BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046290
(197 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein OS=Arabidopsis thaliana
GN=At3g01520 PE=1 SV=2
Length = 175
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 28 GKKKMKVMVAIDESA---------ESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQ 78
G + KVMVA++ S A +W L+ + + + ++HVQ
Sbjct: 2 GSEPTKVMVAVNASTIKDYPNPSISCKRAFEWTLEKIV-------RSNTSDFKILLLHVQ 54
Query: 79 EPFQRFVLPALSTSSAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLEG 138
+ + YA+ +R+S + LL + C + V E+ + G
Sbjct: 55 VVDED----GFDDVDSIYASPEDFRDMRQSNKAKGLHLLEFFVNKCHEIGVGCEAWIKTG 110
Query: 139 DPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
DPKD+ICQ +++ D LVVGSRGLG+ ++ F+G+VS +C HA CP++ +K
Sbjct: 111 DPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIK 162
>sp|P42297|YXIE_BACSU Universal stress protein YxiE OS=Bacillus subtilis (strain 168)
GN=yxiE PE=3 SV=1
Length = 148
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 33 KVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTS 92
K++VAID S S AL A V E L+I+HV + V+ S +
Sbjct: 4 KMLVAIDGSDMSAKALDAA-------VHLAKEQQAE---LSILHVG---REAVVTTSSLT 50
Query: 93 SAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLEGDPKDMICQSAEQMH 152
Y ++ +R ++ +L A + +K V+AE++ G+P I A++
Sbjct: 51 GIVYVPEHFIDEIRNEVKKEGLKILENAKEKAAEKGVQAETIYANGEPAHEILNHAKEKG 110
Query: 153 IDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
+ L+VVGSRG+ +K LGSVS + + CP++IV+
Sbjct: 111 VSLIVVGSRGISGLKEMMLGSVSHKVSQLSTCPVLIVR 148
>sp|Q57951|Y531_METJA Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0531 PE=3 SV=1
Length = 170
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 109 QEENSAALLSRALQMCKDKMVKAESLVLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKR 168
+EE AL + +M ++ VK + +LEG P + I + AE+ DL+V+G+ G ++R
Sbjct: 85 KEEGQEAL-KKVKKMAEEWGVKIHTEMLEGVPANEIVEFAEKKKADLIVMGTTGKTGLER 143
Query: 169 AFLGSVSDYCAHHAVCPIIIVKPPKEQ 195
LGSV++ +A CP+++VK PK++
Sbjct: 144 ILLGSVAERVIKNAHCPVLVVKKPKKE 170
>sp|P74148|Y1388_SYNY3 Universal stress protein Sll1388 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1388 PE=3 SV=1
Length = 154
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 89 LSTSSAFYAT-----SSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLEGDPKDM 143
LS +FY S +++ + Q+ + L +Q ++ V E V G+P
Sbjct: 47 LSIYPSFYGEAAIGFSQIIKEHLEEQQTEAREWLQSIVQQVQEDGVACEWDVKVGEPGRW 106
Query: 144 ICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
I A+ DL+V+G RGL + FLGSVS Y HH C ++IV+
Sbjct: 107 IRDMAKNWDADLVVLGRRGLKGLAEVFLGSVSSYVIHHVQCSVLIVQ 153
>sp|P74897|YQA3_THEAQ Universal stress protein in QAH/OAS sulfhydrylase 3'region
OS=Thermus aquaticus PE=3 SV=1
Length = 137
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 69 GGILTIVHVQEPFQRFVLPALSTSSAFYATSSMVESVRKSQEENSAALLSRALQMCKDKM 128
G L +VH EP ++ F+ E++++ E RA M +
Sbjct: 30 GARLLVVHAYEPVPDYL------GEPFFE-----EALKRRLERAEKV---RAEAMALTGV 75
Query: 129 VKAESLVLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIII 188
+ ++L+L+G P + I Q+A DL+V+G+RGLG + FLGS S A CP+++
Sbjct: 76 PREDALLLQGRPAEAILQAAIGEKADLIVMGTRGLGAVGSLFLGSQSQKVVAEAPCPVLL 135
Query: 189 VK 190
V+
Sbjct: 136 VR 137
>sp|P72745|Y1101_SYNY3 Universal stress protein Slr1101 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1101 PE=3 SV=1
Length = 108
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 126 DKMVKAESLVLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCP 185
D +AE ++ G P +ICQ A+Q + D++VVG RG + LGSV +Y HHA C
Sbjct: 43 DIECQAEQIL--GSPGKIICQRAKQDNSDIIVVGHRGRWGLSEILLGSVGNYVFHHAHCC 100
Query: 186 IIIVKPP 192
+ +V P
Sbjct: 101 VFVVPTP 107
>sp|O07552|NHAX_BACSU Stress response protein NhaX OS=Bacillus subtilis (strain 168)
GN=nhaX PE=2 SV=2
Length = 166
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 33 KVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQE--PFQRFVLPALS 90
+++VA D S S AL A+D A +T+ H + Q + P
Sbjct: 6 RIIVAFDGSENSKKALLTAID----------LAKTVNAAITVAHSHDMKDNQTVIDPPRP 55
Query: 91 TSSAFYATSSM-------VESVRKSQ----EENSAALLSRALQMCKDKMVKAESLVLEGD 139
+ A Y + M + V + E+ + +++ A M ++ + +LEGD
