Query 046281
Match_columns 133
No_of_seqs 132 out of 1036
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 18:17:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046281.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046281hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1f7s_A Actin depolymerizing fa 100.0 5.2E-46 1.8E-50 255.6 15.1 133 1-133 1-133 (139)
2 2i2q_A Cofilin; N-terminal ser 100.0 9.2E-45 3.2E-49 248.7 14.7 128 3-132 1-128 (137)
3 1cfy_A Cofilin; actin-binding, 100.0 2.4E-44 8.3E-49 248.2 13.3 129 3-132 1-130 (143)
4 2xfa_A Actin depolymerization 100.0 1.9E-44 6.6E-49 250.1 11.1 128 3-132 5-138 (148)
5 2kvk_A Actin severing and dyna 100.0 1.4E-43 4.9E-48 244.8 14.1 127 3-132 1-127 (144)
6 1vkk_A GMF-gamma, GLIA maturat 100.0 4E-43 1.4E-47 245.0 13.3 130 1-132 13-144 (154)
7 1cnu_A Actophorin, ADF, cofili 100.0 7E-43 2.4E-47 239.2 14.3 126 6-132 1-126 (137)
8 2kd5_A ADF H, actin severing a 100.0 7E-43 2.4E-47 241.3 13.2 126 4-132 2-127 (144)
9 2lj8_A Cofilin/actin depolymer 100.0 1.7E-42 5.9E-47 239.4 14.4 127 2-132 8-134 (144)
10 1tvj_A Cofilin; ADF, actin bin 100.0 3E-42 1E-46 243.2 14.3 128 4-132 1-147 (166)
11 1m4j_A A6 gene product, twinfi 100.0 6.5E-42 2.2E-46 235.9 9.3 125 1-132 1-132 (142)
12 1ak6_A Destrin; actin depolyme 100.0 1.7E-42 5.7E-47 246.2 6.2 130 2-132 8-155 (174)
13 2vac_A Twinfilin-2; transferas 100.0 3.5E-41 1.2E-45 230.2 10.2 122 5-132 1-129 (134)
14 1v6f_A MGMF-beta, GLIA maturat 100.0 4.9E-40 1.7E-44 228.7 14.5 124 7-132 13-138 (151)
15 3q2b_A Pfadf1, cofilin/actin-d 100.0 1.4E-41 4.8E-46 229.5 6.4 118 2-131 1-122 (124)
16 2l72_A Tgadf, actin depolymeri 100.0 2.4E-40 8.3E-45 227.3 12.6 117 4-133 22-139 (139)
17 2w0i_A Twinfilin-2; cytoskelet 100.0 9.2E-40 3.2E-44 223.5 12.3 121 8-132 2-128 (135)
18 2d8b_A Twinfilin-1; cell-free 100.0 2.4E-39 8.2E-44 228.4 12.3 125 4-132 21-153 (166)
19 1hqz_1 ABP1P, actin-binding pr 100.0 1.1E-38 3.7E-43 219.5 12.7 122 4-132 2-129 (141)
20 3daw_B Twinfilin-1, protein A6 100.0 4.5E-38 1.5E-42 221.3 13.6 125 4-132 16-148 (164)
21 1x67_A Drebrin-like protein; c 100.0 1.3E-36 4.5E-41 210.3 12.9 124 4-132 4-133 (146)
22 1t3y_A Coactosin-like protein; 100.0 7.9E-33 2.7E-37 190.3 11.2 116 11-132 6-122 (141)
23 2raq_A Conserved protein MTH88 58.9 29 0.001 21.5 5.3 56 13-69 23-78 (97)
24 3cip_G Gelsolin; actin, dictyo 58.8 34 0.0012 22.1 7.5 95 16-126 9-106 (128)
25 2ff3_A Gelsolin; protein-prote 54.8 44 0.0015 22.2 7.5 86 16-117 28-113 (150)
26 2vik_A Villin 14T; actin-bindi 53.9 41 0.0014 21.6 5.9 57 65-125 43-102 (126)
27 1t44_G Chimera of gelsolin dom 51.0 51 0.0017 21.8 7.5 86 16-117 6-91 (147)
28 3tu5_B Gelsolin, protein cordo 47.4 68 0.0023 23.8 6.8 95 16-126 24-121 (297)
29 2p2e_A Putative Fe-S biosynthe 45.3 25 0.00087 22.6 3.7 28 7-35 4-31 (128)
30 2ay0_A Bifunctional PUTA prote 45.0 7.8 0.00027 21.5 1.0 24 1-24 1-24 (58)
31 2x3d_A SSO6206; unknown functi 42.3 31 0.0011 21.3 3.5 57 13-70 22-78 (96)
32 3bpd_A Uncharacterized protein 39.3 18 0.00061 22.6 2.1 55 13-68 23-77 (100)
33 2ygw_A Malonyl-COA decarboxyla 31.6 25 0.00087 27.9 2.3 35 50-90 191-225 (460)
34 2k5j_A Uncharacterized protein 28.8 26 0.00088 20.6 1.5 21 3-23 9-29 (80)
35 2gpe_A Bifunctional protein PU 28.8 13 0.00046 19.6 0.2 23 1-23 1-23 (52)
36 3vbh_A EV71, genome polyprotei 28.7 81 0.0028 23.5 4.5 45 53-99 116-164 (297)
37 1ncq_A Coat protein VP1; HRV, 27.1 88 0.003 23.1 4.5 16 84-99 146-161 (289)
38 3gqq_A Protein UNC-119 homolog 25.5 1.3E+02 0.0044 21.0 4.8 49 26-74 40-90 (195)
39 1tme_1 Theiler'S murine enceph 25.4 78 0.0027 23.3 3.9 33 66-98 121-153 (274)
40 4goj_C Protein UNC-119 homolog 25.1 1.1E+02 0.0037 22.0 4.4 48 26-73 85-134 (240)
41 1fmd_1 Foot-and-mouth disease 23.7 64 0.0022 22.7 3.1 29 65-99 69-97 (208)
42 1z7s_1 Human coxsackievirus A2 22.9 1.2E+02 0.0039 22.6 4.5 15 85-99 149-163 (298)
43 3fxt_A Nucleoside diphosphate- 22.8 64 0.0022 20.5 2.7 14 82-95 99-112 (113)
44 4a8x_B HOOK-like, isoform A; t 21.4 22 0.00076 18.3 0.2 8 87-94 22-29 (40)
45 2mev_1 Mengo virus coat protei 20.9 88 0.003 23.0 3.4 33 66-98 121-153 (277)
No 1
>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2
Probab=100.00 E-value=5.2e-46 Score=255.56 Aligned_cols=133 Identities=75% Similarity=1.266 Sum_probs=118.9
Q ss_pred CCCCCcCCccCHHHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCC
Q 046281 1 MANSSSGMAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENC 80 (133)
Q Consensus 1 ~~~~~SGi~is~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~ 80 (133)
|+||+|||.++++|+++|++|+.++.+|||+|+|+.++++|+|+++|+...+|++|.+.||+++|||++||+++++.+|+
T Consensus 1 ~~~~~sGi~v~~e~~~af~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~ 80 (139)
T 1f7s_A 1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENC 80 (139)
T ss_dssp ----CCCCEECHHHHHHHHHHHHHCCCSEEEEEEETTTTEEEEEEECCSSCCHHHHHTTSCTTSCEEEEEEEEEECTTSC
T ss_pred CCcCccCcEeCHHHHHHHHHHHcCCCcEEEEEEECCCCcEEEEEeecCCCCCHHHHHHhCCCCCceEEEEEeeeeccccC
Confidence 78899999999999999999998767899999999988899999988666699999999999999999999999999999
Q ss_pred ccccEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeEEEEeCCCCCCccCC
Q 046281 81 QKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPSEMSLDI 133 (133)
Q Consensus 81 ~~~~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~~i~~~d~~dl~~~~ 133 (133)
.+++++||+|||++|++|.||+|||+|++|++.|+|++++|+|++++||+++.
T Consensus 81 ~~~k~vfI~w~P~~a~v~~KmlyAssk~~l~~~l~g~~v~i~a~d~~el~~~~ 133 (139)
T 1f7s_A 81 QKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDV 133 (139)
T ss_dssp EEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCCEEEEECCTTC-----
T ss_pred cccCEEEEEECCCCCChhHheehHHhHHHHHHhcCCeEEEEEECChHHCCHHH
Confidence 99999999999999999999999999999999999999999999999999863
No 2
>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.2e-45 Score=248.68 Aligned_cols=128 Identities=43% Similarity=0.821 Sum_probs=115.6
Q ss_pred CCCcCCccCHHHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCCcc
Q 046281 3 NSSSGMAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENCQK 82 (133)
Q Consensus 3 ~~~SGi~is~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~~ 82 (133)
||+|||+++++|.++|++|+.++.++||+|+|+.++++|+|++ +..+.+|++|.+.||+++|||++||+++++.+| .+
T Consensus 1 ~~~sGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~-~~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~-~~ 78 (137)
T 2i2q_A 1 MSFSGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEK-KSTDKDFDTFLGDLPEKDCRYAIYDFEFNLGEG-VR 78 (137)
T ss_dssp -CCSCCEECHHHHHHHHHHHHTCCCSEEEEEECTTSSEEEEEE-EECCCCHHHHHHTSCSSSCEEEEEEEEECSSSS-CE
T ss_pred CCCCCcccCHHHHHHHHHHHCCCCceEEEEEECCCCcEEEEec-CCCCCCHHHHHHhCCCcCceEEEEEeeeecCCC-Cc
Confidence 5789999999999999999998779999999998888999987 445689999999999999999999999998877 89
Q ss_pred ccEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeEEEEeCCCCCCccC
Q 046281 83 SKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPSEMSLD 132 (133)
Q Consensus 83 ~~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~~i~~~d~~dl~~~ 132 (133)
++++||+|||++|++|+||+|||+|++|++.|+|++++||+++++||+++
T Consensus 79 ~k~vfI~w~Pd~a~vk~KMlyassk~~l~~~l~g~~~~i~a~d~~el~~~ 128 (137)
T 2i2q_A 79 NKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGTDIQATDFSEVAYE 128 (137)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCCCCCEEEEECCCC-----
T ss_pred cCEEEEEECCCCCChhHhhhhHHHHHHHHHHhcCceEEEEECChHHcCHH
Confidence 99999999999999999999999999999999999999999999999876
No 3
>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A
Probab=100.00 E-value=2.4e-44 Score=248.18 Aligned_cols=129 Identities=45% Similarity=0.808 Sum_probs=118.0
Q ss_pred CCCcCCccCHHHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCC-Cc
Q 046281 3 NSSSGMAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDEN-CQ 81 (133)
Q Consensus 3 ~~~SGi~is~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~-~~ 81 (133)
||+|||.++++|+++|++|+.++.++||+|+|+.++++|+|+++++ +.+|++|.+.||+++|||++||+++++.+| +.
