Query 046289
Match_columns 243
No_of_seqs 126 out of 538
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 18:26:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046289.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046289hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1x6v_B Bifunctional 3'-phospho 100.0 8.6E-87 2.9E-91 658.3 27.5 235 3-238 333-625 (630)
2 1r6x_A ATP:sulfate adenylyltra 100.0 1.9E-83 6.5E-88 604.3 24.4 226 3-238 109-394 (395)
3 1g8f_A Sulfate adenylyltransfe 100.0 5.2E-77 1.8E-81 576.8 25.6 224 3-236 110-393 (511)
4 2gks_A Bifunctional SAT/APS ki 100.0 4.1E-74 1.4E-78 559.5 21.9 224 3-234 85-368 (546)
5 1v47_A ATP sulfurylase; produc 100.0 8.6E-73 3E-77 525.2 24.2 219 3-230 80-348 (349)
6 1jhd_A Sulfate adenylyltransfe 100.0 1.3E-71 4.4E-76 524.6 20.1 226 3-235 107-395 (396)
7 1m8p_A Sulfate adenylyltransfe 100.0 1.1E-69 3.8E-74 531.1 23.3 222 3-234 112-392 (573)
8 3cr8_A Sulfate adenylyltranfer 100.0 1.5E-65 5E-70 500.5 20.6 196 3-233 110-364 (552)
9 1od6_A PPAT, phosphopantethein 98.6 1.2E-07 4.3E-12 76.7 7.6 144 67-232 3-159 (160)
10 1qjc_A Phosphopantetheine aden 98.2 1.1E-05 3.8E-10 64.9 9.9 143 67-231 4-157 (158)
11 1kam_A Deamido-NAD(+), nicotin 98.1 0.00021 7.3E-09 59.6 16.3 148 67-230 10-189 (194)
12 1k4m_A NAMN adenylyltransferas 98.0 8.7E-05 3E-09 63.0 12.3 148 67-230 6-209 (213)
13 2qtr_A Nicotinate (nicotinamid 98.0 2.4E-05 8.3E-10 64.7 8.6 143 68-229 6-183 (189)
14 1ej2_A Nicotinamide mononucleo 97.9 0.00011 3.7E-09 61.0 11.1 140 67-230 6-160 (181)
15 1o6b_A Phosphopantetheine aden 97.8 0.00022 7.6E-09 58.1 11.4 142 67-230 5-157 (169)
16 3f3m_A Phosphopantetheine aden 97.5 0.00096 3.3E-08 55.4 11.8 135 70-232 9-160 (168)
17 3k9w_A Phosphopantetheine aden 97.5 0.0026 9E-08 53.7 14.0 144 65-234 23-181 (187)
18 1f9a_A Hypothetical protein MJ 97.4 0.0018 6.2E-08 52.9 11.4 136 68-230 4-154 (168)
19 1yum_A 'probable nicotinate-nu 97.2 0.0065 2.2E-07 52.9 13.5 146 68-229 27-226 (242)
20 3nv7_A Phosphopantetheine aden 97.2 0.00045 1.5E-08 56.9 5.5 134 68-229 6-156 (157)
21 4f3r_A Phosphopantetheine aden 97.1 0.0036 1.2E-07 51.6 10.3 136 67-231 8-160 (162)
22 2qjo_A Bifunctional NMN adenyl 97.1 0.00049 1.7E-08 61.1 5.4 142 67-231 10-172 (341)
23 2x0k_A Riboflavin biosynthesis 97.1 0.00071 2.4E-08 62.2 6.6 133 66-212 17-175 (338)
24 2b7l_A Glycerol-3-phosphate cy 97.1 0.0021 7.3E-08 50.1 8.4 113 66-213 3-131 (132)
25 3nd5_A Phosphopantetheine aden 97.0 0.0041 1.4E-07 51.8 10.1 133 70-230 8-158 (171)
26 3h05_A Uncharacterized protein 97.0 0.00085 2.9E-08 56.1 5.8 135 70-230 8-167 (177)
27 1vlh_A Phosphopantetheine aden 97.0 0.011 3.7E-07 48.7 12.5 135 70-232 18-169 (173)
28 2h29_A Probable nicotinate-nuc 96.9 0.0074 2.5E-07 50.0 10.2 146 68-230 6-184 (189)
29 2qjt_B Nicotinamide-nucleotide 96.8 0.0046 1.6E-07 55.2 8.7 142 71-233 14-179 (352)
30 3nbk_A Phosphopantetheine aden 96.6 0.014 4.7E-07 49.1 10.2 140 66-231 23-176 (177)
31 3op1_A Macrolide-efflux protei 96.4 0.018 6.2E-07 52.3 10.2 130 65-212 21-178 (308)
32 1coz_A Protein (glycerol-3-pho 95.6 0.044 1.5E-06 42.2 7.8 23 66-88 3-25 (129)
33 1mrz_A Riboflavin kinase/FMN a 95.0 0.064 2.2E-06 48.2 7.9 124 67-212 2-148 (293)
34 3gmi_A UPF0348 protein MJ0951; 94.9 0.18 6.1E-06 46.6 10.7 156 65-233 53-262 (357)
35 1nup_A FKSG76; NAD biosynthesi 88.3 0.29 1E-05 42.4 3.3 45 196-241 197-243 (252)
36 1kqn_A Nmnat, nicotinamide mon 88.1 0.28 9.4E-06 43.5 3.0 45 197-242 219-265 (279)
37 3elb_A Ethanolamine-phosphate 75.6 10 0.00035 34.5 8.4 78 65-165 8-103 (341)
38 3do8_A Phosphopantetheine aden 63.0 3.9 0.00013 32.6 2.4 21 70-90 6-26 (148)
39 3glv_A Lipopolysaccharide core 63.0 5.2 0.00018 31.2 3.2 118 65-212 3-139 (143)
40 1nup_A FKSG76; NAD biosynthesi 49.9 12 0.00042 32.0 3.5 66 67-139 9-90 (252)
41 1kqn_A Nmnat, nicotinamide mon 47.2 14 0.00047 32.4 3.5 67 67-140 11-93 (279)
42 2l9z_A PR domain zinc finger p 46.0 7.9 0.00027 24.7 1.2 21 176-196 11-33 (39)
43 1lw7_A Transcriptional regulat 42.8 11 0.00036 33.7 2.1 19 70-88 8-26 (365)
44 3rm1_A Protein S100-B; alpha-h 37.4 23 0.00078 24.9 2.8 41 198-242 27-69 (92)
45 4eto_A Protein S100-A4; calciu 36.2 15 0.00053 26.3 1.7 41 198-242 28-70 (93)
46 3nxa_A Protein S100-A16; S100 31.9 51 0.0017 23.9 4.0 41 198-242 30-72 (100)
47 3zwh_A Protein S100-A4; Ca-bin 30.5 48 0.0016 24.3 3.7 41 198-242 31-73 (104)
48 2kgr_A Intersectin-1; structur 27.2 39 0.0013 24.8 2.7 36 198-242 30-65 (111)
49 2h2k_A Protein S100-A13; calci 27.2 56 0.0019 24.0 3.6 38 198-242 40-79 (106)
50 1s6c_A KV4 potassium channel-i 26.9 26 0.0009 26.7 1.7 45 198-242 108-157 (183)
51 4drw_A Protein S100-A10/annexi 26.0 57 0.0019 24.9 3.5 41 198-242 30-72 (121)
52 2lv7_A Calcium-binding protein 25.6 51 0.0017 23.7 3.0 37 198-242 52-89 (100)
53 3hl4_A Choline-phosphate cytid 23.8 51 0.0018 28.5 3.1 115 65-211 77-212 (236)
54 3nso_A Protein S100-A3; EF-han 22.1 72 0.0025 23.3 3.3 41 198-242 28-70 (101)
55 1yx7_A Calsensin, LAN3-6 antig 21.2 1E+02 0.0036 20.0 3.8 44 198-242 23-66 (83)
56 2lnk_A Protein S100-A4; EF-han 20.0 90 0.0031 23.3 3.5 41 198-242 40-82 (113)
No 1
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=100.00 E-value=8.6e-87 Score=658.31 Aligned_cols=235 Identities=57% Similarity=0.987 Sum_probs=222.4
Q ss_pred ceEEEEEeccccCCCHHHHHHhhhCCCCCCChhHHHHHHhhCCeEEeeeeEEecccc-c---c---------------CC
Q 046289 3 LLFDVYFSIEIYKQPKEERIARTWRTTAPSLPYVDQAITYAGNWLIGGDLEVLEPIK-M---Q---------------AN 63 (243)
Q Consensus 3 ~~lAil~V~ei~~~dk~~~a~~vfGT~d~~HPgV~~~~~~~g~~~vgG~v~~l~~~~-~---~---------------~g 63 (243)
+++|+|+|+|+|++||++||++||||+|++||||++++. +|+|+|||+|++++++. + + +|
T Consensus 333 ~~~a~l~v~e~~~~dk~~~a~~v~gt~d~~HPgv~~~~~-~g~~~vgG~i~~l~~~~~~~~~~~~~~tP~e~r~~f~~~g 411 (630)
T 1x6v_B 333 RRVAILRNPEFFEHRKEERCARQWGTTCKNHPYIKMVME-QGDWLIGGDLQVLDRVYWNDGLDQYRLTPTELKQKFKDMN 411 (630)
T ss_dssp EEEEEEEEEEEEECCHHHHHHHHHSCCCTTSHHHHHHHH-SCSEEEEEEEEECSCCCCCSSCGGGCCCHHHHHHHHHHTT
T ss_pred eEEEEEEeeEEEecCHHHHHHHHhCCCCCCCcchHHHHh-CCCEEEEeEEEEEecCcccccchhhcCCHHHHHHHHHHcC
Confidence 689999999999999999999999999999999999765 69999999999999653 2 1 89
Q ss_pred CccEEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEeh-------------HHHHHHHHHHHHcCCCCCCcEEEeeC
Q 046289 64 VDAVFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILLH-------------YWRMKQHDKVLEDGVLDPETTVVSIF 130 (243)
Q Consensus 64 w~~VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll~-------------~~r~r~y~~~l~~~y~p~~~~~l~~l 130 (243)
|++|||||||||+|||||+||+.|++++.|.||+|++|||| ++||+||++++++||||+++++|++|
T Consensus 412 w~~VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll~pl~G~tk~~di~~~~r~~~~~~~~~~~y~p~~~~~l~~~ 491 (630)
T 1x6v_B 412 ADAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHPLGGWTKDDDVPLMWRMKQHAAVLEEGVLNPETTVVAIF 491 (630)
T ss_dssp CSEEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEEEEBCSCCCTTSCCHHHHHHHHHHHHHTTSSCGGGEEECCB
T ss_pred CCeEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEEEEeCcCCCCCCCCCHHHHHHHHHHHHHcCCCCCcceEEeec
Confidence 99999999999999999999999988778888899999999 99999999999978999999999999
Q ss_pred CCCcCCCCchHHHHHHHHHHhcCCcEeEecCCCCCCC------Cccc--------------------ccceeEEeCCCCe
Q 046289 131 PSPMHYAGPTEVQWHAKARINAGANFYIVGRDRAGMG------LESE--------------------YVKVAAYDKTQGK 184 (243)
Q Consensus 131 p~~mryAGPrEal~hAiirkN~GcTHfIvGrdHAG~g------~~~~--------------------~~~~~~Y~~~~~~ 184 (243)
|++|||||||||||||||||||||||||||||||||| +||+ +|++++||++|++
T Consensus 492 p~~mryaGPrEa~~hai~rkN~Gcth~IVGrdhAG~g~~~~~~~~Y~~~~aq~i~~~~~~~l~i~~~~~~~~~Y~~~~~~ 571 (630)
T 1x6v_B 492 PSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPAGMPHPETGKDLYEPSHGAKVLTMAPGLITLEIVPFRVAAYNKKKKR 571 (630)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTTCSEEEECSSTTCCBCTTTCSBSSCTTHHHHHHHHCTTCTTCEEEECCCEEEETTTTE
T ss_pred cchhhhcCcHHHHHHHHHHHhCCCCeEEECCCCCCCCCCCCccccCCcchHHHHHhcCcccCCceEEEcceeEEEcccCc
Confidence 9999999999999999999999999999999999999 8886 7899999999999
Q ss_pred EeeeCCCCCccccccCHHHHHHHHhCCCCCCCCCcChhHHHHHHHHHhhcCCCC
Q 046289 185 MAFFDPSRAQEFLFISGTKMRTLARNKENPPDGFMCPGGWKVLVEYYDSLAPAD 238 (243)
Q Consensus 185 ~~~~~~h~~~~~~~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~~~~~~~~~~ 238 (243)
|++..||+++++++||||+||+||++|+.||+||||||||+||+++|++.++.-
T Consensus 572 ~~~~~p~~~~~~~~isgt~~R~~l~~G~~pP~~f~rpev~~~l~~~~~~~~~~~ 625 (630)
T 1x6v_B 572 MDYYDSEHHEDFEFISGTRMRKLAREGQKPPEGFMAPKAWTVLTEYYKSLEKAH 625 (630)
T ss_dssp EEECCSTTGGGEECCCHHHHHHHHHTTCCCCTTSSCHHHHHHHHHHHHHHCC--
T ss_pred eeccCCCCCceeeecCHHHHHHHHHCCCCCCcccCcHHHHHHHHHhccCccccc
Confidence 999999999999999999999999999999999999999999999999987653
No 2
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=100.00 E-value=1.9e-83 Score=604.32 Aligned_cols=226 Identities=27% Similarity=0.422 Sum_probs=202.3
Q ss_pred ceEEEEEeccccCCCHHHHHHhhhCCCCCCChhHHHHHHhhCCeEEeeeeEEecccc-cc-----------------CCC
Q 046289 3 LLFDVYFSIEIYKQPKEERIARTWRTTAPSLPYVDQAITYAGNWLIGGDLEVLEPIK-MQ-----------------ANV 64 (243)
Q Consensus 3 ~~lAil~V~ei~~~dk~~~a~~vfGT~d~~HPgV~~~~~~~g~~~vgG~v~~l~~~~-~~-----------------~gw 64 (243)
+++|+|+|+|+|++||++||++||| +|++||||++++.+.|+|+|||+|++++++. ++ +||
T Consensus 109 ~~~ail~v~e~y~~dk~~~a~~vfg-~d~~HPgV~~~~~~~g~~~vgG~v~~l~~~~~~df~~~r~tP~e~R~~f~~~gw 187 (395)
T 1r6x_A 109 IPIAILTVQDVYKPNKTIEAEKVFR-GDPEHPAISYLFNVAGDYYVGGSLEAIQLPQHYDYPGLRKTPAQLRLEFQSRQW 187 (395)
T ss_dssp EEEEEEEEEEEECCCHHHHHHHHHC-SCTTSHHHHHHHHTSCSEEEEEEEEESCCCCCCSSTTCSCCHHHHHHHHHHTTC
T ss_pred ceEEEEEeeeeeccChHHHHHHHhC-CCcCCccHHHHHhhcCCEEEEEEEEEEecCCcCCchhhcCCHHHHHHHHHhcCC
Confidence 6899999999999999999999999 9999999999876569999999999999653 21 899
Q ss_pred ccEEEeecCCCCcchH-HHHHHHHHHHHHhcCCCCCeEEeh-------------HHHHHHHHHHHHcCCCCCCcEEEeeC
Q 046289 65 DAVFAFQRRKPVHNGH-ALLMTDTRRRLLDMGCQNPIILLH-------------YWRMKQHDKVLEDGVLDPETTVVSIF 130 (243)
Q Consensus 65 ~~VvafQTrnPlHraH-e~l~~~~~~~~~e~~~~~~~lll~-------------~~r~r~y~~~l~~~y~p~~~~~l~~l 130 (243)
++|||||||||+|||| |++++ + |+|. +++|||| ++|++||+++++ +| |+++++|++|
T Consensus 188 ~~VvafqtrNP~HraH~e~~~r-~---a~e~---~~~lllhPlvG~tK~~Dip~~vR~~~~~~~l~-~y-p~~~v~l~~~ 258 (395)
T 1r6x_A 188 DRVVAFQTRNPMHRAHRELTVR-A---AREA---NAKVLIHPVVGLTKPGDIDHHTRVRVYQEIIK-RY-PNGIAFLSLL 258 (395)
T ss_dssp CCEEEECCSSCCCHHHHHHHHH-H---HHHT---TCEEEECCBCSBCCTTCCCHHHHHHHHHHHGG-GS-STTCEEECCB
T ss_pred CcEEEeccCCCcchhhHHHHHH-H---HHHc---CCcEEEEECCCCCCCCCCCHHHHHHHHHHHHH-hC-CCccEEEEec
Confidence 9999999999999999 55555 3 4554 4889888 999999999999 45 9999999999
Q ss_pred CCCcCCCCchHHHHHHHHHHhcCCcEeEecCCCCCCC------Cccc--------------------ccceeEEeCCCCe
Q 046289 131 PSPMHYAGPTEVQWHAKARINAGANFYIVGRDRAGMG------LESE--------------------YVKVAAYDKTQGK 184 (243)
Q Consensus 131 p~~mryAGPrEal~hAiirkN~GcTHfIvGrdHAG~g------~~~~--------------------~~~~~~Y~~~~~~ 184 (243)
|++|||||||||||||||||||||||||||||||||| +||+ +|++++||++|++
T Consensus 259 p~~mryAGPrEai~HAiiRkN~GcthfIVGRDhAG~g~~~~~~d~Y~~~~aq~i~~~~~~el~I~~v~f~~~~Y~~~~~~ 338 (395)
T 1r6x_A 259 PLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQELVESYKHELDIEVVPFRMVTYLPDEDR 338 (395)
T ss_dssp CCBCCCCHHHHHHHHHHHHHHTTCSEEEECTTTTCCCBCTTSCBSSCTTHHHHHHHHHHHHHTCEEEECCCEEEEGGGTE
T ss_pred chhhhhcCcHHHHHHHHHHHHcCCceEEECCCCCCCCCCCcccccCCcchHHHHHHhchhccCceEEEecceEEecccCe
Confidence 9999999999999999999999999999999999999 8886 7899999999999
Q ss_pred Eeee--CCCCCccccccCHHHHHHHHhCCCCCCCCCcChhHHHHHHHHHhhcCCCC
Q 046289 185 MAFF--DPSRAQEFLFISGTKMRTLARNKENPPDGFMCPGGWKVLVEYYDSLAPAD 238 (243)
Q Consensus 185 ~~~~--~~h~~~~~~~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~~~~~~~~~~ 238 (243)
|++. |||+++++++||||+||+||++|+.||+|||||||++||+++|++..++|
T Consensus 339 ~~~~~~~p~~~~~~~~iSGT~~R~~L~~G~~pP~~f~rpeV~~iL~~~~~~r~~qg 394 (395)
T 1r6x_A 339 YAPIDQIDTTKTRTLNISGTELRRRLRVGGEIPEWFSYPEVVKILRESNPPRPKGS 394 (395)
T ss_dssp EEETTTSCSSSCCCBCCCHHHHHHHHHHTCCCCTTTSCHHHHHHHTTC--------
T ss_pred EEEcccCCCCccceEccCHHHHHHHHHCcCCCCcccCCHHHHHHHHHhcCChhhcC
Confidence 9995 99999999999999999999999999999999999999999999988876
No 3
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=100.00 E-value=5.2e-77 Score=576.84 Aligned_cols=224 Identities=28% Similarity=0.424 Sum_probs=205.8
Q ss_pred ceEEEEEeccccCCCHHHHHHhhhCCCCCCChhHHHHHHhhCCeEEeeeeEEeccccc-c-----------------CCC
Q 046289 3 LLFDVYFSIEIYKQPKEERIARTWRTTAPSLPYVDQAITYAGNWLIGGDLEVLEPIKM-Q-----------------ANV 64 (243)
Q Consensus 3 ~~lAil~V~ei~~~dk~~~a~~vfGT~d~~HPgV~~~~~~~g~~~vgG~v~~l~~~~~-~-----------------~gw 64 (243)
+++|+|+|+|+|++||++||++||| +|++||||++++.+.|+|+|||+|++++++.+ + +||
T Consensus 110 ~~~a~l~v~e~~~~dk~~~~~~v~g-~d~~HPgv~~~~~~~g~~~v~G~v~~l~~~~~~~~~~~~~tP~e~r~~f~~~gw 188 (511)
T 1g8f_A 110 IPIAILTVQDVYKPNKTIEAERVFR-GDPEHPAISYLFNVAGDYYVGGSLEAIQLPQHYDYPGLRKTPAQLRLEFQSRQW 188 (511)
T ss_dssp EEEEEEEEEEEECCCHHHHHHHHHC-SCTTSHHHHHHHHTSCSEEEEEEEEESCCCCCCSCTTTCCCHHHHHHHHHHTTC
T ss_pred ceEEEEEeeeeeccChHHHHHHHhC-CCcCCccHHHHHhhCCCEEEEEEEEEEecCCcCCchhhcCCHHHHHHHHHHcCC
Confidence 6899999999999999999999999 99999999998765599999999999986532 1 899
Q ss_pred ccEEEeecCCCCcchH-HHHHHHHHHHHHhcCCCCCeEEeh-------------HHHHHHHHHHHHcCCCCCCcEEEeeC
Q 046289 65 DAVFAFQRRKPVHNGH-ALLMTDTRRRLLDMGCQNPIILLH-------------YWRMKQHDKVLEDGVLDPETTVVSIF 130 (243)
Q Consensus 65 ~~VvafQTrnPlHraH-e~l~~~~~~~~~e~~~~~~~lll~-------------~~r~r~y~~~l~~~y~p~~~~~l~~l 130 (243)
++|+|||||||+|||| |++++. ++|. +++|||| ++|++||+++++ +| |+++++|+++
T Consensus 189 ~~v~afqtrnP~HraH~e~~~~~----a~e~---~~~lll~pl~g~~k~~di~~~~r~~~~~~~~~-~y-p~~~~~l~~~ 259 (511)
T 1g8f_A 189 DRVVAFQTRNPMHRAHRELTVRA----AREA---NAKVLIHPVVGLTKPGDIDHHTRVRVYQEIIK-RY-PNGIAFLSLL 259 (511)
T ss_dssp CCEEEEEESSCCCHHHHHHHHHH----HHHH---TCEEEEEEBCSBCSTTCCCHHHHHHHHHHHGG-GS-CTTSEEECCB
T ss_pred CcEEEEecCCCCchHHHHHHHHH----HHHc---CCcEEEEECCCCCCCCCCCHHHHHHHHHHHHH-hC-CcccEEEEec
Confidence 9999999999999999 666553 3454 4888888 999999999999 55 9999999999
Q ss_pred CCCcCCCCchHHHHHHHHHHhcCCcEeEecCCCCCCC------Cccc--------------------ccceeEEeCCCCe
Q 046289 131 PSPMHYAGPTEVQWHAKARINAGANFYIVGRDRAGMG------LESE--------------------YVKVAAYDKTQGK 184 (243)
Q Consensus 131 p~~mryAGPrEal~hAiirkN~GcTHfIvGrdHAG~g------~~~~--------------------~~~~~~Y~~~~~~ 184 (243)
|++|||||||||+||||+||||||||||||||||||| +||+ +|++++||++|++
T Consensus 260 p~~m~yaGprea~~hai~r~n~G~th~IvGrdhAg~g~~~~~~~~Y~~~~aq~i~~~~~~~l~i~pv~fd~~~y~~~~g~ 339 (511)