Sbjct: 56 AAEASYISGGMTSVPDPLISDVTSPEPMIYEDRTEEVIAEARMMLNEQQADGDIDILEGD 115
Query: 140 PKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
P + I + A ++ D++V GSR ++K+ GSVS+ + + P++IVK
Sbjct: 116 PAESIIEHANRISADMIVTGSRDQNRLKKLIFGSVSEKLSAKSDIPVLIVK 166
>sp|A0QZA1|Y3950_MYCS2 Universal stress protein MSMEG_3950/MSMEI_3859 OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_3950
PE=1 SV=1
Length = 294
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 30/171 (17%)
Query: 25 MTDGKKKMKVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRF 84
M + ++V +D SAES A++WA EA +T++HV P
Sbjct: 1 MVQSATEYGILVGVDSSAESDAAVRWA----------AREASLHDAPITLMHVIAPV--- 47
Query: 85 VLPALSTSSAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLEGDPKDMI 144
+S + Y + +V + QEEN+ + +A ++ D + + L ++ + +
Sbjct: 48 ---VVSWPAGPY-----MATVLECQEENARHAIEQAQKVVADCLGETHGLTVQTEIRK-- 97
Query: 145 CQSAEQMHID------LLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIV 189
+S + ID ++VVG+RG+G + R LGS S H+A P+++V
Sbjct: 98 -ESVARTLIDASKSAQMVVVGNRGMGALGRVLLGSTSTSLLHYASGPVVVV 147
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 109 QEENSAALLSRALQMCKDKM--VKAESLVLEGDPKDMICQSAEQMHIDLLVVGSRGLGKI 166
QEE ALL+ L +++ VK V P + + A+Q L+VVGS G G
Sbjct: 211 QEETGRALLAERLAGWQERYPDVKVHRRVERAQPAYWLLEEAKQAQ--LVVVGSHGRGGF 268
Query: 167 KRAFLGSVSDYCAHHAVCPIIIVKP 191
LGSVS A A P+++V+P
Sbjct: 269 TGMLLGSVSSRVAQSATTPVMVVRP 293
>sp|Q2FXL6|Y1819_STAA8 Putative universal stress protein SAOUHSC_01819 OS=Staphylococcus
aureus (strain NCTC 8325) GN=SAOUHSC_01819 PE=3 SV=1
Length = 166
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 33 KVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTS 92
+++A+D S E+ +WA + G+ A LTIV+V + + + S
Sbjct: 6 NILIAVDGSHEA----EWAFNRAVGV------AKRNDAKLTIVNV--------IDSRTYS 47
Query: 93 SAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLE-GDPKDMICQS-AEQ 150
S + E + EE LL+ ++ + VK LE G PK +I + A +
Sbjct: 48 SYEVYDAQFTEKSKHFAEE----LLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHE 103
Query: 151 MHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
++ DL++ G+ GL ++R +GSVS+ HA C +++V+
Sbjct: 104 INADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q6GFZ7|Y1788_STAAR Putative universal stress protein SAR1788 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR1788 PE=3 SV=1
Length = 166
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 33 KVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTS 92
+++A+D S E+ +WA + G+ A LTIV+V + + + S
Sbjct: 6 NILIAVDGSHEA----EWAFNRAVGV------AKRNDAKLTIVNV--------IDSRTYS 47
Query: 93 SAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLE-GDPKDMICQS-AEQ 150
S + E + EE LL+ ++ + VK LE G PK +I + A +
Sbjct: 48 SYEVYDAQFTEKSKHFAEE----LLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHE 103
Query: 151 MHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
++ DL++ G+ GL ++R +GSVS+ HA C +++V+
Sbjct: 104 INADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q5HF64|Y1759_STAAC Putative universal stress protein SACOL1759 OS=Staphylococcus
aureus (strain COL) GN=SACOL1759 PE=3 SV=1
Length = 166
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 33 KVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTS 92
+++A+D S E+ +WA + G+ A LTIV+V + + + S
Sbjct: 6 NILIAVDGSHEA----EWAFNRAVGV------AKRNDAKLTIVNV--------IDSRTYS 47
Query: 93 SAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLE-GDPKDMICQS-AEQ 150
S + E + EE LL+ ++ + VK LE G PK +I + A +
Sbjct: 48 SYEVYDAQFTEKSKHFAEE----LLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHE 103
Query: 151 MHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
++ DL++ G+ GL ++R +GSVS+ HA C +++V+
Sbjct: 104 INADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q99TF3|Y1710_STAAM Putative universal stress protein SAV1710 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV1710 PE=1 SV=1
Length = 166
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 33 KVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTS 92
+++A+D S E+ +WA + G+ A LTIV+V + + + S
Sbjct: 6 NILIAVDGSHEA----EWAFNRAVGV------AKRNDAKLTIVNV--------IDSRTYS 47