T Consensus 1 ~~~sGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~-~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~ 79 (143)
T 1cfy_A 1 MSRSGVAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKETST-DPSYDAFLEKLPENDCLYAIYDFEYEINGNEGK 79 (143)
T ss_dssp -----CEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEEEC-CCCHHHHHTTSCTTCCEEEEEEEEEECSSSCCE
T ss_pred CCcCCcEeCHHHHHHHHHHHCCCCeeEEEEEEcCCCCEEEEEecCC-CCCHHHHHHhCCCCCcEEEEEEeeeecCCCccc
Confidence 4789999999999999999998779999999998888999998875 679999999999999999999999998888 88
Q ss_pred cccEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeEEEEeCCCCCCccC
Q 046281 82 KSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPSEMSLD 132 (133)
Q Consensus 82 ~~~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~~i~~~d~~dl~~~ 132 (133)
+++++||+|||++||+|+||+|||+|++|++.|+|++++|++++++||+++
T Consensus 80 ~~k~vfI~w~Pd~a~v~~KmlyAssk~~l~~~l~g~~~~i~a~d~~el~~~ 130 (143)
T 1cfy_A 80 RSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVSTDVQGTDFSEVSYD 130 (143)
T ss_dssp EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTCCEEEEESSGGGGSHH
T ss_pred ccCEEEEEECCCCCChhheeehHhhHHHHHHhcCCceEEEEeCChHHCCHH
Confidence 999999999999999999999999999999999999999999999999875
No 4
>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.9e-44 Score=250.08 Aligned_cols=128 Identities=32% Similarity=0.615 Sum_probs=118.3
Q ss_pred CCCcCCccCHHHHHHHHHhhcCCCceEEEEEEeCCceEEEEe------ecCCCCCChHHHHhcCCCCCceeEEEeeeeec
Q 046281 3 NSSSGMAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVE------KLGEPNESYEDFTASLPADECRYAVYDFDFTT 76 (133)
Q Consensus 3 ~~~SGi~is~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~------~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~ 76 (133)
.|+|||.++++|+++|++|+.++.+|||+|+| .++++|+++ ++++.+.+|++|.+.||+++|||++||+++++
T Consensus 5 sm~sGi~v~~e~~~af~~~k~~k~~~~ii~~i-~~~~~i~v~~~~~~~~~g~~~~~~~~~~~~L~~~~prY~~y~~~~~~ 83 (148)
T 2xfa_A 5 SMVSGVNVSDECIYEFNRLKVKHLNKYIIYKI-ENLEKIVVDVLEHDMELTSLDNIIMRIKNNLKNTECRYIIADMPIPT 83 (148)
T ss_dssp -CCCCCEECHHHHHHHHHHHTSCCCSEEEEEE-ETTTEEEEEEEECCTTCCCHHHHHHHHHHTCBTTBCEEEEEEEEECC
T ss_pred cccCCCeeCHHHHHHHHHHHCCCceEEEEEEE-CCCCEEEEEecccccccCCCCCCHHHHHHhCCcCCcEEEEEeccccc
Confidence 47899999999999999999987799999999 556789988 55543468999999999999999999999999
Q ss_pred CCCCccccEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeEEEEeCCCCCCccC
Q 046281 77 DENCQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPSEMSLD 132 (133)
Q Consensus 77 ~~~~~~~~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~~i~~~d~~dl~~~ 132 (133)
.+|+.+++|+||+|||++|++|+||+|||+|++|++.|+|++++|||++ +||+++
T Consensus 84 ~~g~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~i~atd-~el~~~ 138 (148)
T 2xfa_A 84 PEGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIFKSLEITC-DINEFE 138 (148)
T ss_dssp SSCCCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCSEEEEECS-CGGGHH
T ss_pred CCCCcccCEEEEEECCCCCChHHHhHhHHHHHHHHHHhcCCeEEEEEEc-ccCCHH
Confidence 9999999999999999999999999999999999999999999999999 999875
No 5
>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}
Probab=100.00 E-value=1.4e-43 Score=244.82 Aligned_cols=127 Identities=24% Similarity=0.553 Sum_probs=118.0
Q ss_pred CCCcCCccCHHHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCCcc
Q 046281 3 NSSSGMAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENCQK 82 (133)
Q Consensus 3 ~~~SGi~is~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~~ 82 (133)
|++|||.++++|+++|++|+.++ .|||+|+|+.++++|+|+.+++.+.+|++|.+.||+++|||++|||++++. ++.+
T Consensus 1 Ma~SGv~v~de~~~af~~lk~~k-~~~vi~~I~~~~~~i~v~~~~~~~~~~~e~~~~L~~~~prY~~y~~~~~~~-~~~~ 78 (144)
T 2kvk_A 1 MAISGVTLEESVRGAIDDLRMKK-SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDA-GSKR 78 (144)
T ss_dssp CCCCCCEECHHHHHHHHHHHTTS-SSEEEEEECTTSCEEEEEEEECTTCCHHHHHHTCCTTSCCEEEEEEEEEET-TEEE
T ss_pred CCcCCcccCHHHHHHHHHHhcCC-ceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhCCccCceEEEEEeeeccC-CCCc
Confidence 58899999999999999999875 799999999998999999888778899999999999999999999999765 4578
Q ss_pred ccEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeEEEEeCCCCCCccC
Q 046281 83 SKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPSEMSLD 132 (133)
Q Consensus 83 ~~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~~i~~~d~~dl~~~ 132 (133)
++++||+|||++||+|+||+|||+|++|++.|+| +++|||+|++||+++
T Consensus 79 ~k~vfI~w~Pd~a~vk~KMlyassk~~lk~~l~~-~~~i~a~d~~el~~e 127 (144)
T 2kvk_A 79 EKLILIQWIPDTARPREKMMYSASRDALSSVSEG-YLPIQANDESGLDAE 127 (144)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTT-EEEEEESSGGGGCHH
T ss_pred ccEEEEEECCCCCCHHHHHHHHHHHHHHHHhcCC-EEEEEECChHHCCHH
Confidence 9999999999999999999999999999999977 579999999999875
No 6
>1vkk_A GMF-gamma, GLIA maturation factor gamma; 15079298, structural GEN JCSG, protein structure initiative, PSI, joint center for S genomics; 1.35A {Mus musculus} SCOP: d.109.1.2 PDB: 1wfs_A 3l50_A
Probab=100.00 E-value=4e-43 Score=245.01 Aligned_cols=130 Identities=22% Similarity=0.353 Sum_probs=118.0
Q ss_pred CCCCCcCCccCHHHHHHHHHhhcCC--CceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCC
Q 046281 1 MANSSSGMAVHDECKLKFLELKAKR--SYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDE 78 (133)
Q Consensus 1 ~~~~~SGi~is~e~~~a~~~l~~~~--~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~ 78 (133)
|+.+.||++++++|+++|++|+.++ ..+||+|+|+.++++|+|+++++ +.+|++|.+.||+++|||++|||++++.+
T Consensus 13 ~~~~~~~~~v~~e~~~a~~~lk~~k~~~~~~iifkId~~~~~I~v~~~~~-~~~~~e~~~~Lp~~~pRY~vy~~~~~~~~ 91 (154)
T 1vkk_A 13 MSDSLVVCEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQ-NISPEELKLELPERQPRFVVYSYKYVHDD 91 (154)
T ss_dssp -----CCCEECHHHHHHHHHHHTCCCCSCEEEEEEEETTTTEEEEEEEEE-SCCHHHHHHHSCSSSCEEEEEECCEECTT
T ss_pred ccccccceeeCHHHHHHHHHHHhcccCCccEEEEEEcCCCCEEEEEEcCC-CCCHHHHHHhCCCCCcEEEEEEeeeccCC
Confidence 5668899999999999999999875 58999999999888999988654 67899999999999999999999999998
Q ss_pred CCccccEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeEEEEeCCCCCCccC
Q 046281 79 NCQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPSEMSLD 132 (133)
Q Consensus 79 ~~~~~~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~~i~~~d~~dl~~~ 132 (133)
|+.+++++||+|||++|++|+||+|||+|++|++.| |++++|||+|++||+++
T Consensus 92 g~~~~klvFI~w~P~~a~vk~KMlYAssk~~l~~~l-gi~~~iea~d~~El~~e 144 (154)
T 1vkk_A 92 GRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTA-ELTKVFEIRTTDDLTET 144 (154)
T ss_dssp SCEECCEEEEEECCTTSCHHHHHHHHHHHHHHHHHT-TCCCEEEESSGGGCCHH
T ss_pred CcccccEEEEEECCCCCChhhhhhhHhhHHHHHHhh-CceEEEEECChHhCCHH
Confidence 888999999999999999999999999999999999 89999999999999875
No 7
>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A
Probab=100.00 E-value=7e-43 Score=239.25 Aligned_cols=126 Identities=48% Similarity=0.907 Sum_probs=118.8
Q ss_pred cCCccCHHHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCCccccE
Q 046281 6 SGMAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENCQKSKI 85 (133)
Q Consensus 6 SGi~is~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~~~~~ 85 (133)
|||+++++|.++|++|+.++.++||+|+|+.++++|+++++|+.+.+|++|.+.||+++|||++||+++++.+| .++++
T Consensus 1 SGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~-~~~k~ 79 (137)
T 1cnu_A 1 SGIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQVDGG-QRNKI 79 (137)
T ss_dssp -CCEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEECCTTCCHHHHHTTSCTTSCEEEEEEEEEEETTE-EEEEE
T ss_pred CCCccCHHHHHHHHHHHcCCCccEEEEEEcCCCCEEEEEeccCCCCCHHHHHHhCCCCCceEEEEEeeeecCCC-CccCE
Confidence 79999999999999999986789999999988889999998866789999999999999999999999998877 88999
Q ss_pred EEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeEEEEeCCCCCCccC
Q 046281 86 FFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPSEMSLD 132 (133)
Q Consensus 86 vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~~i~~~d~~dl~~~ 132 (133)
+||+|||++|++|+||+|||+|++|++.|+|++++|+|++++||+++
T Consensus 80 vfI~w~Pd~a~v~~Kmlyassk~~l~~~l~g~~~~i~a~~~~el~~~ 126 (137)
T 1cnu_A 80 TFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATDAAEISED 126 (137)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHHHSTTCCEEEEECSTTTTSHH
T ss_pred EEEEECCCCCChHHheehHHhHHHHHHHhcCceEEEEECChHHCCHH
Confidence 99999999999999999999999999999999999999999999875
No 8
>2kd5_A ADF H, actin severing and dynamics regulatory protein; cofilin, solution structure, hormone; NMR {Leishmania donovani} PDB: 2kvk_A
Probab=100.00 E-value=7e-43 Score=241.33 Aligned_cols=126 Identities=25% Similarity=0.562 Sum_probs=118.5
Q ss_pred CCcCCccCHHHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCCccc
Q 046281 4 SSSGMAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENCQKS 83 (133)
Q Consensus 4 ~~SGi~is~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~~~ 83 (133)
++|||.++++|+++|++|+.++ ++||+|+|+.++++|+|+++|..+.+|++|.+.||+++|||++||+++++.+ +.++
T Consensus 2 s~SGi~vs~e~~~a~~~~~~~~-~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~-~~~~ 79 (144)
T 2kd5_A 2 AISGVTLEESVRGAIDDLRMKK-SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDAG-SKRE 79 (144)
T ss_dssp CCCSCBCCHHHHHHHHHHTTTS-SSEEEEEECSSSCBEEEEEECCSCCCHHHHTTTTSCSSCEEEEEEEEEESSS-CEEE
T ss_pred CccCCCcCHHHHHHHHHHHcCC-eeEEEEEECCCCCEEEEEeccCCCCCHHHHHHhCCccCcEEEEEEEEecCCC-CCcc
Confidence 3499999999999999999987 9999999998888999999877678999999999999999999999998876 5689
Q ss_pred cEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeEEEEeCCCCCCccC
Q 046281 84 KIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPSEMSLD 132 (133)
Q Consensus 84 ~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~~i~~~d~~dl~~~ 132 (133)
+++||+|||++||+|+||+|||+|++|++.|+|+ ++|++++++||+++
T Consensus 80 k~vfI~w~Pd~a~vk~KMlyAssk~~l~~~l~g~-~~i~a~d~~el~~~ 127 (144)
T 2kd5_A 80 KLILIQWIPDTARPREKMMYSASRDALSSVSEGY-LPIQANDESGLDAE 127 (144)
T ss_dssp EEEEEEECCCCSCSHHHHHHHHHGGGGTTTTCCS-EEEEESSSSSSSHH
T ss_pred CEEEEEECCCCCCHHHHhhhHHHHHHHHHHhCCe-EEEEECChHHCCHH
Confidence 9999999999999999999999999999999999 99999999999875
No 9
>2lj8_A Cofilin/actin depolymerizing factor, putative; protein binding; NMR {Trypanosoma brucei}
Probab=100.00 E-value=1.7e-42 Score=239.40 Aligned_cols=127 Identities=30% Similarity=0.653 Sum_probs=114.4
Q ss_pred CCCCcCCccCHHHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCCc
Q 046281 2 ANSSSGMAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENCQ 81 (133)
Q Consensus 2 ~~~~SGi~is~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~ 81 (133)
+|++|||++++||+++|++|+.++ .+|++|+|++++ +++++..+..+.+|++|++.||+++|||++|+|.+.+.++ .