T 1g8f_A 260 PLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQELVESYKHELDIEVVPFRMVTYLPDEDR 339 (511)
T ss_dssp CCBCCCCHHHHHHHHHHHHHHTTCSEEECCTTTTCCCBCTTSCBSSCTTHHHHHHHHTHHHHCSEEECCCCEEEEGGGTE
T ss_pred chhhhccCcHHHHHHHHHHHhCCCceEEeCCCCCCCCCCCcccccCCcchHHHHHHhCccccCceEEeecceeEecccCe
Confidence 9999999999999999999999999999999999999 8886 6899999999999
Q ss_pred Eeee--CCCCCccccccCHHHHHHHHhCCCCCCCCCcChhHHHHHHHHHhhcCC
Q 046289 185 MAFF--DPSRAQEFLFISGTKMRTLARNKENPPDGFMCPGGWKVLVEYYDSLAP 236 (243)
Q Consensus 185 ~~~~--~~h~~~~~~~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~~~~~~~~ 236 (243)
|++. |||+++++++||||+||++|++|+.||+|||||||+++|+++|++..+
T Consensus 340 ~i~~d~~p~~~~~~~~iSgt~IR~~Lr~G~~~P~~f~rpeV~~vLr~~~~~~~~ 393 (511)
T 1g8f_A 340 YAPIDQIDTTKTRTLNISGTELRRRLRVGGEIPEWFSYPEVVKILRESNPPRPK 393 (511)
T ss_dssp EEEGGGCSSSCCCCBCCCHHHHHHHHHHTCCCCTTTSCHHHHHHHHHHSCCGGG
T ss_pred EEEcccCCCCcccccccCHHHHHHHHhCCCCCCccccChhhHHHHHHhcccccc
Confidence 9996 999999999999999999999999999999999999999999976544
No 4
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=100.00 E-value=4.1e-74 Score=559.54 Aligned_cols=224 Identities=29% Similarity=0.434 Sum_probs=193.2
Q ss_pred ceEEEEEeccccCCCHHHHHHhhhCCCCCCChhHHHHHHhhCCeEEeeeeEEeccccc-c-----------------CCC
Q 046289 3 LLFDVYFSIEIYKQPKEERIARTWRTTAPSLPYVDQAITYAGNWLIGGDLEVLEPIKM-Q-----------------ANV 64 (243)
Q Consensus 3 ~~lAil~V~ei~~~dk~~~a~~vfGT~d~~HPgV~~~~~~~g~~~vgG~v~~l~~~~~-~-----------------~gw 64 (243)
+++|+|+|+|+|++||++||++||||+|++||||++++. +|+|+|||+|++++++.+ + +||
T Consensus 85 ~~~a~l~v~e~~~~dk~~~~~~v~gt~~~~hp~v~~~~~-~g~~~~~G~~~~l~~~~~~~~~~~~~tp~e~r~~~~~~gw 163 (546)
T 2gks_A 85 VPLAIMRVEEVYKWNLEYEAKNVLGTTDPRHPLVAEMHT-WGEYYISGELKVIQLPKYYDFPEYRKTPKQVREEIKSLGL 163 (546)
T ss_dssp CEEEEEECCEEEECCHHHHHHHHHSCCCTTSHHHHHHTT-SCSEEEECCEEESCCCCCCSCGGGBCCHHHHHHHHHHHTC
T ss_pred eeEEEEEeceeecCCHHHHHHHHhCCCCCCCcchHHHhh-cCCEEEEEEEEEeecCCcCCcHhhcCCHHHHHHHHHHcCC
Confidence 689999999999999999999999999999999999764 699999999999996532 1 899
Q ss_pred ccEEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEeh-------------HHHHHHHHHHHHcCCCCCCcEEEeeCC
Q 046289 65 DAVFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILLH-------------YWRMKQHDKVLEDGVLDPETTVVSIFP 131 (243)
Q Consensus 65 ~~VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll~-------------~~r~r~y~~~l~~~y~p~~~~~l~~lp 131 (243)
++|+|||||||+|||||+||+.|++ +. ++.|||| ++|++||+++++ +|||+++++++++|
T Consensus 164 ~~v~afqtrnP~Hr~H~~l~~~a~~---~~---~~~llv~p~~g~~k~~di~~~~R~~~~~~~~~-~~~p~~~v~~~~~p 236 (546)
T 2gks_A 164 DKIVAFQTRNPMHRVHEELTKRAME---KV---GGGLLLHPVVGLTKPGDVDVYTRMRIYKVLYE-KYYDKKKTILAFLP 236 (546)
T ss_dssp SCEEEECCSSCCCHHHHHHHHHHHH---HH---TSEEEECCBCSBCCTTSCCHHHHHHHHHHHHH-HHSCTTTEEECBBC
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHH---hc---CCcEEEEeCcCCCCCCCCCHHHHHHHHHHHHH-hcCCCCcEEEeecC
Confidence 9999999999999999999886643 33 4788887 999999999999 89999999999999
Q ss_pred CCcCCCCchHHHHHHHHHHhcCCcEeEecCCCCCCC------Cccc--------------------ccceeEEeCCCCeE
Q 046289 132 SPMHYAGPTEVQWHAKARINAGANFYIVGRDRAGMG------LESE--------------------YVKVAAYDKTQGKM 185 (243)
Q Consensus 132 ~~mryAGPrEal~hAiirkN~GcTHfIvGrdHAG~g------~~~~--------------------~~~~~~Y~~~~~~~ 185 (243)
++|||||||||+|||||||||||||||||||||||| +||+ +|++++||++|++|
T Consensus 237 ~~m~~agprea~~ha~ir~n~G~th~ivgrdhag~g~~~~~~~~Y~~~~a~~~~~~~~~~lgi~~v~fd~~~y~~~~g~~ 316 (546)
T 2gks_A 237 LAMRMAGPREALWHGIIRRNYGATHFIVGRDHASPGKDSKGKPFYDPYEAQELFKKYEDEIGIKMVPFEELVYVPELDQY 316 (546)
T ss_dssp CBCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCCBCTTSCBSSCTTHHHHHHHHHHHHHTCEEEECCCCEEETTTTEE
T ss_pred chhhccCchHHHHHHHHHHhCCCCeEEECCCCCCCCCCCCCcccCCcchHHHHHHhcccccCceEEeccceEEEcCCCeE
Confidence 999999999999999999999999999999999999 4774 78999999999999
Q ss_pred eee--CCCCCccccccCHHHHHHH-HhCCCCCCCCCcChhHHHHHHHHHhhc
Q 046289 186 AFF--DPSRAQEFLFISGTKMRTL-ARNKENPPDGFMCPGGWKVLVEYYDSL 234 (243)
Q Consensus 186 ~~~--~~h~~~~~~~iSgt~iR~~-L~~G~~pP~~f~rpeV~~vl~~~~~~~ 234 (243)
++. |||+++++.+||||+||++ |++|+.||+||+||||+++|+++|++.
T Consensus 317 i~id~~~~~~~~~~~iSgt~iR~~~L~~g~~~p~~~~r~eV~~~lr~~~~~~ 368 (546)
T 2gks_A 317 VEINEAKKRNLKYINISGTEIRENFLKQGRKLPEWFTRPEVAEILAETYVPK 368 (546)
T ss_dssp ECSCC---------------CTHHHHTTTCCCCTTTSCHHHHHHHHHHSCCG
T ss_pred EeeeccCCCCceeeecchhhhhhhhhcCCCCCCccccchhHHHHHHHhhccc
Confidence 986 7887778999999999999 999999999999999999999999654
No 5
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=100.00 E-value=8.6e-73 Score=525.17 Aligned_cols=219 Identities=27% Similarity=0.353 Sum_probs=202.6
Q ss_pred ceEEEEEeccccCCCHHHHHHhhhCCCCCCChhHHHHHHhhCCeEEeeeeEEecccccc---------------CCCccE
Q 046289 3 LLFDVYFSIEIYKQPKEERIARTWRTTAPSLPYVDQAITYAGNWLIGGDLEVLEPIKMQ---------------ANVDAV 67 (243)
Q Consensus 3 ~~lAil~V~ei~~~dk~~~a~~vfGT~d~~HPgV~~~~~~~g~~~vgG~v~~l~~~~~~---------------~gw~~V 67 (243)
+++|+|+|+|+|++||++||++||||+|++||||++++ +.|+|+|||+|++++...++ +||++|
T Consensus 80 ~~~a~l~v~e~~~~dk~~~~~~v~gt~d~~HPgv~~~~-~~g~~~vgG~v~~l~~~~f~~~~~tP~e~r~~f~~~gw~~V 158 (349)
T 1v47_A 80 ERVALLHVAEAYELDLEALARAVFGTDSETHPGVARLY-GKGPYALAGRVEVLKPRPRTPLEKTPEEVRAFFRQRGWRKV 158 (349)
T ss_dssp EEEEEEECCEEEECCHHHHHHHHHSCCCTTSHHHHHHH-HTCSEEEEBCEEESSCCCCCTTCCCHHHHHHHHHHTTCCSE
T ss_pred eeEEEEEeeeeeccCHHHHHHHHhCCCCcCCcchHHHh-hcCCEEEEEEEEEEEcCCchhhcCCHHHHHHHHHhcCCCeE
Confidence 68999999999999999999999999999999999976 57999999999999822221 999999
Q ss_pred EEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEeh-------------HHHHHHHHHHHHcCCCCCCcEEEeeCCCCc
Q 046289 68 FAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILLH-------------YWRMKQHDKVLEDGVLDPETTVVSIFPSPM 134 (243)
Q Consensus 68 vafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll~-------------~~r~r~y~~~l~~~y~p~~~~~l~~lp~~m 134 (243)
+|||||||+||||++|++.+ ++.. |.|++| ++|++||+++++ +|||+++++++++|++|
T Consensus 159 vafqTrNPiHrgH~~l~~~a----le~~---d~vll~P~~g~~K~~d~~~~~R~~~~~~~i~-~~~p~~~~~l~~~p~~m 230 (349)
T 1v47_A 159 VAFQTRNAPHRAHEYLIRLG----LELA---DGVLVHPILGAKKPDDFPTEVIVEAYQALIR-DFLPQERVAFFGLATPM 230 (349)
T ss_dssp EEEEESSCCCHHHHHHHHHH----HHHS---SEEEEEEBCSCCCTTSCCHHHHHHHHHHHHH-HHSCGGGEEECCBCSCC
T ss_pred EEeecCCCCchHHHHHHHHH----HHhC---CcEEEEECCCCCCCCCCCHHHHHHHHHHHHh-hcCCCcceEEEechHHh
Confidence 99999999999999998865 3432 788876 999999999999 78999999999999999
Q ss_pred CCCCchHHHHHHHHHHhcCCcEeEecCCCCCCCCccc-------------------ccceeEEeCCCCeEeee--CCC-C
Q 046289 135 HYAGPTEVQWHAKARINAGANFYIVGRDRAGMGLESE-------------------YVKVAAYDKTQGKMAFF--DPS-R 192 (243)
Q Consensus 135 ryAGPrEal~hAiirkN~GcTHfIvGrdHAG~g~~~~-------------------~~~~~~Y~~~~~~~~~~--~~h-~ 192 (243)
||||||||+||||+|||||||||||||||||+|+||+ +|+.++||++|++|++. ||| +
T Consensus 231 ~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~i~~~~~~l~i~~v~~~~~~Y~~~~~~~~~~~~~p~~~ 310 (349)
T 1v47_A 231 RYAGPKEAVFHALVRKNFGATHFLVGRDHAGVGDFYDPYAAHRIFDRLPPLGIEIVKVGAVFHCPLCGGIASERTCPEGH 310 (349)
T ss_dssp CCCTHHHHHHHHHHHHHTTCSEEEECTTTTCSTTCSCTTHHHHGGGGSCCCSSEEEECCCEEEETTTTEEEETTTSCGGG
T ss_pred hcCCcHHHHHHHHHHHcCCCcEEEECcCCCCcccccCcccHHHHHHhhhhcCceEEeccccEEcccCCceEEccccCccC
Confidence 9999999999999999999999999999999999975 56789999999999985 999 8
Q ss_pred CccccccCHHHHHHHHhCCCCCCCCCcChhHHHHHHHH
Q 046289 193 AQEFLFISGTKMRTLARNKENPPDGFMCPGGWKVLVEY 230 (243)
Q Consensus 193 ~~~~~~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~~ 230 (243)
++++++||||+||++|++|+.||+|||+|||+++|+++
T Consensus 311 ~~~~~~ISgT~iR~~L~~G~~pp~~f~~peV~~~I~~~ 348 (349)
T 1v47_A 311 REKRTAISMTKVRALLREGKAPPSELVRPELLPILRRG 348 (349)
T ss_dssp GGGCEECCHHHHHHHHHTTCCCCTTTSCGGGHHHHHTT
T ss_pred CCcccccCHHHHHHHHHCcCCCchhcCCHHHHHHHHhh
Confidence 88999999999999999999999999999999999975
No 6
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=100.00 E-value=1.3e-71 Score=524.56 Aligned_cols=226 Identities=29% Similarity=0.388 Sum_probs=206.9
Q ss_pred ceEEEEEeccccCCCHHHHHH------hhhCCCCCCChhHHHHHHhhCCeEEeeeeEEecccc----cc-----------
Q 046289 3 LLFDVYFSIEIYKQPKEERIA------RTWRTTAPSLPYVDQAITYAGNWLIGGDLEVLEPIK----MQ----------- 61 (243)
Q Consensus 3 ~~lAil~V~ei~~~dk~~~a~------~vfGT~d~~HPgV~~~~~~~g~~~vgG~v~~l~~~~----~~----------- 61 (243)
+++|+|+|+|+|++||++||+ +||||+|++||||++++ +.|+|+|||+|++++++. ++
T Consensus 107 ~~~a~l~v~e~~~~dk~~~a~~~~~~~~v~gt~d~~HPgv~~~~-~~g~~~vgG~v~~l~~~~~~~~~~~~~~tP~e~R~ 185 (396)
T 1jhd_A 107 EGNPVLAVMDIEAIEEVSDEQMAVMTDKVYRTTDMDHIGVKTFN-SQGRVAVSGPIQVLNFSYFQADFPDTFRTAVEIRN 185 (396)
T ss_dssp TTCCEEEEEECCEEEECCHHHHHHHHHHHHSCCCTTSHHHHHHT-TSCSEEEEEEEEECCCHHHHHHCTTTBCCHHHHHH
T ss_pred ceEEEEEeeeeeccChHHHhhhhcccccEECCCCCCCcchHHHh-hcCCEEEEEEEEEEecccccccchhhcCCHHHHHH
Confidence 578999999999999999999 99999999999999975 689999999999999642 21
Q ss_pred ----CCCccEEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEeh-------------HHHHHHHHHHHHcCCCCCCc
Q 046289 62 ----ANVDAVFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILLH-------------YWRMKQHDKVLEDGVLDPET 124 (243)
Q Consensus 62 ----~gw~~VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll~-------------~~r~r~y~~~l~~~y~p~~~ 124 (243)
+||++|+|||||||+||||++|++.|++.+ + .|.|+|| ++|++||+++++ +|||+++
T Consensus 186 ~f~~~gw~~VvafqTrNPiHrgH~~l~~~Ale~~---~--~D~vll~P~~g~~K~~di~~~~R~~~~~~~~~-~~~p~~~ 259 (396)
T 1jhd_A 186 EIKEHGWSKVVAFQTRNPMHRAHEELCRMAMESL---D--ADGVVVHMLLGKLKKGDIPAPVRDAAIRTMAE-VYFPPNT 259 (396)
T ss_dssp HHHHHTCSSEEEEEESSCCCHHHHHHHHHHHHHH---T--CSEEEEEEEECCCCTTCCCHHHHHHHHHHHHH-HHSCTTC
T ss_pred HHHhcCCceEEEeccCCCCchHHHHHHHHHHHHc---C--CCeEEEEECCCCCCCCCCCHHHHHHHHHHHHH-hcCCCcc
Confidence 899999999999999999999999765432 1 2566665 999999999999 7999999
Q ss_pred EEEeeCCCCcCCCCchHHHHHHHHHHhcCCcEeEecCCCCCCCCccc----------------------ccceeEEeCCC
Q 046289 125 TVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDRAGMGLESE----------------------YVKVAAYDKTQ 182 (243)
Q Consensus 125 ~~l~~lp~~mryAGPrEal~hAiirkN~GcTHfIvGrdHAG~g~~~~----------------------~~~~~~Y~~~~ 182 (243)
++++++|++||||||||++||||+|||||||||||||||||+|+||+ +|+.++||++|
T Consensus 260 v~l~~~p~~m~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~il~~~~~~~~l~i~iv~~~~~~Y~~~~ 339 (396)
T 1jhd_A 260 VMVTGYGFDMLYAGPREAVLHAYFRQNMGATHFIIGRDHAGVGDYYGAFDAQTIFDDEVPEGAMEIEIFRADHTAYSKKL 339 (396)
T ss_dssp EEEEEEECCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCTTCSCTTHHHHHHHHTSCTTSCSCEEEECCCEEEETTT
T ss_pred eEEEechHHhhcCCchHHHHHHHHHHcCCCcEEEECCCCCCccccCCcchHHHHHHhcccccccceeEEecccceecCCC
Confidence 99999999999999999999999999999999999999999999874 34679999999
Q ss_pred CeEeee--CCCC-CccccccCHHHHHHHHhCCCCCCCCCcChhHHHHHHHHHhhcC
Q 046289 183 GKMAFF--DPSR-AQEFLFISGTKMRTLARNKENPPDGFMCPGGWKVLVEYYDSLA 235 (243)
Q Consensus 183 ~~~~~~--~~h~-~~~~~~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~~~~~~~ 235 (243)
++|++. |||+ ++++++||||+||++|++|+.||+|||+|||+++|+++|++++
T Consensus 340 ~~~~~~~~~p~~~~~~~~~ISgT~IR~~L~~G~~pP~~f~~peV~~~I~~~~~~~~ 395 (396)
T 1jhd_A 340 NKIVMMRDVPDHTKEDFVLLSGTKVREMLGQGIAPPPEFSRPEVAKILMDYYQSIN 395 (396)
T ss_dssp TEEEEGGGCTTCCGGGEECCCHHHHHHHHHTTCCCCTTTCCHHHHHHHHHHHHHHH
T ss_pred CeEEEccccCcccCCCccccCHHHHHHHHHCCCCCCcccCCHHHHHHHHHhhcccC
Confidence 999985 9997 8899999999999999999999999999999999999999864
No 7
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=100.00 E-value=1.1e-69 Score=531.13 Aligned_cols=222 Identities=26% Similarity=0.378 Sum_probs=203.4
Q ss_pred ceEEEEEeccccCCCHHHHHHhhhCCCCCCChhHHHHHHhhCCeEEeeeeEEecccc-cc-----------------CCC
Q 046289 3 LLFDVYFSIEIYKQPKEERIARTWRTTAPSLPYVDQAITYAGNWLIGGDLEVLEPIK-MQ-----------------ANV 64 (243)
Q Consensus 3 ~~lAil~V~ei~~~dk~~~a~~vfGT~d~~HPgV~~~~~~~g~~~vgG~v~~l~~~~-~~-----------------~gw 64 (243)
+++|+|+|+|+|++||++||++||| +|++||||++++.+.|+|+|||+|++++++. ++ +||
T Consensus 112 ~~~a~l~v~e~~~~dk~~~~~~v~g-~~~~hP~v~~~~~~~g~~~v~G~~~~l~~~~~~~~~~~~~tp~e~r~~~~~~gw 190 (573)
T 1m8p_A 112 RNLAILTIDDIYRPDKTKEAKLVFG-GDPEHPAIVYLNNTVKEFYIGGKIEAVNKLNHYDYVALRYTPAELRVHFDKLGW 190 (573)
T ss_dssp EEEEEEEESCCCCCCHHHHHHHTSC-CCSSTHHHHHHHHTSCSEECCEEEEECCCCCCCSCGGGBCCHHHHHHHHHHTTC
T ss_pred eEEEEEEeeeeecCCHHHHHHHHhC-CCCCCccHHHHHhccCCEEEEEEEEEEecCCccCcHhhcCCHHHHHHHHHHcCC
Confidence 6899999999999999999999999 9999999999876559999999999999653 21 899
Q ss_pred ccEEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEeh-------------HHHHHHHHHHHHcCCCCCCcEEEeeCC
Q 046289 65 DAVFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILLH-------------YWRMKQHDKVLEDGVLDPETTVVSIFP 131 (243)
Q Consensus 65 ~~VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll~-------------~~r~r~y~~~l~~~y~p~~~~~l~~lp 131 (243)
++|+|||||||+|||||+|++.|+ .+. ++.|||| ++|++||+++++ +| |+++++++++|
T Consensus 191 ~~v~afqtrnP~Hr~H~~l~~~a~---~~~---~~~llv~pl~g~~k~~di~~~~R~~~~~~~~~-~~-p~~~v~l~~~p 262 (573)
T 1m8p_A 191 SRVVAFQTRNPMHRAHRELTVRAA---RSR---QANVLIHPVVGLTKPGDIDHFTRVRAYQALLP-RY-PNGMAVLGLLG 262 (573)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHH---HHT---TCEEEECCBCCCCCTTCHHHHHHHHHHHHHGG-GS-STTSEEECBBC
T ss_pred CeEEEEeeCCCcchhhHHHHHHHH---Hhc---CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHH-hC-CCCcEEEEecC
Confidence 999999999999999999988653 333 4788887 999999999999 44 99999999999
Q ss_pred CCcCCCCchHHHHHHHHHHhcCCcEeEecCCCCCCC------Cccc--------------------ccceeEEeCCCCeE
Q 046289 132 SPMHYAGPTEVQWHAKARINAGANFYIVGRDRAGMG------LESE--------------------YVKVAAYDKTQGKM 185 (243)
Q Consensus 132 ~~mryAGPrEal~hAiirkN~GcTHfIvGrdHAG~g------~~~~--------------------~~~~~~Y~~~~~~~ 185 (243)
++|||||||||+|||||||||||||||||||||||| +||+ +|++++||++|++|
T Consensus 263 ~~m~~agprea~~ha~ir~n~G~th~ivgrdhag~g~~~~~~~~Y~~~~a~~i~~~~~~~l~i~~v~fd~~~y~~~~g~~ 342 (573)
T 1m8p_A 263 LAMRMGGPREAIWHAIIRKNHGATHFIVGRDHAGPGSNSKGEDFYGPYDAQHAVEKYKDELGIEVVEFQMVTYLPDTDEY 342 (573)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHTCSEEEECTTTTCCCCCTTCCCSSCTTHHHHHHHHHHHHHCCEEEECCCCCBBTTTTBC
T ss_pred chhhccCchHHHHHHHHHHHCCCCeEEECCCCCCCCCCCCCcccCCcchHHHHHHhhhhhcCceeEeccceEEEcCCCcE
Confidence 999999999999999999999999999999999999 5775 78999999999999
Q ss_pred eee--CCCCCccccccCHHHHHHHHhCCCCCCCCCcChhHHHHHHHHHhhc
Q 046289 186 AFF--DPSRAQEFLFISGTKMRTLARNKENPPDGFMCPGGWKVLVEYYDSL 234 (243)
Q Consensus 186 ~~~--~~h~~~~~~~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~~~~~~ 234 (243)
++. ||| +.++..||||+||++|++|..+|.||++|+|++++++++++.
