tS~yrGV~~r~~GKW~A~I~~~~~~kri~LGtF~T~EEAA~AYD   82 (266)
                      +++|.+++.+.+.+.. ++||.+.+.++|.+.|.+  . +.++||.|.+.+|||++|.
T Consensus        93 ~~eN~~~~~~~~~~~~-~~g~~~~~~~k~~~vi~~--~-~~~~~~~f~s~~eAa~~~G  146 (174)
T 1u3e_M           93 QKINVENQMSRGTLNV-SKAQQIAKIKNQKPIIVI--S-PDGIEKEYPSTKCACEELG  146 (174)
T ss_dssp             HHHHHHHHHHHTCCCC-HHHHHHHHHHTCCCEEEE--C-TTSCEEEESCHHHHHHHHT
T ss_pred             HHHHhhcccccCcccc-eeeeeeccCCCCceEEEE--c-CCceEEeeCCHHHHHHHHC
Confidence            4566666655443322 467765335679999987  5 6778999999999999964


No 3  
>3igm_B PF14_0633 protein; AP2 domain, specific transcription FA protein-DNA complex, transcription-DNA complex; 2.20A {Plasmodium falciparum}
Probab=90.89  E-value=0.12  Score=39.08  Aligned_cols=27  Identities=19%  Similarity=0.143  Sum_probs=21.8

Q ss_pred             CCCCceeeEEeCC-CCcEEEEEecCCCCce
Q 046280           37 QDEIRFLGVRRRP-WGRYAAEIRDPATKER   65 (266)
Q Consensus        37 ~~tS~yrGV~~r~-~GKW~A~I~~~~~~kr   65 (266)
                      ...|+|+||+|.+ .+.|+|.-.+  +|++
T Consensus         3 ~~~Sg~pGVsw~kR~~~WlA~W~e--~g~r   30 (77)
T 3igm_B            3 HMSSGYPGVSWNKRMCAWLAFFYD--GASR   30 (77)
T ss_dssp             -CCSSSTTEEEETTTTEEEEEEEE--TTEE
T ss_pred             CCCCCCCcEEeecCCceEEEEEec--CCeE
Confidence            3579999999886 7999999997  5654


No 4  
>1z1b_A Integrase; protein-DNA complex, DNA binding protein/DNA complex; HET: PTR; 3.80A {Enterobacteria phage lambda} SCOP: d.10.1.4 d.163.1.1 PDB: 1z1g_A 1kjk_A 2wcc_3*
Probab=82.48  E-value=1.5  Score=38.30  Aligned_cols=42  Identities=19%  Similarity=0.050  Sum_probs=31.5

Q ss_pred             eeEEeCCCCcEEEEEecCCCCceEeccCCCCHHHHHHHHHHHHHHh
Q 046280           43 LGVRRRPWGRYAAEIRDPATKERHWLGTFDTAEDAALAYDRAARSM   88 (266)
Q Consensus        43 rGV~~r~~GKW~A~I~~~~~~kri~LGtF~T~EEAA~AYD~Aa~~~   88 (266)
                      .||++++.|+|+.++..  .||++.+|.  |.+||..+...+...+
T Consensus        14 ~~v~~~~~g~~~~r~~~--~gk~~~~g~--t~~eA~~~a~~~~~~~   55 (356)
T 1z1b_A           14 PNLYIRNNGYYCYRDPR--TGKEFGLGR--DRRIAITEAIQANIEL   55 (356)
T ss_dssp             TTEEEETTTEEEEECTT--TCCEEEEES--CHHHHHHHHHHHHHHH
T ss_pred             ccceecCCCeEEEEeec--CCeEEECCC--CHHHHHHHHHHHHHHH
Confidence            36777778899887654  788999996  8888877766555444


No 5  
>3jtz_A Integrase; four stranded beta-sheet, DNA binding protein; 1.30A {Yersinia pestis} PDB: 3rmp_A
Probab=70.72  E-value=7.3  Score=29.29  Aligned_cols=44  Identities=18%  Similarity=0.289  Sum_probs=31.0

Q ss_pred             EEeCCCC--cEEEEEecCCCCceEeccCCC--CHHHHHHHHHHHHHHh
Q 046280           45 VRRRPWG--RYAAEIRDPATKERHWLGTFD--TAEDAALAYDRAARSM   88 (266)
Q Consensus        45 V~~r~~G--KW~A~I~~~~~~kri~LGtF~--T~EEAA~AYD~Aa~~~   88 (266)
                      |+..+.|  .|+-+.+...+.+++-||.|.  |.+||....+++...+
T Consensus        28 L~V~psG~K~w~~ryr~~Gk~~~~~LG~yp~~sL~~AR~~a~~~r~~l   75 (88)
T 3jtz_A           28 LLVKPGGSRHWYLKYRISGKESRIALGAYPAISLSDARQQREGIRKML   75 (88)
T ss_dssp             EEECTTSCEEEEEEEEETTEEEEEEEEETTTSCHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCEEEEEEEEeCCeEEEEEeECCCCCCHHHHHHHHHHHHHHH
Confidence            4455554  498888873334578999997  5888888777766655