T Consensus 8 ~Ma~SGi~vsde~~~af~~lk~~k-~~~ii~~i~d~~-~~vv~~~~~~~~~~de~~~~L~~~~prY~~y~~~~~~~~~-~ 84 (144)
T 2lj8_A 8 HMAMSGVSVADECVTALNDLRHKK-SRYVIMHIVDQK-SIAVKTIGERGANFDQFIEAIDKNVPCYAAFDFEYTTNDG-P 84 (144)
T ss_dssp -CCCSSCEECHHHHHHHHHHTTTS-SSEEEEEEETTT-EEEEEEECSSCCCHHHHHHHCCSSSCEEEEEEEEECSSSS-S
T ss_pred ccccCCceeCHHHHHHHHHHhcCC-ceEEEEEEECCc-EEEEEecCCCCCCHHHHHHhCcccCCcceeeeeeeccCCC-C
Confidence 367899999999999999999876 799999998775 4666666667889999999999999999999999987665 5
Q ss_pred cccEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeEEEEeCCCCCCccC
Q 046281 82 KSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPSEMSLD 132 (133)
Q Consensus 82 ~~~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~~i~~~d~~dl~~~ 132 (133)
+++||||+|||++||+|+||+|||+|++|++.|+|++ +|||+|++||+++
T Consensus 85 ~~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~~~~-~i~a~d~~el~~e 134 (144)
T 2lj8_A 85 RDKLILISWNPDSGAPRTKMLYSSSRDALVPLTQGFQ-GIQANDASGLDFE 134 (144)
T ss_dssp EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTTTSE-EEECCGGGTSCHH
T ss_pred cccEEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCee-EEEeCChHHCCHH
Confidence 7899999999999999999999999999999998876 8999999999875
No 10
>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}
Probab=100.00 E-value=3e-42 Score=243.21 Aligned_cols=128 Identities=31% Similarity=0.695 Sum_probs=117.4
Q ss_pred CCcCCccCHHHHHHHHHhhcCC---------CceEEEEEEeCCceEEEEee--------cCCC-CCChHHHHhcCCCCCc
Q 046281 4 SSSGMAVHDECKLKFLELKAKR---------SYRFIVFKIEEKIQQVTVEK--------LGEP-NESYEDFTASLPADEC 65 (133)
Q Consensus 4 ~~SGi~is~e~~~a~~~l~~~~---------~~~~vi~~i~~~~~~i~v~~--------~~~~-~~~~~~~~~~l~~~~p 65 (133)
|+|||.++++|+++|++|+.++ .+|||+|+|++++..|++++ .++. +.+|++|++.||+++|
T Consensus 1 m~SGi~vs~e~~~~f~~~k~~k~~~~~~~~~~~~~iifki~~~~~~iivee~~~~~~~~~~~~~~~~~~ef~~~L~~~~p 80 (166)
T 1tvj_A 1 MASGVTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDIGDTVEDPYTAFVKLLPLNDC 80 (166)
T ss_dssp CCCCCEECHHHHHHHHHHHSCCCSCHHHHTTCEEEEEEEECTTSSEEEEEEEEEEETTTBTTTBSCHHHHHHHHCCTTSC
T ss_pred CCCCCeeCHHHHHHHHHHhcCCCccccccccceeEEEEEECCCCcEEEEeccccccccccCccccCCHHHHHHhCCCCCc
Confidence 5799999999999999999876 48999999999878898886 3432 5789999999999999
Q ss_pred eeEEEeeeeecCCCCccccEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeEEEEeCCCCCC-ccC
Q 046281 66 RYAVYDFDFTTDENCQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPSEM-SLD 132 (133)
Q Consensus 66 ry~~y~~~~~~~~~~~~~~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~~i~~~d~~dl-~~~ 132 (133)
||++||++|++.+| .+++|+||+|||++|++|+||+|||+|++|++.|+|++++|||++++|| +++
T Consensus 81 rY~vy~~~~~~~~~-~~~klvfI~W~Pd~a~vr~KMlYAssk~~lk~~l~gi~~~i~atd~~el~~~~ 147 (166)
T 1tvj_A 81 RYALYDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKHEWQVNGLDDIKDRS 147 (166)
T ss_dssp EEEEEEEEEEESSC-EEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCCCEEEESSGGGTCCHH
T ss_pred EEEEEeccccCCCC-CccCEEEEEECCCCCCHHHhhHHHHhHHHHHHHhcCCeEEEEECChHHcCCHH
Confidence 99999999988876 8999999999999999999999999999999999999999999999999 754
No 11
>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2
Probab=100.00 E-value=6.5e-42 Score=235.93 Aligned_cols=125 Identities=28% Similarity=0.586 Sum_probs=108.0
Q ss_pred CCCCCcCCccCHHHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCC----ChHHHHhcC-CCCCceeEEEeeeee
Q 046281 1 MANSSSGMAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNE----SYEDFTASL-PADECRYAVYDFDFT 75 (133)
Q Consensus 1 ~~~~~SGi~is~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~----~~~~~~~~l-~~~~pry~~y~~~~~ 75 (133)
|+ |+|||.++++|+++|++|+.++ +|||+|+|+++ +|+|+++++... +|++|++.| |+++|||++||+++.
T Consensus 1 Ms-m~SGi~v~~e~~~~f~~~k~~k-~~~ii~~i~~~--~ivv~~~~~~~~~~~~~~~e~~~~l~~~~~~rY~~~~~~~~ 76 (142)
T 1m4j_A 1 MS-HQTGIQASEDVKEIFARARNGK-YRLLKISIENE--QLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDSQ 76 (142)
T ss_dssp -------CCBCHHHHHHHHHHHTTT-CSEEEEEECSS--SEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEE
T ss_pred CC-CcCCCeECHHHHHHHHHHhcCC-eEEEEEEEcCC--EEEEEeecCCCccccccHHHHHHhhCCCCCceEEEEEcCcC
Confidence 54 7899999999999999999987 99999999774 788888776543 478999888 799999999999998
Q ss_pred cCCCCccccEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeE--EEEeCCCCCCccC
Q 046281 76 TDENCQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQV--ELQATDPSEMSLD 132 (133)
Q Consensus 76 ~~~~~~~~~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~--~i~~~d~~dl~~~ 132 (133)
+.+ +++|+||+|||++||+|+||+|||||++|++.|+|+++ +|||++++||+++
T Consensus 77 ~~~---~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~~~i~atd~~el~~~ 132 (142)
T 1m4j_A 77 NAQ---GYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHIKDEVFGTVKEDVSLH 132 (142)
T ss_dssp ETT---EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGEEEEEEESSHHHHSHH
T ss_pred CCC---CceEEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCceeEEEEEeCChHHCCHH
Confidence 764 59999999999999999999999999999999999877 9999999999875
No 12
>1ak6_A Destrin; actin depolymerization factor, actin-binding protein; NMR {Homo sapiens} SCOP: d.109.1.2 PDB: 1ak7_A 1q8g_A 1q8x_A 3j0s_M
Probab=100.00 E-value=1.7e-42 Score=246.16 Aligned_cols=130 Identities=33% Similarity=0.686 Sum_probs=117.9
Q ss_pred CCCCcCCccCHHHHHHHHHhhcCC---------CceEEEEEEeCCceEEEEeec--------CCC-CCChHHHHhcCCCC
Q 046281 2 ANSSSGMAVHDECKLKFLELKAKR---------SYRFIVFKIEEKIQQVTVEKL--------GEP-NESYEDFTASLPAD 63 (133)
Q Consensus 2 ~~~~SGi~is~e~~~a~~~l~~~~---------~~~~vi~~i~~~~~~i~v~~~--------~~~-~~~~~~~~~~l~~~ 63 (133)
|+|+|||.++++|+++|++|+.++ .+|||+|+|++++..|++++. |++ +.+|++|++.||++
T Consensus 8 m~m~SGi~vs~e~~~~f~~~k~~ks~~~~~~~~~~~~iifki~~~~~~Iivee~~~~~~~~~g~~~~~~~~ef~~~L~~~ 87 (174)
T 1ak6_A 8 GNSASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVGVTITDPFKHFVGMLPEK 87 (174)
T ss_dssp STTTTCCCCCSHHHHHHHHTSSSCCSSHHHHGGGCCCEECCCSTTSCSCCCCSSCCCCSSSTTTTCCSSSHHHHHTSCSS
T ss_pred ccccCCCccCHHHHHHHHHHHcCCcccccccccceeEEEEEECCCCcEEEEeccccccccccCcccCCCHHHHHHhCCCC
Confidence 458899999999999999999884 588999999988777888763 222 57899999999999
Q ss_pred CceeEEEeeeeecCCCCccccEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeEEEEeCCCCCCccC
Q 046281 64 ECRYAVYDFDFTTDENCQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPSEMSLD 132 (133)
Q Consensus 64 ~pry~~y~~~~~~~~~~~~~~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~~i~~~d~~dl~~~ 132 (133)
+|||++||+++.+.+| .+++|+||+|||++|++|+||+|||+|++|++.|+|++++|||+|++||+++
T Consensus 88 ~prY~ly~~~~~~~~~-~~~klvfI~W~Pd~a~vk~KMlYAssk~~lk~~l~gi~~~i~atd~~El~~e 155 (174)
T 1ak6_A 88 DCRYALYDASFETKES-RKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKHECQANGPEDLNRA 155 (174)
T ss_dssp CCCCEECCCCCCCSSC-SCCCCCEEEECCSSSCHHHHHSHHHHHHHHHHHCTTCSCCEEESSTTTTCHH
T ss_pred CcEEEEEeCcccCCCC-ccccEEEEEECCCCCCHHHhhHHHHHHHHHHHHhcCCeEEEEECChhhcCHH
Confidence 9999999999987776 8999999999999999999999999999999999999999999999999875