T Consensus 343 i~id~~~~-~~~~~~iSgt~ir~~l~~g~~~p~w~~~~eVsr~lRe~~~~~ 392 (573)
T 1m8p_A 343 RPVDQVPA-GVKTLNISGTELRRRLRSGAHIPEWFSYPEVVKILRESNPPR 392 (573)
T ss_dssp CCSSSSCT-TSCCBCCCHHHHHHHHHHTCCCCTTTSCHHHHHHHHTTSCCT
T ss_pred EecccCCC-CceeecCChHHHHHHHhccCCCCcccccccccHHHHHhcccc
Confidence 986 888 777899999999999999999999999999999999999654
No 8
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=100.00 E-value=1.5e-65 Score=500.51 Aligned_cols=196 Identities=17% Similarity=0.256 Sum_probs=169.9
Q ss_pred ceEEEEEeccccCCCHHHHHHhhhCCCCCCChhHHHHHHhhCCeEEeeeeEEeccc-ccc-----------------CCC
Q 046289 3 LLFDVYFSIEIYKQPKEERIARTWRTTAPSLPYVDQAITYAGNWLIGGDLEVLEPI-KMQ-----------------ANV 64 (243)
Q Consensus 3 ~~lAil~V~ei~~~dk~~~a~~vfGT~d~~HPgV~~~~~~~g~~~vgG~v~~l~~~-~~~-----------------~gw 64 (243)
+++|+|+|+|+|++| |+|+|||+|++++++ +++ +||
T Consensus 110 ~~~a~l~v~e~~~~d--------------------------g~~~v~G~v~~~~~~~~~~~~~~~~tp~e~r~~~~~~gw 163 (552)
T 3cr8_A 110 YMLAILTLSDVWKDG--------------------------ERWHLAGEVEGAALPPHPDFVSLRATPAELRALFVRRGW 163 (552)
T ss_dssp CEEEEEEEEEEEEET--------------------------TEEEEEEEEEESCCCCCCTTTTTBCCHHHHHHHHHHTTC
T ss_pred cEEEEEEEEEEEeeC--------------------------CCEEEEEEEEEEecCCcCCchhhcCCHHHHHHHHHhcCC
Confidence 689999999999987 999999999999965 221 899
Q ss_pred ccEEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEeh-------------HHHHHHHHHHHHcCCCCCCcEEEeeCC
Q 046289 65 DAVFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILLH-------------YWRMKQHDKVLEDGVLDPETTVVSIFP 131 (243)
Q Consensus 65 ~~VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll~-------------~~r~r~y~~~l~~~y~p~~~~~l~~lp 131 (243)
++|||||||||+|||||++++.| +.+. +++|||| ++||+||+++++ +| |+++++|++||
T Consensus 164 ~~v~afqtrnp~Hrah~~~~~~~---~~~~---~~~lll~pl~g~~k~~d~~~~~r~~~~~~~~~-~~-p~~~~~l~~~p 235 (552)
T 3cr8_A 164 RRIIAWQARQPMHRAQYEFCLKS---AIEN---EANLLLHPQVGGDITEAPAYFGLVRSFLAIRD-RF-PAATTQLSLLP 235 (552)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHH---HHHT---TCEEEECCBCCCCTTTCTTHHHHHHHHHHHGG-GS-CGGGEEECBBC
T ss_pred CceEEEecCCCCchHHHHHHHHH---HHhc---CCeEEEEeccCCCCCCCCCHHHHHHHHHHHHH-hC-CCccEEEeecc
Confidence 99999999999999999998865 3455 3889888 999999999999 55 99999999999
Q ss_pred CCcCCCCchHHHHHHHHHHhcCCcEeEecCCCCCCC------Cccc--------------------ccceeEEeCCCCeE
Q 046289 132 SPMHYAGPTEVQWHAKARINAGANFYIVGRDRAGMG------LESE--------------------YVKVAAYDKTQGKM 185 (243)
Q Consensus 132 ~~mryAGPrEal~hAiirkN~GcTHfIvGrdHAG~g------~~~~--------------------~~~~~~Y~~~~~~~ 185 (243)
++|||||||||+|||||||||||||||||||||||| +||+ +|++++||++|++|
T Consensus 236 ~~m~~agprea~~ha~~r~n~G~th~ivGrdhag~g~~~~~~~~Y~~~~a~~i~~~~~~~l~i~pv~f~~~~y~~~~g~~ 315 (552)
T 3cr8_A 236 APPPEASGRALLLRAIVARNFGCSLLIAGGEHQPDGGDCRRGEDLTQNRVDPSVAERAEKIGVRLIAYPRMVYVEDRAEH 315 (552)
T ss_dssp SCCCCSCSHHHHHHHHHHHHHTCSEEEC----------------------CCSSHHHHHHHTCEEECCCCEEEEGGGTEE
T ss_pred hhhcccCcHHHHHHHHHHHhCCCCeeeeCCCCCCCCCCCCccccCCcchHHHHHHhhhhhcCCeeeeccceEEecCCCeE
Confidence 999999999999999999999999999999999999 8886 78999999999999
Q ss_pred eee--CCCCCccccccCHHHHHHHHhCCCCCCCCCcChhHHHHHHHHHhh
Q 046289 186 AFF--DPSRAQEFLFISGTKMRTLARNKENPPDGFMCPGGWKVLVEYYDS 233 (243)
Q Consensus 186 ~~~--~~h~~~~~~~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~~~~~ 233 (243)
++. ||| ++++..||||+||++|++|+.||.||++|+|+++++++++.
T Consensus 316 ~~~d~~~~-~~~~~~isgt~ir~~Lr~G~~~p~~f~~peV~~vLR~~~~~ 364 (552)
T 3cr8_A 316 LPEAEAPQ-GARLLTLSGEEFQRRMRAGLKIPEWYSFPEVLAELHRQTPP 364 (552)
T ss_dssp EEGGGSCT-TCCEECCCHHHHHHHHTTTCCCCTTTSCHHHHHHHHHHSCC
T ss_pred EecccCCC-CcccccCCHHHHHHHHhcCCCCCccccccchhhhhhhhccc
Confidence 996 999 58899999999999999999999999999999999998854
No 9
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=98.57 E-value=1.2e-07 Score=76.70 Aligned_cols=144 Identities=17% Similarity=0.212 Sum_probs=85.7
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHhcCC----CCCe----EEeh-HHHHHHHHHHHHcCCCCCCcEEEeeCCCCcCCC
Q 046289 67 VFAFQRRKPVHNGHALLMTDTRRRLLDMGC----QNPI----ILLH-YWRMKQHDKVLEDGVLDPETTVVSIFPSPMHYA 137 (243)
Q Consensus 67 VvafQTrnPlHraHe~l~~~~~~~~~e~~~----~~~~----lll~-~~r~r~y~~~l~~~y~p~~~~~l~~lp~~mryA 137 (243)
++..=|-||+|+||..|++.|...+ |... .+|. -+.. +-|++-.+..+. + + +.+.+..+.
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~-d~v~v~~~~~p~k~~~~~~~~~~R~~ml~~a~~-~-~--~~v~v~~~e------ 71 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLF-EKVTVAVLENPSKRGQYLFSAEERLAIIREATA-H-L--ANVEAATFS------ 71 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHS-SEEEEEEECC-----CCSSCHHHHHHHHHHHTT-T-C--TTEEEEEEC------
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHC-CEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHhc-C-C--CCEEEEecC------
Confidence 3445678999999999988765443 3210 0110 0111 778888887665 2 2 355555454
Q ss_pred CchHHHHHHHHHHhcCCcEeEecCCCCCCCCcccccceeEEeCC----CCeEeeeCCCCCccccccCHHHHHHHHhCCCC
Q 046289 138 GPTEVQWHAKARINAGANFYIVGRDRAGMGLESEYVKVAAYDKT----QGKMAFFDPSRAQEFLFISGTKMRTLARNKEN 213 (243)
Q Consensus 138 GPrEal~hAiirkN~GcTHfIvGrdHAG~g~~~~~~~~~~Y~~~----~~~~~~~~~h~~~~~~~iSgt~iR~~L~~G~~ 213 (243)
| .+-..+ +.+++.+||+|-|.. +++........|+.. ...+...+ ......||+|.||+++++|..
T Consensus 72 ~----~~~~~l-~~l~~~~~v~G~d~~--~~~~~~~~~~~~~r~~~~~~~~i~~~~---~~~~~~ISST~IR~~l~~G~~ 141 (160)
T 1od6_A 72 G----LLVDFV-RRVGAQAIVKGLRAV--SDYEYELQMAHLNRQLYPGLETLFILA---ATRYSFVSSTMVKEIARYGGD 141 (160)
T ss_dssp S----CHHHHH-HHTTCSEEEEEECTT--SCHHHHHHHHHHHHHHTTTCEEEEEEC---CGGGTTCCHHHHHHHHHTTCC
T ss_pred c----hHHHHH-HHcCCCEEEEeCCcc--cchHHHHHHHHhCcCCCCCCCEEEEeC---CCCCCcccHHHHHHHHHcCCC
Confidence 2 222233 779999999998843 332211111122221 11121121 112346999999999999986
Q ss_pred CCCCCcChhHHHHHHHHHh
Q 046289 214 PPDGFMCPGGWKVLVEYYD 232 (243)
Q Consensus 214 pP~~f~rpeV~~vl~~~~~ 232 (243)
...+..|+|.+.|.+.|+
T Consensus 142 -~~~~vP~~V~~~I~~~~~ 159 (160)
T 1od6_A 142 -VSKLVPPATLRALKAKLG 159 (160)
T ss_dssp -CTTTSCHHHHHHHHHHTT
T ss_pred -hhHHCCHHHHHHHHHHhc
Confidence 457999999999998874
No 10
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=98.17 E-value=1.1e-05 Score=64.86 Aligned_cols=143 Identities=19% Similarity=0.209 Sum_probs=82.4
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHhcCC----CCCe--EEeh-HHHHHHHHHHHHcCCCCCCcEEEeeCCCCcCCCCc
Q 046289 67 VFAFQRRKPVHNGHALLMTDTRRRLLDMGC----QNPI--ILLH-YWRMKQHDKVLEDGVLDPETTVVSIFPSPMHYAGP 139 (243)
Q Consensus 67 VvafQTrnPlHraHe~l~~~~~~~~~e~~~----~~~~--lll~-~~r~r~y~~~l~~~y~p~~~~~l~~lp~~mryAGP 139 (243)
++..=|-||+|+||..|++.+.+.+ |... .+|. -+.. +-|++-.+..+. + + +.+.+..+. +
T Consensus 4 ~i~~GsFDpvH~GH~~l~~~a~~~~-d~v~v~~~~~p~k~~~~~~~~R~~ml~~a~~-~-~--~~v~v~~~~------~- 71 (158)
T 1qjc_A 4 AIYPGTFDPITNGHIDIVTRATQMF-DHVILAIAASPSKKPMFTLEERVALAQQATA-H-L--GNVEVVGFS------D- 71 (158)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHTTS-SEEEEEEESCCSSCCSSCHHHHHHHHHHHTT-T-C--TTEEEEEEC------S-
T ss_pred EEEEecCCCCCHHHHHHHHHHHHhC-CEEEEEECCCCCCCCCCCHHHHHHHHHHHHh-c-C--CCeEEcccc------h-
Confidence 3445689999999999988653322 2100 0000 0011 789888887666 2 3 355555444 1
Q ss_pred hHHHHHHHHHHhcCCcEeEecCCCCCCCCcccccceeEEeC----CCCeEeeeCCCCCccccccCHHHHHHHHhCCCCCC
Q 046289 140 TEVQWHAKARINAGANFYIVGRDRAGMGLESEYVKVAAYDK----TQGKMAFFDPSRAQEFLFISGTKMRTLARNKENPP 215 (243)
Q Consensus 140 rEal~hAiirkN~GcTHfIvGrdHAG~g~~~~~~~~~~Y~~----~~~~~~~~~~h~~~~~~~iSgt~iR~~L~~G~~pP 215 (243)
.+-..+ +.+++++||+|-|... ++........+++ .... +...+ ......||+|.||+++++|.. .
T Consensus 72 ---~~~~~l-~~l~~~~~v~G~d~~~--~~~~~~~~~~~~r~~~~~~~~-i~~~~--~~~~~~iSST~IR~~i~~g~~-~ 141 (158)
T 1qjc_A 72 ---LMANFA-RNQHATVLIRGLRAVA--DFEYEMQLAHMNRHLMPELES-VFLMP--SKEWSFISSSLVKEVARHQGD-V 141 (158)
T ss_dssp ---CHHHHH-HHTTCCEEEEECCTTC--CHHHHHHHHHHHHHHCTTSEE-EEECC--CGGGTTCCHHHHHHHHHTTCC-C
T ss_pred ---HHHHHH-HHcCCCEEEEeccchh--hhHHHHHHHHhCccCCCCCCE-EEEEC--CCCCCccCHHHHHHHHHcCCC-h
Confidence 122333 6779999999987532 2111111001111 1112 22211 112246999999999999986 4
Q ss_pred CCCcChhHHHHHHHHH
Q 046289 216 DGFMCPGGWKVLVEYY 231 (243)
Q Consensus 216 ~~f~rpeV~~vl~~~~ 231 (243)
+.+..|+|++.|.+.+
T Consensus 142 ~~~vP~~V~~yI~~~~ 157 (158)
T 1qjc_A 142 THFLPENVHQALMAKL 157 (158)
T ss_dssp GGGSCHHHHHHHHHHH
T ss_pred hHhCCHHHHHHHHHhh
Confidence 5789999999998765
No 11
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=98.07 E-value=0.00021 Score=59.64 Aligned_cols=148 Identities=16% Similarity=0.140 Sum_probs=88.9
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEe--h--------------HHHHHHHHHHHHcCCCCCCcEEEeeC
Q 046289 67 VFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILL--H--------------YWRMKQHDKVLEDGVLDPETTVVSIF 130 (243)
Q Consensus 67 VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll--~--------------~~r~r~y~~~l~~~y~p~~~~~l~~l 130 (243)
++..=|-||+|+||..|++.|...+ + .+.+++ . +-|++-.+.+++ + + +.+. +.
T Consensus 10 ~v~~GsFdp~H~GH~~l~~~a~~~~---~--~d~v~~~~~~~~~~k~~~~~~~~~~R~~ml~~a~~-~-~--~~v~--v~ 78 (194)
T 1kam_A 10 GIFGGTFDPPHNGHLLMANEVLYQA---G--LDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQ-S-N--PSFK--LE 78 (194)
T ss_dssp EEEEECCSSCCHHHHHHHHHHHHHT---T--CSEEEEEECCCC---------CHHHHHHHHHHHHT-T-C--TTEE--EC
T ss_pred EEEEeccccccHHHHHHHHHHHHHh---C--CCEEEEEECCCCCCcCCcCCCCHHHHHHHHHHHHc-C-C--CCeE--Ee
Confidence 4446889999999999988764432 1 122211 1 778888887776 2 3 3333 45
Q ss_pred CCCcCCCCchHHH-HHHHHHHhcCCc--EeEecCCCC-CCCCccc------ccceeEEeCCCC------eEeeeCCCCCc
Q 046289 131 PSPMHYAGPTEVQ-WHAKARINAGAN--FYIVGRDRA-GMGLESE------YVKVAAYDKTQG------KMAFFDPSRAQ 194 (243)
Q Consensus 131 p~~mryAGPrEal-~hAiirkN~GcT--HfIvGrdHA-G~g~~~~------~~~~~~Y~~~~~------~~~~~~~h~~~ 194 (243)
+.....+||.=.+ .-.-+++.|.-+ .||+|-|.. +...+++ .+...++..... ++... +..
T Consensus 79 ~~e~~~~~~~~t~~~l~~l~~~~p~~~~~~v~G~D~~~~~~~W~~~e~i~~~~~~~v~~R~g~~~~l~~~i~~~-~~~-- 155 (194)
T 1kam_A 79 LVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFA-DVP-- 155 (194)
T ss_dssp CGGGSTTCCCSHHHHHHHHHHHSTTSEEEEEEETTTTTTCCCCHHHHHHHHHSEEEEEECSSCCCCCSSCCEEE-ECC--
T ss_pred HHHhcCCCCCChHHHHHHHHHHCCCCcEEEEEecchhhhhccccCHHHHHHhCcEEEEECCCcchhcCCCEEEe-CCC--
Confidence 6677777763221 122344455444 899999974 5444432 122233433221 11111 111
Q ss_pred cccccCHHHHHHHHhCCCCCCCCCcChhHHHHHHHH
Q 046289 195 EFLFISGTKMRTLARNKENPPDGFMCPGGWKVLVEY 230 (243)
Q Consensus 195 ~~~~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~~ 230 (243)
...||+|.||+++++|.. -..+..++|.+.|.+.
T Consensus 156 -~~~ISST~IR~~i~~g~~-~~~lvP~~V~~yI~~~ 189 (194)
T 1kam_A 156 -EFEVSSTMIRERFKSKKP-TDYLIPDKVKKYVEEN 189 (194)
T ss_dssp -CBCCCHHHHHHHHHHTCC-CTTTSCHHHHHHHHHT
T ss_pred -CCCcCHHHHHHHHHcCCC-chhhCCHHHHHHHHHc
Confidence 247999999999999987 4568899999988763
No 12
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=97.97 E-value=8.7e-05 Score=63.03 Aligned_cols=148 Identities=16% Similarity=0.162 Sum_probs=89.0
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHH-HhcCCCCCeEEeh-------------HHHHHHHHHHHHcCCCCCCcEEEeeCCC
Q 046289 67 VFAFQRRKPVHNGHALLMTDTRRRL-LDMGCQNPIILLH-------------YWRMKQHDKVLEDGVLDPETTVVSIFPS 132 (243)
Q Consensus 67 VvafQTrnPlHraHe~l~~~~~~~~-~e~~~~~~~lll~-------------~~r~r~y~~~l~~~y~p~~~~~l~~lp~ 132 (243)
++..=|-||+|+||..|++.+...+ +|.. .+.++ +-|++-.+..++ + . +.+. +.+.
T Consensus 6 ~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v----~~~~~~~~~~k~~~~~~~~~R~~ml~~a~~-~-~--~~v~--v~~~ 75 (213)
T 1k4m_A 6 ALFGGTFDPVHYGHLKPVETLANLIGLTRV----TIIPNNVPPHRPQPEANSVQRKHMLELAIA-D-K--PLFT--LDER 75 (213)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHTCSCE----EEEECSSCTTSCCCSSCHHHHHHHHHHHHT-T-C--TTEE--ECCH
T ss_pred EEEEeCcCCCCHHHHHHHHHHHHHcCCCEE----EEEECCCCCCCCCCCCCHHHHHHHHHHHhc-c-C--CCEE--EeHH
Confidence 3446789999999999998765543 0110 11111 789998887776 2 2 3343 3556
Q ss_pred CcCCCCch--HHHHHHHHHHhcCCc---EeEecCCCCC-CCCccc---c---cceeEEeCC-------------------
Q 046289 133 PMHYAGPT--EVQWHAKARINAGAN---FYIVGRDRAG-MGLESE---Y---VKVAAYDKT------------------- 181 (243)
Q Consensus 133 ~mryAGPr--Eal~hAiirkN~GcT---HfIvGrdHAG-~g~~~~---~---~~~~~Y~~~------------------- 181 (243)
....+||. .-.+.. +++.||++ .||+|-|..- ...+++ . .+-.++...
T Consensus 76 e~~~~~~s~t~~~l~~-l~~~~~~~~~~~~i~G~D~~~~l~~W~~~~~i~~~~~~vv~~R~~~~~~~~~~~~~~~~~~~~ 154 (213)
T 1k4m_A 76 ELKRNAPSYTAQTLKE-WRQEQGPDVPLAFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHL 154 (213)
T ss_dssp HHHCSSCCCHHHHHHH-HHHHHCTTSCEEEEEEHHHHHHGGGSTTHHHHHHHCEEEEECCTTCCSSCSSHHHHHHHHHHB
T ss_pred HhcCCCCCcHHHHHHH-HHHHhCCCCcEEEEEehhhhhhhhccCCHHHHHhhCcEEEEECCCCchhhhhhHHHHHHhhhh
Confidence 65566653 333433 77888998 8999987431 111121 0 011111111
Q ss_pred -----------CCeEeeeCCCCCccccccCHHHHHHHHhCCCCCCCCCcChhHHHHHHHH
Q 046289 182 -----------QGKMAFFDPSRAQEFLFISGTKMRTLARNKENPPDGFMCPGGWKVLVEY 230 (243)
Q Consensus 182 -----------~~~~~~~~~h~~~~~~~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~~ 230 (243)
.+++... +. ....||+|.||+++++|.. ...+..|+|.+.|.+.