No 6  
>3ju0_A Phage integrase; four stranded beta-sheet, DNA binding protein; 1.60A {Pectobacterium atrosepticum}
Probab=53.53  E-value=19  Score=28.09  Aligned_cols=44  Identities=20%  Similarity=0.234  Sum_probs=30.3

Q ss_pred             EEeCCCC--cEEEEEecCCCCceEeccCCC--CHHHHHHHHHHHHHHh
Q 046280           45 VRRRPWG--RYAAEIRDPATKERHWLGTFD--TAEDAALAYDRAARSM   88 (266)
Q Consensus        45 V~~r~~G--KW~A~I~~~~~~kri~LGtF~--T~EEAA~AYD~Aa~~~   88 (266)
                      |+..+.|  .|+-+.+...+.+++-||.|.  |.++|....+.+...+
T Consensus        28 L~V~psG~K~w~~rYr~~GK~~~~~LG~yp~~SLa~AR~~a~~~r~~l   75 (108)
T 3ju0_A           28 LLVHPNGSKYWRLSYRFEKKQRLLALGVYPAVSLADARQRRDEAKKLL   75 (108)
T ss_dssp             EEECTTSCEEEEEEEEETTEEEEEEEEEETTSCHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCEEEEEEEEEcCceEEEecCCCCCCCHHHHHHHHHHHHHHH
Confidence            4455555  498888863333568899997  4788887777666655


No 7  
>2ftc_I Mitochondrial ribosomal protein L16, 39S ribosomal protein L13, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_I
Probab=39.96  E-value=36  Score=27.08  Aligned_cols=36  Identities=14%  Similarity=0.087  Sum_probs=29.3

Q ss_pred             EEEEEecCCCCceEeccCCCCHHHHHHHHHHHHHHhcC
Q 046280           53 YAAEIRDPATKERHWLGTFDTAEDAALAYDRAARSMRG   90 (266)
Q Consensus        53 W~A~I~~~~~~kri~LGtF~T~EEAA~AYD~Aa~~~~G   90 (266)
                      |+|+|..  +..-+-++...+++.|..|..+|+.+|-+
T Consensus        80 wva~Vk~--G~ilfEi~g~~~~~~a~eAlr~a~~KlP~  115 (118)
T 2ftc_I           80 YVTPVKA--GRLVVEMGGRCEFEEVQGFLDQVAHKLPF  115 (118)
T ss_pred             EEEEECC--CCEEEEEeccCCHHHHHHHHHHHHhhCCC
Confidence            9999995  55666677668899999999999988743


No 8  
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=34.90  E-value=29  Score=24.74  Aligned_cols=23  Identities=22%  Similarity=0.286  Sum_probs=18.6

Q ss_pred             ceEeccCCCCHHHHHHHHHHHHH
Q 046280           64 ERHWLGTFDTAEDAALAYDRAAR   86 (266)
Q Consensus        64 kri~LGtF~T~EEAA~AYD~Aa~   86 (266)
                      -|+++|-|.+.++|..+-++...
T Consensus        46 yRV~vGpf~s~~~A~~~~~~L~~   68 (81)
T 1uta_A           46 NRVVIGPVKGKENADSTLNRLKM   68 (81)
T ss_dssp             EEEEESSCBTTTHHHHHHHHHHH
T ss_pred             EEEEECCcCCHHHHHHHHHHHHH
Confidence            47888999999999988766554


No 9  
>3r8s_M 50S ribosomal protein L16; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_K 1p86_K 1vs8_M 1vs6_M 2aw4_M 2awb_M 1vt2_M 2i2v_M 2j28_M 2i2t_M* 2qao_M* 2qba_M* 2qbc_M* 2qbe_M 2qbg_M 2qbi_M* 2qbk_M* 2qov_M 2qox_M 2qoz_M* ...
Probab=33.63  E-value=36  Score=27.85  Aligned_cols=35  Identities=23%  Similarity=0.052  Sum_probs=28.1

Q ss_pred             EEEEEecCCCCceEeccCCCCHHHHHHHHHHHHHHhcC
Q 046280           53 YAAEIRDPATKERHWLGTFDTAEDAALAYDRAARSMRG   90 (266)
Q Consensus        53 W~A~I~~~~~~kri~LGtF~T~EEAA~AYD~Aa~~~~G   90 (266)
                      |+|+|..  +..-+-++. .+++.|..|..+|+.+|-+
T Consensus        92 wva~Vk~--G~ilfEi~g-~~~~~A~eAlr~a~~KLP~  126 (136)
T 3r8s_M           92 WVALIQP--GKVLYEMDG-VPEELAREAFKLAAAKLPI  126 (136)
T ss_dssp             EEEEECT--TCEEEEEES-SCHHHHHHHHHHHHTTCSS
T ss_pred             EEEEECC--CCEEEEEeC-CCHHHHHHHHHHHHhcCCC
Confidence            9999995  566666766 4899999999999987643