Query: 93 SAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLE-GDPKDMICQS-AEQ 150
S + E + EE LL+ ++ + VK LE G PK +I + A +
Sbjct: 48 SYEVYDAQFTEKSKHFAEE----LLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHE 103
Query: 151 MHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
++ DL++ G+ GL ++R +GSVS+ HA C +++V+
Sbjct: 104 INADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q2FG28|Y1656_STAA3 Putative universal stress protein SAUSA300_1656 OS=Staphylococcus
aureus (strain USA300) GN=SAUSA300_1656 PE=3 SV=1
Length = 166
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 33 KVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTS 92
+++A+D S E+ +WA + G+ A LTIV+V + + + S
Sbjct: 6 NILIAVDGSHEA----EWAFNRAVGV------AKRNDAKLTIVNV--------IDSRTYS 47
Query: 93 SAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLE-GDPKDMICQS-AEQ 150
S + E + EE LL+ ++ + VK LE G PK +I + A +
Sbjct: 48 SYEVYDAQFTEKSKHFAEE----LLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHE 103
Query: 151 MHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
++ DL++ G+ GL ++R +GSVS+ HA C +++V+
Sbjct: 104 INADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q7A0N0|Y1653_STAAW Putative universal stress protein MW1653 OS=Staphylococcus aureus
(strain MW2) GN=MW1653 PE=3 SV=1
Length = 166
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 33 KVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTS 92
+++A+D S E+ +WA + G+ A LTIV+V + + + S
Sbjct: 6 NILIAVDGSHEA----EWAFNRAVGV------AKRNDAKLTIVNV--------IDSRTYS 47
Query: 93 SAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLE-GDPKDMICQS-AEQ 150
S + E + EE LL+ ++ + VK LE G PK +I + A +
Sbjct: 48 SYEVYDAQFTEKSKHFAEE----LLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHE 103
Query: 151 MHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
++ DL++ G+ GL ++R +GSVS+ HA C +++V+
Sbjct: 104 INADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q6G8L7|Y1637_STAAS Putative universal stress protein SAS1637 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS1637 PE=3 SV=1
Length = 166
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 33 KVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTS 92
+++A+D S E+ +WA + G+ A LTIV+V + + + S
Sbjct: 6 NILIAVDGSHEA----EWAFNRAVGV------AKRNDAKLTIVNV--------IDSRTYS 47
Query: 93 SAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLE-GDPKDMICQS-AEQ 150
S + E + EE LL+ ++ + VK LE G PK +I + A +
Sbjct: 48 SYEVYDAQFTEKSKHFAEE----LLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHE 103
Query: 151 MHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
++ DL++ G+ GL ++R +GSVS+ HA C +++V+
Sbjct: 104 INADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q2YTD0|Y1569_STAAB Putative universal stress protein SAB1569 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB1569 PE=3 SV=1
Length = 166
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 33 KVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTS 92
+++A+D S E+ +WA + G+ A LTIV+V + + + S
Sbjct: 6 NILIAVDGSHEA----EWAFNRAVGV------AKRNDAKLTIVNV--------IDSRTYS 47
Query: 93 SAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLE-GDPKDMICQS-AEQ 150
S + E + EE LL+ ++ + VK LE G PK +I + A +
Sbjct: 48 SYEVYDAQFTEKSKHFAEE----LLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHE 103
Query: 151 MHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
++ DL++ G+ GL ++R +GSVS+ HA C +++V+
Sbjct: 104 INADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q7A551|Y1532_STAAN Putative universal stress protein SA1532 OS=Staphylococcus aureus
(strain N315) GN=SA1532 PE=1 SV=1
Length = 166
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 33 KVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTS 92
+++A+D S E+ +WA + G+ A LTIV+V + + + S
Sbjct: 6 NILIAVDGSHEA----EWAFNRAVGV------AKRNDAKLTIVNV--------IDSRTYS 47
Query: 93 SAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLE-GDPKDMICQS-AEQ 150
S + E + EE LL+ ++ + VK LE G PK +I + A +
Sbjct: 48 SYEVYDAQFTEKSKHFAEE----LLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHE 103
Query: 151 MHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
++ DL++ G+ GL ++R +GSVS+ HA C +++V+