T Consensus 155 ~~~~~~l~~~~~~~i~~~-~~---~~~~iSST~IR~~i~~g~~-i~~lvP~~V~~yI~~~ 209 (213)
T 1k4m_A 155 THNPEDLHLQPAGKIYLA-ET---PWFNISATIIRERLQNGES-CEDLLPEPVLTYINQQ 209 (213)
T ss_dssp CSCTTHHHHSSSCCEEEE-CC---CCCCCCHHHHHHHHHTTCC-CTTTSCHHHHHHHHHH
T ss_pred cchhhhhhhccCCeEEEE-eC---CcccCCHHHHHHHHHcCCC-chhcCCHHHHHHHHHc
Confidence 1112111 11 1367999999999999987 5678999999988763
No 13
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=97.97 E-value=2.4e-05 Score=64.71 Aligned_cols=143 Identities=14% Similarity=0.104 Sum_probs=84.9
Q ss_pred EEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEE--eh--------------HHHHHHHHHHHHcCCCCCCcEEEeeCC
Q 046289 68 FAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIIL--LH--------------YWRMKQHDKVLEDGVLDPETTVVSIFP 131 (243)
Q Consensus 68 vafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~ll--l~--------------~~r~r~y~~~l~~~y~p~~~~~l~~lp 131 (243)
+..=|-||+|+||..|++.+...+ + .+.++ ++ +-|++-.+.+++ + . +.+ .+.+
T Consensus 6 i~~GsFDPvH~GH~~li~~a~~~~---~--~d~v~~~~~~~~~~k~~~~~~~~~~R~~ml~~~~~-~-~--~~v--~v~~ 74 (189)
T 2qtr_A 6 IIGGTFDPPHYGHLLIANEVYHAL---N--LEEVWFLPNQIPPHKQGRNITSVESRLQMLELATE-A-E--EHF--SICL 74 (189)
T ss_dssp EEEECCSSCCHHHHC-CHHHHHHT---T--CSEEEEEECSSCTTCTTSCCCCHHHHHHHHHHHHT-T-C--TTE--EECC
T ss_pred EEecCcccccHHHHHHHHHHHHHc---C--CCEEEEEECCCCCCccCCCCCCHHHHHHHHHHHhC-C-C--CCE--EEeh
Confidence 345789999999999988664432 1 12221 11 789988887776 2 2 343 3467
Q ss_pred CCcCCCCchHHHHHHHHHHhcCCcE------eEecCCCC-CCCCccc-----ccceeEEeCCCC-------eEeeeCCCC
Q 046289 132 SPMHYAGPTEVQWHAKARINAGANF------YIVGRDRA-GMGLESE-----YVKVAAYDKTQG-------KMAFFDPSR 192 (243)
Q Consensus 132 ~~mryAGPrEal~hAiirkN~GcTH------fIvGrdHA-G~g~~~~-----~~~~~~Y~~~~~-------~~~~~~~h~ 192 (243)
.....+||.=.+ . .+ +.+++.+ ||+|-|.. |....++ ..-.++..++.+ ++... +.
T Consensus 75 ~e~~~~~~~~~~-~-~l-~~l~~~~p~~~~~~v~G~D~~~~~~~w~~~~~l~~~~~~~v~~r~~~~~~~~~~v~~~-~~- 149 (189)
T 2qtr_A 75 EELSRKGPSYTY-D-TM-LQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTV-EI- 149 (189)
T ss_dssp TGGGSCSCCCHH-H-HH-HHHHHHCTTCEEEEEEEHHHHHHGGGSTTHHHHTTTCEEEEECCTTCCCCCSSCCEEE-CC-
T ss_pred HHhcCCCCCCHH-H-HH-HHHHHHCCCCCEEEEEehhhhhhhhccCCHHHHHHhCCEEEEECCCCCccCCceEEEE-cC-
Confidence 777778775221 2 12 4455556 99999863 2222221 111233333322 22222 11
Q ss_pred CccccccCHHHHHHHHhCCCCCCCCCcChhHHHHHHH
Q 046289 193 AQEFLFISGTKMRTLARNKENPPDGFMCPGGWKVLVE 229 (243)
Q Consensus 193 ~~~~~~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~ 229 (243)
....||+|.||+++++|..+ ..+..|+|.+.|.+
T Consensus 150 --~~~~iSST~IR~~l~~g~~~-~~lvP~~V~~yI~~ 183 (189)
T 2qtr_A 150 --PEFAVSSSLLRERYKEKKTC-KYLLPEKVQVYIER 183 (189)
T ss_dssp --CCCCCCHHHHHHHHHTTCCC-TTTSCHHHHHHHHH
T ss_pred --CCCccCHHHHHHHHHcCCCc-hhcCCHHHHHHHHH
Confidence 12379999999999999874 56789999998876
No 14
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=97.89 E-value=0.00011 Score=61.03 Aligned_cols=140 Identities=14% Similarity=0.105 Sum_probs=84.6
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEe-h-------------HHHHHHHHHHHHcCCCCCCcEEEeeCCC
Q 046289 67 VFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILL-H-------------YWRMKQHDKVLEDGVLDPETTVVSIFPS 132 (243)
Q Consensus 67 VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll-~-------------~~r~r~y~~~l~~~y~p~~~~~l~~lp~ 132 (243)
++..=|-||+|+||..|++.|... .+. -.+++ . +-|++-.+..+.+.-++.+.+.+..+.
T Consensus 6 ~i~~G~Fdp~H~GH~~l~~~a~~~-~d~----v~v~v~~~~~p~~~~~~~~~~~R~~~~~~a~~~~~~~~~~v~v~~~d- 79 (181)
T 1ej2_A 6 GLLVGRMQPFHRGHLQVIKSILEE-VDE----LIICIGSAQLSHSIRDPFTAGERVMMLTKALSENGIPASRYYIIPVQ- 79 (181)
T ss_dssp EEEEECCTTCCHHHHHHHHHHTTT-CSE----EEEEECSTTCCSSSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEECC-
T ss_pred EEEEEEcCCcCHHHHHHHHHHHHh-CCe----eEEEECCCCCCcCCCCCCCHHHHHHHHHHHHhhCCCCCCcEEEEecC-
Confidence 445578999999999998755322 111 11122 1 788888887776221223455444333
Q ss_pred CcCCCCchHHHHHHHHHH-hcCCcEeEecCCCCCCCCcccccceeEEeCCCCeEeeeCCCCCccccccCHHHHHHHHhCC
Q 046289 133 PMHYAGPTEVQWHAKARI-NAGANFYIVGRDRAGMGLESEYVKVAAYDKTQGKMAFFDPSRAQEFLFISGTKMRTLARNK 211 (243)
Q Consensus 133 ~mryAGPrEal~hAiirk-N~GcTHfIvGrdHAG~g~~~~~~~~~~Y~~~~~~~~~~~~h~~~~~~~iSgt~iR~~L~~G 211 (243)
..+ ....|+..+++ ..+|+.+++|||.. ...++. ..-..+. .|. .+...||+|.||+++++|
T Consensus 80 -~~~---~~~~w~~~~~~l~~~~~~~v~gr~~~-----~~~~~~-----~~i~~~~-~~~--~~~~~ISST~IR~~l~~G 142 (181)
T 1ej2_A 80 -DIE---CNALWVGHIKMLTPPFDRVYSGNPLV-----QRLFSE-----DGYEVTA-PPL--FYRDRYSGTEVRRRMLDD 142 (181)
T ss_dssp -CCS---CHHHHHHHHHHHSCCCSEEECCCHHH-----HHHHHH-----TTCCEEC-CCC--SSTTTSSHHHHHHHHHHT
T ss_pred -ccC---CHHHHHHHHHHHCCCCCEEEECCHHH-----HHHHHh-----CCeEEEe-cCC--CccCcCcHHHHHHHHHcC
Confidence 333 24578887665 45899999999851 101110 0001111 221 122359999999999999
Q ss_pred CCCCCCCcChhHHHHHHHH
Q 046289 212 ENPPDGFMCPGGWKVLVEY 230 (243)
Q Consensus 212 ~~pP~~f~rpeV~~vl~~~ 230 (243)
..+ ..+..++|.+.|.+.
T Consensus 143 ~~i-~~lvP~~V~~yI~~~ 160 (181)
T 1ej2_A 143 GDW-RSLLPESVVEVIDEI 160 (181)
T ss_dssp CCC-GGGSCHHHHHHHHHT
T ss_pred CCh-hHhCCHHHHHHHHHc
Confidence 864 578999999998765
No 15
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=97.80 E-value=0.00022 Score=58.10 Aligned_cols=142 Identities=13% Similarity=0.107 Sum_probs=81.5
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHhcC----CCCCe--EEeh-HHHHHHHHHHHHcCCCCCCcEEEeeCCCCcCCCCc
Q 046289 67 VFAFQRRKPVHNGHALLMTDTRRRLLDMG----CQNPI--ILLH-YWRMKQHDKVLEDGVLDPETTVVSIFPSPMHYAGP 139 (243)
Q Consensus 67 VvafQTrnPlHraHe~l~~~~~~~~~e~~----~~~~~--lll~-~~r~r~y~~~l~~~y~p~~~~~l~~lp~~mryAGP 139 (243)
++..=|-||+|+||..|++.|.+.+ |.. +.+|. -+.. +-|++-.+..+. + + +.+.+..+. +-
T Consensus 5 ~i~~GsFDpvH~GH~~li~~a~~~~-d~v~v~~~~~p~k~~l~~~~~R~~ml~~a~~-~-~--~~v~v~~~e------~~ 73 (169)
T 1o6b_A 5 AVCPGSFDPVTYGHLDIIKRGAHIF-EQVYVCVLNNSSKKPLFSVEERCELLREVTK-D-I--PNITVETSQ------GL 73 (169)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHS-SEEEEEECCCCSSCCSSCHHHHHHHHHHHHT-T-C--TTEEEEECS------SC
T ss_pred EEEEEeeCCCCHHHHHHHHHHHHhC-CEEEEEECCCCccCCCCCHHHHHHHHHHHHh-c-C--CCEEEcccc------hH
Confidence 4445789999999999988765443 321 00110 0111 788888887665 2 2 345554444 11
Q ss_pred hHHHHHHHHHHhcCCcEeEecCCCCCCCCcccccceeEEeC----CCCeEeeeCCCCCccccccCHHHHHHHHhCCCCCC
Q 046289 140 TEVQWHAKARINAGANFYIVGRDRAGMGLESEYVKVAAYDK----TQGKMAFFDPSRAQEFLFISGTKMRTLARNKENPP 215 (243)
Q Consensus 140 rEal~hAiirkN~GcTHfIvGrdHAG~g~~~~~~~~~~Y~~----~~~~~~~~~~h~~~~~~~iSgt~iR~~L~~G~~pP 215 (243)
+.. . -+.+++..||+|-|... .+...+....+.. ....+... + ......||+|.||++|++|..+.
T Consensus 74 ---~~~-~-l~~l~~~~~i~G~d~~~--~~~~~~~~~~~~r~~~~~~~~i~~~-~--~~~~~~ISST~IR~~l~~G~~~~ 143 (169)
T 1o6b_A 74 ---LID-Y-ARRKNAKAILRGLRAVS--DFEYEMQGTSVNRVLDESIETFFMM-A--NNQYSFLSSSIVKEVARYDGSVS 143 (169)
T ss_dssp ---HHH-H-HHHTTCSEEEEEECSGG--GHHHHHHHHHHHHHHCTTSEEEEEE-C--CSTTTTCCHHHHHHHHHTTCCCT
T ss_pred ---HHH-H-HHHcCCCEEEEcCcccc--chHHHHHHHHHhccccCCCCEEEEE-C--CCCCCcCcHHHHHHHHHcCCChh
Confidence 122 1 26789999999998642 1110111001111 11112111 1 11223699999999999998754
Q ss_pred CCCcChhHHHHHHHH
Q 046289 216 DGFMCPGGWKVLVEY 230 (243)
Q Consensus 216 ~~f~rpeV~~vl~~~ 230 (243)
.+..|+|.+.|.+.
T Consensus 144 -~~vP~~V~~yi~~~ 157 (169)
T 1o6b_A 144 -EFVPPEVELALQQK 157 (169)
T ss_dssp -TTSCHHHHHHHHHH
T ss_pred -HHCCHHHHHHHHHh
Confidence 57889999999875
No 16
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=97.55 E-value=0.00096 Score=55.45 Aligned_cols=135 Identities=18% Similarity=0.178 Sum_probs=80.6
Q ss_pred eecCCCCcchHHHHHHHHHHHHHhcCCCCCeEE--eh-----------HHHHHHHHHHHHcCCCCCCcEEEeeCCCCcCC
Q 046289 70 FQRRKPVHNGHALLMTDTRRRLLDMGCQNPIIL--LH-----------YWRMKQHDKVLEDGVLDPETTVVSIFPSPMHY 136 (243)
Q Consensus 70 fQTrnPlHraHe~l~~~~~~~~~e~~~~~~~ll--l~-----------~~r~r~y~~~l~~~y~p~~~~~l~~lp~~mry 136 (243)
.=|-||+|.||..++++| .+.. +-+. +. +-|++-.+..++ -+| .+.+..+.
T Consensus 9 ~GsFDPiH~GHl~i~~~a----~~~~---d~viv~v~~~p~K~~~~~~~~R~~ml~~a~~--~~~--~v~v~~~e----- 72 (168)
T 3f3m_A 9 PGSFDPITYGHLDIIERS----TDRF---DEIHVCVLKNSKKEGTFSLEERMDLIEQSVK--HLP--NVKVHQFS----- 72 (168)
T ss_dssp EECCTTCCHHHHHHHHHH----GGGS---SEEEEEECC-----CCSCHHHHHHHHHHHTT--TCT--TEEEEECC-----
T ss_pred EEEcCcCCHHHHHHHHHH----HHhC---CEEEEEEcCCCCCCCCCCHHHHHHhHHHHhc--CCC--CEEEEEcC-----
Confidence 467899999999998754 3332 2221 11 789998888776 233 34455454
Q ss_pred CCchHHHHHHHHHHhcCCcEeEecCCCCCCCCccccccee----EEeCCCCeEeeeCCCCCccccccCHHHHHHHHhCCC
Q 046289 137 AGPTEVQWHAKARINAGANFYIVGRDRAGMGLESEYVKVA----AYDKTQGKMAFFDPSRAQEFLFISGTKMRTLARNKE 212 (243)
Q Consensus 137 AGPrEal~hAiirkN~GcTHfIvGrdHAG~g~~~~~~~~~----~Y~~~~~~~~~~~~h~~~~~~~iSgt~iR~~L~~G~ 212 (243)
|-. . =.-+.++++.||.|-|-. .+|...+... ...+..+++ ...+.+ ....||+|.||++++.|.
T Consensus 73 -~~t---v--d~~~~l~~~~~I~G~d~~--~d~~~e~~~a~~~r~l~~~~e~v-~l~~~p--~~~~ISST~IRe~~~~g~ 141 (168)
T 3f3m_A 73 -GLL---V--DYCEQVGAKTIIRGLRAV--SDFEYELRLTSMNKKLNNEIETL-YMMSST--NYSFISSSIVKEVAAYRA 141 (168)
T ss_dssp -SCH---H--HHHHHHTCCEEEEEECTT--CCHHHHHHHHHHHHHHCTTSEEE-EEECCT--TTTTCCHHHHHHHHHTTC
T ss_pred -CCH---H--HHHHHcCCCEEEEcCCch--hhhhHHHHHhHHhHhhCCCCcEE-EEeCCc--ccccccHHHHHHHHHcCC
Confidence 311 1 112557999999997632 2221011000 001222222 221211 223499999999999998
Q ss_pred CCCCCCcChhHHHHHHHHHh
Q 046289 213 NPPDGFMCPGGWKVLVEYYD 232 (243)
Q Consensus 213 ~pP~~f~rpeV~~vl~~~~~ 232 (243)
.+ ..|..|.|.+-|.+.++
T Consensus 142 ~i-~~lvP~~V~~~i~~~~~ 160 (168)
T 3f3m_A 142 DI-SEFVPPYVEKALKKKFK 160 (168)
T ss_dssp CC-TTTSCHHHHHHHHHHHC
T ss_pred Ch-hHHCCHHHHHHHHHhhc
Confidence 76 67899999999888765
No 17
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=97.49 E-value=0.0026 Score=53.75 Aligned_cols=144 Identities=20% Similarity=0.195 Sum_probs=87.3
Q ss_pred ccEEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEe----------h-HHHHHHHHHHHHcCCCCCCcEEEeeCCCC
Q 046289 65 DAVFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILL----------H-YWRMKQHDKVLEDGVLDPETTVVSIFPSP 133 (243)
Q Consensus 65 ~~VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll----------~-~~r~r~y~~~l~~~y~p~~~~~l~~lp~~ 133 (243)
+.++..=|-||+|+||..+++++.+.+ |.. .+.+ . +-|++-.+.+++ + + +.+.+..+.
T Consensus 23 ki~v~~GsFDpiH~GHl~li~~A~~~~-d~v----iv~v~~~p~K~~l~s~eeR~~ml~~~~~-~-v--~~v~v~~f~-- 91 (187)
T 3k9w_A 23 VVAVYPGTFDPLTRGHEDLVRRASSIF-DTL----VVGVADSRAKKPFFSLEERLKIANEVLG-H-Y--PNVKVMGFT-- 91 (187)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHS-SEE----EEEEECCGGGCCSSCHHHHHHHHHHHHT-T-C--TTEEEEEES--
T ss_pred EEEEEEEeCCcCcHHHHHHHHHHHHHC-CcE----EEEEecCCccCCCCCHHHHHHHHHHHhc-c-C--CcEEEEech--
Confidence 456667789999999999988664332 221 1111 1 889999988876 2 3 445444443
Q ss_pred cCCCCchHHHHHHHHHHhcCCcEeEecCCCCCCCCcccccceeE----EeCCCCeEeeeCCCCCccccccCHHHHHHHHh
Q 046289 134 MHYAGPTEVQWHAKARINAGANFYIVGRDRAGMGLESEYVKVAA----YDKTQGKMAFFDPSRAQEFLFISGTKMRTLAR 209 (243)
Q Consensus 134 mryAGPrEal~hAiirkN~GcTHfIvGrdHAG~g~~~~~~~~~~----Y~~~~~~~~~~~~h~~~~~~~iSgt~iR~~L~ 209 (243)
|-. --. .+.+|+..+|+|-|- +.+|.-.+.... ..+.+.+ +...+ ......||+|.||++++
T Consensus 92 ----~~~----~d~-l~~l~~~~iv~G~r~--~~Df~~E~~la~~nr~l~~~iet-v~l~~--~~~~~~ISST~IRe~~~ 157 (187)
T 3k9w_A 92 ----GLL----KDF-VRANDARVIVRGLRA--VSDFEYEFQMAGMNRYLLPDVET-MFMTP--SDQYQFISGTIVREIAQ 157 (187)
T ss_dssp ----SCH----HHH-HHHTTCSEEEEECCT--TSCHHHHHHHHHHHHHHCTTCEE-EEECC--CGGGTTCCHHHHHHHHH
T ss_pred ----hhH----HHH-HHHcCCCEEEECCCc--ccccchHHHHHHHHHHhCCCCcE-EEEec--ccccccccHHHHHHHHH
Confidence 211 112 356899999999552 222210110000 0122222 22211 22456899999999999
Q ss_pred CCCCCCCCCcChhHHHHHHHHHhhc
Q 046289 210 NKENPPDGFMCPGGWKVLVEYYDSL 234 (243)
Q Consensus 210 ~G~~pP~~f~rpeV~~vl~~~~~~~ 234 (243)
.|.++ ..|..|.|.+-|.+-++..
T Consensus 158 ~g~~i-~~lVP~~V~~~i~~k~~~~ 181 (187)
T 3k9w_A 158 LGGDV-SKFVFPSVEKWLTEKVAAM 181 (187)
T ss_dssp TTCCC-TTTSCHHHHHHHHHHHHHH
T ss_pred cCCCh-hHHCCHHHHHHHHHHhccc
Confidence 99976 6789999999999887654
No 18
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=97.39 E-value=0.0018 Score=52.87 Aligned_cols=136 Identities=18% Similarity=0.116 Sum_probs=79.3
Q ss_pred EEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEe-------------h-HHHHHHHHHHHHcCCCCCCcEEEeeCCCC
Q 046289 68 FAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILL-------------H-YWRMKQHDKVLEDGVLDPETTVVSIFPSP 133 (243)
Q Consensus 68 vafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll-------------~-~~r~r~y~~~l~~~y~p~~~~~l~~lp~~ 133 (243)
+..=|-||+|.||..|++.|... .|. -.+++ . +-|++-.+..+++ +|. .+.+..++
T Consensus 4 i~~GsFdp~H~GH~~l~~~a~~~-~d~----v~v~v~~~~~p~~~~~~~~~~~R~~m~~~~~~~--~~~-~v~v~~~d-- 73 (168)
T 1f9a_A 4 FIIGRFQPFHKGHLEVIKKIAEE-VDE----IIIGIGSAQKSHTLENPFTAGERILMITQSLKD--YDL-TYYPIPIK-- 73 (168)
T ss_dssp EEEECCTTCCHHHHHHHHHHTTT-CSE----EEEEECSTTCCSSSSCCSCHHHHHHHHHHHHTT--SSC-EEEEEECC--
T ss_pred EEEEecCCcCHHHHHHHHHHHHh-CCe----EEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHhc--CCC-ceEEEeeC--
Confidence 33457899999999998755322 121 01122 1 7899999988872 342 23222222
Q ss_pred cCCCCchHHHHHHHHH-HhcCCcEeEecCCCCCCCCcccccceeEEeCCCCeEeeeCCCCCccccccCHHHHHHHHhCCC
Q 046289 134 MHYAGPTEVQWHAKAR-INAGANFYIVGRDRAGMGLESEYVKVAAYDKTQGKMAFFDPSRAQEFLFISGTKMRTLARNKE 212 (243)
Q Consensus 134 mryAGPrEal~hAiir-kN~GcTHfIvGrdHAG~g~~~~~~~~~~Y~~~~~~~~~~~~h~~~~~~~iSgt~iR~~L~~G~ 212 (243)
..+. +..|+..++ ..+.++.+++||+.. ...+.. ..-..+. .| ......||+|.||+++++|.
