Your job contains 1 sequence.
>046291
MVHVSFYRNYGKTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARD
LLTLDEKDPRRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGL
AKSIHHARVLIKQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVKRKAQ
KAAAKKSAGGADEDDED
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046291
(197 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2178082 - symbol:AT5G39850 species:3702 "Arabi... 773 9.0e-77 1
TAIR|locus:2150976 - symbol:AT5G15200 species:3702 "Arabi... 744 1.1e-73 1
ASPGD|ASPL0000071451 - symbol:AN4803 species:162425 "Emer... 614 6.4e-60 1
DICTYBASE|DDB_G0289877 - symbol:rps9 "40S ribosomal prote... 599 2.5e-58 1
ZFIN|ZDB-GENE-010724-15 - symbol:rps9 "ribosomal protein ... 584 9.6e-57 1
FB|FBgn0010408 - symbol:RpS9 "Ribosomal protein S9" speci... 583 1.2e-56 1
UNIPROTKB|A6QLG5 - symbol:RPS9 "40S ribosomal protein S9"... 578 4.2e-56 1
UNIPROTKB|E2R8R8 - symbol:RPS9 "Uncharacterized protein" ... 578 4.2e-56 1
UNIPROTKB|P46781 - symbol:RPS9 "40S ribosomal protein S9"... 578 4.2e-56 1
UNIPROTKB|A9L913 - symbol:RPS9 "40S ribosomal protein S9"... 578 4.2e-56 1
MGI|MGI:1924096 - symbol:Rps9 "ribosomal protein S9" spec... 578 4.2e-56 1
RGD|619889 - symbol:Rps9 "ribosomal protein S9" species:1... 578 4.2e-56 1
WB|WBGene00004478 - symbol:rps-9 species:6239 "Caenorhabd... 570 2.9e-55 1
POMBASE|SPAC24H6.07 - symbol:rps901 "40S ribosomal protei... 569 3.7e-55 1
POMBASE|SPBC29A3.12 - symbol:rps902 "40S ribosomal protei... 569 3.7e-55 1
SGD|S000006002 - symbol:RPS9A "Protein component of the s... 568 4.8e-55 1
SGD|S000000393 - symbol:RPS9B "Protein component of the s... 564 1.3e-54 1
RGD|1566136 - symbol:RGD1566136 "similar to 40S ribosomal... 538 7.2e-52 1
UNIPROTKB|I3LEX0 - symbol:RPS9 "40S ribosomal protein S9"... 535 1.5e-51 1
UNIPROTKB|F1LY44 - symbol:F1LY44 "Uncharacterized protein... 480 1.0e-45 1
UNIPROTKB|C9JM19 - symbol:RPS9 "Ribosomal protein S9, iso... 463 6.4e-44 1
UNIPROTKB|B5MCT8 - symbol:RPS9 "40S ribosomal protein S9"... 458 2.2e-43 1
RGD|2320851 - symbol:LOC100364509 "ribosomal protein S9-l... 458 2.2e-43 1
UNIPROTKB|Q29197 - symbol:RPS9 "40S ribosomal protein S9"... 434 7.5e-41 1
RGD|1594500 - symbol:LOC365692 "similar to ribosomal prot... 276 4.2e-24 1
UNIPROTKB|A8MXK4 - symbol:RPS9 "40S ribosomal protein S9"... 250 2.4e-21 1
UNIPROTKB|F2Z3C0 - symbol:RPS9 "40S ribosomal protein S9"... 249 3.0e-21 1
RGD|1306825 - symbol:Imp3 "IMP3, U3 small nucleolar ribon... 185 1.8e-14 1
UNIPROTKB|F1MZR5 - symbol:IMP3 "U3 small nucleolar ribonu... 180 6.2e-14 1
UNIPROTKB|F1SJ73 - symbol:IMP3 "Uncharacterized protein" ... 179 7.9e-14 1
UNIPROTKB|Q3T0M3 - symbol:IMP3 "U3 small nucleolar ribonu... 177 1.3e-13 1
MGI|MGI:1916119 - symbol:Imp3 "IMP3, U3 small nucleolar r... 177 1.3e-13 1
UNIPROTKB|E2RL19 - symbol:IMP3 "Uncharacterized protein" ... 175 2.1e-13 1
UNIPROTKB|Q9NV31 - symbol:IMP3 "U3 small nucleolar ribonu... 171 5.6e-13 1
ZFIN|ZDB-GENE-040426-1062 - symbol:imp3 "IMP3, U3 small n... 160 8.2e-12 1
CGD|CAL0005715 - symbol:orf19.7488 species:5476 "Candida ... 143 5.2e-10 1
UNIPROTKB|Q5AAK1 - symbol:IMP3 "Likely U3 snoRNP protein"... 143 5.2e-10 1
POMBASE|SPAC19D5.05c - symbol:imp3 "U3 snoRNP-associated ... 142 6.6e-10 1
SGD|S000001191 - symbol:IMP3 "Component of the SSU proces... 141 8.4e-10 1
ASPGD|ASPL0000000714 - symbol:AN6171 species:162425 "Emer... 140 1.1e-09 1
WB|WBGene00016740 - symbol:C48B6.2 species:6239 "Caenorha... 138 1.8e-09 1
UNIPROTKB|E1BW88 - symbol:E1BW88 "Uncharacterized protein... 129 1.6e-08 1
TAIR|locus:2143196 - symbol:AT5G15750 species:3702 "Arabi... 127 7.6e-08 1
FB|FBgn0034232 - symbol:CG4866 species:7227 "Drosophila m... 122 7.0e-07 1
DICTYBASE|DDB_G0278983 - symbol:imp3 "U3 small nucleolar ... 114 1.2e-05 1
TIGR_CMR|GSU_2832 - symbol:GSU_2832 "ribosomal protein S4... 114 2.8e-05 1
TIGR_CMR|CPS_0625 - symbol:CPS_0625 "ribosomal protein S4... 113 3.7e-05 1
TIGR_CMR|SO_0255 - symbol:SO_0255 "ribosomal protein S4" ... 113 3.7e-05 1
TIGR_CMR|APH_0989 - symbol:APH_0989 "ribosomal protein S4... 112 5.0e-05 1
TIGR_CMR|CHY_2282 - symbol:CHY_2282 "ribosomal protein S4... 109 0.00013 1
UNIPROTKB|O06325 - symbol:rpsD "30S ribosomal protein S4"... 106 0.00030 1
UNIPROTKB|P0C486 - symbol:rps4 "30S ribosomal protein S4,... 106 0.00030 1
UNIPROTKB|P0C487 - symbol:rps4 "30S ribosomal protein S4,... 106 0.00030 1
UNIPROTKB|P0C488 - symbol:rps4 "30S ribosomal protein S4,... 106 0.00030 1
UNIPROTKB|Q6ENH2 - symbol:rps4 "30S ribosomal protein S4,... 106 0.00030 1
GENEDB_PFALCIPARUM|PF14_0584 - symbol:PF14_0584 "ribosoma... 101 0.00045 1
UNIPROTKB|Q8IKM0 - symbol:PF14_0584 "Mitochondrial riboso... 101 0.00045 1
TIGR_CMR|CJE_1766 - symbol:CJE_1766 "ribosomal protein S4... 104 0.00061 1
>TAIR|locus:2178082 [details] [associations]
symbol:AT5G39850 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005829
GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016020
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 GO:GO:0015935
EMBL:AB010077 Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525
ProtClustDB:PLN00189 TIGRFAMs:TIGR01018 EMBL:BT024915 EMBL:AY088109
IPI:IPI00526550 RefSeq:NP_198801.1 UniGene:At.43632
ProteinModelPortal:Q9FLF0 SMR:Q9FLF0 STRING:Q9FLF0 PaxDb:Q9FLF0
PRIDE:Q9FLF0 EnsemblPlants:AT5G39850.1 GeneID:833981
KEGG:ath:AT5G39850 TAIR:At5g39850 InParanoid:Q9FLF0 OMA:RTKRELW
PhylomeDB:Q9FLF0 Genevestigator:Q9FLF0 GermOnline:AT5G39850