Sbjct: 104 INADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q50777|Y1538_METTM Universal stress protein MTBMA_c15380 OS=Methanothermobacter
marburgensis (strain DSM 2133 / 14651 / NBRC 100331 /
OCM 82 / Marburg) GN=MTBMA_c15380 PE=3 SV=1
Length = 143
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 72 LTIVHVQEPFQRFVLPALSTSSAFYATSSMVESVRKSQEENSAALL---SRALQMCKDKM 128
L ++H +E + L + TS F + E + K E +L + L ++
Sbjct: 22 LDLLHGREA-EVICLYVVDTSVPFLTPKKVKEMMVKELTERGKEILRDMEKGLTGPENPN 80
Query: 129 VKAESLVLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIII 188
VK ++LEG+P D I + AE+ +D++++G+ G + + LGSVS+ H+A C I +
Sbjct: 81 VKFRGVMLEGNPADEIVKLAEEEDVDVIIMGT-GKSLVDKHLLGSVSEKVVHYAPCTIHL 139
Query: 189 VK 190
V+
Sbjct: 140 VR 141
>sp|Q8CS61|Y1385_STAES Putative universal stress protein SE_1385 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_1385 PE=3 SV=1
Length = 166
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 24/160 (15%)
Query: 33 KVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTS 92
+++A+D S E+ +WA + G+ A LTIV+V + + + S
Sbjct: 6 NILIAVDGSHEA----EWAFNKAVGV------AKRNDAQLTIVNV--------IDSRTYS 47
Query: 93 SAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLE-GDPKDMICQS-AEQ 150
S + E + EE LL ++ + VK LE G PK +I + A
Sbjct: 48 SYEVYDAQFTEKSKHFSEE----LLKGYKEVATNAGVKNVDTRLEFGSPKAIIPKKLARD 103
Query: 151 MHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
+ DL++ G+ GL ++R +GSVS+ HA C +++V+
Sbjct: 104 VGADLIMSGTSGLNAVERFIVGSVSEAIVRHAPCDVLVVR 143
>sp|Q5HNJ5|Y1273_STAEQ Putative universal stress protein SERP1273 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=SERP1273 PE=3
SV=1
Length = 166
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 24/160 (15%)
Query: 33 KVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTS 92
+++A+D S E+ +WA + G+ A LTIV+V + + + S
Sbjct: 6 NILIAVDGSHEA----EWAFNKAVGV------AKRNDAQLTIVNV--------IDSRTYS 47
Query: 93 SAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLE-GDPKDMICQS-AEQ 150
S + E + EE LL ++ + VK LE G PK +I + A
Sbjct: 48 SYEVYDAQFTEKSKHFSEE----LLKGYKEVATNAGVKNVDTRLEFGSPKAIIPKKLARD 103
Query: 151 MHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
+ DL++ G+ GL ++R +GSVS+ HA C +++V+
Sbjct: 104 VGADLIMSGTSGLNAVERFIVGSVSEAIVRHAPCDVLVVR 143
>sp|Q4L751|Y1215_STAHJ Putative universal stress protein SH1215 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=SH1215 PE=3 SV=1
Length = 165
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 26/161 (16%)
Query: 33 KVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTS 92
+++A+D S E+ +WA + + A LTIV++ + + + S
Sbjct: 6 NILIAVDGSHEA----EWAFNKAVDV------AKRNDAKLTIVNI--------IDSRTYS 47
Query: 93 SAFYATSSMVESVRKSQEENSAALLSRALQMCKDK--MVKAESLVLEGDPKDMICQS-AE 149
S + E R EE L + Q + + E+ + G PK +I + A
Sbjct: 48 SYEVYDAQFTEKSRSFSEE-----LLKGYQEVATRAGVTNVETRLEFGSPKAIIPKKLAS 102
Query: 150 QMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
++ +DL++ G+ GL ++R +GSVS+ HA C +++V+
Sbjct: 103 ELGVDLIMCGTSGLNAVERFIVGSVSEAIVRHAPCDVLVVR 143
>sp|O06189|Y2623_MYCTU Universal stress protein Rv2623/MT2698 OS=Mycobacterium
tuberculosis GN=Rv2623 PE=1 SV=1
Length = 297
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 40/176 (22%)
Query: 25 MTDGKKKMKVMVAIDESAESFNALKWALDN--LYGIVGFTPEAGGGGGILTIVHVQEPFQ 82
M+ G + ++V ID+S + A++WA + L I LT+VH
Sbjct: 1 MSSGNSSLGIIVGIDDSPAAQVAVRWAARDAELRKIP------------LTLVH------ 42
Query: 83 RFVLPALSTSSAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLEGDP-- 140
A+S A + + V + Q+++ L+ AL++ + ++A G P
Sbjct: 43 -----AVSPEVATWLEVPLPPGVLRWQQDHGRHLIDDALKVVEQASLRA------GPPTV 91
Query: 141 -KDMICQSAEQMHID------LLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIV 189
+++ +A +D L+VVG G G+ LGSVS HA CP++I+
Sbjct: 92 HSEIVPAAAVPTLVDMSKDAVLMVVGCLGSGRWPGRLLGSVSSGLLRHAHCPVVII 147
Score = 34.3 bits (77), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 129 VKAESLVLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIII 188
V +V+ P + Q +E+ L+VVGSRG G +GSV + A A P+I+
Sbjct: 234 VAITRVVVRDQPARQLVQRSEEAQ--LVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIV 291
Query: 189 VK 190
+