T Consensus 74 ~l~~---~~~w~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-----~~i~~~~-~~--~~~~~~ISST~IR~~~~~g~ 137 (168)
T 1f9a_A 74 DIEF---NSIWVSYVESLTPPFDIVYSGNPLV-----RVLFEE-----RGYEVKR-PE--MFNRKEYSGTEIRRRMLNGE 137 (168)
T ss_dssp CCSC---GGGHHHHHHHHSCCCSEEECCCHHH-----HHHHHH-----TTCEEEC-CC--CCSTTTSSHHHHHHHHHHTC
T ss_pred Cccc---HHHHHHHHHHhccCCCEEEECcHHH-----HHhhhh-----cCcEEEe-CC--ccccCcccHHHHHHHHHcCC
Confidence 2222 346887655 455778777787531 111110 0001111 12 11233599999999999998
Q ss_pred CCCCCCcChhHHHHHHHH
Q 046289 213 NPPDGFMCPGGWKVLVEY 230 (243)
Q Consensus 213 ~pP~~f~rpeV~~vl~~~ 230 (243)
. ...|..|+|.+.|.+.
T Consensus 138 ~-i~~lvP~~V~~yI~~~ 154 (168)
T 1f9a_A 138 K-WEHLVPKAVVDVIKEI 154 (168)
T ss_dssp C-CGGGSCHHHHHHHHHH
T ss_pred C-hhHcCCHHHHHHHHHc
Confidence 6 4668899999988764
No 19
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=97.21 E-value=0.0065 Score=52.89 Aligned_cols=146 Identities=18% Similarity=0.238 Sum_probs=84.7
Q ss_pred EEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEe--h-------------HHHHHHHHHHHHcCCCCCCcEEEeeCCC
Q 046289 68 FAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILL--H-------------YWRMKQHDKVLEDGVLDPETTVVSIFPS 132 (243)
Q Consensus 68 vafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll--~-------------~~r~r~y~~~l~~~y~p~~~~~l~~lp~ 132 (243)
+..=|-||+|.||..|++.|...+ .. +.+++ . +-|++-.+..++ + . +.+.+ .+.
T Consensus 27 i~~GsFdPiH~GHl~li~~a~~~~-~l----d~v~v~~~~~~p~K~~~~~~~~~R~~ml~~a~~-~-~--~~v~v--~~~ 95 (242)
T 1yum_A 27 LFGGTFDPVHIGHMRSAVEMAEQF-AL----DELRLLPNARPPHRETPQVSAAQRLAMVERAVA-G-V--ERLTV--DPR 95 (242)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHH-TC----SEEEEEECCCCGGGSCTTCCHHHHHHHHHHHHT-T-C--TTEEE--CCG
T ss_pred EEEeeCcHhhHHHHHHHHHHHHHc-CC----CEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHhc-C-C--CeEEE--eee
Confidence 334689999999999998765443 11 22221 1 788888887676 2 2 34443 455
Q ss_pred CcCCCCchHHHH-HHHHHHhcCCc---EeEecCCC-CCCCCccc------ccceeEEeCC--------------------
Q 046289 133 PMHYAGPTEVQW-HAKARINAGAN---FYIVGRDR-AGMGLESE------YVKVAAYDKT-------------------- 181 (243)
Q Consensus 133 ~mryAGPrEal~-hAiirkN~GcT---HfIvGrdH-AG~g~~~~------~~~~~~Y~~~-------------------- 181 (243)
...-.||.-.+= =..+++.||.+ .||+|-|- +.+..+++ ..+.+++...
T Consensus 96 e~~~~~~sytvdtl~~l~~~~~p~~~~~fI~G~D~l~~l~~W~~~~~i~~~~~~vv~~R~~~~~~~~~e~~~~~~~~~~~ 175 (242)
T 1yum_A 96 ELQRDKPSYTIDTLESVRAELAADDQLFMLIGWDAFCGLPTWHRWEALLDHCHIVVLQRPDADSEPPESLRDLLAARSVA 175 (242)
T ss_dssp GGGSSSSCCHHHHHHHHHHHSCTTCEEEEEEEHHHHTTGGGSTTGGGSTTTCEEEEEECSSSCCCCCGGGHHHHHHHBCS
T ss_pred eecCCCCCCHHHHHHHHHHHhCCCCcEEEEEehhHhhhhhhhcCHHHHHhhCcEEEEECCCchhhhhHHHHHHHHHhhcc
Confidence 555556533321 12356777766 68888763 12212221 1111222211
Q ss_pred --------CCeEeeeCCCCCccccccCHHHHHHHHhCCCCCCCCCcChhHHHHHHH
Q 046289 182 --------QGKMAFFDPSRAQEFLFISGTKMRTLARNKENPPDGFMCPGGWKVLVE 229 (243)
Q Consensus 182 --------~~~~~~~~~h~~~~~~~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~ 229 (243)
.+++.... .....||+|.||+++++|.. ...|..++|.+.|.+
T Consensus 176 ~~~~L~~~~~~i~~~~----~~~~~ISST~IR~~i~~g~~-i~~lVP~~V~~yI~~ 226 (242)
T 1yum_A 176 DPQALKGPGGQITFVW----QTPLAVSATQIRALLGAGRS-VRFLVPDAVLNYIEA 226 (242)
T ss_dssp CGGGCCSSSCCEEEEE----CCCCSCCHHHHHHHHHTTCC-CBTTBCHHHHHHHHH
T ss_pred chhhhccCCCeEEEec----CCCCcCcHHHHHHHHHcCCC-hhHcCCHHHHHHHHH
Confidence 11121110 11257999999999999986 567899999999987
No 20
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=97.18 E-value=0.00045 Score=56.89 Aligned_cols=134 Identities=12% Similarity=0.137 Sum_probs=81.5
Q ss_pred EEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEE--eh-----------HHHHHHHHHHHHcCCCCCCcEEEeeCCCCc
Q 046289 68 FAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIIL--LH-----------YWRMKQHDKVLEDGVLDPETTVVSIFPSPM 134 (243)
Q Consensus 68 vafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~ll--l~-----------~~r~r~y~~~l~~~y~p~~~~~l~~lp~~m 134 (243)
+-.=|-||+|.||..++++| .+.+ +-|. +. +-|++..+..++ .. +.+.+..+.
T Consensus 6 i~~GsFDPiH~GHl~ii~~A----~~~~---D~viv~v~~~~~K~~~~~~~eR~~ml~~a~~--~~--~~v~v~~~~--- 71 (157)
T 3nv7_A 6 IYPGTFDPVTNGHIDIIHRS----SELF---EKLIVAVAHSSAKNPMFSLDERLKMIQLATK--SF--KNVECVAFE--- 71 (157)
T ss_dssp EEEECCTTCCHHHHHHHHHH----HTTS---SEEEEEEECCGGGCCSSCHHHHHHHHHHHHT--TS--TTEEEEEEC---
T ss_pred EEEEEcCCCCHHHHHHHHHH----HHhC---CceEEEEccCCCCCCCCCHHHHHHHHHHHhc--CC--CcEEEEecC---
Confidence 33467899999999998765 3332 3332 11 889999998886 23 345444332
Q ss_pred CCCCchHHHHHHHHHHhcCCcEeEecCCCCCCCCcccccceeEEe----CCCCeEeeeCCCCCccccccCHHHHHHHHhC
Q 046289 135 HYAGPTEVQWHAKARINAGANFYIVGRDRAGMGLESEYVKVAAYD----KTQGKMAFFDPSRAQEFLFISGTKMRTLARN 210 (243)
Q Consensus 135 ryAGPrEal~hAiirkN~GcTHfIvGrdHAG~g~~~~~~~~~~Y~----~~~~~~~~~~~h~~~~~~~iSgt~iR~~L~~ 210 (243)
| ++-. ..+.+|++-+|-|-+- +++|.-.|....+. +.+++. .. + .......||+|.||+.++.
T Consensus 72 ---~----l~~~-~~~~~~~~~ivrG~r~--~~D~~ye~~~a~~n~~l~~~ietv-~l-~-~~~~~~~iSSt~vRe~~~~ 138 (157)
T 3nv7_A 72 ---G----LLAY-LAKEYHCKVLVRGLRV--VSDFEYELQMGYANKSLNHELETL-YF-M-PTLQNAFISSSIVRSIIAH 138 (157)
T ss_dssp ---S----CHHH-HHHHTTCCCBCCCCSC--CCCHHHHHHHHHHHHHSSCCCCCC-CC-C-CCHHHHTCCHHHHHHHHHT
T ss_pred ---c----hHHH-HHHHcCCCEEEECCcc--cchhhhhHHHHHHHHHhCCCceEE-EE-c-CCcccceeeHHHHHHHHHc
Confidence 2 3333 3456799988888442 33431122211111 222211 11 1 2345568999999999999
Q ss_pred CCCCCCCCcChhHHHHHHH
Q 046289 211 KENPPDGFMCPGGWKVLVE 229 (243)
Q Consensus 211 G~~pP~~f~rpeV~~vl~~ 229 (243)
|.++ ..|..|.|++.|.+
T Consensus 139 ggdv-~~~VP~~V~~~l~~ 156 (157)
T 3nv7_A 139 KGDA-SHLVPKEIYPLISK 156 (157)
T ss_dssp TCCC-TTTSCTTTHHHHCC
T ss_pred CCCh-HHhCCHHHHHHHhh
Confidence 9986 67888988887753
No 21
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=97.11 E-value=0.0036 Score=51.60 Aligned_cols=136 Identities=18% Similarity=0.137 Sum_probs=78.4
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEE--eh-----------HHHHHHHHHHHHcCCCCCCcEEEeeCCCC
Q 046289 67 VFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIIL--LH-----------YWRMKQHDKVLEDGVLDPETTVVSIFPSP 133 (243)
Q Consensus 67 VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~ll--l~-----------~~r~r~y~~~l~~~y~p~~~~~l~~lp~~ 133 (243)
++..=|-||+|.||..++++| .+.+ +-|. +. +-|++-.+.++. . +.+.+..+.
T Consensus 8 ~i~~GsFDPiH~GHl~li~~A----~~~~---d~viv~v~~~~~K~~~~~~~~R~~m~~~~~~--~---~~v~V~~~~-- 73 (162)
T 4f3r_A 8 AIYPGTFDPLTNGHVDIIERA----LPLF---NKIIVACAPTSRKDPHLKLEERVNLIADVLT--D---ERVEVLPLT-- 73 (162)
T ss_dssp EEEEECCTTCCHHHHHHHHHH----GGGC---SEEEEEECCC------CCHHHHHHHHHHHCC--C---TTEEEEECC--
T ss_pred EEEEEEcCCCCHHHHHHHHHH----HHHC---CcEEEEEecCCccCCCCCHHHHHHHHHHhhC--C---CCEEEEecc--
Confidence 344567899999999998754 3332 3221 11 789988887776 2 445455443
Q ss_pred cCCCCchHHHHHHHHHHhcCCcEeEecCCCCCCCCccccccee----EEeCCCCeEeeeCCCCCccccccCHHHHHHHHh
Q 046289 134 MHYAGPTEVQWHAKARINAGANFYIVGRDRAGMGLESEYVKVA----AYDKTQGKMAFFDPSRAQEFLFISGTKMRTLAR 209 (243)
Q Consensus 134 mryAGPrEal~hAiirkN~GcTHfIvGrdHAG~g~~~~~~~~~----~Y~~~~~~~~~~~~h~~~~~~~iSgt~iR~~L~ 209 (243)
| +.--.+ +.+|++.||.|-|-. .+|...+... ...+.+.++--. + ......||+|.||++++
T Consensus 74 ----~----l~~~~~-~~~~~~~~v~G~r~~--~Df~~e~~~a~~nr~l~~~ietv~l~-~--~~~~~~ISST~IRe~~~ 139 (162)
T 4f3r_A 74 ----G----LLVDFA-KTHQANFILRGLRAV--SDFDYEFQLAHMNYQLSPEIETIFLP-A--REGYSYVSGTMVREIVT 139 (162)
T ss_dssp ----S----CHHHHH-HHTTCCEEEEEECSH--HHHHHHHHHHHHHHHHCTTCEEEEEE-C--CGGGSSCCHHHHHHHHH
T ss_pred ----c----hHHHHH-HHcCCCEEEECCCch--hhhhhHHHHHHHHHHhCCCccEEEEE-C--CcccccccHHHHHHHHH
Confidence 3 111223 457999999995421 1111011100 011233332211 1 12445899999999999
Q ss_pred CCCCCCCCCcChhHHHHHHHHH
Q 046289 210 NKENPPDGFMCPGGWKVLVEYY 231 (243)
Q Consensus 210 ~G~~pP~~f~rpeV~~vl~~~~ 231 (243)
.|.++ ..|..|.|.+-|.+-+
T Consensus 140 ~g~~i-~~~VP~~V~~~l~~~~ 160 (162)
T 4f3r_A 140 LGGDV-SPFVPPLVARHLQKRR 160 (162)
T ss_dssp TTCCC-TTTSCHHHHHHC----
T ss_pred cCCCh-hHhCCHHHHHHHHHHh
Confidence 99977 7789998888777644
No 22
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=97.11 E-value=0.00049 Score=61.13 Aligned_cols=142 Identities=15% Similarity=0.112 Sum_probs=77.3
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEeh--------------HHHHHHHHHHHHcCCCCCCcEEEeeCCC
Q 046289 67 VFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILLH--------------YWRMKQHDKVLEDGVLDPETTVVSIFPS 132 (243)
Q Consensus 67 VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll~--------------~~r~r~y~~~l~~~y~p~~~~~l~~lp~ 132 (243)
++..=|-||+|+||..|++.+...+ |.. .+++- +-|++-.+..+.+ +|.+++.+-++..
T Consensus 10 ~i~~G~FdP~H~GH~~li~~a~~~~-d~v----~v~v~~~~~p~~~~~~~~~~~R~~m~~~~~~~--~~~~~~~~i~~~d 82 (341)
T 2qjo_A 10 GIYIGRFQPFHLGHLRTLNLALEKA-EQV----IIILGSHRVAADTRNPWRSPERMAMIEACLSP--QILKRVHFLTVRD 82 (341)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHE-EEE----EEEEEEETCCCCSSSCSCHHHHHHHHHTTSCH--HHHTTEEEEEEEC
T ss_pred EEEEEEeCCCCHHHHHHHHHHHHhC-CeE----EEEECCcccCCCCCCCCCHHHHHHHHHHHhhh--ccCCeEEEEECCC
Confidence 4445789999999999988664433 321 11111 6677665544431 1223344433332
Q ss_pred CcCCCCchHHHHHHHHH---Hhc--C-CcEeEecCCCCCCCCcccccceeEEeCCCCeEeeeCCCCCccccccCHHHHHH
Q 046289 133 PMHYAGPTEVQWHAKAR---INA--G-ANFYIVGRDRAGMGLESEYVKVAAYDKTQGKMAFFDPSRAQEFLFISGTKMRT 206 (243)
Q Consensus 133 ~mryAGPrEal~hAiir---kN~--G-cTHfIvGrdHAG~g~~~~~~~~~~Y~~~~~~~~~~~~h~~~~~~~iSgt~iR~ 206 (243)
.. ++ ...|+..++ +.+ | |+..++|.|..+...+...+ +. -..+ ..| ....||+|.||+
T Consensus 83 ~~-~~---~~~w~~~~~~l~~~l~r~~~~~~~~g~~~~~~~~~~~~~------~~-~~~~-~~~----~~~~iSST~IR~ 146 (341)
T 2qjo_A 83 WL-YS---DNLWLAAVQQQVLKITGGSNSVVVLGHRKDASSYYLNLF------PQ-WDYL-ETG----HYPDFSSTAIRG 146 (341)
T ss_dssp CT-TC---HHHHHHHHHHHHHHHHTTCSCEEEEECCCSGGGGGGGSC------TT-SEEE-ECC----CCTTCCHHHHHH
T ss_pred Cc-CC---hHHHHHHHHHHhHHhcCCCceEEEEcCCCCCChHHHHhc------cc-ccee-ecc----cCCCCCcHHHHH
Confidence 21 11 123444321 222 2 88999999874322111011 00 1111 122 235799999999
Q ss_pred HHhCCCCCCCC-CcChhHHHHHHHHH
Q 046289 207 LARNKENPPDG-FMCPGGWKVLVEYY 231 (243)
Q Consensus 207 ~L~~G~~pP~~-f~rpeV~~vl~~~~ 231 (243)
++++|....-| +..+.|++.|.++.
T Consensus 147 ~l~~g~~~~~~~lvp~~v~~~i~~~~ 172 (341)
T 2qjo_A 147 AYFEGKEGDYLDKVPPAIADYLQTFQ 172 (341)
T ss_dssp HHHHTCGGGTTTTSCHHHHHHHHHHT
T ss_pred HHHcCCCcchhhhCCHHHHHHHHHhc
Confidence 99999864312 67788988888763
No 23
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=97.11 E-value=0.00071 Score=62.16 Aligned_cols=133 Identities=15% Similarity=0.144 Sum_probs=79.0
Q ss_pred cEEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEeh---------------------HHHHHHHHHHHHcCCCCCCc
Q 046289 66 AVFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILLH---------------------YWRMKQHDKVLEDGVLDPET 124 (243)
Q Consensus 66 ~VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll~---------------------~~r~r~y~~~l~~~y~p~~~ 124 (243)
.|++.=+-+++|+||.+|++.+...+.+.+. +.+++. +-|++-.+. +--+.
T Consensus 17 ~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~--~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~------~gVD~ 88 (338)
T 2x0k_A 17 SAVTIGVFDGVHRGHQKLINATVEKAREVGA--KAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAES------FGIDG 88 (338)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHHHHHHHTC--EEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHH------TTCSE
T ss_pred eEEEEEeCCcccHHHHHHHHHHHHHHHHcCC--cEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHh------cCCCE
Confidence 5777888999999999999988776655431 222221 444443332 22344
Q ss_pred EEEeeCCCCcCCC--CchHHHHHHHHHHhcCCcEeEecCCCC-CCCCccc--ccceeEEeCCCCeEeeeCCCCCcccccc
Q 046289 125 TVVSIFPSPMHYA--GPTEVQWHAKARINAGANFYIVGRDRA-GMGLESE--YVKVAAYDKTQGKMAFFDPSRAQEFLFI 199 (243)
Q Consensus 125 ~~l~~lp~~mryA--GPrEal~hAiirkN~GcTHfIvGrdHA-G~g~~~~--~~~~~~Y~~~~~~~~~~~~h~~~~~~~i 199 (243)
++ ++|....++ .| |.....++.+.+++.+++||-|+. |-+..++ .++. +|++ +--+...|.-..+-..|
T Consensus 89 v~--v~~F~~~~a~ls~-e~Fi~~il~~~l~~~~ivvG~Df~FG~~r~g~~~~L~~--~~~~-g~~V~~v~~~~~~~~~I 162 (338)
T 2x0k_A 89 VL--VIDFTRELSGTSP-EKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQ--ICQS-RLTVDVIDLLDDEGVRI 162 (338)
T ss_dssp EE--EECTTTSSSSCCH-HHHHHHCCCCCTCEEEEEEETTCEESGGGCEEHHHHHH--HTTT-TSEEEEECCCEETTEEC
T ss_pred EE--EccccHHHHhCCH-HHHHHHHHHhhcCCCEEEEeecCCCCCCCCCCHHHHHH--HhcC-CeEEEEECcEecCCccc
Confidence 44 345555555 34 445555677889999999999985 4332221 2222 2333 21121222111123479
Q ss_pred CHHHHHHHHhCCC
Q 046289 200 SGTKMRTLARNKE 212 (243)
Q Consensus 200 Sgt~iR~~L~~G~ 212 (243)
|+|.||++|++|.
T Consensus 163 SST~IR~~L~~G~ 175 (338)
T 2x0k_A 163 SSTTVREFLSEGD 175 (338)
T ss_dssp SHHHHHHHHHTTC
T ss_pred ccchHHHHHhcCc
Confidence 9999999999996
No 24
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=97.10 E-value=0.0021 Score=50.09 Aligned_cols=113 Identities=18% Similarity=0.232 Sum_probs=48.5
Q ss_pred cEEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEeh----------------HHHHHHHHHHHHcCCCCCCcEEEee
Q 046289 66 AVFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILLH----------------YWRMKQHDKVLEDGVLDPETTVVSI 129 (243)
Q Consensus 66 ~VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll~----------------~~r~r~y~~~l~~~y~p~~~~~l~~ 129 (243)
.++..=+-||+|+||..|++.|.+.+ +. -.+++. +-|++-.++ +. . -+.+++..
T Consensus 3 ~~~~~G~FDp~H~GH~~li~~a~~~~-~~----~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~-~~--~--~d~v~~~~ 72 (132)
T 2b7l_A 3 RVITYGTYDLLHYGHIELLRRAREMG-DY----LIVALSTDEFNQIKHKKSYYDYEQRKMMLES-IR--Y--VDLVIPEK 72 (132)
T ss_dssp EEEEEECCCSCCHHHHHHHHHHHHTS-SE----EEEEEECHHHHHHTTCCCSSCHHHHHHHHHT-BT--T--CCEEEEEC
T ss_pred EEEEeeecCcCCHHHHHHHHHHHHhC-Cc----EEEEEECCHHHhccCCCCCCCHHHHHHHHHh-cC--C--CCEEEECC
Confidence 35556678999999999988653322 11 011221 455554442 11 2 24444421
Q ss_pred CCCCcCCCCchHHHHHHHHHHhcCCcEeEecCCCCCCCCcccccceeEEeCCCCeEeeeCCCCCccccccCHHHHHHHHh
Q 046289 130 FPSPMHYAGPTEVQWHAKARINAGANFYIVGRDRAGMGLESEYVKVAAYDKTQGKMAFFDPSRAQEFLFISGTKMRTLAR 209 (243)
Q Consensus 130 lp~~mryAGPrEal~hAiirkN~GcTHfIvGrdHAG~g~~~~~~~~~~Y~~~~~~~~~~~~h~~~~~~~iSgt~iR~~L~ 209 (243)
.|.+-+ .. + +.++++.+++|.|..| .+. .+.. ..+.....+ ...+|+|.||++++
T Consensus 73 --------~~~~~~-~~-~-~~~~~~~iv~G~D~~~--~~~-~L~~------~~~v~~i~~-----~~~iSST~IR~~i~ 127 (132)
T 2b7l_A 73 --------GWGQKE-DD-V-EKFDVDVFVMGHDWEG--EFD-FLKD------KCEVIYLKR-----TEGISTTKIKQELY 127 (132)
T ss_dssp --------CGGGHH-HH-H-HHTTCCEEEECGGGTT--TTG-GGTT------TSEEEECSS-----CC------------
T ss_pred --------ChHHHH-HH-H-HHcCCCEEEECCCCcC--cHH-HHHh------CCEEEEECC-----CCCcCHHHHHHHHH
Confidence 122222 22 3 5689999999999864 211 2221 122333222 23599999999999
Q ss_pred CCCC
Q 046289 210 NKEN 213 (243)
Q Consensus 210 ~G~~ 213 (243)
+|..