Uniprot:Q9FLF0
Length = 197
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 152/198 (76%), Positives = 170/198 (85%)
Query: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARD 60
MV+V FYRNYGKTFKKPRRPYEKERLDAEL+LVG +GLRCKRELWRVQY LSRIRNAAR+
Sbjct: 1 MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60
Query: 61 LLTLDEKDPRRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGL 120
LLTLDEK+PRRIFEG+ALLRRM RYGLL+ TQNKLDYVLALTVE+FLERRLQT+VFK+G+
Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120
Query: 121 AKSIHHARVLIKQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXX 180
AKSIHHARVLI+Q+HIRVGRQ+VNIPSF+VRV++Q HV SLTS GRPGRV
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGG-GRPGRVKRRNE 179
Query: 181 XXXXXXXXGG-ADEDDED 197
GG DEDDE+
Sbjct: 180 RAGAKKASGGDGDEDDEE 197
>TAIR|locus:2150976 [details] [associations]
symbol:AT5G15200 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0009506
GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0009507 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:AL353993 GO:GO:0022627 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
EMBL:BT010847 EMBL:BT011315 EMBL:AK228437 IPI:IPI00534338
PIR:T49955 RefSeq:NP_197024.1 UniGene:At.1767
ProteinModelPortal:Q9LXG1 SMR:Q9LXG1 STRING:Q9LXG1 PaxDb:Q9LXG1
PRIDE:Q9LXG1 EnsemblPlants:AT5G15200.1 GeneID:831372
KEGG:ath:AT5G15200 TAIR:At5g15200 HOGENOM:HOG000194525
InParanoid:Q9LXG1 OMA:QTIVYRK PhylomeDB:Q9LXG1 ProtClustDB:PLN00189
Genevestigator:Q9LXG1 GermOnline:AT5G15200 TIGRFAMs:TIGR01018
Uniprot:Q9LXG1
Length = 198
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 143/197 (72%), Positives = 166/197 (84%)
Query: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARD 60
MVHV +YRNYGKTFK PRRPYEKERLD+EL+LVG +GLR KRELWRVQY+LSRIRNAARD
Sbjct: 1 MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60
Query: 61 LLTLDEKDPRRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGL 120
LLTLDEK PRRIFEG+ALLRRM RYGLL+ +QNKLDYVLALTVE+FLERRLQT+VFK+G+
Sbjct: 61 LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120
Query: 121 AKSIHHARVLIKQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXX 180
AKSIHH+RVLI+Q+HIRVG+Q+VNIPSF+VR+D+Q H+ +LTS GRPGRV
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGG-GRPGRVKRRNE 179
Query: 181 XXXXXXXXGGADEDDED 197
GG D D +D
Sbjct: 180 KSASKKASGGGDADGDD 196
>ASPGD|ASPL0000071451 [details] [associations]
symbol:AN4803 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0045903
"positive regulation of translational fidelity" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 GO:GO:0006412 GO:GO:0003735
EMBL:BN001303 GO:GO:0019843 EMBL:AACD01000081 GO:GO:0015935
Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 OMA:QTIVYRK
TIGRFAMs:TIGR01018 OrthoDB:EOG4Q886R RefSeq:XP_662407.1
ProteinModelPortal:Q5B3S7 STRING:Q5B3S7
EnsemblFungi:CADANIAT00005618 GeneID:2872602 KEGG:ani:AN4803.2
Uniprot:Q5B3S7
Length = 193
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 120/190 (63%), Positives = 149/190 (78%)
Query: 8 RNYGKTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEK 67
R Y KT+K PRRP+E RLD+EL++VG +GLR KRE+WRVQ+ LS+IR AAR+LLTLDEK
Sbjct: 6 RVYSKTYKVPRRPFESARLDSELKIVGEYGLRNKREVWRVQFTLSKIRRAARELLTLDEK 65
Query: 68 DPRRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHA 127
DP+R+FEG AL+RR+ R G+L+ ++ KLDYVLAL VE FLERRLQT V+K GLAKSIHHA
Sbjct: 66 DPKRLFEGNALIRRLVRIGVLDESRMKLDYVLALRVEDFLERRLQTCVYKLGLAKSIHHA 125
Query: 128 RVLIKQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXXXXXXXXX 187
RVLIKQ+HIRVG+QIVN+PS++VR+D+Q H+ +LTS GRPGRV
Sbjct: 126 RVLIKQRHIRVGKQIVNVPSYMVRLDSQKHIDFALTSPFGG-GRPGRVQRKKAAAAAG-- 182
Query: 188 XGGADEDDED 197
GG DE +ED
Sbjct: 183 -GGDDEGEED 191
>DICTYBASE|DDB_G0289877 [details] [associations]
symbol:rps9 "40S ribosomal protein S9" species:44689
"Dictyostelium discoideum" [GO:0031982 "vesicle" evidence=IDA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001912
InterPro:IPR002942 InterPro:IPR005710 InterPro:IPR018079
Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632 PROSITE:PS50889
SMART:SM00363 dictyBase:DDB_G0289877 GO:GO:0006412
GenomeReviews:CM000154_GR GO:GO:0003735 EMBL:AAFI02000149
GO:GO:0031982 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
TIGRFAMs:TIGR01018 OMA:QDFMERR EMBL:X06636 EMBL:X15384 PIR:S01093
RefSeq:XP_635999.1 ProteinModelPortal:P14132 STRING:P14132
PRIDE:P14132 EnsemblProtists:DDB0191528 GeneID:8627414
KEGG:ddi:DDB_G0289877 ProtClustDB:PTZ00155 Uniprot:P14132
Length = 185
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 113/166 (68%), Positives = 142/166 (85%)
Query: 9 NYGKTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKD 68
NY KT PRRP+EKER+DAEL++VG FGL+ K E+WRVQYAL++IR AAR+LL LDEKD
Sbjct: 4 NYSKTSHTPRRPFEKERIDAELKVVGEFGLKNKNEVWRVQYALAKIRKAARELLVLDEKD 63
Query: 69 PRRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHAR 128
P+RIFEG ALLRR+ + G++E ++NKLDY+L L V+ F+ERRLQT+VFK GLAKSIHHAR
Sbjct: 64 PKRIFEGSALLRRLHKLGVMEESKNKLDYILNLKVQDFMERRLQTLVFKNGLAKSIHHAR 123
Query: 129 VLIKQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGR 174
VLIK +HIRVG+Q+VN+PSFLVRV++Q H+G++ TS L GRPGR
Sbjct: 124 VLIKGRHIRVGKQLVNVPSFLVRVESQKHLGLASTSPLAG-GRPGR 168
>ZFIN|ZDB-GENE-010724-15 [details] [associations]
symbol:rps9 "ribosomal protein S9" species:7955
"Danio rerio" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 ZFIN:ZDB-GENE-010724-15 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