No 13
>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=230.21 Aligned_cols=122 Identities=31% Similarity=0.507 Sum_probs=110.8
Q ss_pred CcCCccCHHHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCC----ChHHHHhcC-CCCCceeEEEeeeeecCCC
Q 046281 5 SSGMAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNE----SYEDFTASL-PADECRYAVYDFDFTTDEN 79 (133)
Q Consensus 5 ~SGi~is~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~----~~~~~~~~l-~~~~pry~~y~~~~~~~~~ 79 (133)
+|||.++++|+++|++|+.++ +|||+|+|+++ +|+|+++++... +|++|++.| |+++|||++||+++++.+
T Consensus 1 ~SGi~v~~e~~~~f~~~k~~k-~r~ii~~i~~~--~ivv~~~~~~~~~~~~~~~~~~~~l~~~~~prY~v~~~~~~~~~- 76 (134)
T 2vac_A 1 SMGIHATEELKEFFAKARAGS-VRLIKVVIEDE--QLVLGASQEPVGRWDQDYDRAVLPLLDAQQPCYLLYRLDSQNAQ- 76 (134)
T ss_dssp CCSCEECHHHHHHHHHHHHSS-CSEEEEEEETT--EEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETT-
T ss_pred CCCcEeCHHHHHHHHHHhcCC-eEEEEEEecCC--EEEEEeecCcCcccccCHHHHHHhcCCCCCCEEEEEECCcCCCC-
Confidence 689999999999999999987 99999999874 799988776543 478999998 699999999999998764
Q ss_pred CccccEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeE--EEEeCCCCCCccC
Q 046281 80 CQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQV--ELQATDPSEMSLD 132 (133)
Q Consensus 80 ~~~~~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~--~i~~~d~~dl~~~ 132 (133)
+++|+||+|||++|++|.||+|||||++|++.|+|+++ +|||++++||+++
T Consensus 77 --~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~~~i~atd~~el~~~ 129 (134)
T 2vac_A 77 --GFEWLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGHIKDELFGTVKDDLSFA 129 (134)
T ss_dssp --EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGEEEEEEESSHHHHSHH
T ss_pred --CceEEEEEEcCCCCCHHHHhHHHHHHHHHHHHcCCCeeeEEEEeCChHHcCHH
Confidence 49999999999999999999999999999999999877 9999999999875
No 14
>1v6f_A MGMF-beta, GLIA maturation factor, beta; actin binding protein, cytoskeleton, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.109.1.2
Probab=100.00 E-value=4.9e-40 Score=228.71 Aligned_cols=124 Identities=18% Similarity=0.345 Sum_probs=115.7
Q ss_pred CCccCHHHHHHHHHhhcCC--CceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCCcccc
Q 046281 7 GMAVHDECKLKFLELKAKR--SYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENCQKSK 84 (133)
Q Consensus 7 Gi~is~e~~~a~~~l~~~~--~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~~~~ 84 (133)
.++++++|+++|++|+.++ .++||+|+|+.++++|+|+++++ +.+|++|.+.||+++|||++|||++++.+|+.+++
T Consensus 13 ~~~v~~e~~~a~~~lr~~k~~~~~~iifki~~~~~~I~v~~~~~-~~~~~el~~~Lp~~~prY~~~~~~~~~~~~~~~~k 91 (151)
T 1v6f_A 13 VCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELE-GVSPDELKDELPERQPRFIVYSYKYQHDDGRVSYP 91 (151)
T ss_dssp CCEECHHHHHHHHHHHTCCCSSCEEEEEEECSSSCEEEEEEEEE-SCCHHHHGGGSCSSSCEEEEEECCEECTTSCEECC
T ss_pred EEEECHHHHHHHHHHHhccCCCccEEEEEEcCCCcEEEEEecCC-CCCHHHHHhhCCCCCceEEEEecccccCCCccccc
Confidence 3688999999999999875 48999999999888999998654 57899999999999999999999999988888999
Q ss_pred EEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeEEEEeCCCCCCccC
Q 046281 85 IFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPSEMSLD 132 (133)
Q Consensus 85 ~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~~i~~~d~~dl~~~ 132 (133)
++||+|||++|++|+||+|||+|++|++.+ |++++|||+|++||+++
T Consensus 92 ~vfI~w~P~~a~vk~KMlYAssk~~l~~~l-gi~~~iea~d~~El~~~ 138 (151)
T 1v6f_A 92 LCFIFSSPVGCKPEQQMMYAGSKNKLVQTA-ELTKVFEIRNTEDLTEE 138 (151)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHHHHT-TCSEEEEESSGGGCCHH
T ss_pred EEEEEECCCCCChHHheehHHHHHHHHHHh-CCeEEEEECChHHCCHH
Confidence 999999999999999999999999999999 89999999999999875
No 15
>3q2b_A Pfadf1, cofilin/actin-depolymerizing factor homolog 1; actin regulator, actin-binding protein; HET: TAR; 1.60A {Plasmodium falciparum} PDB: 2xf1_A
Probab=100.00 E-value=1.4e-41 Score=229.49 Aligned_cols=118 Identities=25% Similarity=0.540 Sum_probs=106.9
Q ss_pred CCCCcCCccCHHHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCC---ceeEEEeeeeecCC
Q 046281 2 ANSSSGMAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADE---CRYAVYDFDFTTDE 78 (133)
Q Consensus 2 ~~~~SGi~is~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~---pry~~y~~~~~~~~ 78 (133)
++|+|||.+++||+++|++|+.++++|||+|+|++ ++|+|+++++ ..+|++|.+.||+++ |||++||+
T Consensus 1 ~~m~SGi~vs~e~~~~f~~lk~~k~~~~ii~kI~~--~~ivv~~~~~-~~~~~~f~~~Lp~~~~~~prY~vy~~------ 71 (124)
T 3q2b_A 1 GSMISGIRVNDNCVTEFNNMKIRKTCGWIIFVIQN--CEIIIHSKGA-STTLTELVQSIDKNNEIQCAYVVFDA------ 71 (124)
T ss_dssp ---CCSCEECHHHHHHHHHHHHHTSSEEEEEEEET--TEEEEEEEEE-CSCHHHHHHHHHHCTTCSEEEEEEEC------
T ss_pred CCCCCCCccCHHHHHHHHHHhcCCCcEEEEEEEcC--CEEEEeccCC-CCCHHHHHHHccccCCCCcEEEEEec------
Confidence 46899999999999999999998779999999998 3788888765 579999999999999 99999997
Q ss_pred CCccccEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCee-EEEEeCCCCCCcc
Q 046281 79 NCQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQ-VELQATDPSEMSL 131 (133)
Q Consensus 79 ~~~~~~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~-~~i~~~d~~dl~~ 131 (133)
+++++||+|||++|++|+||+|||||++|++.|+|++ .+++++|++||++
T Consensus 72 ---~~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~g~~~~~i~a~d~~dlt~ 122 (124)
T 3q2b_A 72 ---VSKIHFFMYARESSNSRDRMTYASSKQAILKKIEGVNVLTSVIESAQDVAD 122 (124)
T ss_dssp ---SSCEEEEEEECTTSCHHHHHHHHHHHHHHHTTSTTSEECCSCBCSHHHHTT
T ss_pred ---CCCEEEEEECCCCCChhHhhhhHHHHHHHHHHhCCCceEEEEecCHHHccc
Confidence 4699999999999999999999999999999999998 5899999999975
No 16
>2l72_A Tgadf, actin depolymerizing factor, putative; ADF/cofilin, actin binding, protein binding; NMR {Toxoplasma gondii}
Probab=100.00 E-value=2.4e-40 Score=227.31 Aligned_cols=117 Identities=40% Similarity=0.771 Sum_probs=108.1
Q ss_pred CCcCCccCHHHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCCccc
Q 046281 4 SSSGMAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENCQKS 83 (133)
Q Consensus 4 ~~SGi~is~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~~~ 83 (133)
|+|||+++++|+++|++|+.++..|||+|+|+. ++|+++++++ + +|++|.+.||+++|||++|| +| +
T Consensus 22 m~sGi~vs~e~~~af~~lk~~k~~~~ii~~I~~--~eivv~~~g~-~-~~~el~~~Lp~~~prY~~y~------dg---~ 88 (139)
T 2l72_A 22 MASGMGVDENCVARFNELKIRKTVKWIVFKIEN--TKIVVEKDGK-G-NADEFRGALPANDCRFGVYD------CG---N 88 (139)
T ss_dssp CCTTCEECHHHHHHHHHHTTTTCCCEEEEEEET--TEEEEEEEES-S-HHHHHHHHCCCCSCCEEEEE------CS---S
T ss_pred ccCCCCcCHHHHHHHHHHhCCCCeeEEEEEEcC--CEEEEeecCC-C-CHHHHHHhCCCCCcEEEEEc------CC---C
Confidence 789999999999999999998779999999998 5688888776 4 99999999999999999999 34 8
Q ss_pred cEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeEE-EEeCCCCCCccCC
Q 046281 84 KIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVE-LQATDPSEMSLDI 133 (133)
Q Consensus 84 ~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~~-i~~~d~~dl~~~~ 133 (133)
+|+||+|||++|++|+||+|||+|++|++.|+|+++. +++++++||+++.