T Consensus 128 ~g~~ 131 (132)
T 2b7l_A 128 GKDA 131 (132)
T ss_dssp ----
T ss_pred hcCC
Confidence 9963
No 25
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=97.04 E-value=0.0041 Score=51.75 Aligned_cols=133 Identities=13% Similarity=0.126 Sum_probs=77.8
Q ss_pred eecCCCCcchHHHHHHHHHHHHHhcCCCCCeEE--eh-----------HHHHHHHHHHHHcCCCCCCcEEE-eeCCCCcC
Q 046289 70 FQRRKPVHNGHALLMTDTRRRLLDMGCQNPIIL--LH-----------YWRMKQHDKVLEDGVLDPETTVV-SIFPSPMH 135 (243)
Q Consensus 70 fQTrnPlHraHe~l~~~~~~~~~e~~~~~~~ll--l~-----------~~r~r~y~~~l~~~y~p~~~~~l-~~lp~~mr 135 (243)
.=|-||+|.||..+++.| .+.. +-|. +. +-|++-.+..++ .+ +.+.+ ..+.
T Consensus 8 ~GsFDPiH~GHl~i~~~a----~~~~---D~viv~v~~~~~K~~~~~~~~R~~ml~~a~~--~~--~~v~v~~~~e---- 72 (171)
T 3nd5_A 8 PGSFDPMTNGHLNLIERS----AKLF---DEVIIGVFINTSKQTLFTPEEKKYLIEEATK--EM--PNVRVIMQET---- 72 (171)
T ss_dssp EECCTTCCHHHHHHHHHH----HTTC---SEEEEEEEC------CCCHHHHHHHHHHHHT--TC--TTEEEEEECS----
T ss_pred EEEccccCHHHHHHHHHH----HHHC---CCeEEEEecCCCCCCCCCHHHHHHHHHHHHc--cC--CCEEEeeCCC----
Confidence 367899999999998755 3331 3222 11 789998888776 33 34444 5454
Q ss_pred CCCchHHHHHHHHHHhcCCcEeEecCCCCCCCCcccccce--e--EEeCCCCeEeeeCCCCCccccccCHHHHHHHHhCC
Q 046289 136 YAGPTEVQWHAKARINAGANFYIVGRDRAGMGLESEYVKV--A--AYDKTQGKMAFFDPSRAQEFLFISGTKMRTLARNK 211 (243)
Q Consensus 136 yAGPrEal~hAiirkN~GcTHfIvGrdHAG~g~~~~~~~~--~--~Y~~~~~~~~~~~~h~~~~~~~iSgt~iR~~L~~G 211 (243)
|-. . - ..+.++++.||.|-|-. .+|...+.. + ...+.++++... + ......||+|.||+.++.|
T Consensus 73 --~~t---v-d-~~~~l~~~~~i~G~~~~--~d~~~e~~la~~nr~l~~~~etv~l~-~--~~~~~~ISST~IRe~~~~g 140 (171)
T 3nd5_A 73 --QLT---V-E-SAKSLGANFLIRGIRNV--KDYEYEKDIAKMNQHLAPEIETVFLL-A--EEPYAHVSSSLLKEVLRFG 140 (171)
T ss_dssp --SCH---H-H-HHHHHTCCEEEEEECSH--HHHHHHHHHHHHHHHHCTTSEEEEEE-C--CGGGTTCCHHHHHHHHHTT
T ss_pred --CcH---H-H-HHHHCCCCEEEECCCch--hhhHHHHHHHHHhhhhcCCccEEEEe-C--CccccccchHHHHHHHHcC
Confidence 211 1 1 12456888999995421 111101100 0 001223332222 1 2234479999999999999
Q ss_pred CCCCCCCcChhHHHHHHHH
Q 046289 212 ENPPDGFMCPGGWKVLVEY 230 (243)
Q Consensus 212 ~~pP~~f~rpeV~~vl~~~ 230 (243)
.++ ..|..|.|.+-|.+.
T Consensus 141 ~~i-~~lVP~~V~~~i~~~ 158 (171)
T 3nd5_A 141 GDV-SDYLPPNIYHALKQK 158 (171)
T ss_dssp CCC-GGGSCHHHHHHHHHC
T ss_pred CCh-hHhCCHHHHHHHHHh
Confidence 875 678899898888764
No 26
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=97.03 E-value=0.00085 Score=56.07 Aligned_cols=135 Identities=16% Similarity=0.157 Sum_probs=77.4
Q ss_pred eecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEe-----h---------HHHHHHHHHHHHcCCCCCCcEEEeeCCCCcC
Q 046289 70 FQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILL-----H---------YWRMKQHDKVLEDGVLDPETTVVSIFPSPMH 135 (243)
Q Consensus 70 fQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll-----~---------~~r~r~y~~~l~~~y~p~~~~~l~~lp~~mr 135 (243)
.=|-||+|.||..+.+ + ++. + +-+.+ + +-|++-.+..+++ .|...+.+.-+.....
T Consensus 8 gGsFdPih~GHl~i~~-a----~~~-~--d~v~~~p~~~~~~k~~~~~~~~R~~m~~~a~~~--~~~~~~~v~~~E~~l~ 77 (177)
T 3h05_A 8 GSAFNPPSLGHKSVIE-S----LSH-F--DLVLLEPSIAHAWGKNMLDYPIRCKLVDAFIKD--MGLSNVQRSDLEQALY 77 (177)
T ss_dssp EECCSSCCHHHHHHHT-T----CTT-S--SEEEEEECC-------CCCHHHHHHHHHHHHHH--HCCTTEEECCHHHHHC
T ss_pred EeccchhhHHHHHHHH-H----HHH-C--CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHhc--CCCCcEEEEehhhhcc
Confidence 3678999999999964 3 222 1 32321 1 7798888888873 3433554443322210
Q ss_pred CCC-chH--HHHHHHHHHhcCCc--EeEecCCC-CCCCCccc---ccc--eeEEeCCCCeEeeeCCCCCccccccCHHHH
Q 046289 136 YAG-PTE--VQWHAKARINAGAN--FYIVGRDR-AGMGLESE---YVK--VAAYDKTQGKMAFFDPSRAQEFLFISGTKM 204 (243)
Q Consensus 136 yAG-PrE--al~hAiirkN~GcT--HfIvGrdH-AG~g~~~~---~~~--~~~Y~~~~~~~~~~~~h~~~~~~~iSgt~i 204 (243)
-.| |.- -.+.. +++.|.-. .||+|.|- .+....++ .++ .+++++ ....||+|+|
T Consensus 78 ~~~~~syT~dTl~~-l~~~~p~~~~~~iiG~D~l~~l~~W~~~~~l~~~~~~vv~~--------------r~~~iSST~I 142 (177)
T 3h05_A 78 QPGQSVTTYALLEK-IQEIYPTADITFVIGPDNFFKFAKFYKAEEITERWTVMACP--------------EKVKIRSTDI 142 (177)
T ss_dssp ----CCCHHHHHHH-HHHHSTTSEEEEEECHHHHHTGGGSTTHHHHHHHSEEEECC--------------CSSCCCHHHH
T ss_pred cCCCCcchHHHHHH-HHHHhcCCCeEEEEecchhhhcccchhHHHHHHhCCEEEEc--------------CCCCCcHHHH
Confidence 122 321 12332 35556444 48999984 23332221 111 122222 1568999999
Q ss_pred HHHHhCCCCCCCCCcChhHHHHHHHH
Q 046289 205 RTLARNKENPPDGFMCPGGWKVLVEY 230 (243)
Q Consensus 205 R~~L~~G~~pP~~f~rpeV~~vl~~~ 230 (243)
|+++++|+.+ ..+..++|.+.|.+.
T Consensus 143 R~~i~~g~~~-~~lvp~~V~~yI~~~ 167 (177)
T 3h05_A 143 RNALIEGKDI-STYTTPTVSELLLNE 167 (177)
T ss_dssp HHHHHHTCCC-TTTSCHHHHHHHHC-
T ss_pred HHHHHcCCCh-hHhCCHHHHHHHHHc
Confidence 9999999864 678889899888763
No 27
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=97.02 E-value=0.011 Score=48.73 Aligned_cols=135 Identities=17% Similarity=0.179 Sum_probs=76.9
Q ss_pred eecCCCCcchHHHHHHHHHHHHHhcCCCCCeEE--eh-----------HHHHHHHHHHHHcCCCCCCcEEEeeCCCCcCC
Q 046289 70 FQRRKPVHNGHALLMTDTRRRLLDMGCQNPIIL--LH-----------YWRMKQHDKVLEDGVLDPETTVVSIFPSPMHY 136 (243)
Q Consensus 70 fQTrnPlHraHe~l~~~~~~~~~e~~~~~~~ll--l~-----------~~r~r~y~~~l~~~y~p~~~~~l~~lp~~mry 136 (243)
.=|-||+|.||..+++.| .+.. +-|. +. +-|++-.+..++ .+| .+.+..+.
T Consensus 18 ~GsFdP~H~GHl~l~~~A----~~~~---D~viv~v~~~~~kk~~~~~~~R~~ml~~a~~--~~~--~v~v~~~e----- 81 (173)
T 1vlh_A 18 PGSFDPITLGHVDIIKRA----LSIF---DELVVLVTENPRKKCMFTLEERKKLIEEVLS--DLD--GVKVDVHH----- 81 (173)
T ss_dssp EECCTTCCHHHHHHHHHH----HTTC---SEEEEEEECCTTCCCSSCHHHHHHHHHHHTT--TCT--TEEEEEEC-----
T ss_pred EEEECcCcHHHHHHHHHH----HHHC---CEEEEEEeCCCCCCCCCCHHHHHHHHHHHhc--CCC--CEEEecCc-----
Confidence 367899999999998754 3332 4332 11 889998887676 333 45555444
Q ss_pred CCchHHHHHHHHHHhcCCcEeEecCCCCCCCCcccccceeEEe----CCCCeEeeeCCCCCccccccCHHHHHHHHhCCC
Q 046289 137 AGPTEVQWHAKARINAGANFYIVGRDRAGMGLESEYVKVAAYD----KTQGKMAFFDPSRAQEFLFISGTKMRTLARNKE 212 (243)
Q Consensus 137 AGPrEal~hAiirkN~GcTHfIvGrdHAG~g~~~~~~~~~~Y~----~~~~~~~~~~~h~~~~~~~iSgt~iR~~L~~G~ 212 (243)
|- + .-.-+.++++.||-|-.. ..+|...+...++. +....+... + ......||+|.||+.+++|.
T Consensus 82 -~~----t-vd~l~~l~~~~~i~gl~~--w~d~~~~~~~~~~~r~~~~~~~~i~l~-~--~~~~~~iSST~IR~~i~~g~ 150 (173)
T 1vlh_A 82 -GL----L-VDYLKKHGIKVLVRGLRA--VTDYEYELQMALANKKLYSDLETVFLI-A--SEKFSFISSSLVKEVALYGG 150 (173)
T ss_dssp -SC----H-HHHHHHHTCCEEEEEECT--TSCHHHHHHHHHHHHHHSTTCEEEEEE-C--CGGGTTCCHHHHHHHHHTTC
T ss_pred -ch----H-HHHHHHhCCCeEEeCCCc--ccchhhccchhhcCCCCCCCCcEEEEe-C--CCCCCceeHHHHHHHHHcCC
Confidence 31 1 112255788888855211 11111111000000 011111111 1 11223499999999999998
Q ss_pred CCCCCCcChhHHHHHHHHHh
Q 046289 213 NPPDGFMCPGGWKVLVEYYD 232 (243)
Q Consensus 213 ~pP~~f~rpeV~~vl~~~~~ 232 (243)
.+ ..|..|+|.+.|.+.|+
T Consensus 151 ~i-~~lvP~~V~~yI~~~~~ 169 (173)
T 1vlh_A 151 DV-TEWVPPEVARALNEKLK 169 (173)
T ss_dssp CC-TTTSCHHHHHHHHHHTC
T ss_pred Ch-hHcCCHHHHHHHHHHHh
Confidence 64 56889999999988774
No 28
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=96.87 E-value=0.0074 Score=49.97 Aligned_cols=146 Identities=11% Similarity=0.140 Sum_probs=80.3
Q ss_pred EEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEE--eh--------------HHHHHHHHHHHHcCCCCCCcEEEeeCC
Q 046289 68 FAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIIL--LH--------------YWRMKQHDKVLEDGVLDPETTVVSIFP 131 (243)
Q Consensus 68 vafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~ll--l~--------------~~r~r~y~~~l~~~y~p~~~~~l~~lp 131 (243)
+..=|-||+|.||..|++.+.+.+ + .+.++ .+ +-|++-.+..+++ +| .+.++ +
T Consensus 6 v~~GsFdp~H~GH~~l~~~a~~~~---~--~d~v~~~~~~~~~~k~~~~~~~~~~R~~m~~~a~~~--~~--~v~v~--~ 74 (189)
T 2h29_A 6 LYGGQFNPIHTAHMIVASEVFHEL---Q--PDEFYFLPSFMSPLKKHHDFIDVQHRLTMIQMIIDE--LG--FGDIC--D 74 (189)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHH---C--CSEEEEEECSBCTTSCCCSSCCCHHHHHHHHHHHHH--HT--CCEEC--C
T ss_pred EEEecCCcccHHHHHHHHHHHHHc---C--CCEEEEEECCCCCCCcCCCCCCHHHHHHHHHHHHcC--CC--CEEEe--h
Confidence 334678999999999988764432 1 12221 11 7888888876662 23 23333 2
Q ss_pred CCcCCCCchHH--HHHHHHHHhcCCc--EeEecCCCC-CCCCccc------ccceeEEeCCCC------eEeeeCCCCCc
Q 046289 132 SPMHYAGPTEV--QWHAKARINAGAN--FYIVGRDRA-GMGLESE------YVKVAAYDKTQG------KMAFFDPSRAQ 194 (243)
Q Consensus 132 ~~mryAGPrEa--l~hAiirkN~GcT--HfIvGrdHA-G~g~~~~------~~~~~~Y~~~~~------~~~~~~~h~~~ 194 (243)
....-.||.-. .+.. +++.|.-+ .||+|-|-. ....+++ .+...++..... ++... +.+
T Consensus 75 ~e~~~~~~syt~dtl~~-l~~~~p~~~~~~i~G~D~~~~~~~W~~~~~i~~~~~~~v~~R~~~~~~~~~~i~~~-~~~-- 150 (189)
T 2h29_A 75 DEIKRGGQSYTYDTIKA-FKEQHKDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAI-QIP-- 150 (189)
T ss_dssp HHHHHCSBCCHHHHHHH-HHHHSTTEEEEEEEEHHHHTTGGGSTTHHHHHHHCEEEEECCSSSCCCCCTTSEEE-CCC--
T ss_pred HHhcCCCCCCHHHHHHH-HHHHCCCCcEEEEEecchhhhhccccCHHHHHhhCcEEEEECCCCccccCCcEEEE-cCC--
Confidence 22222354211 2222 24444322 788898753 2222221 122233333211 11111 111
Q ss_pred cccccCHHHHHHHHhCCCCCCCCCcChhHHHHHHHH
Q 046289 195 EFLFISGTKMRTLARNKENPPDGFMCPGGWKVLVEY 230 (243)
Q Consensus 195 ~~~~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~~ 230 (243)
...||+|.||+++++|..+ ..+..|.|.+.|.+.
T Consensus 151 -~~~ISST~IR~~i~~g~~~-~~lvP~~V~~yI~~~ 184 (189)
T 2h29_A 151 -RVDISSTMIRQRVSEGKSI-QVLVPKSVENYIKGE 184 (189)
T ss_dssp -CBCCCHHHHHHHHHTTCCC-BTTBCHHHHHHHHHH
T ss_pred -CCccCHHHHHHHHHcCCCh-hhcCCHHHHHHHHHh
Confidence 2679999999999999864 568899999988763
No 29
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=96.76 E-value=0.0046 Score=55.24 Aligned_cols=142 Identities=18% Similarity=0.189 Sum_probs=81.2
Q ss_pred ecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEeh--------------HHHHHHHHHHHHcCCCCCCcEEEeeCCCCcCC
Q 046289 71 QRRKPVHNGHALLMTDTRRRLLDMGCQNPIILLH--------------YWRMKQHDKVLEDGVLDPETTVVSIFPSPMHY 136 (243)
Q Consensus 71 QTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll~--------------~~r~r~y~~~l~~~y~p~~~~~l~~lp~~mry 136 (243)
=|-||+|.||..|++.+... .|. -.+++- +-|++-.+..+++.-+|..++.+..++...
T Consensus 14 GtFdP~h~GHl~~~~~a~~~-~d~----~~~~v~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~~~~~~~~~~~~d~~-- 86 (352)
T 2qjt_B 14 GRFQPFHKGHLHNIIIALQN-SKK----VIINIGSCFNTPNIKNPFSFEQRKQMIESDLQVAGIDLDTVVIEPLADYF-- 86 (352)
T ss_dssp ECCTTCCHHHHHHHHHHHHS-EEE----EEEEEEEESCCCCSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEEEECCT--
T ss_pred EecCCCChHHHHHHHHHHHh-CCc----EEEEECCCCCCcccCCCCCHHHHHHHHHHHhccccCccceEEEEEcCCCc--
Confidence 57899999999998765332 221 112211 789999888886444666676665554322
Q ss_pred CCchHHHHHHHHHHhc------CCcEeEecCCCCCCCCcccccceeEEeCCCCeEeeeCCCCCccccccCHHHHHHHHhC
Q 046289 137 AGPTEVQWHAKARINA------GANFYIVGRDRAGMGLESEYVKVAAYDKTQGKMAFFDPSRAQEFLFISGTKMRTLARN 210 (243)
Q Consensus 137 AGPrEal~hAiirkN~------GcTHfIvGrdHAG~g~~~~~~~~~~Y~~~~~~~~~~~~h~~~~~~~iSgt~iR~~L~~ 210 (243)
.+ ..+|...+++.. .++..++|+.... ..+.-.+ .. .+... .-.....||+|.||+++..
T Consensus 87 ~~--~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~-~~~~~~~------~~--~~~~~---~~~~~~~iSST~IR~~~~~ 152 (352)
T 2qjt_B 87 YQ--EQKWQDELRKNVYKHAKNNNSIAIVGHIKDS-SSYYIRS------FP--EWDYI---GVDNYKNFNATEFRQKFYN 152 (352)
T ss_dssp TC--HHHHHHHHHHHHTTTSCSSCCEEECCBSSSS-HHHHHHH------CT--TSEEC---CBCCTTCCCHHHHHHHHHT
T ss_pred CC--hHHHHHHHHHHHHHhcccCCeEEEEcCCCCc-chhhhhc------CC--cccee---ccCCCCCCCchHHHHHHhc
Confidence 22 356777655533 2466666765311 0000000 00 00000 0012346999999999997
Q ss_pred -CCC-C-CCCCcCh-hHHHHHHHHHhh
Q 046289 211 -KEN-P-PDGFMCP-GGWKVLVEYYDS 233 (243)
Q Consensus 211 -G~~-p-P~~f~rp-eV~~vl~~~~~~ 233 (243)
|.. . -..|..+ .|++-|.++++.
T Consensus 153 ~g~~~~~i~~lvP~~~va~~I~~w~~~ 179 (352)
T 2qjt_B 153 GIISKQYMCSNDPKLGTYNFLTKFMDT 179 (352)
T ss_dssp TCCCGGGCSCSSTTSHHHHHHHHHTTS
T ss_pred cCcccchhhhcCChHHHHHHHHHHhcC
Confidence 721 1 3446778 899999988653
No 30
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=96.63 E-value=0.014 Score=49.06 Aligned_cols=140 Identities=12% Similarity=0.064 Sum_probs=82.0
Q ss_pred cEEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEeh-----------HHHHHHHHHHHHcCCCCCCcEEEeeCCCCc
Q 046289 66 AVFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILLH-----------YWRMKQHDKVLEDGVLDPETTVVSIFPSPM 134 (243)
Q Consensus 66 ~VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll~-----------~~r~r~y~~~l~~~y~p~~~~~l~~lp~~m 134 (243)
..+-.=|-||+|.||..++++|.+.. |.. .+++. +-|++-.+..++ .+| .+.+..+.