Sbjct: 292 AR 293
>sp|O27222|Y1154_METTH Universal stress protein MTH_1154 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1154 PE=3 SV=1
Length = 146
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 129 VKAESLVLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIII 188
V +++ EGDP D I + AE+ +D++V+G+ G + + LGSVS+ H+A C I +
Sbjct: 84 VSFRAVMREGDPADEIVKVAEEEDVDVIVMGT-GKSLVDKHLLGSVSEKVVHYAPCTIHL 142
Query: 189 VK 190
V+
Sbjct: 143 VR 144
>sp|O53472|Y2026_MYCTU Universal stress protein Rv2026c/MT2085 OS=Mycobacterium
tuberculosis GN=Rv2026c PE=2 SV=1
Length = 294
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 155 LLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIV 189
L+VVGS+G+G + R LGS+S HHA CP+ I+
Sbjct: 113 LMVVGSQGMGALGRLLLGSISTALLHHARCPVAII 147
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 107 KSQEENSAALLSRALQMCKDKM--VKAESLVLEGDPKDMICQSAEQMHIDLLVVGSRGLG 164
+ +E+ A +L+ L +++ V+ ++ P + + +EQ L+VVGS G G
Sbjct: 209 REREKREAEVLAERLAGWQEQYPDVRVHRSLVCDKPARWLLEHSEQAQ--LVVVGSHGRG 266
Query: 165 KIKRAFLGSVSDYCAHHAVCPIIIVKP 191
LGSVS AH P+I+V+P
Sbjct: 267 GFSGMLLGSVSSAVAHSVRIPVIVVRP 293
>sp|O74782|YGBA_SCHPO Universal stress protein A family protein C25B2.10
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC25B2.10 PE=1 SV=1
Length = 307
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Query: 130 KAESLVLE---GDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFL-----GSVSDYCAHH 181
KA S+++E G P+DMI ++ D L+VG+R GK +F GSVS +C
Sbjct: 211 KAVSIIVELVVGKPQDMILRTIHVYSPDSLIVGTR--GKALNSFQSLLSSGSVSKFCLQK 268
Query: 182 AVCPIIIVKPPKEQ 195
+ P+I+V+P +++
Sbjct: 269 SPIPVIVVRPDRKR 282
>sp|Q57997|Y577_METJA Universal stress protein MJ0577 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0577 PE=1 SV=1
Length = 162
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 102 VESVRKSQEENSAALLSRALQMCKDKM-----------VKAESLVLEGDPKDMICQSAEQ 150
V + KS EE L ++ + K+KM K + +++ G P + I + AE
Sbjct: 59 VAGLNKSVEEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAED 118
Query: 151 MHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
+D++++GS G +K LGSV++ + P+++VK
Sbjct: 119 EGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVK 158
>sp|P64922|Y2028_MYCBO Universal stress protein Mb2028c OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb2028c PE=3 SV=1
Length = 295
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 37/184 (20%)
Query: 25 MTDGKKKMKVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRF 84
M+ +K+ V+V +D S ES A W G T +A LT+VHV
Sbjct: 1 MSKPRKQHGVVVGVDGSLESDAAACW---------GAT-DAAMRNIPLTVVHV------- 43
Query: 85 VLPALSTSSAFYATSSMVESVRKSQEENSAALLSRALQMCKDKM-------VKAESLVLE 137
++ A + E+ QE+ +++ A+++ K+ + VK+E LV
Sbjct: 44 ----VNADVATWPPMPYPETWGVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSE-LVFS 98
Query: 138 GDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVKP-----P 192
M+ S E +++V+GS G G + R LGSVS A CP+ ++ P
Sbjct: 99 TPVPTMVEISNEA---EMVVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIP 155
Query: 193 KEQH 196
QH
Sbjct: 156 DPQH 159
Score = 34.7 bits (78), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 63/158 (39%), Gaps = 27/158 (17%)
Query: 34 VMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTSS 93
V+V ID S S A A D EA G L VH + LP L S+
Sbjct: 162 VLVGIDGSPVSELATAVAFD----------EASRRGVELIAVHAWSDVEVVELPGLDFSA 211
Query: 94 AFY-ATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLEGDPKDMICQSAEQMH 152
A S+ E + QE +SR + V + + ++ +SA
Sbjct: 212 VQQEAELSLAERLAGWQERYPDVPVSRVV-------------VCDRPARKLVQKSASA-- 256
Query: 153 IDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
L+VVGS G G + LGSVS+ H A P+I+ +
Sbjct: 257 -QLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
>sp|P64921|Y2005_MYCTU Universal stress protein Rv2005c/MT2061 OS=Mycobacterium
tuberculosis GN=Rv2005c PE=1 SV=1
Length = 295
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 37/184 (20%)
Query: 25 MTDGKKKMKVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRF 84
M+ +K+ V+V +D S ES A W G T +A LT+VHV
Sbjct: 1 MSKPRKQHGVVVGVDGSLESDAAACW---------GAT-DAAMRNIPLTVVHV------- 43