EMBL:BX511250 HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 CTD:6203 HOVERGEN:HBG001135
EMBL:CU693477 EMBL:BC059492 EMBL:BC062833 IPI:IPI00487430
RefSeq:NP_957146.1 UniGene:Dr.75119 STRING:Q6P5M3
Ensembl:ENSDART00000129698 GeneID:114420 KEGG:dre:114420
InParanoid:Q6P5M3 NextBio:20796909 Uniprot:Q6P5M3
Length = 194
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 114/185 (61%), Positives = 142/185 (76%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRR 71
KT+ PRRP+EK RLD ELRL+G +GLR KRE+WRV++ L++IR AAR+LLTLDEKDP+R
Sbjct: 11 KTYVTPRRPFEKSRLDQELRLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPKR 70
Query: 72 IFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLI 131
+FEG ALLRR+ R G+L+ + KLDY+L L VE FLERRLQT VFK GLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 132 KQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXXXXXXXXXXGGA 191
+Q+HIRV +Q+VNIPSF+VR+D+Q H+ SL S GRPGRV GG
Sbjct: 131 RQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLRSPYGG-GRPGRVKRKNAKKAQGGGGGGD 189
Query: 192 DEDDE 196
DE+++
Sbjct: 190 DEEED 194
>FB|FBgn0010408 [details] [associations]
symbol:RpS9 "Ribosomal protein S9" species:7227 "Drosophila
melanogaster" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0005840 "ribosome" evidence=IDA;NAS]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 EMBL:AE014296
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
GO:GO:0000022 GO:GO:0015935 Gene3D:3.10.290.10 eggNOG:COG0522
InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997 OMA:QTIVYRK
TIGRFAMs:TIGR01018 GeneTree:ENSGT00550000074829 CTD:6203
EMBL:X69677 EMBL:AY231798 RefSeq:NP_524004.2 RefSeq:NP_729506.1
UniGene:Dm.6943 ProteinModelPortal:P55935 SMR:P55935 IntAct:P55935
STRING:P55935 PaxDb:P55935 PRIDE:P55935 EnsemblMetazoa:FBtr0076423
EnsemblMetazoa:FBtr0076425 GeneID:39108 KEGG:dme:Dmel_CG3395
FlyBase:FBgn0010408 InParanoid:P55935 OrthoDB:EOG4N2Z52
PhylomeDB:P55935 ChiTaRS:RPS9 GenomeRNAi:39108 NextBio:811958
Bgee:P55935 GermOnline:CG3395 Uniprot:P55935
Length = 195
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 115/188 (61%), Positives = 145/188 (77%)
Query: 10 YGKTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDP 69
+ KT+ PRRPYEK RLD EL+++G +GLR KRE+WRV+YAL++IR AAR+LLTLDEKD
Sbjct: 10 FSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDE 69
Query: 70 RRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARV 129
+R+F+G ALLRR+ R G+L+ ++ KLDYVL L +E FLERRLQT VFK GLAKSIHHARV
Sbjct: 70 KRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARV 129
Query: 130 LIKQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXXXXXXXXXXG 189
LI+Q+HIRV +Q+VNIPSF+VR+D+Q H+ SL S GRPGRV G
Sbjct: 130 LIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGG-GRPGRVKRKNLKKNQGGG-G 187
Query: 190 GADEDDED 197
GA E++ED
Sbjct: 188 GAAEEEED 195
>UNIPROTKB|A6QLG5 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9913 "Bos
taurus" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0030529 GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 EMBL:BC147956 EMBL:BC148016
IPI:IPI00694565 RefSeq:NP_001094622.1 UniGene:Bt.52718
ProteinModelPortal:A6QLG5 SMR:A6QLG5 STRING:A6QLG5 PRIDE:A6QLG5
Ensembl:ENSBTAT00000008502 GeneID:533892 KEGG:bta:533892 CTD:6203
HOVERGEN:HBG001135 InParanoid:A6QLG5 OrthoDB:EOG4MW876
NextBio:20876183 Uniprot:A6QLG5
Length = 194
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 112/185 (60%), Positives = 141/185 (76%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRR 71
KT+ PRRP+EK RLD EL+L+G +GLR KRE+WRV++ L++IR AAR+LLTLDEKDPRR
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 72 IFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLI 131
+FEG ALLRR+ R G+L+ + KLDY+L L +E FLERRLQT VFK GLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 132 KQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXXXXXXXXXXGGA 191
+Q+HIRV +Q+VNIPSF+VR+D+Q H+ SL S GRPGRV G
Sbjct: 131 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGG-GRPGRVKRKNAKKGQGGAGAGD 189
Query: 192 DEDDE 196
DE+++
Sbjct: 190 DEEED 194
>UNIPROTKB|E2R8R8 [details] [associations]
symbol:RPS9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 CTD:6203 EMBL:AAEX03000741
RefSeq:XP_533590.2 ProteinModelPortal:E2R8R8 SMR:E2R8R8
PRIDE:E2R8R8 Ensembl:ENSCAFT00000004179 GeneID:476387
KEGG:cfa:476387 NextBio:20852054 Uniprot:E2R8R8
Length = 194
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 112/185 (60%), Positives = 141/185 (76%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRR 71
KT+ PRRP+EK RLD EL+L+G +GLR KRE+WRV++ L++IR AAR+LLTLDEKDPRR
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 72 IFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLI 131
+FEG ALLRR+ R G+L+ + KLDY+L L +E FLERRLQT VFK GLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 132 KQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXXXXXXXXXXGGA 191
+Q+HIRV +Q+VNIPSF+VR+D+Q H+ SL S GRPGRV G
Sbjct: 131 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGG-GRPGRVKRKNAKKGQGGAGAGD 189
Query: 192 DEDDE 196
DE+++
Sbjct: 190 DEEED 194
>UNIPROTKB|P46781 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IDA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IMP] [GO:0006412 "translation"
evidence=IC;IMP;TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0045182 "translation
regulator activity" evidence=IMP] [GO:0005840 "ribosome"