T Consensus 23 i~i~~GsFDPiH~GHl~ii~~A~~~~-D~V----iv~v~~np~K~~~~s~eeR~~mv~~a~~--~~~--~v~V~~~e--- 90 (177)
T 3nbk_A 23 GAVCPGSFDPVTLGHVDIFERAAAQF-DEV----VVAILVNPAKTGMFDLDERIAMVKESTT--HLP--NLRVQVGH--- 90 (177)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHS-SEE----EEEECCCTTSCCSSCHHHHHHHHHHHCT--TCT--TEEEEECC---
T ss_pred EEEEEEeeCCCCHHHHHHHHHHHHHC-CEE----EEEEcCCCCCCCCCCHHHHHHHHHHHhC--CCC--CEEEEecC---
Confidence 34446789999999999988664332 321 11111 889998888776 343 34445443
Q ss_pred CCCCchHHHHHHHHHHhcCCcEeEecCCCCCCCCcccccceeEEe---CCCCeEeeeCCCCCccccccCHHHHHHHHhCC
Q 046289 135 HYAGPTEVQWHAKARINAGANFYIVGRDRAGMGLESEYVKVAAYD---KTQGKMAFFDPSRAQEFLFISGTKMRTLARNK 211 (243)
Q Consensus 135 ryAGPrEal~hAiirkN~GcTHfIvGrdHAG~g~~~~~~~~~~Y~---~~~~~~~~~~~h~~~~~~~iSgt~iR~~L~~G 211 (243)
|- . .=..+.+|++-||-|-+-. .+|...|...-+. +.++++-.. .......||+|.||++++.|
T Consensus 91 ---~l----~-vd~~~~~~a~~ivrGlr~~--~Dfeye~~~a~~nr~l~~ietvfl~---~~~~~~~ISST~IRe~~~~g 157 (177)
T 3nbk_A 91 ---GL----V-VDFVRSCGMTAIVKGLRTG--TDFEYELQMAQMNKHIAGVDTFFVA---TAPRYSFVSSSLAKEVAMLG 157 (177)
T ss_dssp ---SC----H-HHHHHHTTCCEEEEEECTT--CCHHHHHHHHHHHHHHHCCEEEEEE---CCGGGSSCCHHHHHHHHHTT
T ss_pred ---ch----H-HHHHHHcCCCEEEECCCch--hHHHHHHHHHHHHHhcCCCceEEEe---CCCcccccchHHHHHHHHcC
Confidence 31 1 1233558999888773321 1111011100000 233332211 12345689999999999999
Q ss_pred CCCCCCCcChhHHHHHHHHH
Q 046289 212 ENPPDGFMCPGGWKVLVEYY 231 (243)
Q Consensus 212 ~~pP~~f~rpeV~~vl~~~~ 231 (243)
.++ ..|..|.|.+-|.+-+
T Consensus 158 gdv-~~lVP~~V~~~l~~~~ 176 (177)
T 3nbk_A 158 GDV-SELLPEPVNRRLRDRL 176 (177)
T ss_dssp CCC-GGGSCHHHHHHHHHHH
T ss_pred CCh-hHhCCHHHHHHHHHHh
Confidence 865 6789998988887644
No 31
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=96.40 E-value=0.018 Score=52.25 Aligned_cols=130 Identities=16% Similarity=0.152 Sum_probs=77.1
Q ss_pred ccEEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEeh-----------------------HHHHHHHHHHHHcCCCC
Q 046289 65 DAVFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILLH-----------------------YWRMKQHDKVLEDGVLD 121 (243)
Q Consensus 65 ~~VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll~-----------------------~~r~r~y~~~l~~~y~p 121 (243)
..|++.=+-+-+|+||..|++.+.+.|.+.+. +.+.+. +-|.+..+. +-
T Consensus 21 ~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~--~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~------lG 92 (308)
T 3op1_A 21 DSVVVLGYFDGIHKGHQELFRVANKAARKDLL--PIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKR------EG 92 (308)
T ss_dssp CEEEEESCCSSCCHHHHHHHHHHHHHSSTTCC--CEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHH------HT
T ss_pred CeEEEEecCCcccHHHHHHHHHHHHHHHhcCC--ceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHH------cC
Confidence 46888889999999999999977665544432 333221 333333322 22
Q ss_pred CCcEEEeeCCCCcCC--CCchHHHHHHHHHHhcCCcEeEecCCCC---CCCCcccccceeEEeCCCCeEeeeCCCCCccc
Q 046289 122 PETTVVSIFPSPMHY--AGPTEVQWHAKARINAGANFYIVGRDRA---GMGLESEYVKVAAYDKTQGKMAFFDPSRAQEF 196 (243)
Q Consensus 122 ~~~~~l~~lp~~mry--AGPrEal~hAiirkN~GcTHfIvGrdHA---G~g~~~~~~~~~~Y~~~~~~~~~~~~h~~~~~ 196 (243)
-|.+++ +|.+-.+ -.|.| ...-++ +.+++.+++||-|+. +-|+.. .++++ |+. +.....+... +-
T Consensus 93 VD~v~~--~~F~~~~a~ls~e~-Fv~~ll-~~l~~~~ivvG~DfrFG~r~G~~~-~L~~~--~~~--~V~~v~~~~~-~~ 162 (308)
T 3op1_A 93 VEELYL--LDFSSQFASLTAQE-FFATYI-KAMNAKIIVAGFDYTFGSDKKTAE-DLKNY--FDG--EVIIVPPVED-EK 162 (308)
T ss_dssp CCEEEE--ECCCHHHHTCCHHH-HHHHHH-HHHTEEEEEEETTCCBTTTTBCST-THHHH--CSS--EEEEECCCBC-SS
T ss_pred CCEEEE--ecCCHHHHcCCHHH-HHHHHH-HHcCCCEEEECcCCCCCCcCCCHH-HHHHh--CCC--CEEEeCCEec-CC
Confidence 355543 4544333 35644 444455 589999999999974 334322 33332 332 3333333311 22
Q ss_pred cccCHHHHHHHHhCCC
Q 046289 197 LFISGTKMRTLARNKE 212 (243)
Q Consensus 197 ~~iSgt~iR~~L~~G~ 212 (243)
..||+|.||++|++|.
T Consensus 163 ~~ISST~IR~~L~~G~ 178 (308)
T 3op1_A 163 GKISSTRIRQAILDGN 178 (308)
T ss_dssp CBCCHHHHHHHHHHTC
T ss_pred ceEeHHHHHHHHHcCC
Confidence 4699999999999997
No 32
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=95.64 E-value=0.044 Score=42.20 Aligned_cols=23 Identities=22% Similarity=0.394 Sum_probs=17.8
Q ss_pred cEEEeecCCCCcchHHHHHHHHH
Q 046289 66 AVFAFQRRKPVHNGHALLMTDTR 88 (243)
Q Consensus 66 ~VvafQTrnPlHraHe~l~~~~~ 88 (243)
.++..=+-||+|+||..|++.+.
T Consensus 3 ~~~~~G~FDp~H~GH~~li~~a~ 25 (129)
T 1coz_A 3 KVITYGTFDLLHWGHIKLLERAK 25 (129)
T ss_dssp EEEEEECCCSCCHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCHHHHHHHHHHH
Confidence 34555678999999999988653
No 33
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=95.02 E-value=0.064 Score=48.16 Aligned_cols=124 Identities=19% Similarity=0.165 Sum_probs=68.2
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEE----------------eh--HHHHHHHHHHHHcCCCCCCcEEEe
Q 046289 67 VFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIIL----------------LH--YWRMKQHDKVLEDGVLDPETTVVS 128 (243)
Q Consensus 67 VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~ll----------------l~--~~r~r~y~~~l~~~y~p~~~~~l~ 128 (243)
|++.=+-+.+|+||..|++.|.+.+.+.+.. .+++ |. +-|++.. + -+- .+++
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~-~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll----~--~lg--~~~v- 71 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDD-SLIYTISYPPEYFLPDFPGLLMTVESRVEML----S--RYA--RTVV- 71 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCC-CEEEEESSCGGGGSTTCCCBSSCHHHHHHHH----T--TTS--CEEE-
T ss_pred EEEEeeCccccHHHHHHHHHHHHHHHHcCCe-EEEEEecCCHHHhCCCCCCCCCCHHHHHHHH----H--hCC--CEEE-
Confidence 4555667899999999999887766554321 1111 11 4444433 2 121 2323
Q ss_pred eCCC-CcCCCCchHHHHHHHHHHhcCCcEeEecCCCC-C---CCCcccccceeEEeCCCCeEeeeCCCCCccccccCHHH
Q 046289 129 IFPS-PMHYAGPTEVQWHAKARINAGANFYIVGRDRA-G---MGLESEYVKVAAYDKTQGKMAFFDPSRAQEFLFISGTK 203 (243)
Q Consensus 129 ~lp~-~mryAGPrEal~hAiirkN~GcTHfIvGrdHA-G---~g~~~~~~~~~~Y~~~~~~~~~~~~h~~~~~~~iSgt~ 203 (243)
+|. .+.--.| |.....++ +++.+++||-|+. | .|+. +.+++ | .-+.....+.. .....||+|.
T Consensus 72 -~~F~~~a~ls~-~~Fi~~il---l~~~~iVvG~Df~fG~~~~g~~-~~L~~--~---G~~V~~v~~~~-~~~~~iSST~ 139 (293)
T 1mrz_A 72 -LDFFRIKDLTP-EGFVERYL---SGVSAVVVGRDFRFGKNASGNA-SFLRK--K---GVEVYEIEDVV-VQGKRVSSSL 139 (293)
T ss_dssp -ECHHHHTTCCH-HHHHHHHC---TTCCEEEEETTCCBSGGGCBCH-HHHHH--T---TCEEEEECCCE-ETTEECCHHH
T ss_pred -EEhHHhhcCCH-HHHHHHHh---cCCCEEEECCCCCCCCCCCCCH-HHHHh--C---CCEEEEECCEE-eCCccccHhH
Confidence 343 2222244 44455555 9999999999986 2 2221 12222 1 11222222221 1223699999
Q ss_pred HHHHHhCCC
Q 046289 204 MRTLARNKE 212 (243)
Q Consensus 204 iR~~L~~G~ 212 (243)
||++|++|.
T Consensus 140 IR~~L~~G~ 148 (293)
T 1mrz_A 140 IRNLVQEGR 148 (293)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHhcCc
Confidence 999999996
No 34
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=94.91 E-value=0.18 Score=46.63 Aligned_cols=156 Identities=19% Similarity=0.201 Sum_probs=84.3
Q ss_pred ccEEEeecCCCCcchHHHHHHHHHHHHHhcC---CCCCe--------EEeh-HHHHHHHHHHHHcCCCCCCcEEEeeCCC
Q 046289 65 DAVFAFQRRKPVHNGHALLMTDTRRRLLDMG---CQNPI--------ILLH-YWRMKQHDKVLEDGVLDPETTVVSIFPS 132 (243)
Q Consensus 65 ~~VvafQTrnPlHraHe~l~~~~~~~~~e~~---~~~~~--------lll~-~~r~r~y~~~l~~~y~p~~~~~l~~lp~ 132 (243)
+.|++.=.-||+|+||.+|++.+.+ .+.. +..+. .++. +.|.+-.+.+ | -|.++ .+|.
T Consensus 53 ~~v~~lG~FDg~H~GHq~lI~~a~~--~~~~~~Vms~~~~~vqrg~~~l~~~~~R~~~~~~~---G---vD~vi--elpF 122 (357)
T 3gmi_A 53 KIVCDFTEYNPLHKGHKYALEKGKE--HGIFISVLPGPLERSGRGIPYFLNRYIRAEMAIRA---G---ADIVV--EGPP 122 (357)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHHT--SSEEEEEECCTTSBCTTSSBCSSCHHHHHHHHHHH---T---CSEEE--ECCC
T ss_pred CEEEEEEecCccCHHHHHHHHHHHH--cCCeEEEEcCchHHhcCCCCcCCCHHHHHHHHHHC---C---CCEEE--EcCc
Confidence 5788899999999999999986533 1110 00000 0111 5555544332 2 24433 4565
Q ss_pred CcCCCCchHHHHHH-HHHHhcCCcEeEecCCCCCCCCccc---------------------cccee-------------E
Q 046289 133 PMHYAGPTEVQWHA-KARINAGANFYIVGRDRAGMGLESE---------------------YVKVA-------------A 177 (243)
Q Consensus 133 ~mryAGPrEal~hA-iirkN~GcTHfIvGrdHAG~g~~~~---------------------~~~~~-------------~ 177 (243)
.+. -.|-|-+-.| .+-+.+||.+++||- +.... +.. .+.+. -
T Consensus 123 ~~~-~s~~~Fv~~~v~ll~~l~~~~iv~G~-~~~~~-~~~~~~~i~~~~~~~~kp~~~~g~ey~~~~~~~l~~pn~il~~ 199 (357)
T 3gmi_A 123 MGI-MGSGQYMRCLIKMFYSLGAEIIPRGY-IPEKT-MEKVIDCINKGYHIQVKPYKIICIETGEILGEKLNIDNYVIAS 199 (357)
T ss_dssp GGG-SCHHHHHHHHHHHHHHHTCCEEEEEE-CCCHH-HHHHHHHHHTTCCEEEETTEEEETTTCCEEESCCCGGGHHHHH
T ss_pred hhh-CCHHHHHHHHHHHHHHcCCCEEEECC-CCchh-HHHHHHHHhcccccccccchhccCcHHHHHHHhccCCChHHHH
Confidence 433 4665543222 233689999999998 44332 211 11110 1
Q ss_pred EeCCCCeEee--eCCCCCc---ccc-ccCHHHHHHHHhCCC-CCCCCCcChhHHHHHHHHHhh
Q 046289 178 YDKTQGKMAF--FDPSRAQ---EFL-FISGTKMRTLARNKE-NPPDGFMCPGGWKVLVEYYDS 233 (243)
Q Consensus 178 Y~~~~~~~~~--~~~h~~~---~~~-~iSgt~iR~~L~~G~-~pP~~f~rpeV~~vl~~~~~~ 233 (243)
||+....+.+ ..++-.. .+. .+|+|.||+++.+|. ..=.-|+.+.++++|.+.++.
T Consensus 200 y~kai~~~~~~~~~~~i~~~~i~R~~~~SAS~IR~~i~~g~~~~~~~lVP~~t~~~l~~~~~~ 262 (357)
T 3gmi_A 200 MSQMIYKLNREGLKFNPKFVFVKRLEGISGTKIREAIFSGKFEDIKNMLPKTTLSILKELYDN 262 (357)
T ss_dssp HHHHHHHHHHTTCCCCCEEEEEECSCCCCHHHHHHHHHTTCGGGTGGGSCHHHHHHHHHHHHT
T ss_pred HHHHHHHhCcCcCCCCCeEEEecCCCcccHHHHHHHHHcCChhHHHhcCChHHHHHHHHHHhc
Confidence 1111111110 0011000 011 599999999999995 334558899999999988753
No 35
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=88.30 E-value=0.29 Score=42.41 Aligned_cols=45 Identities=11% Similarity=-0.012 Sum_probs=31.3
Q ss_pred ccccCHHHHHHHHhCCCCCCCCCcChhHHHHHHH--HHhhcCCCCCCC
Q 046289 196 FLFISGTKMRTLARNKENPPDGFMCPGGWKVLVE--YYDSLAPADNGK 241 (243)
Q Consensus 196 ~~~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~--~~~~~~~~~~~~ 241 (243)
...||+|.||+++++|..+ ..+..++|.+.|.+ .|+....++|..
T Consensus 197 ~~~ISST~IR~~~~~g~~i-~~lvP~~V~~yI~~~~LY~~~~~~~~~~ 243 (252)
T 1nup_A 197 QNEISATYIRRALGQGQSV-KYLIPDAVITYIKDHGLYTKGSTWKGKS 243 (252)
T ss_dssp CCCCCHHHHHHHHHTTCCC-BTTBCHHHHHHHHHTTCSCC--------
T ss_pred CCccCHHHHHHHHHcCCCc-hhcCCHHHHHHHHHcCCcCCCccCCCcc
Confidence 3579999999999999875 45888999999988 577655555543
No 36
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=88.07 E-value=0.28 Score=43.50 Aligned_cols=45 Identities=22% Similarity=0.096 Sum_probs=35.4
Q ss_pred cccCHHHHHHHHhCCCCCCCCCcChhHHHHHHHH--HhhcCCCCCCCC
Q 046289 197 LFISGTKMRTLARNKENPPDGFMCPGGWKVLVEY--YDSLAPADNGKV 242 (243)
Q Consensus 197 ~~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~~--~~~~~~~~~~~~ 242 (243)
..||+|+||++|++|+.+ ..+..++|.+-|.+. |+.....+|+.+
T Consensus 219 ~~ISST~IR~~l~~g~si-~~lvP~~V~~YI~~~~LY~~~~~~~~~~~ 265 (279)
T 1kqn_A 219 NDISSTKIRRALRRGQSI-RYLVPDLVQEYIEKHNLYSSESEDRNAGV 265 (279)
T ss_dssp CCCCHHHHHHHHHTTCCC-BTTBCHHHHHHHHHHTCCSHHHHTTTTTC
T ss_pred CccCHHHHHHHHHcCCCh-hhcCCHHHHHHHHHcCCcCCCcccCccce
Confidence 579999999999999765 568889999999884 666555555543
No 37
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=75.65 E-value=10 Score=34.55 Aligned_cols=78 Identities=22% Similarity=0.229 Sum_probs=48.3
Q ss_pred ccEEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeE--Eeh----------------HHHHHHHHHHHHcCCCCCCcEE
Q 046289 65 DAVFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPII--LLH----------------YWRMKQHDKVLEDGVLDPETTV 126 (243)
Q Consensus 65 ~~VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~l--ll~----------------~~r~r~y~~~l~~~y~p~~~~~ 126 (243)
++|++.=+-+|+|.||..++++|. +.+ +-| .++ +-|++..+++ . +. +.++
T Consensus 8 ~~v~~~G~FD~lH~GH~~lL~~A~----~l~---d~LiVgV~~d~~v~~~K~~pi~s~eER~~~l~~l-~--~V--D~Vv 75 (341)
T 3elb_A 8 VRVWCDGCYDMVHYGHSNQLRQAR----AMG---DYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAI-K--WV--DEVV 75 (341)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHH----HTS---SEEEEEECCHHHHHHHSSCCSSCHHHHHHHHHHB-T--TC--CEEE
T ss_pred eEEEEEeeCCCCCHHHHHHHHHHH----HhC---CcCEEEeecCHHHhccCCCCCCCHHHHHHHHHHc-C--CC--CEEE
Confidence 467778899999999999998653 332 222 222 5566655542 2 22 3333
Q ss_pred EeeCCCCcCCCCchHHHHHHHHHHhcCCcEeEecCCCCC
Q 046289 127 VSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDRAG 165 (243)
Q Consensus 127 l~~lp~~mryAGPrEal~hAiirkN~GcTHfIvGrdHAG 165 (243)
. .-|. .-|.|-+ +.++|..++.|-|+..
T Consensus 76 ~-f~~~----~~~~efi------~~~~~d~vV~G~D~~~ 103 (341)
T 3elb_A 76 P-AAPY----VTTLETL------DKYNCDFCVHGNDITL 103 (341)
T ss_dssp E-TCCS----SCCHHHH------HHTTCSEEEECSCCCB
T ss_pred e-cCCC----CCHHHHH------HHhCCCEEEECCCCCC
Confidence 2 1122 2344442 6899999999999873
No 38
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=63.05 E-value=3.9 Score=32.64 Aligned_cols=21 Identities=24% Similarity=0.324 Sum_probs=16.7
Q ss_pred eecCCCCcchHHHHHHHHHHH
Q 046289 70 FQRRKPVHNGHALLMTDTRRR 90 (243)
Q Consensus 70 fQTrnPlHraHe~l~~~~~~~ 90 (243)
-=|-||+|.||..+.+.|...
T Consensus 6 gGtFDPiH~GHl~l~~~a~~~ 26 (148)
T 3do8_A 6 GGTFEPLHEGHKKLIDVAIKL 26 (148)
T ss_dssp EECCSSCCHHHHHHHHHHHHH
T ss_pred EeeCCCCCHHHHHHHHHHHHh
Confidence 357899999999998876443
No 39
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=62.99 E-value=5.2 Score=31.24 Aligned_cols=118 Identities=11% Similarity=0.107 Sum_probs=48.5
Q ss_pred ccEEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeEEeh----------------HHHHHHHHHHHHcCCCCCCcEEEe
Q 046289 65 DAVFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPIILLH----------------YWRMKQHDKVLEDGVLDPETTVVS 128 (243)
Q Consensus 65 ~~VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~lll~----------------~~r~r~y~~~l~~~y~p~~~~~l~ 128 (243)
+++++.=+-||+|+||..|++.| .+.+ ....+.+. +-|++..+. .-+-|.+++.
T Consensus 3 ~~v~~~G~FD~vH~GH~~li~~a----~~~~-~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~-----~~~vd~v~~~ 72 (143)
T 3glv_A 3 IRVMATGVFDILHLGHIHYLKES----KKLG-DELVVVVARDSTARNNGKIPIFDENSRLALISE-----LKVVDRAILG 72 (143)
T ss_dssp CEEEEEECCSSCCHHHHHHHHHH----HTTS-SEEEEEECCHHHHHHTTCCCSSCHHHHHHHHTT-----BTTCSEEEEC
T ss_pred eEEEEEeecCCCCHHHHHHHHHH----HHhC-CCcEEEEECCcchhhcCCCCCCCHHHHHHHHHh-----cCCCCEEEEc
Confidence 45777788999999999998854 3332 01112222 344443322 1123444432
Q ss_pred eCCCCcCCCCchHHHHHHHHHHhcCCcEeEecCCCCCCCCcccccceeEEeCCC---CeEeeeCCCCCccccccCHHHHH
Q 046289 129 IFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDRAGMGLESEYVKVAAYDKTQ---GKMAFFDPSRAQEFLFISGTKMR 205 (243)
Q Consensus 129 ~lp~~mryAGPrEal~hAiirkN~GcTHfIvGrdHAG~g~~~~~~~~~~Y~~~~---~~~~~~~~h~~~~~~~iSgt~iR 205 (243)
.|.+- .. ++ +.+++.++++|-|.. - . ++.+.+ ++.+. -..++....+ -..+|+|.||
T Consensus 73 ---------~~~~f-~~-~~-~~l~~~~iv~G~d~~-f-~-~~~l~~--~~~~~g~~v~vv~~~~~~---~~~iSST~IR 132 (143)
T 3glv_A 73 ---------HEGDM-MK-TV-IEVKPDIITLGYDQK-F-D-EAELQS--KINKLGITVKIVRISKYD---GQLNSSSSVR 132 (143)
T ss_dssp ---------CTTCH-HH-HH-HHHCCSEEEECTTCH-H-H-HHHHHH--HHHHHTCCCEEEECCCCC-------------
T ss_pred ---------CchhH-HH-HH-HhcCCCEEEECCCCC-C-C-HHHHHH--HHHHcCCeEEEEEeeccC---CCcCCHHHHH
Confidence 23332 23 33 579999999999962 1 1 111111 11111 1122221111 3469999999
Q ss_pred HHHhCCC
Q 046289 206 TLARNKE 212 (243)
Q Consensus 206 ~~L~~G~ 212 (243)
++|.++.