Query: 85 VLPALSTSSAFYATSSMVESVRKSQEENSAALLSRALQMCKDKM-------VKAESLVLE 137
++ A + E+ QE+ +++ A+++ K+ + VK+E LV
Sbjct: 44 ----VNADVATWPPMPYPETWGVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSE-LVFS 98
Query: 138 GDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVKP-----P 192
M+ S E +++V+GS G G + R LGSVS A CP+ ++ P
Sbjct: 99 TPVPTMVEISNEA---EMVVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVIHSDDAVIP 155
Query: 193 KEQH 196
QH
Sbjct: 156 DPQH 159
Score = 34.7 bits (78), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 63/158 (39%), Gaps = 27/158 (17%)
Query: 34 VMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTSS 93
V+V ID S S A A D EA G L VH + LP L S+
Sbjct: 162 VLVGIDGSPVSELATAVAFD----------EASRRGVELIAVHAWSDVEVVELPGLDFSA 211
Query: 94 AFY-ATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLEGDPKDMICQSAEQMH 152
A S+ E + QE +SR + V + + ++ +SA
Sbjct: 212 VQQEAELSLAERLAGWQERYPDVPVSRVV-------------VCDRPARKLVQKSASA-- 256
Query: 153 IDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
L+VVGS G G + LGSVS+ H A P+I+ +
Sbjct: 257 -QLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
>sp|Q49YE0|Y1056_STAS1 Putative universal stress protein SSP1056 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=SSP1056 PE=3 SV=1
Length = 167
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 34 VMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALSTSS 93
+++A+D S E+ +WA + + A LT+V+V S
Sbjct: 7 ILIAVDGSHEA----EWAFNKAVDV------AKRNDAKLTVVNV-------------IDS 43
Query: 94 AFYATSSMVESVRKSQEEN-SAALLSRALQMCKDKMVKAESLVLE-GDPKDMICQS-AEQ 150
Y++ + ++ + +N S LL ++ + VK LE G PK +I + A
Sbjct: 44 RTYSSYEVYDAQFTEKSKNFSDDLLKGYKEVATNAGVKNVETRLEFGSPKAIIPKKLATD 103
Query: 151 MHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
+ DL++ G+ GL ++R +GSVS+ H+ C +++V+
Sbjct: 104 VDADLIMCGTSGLNAVERFIVGSVSEAIVRHSPCDVLVVR 143
>sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33
PE=2 SV=2
Length = 834
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 17/131 (12%)
Query: 33 KVMVAIDES-AESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALST 91
K+ VA+D+ A+S + L WAL N GG + ++HV +P Q ++P +
Sbjct: 46 KIFVAVDKHVAKSKSTLIWALQN------------TGGKKICLIHVHQPSQ--MIPLMGA 91
Query: 92 SSAFYATSSM-VESVRKSQEENSAALLSRALQMCKDKMVKAESLVLEGDP-KDMICQSAE 149
A V R+ + E +L L++C+ + V+AE + +E + ++ I Q
Sbjct: 92 KFPVGAVKEEEVRVFREKEREKVHMILDDYLRICQQRGVRAEKMFIEMESIENGIVQLIS 151
Query: 150 QMHIDLLVVGS 160
++ I LV+G+
Sbjct: 152 ELGIRKLVMGA 162
>sp|P0AAC3|USPE_SHIFL Universal stress protein E OS=Shigella flexneri GN=uspE PE=3 SV=2
Length = 316
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 135 VLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVKPPKE 194
V +G P+++I AE + ++V+G+ G I AFLG+ ++ H C ++++KP +
Sbjct: 245 VEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIKPDQY 304
Query: 195 Q 195
Q
Sbjct: 305 Q 305
>sp|P0AAC0|USPE_ECOLI Universal stress protein E OS=Escherichia coli (strain K12) GN=uspE
PE=1 SV=2
Length = 316
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 135 VLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVKPPKE 194
V +G P+++I AE + ++V+G+ G I AFLG+ ++ H C ++++KP +
Sbjct: 245 VEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIKPDQY 304
Query: 195 Q 195
Q
Sbjct: 305 Q 305
>sp|P0AAC1|USPE_ECOL6 Universal stress protein E OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=uspE PE=3 SV=2
Length = 316
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 135 VLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVKPPKE 194
V +G P+++I AE + ++V+G+ G I AFLG+ ++ H C ++++KP +
Sbjct: 245 VEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIKPDQY 304
Query: 195 Q 195
Q
Sbjct: 305 Q 305
>sp|P0AAC2|USPE_ECO57 Universal stress protein E OS=Escherichia coli O157:H7 GN=uspE PE=3
SV=2
Length = 316
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 135 VLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVKPPKE 194
V +G P+++I AE + ++V+G+ G I AFLG+ ++ H C ++++KP +
Sbjct: 245 VEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIKPDQY 304
Query: 195 Q 195
Q
Sbjct: 305 Q 305