evidence=NAS] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0006417 "regulation of translation" evidence=IMP]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 Reactome:REACT_116125 GO:GO:0005730
GO:GO:0000184 GO:GO:0006413 GO:GO:0008284 GO:GO:0045182
GO:GO:0003735 GO:GO:0019843 EMBL:CH471135 GO:GO:0006415
GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0019083 Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 EMBL:CU151838 EMBL:CU457734
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018 CTD:6203
HOVERGEN:HBG001135 OrthoDB:EOG4MW876 ChiTaRS:RPS9 EMBL:U14971
EMBL:AB061839 EMBL:BC000802 EMBL:BC007410 EMBL:BC007434
EMBL:BC007857 EMBL:BC068055 EMBL:BC071940 EMBL:BC096756
EMBL:AB007150 IPI:IPI00221088 PIR:S55917 RefSeq:NP_001004.2
UniGene:Hs.467284 UniGene:Hs.546288 ProteinModelPortal:P46781
SMR:P46781 IntAct:P46781 MINT:MINT-5001013 STRING:P46781
PhosphoSite:P46781 DMDM:20178311 PaxDb:P46781 PeptideAtlas:P46781
PRIDE:P46781 DNASU:6203 Ensembl:ENST00000302907
Ensembl:ENST00000391752 Ensembl:ENST00000391753
Ensembl:ENST00000573353 Ensembl:ENST00000573511
Ensembl:ENST00000574910 Ensembl:ENST00000575726
Ensembl:ENST00000575746 Ensembl:ENST00000576887 GeneID:6203
KEGG:hsa:6203 UCSC:uc002qdx.3 GeneCards:GC19P054828 HGNC:HGNC:10442
HPA:HPA048746 MIM:603631 neXtProt:NX_P46781 PharmGKB:PA34857
InParanoid:P46781 PhylomeDB:P46781 GenomeRNAi:6203 NextBio:24091
ArrayExpress:P46781 Bgee:P46781 CleanEx:HS_RPS9
Genevestigator:P46781 GermOnline:ENSG00000170889 Uniprot:P46781
Length = 194
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 112/185 (60%), Positives = 141/185 (76%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRR 71
KT+ PRRP+EK RLD EL+L+G +GLR KRE+WRV++ L++IR AAR+LLTLDEKDPRR
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 72 IFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLI 131
+FEG ALLRR+ R G+L+ + KLDY+L L +E FLERRLQT VFK GLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 132 KQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXXXXXXXXXXGGA 191
+Q+HIRV +Q+VNIPSF+VR+D+Q H+ SL S GRPGRV G
Sbjct: 131 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGG-GRPGRVKRKNAKKGQGGAGAGD 189
Query: 192 DEDDE 196
DE+++
Sbjct: 190 DEEED 194
>UNIPROTKB|A9L913 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9555 "Papio
anubis" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 GO:GO:0006412 GO:GO:0003735
GO:GO:0030529 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
InterPro:IPR022801 PANTHER:PTHR11831 TIGRFAMs:TIGR01018 CTD:6203
HOVERGEN:HBG001135 EMBL:DP000506 RefSeq:NP_001162349.1
UniGene:Pan.54 ProteinModelPortal:A9L913 SMR:A9L913 PRIDE:A9L913
GeneID:100137341 Uniprot:A9L913
Length = 194
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 112/185 (60%), Positives = 141/185 (76%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRR 71
KT+ PRRP+EK RLD EL+L+G +GLR KRE+WRV++ L++IR AAR+LLTLDEKDPRR
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 72 IFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLI 131
+FEG ALLRR+ R G+L+ + KLDY+L L +E FLERRLQT VFK GLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 132 KQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXXXXXXXXXXGGA 191
+Q+HIRV +Q+VNIPSF+VR+D+Q H+ SL S GRPGRV G
Sbjct: 131 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGG-GRPGRVKRKNAKKGQGGAGAGD 189
Query: 192 DEDDE 196
DE+++
Sbjct: 190 DEEED 194
>MGI|MGI:1924096 [details] [associations]
symbol:Rps9 "ribosomal protein S9" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=ISO] [GO:0006417
"regulation of translation" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=ISO]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 MGI:MGI:1924096 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0030529 GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 CTD:6203 HOVERGEN:HBG001135
OrthoDB:EOG4MW876 ChiTaRS:RPS9 EMBL:AK050591 EMBL:AK081889
EMBL:AK150800 EMBL:AK150988 EMBL:AK151029 EMBL:AK151621
EMBL:BC031746 IPI:IPI00420726 RefSeq:NP_084043.1 UniGene:Mm.13944
ProteinModelPortal:Q6ZWN5 SMR:Q6ZWN5 STRING:Q6ZWN5
PhosphoSite:Q6ZWN5 PaxDb:Q6ZWN5 PRIDE:Q6ZWN5
Ensembl:ENSMUST00000006496 Ensembl:ENSMUST00000108625 GeneID:76846
KEGG:mmu:76846 UCSC:uc009ewa.1 InParanoid:Q6ZWN5 NextBio:345919
Bgee:Q6ZWN5 CleanEx:MM_RPS9 Genevestigator:Q6ZWN5
GermOnline:ENSMUSG00000006333 Uniprot:Q6ZWN5
Length = 194
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 112/185 (60%), Positives = 141/185 (76%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRR 71
KT+ PRRP+EK RLD EL+L+G +GLR KRE+WRV++ L++IR AAR+LLTLDEKDPRR
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 72 IFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLI 131
+FEG ALLRR+ R G+L+ + KLDY+L L +E FLERRLQT VFK GLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 132 KQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXXXXXXXXXXGGA 191
+Q+HIRV +Q+VNIPSF+VR+D+Q H+ SL S GRPGRV G
Sbjct: 131 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGG-GRPGRVKRKNAKKGQGGAGAGD 189
Query: 192 DEDDE 196
DE+++
Sbjct: 190 DEEED 194
>RGD|619889 [details] [associations]
symbol:Rps9 "ribosomal protein S9" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006412 "translation" evidence=IEA;ISO]
[GO:0006417 "regulation of translation" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008284 "positive regulation
of cell proliferation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO;IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO;ISS] [GO:0045182 "translation regulator activity"