No 10 
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=33.10  E-value=24  Score=24.84  Aligned_cols=23  Identities=22%  Similarity=0.333  Sum_probs=18.3

Q ss_pred             ceEeccCCCCHHHHHHHHHHHHH
Q 046280           64 ERHWLGTFDTAEDAALAYDRAAR   86 (266)
Q Consensus        64 kri~LGtF~T~EEAA~AYD~Aa~   86 (266)
                      -|+++|.|.+.++|..+-++...
T Consensus        46 yRV~vGpf~~~~~A~~~~~~L~~   68 (79)
T 1x60_A           46 YKVQIGAFSSKDNADTLAARAKN   68 (79)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHH
T ss_pred             EEEEECCcCCHHHHHHHHHHHHH
Confidence            47788999999999988766544


No 11 
>1b69_A Protein (integrase); integrase, DNA binding, transposition, complex, beta-sheet recognition; HET: DNA; NMR {Enterococcus faecalis} SCOP: d.10.1.1 PDB: 1tn9_A* 1bb8_A 2bb8_A
Probab=30.91  E-value=52  Score=24.12  Aligned_cols=29  Identities=28%  Similarity=0.297  Sum_probs=21.6

Q ss_pred             CCCceeeEEeCCCCcEEEEEecCCCCceEe
Q 046280           38 DEIRFLGVRRRPWGRYAAEIRDPATKERHW   67 (266)
Q Consensus        38 ~tS~yrGV~~r~~GKW~A~I~~~~~~kri~   67 (266)
                      +.--+.|++.|+.|+|+.++.+. .|++.+
T Consensus         8 gr~L~~GesqR~dG~Y~yry~d~-~Gkr~~   36 (69)
T 1b69_A            8 GRILKTGESQRKDGRYLYKYIDS-FGEPQF   36 (69)
T ss_dssp             SSCCCTTEEECSSSCEEEEEECT-TSSEEE
T ss_pred             CCccCCCeEEccCCcEEEEEEcC-CCCEEE
Confidence            34567889999899999999983 355543


No 12 
>1ffk_F Ribosomal protein L10E; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: d.41.4.1 PDB: 1jj2_H 1k73_J* 1k8a_J* 1k9m_J* 1kc8_J* 1kd1_J* 1kqs_H* 1m1k_J* 1m90_J* 1n8r_J* 1nji_J* 1q7y_J* 1q81_J* 1q82_J* 1q86_J* 1qvf_H 1qvg_H 1w2b_H 3cxc_H* 1giy_P ...
Probab=30.08  E-value=56  Score=27.45  Aligned_cols=44  Identities=18%  Similarity=0.286  Sum_probs=30.4

Q ss_pred             eEEeCC-CCc---EEEEEecCCCCceEeccCCCCHHHHHHHHHHHHHHhcC
Q 046280           44 GVRRRP-WGR---YAAEIRDPATKERHWLGTFDTAEDAALAYDRAARSMRG   90 (266)
Q Consensus        44 GV~~r~-~GK---W~A~I~~~~~~kri~LGtF~T~EEAA~AYD~Aa~~~~G   90 (266)
                      .++.++ .|+   |+|+|.   -|+-++--.-..++.|..|..+|+.+|-+
T Consensus        98 etrMg~gkG~p~~wvArVk---~G~ilfei~gv~~~~A~eAlr~A~~KlP~  145 (157)
T 1ffk_F           98 GDGMRAPFGKSVGTAARSH---GANHDFIAWVNPDPAVEFAWRRAYMKVTP  145 (157)
T ss_pred             cccccCCCCCccEEEEEEc---CCCEEEEEeccCHHHHHHHHHHHHhhCCC
Confidence            455443 454   999998   45555444446788999999999988754


No 13 
>1vq8_H 50S ribosomal protein L10E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.41.4.1 PDB: 1vq4_H* 1vq5_H* 1vq6_H* 1vq7_H* 1s72_H* 1vq9_H* 1vqk_H* 1vql_H* 1vqm_H* 1vqn_H* 1vqo_H* 1vqp_H* 2otj_H* 2otl_H* 2qa4_H* 2qex_H* 1yhq_H* 1yi2_H* 1yij_H* 1yit_H* ...
Probab=29.25  E-value=36  Score=29.09  Aligned_cols=35  Identities=23%  Similarity=0.258  Sum_probs=26.1