>sp|P95192|Y3134_MYCTU Universal stress protein Rv3134c/MT3220 OS=Mycobacterium
tuberculosis GN=Rv3134c PE=2 SV=1
Length = 268
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 68/167 (40%), Gaps = 29/167 (17%)
Query: 25 MTDGKKKMKVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRF 84
M+D + V+V ID S + +A WA+D EA L +V+V +P Q
Sbjct: 1 MSDPRPARAVVVGIDGSRAATHAALWAVD----------EAVNRDIPLRLVYVIDPSQ-- 48
Query: 85 VLPALSTSSAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAESLVLEGDPKDMI 144
L A A + + + E + VK E+ VL G P +
Sbjct: 49 -LSAAGEGGGQSAARAALHDASRKVEATG-------------QPVKIETEVLCGRPLTKL 94
Query: 145 CQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVKP 191
Q E +L VGS GL + R GSV+ A A+CP+ ++ P
Sbjct: 95 MQ--ESRSAAMLCVGSVGLDHV-RGRRGSVAATLAGSALCPVAVIHP 138
>sp|P87132|YFK5_SCHPO Uncharacterized protein C167.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC167.05 PE=1 SV=2
Length = 601
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 72/168 (42%), Gaps = 26/168 (15%)
Query: 26 TDGKKKMKVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFV 85
+ K+ + +D S+ES +A +WA VG G I+ ++ +P R V
Sbjct: 425 SSSKRNCTYFLTLDLSSESLHAAEWA-------VGILLRNGDTLIIVDVIECDDPSARAV 477
Query: 86 LPALSTSSAFYATSSMVESVRKSQEENSAALLSRALQMCKDKMVKAE---SLVLEGDPKD 142
+ S +E++ K + L++ +++ E ++ K
Sbjct: 478 KDRME--------SEQLETLEK--------ITKYILKLLSKTVLEVEVNIEVIHHEKAKH 521
Query: 143 MICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
+I + + + L+V+GSRG +K LGS S+Y + + P+++ +
Sbjct: 522 LIIEMIDYIEPSLVVMGSRGRSHLKGVLLGSFSNYLVNKSSVPVMVAR 569
>sp|P60005|USPE_PHOLL Universal stress protein E OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=uspE PE=3 SV=1
Length = 314
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 137 EGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVKP 191
EG P+ +I Q ++M+ ++V+G G + AFLG+ +++ H C I+ +KP
Sbjct: 248 EGLPESVIPQMCDEMNAGIIVLGILGRTGLSAAFLGNTAEHVIDHLKCDILTIKP 302
>sp|P72817|Y1654_SYNY3 Universal stress protein Sll1654 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1654 PE=3 SV=1
Length = 157
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 111 ENSAALLSRALQMCKDKMVKAESLVLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAF 170
E A LL A + + + +++ EG IC A++++ DL+V+G RGLG
Sbjct: 78 EAVAKLLEAAQAVFSQQGIATKTIEREGMASFTICDVADEVNADLIVMGCRGLGLTTEGV 137
Query: 171 LGSVSDYCAHHAVCPIIIV 189
SV+ + + CP+++V
Sbjct: 138 AESVTARVINLSPCPVLVV 156
>sp|Q8ZP84|USPE_SALTY Universal stress protein E OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=uspE PE=3 SV=3
Length = 315
Score = 38.1 bits (87), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 135 VLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVKPPKE 194
V +G P+++I AE + ++V+G+ G + AFLG+ ++ H C ++++KP +
Sbjct: 245 VEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGLSAAFLGNTAEQVIDHLRCDLLVIKPDEY 304
Query: 195 Q 195
Q
Sbjct: 305 Q 305
>sp|Q8Z788|USPE_SALTI Universal stress protein E OS=Salmonella typhi GN=uspE PE=3 SV=3
Length = 315
Score = 38.1 bits (87), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 135 VLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVKPPKE 194
V +G P+++I AE + ++V+G+ G + AFLG+ ++ H C ++++KP +
Sbjct: 245 VEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGLSAAFLGNTAEQVIDHLRCDLLVIKPDEY 304
Query: 195 Q 195
Q
Sbjct: 305 Q 305
>sp|P64649|Y031_HELPY Universal stress protein HP_0031 OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=HP_0031 PE=3 SV=1
Length = 137
Score = 37.4 bits (85), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 32 MKVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALST 91
M ++ I ++ E +NA+K+A+ + H + RF L +S
Sbjct: 1 MNILFGISDTQECYNAIKFAV--------------------KLAHSLKEV-RFTLLHVSM 39
Query: 92 SSAFYATSSMVE--SVRKSQEENSAALLSRALQMCKDKMVKAESLVLEGDPKDMICQSAE 149
Y+ S M++ +EE + ALL + K + ++ ES++ GD D++ A+
Sbjct: 40 EVFIYSESGMMDYGQTEALEEEKAKALLKQFEDAFKKENIECESVLKSGDLIDVVLDMAK 99
Query: 150 QMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
DLL++G+ + R F+ + ++ P++I K
Sbjct: 100 DY--DLLLIGASESNLLYRLFISHQNSLVEQSSI-PVVIAK 137
>sp|P64650|Y027_HELPJ Universal stress protein Jhp_0027 OS=Helicobacter pylori (strain