T Consensus 89 k~vFI~w~Pd~a~vk~KMlYASsk~~lk~~l~g~~v~~iea~~~~DLte~~ 139 (139)
T 2l72_A 89 KIQFVLWCPDNAPVKPRMTYASSKDALLKKLDGATAVALEAHEMGDLAPLA 139 (139)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCSCCSCEEEESSTTTTSCCC
T ss_pred cEEEEEECCCCCChhHeeehHhhHHHHHHHhCCceEEEEEeCCHHHCccCC
Confidence 9999999999999999999999999999999998765 9999999999874
No 17
>2w0i_A Twinfilin-2; cytoskeleton, actin-binding, actin binding, cofilin-like, phosphoprotein, phosphorylation, transferase, protein tyros kinase-9; 1.8A {Homo sapiens}
Probab=100.00 E-value=9.2e-40 Score=223.48 Aligned_cols=121 Identities=19% Similarity=0.412 Sum_probs=113.4
Q ss_pred CccCHHHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCCccccEEE
Q 046281 8 MAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENCQKSKIFF 87 (133)
Q Consensus 8 i~is~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~~~~~vf 87 (133)
++|+++|+++|++|+.++ ++||+|+|+.++++|+|++++ +.+|++|.+.||+++|||++|||++++.+| .+++++|
T Consensus 2 ~~v~~e~~~a~~~lk~~~-~~~ii~~id~~~~~I~v~~~~--~~~~~el~~~Lp~~~~rY~~y~~~~~~~~~-~~~k~vf 77 (135)
T 2w0i_A 2 MPLQPEAQRALQQLKQKM-VNYIQMKLDLERETIELVHTE--PTDVAQLPSRVPRDAARYHFFLYKHTHEGD-PLESVVF 77 (135)
T ss_dssp CCBCHHHHHHHHHHHTTS-CSEEEEEEETTTTEEEEEECC--CCCGGGGGGGSCSSSCEEEEEEEEEEETTE-EEEEEEE
T ss_pred cccCHHHHHHHHHHHcCC-CcEEEEEEeCCCCEEEEEecC--CCCHHHHHhhCCCCCcEEEEEecccccCCC-CCccEEE
Confidence 679999999999999987 999999999988899999875 789999999999999999999999987665 8999999
Q ss_pred EEEcCC-CCCcchhhhhHHhHHHHHhhcC---Cee--EEEEeCCCCCCccC
Q 046281 88 VAWSPD-TSRIRSKMLYASSKDRFRRELD---GVQ--VELQATDPSEMSLD 132 (133)
Q Consensus 88 I~w~Pd-~a~vk~kMlYassk~~l~~~l~---g~~--~~i~~~d~~dl~~~ 132 (133)
|+|||+ +|++|+||+|||+|+.|++.+. |++ ++|||+|++||+++
T Consensus 78 I~w~P~~~~~vk~kMlYassk~~l~~~l~~~~Gi~v~~~iea~d~~el~~~ 128 (135)
T 2w0i_A 78 IYSMPGYKCSIKERMLYSSCKSRLLDSVEQDFHLEIAKKIEIGDGAELTAE 128 (135)
T ss_dssp EEECCGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCGGGCCHH
T ss_pred EEECCCCCCCHHHHhHhHHhHHHHHHHHhhccCCceeEEEEcCChhhcCHH
Confidence 999999 9999999999999999999998 876 89999999999875
No 18
>2d8b_A Twinfilin-1; cell-free protein synthesis, actin-binding protein, developmental regulation, cellular remodeling, cytoskeleton, morphology; NMR {Mus musculus}
Probab=100.00 E-value=2.4e-39 Score=228.37 Aligned_cols=125 Identities=19% Similarity=0.401 Sum_probs=117.0
Q ss_pred CCcCCc--cCHHHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCCc
Q 046281 4 SSSGMA--VHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENCQ 81 (133)
Q Consensus 4 ~~SGi~--is~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~ 81 (133)
.+|||. ++++|+++|++|+.+ .++||+|+|+.++++|+|++++ +.+|++|.+.||+++|||++|||++++.++ .
T Consensus 21 ~~sgv~~~v~~e~~~a~~~lk~~-~~~~vifkId~~~~~I~v~~~~--~~~~~el~~~Lp~~~pRY~~y~~~~~~~~~-~ 96 (166)
T 2d8b_A 21 TLQGVAFPISRDAFQALEKLSKK-QLNYVQLEIDIKNETIILANTE--NTELRDLPKRIPKDSARYHFFLYKHSHEGD-Y 96 (166)
T ss_dssp CSCCCCCCBCHHHHHHHHHHHTT-CCSCCEEEEETTTTEEEEEECC--CCCSTTHHHHSCSSCCEEEEEEEEEEETTE-E
T ss_pred ccCCcccCcCHHHHHHHHHHHcC-CCcEEEEEEeCCCCEEEEEecC--CCCHHHHHHhCCCCCceEEEEeccccCCCC-c
Confidence 358998 999999999999997 6899999999988899999876 679999999999999999999999998776 6
Q ss_pred cccEEEEEEcCC-CCCcchhhhhHHhHHHHHhhcC---Ce--eEEEEeCCCCCCccC
Q 046281 82 KSKIFFVAWSPD-TSRIRSKMLYASSKDRFRRELD---GV--QVELQATDPSEMSLD 132 (133)
Q Consensus 82 ~~~~vfI~w~Pd-~a~vk~kMlYassk~~l~~~l~---g~--~~~i~~~d~~dl~~~ 132 (133)
+++++||+|||+ +|++|+||+|||+|..|++.+. |+ +++|||+|++||+++
T Consensus 97 ~~k~vFI~w~P~~~~~ik~KMlYAssk~~l~~~l~~~~Gi~v~~~iea~d~~El~~~ 153 (166)
T 2d8b_A 97 LESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTAD 153 (166)
T ss_dssp EEEEEEEEECCCSSSCHHHHHHHHHTTHHHHHHHTTSSCCCCSEEEEESSSTTCCHH
T ss_pred cccEEEEEECCCCCCCHHHeeehhhhHHHHHHHHhhccCCceeEEEEeCChHHCCHH
Confidence 999999999999 9999999999999999999999 87 899999999999875
No 19
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=100.00 E-value=1.1e-38 Score=219.46 Aligned_cols=122 Identities=15% Similarity=0.358 Sum_probs=110.9
Q ss_pred CCcCCccC---HHHHHHHHHhhcCC--CceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCC
Q 046281 4 SSSGMAVH---DECKLKFLELKAKR--SYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDE 78 (133)
Q Consensus 4 ~~SGi~is---~e~~~a~~~l~~~~--~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~ 78 (133)
+++||.++ ++|+++|++|+.++ .++||+|+|++ +++|+|+.+|+ +|++|.+.||+++|||++||++ .+
T Consensus 2 ~m~~i~l~~~~~e~~~a~~~~~~~~~~~~~~ii~~i~~-~~~i~v~~~g~---~~~el~~~l~~~~~rY~~~~~~---~~ 74 (141)
T 1hqz_1 2 ALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNA-KKEYEPESTGS---SFHDFLQLFDETKVQYGLARVS---PP 74 (141)
T ss_dssp -CCCCCCSTTHHHHHHHHHHHHHTCCTTCCEEEEEECT-TSCEEEEEEES---CHHHHHTCCCTTSCEEEEEEEC---CT
T ss_pred cccccccCCCCHHHHHHHHHHHhCCCCCceEEEEEEcC-CCEEEEEeecC---CHHHHHhhCCCCceEEEEEEEe---cC
Confidence 56688885 99999999999885 68999999998 46899998863 8999999999999999999998 45
Q ss_pred CCccccEEEEEEcCCCCCcchhhhhHHhHHHHHh-hcCCeeEEEEeCCCCCCccC
Q 046281 79 NCQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRR-ELDGVQVELQATDPSEMSLD 132 (133)
Q Consensus 79 ~~~~~~~vfI~w~Pd~a~vk~kMlYassk~~l~~-~l~g~~~~i~~~d~~dl~~~ 132 (133)
|+.++++|||+|||++||+|+||+|||+|++|++ .|+|++++|++++++||+++
T Consensus 75 ~~~~~k~vfI~w~Pd~~~vk~Kmlyas~k~~l~~~~l~g~~~~i~a~~~~el~~e 129 (141)
T 1hqz_1 75 GSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDEN 129 (141)
T ss_dssp TCSCCEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTSCSCSEEEEESSGGGGCHH
T ss_pred CCceeeEEEEEECCCCCChhheEEEeccHHHHHHHhCCceEEEEEECChHHCCHH
Confidence 7789999999999999999999999999999997 99999999999999999875
No 20
>3daw_B Twinfilin-1, protein A6; actin depolymerisation, actin binding proteins, cytoskeleton, structural protein/contractIle protein complex; HET: ATP; 2.55A {Mus musculus} PDB: 2hd7_A
Probab=100.00 E-value=4.5e-38 Score=221.35 Aligned_cols=125 Identities=18% Similarity=0.389 Sum_probs=113.9
Q ss_pred CCcCC--ccCHHHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCCc
Q 046281 4 SSSGM--AVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENCQ 81 (133)
Q Consensus 4 ~~SGi--~is~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~ 81 (133)
..+|| +|+++|+++|++|+.++ .+||+|+|+.++++|+|+++ .+.+|++|.+.||+++|||++|+|++++. |+.
T Consensus 16 ~~~gv~~~v~~e~~~a~~~lk~~~-~~~iifkId~~~e~I~v~~~--~~~~~~df~~~Lp~~~pRY~vyd~~~~~~-g~~ 91 (164)
T 3daw_B 16 TLQGVAFPISRDAFQALEKLSKKQ-LNYVQLEIDIKNETIILANT--ENTELRDLPKRIPKDSARYHFFLYKHSHE-GDY 91 (164)
T ss_dssp --CCCCCCBCHHHHHHHHHHHTTS-CSEEEEEEETTTTEEEEEEC--CCCCGGGSGGGSCSSSCEEEEEEEEEEET-TEE
T ss_pred ccCcceEEECHHHHHHHHHHHcCC-ceEEEEEEeCCCCEEEEEeC--CCCCHHHHHHhCCccCceEEEEecccccC-CCc
Confidence 45777 79999999999999985 89999999998899999987 36899999999999999999999999865 666
Q ss_pred cccEEEEEEcCC-CCCcchhhhhHHhHHHHHhhcC---Ce--eEEEEeCCCCCCccC
Q 046281 82 KSKIFFVAWSPD-TSRIRSKMLYASSKDRFRRELD---GV--QVELQATDPSEMSLD 132 (133)
Q Consensus 82 ~~~~vfI~w~Pd-~a~vk~kMlYassk~~l~~~l~---g~--~~~i~~~d~~dl~~~ 132 (133)
..+++||+|||+ +|++|+||+|||+|++|++.+. |+ .++||++|++||+++
T Consensus 92 ~~~~ifi~~~P~~~a~ik~kMlYASsK~~l~~~l~~~~Gi~i~k~iea~d~~Elt~e 148 (164)
T 3daw_B 92 LESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTAD 148 (164)
T ss_dssp EEEEEEEEECCSTTSCHHHHHHHHHTHHHHHHHHHHHHCCCEEEEEEESSSSSCCHH
T ss_pred cccEEEEEEcCCCCCCHHHHHHHHHhHHHHHHHHhhccCCceeEEEEeCChHHcCHH
Confidence 788999999999 9999999999999999999997 87 889999999999875
No 21
>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=210.34 Aligned_cols=124 Identities=19% Similarity=0.307 Sum_probs=113.4
Q ss_pred CCcCCccC-----HHHHHHHHHhhcCC-CceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecC
Q 046281 4 SSSGMAVH-----DECKLKFLELKAKR-SYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTD 77 (133)
Q Consensus 4 ~~SGi~is-----~e~~~a~~~l~~~~-~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~ 77 (133)
++||+.++ ++|+++|++++.++ .+||++|+|+++..+|+|..+|+ .+|++|.+.|++++|||++||+.+
T Consensus 4 ~~~~m~~~l~~~~~e~~~a~~~v~~~~~~~~wi~~~i~~~~~~l~v~~~G~--~~~~e~~~~L~~~~~~Y~~~r~~~--- 78 (146)
T 1x67_A 4 GSSGMAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGE--GGLEEMVEELNSGKVMYAFCRVKD--- 78 (146)
T ss_dssp SSSSSCCCCCTTHHHHHHHHHHHHCSSSSCSEEEEEESSSSSCEEEEEEES--SCHHHHHHHCCTTSEEEEEEEEEC---
T ss_pred cccceEEEcCCCCHHHHHHHHHHHcCCCCccEEEEEEeCCCcEEEEEeccC--CCHHHHHhhCCCCceEEEEEEEEc---
Confidence 67787776 99999999999987 49999999988766899998873 589999999999999999999984
Q ss_pred CCCccccEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCeeEEEEeCCCCCCccC
Q 046281 78 ENCQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPSEMSLD 132 (133)
Q Consensus 78 ~~~~~~~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~~~~i~~~d~~dl~~~ 132 (133)
+++.++|+|||.||||++|+|+||+||+++++|++.|+|++++|++++++||+++
T Consensus 79 ~~~~~~K~vfI~W~pd~a~v~~Km~yas~k~~lk~~l~g~~~ei~at~~~el~~~ 133 (146)
T 1x67_A 79 PNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPE 133 (146)
T ss_dssp SSSCSEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTEEEEECCCSGGGGCHH
T ss_pred CCCCeeeEEEEEECCCCCChhheeeehhhHHHHHHhcCCcEEEEEeCChHHCCHH
Confidence 4567999999999999999999999999999999999999999999999999875
No 22
>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A
Probab=100.00 E-value=7.9e-33 Score=190.34 Aligned_cols=116 Identities=16% Similarity=0.327 Sum_probs=107.1
Q ss_pred CHHHHHHHHHhhcCC-CceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCCccccEEEEE
Q 046281 11 HDECKLKFLELKAKR-SYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENCQKSKIFFVA 89 (133)
Q Consensus 11 s~e~~~a~~~l~~~~-~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~~~~~vfI~ 89 (133)
+|+|.++|++++.++ .++|++|+++++ +|+|..+|+ +|++|++.||+++|||++||+. .+++++.++|+|||.