Q ss_pred             EEEEEecCCCCceEe-ccC-CCCHHHHHHHHHHHHHHhcC
Q 046280           53 YAAEIRDPATKERHW-LGT-FDTAEDAALAYDRAARSMRG   90 (266)
Q Consensus        53 W~A~I~~~~~~kri~-LGt-F~T~EEAA~AYD~Aa~~~~G   90 (266)
                      |+|+|..   |+.++ +.. -.+++.|..|..+|+.+|-+
T Consensus       123 wvArVk~---G~ilfei~~~~v~~~~A~eAlr~A~~KLP~  159 (171)
T 1vq8_H          123 TAARVQA---GEQLFTAYCNVEDAEHVKEAFRRAYNKITP  159 (171)
T ss_dssp             EEEEECT---TCEEEEEEECTTTHHHHHHHHHHHGGGSSS
T ss_pred             EEEEECC---CCEEEEEECcCCCHHHHHHHHHHHHhhCCC
Confidence            9999984   54443 332 37899999999999988754


No 14 
>2pa2_A 60S ribosomal protein L10; QM protein, , structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Homo sapiens} SCOP: d.41.4.1
Probab=23.04  E-value=37  Score=28.40  Aligned_cols=35  Identities=20%  Similarity=0.143  Sum_probs=26.0

Q ss_pred             EEEEEecCCCCceE-eccC-CCCHHHHHHHHHHHHHHhcC
Q 046280           53 YAAEIRDPATKERH-WLGT-FDTAEDAALAYDRAARSMRG   90 (266)
Q Consensus        53 W~A~I~~~~~~kri-~LGt-F~T~EEAA~AYD~Aa~~~~G   90 (266)
                      |+|+|..   |+-+ -+.. -..++.|..|..+|+.+|-+
T Consensus        94 wvArVk~---G~ilfei~~~~v~~~~A~eAlr~A~~KlP~  130 (151)
T 2pa2_A           94 TVARVHI---GQVIMSIRTKLQNKEHVIEALRRAKFKFPG  130 (151)
T ss_dssp             CEEEECT---TBEEEEEEECGGGHHHHHHHHHHHGGGSSS
T ss_pred             EEEEECC---CCEEEEEECCCCCHHHHHHHHHHHHhhCCC
Confidence            9999984   5444 3433 36899999999999998743


No 15 
>2zkr_h 60S ribosomal protein L10; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=21.20  E-value=63  Score=28.52  Aligned_cols=36  Identities=19%  Similarity=0.132  Sum_probs=26.8

Q ss_pred             EEEEEecCCCCceEeccC-CCCHHHHHHHHHHHHHHhcC
Q 046280           53 YAAEIRDPATKERHWLGT-FDTAEDAALAYDRAARSMRG   90 (266)
Q Consensus        53 W~A~I~~~~~~kri~LGt-F~T~EEAA~AYD~Aa~~~~G   90 (266)
                      |+|+|..  +..-+-+.. -.+++.|..|..+|+.+|-+
T Consensus       125 wvArVkp--GqilfEi~~~~v~~~~A~eALr~A~~KLP~  161 (214)
T 2zkr_h          125 TVAKVHI--GQVIMSIRTKLQNKEHVIEALRRAKFKFPG  161 (214)
T ss_dssp             EEEEECT--TCEEEEEEECSTTHHHHHHHHHHHHHTSSS
T ss_pred             EEEEECC--CCEEEEEeCCCCCHHHHHHHHHHHHhhCCC
Confidence            9999994  433344433 37899999999999999843


No 16 
>2bn8_A CEDA, cell division activator CEDA; cell division activator protein, cell cycle protein; NMR {Escherichia coli} PDB: 2d35_A
Probab=20.66  E-value=49  Score=24.92  Aligned_cols=41  Identities=20%  Similarity=0.052  Sum_probs=28.4

Q ss_pred             CCCceeeEEeCCCCcEEEEEecCCCCceEeccCCCCHHHHHHHH
Q 046280           38 DEIRFLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAEDAALAY   81 (266)
Q Consensus        38 ~tS~yrGV~~r~~GKW~A~I~~~~~~kri~LGtF~T~EEAA~AY   81 (266)
                      +--+||-|..-+ |||+|.+..  +-.-..--.|..+|.|-|.-
T Consensus        36 kmd~frdvw~lr-gkyvafvl~--ge~frrspafsvpesaqrwa   76 (87)
T 2bn8_A           36 KMDSFRDVWMLR-GKYVAFVLM--GESFLRSPAFTVPESAQRWA   76 (87)
T ss_dssp             CTTTCTTEEEET-TEEEEBCCS--SSCCCBCCCBSSHHHHHHHH
T ss_pred             hcccchhheeec-cceEEEEEe--chhhccCCccCCcHHHHHHH
Confidence            345788886555 999999986  33333346788888887753


Done!