J99) GN=jhp_0027 PE=3 SV=1
Length = 137
Score = 37.4 bits (85), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 32 MKVMVAIDESAESFNALKWALDNLYGIVGFTPEAGGGGGILTIVHVQEPFQRFVLPALST 91
M ++ I ++ E +NA+K+A+ + H + RF L +S
Sbjct: 1 MNILFGISDTQECYNAIKFAV--------------------KLAHSLKEV-RFTLLHVSM 39
Query: 92 SSAFYATSSMVE--SVRKSQEENSAALLSRALQMCKDKMVKAESLVLEGDPKDMICQSAE 149
Y+ S M++ +EE + ALL + K + ++ ES++ GD D++ A+
Sbjct: 40 EVFIYSESGMMDYGQTEALEEEKAKALLKQFEDAFKKENIECESVLKSGDLIDVVLDMAK 99
Query: 150 QMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
DLL++G+ + R F+ + ++ P++I K
Sbjct: 100 DY--DLLLIGASESNLLYRLFISHQNSLVEQSSI-PVVIAK 137
>sp|Q83AC1|USPA1_COXBU Universal stress protein A homolog 1 OS=Coxiella burnetii (strain
RSA 493 / Nine Mile phase I) GN=uspA1 PE=3 SV=1
Length = 144
Score = 37.4 bits (85), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 122 QMCKDKMVKAE-SLVLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAH 180
++C V +E L G K M+ + AE+++IDL+VVG+ G + + LGS ++ H
Sbjct: 73 ELCHTVKVPSERQHTLSGVVKHMVIELAEKLNIDLIVVGTHGHHGLDK-LLGSRANAILH 131
Query: 181 HAVCPIIIV 189
A C ++ V
Sbjct: 132 VATCDVLAV 140
>sp|P67091|USPF_SALTY Universal stress protein F OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=uspF PE=3 SV=1
Length = 144
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 130 KAESLVLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIV 189
+ ++ V EG PKD I + A+++ D++++ S I LGS + HA C +++V
Sbjct: 85 RVQAHVAEGSPKDKILEMAKKLPADMVIIASHR-PDITTYLLGSNAAAVVRHAECSVLVV 143
Query: 190 K 190
+
Sbjct: 144 R 144
>sp|P67092|USPF_SALTI Universal stress protein F OS=Salmonella typhi GN=uspF PE=3 SV=1
Length = 144
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 130 KAESLVLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIV 189
+ ++ V EG PKD I + A+++ D++++ S I LGS + HA C +++V
Sbjct: 85 RVQAHVAEGSPKDKILEMAKKLPADMVIIASHR-PDITTYLLGSNAAAVVRHAECSVLVV 143
Query: 190 K 190
+
Sbjct: 144 R 144
>sp|P44195|USPE_HAEIN Universal stress protein E homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=uspE PE=1
SV=2
Length = 309
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 36/59 (61%)
Query: 135 VLEGDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVKPPK 193
V EG P+++I + A+++ +L+++G+ G + A LG+ +++ C ++ +KP K
Sbjct: 248 VREGFPEEVIPEVAKEIEAELVILGTVGRTGLSAALLGNTAEHVISKLSCNLLGIKPSK 306
>sp|O06153|Y1636_MYCTU Universal stress protein Rv1636/MT1672 OS=Mycobacterium
tuberculosis GN=Rv1636 PE=1 SV=1
Length = 146
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 138 GDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIV 189
G P D + A++ DLLVVG+ GL I LGSV + A ++IV
Sbjct: 92 GAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIV 143
>sp|P67093|USPG_SALTY Universal stress protein G OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=uspG PE=3 SV=1
Length = 142
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 138 GDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
G +D++ + E++ D++V+GSR I LGS + HA P+++V+
Sbjct: 91 GSVRDVVNEMGEELDADVVVIGSRN-PSITTHLLGSNASSVVRHATLPVLVVR 142
>sp|P67094|USPG_SALTI Universal stress protein G OS=Salmonella typhi GN=uspG PE=3 SV=1
Length = 142
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 138 GDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
G +D++ + E++ D++V+GSR I LGS + HA P+++V+
Sbjct: 91 GSVRDVVNEMGEELDADVVVIGSRN-PSITTHLLGSNASSVVRHATLPVLVVR 142
>sp|P45680|USPA2_COXBU Universal stress protein A homolog 2 OS=Coxiella burnetii (strain
RSA 493 / Nine Mile phase I) GN=uspA2 PE=1 SV=1
Length = 146
Score = 34.7 bits (78), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 138 GDPKDMICQSAEQMHIDLLVVGSRGLGKIKRAFLGSVSDYCAHHAVCPIIIVK 190
G K +I + A+ +DL++VGS G I+ LGS S+ H A C ++ V+
Sbjct: 91 GPAKFLILEQAKNWGVDLIIVGSHGRHGIQ-LLLGSTSNAVLHGAKCDVLAVR 142
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,146,513
Number of Sequences: 539616
Number of extensions: 2641480
Number of successful extensions: 8109
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 8041
Number of HSP's gapped (non-prelim): 88
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 58 (26.9 bits)