evidence=ISO] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 RGD:619889
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 GO:GO:0022627
Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 OMA:QTIVYRK
TIGRFAMs:TIGR01018 GeneTree:ENSGT00550000074829 CTD:6203
HOVERGEN:HBG001135 OrthoDB:EOG4MW876 EMBL:X66370 EMBL:BC060560
IPI:IPI00421626 PIR:JN0587 RefSeq:NP_112370.2 RefSeq:XP_003748763.1
UniGene:Rn.109735 UniGene:Rn.225908 ProteinModelPortal:P29314
SMR:P29314 IntAct:P29314 STRING:P29314 PRIDE:P29314
Ensembl:ENSRNOT00000015234 GeneID:100909466 GeneID:81772
KEGG:rno:100909466 KEGG:rno:81772 UCSC:RGD:619889 InParanoid:P29314
NextBio:615589 ArrayExpress:P29314 Genevestigator:P29314
GermOnline:ENSRNOG00000011355 Uniprot:P29314
Length = 194
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 112/185 (60%), Positives = 141/185 (76%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRR 71
KT+ PRRP+EK RLD EL+L+G +GLR KRE+WRV++ L++IR AAR+LLTLDEKDPRR
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 72 IFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLI 131
+FEG ALLRR+ R G+L+ + KLDY+L L +E FLERRLQT VFK GLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 132 KQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXXXXXXXXXXGGA 191
+Q+HIRV +Q+VNIPSF+VR+D+Q H+ SL S GRPGRV G
Sbjct: 131 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGG-GRPGRVKRKNAKKGQGGAGAGD 189
Query: 192 DEDDE 196
DE+++
Sbjct: 190 DEEED 194
>WB|WBGene00004478 [details] [associations]
symbol:rps-9 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0032502
"developmental process" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 GO:GO:0010171 GO:GO:0000003
GO:GO:0003735 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 EMBL:Z69302 PIR:T22034
RefSeq:NP_496384.1 ProteinModelPortal:Q20228 SMR:Q20228
DIP:DIP-25908N MINT:MINT-1122534 STRING:Q20228 PaxDb:Q20228
PRIDE:Q20228 EnsemblMetazoa:F40F8.10.1 EnsemblMetazoa:F40F8.10.2
GeneID:174699 KEGG:cel:CELE_F40F8.10 UCSC:F40F8.10.1 CTD:174699
WormBase:F40F8.10 InParanoid:Q20228 NextBio:885126 Uniprot:Q20228
Length = 189
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 112/183 (61%), Positives = 141/183 (77%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRR 71
K K PRRP+EKERLD EL+L+G+FGL+ KRE+WRV+Y L+++R AAR+LLTL++KDP+R
Sbjct: 10 KVTKSPRRPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTLEDKDPKR 69
Query: 72 IFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLI 131
+FEG ALLRR+ + G+L+ T+ KLDYVL L VE FLERRLQT VFK GLAKSIHHAR+LI
Sbjct: 70 LFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILI 129
Query: 132 KQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXXXXXXXXXXGGA 191
KQ HIRV RQ+V++PSF+VR+D+Q H+ SL S GRPGRV GG
Sbjct: 130 KQHHIRVRRQVVDVPSFIVRLDSQKHIDFSLQSPYGG-GRPGRVKRRTLRKGDGA--GGD 186
Query: 192 DED 194
DE+
Sbjct: 187 DEE 189
>POMBASE|SPAC24H6.07 [details] [associations]
symbol:rps901 "40S ribosomal protein S9" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 PomBase:SPAC24H6.07 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 TIGRFAMs:TIGR01018
EMBL:AB027929 EMBL:AB011008 PIR:S62409 PIR:T43321
RefSeq:NP_592945.1 ProteinModelPortal:Q09757 STRING:Q09757
PRIDE:Q09757 EnsemblFungi:SPAC24H6.07.1 GeneID:2542629
KEGG:spo:SPAC24H6.07 OMA:QDFMERR OrthoDB:EOG4Q886R NextBio:20803678
Uniprot:Q09757
Length = 191
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 110/167 (65%), Positives = 134/167 (80%)
Query: 8 RNYGKTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEK 67
R KT+K PRRP+E RLDAEL+L G +GLR K E+WRV LS+IR AAR+LLTLDEK
Sbjct: 6 RKQSKTYKVPRRPFESARLDAELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEK 65
Query: 68 DPRRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHA 127
DP+R+FEG A++RR+ R G+L+ T+ KLDYVLAL +E FLERRLQT VFK GLAKSIHHA
Sbjct: 66 DPKRLFEGNAIIRRLVRLGILDETRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHA 125
Query: 128 RVLIKQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGR 174
RVLI Q+HIRVG+QIVN+PSF+VR+D Q H+ +L+S GRPGR
Sbjct: 126 RVLIFQRHIRVGKQIVNVPSFVVRLDTQKHIDFALSSPYGG-GRPGR 171
>POMBASE|SPBC29A3.12 [details] [associations]
symbol:rps902 "40S ribosomal protein S9 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 PomBase:SPBC29A3.12 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 OMA:QTIVYRK
TIGRFAMs:TIGR01018 EMBL:AB027929 OrthoDB:EOG4Q886R EMBL:AB029515
PIR:T40083 PIR:T43516 RefSeq:NP_595840.1 ProteinModelPortal:O59675
STRING:O59675 PRIDE:O59675 EnsemblFungi:SPBC29A3.12.1
GeneID:2540367 KEGG:spo:SPBC29A3.12 NextBio:20801495 Uniprot:O59675
Length = 192
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 110/167 (65%), Positives = 135/167 (80%)
Query: 8 RNYGKTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEK 67
R KT+K PRRP+E RLDAEL+L G +GLR K E+WRV LS+IR AAR+LLTLDEK
Sbjct: 6 RKQSKTYKVPRRPFESARLDAELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEK 65
Query: 68 DPRRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHA 127
DP+R+FEG A++RR+ R G+L+ ++ KLDYVLAL +E FLERRLQT VFK GLAKSIHHA
Sbjct: 66 DPKRLFEGNAIIRRLVRLGILDESRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHA 125
Query: 128 RVLIKQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGR 174
RVLI Q+HIRVG+QIVN+PSF+VR+DAQ H+ +L+S GRPGR
Sbjct: 126 RVLIFQRHIRVGKQIVNVPSFVVRLDAQKHIDFALSSPYGG-GRPGR 171
>SGD|S000006002 [details] [associations]