T Consensus 6 ~~~~~~a~~~v~~~~~~~~wilf~~~~~--~i~v~~~G~---g~~e~~~~L~~~~~~Ya~~r~~-~~~~~~~~~K~vfI~ 79 (141)
T 1t3y_A 6 KEACRAAYNLVRDDGSAVIWVTFKYDGS--TIVPGEQGA---EYQHFIQQCTDDVRLFAFVRFT-TGDAMSKRSKFALIT 79 (141)
T ss_dssp HHHHHHHHHHHHCTTSSCCEEEEEEETT--EEEEEEEES---SHHHHHHHCCTTCEEEEEEEEE-ECSGGGCEEEEEEEE
T ss_pred hHHHHHHHHHHHcCCCCceEEEEEEcCC--EEEEEecCC---CHHHHHhhCCCCceEEEEEEEE-ecCCCCceeeEEEEE
Confidence 689999999999987 489999999883 499998874 5999999999999999999996 556777899999999
Q ss_pred EcCCCCCcchhhhhHHhHHHHHhhcCCeeEEEEeCCCCCCccC
Q 046281 90 WSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPSEMSLD 132 (133)
Q Consensus 90 w~Pd~a~vk~kMlYassk~~l~~~l~g~~~~i~~~d~~dl~~~ 132 (133)
|||+++|++.||+||+++..|++.|+|++.+|+|+|++||+++
T Consensus 80 W~pd~~~~~~K~~~as~k~~vk~~l~g~~~~i~a~d~~el~~~ 122 (141)
T 1t3y_A 80 WIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEED 122 (141)
T ss_dssp EECTTSCHHHHHHHHHHHHHHTTTSCCCSEEEEECSGGGGSHH
T ss_pred ECCCCCCHHHhhhHHHHHHHHHHHhcccEEEEEeCChHHCCHH
Confidence 9999999999999999999999999999999999999999875
No 23
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=58.92 E-value=29 Score=21.51 Aligned_cols=56 Identities=13% Similarity=0.259 Sum_probs=40.5
Q ss_pred HHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEE
Q 046281 13 ECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAV 69 (133)
Q Consensus 13 e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~ 69 (133)
++..++.++..-.+.+..+..++.+.+.+.+.=.|. +.+|+++.+.+..-.+.-.=
T Consensus 23 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~-~id~d~I~~~IE~~Gg~IHS 78 (97)
T 2raq_A 23 EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGN-DLDFDEITRAIESYGGSIHS 78 (97)
T ss_dssp HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECS-SCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec-CCCHHHHHHHHHHcCCeEEe
Confidence 455666666665668888999999888777766564 78999999888766554433
No 24
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S*
Probab=58.79 E-value=34 Score=22.10 Aligned_cols=95 Identities=14% Similarity=0.173 Sum_probs=56.5
Q ss_pred HHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCCccccEEEEEEcCCCC
Q 046281 16 LKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENCQKSKIFFVAWSPDTS 95 (133)
Q Consensus 16 ~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~~~~~vfI~w~Pd~a 95 (133)
.+|+.... ....-|.+|++. +.+.|.+. .+ ..+-..+ ||++.. .+.... .+....+-+|+...+
T Consensus 9 ~~~~~~g~--~~gl~vWrIe~~-~~~~vp~~-----~~----G~Fy~gd-~YIvl~-ty~~~~--g~~~~~i~~W~G~~s 72 (128)
T 3cip_G 9 PEFLKAGK--EPGLQIWRVEKF-DLVPVPTN-----LY----GDFFTGD-AYVILK-TVQLRN--GNLQYDLHYWLGNEC 72 (128)
T ss_dssp HHHHHTTS--SSEEEEEEEETT-EEEECCGG-----GT----TEEETTC-EEEEEE-EEECTT--SCEEEEEEEEECTTC
T ss_pred hhHHhcCC--CCCeEEEEEeCC-EEEECChH-----Hc----CeecCCC-eEEEEE-EEecCC--CceEEEEEEEcCCCC
Confidence 45666543 355778888864 33333221 11 1222334 576643 222222 355778899999999
Q ss_pred CcchhhhhHHhHHHHHhhcCCee---EEEEeCCC
Q 046281 96 RIRSKMLYASSKDRFRRELDGVQ---VELQATDP 126 (133)
Q Consensus 96 ~vk~kMlYassk~~l~~~l~g~~---~~i~~~d~ 126 (133)
+..++-.-|.-...|...++|-. .+.|..++
T Consensus 73 s~de~g~Aa~~aveLd~~lgg~~vq~R~~QG~E~ 106 (128)
T 3cip_G 73 SQDESGAAAIFTVQLDDYLNGRAVQHREVQGFES 106 (128)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTCEEEEEEETTCCC
T ss_pred CcchHHHHHHHHHHHHHHcCCCceEEEeECCCCC
Confidence 99999877777777888887643 34444443
No 25
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G*
Probab=54.78 E-value=44 Score=22.25 Aligned_cols=86 Identities=13% Similarity=0.163 Sum_probs=52.0
Q ss_pred HHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCCccccEEEEEEcCCCC
Q 046281 16 LKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENCQKSKIFFVAWSPDTS 95 (133)
Q Consensus 16 ~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~~~~~vfI~w~Pd~a 95 (133)
.+|+.... ....-|.+|++. +.+.|.+. .+ ..+-+.+ ||++.. .+.... .+....+-+|+...+
T Consensus 28 ~~f~~~g~--~~gl~VWrIe~~-~~v~vp~~-----~~----G~FysgD-~YIVl~-ty~~~~--g~~~~~IyfW~G~~s 91 (150)
T 2ff3_A 28 PEFLKAGK--EPGLQIWRVEKF-DLVPVPTN-----LY----GDFFTGD-AYVILK-TVQLRN--GNLQYDLHYWLGNEC 91 (150)
T ss_dssp HHHHHTTS--SSEEEEEEEETT-EEEECCGG-----GT----TEEETTS-EEEEEE-EEECTT--SSEEEEEEEEECTTC
T ss_pred hhhhccCC--CCCeEEEEEeCC-EEEECChH-----Hc----CeecCCC-eEEEEE-EEecCC--CceEEEEEEEeCCCC
Confidence 46666543 355778888863 33333221 11 1223334 476543 222222 356778999999999
Q ss_pred CcchhhhhHHhHHHHHhhcCCe
Q 046281 96 RIRSKMLYASSKDRFRRELDGV 117 (133)
Q Consensus 96 ~vk~kMlYassk~~l~~~l~g~ 117 (133)
+..++-.-|.-...|...++|-
T Consensus 92 s~de~gaAA~~aveLd~~lgg~ 113 (150)
T 2ff3_A 92 SQDESGAAAIFTVQLDDYLNGR 113 (150)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTC
T ss_pred CchhHHHHHHHHHHHHHHcCCC
Confidence 9999987776667777888763
No 26
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A
Probab=53.92 E-value=41 Score=21.61 Aligned_cols=57 Identities=14% Similarity=0.083 Sum_probs=38.6
Q ss_pred ceeEEEeeeeecCCCCccccEEEEEEcCCCCCcchhhhhHHhHHHHHhhcCCe---eEEEEeCC
Q 046281 65 CRYAVYDFDFTTDENCQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGV---QVELQATD 125 (133)
Q Consensus 65 pry~~y~~~~~~~~~~~~~~~vfI~w~Pd~a~vk~kMlYassk~~l~~~l~g~---~~~i~~~d 125 (133)
-||++.. .+. .. .+....+-+|+...++..++-.-|.--..|.+.++|- ..+.|..+
T Consensus 43 d~YIvl~-t~~-~~--g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg~~vq~R~~QG~E 102 (126)
T 2vik_A 43 DCYVLLS-TRK-TG--SGFSYNIHYWLGKNSSQDEQGAAAIYTTQMDEYLGSVAVQHREVQGHE 102 (126)
T ss_dssp SCEEEEE-EEE-CS--SSEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTSCSCEEEEETTTS
T ss_pred CeEEEEE-ecc-CC--CceeEEEEEEeCCCCCchhHHHHHHHHHHHHHHcCCCccEEEEECCCC
Confidence 3476654 232 22 3557788999999999999987777777777888763 33454444
No 27
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1
Probab=50.96 E-value=51 Score=21.79 Aligned_cols=86 Identities=13% Similarity=0.163 Sum_probs=52.0
Q ss_pred HHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCCccccEEEEEEcCCCC
Q 046281 16 LKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENCQKSKIFFVAWSPDTS 95 (133)
Q Consensus 16 ~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~~~~~vfI~w~Pd~a 95 (133)
.+|+.... ....-|.+|++. +.+.|.+. .+ ..+-..+ ||++.. .+.... .+...++-+|+...+
T Consensus 6 ~~f~~~g~--~~gl~VWrIe~~-~~~~vp~~-----~~----G~Fy~gd-~YIvl~-ty~~~~--g~~~~~i~~W~G~~s 69 (147)
T 1t44_G 6 PEFLKAGK--EPGLQIWRVEKF-DLVPVPTN-----LY----GDFFTGD-AYVILK-TVQLRN--GNLQYDLHYWLGNEC 69 (147)
T ss_dssp HHHHHTTS--SSEEEEEEEETT-EEEECCGG-----GT----TEEETTC-EEEEEE-EEECTT--SCEEEEEEEEECTTC
T ss_pred hhhhccCC--CCCeEEEEEeCC-EEEECChH-----Hc----CeecCCC-eEEEEE-EEecCC--CceEEEEEEEeCCCC
Confidence 35665443 355778888864 33333221 11 1222334 466643 222222 355778999999999
Q ss_pred CcchhhhhHHhHHHHHhhcCCe
Q 046281 96 RIRSKMLYASSKDRFRRELDGV 117 (133)
Q Consensus 96 ~vk~kMlYassk~~l~~~l~g~ 117 (133)
+..++-.-|.-...|...++|-
T Consensus 70 s~de~g~Aa~~aveLd~~lgg~ 91 (147)
T 1t44_G 70 SQDESGAAAIFTVQLDDYLNGR 91 (147)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTC
T ss_pred ChhHHHHHHHHHHHHHHHcCCC
Confidence 9999987777777788888763
No 28
>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens}
Probab=47.36 E-value=68 Score=23.80 Aligned_cols=95 Identities=15% Similarity=0.192 Sum_probs=54.8
Q ss_pred HHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEEeeeeecCCCCccccEEEEEEcCCCC
Q 046281 16 LKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVYDFDFTTDENCQKSKIFFVAWSPDTS 95 (133)
Q Consensus 16 ~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~~~~~vfI~w~Pd~a 95 (133)
.+|+......+ .-|.+|++- +.+.|.+. .+ ..+-..+ ||+++.. |.... .+..+.+-+|+...+
T Consensus 24 ~~~~~~g~~~G--l~iWrIe~~-~~~~v~~~-----~~----G~Fy~gd-~Yivl~t-~~~~~--g~~~~~i~~W~G~~s 87 (297)
T 3tu5_B 24 PEFLKAGKEPG--LQIWRVEKF-DLVPVPTN-----LY----GDFFTGD-AYVILKT-VQLRN--GNLQYDLHYWLGNEC 87 (297)
T ss_dssp HHHHHTTSSSE--EEEEEEETT-EEEECCGG-----GT----TEEETTC-EEEEEEE-EECTT--SCEEEEEEEEECTTC
T ss_pred hhHhccCCCCc--eEEEEEcCC-EEEECCHH-----Hc----CeecCCC-eEEEeEe-EECCC--CceeEEEEEEeCCCC
Confidence 45655544333 557778763 22333221 11 1222333 5777643 22222 345677889999999
Q ss_pred CcchhhhhHHhHHHHHhhcCCe--e-EEEEeCCC
Q 046281 96 RIRSKMLYASSKDRFRRELDGV--Q-VELQATDP 126 (133)
Q Consensus 96 ~vk~kMlYassk~~l~~~l~g~--~-~~i~~~d~ 126 (133)
+.-++..-|.-...|...|+|- . .++|..+.