T Consensus 133 ~~i~~~~ 139 (143)
T 3glv_A 133 KKIMELI 139 (143)
T ss_dssp -------
T ss_pred HHHHHHh
Confidence 9998753
No 40
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=49.88 E-value=12 Score=32.01 Aligned_cols=66 Identities=21% Similarity=0.172 Sum_probs=38.8
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCe---EE------------eh-HHHHHHHHHHHHcCCCCCCcEEEeeC
Q 046289 67 VFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPI---IL------------LH-YWRMKQHDKVLEDGVLDPETTVVSIF 130 (243)
Q Consensus 67 VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~---ll------------l~-~~r~r~y~~~l~~~y~p~~~~~l~~l 130 (243)
++..=|-||+|.||..|++.+...+-..+.. -+ ++ .. +-|++-.+..+++ .| .+.+ -
T Consensus 9 ~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~-~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~~ai~~--~~--~~~v--~ 81 (252)
T 1nup_A 9 LLACGSFNPITNMHLRMFEVARDHLHQTGMY-QVIQGIISPVNDTYGKKDLAASHHRVAMARLALQT--SD--WIRV--D 81 (252)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHTTSE-EEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGG--CS--SEEE--C
T ss_pred EEEEecCcHhhHHHHHHHHHHHHHhcccCCc-eEEEEEEeCCCCcccCCCCCCHHHHHHHHHHHhcC--CC--ceEe--e
Confidence 3445789999999999998776554321100 01 11 11 7899888887773 23 3333 3
Q ss_pred CCCcCCCCc
Q 046289 131 PSPMHYAGP 139 (243)
Q Consensus 131 p~~mryAGP 139 (243)
++...-.||
T Consensus 82 ~~E~~~~~~ 90 (252)
T 1nup_A 82 PWESEQAQW 90 (252)
T ss_dssp CHHHHSSSC
T ss_pred hHHhcCCCC
Confidence 444555565
No 41
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=47.21 E-value=14 Score=32.39 Aligned_cols=67 Identities=13% Similarity=0.081 Sum_probs=40.4
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCe---EE-eh------------HHHHHHHHHHHHcCCCCCCcEEEeeC
Q 046289 67 VFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPI---IL-LH------------YWRMKQHDKVLEDGVLDPETTVVSIF 130 (243)
Q Consensus 67 VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~---ll-l~------------~~r~r~y~~~l~~~y~p~~~~~l~~l 130 (243)
++..=|-||+|.||..|++.+...+-..+. ..+ ++ .+ +-|++-.+.+++ + . +.+ .+.
T Consensus 11 ~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~-~~vvv~~f~P~~~~~~K~~l~s~~~R~~ml~~ai~-~-~--~~~--~v~ 83 (279)
T 1kqn_A 11 LLACGSFNPITNMHLRLFELAKDYMNGTGR-YTVVKGIISPVGDAYKKKGLIPAYHRVIMAELATK-N-S--KWV--EVD 83 (279)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHTSS-EEEEEEEEEECCGGGCCTTCCCHHHHHHHHHHHTT-T-C--SSE--EEC
T ss_pred EEEEeeecHhhHHHHHHHHHHHHHhcccCC-ceEEEEEEcCCCCCccccCCCCHHHHHHHHHHHhc-C-C--CcE--EEe
Confidence 344578999999999999877554422110 001 11 11 778888887776 2 2 333 345
Q ss_pred CCCcCCCCch
Q 046289 131 PSPMHYAGPT 140 (243)
Q Consensus 131 p~~mryAGPr 140 (243)
+....-.|+.
T Consensus 84 ~~E~~~~~~s 93 (279)
T 1kqn_A 84 TWESLQKEWK 93 (279)
T ss_dssp CTGGGCSSCC
T ss_pred ccccccCCCC
Confidence 6666777774
No 42
>2l9z_A PR domain zinc finger protein 4; zinc-binding domain, transcription; NMR {Homo sapiens}
Probab=46.01 E-value=7.9 Score=24.65 Aligned_cols=21 Identities=10% Similarity=-0.036 Sum_probs=15.5
Q ss_pred eEEeCCCCeEee-eCC-CCCccc
Q 046289 176 AAYDKTQGKMAF-FDP-SRAQEF 196 (243)
Q Consensus 176 ~~Y~~~~~~~~~-~~~-h~~~~~ 196 (243)
+.||++|+++-+ .|| ||.-.+
T Consensus 11 yl~CE~C~~~~~~~Cp~HGP~~f 33 (39)
T 2l9z_A 11 TIWCTLCDRAYPSDCPEHGPVTF 33 (39)
T ss_dssp SEEEGGGTEEESSSBTTTBSCSC
T ss_pred hhHHHHHhhhchhhchhcCCCcc
Confidence 689999999855 598 455443
No 43
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=42.79 E-value=11 Score=33.67 Aligned_cols=19 Identities=32% Similarity=0.583 Sum_probs=15.9
Q ss_pred eecCCCCcchHHHHHHHHH
Q 046289 70 FQRRKPVHNGHALLMTDTR 88 (243)
Q Consensus 70 fQTrnPlHraHe~l~~~~~ 88 (243)
.=|-||+|.||..++++|.
T Consensus 8 ~GtFdP~h~GHl~~~~~a~ 26 (365)
T 1lw7_A 8 FGKFYPVHTGHINMIYEAF 26 (365)
T ss_dssp EECCSSCCHHHHHHHHHHH
T ss_pred EEeeCCCCHHHHHHHHHHH
Confidence 4688999999999987653
No 44
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=37.37 E-value=23 Score=24.86 Aligned_cols=41 Identities=12% Similarity=0.152 Sum_probs=25.3
Q ss_pred ccCHHHHHHHHhCCC--CCCCCCcChhHHHHHHHHHhhcCCCCCCCC
Q 046289 198 FISGTKMRTLARNKE--NPPDGFMCPGGWKVLVEYYDSLAPADNGKV 242 (243)
Q Consensus 198 ~iSgt~iR~~L~~G~--~pP~~f~rpeV~~vl~~~~~~~~~~~~~~~ 242 (243)
.||-++++.+|+.-. .+...++. +.+.+..+.++.+++|++
T Consensus 27 ~Is~~EL~~~l~~~~~~~lg~~~~~----~~v~~~~~~~D~d~dG~I 69 (92)
T 3rm1_A 27 KLKKSELKELINNELSHFLEEIKEQ----EVVDKVMETLDSNGDGEC 69 (92)
T ss_dssp SBCHHHHHHHHHHHCTTTSCCCCSH----HHHHHHHHHHCTTSSSSB
T ss_pred eECHHHHHHHHHHHhhhhccCcccH----HHHHHHHHHHcCCCCCCC
Confidence 589999999998611 11112233 344555556688888875
No 45
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=36.22 E-value=15 Score=26.30 Aligned_cols=41 Identities=7% Similarity=0.014 Sum_probs=24.9
Q ss_pred ccCHHHHHHHHhC--CCCCCCCCcChhHHHHHHHHHhhcCCCCCCCC
Q 046289 198 FISGTKMRTLARN--KENPPDGFMCPGGWKVLVEYYDSLAPADNGKV 242 (243)
Q Consensus 198 ~iSgt~iR~~L~~--G~~pP~~f~rpeV~~vl~~~~~~~~~~~~~~~ 242 (243)
.||-++++..|+. |..+..-.+..+| .+..+.++.+++|++
T Consensus 28 ~Is~~EL~~~l~~~lg~~l~~~~~~~ev----~~~i~~~D~d~DG~I 70 (93)
T 4eto_A 28 KLNKSELKELLTRELPSFLGKRTDEAAF----QKLMSNLDSNRDNEV 70 (93)
T ss_dssp SBCHHHHHHHHHHHCGGGC---CCHHHH----HHHHHHHCTTSSSSB
T ss_pred eECHHHHHHHHHHHhhhhccCCCCHHHH----HHHHHHHCCCCCCCC
Confidence 5999999999984 3222222233344 444555688888875
No 46
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=31.92 E-value=51 Score=23.87 Aligned_cols=41 Identities=20% Similarity=0.335 Sum_probs=27.6
Q ss_pred ccCHHHHHHHHhC--CCCCCCCCcChhHHHHHHHHHhhcCCCCCCCC
Q 046289 198 FISGTKMRTLARN--KENPPDGFMCPGGWKVLVEYYDSLAPADNGKV 242 (243)
Q Consensus 198 ~iSgt~iR~~L~~--G~~pP~~f~rpeV~~vl~~~~~~~~~~~~~~~ 242 (243)
.||-++|+.+|+. |..+.. +..-+.+.+..+.++.+++|++
T Consensus 30 ~Is~~EL~~~l~~~~~~~l~~----~~~~~ev~~~i~~~D~d~DG~I 72 (100)
T 3nxa_A 30 KISKSSFREMLQKELNHMLSD----TGNRKAADKLIQNLDANHDGRI 72 (100)
T ss_dssp CBCHHHHHHHHHHHSTTTTCS----SHHHHHHHHHHHHSCCCSSCCB
T ss_pred eEcHHHHHHHHHHHccccccc----cccHHHHHHHHHHhCCCCCCCC
Confidence 5999999999974 333333 2223455666666788888876
No 47
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=30.52 E-value=48 Score=24.33 Aligned_cols=41 Identities=7% Similarity=0.068 Sum_probs=25.7
Q ss_pred ccCHHHHHHHHhC--CCCCCCCCcChhHHHHHHHHHhhcCCCCCCCC
Q 046289 198 FISGTKMRTLARN--KENPPDGFMCPGGWKVLVEYYDSLAPADNGKV 242 (243)
Q Consensus 198 ~iSgt~iR~~L~~--G~~pP~~f~rpeV~~vl~~~~~~~~~~~~~~~ 242 (243)
.||-.+|+.+|+. |..+..-.+..+ +.+..+.++.+++|++
T Consensus 31 ~Is~~EL~~~l~~~lg~~l~~~~~~~e----v~~~i~~~D~dgDG~I 73 (104)
T 3zwh_A 31 KLNKSELKELLTRELPSWLGKRTDEAA----FQKLMSNLDSNRDNEV 73 (104)
T ss_dssp SBCHHHHHHHHHHHCGGGSCSSCCHHH----HHHHHHHHCTTCSSSB
T ss_pred eECHHHHHHHHHHHcchhccCCCCHHH----HHHHHHHHcCCCCCCC
Confidence 5999999999984 322222223344 4444555688888875
No 48
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=27.20 E-value=39 Score=24.76 Aligned_cols=36 Identities=17% Similarity=0.302 Sum_probs=23.7
Q ss_pred ccCHHHHHHHHhCCCCCCCCCcChhHHHHHHHHHhhcCCCCCCCC
Q 046289 198 FISGTKMRTLARNKENPPDGFMCPGGWKVLVEYYDSLAPADNGKV 242 (243)
Q Consensus 198 ~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~~~~~~~~~~~~~~ 242 (243)
.||..+++..|+ |..++ ..++ .+.++..+.+++|++
T Consensus 30 ~I~~~El~~~l~-~~~~~----~~~~----~~i~~~~D~d~dG~I 65 (111)
T 2kgr_A 30 HLTGPQARTILM-QSSLP----QAQL----ASIWNLSDIDQDGKL 65 (111)
T ss_dssp EEEHHHHHHHHH-TTCCC----HHHH----HHHHHHHCSSCCSEE
T ss_pred cCcHHHHHHHHH-hCCCC----HHHH----HHHHHHHCCCCCCCC
Confidence 599999999998 55433 3344 444455677777754
No 49
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=27.19 E-value=56 Score=23.99 Aligned_cols=38 Identities=11% Similarity=0.056 Sum_probs=25.1
Q ss_pred ccCHHHHHHHHhC--CCCCCCCCcChhHHHHHHHHHhhcCCCCCCCC
Q 046289 198 FISGTKMRTLARN--KENPPDGFMCPGGWKVLVEYYDSLAPADNGKV 242 (243)
Q Consensus 198 ~iSgt~iR~~L~~--G~~pP~~f~rpeV~~vl~~~~~~~~~~~~~~~ 242 (243)
.||-++|+..|+. |...|+ ..+|.+++.+ ++.+++|+|
T Consensus 40 ~Is~~EL~~~l~~~lg~~~~~---~~ev~~li~~----~D~d~dG~I 79 (106)
T 2h2k_A 40 SLSVNEFKELVTQQLPHLLKD---VGSLDEKMKS----LDVNQDSEL 79 (106)
T ss_dssp EECHHHHHHHHHHHCTTTTTT---CCCHHHHHHH----HCTTCSSSE
T ss_pred EECHHHHHHHHHHHcCcCCCC---HHHHHHHHHH----HCCCCCCCC
Confidence 5999999999974 654442 1455555544 477777764
No 50
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=26.85 E-value=26 Score=26.70 Aligned_cols=45 Identities=9% Similarity=0.166 Sum_probs=26.3
Q ss_pred ccCHHHHHHHHhC-----CCCCCCCCcChhHHHHHHHHHhhcCCCCCCCC
Q 046289 198 FISGTKMRTLARN-----KENPPDGFMCPGGWKVLVEYYDSLAPADNGKV 242 (243)
Q Consensus 198 ~iSgt~iR~~L~~-----G~~pP~~f~rpeV~~vl~~~~~~~~~~~~~~~ 242 (243)
.||-.+++.++.. |..+++.++.....+.+.+.++.++.+++|++
T Consensus 108 ~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i 157 (183)
T 1s6c_A 108 YINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIV 157 (183)
T ss_dssp CEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEE
T ss_pred eEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcE
Confidence 4899999999876 87765555554444666777777788888865
No 51
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=25.95 E-value=57 Score=24.85 Aligned_cols=41 Identities=17% Similarity=0.163 Sum_probs=26.2
Q ss_pred ccCHHHHHHHHhCCC--CCCCCCcChhHHHHHHHHHhhcCCCCCCCC
Q 046289 198 FISGTKMRTLARNKE--NPPDGFMCPGGWKVLVEYYDSLAPADNGKV 242 (243)
Q Consensus 198 ~iSgt~iR~~L~~G~--~pP~~f~rpeV~~vl~~~~~~~~~~~~~~~ 242 (243)
.||-.+++++|+.-. .+....+..+|.++ .+.++.+++|++
T Consensus 30 ~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~----i~~~D~d~DG~I 72 (121)
T 4drw_A 30 YLTKEDLRVLMEKEFPGFLENQKDPLAVDKI----MKDLDQCRDGKV 72 (121)
T ss_dssp SCCHHHHHHHTTTSCHHHHTTSSCTTHHHHH----HHHHCTTCSSCC
T ss_pred EEcHHHHHHHHHHHhhhhcccCCCHHHHHHH----HHHHcCCCCCcC
Confidence 699999999998621 12223344444444 455688888876
No 52
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=25.63 E-value=51 Score=23.73 Aligned_cols=37 Identities=24% Similarity=0.237 Sum_probs=25.9
Q ss_pred ccCHHHHHHHHhC-CCCCCCCCcChhHHHHHHHHHhhcCCCCCCCC
Q 046289 198 FISGTKMRTLARN-KENPPDGFMCPGGWKVLVEYYDSLAPADNGKV 242 (243)
Q Consensus 198 ~iSgt~iR~~L~~-G~~pP~~f~rpeV~~vl~~~~~~~~~~~~~~~ 242 (243)
.||-.+++..|+. |..+ +..|+.+++ +.++.+++|++
T Consensus 52 ~I~~~El~~~l~~lg~~~----~~~ei~~l~----~~~D~d~dG~I 89 (100)
T 2lv7_A 52 FISKQELGTAMRSLGYMP----NEVELEVII----QRLDMDGDGQV 89 (100)
T ss_dssp CBCHHHHHHHHHHHTCCC----CTTTHHHHH----HHHCSSCSSSB
T ss_pred cCCHHHHHHHHHHhCCCC----CHHHHHHHH----HHHCCCCCCeE
Confidence 5999999998886 6554 345555554 44578888875
No 53
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=23.85 E-value=51 Score=28.51 Aligned_cols=115 Identities=17% Similarity=0.095 Sum_probs=61.6
Q ss_pred ccEEEeecCCCCcchHHHHHHHHHHHHHhcCCCCCeE--Eeh----------------HHHHHHHHHHHHcCCCCCCcEE
Q 046289 65 DAVFAFQRRKPVHNGHALLMTDTRRRLLDMGCQNPII--LLH----------------YWRMKQHDKVLEDGVLDPETTV 126 (243)
Q Consensus 65 ~~VvafQTrnPlHraHe~l~~~~~~~~~e~~~~~~~l--ll~----------------~~r~r~y~~~l~~~y~p~~~~~ 126 (243)
.+|+.-=|-+|+|.||..++++|. +. |.++-| .++ +-|++..+++ . +. +.++
T Consensus 77 ~~V~~~GtFD~~H~GHl~iL~rAk----~l-f~gD~LIVgV~~D~~v~~~Kg~pi~s~eER~e~v~~~-k--~V--D~Vv 146 (236)
T 3hl4_A 77 VRVYADGIFDLFHSGHARALMQAK----NL-FPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHC-R--YV--DEVV 146 (236)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHH----TS-SSSEEEEEEECCHHHHHHHTCCCSSCHHHHHHHHHTB-T--TC--SEEE
T ss_pred eEEEEeccCCCCCHHHHHHHHHHH----Hh-cCCCeEEEEEcccHHHhhcCCCCCCCHHHHHHHHHHh-C--CC--CeEE
Confidence 357778999999999999988653 22 111322 233 5566655542 2 22 4454
Q ss_pred EeeCCCCcCCCCchHHHHHHHHHHhcCCcEeEecCCC-CCCC--CcccccceeEEeCCCCeEeeeCCCCCccccccCHHH
Q 046289 127 VSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDR-AGMG--LESEYVKVAAYDKTQGKMAFFDPSRAQEFLFISGTK 203 (243)
Q Consensus 127 l~~lp~~mryAGPrEal~hAiirkN~GcTHfIvGrdH-AG~g--~~~~~~~~~~Y~~~~~~~~~~~~h~~~~~~~iSgt~ 203 (243)
+. -|+.. ... .-+.+||+.++.|-|. .+.+ +.|+.+ ++-+.+... + .+..+|.|.
T Consensus 147 v~-~p~~l-----~~d-----~i~~~~~d~Vv~GDd~~~~~~~~d~y~~l------k~~G~~~~v-~----rt~giSTT~ 204 (236)
T 3hl4_A 147 RN-APWTL-----TPE-----FLAEHRIDFVAHDDIPYSSAGSDDVYKHI------KEAGMFAPT-Q----RTEGISTSD 204 (236)
T ss_dssp SS-CCSSC-----CHH-----HHHHTTCCEEEEESSCCCCSSCSCTTHHH------HHTTCEEEE-C----CCTTCCHHH
T ss_pred EC-CcCcC-----cHH-----HHHHcCCCEEEECCccccCCCchhHHHHH------HhCCeEEEe-c----cCCCCCHHH
Confidence 32 23221 111 1247899988888763 2222 112222 222333222 1 112499999
Q ss_pred HHHHHhCC
Q 046289 204 MRTLARNK 211 (243)
Q Consensus 204 iR~~L~~G 211 (243)
|.+++.++
T Consensus 205 Ii~RI~~~ 212 (236)
T 3hl4_A 205 IITRIVRD 212 (236)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99887765
No 54
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=22.10 E-value=72 Score=23.30 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=24.7
Q ss_pred ccCHHHHHHHHhC--CCCCCCCCcChhHHHHHHHHHhhcCCCCCCCC
Q 046289 198 FISGTKMRTLARN--KENPPDGFMCPGGWKVLVEYYDSLAPADNGKV 242 (243)
Q Consensus 198 ~iSgt~iR~~L~~--G~~pP~~f~rpeV~~vl~~~~~~~~~~~~~~~ 242 (243)
.||-++|+.+|+. |..+-.-.+..+|-+++.+ ++.+++|+|
T Consensus 28 ~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~----~D~dgDG~I 70 (101)
T 3nso_A 28 KLCQAELKELLQKELATWTPTEFRECDYNKFMSV----LDTNKDCEV 70 (101)
T ss_dssp EECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHH----HHHCCCSCE
T ss_pred EECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHH----hCCCCCCCC
Confidence 6999999999974 2211222344555555554 466677654
No 55
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=21.18 E-value=1e+02 Score=20.01 Aligned_cols=44 Identities=7% Similarity=0.125 Sum_probs=30.3
Q ss_pred ccCHHHHHHHHhCCCCCCCCCcChhHHHHHHHHHhhcCCCCCCCC
Q 046289 198 FISGTKMRTLARNKENPPDGFMCPGGWKVLVEYYDSLAPADNGKV 242 (243)
Q Consensus 198 ~iSgt~iR~~L~~G~~pP~~f~rpeV~~vl~~~~~~~~~~~~~~~ 242 (243)
.||..+++..++.--. ...++..++.+++.+.++..+.+++|++
T Consensus 23 ~i~~~el~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~dg~I 66 (83)
T 1yx7_A 23 YVTALELQTFMVTLDA-YKALSKDKVKEASAKLIKMADKNSDGKI 66 (83)
T ss_dssp SCSHHHHHHHHHHHTT-CTTTTTTTTHHHHHHHHTTTCSSSCSCC
T ss_pred cCcHHHHHHHHHHHcc-ccCCCHHHHHHHHHHHHHHhCCCCCCCC
Confidence 5899999988875210 1224455666766667888888888876
No 56
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=20.01 E-value=90 Score=23.28 Aligned_cols=41 Identities=10% Similarity=0.047 Sum_probs=24.4
Q ss_pred ccCHHHHHHHHhC--CCCCCCCCcChhHHHHHHHHHhhcCCCCCCCC
Q 046289 198 FISGTKMRTLARN--KENPPDGFMCPGGWKVLVEYYDSLAPADNGKV 242 (243)
Q Consensus 198 ~iSgt~iR~~L~~--G~~pP~~f~rpeV~~vl~~~~~~~~~~~~~~~ 242 (243)
.||-++|+.+|+. |..+-.-.+..+|.+++. .++.+++|+|
T Consensus 40 ~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~----~~D~dgdG~I 82 (113)
T 2lnk_A 40 KLNKSELKELLTRELPSFLGKRTDEAAFQKLMS----NLDSNRDNEV 82 (113)
T ss_dssp CBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHH----HHCSSSSSCB
T ss_pred EECHHHHHHHHHHHcchhcCCCCCHHHHHHHHH----HhCCCCCCcE
Confidence 5999999999964 211111123345555554 4577777765
Done!