symbol:RPS9A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IGI] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA;IMP;IDA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IDA] [GO:0002181 "cytoplasmic
translation" evidence=IC] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 SGD:S000006002
GO:GO:0005730 EMBL:BK006949 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 EMBL:U41849 GO:GO:0030686 GO:GO:0032040 GO:GO:0000462
PDB:1S1H PDBsum:1S1H GO:GO:0022627 PDB:3IZB PDB:3O2Z PDB:3O30
PDB:3U5C PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3U5C
PDBsum:3U5G Gene3D:3.10.290.10 InterPro:IPR022801 PANTHER:PTHR11831
KO:K02997 PDB:1K5X PDBsum:1K5X HOGENOM:HOG000194525
TIGRFAMs:TIGR01018 OMA:RTKRELW OrthoDB:EOG4Q886R EMBL:D00724
PIR:S16822 RefSeq:NP_015244.1 ProteinModelPortal:O13516 SMR:O13516
IntAct:O13516 MINT:MINT-2786178 STRING:O13516 PeptideAtlas:O13516
PRIDE:O13516 EnsemblFungi:YPL081W GeneID:856024 KEGG:sce:YPL081W
GeneTree:ENSGT00550000074829 EvolutionaryTrace:O13516
NextBio:980938 Genevestigator:O13516 GermOnline:YPL081W
Uniprot:O13516
Length = 197
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 111/189 (58%), Positives = 137/189 (72%)
Query: 8 RNYGKTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEK 67
R Y KT+ P+RPYE RLDAEL+L G FGL+ K+E++R+ + LS+IR AARDLLT DEK
Sbjct: 6 RTYSKTYSTPKRPYESSRLDAELKLAGEFGLKNKKEIYRISFQLSKIRRAARDLLTRDEK 65
Query: 68 DPRRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHA 127
DP+R+FEG AL+RR+ R G+L + KLDYVLAL VE FLERRLQT V+K GLAKS+HHA
Sbjct: 66 DPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHA 125
Query: 128 RVLIKQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXXXXXXXXX 187
RVLI Q+HI VG+QIVNIPSF+VR+D++ H+ + TS RPGRV
Sbjct: 126 RVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGA-RPGRVARRNAARKAEAS 184
Query: 188 XGGADEDDE 196
ADE DE
Sbjct: 185 GEAADEADE 193
>SGD|S000000393 [details] [associations]
symbol:RPS9B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0045903 "positive regulation of translational fidelity"
evidence=IMP] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 SGD:S000000393
GO:GO:0005730 GO:GO:0006412 EMBL:BK006936 GO:GO:0003735
RefSeq:NP_009753.3 GeneID:852493 KEGG:sce:YBR194W GO:GO:0019843
GO:GO:0030686 GO:GO:0032040 GO:GO:0045903 GO:GO:0000462
GO:GO:0022627 EMBL:U02073 Gene3D:3.10.290.10 eggNOG:COG0522
InterPro:IPR022801 PANTHER:PTHR11831 RefSeq:NP_009748.3
GeneID:852487 KEGG:sce:YBR189W KO:K02997 HOGENOM:HOG000194525
OMA:QTIVYRK TIGRFAMs:TIGR01018 OrthoDB:EOG4Q886R
GeneTree:ENSGT00550000074829 EMBL:M88650 EMBL:Z36058 PIR:S31287
ProteinModelPortal:P05755 SMR:P05755 IntAct:P05755
MINT:MINT-2786155 STRING:P05755 PaxDb:P05755 PeptideAtlas:P05755
EnsemblFungi:YBR189W NextBio:971471 Genevestigator:P05755
GermOnline:YBR189W Uniprot:P05755
Length = 195
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 111/191 (58%), Positives = 139/191 (72%)
Query: 8 RNYGKTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEK 67
R Y KT+ P+RPYE RLDAEL+L G FGL+ KRE++R+ + LS+IR AARDLLT DEK
Sbjct: 6 RTYSKTYSTPKRPYESSRLDAELKLAGEFGLKNKREIYRISFQLSKIRRAARDLLTRDEK 65
Query: 68 DPRRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHA 127
DP+R+FEG AL+RR+ R G+L + KLDYVLAL VE FLERRLQT V+K GLAKS+HHA
Sbjct: 66 DPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHA 125
Query: 128 RVLIKQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXXXXXXXXX 187
RVLI Q+HI VG+QIVNIPSF+VR+D++ H+ + TS RPGRV
Sbjct: 126 RVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGA-RPGRVARRNAARKAEAS 184
Query: 188 XGGADE-DDED 197
A+E +DE+
Sbjct: 185 GEAAEEAEDEE 195
>RGD|1566136 [details] [associations]
symbol:RGD1566136 "similar to 40S ribosomal protein S9"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] InterPro:IPR001912
InterPro:IPR002942 InterPro:IPR005710 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 RGD:1566136 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
InterPro:IPR022801 PANTHER:PTHR11831 TIGRFAMs:TIGR01018 OMA:QDFMERR
GeneTree:ENSGT00550000074829 OrthoDB:EOG4MW876 IPI:IPI00368950
RefSeq:XP_001056883.1 RefSeq:XP_213106.1 PRIDE:D3ZV50
Ensembl:ENSRNOT00000060001 GeneID:300278 KEGG:rno:300278 CTD:300278
NextBio:646699 Uniprot:D3ZV50
Length = 194
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 106/185 (57%), Positives = 135/185 (72%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRR 71
KT+ PRRP+EK RLD EL+L+G +GLR K E+WRV++ L++IR AAR+LLTLDEKDPRR
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 72 IFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLI 131
+FEG ALLRR+ R +L+ + KLDY+L L +E FLERRLQT VFK LAKSIHHA VLI
Sbjct: 71 LFEGNALLRRLVRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLI 130
Query: 132 KQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXXXXXXXXXXGGA 191
+Q+HIRV +Q+VNIPSF+V +D+ H+ SL S GRPGRV G
Sbjct: 131 RQRHIRVRKQVVNIPSFIVCLDSHKHIDFSLRSPYGG-GRPGRVKRKNAKKGQGGAGAGD 189
Query: 192 DEDDE 196
DE+++
Sbjct: 190 DEEED 194
>UNIPROTKB|I3LEX0 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9823 "Sus
scrofa" [GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 EMBL:FP476135
Ensembl:ENSSSCT00000027911 Uniprot:I3LEX0
Length = 193
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 109/188 (57%), Positives = 138/188 (73%)
Query: 12 KTFKKPRRPYEK---ERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKD 68
KT+ PRRP+E R +A+ RLV +GLR KRE+WRV++ L++IR AAR+LLTLDEKD