T Consensus 88 s~de~g~aa~~av~Ld~~lgg~~vq~Re~Qg~Es 121 (297)
T 3tu5_B 88 SQDESGAAAIFTVQLDDYLNGRAVQHREVQGFES 121 (297)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTCCEEEEEETTCCC
T ss_pred ChhHHHHHHHHHHHHHHHcCCCceEEEEeCCcCC
Confidence 9999877777777788888763 2 35554443
No 29
>2p2e_A Putative Fe-S biosynthesis protein; hypothetical protein, beta-barrel, 10399L structural genomics, protein structure initiative, PSI-2; 2.48A {Lactobacillus salivarius} SCOP: b.124.1.1
Probab=45.26 E-value=25 Score=22.64 Aligned_cols=28 Identities=11% Similarity=0.309 Sum_probs=22.7
Q ss_pred CCccCHHHHHHHHHhhcCCCceEEEEEEe
Q 046281 7 GMAVHDECKLKFLELKAKRSYRFIVFKIE 35 (133)
Q Consensus 7 Gi~is~e~~~a~~~l~~~~~~~~vi~~i~ 35 (133)
.|.+++.+.+.++++...+. +.+.|+++
T Consensus 4 ~ItlT~~A~~~l~~~l~~~~-~~l~Lr~~ 31 (128)
T 2p2e_A 4 KITVTDDAAKKLQRYTDDSN-AVLLLDFD 31 (128)
T ss_dssp EEEECHHHHHHHHHHHTCTT-EEEEEEEC
T ss_pred EEEECHHHHHHHHHHHhcCC-ceEEEEEe
Confidence 49999999999999877653 35778888
No 30
>2ay0_A Bifunctional PUTA protein; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 2.10A {Escherichia coli} SCOP: a.43.1.11
Probab=45.01 E-value=7.8 Score=21.53 Aligned_cols=24 Identities=13% Similarity=0.338 Sum_probs=18.7
Q ss_pred CCCCCcCCccCHHHHHHHHHhhcC
Q 046281 1 MANSSSGMAVHDECKLKFLELKAK 24 (133)
Q Consensus 1 ~~~~~SGi~is~e~~~a~~~l~~~ 24 (133)
|++..-+|.++++..+.++.+...
T Consensus 1 M~~~~~svrL~~el~~rL~~lA~~ 24 (58)
T 2ay0_A 1 MGTTTMGVMLDDATRERIKSAATR 24 (58)
T ss_dssp --CEEEEEEECHHHHHHHHHHHHH
T ss_pred CCCcceEeECCHHHHHHHHHHHHH
Confidence 666777899999999999998653
No 31
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=42.32 E-value=31 Score=21.33 Aligned_cols=57 Identities=11% Similarity=0.199 Sum_probs=38.2
Q ss_pred HHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeEEE
Q 046281 13 ECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYAVY 70 (133)
Q Consensus 13 e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~~y 70 (133)
++..++.++..-.+.+..+..++.+.+.+.+.=.|. +.+|+++.+.+..-.+.-.=.
T Consensus 22 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~-~idfd~I~~~IE~~Gg~IHSI 78 (96)
T 2x3d_A 22 DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGT-SLNFDDIRKMLEEEGCAIHSI 78 (96)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEES-SCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec-CCCHHHHHHHHHHcCCeEEee
Confidence 444455555444457888888998877776665554 789999998887665544333
No 32
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=39.28 E-value=18 Score=22.57 Aligned_cols=55 Identities=18% Similarity=0.254 Sum_probs=37.4
Q ss_pred HHHHHHHHhhcCCCceEEEEEEeCCceEEEEeecCCCCCChHHHHhcCCCCCceeE
Q 046281 13 ECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRYA 68 (133)
Q Consensus 13 e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~pry~ 68 (133)
++..++.++..-.+.+..+..++.+.+.+.+.-.|. +.+|+++.+.+..-.+.-.
T Consensus 23 dlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~-dIdfd~I~~~IE~~GgvIH 77 (100)
T 3bpd_A 23 VFALKLSELENVDGVNIHLSEIDQATENIKITILGN-NLDYEQIKGVIEDMGGVIH 77 (100)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEE-EECHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec-CCCHHHHHHHHHHcCCeEE
Confidence 344555555544457888888998877766655553 6899999988876655433
No 33
>2ygw_A Malonyl-COA decarboxylase, mitochondrial; lyase; 2.80A {Homo sapiens}
Probab=31.64 E-value=25 Score=27.87 Aligned_cols=35 Identities=6% Similarity=0.027 Sum_probs=27.5
Q ss_pred CCChHHHHhcCCCCCceeEEEeeeeecCCCCccccEEEEEE
Q 046281 50 NESYEDFTASLPADECRYAVYDFDFTTDENCQKSKIFFVAW 90 (133)
Q Consensus 50 ~~~~~~~~~~l~~~~pry~~y~~~~~~~~~~~~~~~vfI~w 90 (133)
=.+|+|+..-|..+.-||+||.... ..+++|||.-
T Consensus 191 I~~W~DLkrRL~pdRRCfaFFHp~m------P~EPLIfVeV 225 (460)
T 2ygw_A 191 VKNWMDMKRRVGPYRRCYFFSHCST------PGEPLVVLHV 225 (460)
T ss_dssp CCSHHHHHHHTSTTEEEEEEEETTB------TTCCSEEEEE
T ss_pred cCCHHHHHHhcCCCCeEEEecCCCC------CCCCeEEEee
Confidence 4589999999988889999997653 2467788764
No 34
>2k5j_A Uncharacterized protein YIIF; structure, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Shigella flexneri 5 str}
Probab=28.85 E-value=26 Score=20.61 Aligned_cols=21 Identities=10% Similarity=0.082 Sum_probs=17.2
Q ss_pred CCCcCCccCHHHHHHHHHhhc
Q 046281 3 NSSSGMAVHDECKLKFLELKA 23 (133)
Q Consensus 3 ~~~SGi~is~e~~~a~~~l~~ 23 (133)
|+.-+|.++++..+.|+.+..
T Consensus 9 m~risI~Lpdel~~~Ld~la~ 29 (80)
T 2k5j_A 9 MGRILLDLSNEVIKQLDDLEV 29 (80)
T ss_dssp CCEEEEEECHHHHHHHHHHHH
T ss_pred eEEEEEECCHHHHHHHHHHHH
Confidence 455678899999999998854
No 35
>2gpe_A Bifunctional protein PUTA; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 1.90A {Escherichia coli} PDB: 2rbf_A* 2jxg_A 2jxh_A 2jxi_A*
Probab=28.81 E-value=13 Score=19.59 Aligned_cols=23 Identities=13% Similarity=0.318 Sum_probs=17.9
Q ss_pred CCCCCcCCccCHHHHHHHHHhhc
Q 046281 1 MANSSSGMAVHDECKLKFLELKA 23 (133)
Q Consensus 1 ~~~~~SGi~is~e~~~a~~~l~~ 23 (133)
|++..-+|.+++++.+.++.+..
T Consensus 1 M~~~~~sirl~~~l~~~l~~lA~ 23 (52)
T 2gpe_A 1 MGTTTMGVKLDDATRERIKSAAT 23 (52)
T ss_dssp -CEEEEEEEEEHHHHHHHHHHHH
T ss_pred CCcceEEEECCHHHHHHHHHHHH
Confidence 55556678999999999998854
No 36
>3vbh_A EV71, genome polyprotein, capsid protein VP1; hand-foot-and-mouth disease, enterovirus uncoating, P factor, adaptor-sensor; HET: SPH; 2.30A {Human enterovirus 71} PDB: 3vbf_A* 3vbo_A 3vbs_A* 4aed_A* 3vbr_A 3vbu_A
Probab=28.72 E-value=81 Score=23.49 Aligned_cols=45 Identities=16% Similarity=0.270 Sum_probs=24.6
Q ss_pred hHHHHhcCCCCCceeEEEeeeee----cCCCCccccEEEEEEcCCCCCcch
Q 046281 53 YEDFTASLPADECRYAVYDFDFT----TDENCQKSKIFFVAWSPDTSRIRS 99 (133)
Q Consensus 53 ~~~~~~~l~~~~pry~~y~~~~~----~~~~~~~~~~vfI~w~Pd~a~vk~ 99 (133)
+.++.-+|. ---|.-+|++++ ...+....-.+-|.|+|.+||+-.