Sbjct: 8 KTYVTPRRPFESLASTRAEAD-RLVREYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 66
Query: 69 PRRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHAR 128
PRR+FEG ALLRR+ R G+L+ + KLDY+L L +E FLERRLQT VFK GLAKSIHHAR
Sbjct: 67 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 126
Query: 129 VLIKQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXXXXXXXXXX 188
VLI+Q+HIRV +Q+VNIPSF+VR+D+Q H+ SL S GRPGRV
Sbjct: 127 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGG-GRPGRVKRKNAKKGQGGAG 185
Query: 189 GGADEDDE 196
G DE+++
Sbjct: 186 AGDDEEED 193
>UNIPROTKB|F1LY44 [details] [associations]
symbol:F1LY44 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 Pfam:PF00163 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 TIGRFAMs:TIGR01018 IPI:IPI00370527
Ensembl:ENSRNOT00000048196 Uniprot:F1LY44
Length = 189
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 98/185 (52%), Positives = 130/185 (70%)
Query: 11 GKTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPR 70
GKT P+RP+EK RLD L+L+G +GLR KRE+W+V++ L++IR A +LLTLDEKDP+
Sbjct: 7 GKTDVTPQRPFEKSRLDQGLKLIGEYGLRNKREVWKVKFTLAKIRKPALELLTLDEKDPQ 66
Query: 71 RIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVL 130
+FEG ALLR++ +G LE + KLDY+L L +E FLER LQT VFK LAKSIHHARVL
Sbjct: 67 PLFEGNALLRQLVHFGELEEGKMKLDYILGLKIEDFLERWLQTQVFKLDLAKSIHHARVL 126
Query: 131 IKQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQTGRPGRVXXXXXXXXXXXXXGG 190
I ++HIRV +Q+VN+ +VR+D+Q H+ SL S + GRPGRV G
Sbjct: 127 ICRRHIRVRKQVVNV---IVRLDSQKHIDFSLRSYYSG-GRPGRVKRKNAKKGQGGAGAG 182
Query: 191 ADEDD 195
DE++
Sbjct: 183 DDEEE 187
>UNIPROTKB|C9JM19 [details] [associations]
symbol:RPS9 "Ribosomal protein S9, isoform CRA_e"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
EMBL:CH471135 GO:GO:0015935 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 EMBL:AC010492 EMBL:AC012314 HOGENOM:HOG000194525
TIGRFAMs:TIGR01018 ChiTaRS:RPS9 UniGene:Hs.467284 UniGene:Hs.546288
HGNC:HGNC:10442 IPI:IPI00925580 SMR:C9JM19 STRING:C9JM19
Ensembl:ENST00000441429 UCSC:uc002qeb.3 Uniprot:C9JM19
Length = 156
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 87/126 (69%), Positives = 107/126 (84%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRR 71
KT+ PRRP+EK RLD EL+L+G +GLR KRE+WRV++ L++IR AAR+LLTLDEKDPRR
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 72 IFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLI 131
+FEG ALLRR+ R G+L+ + KLDY+L L +E FLERRLQT VFK GLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 132 KQKHIR 137
+Q+HIR
Sbjct: 131 RQRHIR 136
>UNIPROTKB|B5MCT8 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
EMBL:CH471135 GO:GO:0015935 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 EMBL:AC010492 EMBL:AC012314 HOGENOM:HOG000194525
TIGRFAMs:TIGR01018 HOVERGEN:HBG001135 ChiTaRS:RPS9
UniGene:Hs.467284 UniGene:Hs.546288 HGNC:HGNC:10442 IPI:IPI00879238
SMR:B5MCT8 STRING:B5MCT8 Ensembl:ENST00000402367
Ensembl:ENST00000436445 Ensembl:ENST00000445961 Uniprot:B5MCT8
Length = 139
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 86/125 (68%), Positives = 106/125 (84%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRR 71
KT+ PRRP+EK RLD EL+L+G +GLR KRE+WRV++ L++IR AAR+LLTLDEKDPRR
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 72 IFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLI 131
+FEG ALLRR+ R G+L+ + KLDY+L L +E FLERRLQT VFK GLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 132 KQKHI 136
+Q+HI
Sbjct: 131 RQRHI 135
>RGD|2320851 [details] [associations]
symbol:LOC100364509 "ribosomal protein S9-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 RGD:2320851 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 TIGRFAMs:TIGR01018 EMBL:AC126217 IPI:IPI00391036
ProteinModelPortal:D3ZF87 SMR:D3ZF87 PRIDE:D3ZF87
Ensembl:ENSRNOT00000035413 ArrayExpress:D3ZF87 Uniprot:D3ZF87
Length = 139
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 86/125 (68%), Positives = 106/125 (84%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRR 71
KT+ PRRP+EK RLD EL+L+G +GLR KRE+WRV++ L++IR AAR+LLTLDEKDPRR
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 72 IFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLI 131
+FEG ALLRR+ R G+L+ + KLDY+L L +E FLERRLQT VFK GLAKSIHHARVLI
Sbjct: 71 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130
Query: 132 KQKHI 136
+Q+HI
Sbjct: 131 RQRHI 135
>UNIPROTKB|Q29197 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9823 "Sus
scrofa" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001912 InterPro:IPR005710 Pfam:PF00163
PROSITE:PS00632 PROSITE:PS50889 GO:GO:0006412 GO:GO:0003735
GO:GO:0030529 GO:GO:0019843 GO:GO:0015935 InterPro:IPR022801
PANTHER:PTHR11831 TIGRFAMs:TIGR01018 HOVERGEN:HBG001135 EMBL:F14517
PRIDE:Q29197 Uniprot:Q29197
Length = 130
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 82/122 (67%), Positives = 101/122 (82%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRR 71
KT+ PRRP+EK RLD EL+L+G +GLR KRE+WRV++ L++IR AAR+LLTLDEKDPRR
Sbjct: 9 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 68
Query: 72 IFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLI 131
+FEG ALLRR+ R G+L+ + KLDY+L L +E FLERRLQT VFK GLA SIHH RVLI
Sbjct: 69 LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAXSIHHXRVLI 128
Query: 132 KQ 133
+Q
Sbjct: 129 RQ 130
>RGD|1594500 [details] [associations]
symbol:LOC365692 "similar to ribosomal protein S9" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR005710