T Consensus 116 ~~QlRrKLe--~FTY~RfDlEvT~V~t~~~~~~~~~~~QvmyvPpGaP~p~ 164 (297)
T 3vbh_A 116 YAQMRRKVE--LFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPD 164 (297)
T ss_dssp SHHHHHHHT--TEEEEEEEEEEEEEEECTTSCCCCCEEEEEEECTTSCCCC
T ss_pred HHHHHhhhc--eeEEEeeeeEEEEEEecCCCCCCceEEEEEEcCCCCCCCC
Confidence 345555552 234555555543 112212234567999999999754
No 37
>1ncq_A Coat protein VP1; HRV, pleconaril, icosahedral virus; HET: W11; 2.50A {Human rhinovirus 14} SCOP: b.121.4.1 PDB: 1d3i_1* 1hrv_1* 1hri_1* 1na1_A* 1k5m_A* 1r08_1* 1r09_1* 1rvf_1 1vrh_1* 2hwb_1* 2hwc_1* 2r04_1* 2r06_1* 2r07_1* 2rm2_1* 2rr1_1* 2rs1_1* 2rs3_1* 2rs5_1* 4rhv_1 ...
Probab=27.11 E-value=88 Score=23.11 Aligned_cols=16 Identities=6% Similarity=0.073 Sum_probs=12.9
Q ss_pred cEEEEEEcCCCCCcch
Q 046281 84 KIFFVAWSPDTSRIRS 99 (133)
Q Consensus 84 ~~vfI~w~Pd~a~vk~ 99 (133)
-.+-|.|+|.+||+..
T Consensus 146 ~~~qvmyvPpGaP~p~ 161 (289)
T 1ncq_A 146 LVVQAMYVPPGAPNPK 161 (289)
T ss_dssp CEEEEEEECTTSCCCC
T ss_pred eEEEEEEeCCCCCCCc
Confidence 3456999999999764
No 38
>3gqq_A Protein UNC-119 homolog A; human retinal protein 4, HRG4, U119A_human, HR3066A, NESG, structural genomics, PSI-2, protein structure initiative; 1.95A {Homo sapiens} PDB: 3rbq_A*
Probab=25.54 E-value=1.3e+02 Score=20.96 Aligned_cols=49 Identities=24% Similarity=0.310 Sum_probs=23.8
Q ss_pred CceEEEEEEe-CCceEEEEeecCCC-CCChHHHHhcCCCCCceeEEEeeee
Q 046281 26 SYRFIVFKIE-EKIQQVTVEKLGEP-NESYEDFTASLPADECRYAVYDFDF 74 (133)
Q Consensus 26 ~~~~vi~~i~-~~~~~i~v~~~~~~-~~~~~~~~~~l~~~~pry~~y~~~~ 74 (133)
++.+.-|+|- .++.+|..+-..+. .....+....++++..|++-|.|+-
T Consensus 40 ~I~F~~F~IRD~etg~vLFei~k~~~~~~~~~~~~~~~~~~~R~vrYqF~~ 90 (195)
T 3gqq_A 40 KIDFVRFKIRDMDSGTVLFEIKKPPVSERLPINRRDLDPNAGRFVRYQFTP 90 (195)
T ss_dssp CCEEEEEEEEETTTCCEEEEEECCC--------------CTTCEEEEECCG
T ss_pred eeEEEEEEEeccCCCCEEEEecCCCCccccccccccCCccccceEEEEeCH
Confidence 3678888884 45555555433221 1122334566778899999998863
No 39
>1tme_1 Theiler'S murine encephalomyelitis virus (subunit VP1); icosahedral virus; 2.80A {Theiler} SCOP: b.121.4.1 PDB: 1tmf_1
Probab=25.44 E-value=78 Score=23.29 Aligned_cols=33 Identities=15% Similarity=0.301 Sum_probs=19.9
Q ss_pred eeEEEeeeeecCCCCccccEEEEEEcCCCCCcc
Q 046281 66 RYAVYDFDFTTDENCQKSKIFFVAWSPDTSRIR 98 (133)
Q Consensus 66 ry~~y~~~~~~~~~~~~~~~vfI~w~Pd~a~vk 98 (133)
-|..+|++.+-.......-.+-|.|+|.+|++.
T Consensus 121 TY~rfDLEvTvv~~~~~~~~~qvmyvPpGaP~p 153 (274)
T 1tme_1 121 TYYKCDLEVTVSALGTDTVASVLRWAPTGAPAD 153 (274)
T ss_dssp EEEEEEEEEEEEECSCSCCEEEEEEECTTCCCC
T ss_pred eEecccEEEEEEEcCCCCceEEEEEcCCCCCCC
Confidence 466666665422111112346799999999987
No 40
>4goj_C Protein UNC-119 homolog A; small G protein ARL, GDI-like solubilizing factors, cilia, S protein; HET: GNP; 2.10A {Homo sapiens} PDB: 4gok_G*
Probab=25.12 E-value=1.1e+02 Score=22.04 Aligned_cols=48 Identities=25% Similarity=0.342 Sum_probs=20.4
Q ss_pred CceEEEEEEe-CCceEEEEeecCCC-CCChHHHHhcCCCCCceeEEEeee
Q 046281 26 SYRFIVFKIE-EKIQQVTVEKLGEP-NESYEDFTASLPADECRYAVYDFD 73 (133)
Q Consensus 26 ~~~~vi~~i~-~~~~~i~v~~~~~~-~~~~~~~~~~l~~~~pry~~y~~~ 73 (133)
++.++-|+|- .++.++..+-..+. ..........++.+..||+-|.|.
T Consensus 85 ~I~F~~F~IRD~etg~vlFei~kp~~~~~~~~~~~~~d~~agR~VrY~F~ 134 (240)
T 4goj_C 85 KIDFVRFKIRDMDSGTVLFEIKKPPVSERLPINRRDLDPNAGRFVRYQFT 134 (240)
T ss_dssp CCEEEEEEEEETTTCCEEEEEEC------------------CCEEEEEEC
T ss_pred CcceeEEEEecCCCCeEEEEecCCCccccccccccccCcccCceEEEecC
Confidence 3788888884 44455544322221 222233345677788899988876
No 41
>1fmd_1 Foot-and-mouth disease virus (subunit VP1); icosahedral virus; 3.50A {Foot-and-mouth disease virus} SCOP: b.121.4.1 PDB: 1qgc_1 1qgc_5
Probab=23.75 E-value=64 Score=22.74 Aligned_cols=29 Identities=14% Similarity=0.410 Sum_probs=19.9
Q ss_pred ceeEEEeeeeecCCCCccccEEEEEEcCCCCCcch
Q 046281 65 CRYAVYDFDFTTDENCQKSKIFFVAWSPDTSRIRS 99 (133)
Q Consensus 65 pry~~y~~~~~~~~~~~~~~~vfI~w~Pd~a~vk~ 99 (133)
.-|..+|++.+-.. . .-|.|+|.+||+..
T Consensus 69 FTY~rfDlEvtvv~-----~-~qvmyvPpGaP~p~ 97 (208)
T 1fmd_1 69 ATYYFSDLEIAVTH-----T-GKLTWVPNGAPVSA 97 (208)
T ss_dssp EEEEEEEEEEEEEE-----E-EEEEEECTTCCGGG
T ss_pred cEEEeccEEEEEEE-----e-eEEEEECCCCCchh
Confidence 35666666665221 1 58999999999875
No 42
>1z7s_1 Human coxsackievirus A21; picornavirus, capsid protein, viral protein, icosahedral virus; HET: MYR G; 3.20A {Human coxsackievirus A21} PDB: 1z7z_1*
Probab=22.94 E-value=1.2e+02 Score=22.60 Aligned_cols=15 Identities=13% Similarity=0.339 Sum_probs=12.4
Q ss_pred EEEEEEcCCCCCcch
Q 046281 85 IFFVAWSPDTSRIRS 99 (133)
Q Consensus 85 ~vfI~w~Pd~a~vk~ 99 (133)
..-|.|+|.+||+..
T Consensus 149 ~~qvmyvPpGAP~p~ 163 (298)
T 1z7s_1 149 VYQIMYIPPGAPRPS 163 (298)
T ss_dssp EEEEEEECTTSCCCS
T ss_pred EEEEEEcCCCCCCCC
Confidence 457999999998875
No 43
>3fxt_A Nucleoside diphosphate-linked moiety X motif 6; nudix, NUDT6, GFG, FGF2AS, antisense basic fibroblast growth FGF-2 regulation, hydrolase; 2.30A {Homo sapiens}
Probab=22.85 E-value=64 Score=20.47 Aligned_cols=14 Identities=7% Similarity=0.257 Sum_probs=10.5
Q ss_pred cccEEEEEEcCCCC
Q 046281 82 KSKIFFVAWSPDTS 95 (133)
Q Consensus 82 ~~~~vfI~w~Pd~a 95 (133)
...++|..|.|++-
T Consensus 99 ~dylmL~~WLpe~p 112 (113)
T 3fxt_A 99 SDSSTLTLWLREGP 112 (113)
T ss_dssp BTEEEEEEECCC--
T ss_pred CCeEEEEEecCcCC
Confidence 45899999999863
No 44
>4a8x_B HOOK-like, isoform A; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Drosophila melanogaster}
Probab=21.40 E-value=22 Score=18.35 Aligned_cols=8 Identities=38% Similarity=0.762 Sum_probs=5.6
Q ss_pred EEEEcCCC
Q 046281 87 FVAWSPDT 94 (133)
Q Consensus 87 fI~w~Pd~ 94 (133)
-|||+|-+
T Consensus 22 ~IY~LPlt 29 (40)
T 4a8x_B 22 CIYWLPLT 29 (40)
T ss_dssp CCEEECCC
T ss_pred ceEEeECC
Confidence 47888853
No 45
>2mev_1 Mengo virus coat protein (subunit VP1); cardio picornavirus coat protein, icosahedral virus; 3.00A {Mengo virus} SCOP: b.121.4.1 PDB: 1mec_1
Probab=20.93 E-value=88 Score=23.03 Aligned_cols=33 Identities=18% Similarity=0.399 Sum_probs=19.1
Q ss_pred eeEEEeeeeecCCCCccccEEEEEEcCCCCCcc
Q 046281 66 RYAVYDFDFTTDENCQKSKIFFVAWSPDTSRIR 98 (133)
Q Consensus 66 ry~~y~~~~~~~~~~~~~~~vfI~w~Pd~a~vk 98 (133)
-|..+|++.+--......--.-|.|+|.+|++.
T Consensus 121 TY~rfDLEvtvv~~~~~~~~~~vmyvPpGaP~~ 153 (277)
T 2mev_1 121 VYYKCDLEVTLSPHTSGAHGLLVRWCPTGTPTK 153 (277)
T ss_dssp SEEEEEEEEEEEESCSSCCCEEEEEECTTSCCC
T ss_pred eEecccEEEEEEEcCCCCcceEEEECCCCCCCC
Confidence 466677666421111011123599999999986
Done!