Pfam:PF00163 RGD:1594500 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0015935 InterPro:IPR022801 PANTHER:PTHR11831
TIGRFAMs:TIGR01018 GeneTree:ENSGT00550000074829 OrthoDB:EOG4MW876
IPI:IPI00563280 Ensembl:ENSRNOT00000031124 OMA:RRCHIRI
Uniprot:D3ZTT5
Length = 136
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 64/129 (49%), Positives = 87/129 (67%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGS-FGLRCKREL-WRVQYALSRIRNAARDLLTLDEKDP 69
KT +RP EK L+ EL+L+G + + + + WR S+I AAR+LLTL+EKDP
Sbjct: 11 KTCVTSQRPLEKLCLNQELKLIGGDWRVHSGKNVRWRGSNLPSKIFKAARELLTLEEKDP 70
Query: 70 RRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARV 129
+ +FEG ALLR + R G+L+ + KLDY+L L E+FLER VF+ GLAKSIHHA V
Sbjct: 71 QCLFEGNALLRGLVRVGMLDEGKMKLDYILGLKSENFLER-----VFQLGLAKSIHHAHV 125
Query: 130 LIKQKHIRV 138
LI++ HIR+
Sbjct: 126 LIRRCHIRI 134
>UNIPROTKB|A8MXK4 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR001912 InterPro:IPR005710 Pfam:PF00163
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 GO:GO:0015935
InterPro:IPR022801 PANTHER:PTHR11831 EMBL:AC010492 EMBL:AC012314
TIGRFAMs:TIGR01018 ChiTaRS:RPS9 HGNC:HGNC:10442 IPI:IPI00853062
ProteinModelPortal:A8MXK4 SMR:A8MXK4 STRING:A8MXK4 PRIDE:A8MXK4
Ensembl:ENST00000391751 UCSC:uc002qdy.3 HOGENOM:HOG000015367
ArrayExpress:A8MXK4 Bgee:A8MXK4 Uniprot:A8MXK4
Length = 79
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 45/66 (68%), Positives = 57/66 (86%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRR 71
KT+ PRRP+EK RLD EL+L+G +GLR KRE+WRV++ L++IR AAR+LLTLDEKDPRR
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 72 IFEGQA 77
+FEG A
Sbjct: 71 LFEGSA 76
>UNIPROTKB|F2Z3C0 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR001912 InterPro:IPR005710 Pfam:PF00163
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 GO:GO:0015935
InterPro:IPR022801 PANTHER:PTHR11831 EMBL:AC010492 EMBL:AC012314
TIGRFAMs:TIGR01018 ChiTaRS:RPS9 HGNC:HGNC:10442 IPI:IPI00879512
ProteinModelPortal:F2Z3C0 SMR:F2Z3C0 PRIDE:F2Z3C0
Ensembl:ENST00000448962 ArrayExpress:F2Z3C0 Bgee:F2Z3C0
Uniprot:F2Z3C0
Length = 77
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 45/67 (67%), Positives = 58/67 (86%)
Query: 12 KTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRR 71
KT+ PRRP+EK RLD EL+L+G +GLR KRE+WRV++ L++IR AAR+LLTLDEKDPRR
Sbjct: 11 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70
Query: 72 IFEGQAL 78
+FEG +L
Sbjct: 71 LFEGGSL 77
>RGD|1306825 [details] [associations]
symbol:Imp3 "IMP3, U3 small nucleolar ribonucleoprotein, homolog
(yeast)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 RGD:1306825 GO:GO:0005730
GO:GO:0030529 GO:GO:0019843 EMBL:CH473975 GO:GO:0006364
Gene3D:3.10.290.10 CTD:55272 eggNOG:COG0522 HOGENOM:HOG000213883
HOVERGEN:HBG052121 KO:K14560 OrthoDB:EOG4GB779 InterPro:IPR022801
PANTHER:PTHR11831 OMA:FIEQGHV GeneTree:ENSGT00550000075090
EMBL:BC166985 IPI:IPI00369733 RefSeq:NP_001101622.1 UniGene:Rn.3787
SMR:B2RZ12 STRING:B2RZ12 Ensembl:ENSRNOT00000023456 GeneID:315697
KEGG:rno:315697 UCSC:RGD:1306825 NextBio:669686
Genevestigator:B2RZ12 Uniprot:B2RZ12
Length = 184
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 43/130 (33%), Positives = 72/130 (55%)
Query: 29 ELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRRIFEGQALLRRMFRYGLL 88
ELR++ +GL+ + E R +R AR L L E+DP R+ ALL +++ GL+
Sbjct: 30 ELRVLRRYGLQRREEYTRYNQLSRAVRELARRLRDLPERDPFRVRASAALLDKLYALGLV 89
Query: 89 EATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGRQIVNIPSF 148
T+ L+ +++ SF RRL T++ K +A+ + A ++Q H+RVG +V P+F
Sbjct: 90 P-TRGSLELCDSVSASSFCRRRLPTLLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 149 LVRVDAQNHV 158
LV ++ V
Sbjct: 149 LVTRSMEDFV 158
>UNIPROTKB|F1MZR5 [details] [associations]
symbol:IMP3 "U3 small nucleolar ribonucleoprotein protein
IMP3" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 GO:GO:0005730 GO:GO:0019843
GO:GO:0006364 Gene3D:3.10.290.10 IPI:IPI00712796 UniGene:Bt.49031
InterPro:IPR022801 PANTHER:PTHR11831 OMA:FIEQGHV
GeneTree:ENSGT00550000075090 EMBL:DAAA02052486
Ensembl:ENSBTAT00000016179 Uniprot:F1MZR5
Length = 184
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 47/131 (35%), Positives = 74/131 (56%)
Query: 29 ELRLVGSFGLRCKRELWRVQYALSR-IRNAARDLLTLDEKDPRRIFEGQALLRRMFRYGL 87
ELR++ + L+ +RE + LSR +R AR L L E+DP R+ ALL +++ GL
Sbjct: 30 ELRVLRRYRLQ-RREDYTRYNQLSRAVRELARRLRDLPERDPFRVRSSAALLDKLYALGL 88
Query: 88 LEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGRQIVNIPS 147
+ T+ L+ +T SF RRL TV+ K +A+ + A ++Q H+RVG +V P+
Sbjct: 89 VP-TRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPA 147
Query: 148 FLVRVDAQNHV 158
FLV ++ V
Sbjct: 148 FLVTRSMEDFV 158
>UNIPROTKB|F1SJ73 [details] [associations]
symbol:IMP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
Pfam:PF00163 Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
GO:GO:0005730 GO:GO:0019843 GO:GO:0006364 Gene3D:3.10.290.10
CTD:55272 KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831
OMA:FIEQGHV GeneTree:ENSGT00550000075090 EMBL:CU582918
RefSeq:NP_001230221.1 UniGene:Ssc.2208 Ensembl:ENSSSCT00000002101
GeneID:100151831 KEGG:ssc:100151831 Uniprot:F1SJ73
Length = 184
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 47/131 (35%), Positives = 74/131 (56%)
Query: 29 ELRLVGSFGLRCKRELWRVQYALSR-IRNAARDLLTLDEKDPRRIFEGQALLRRMFRYGL 87
ELR++ + L+ +RE + LSR +R AR L L E+DP R+ ALL +++ GL
Sbjct: 30 ELRVLRRYRLQ-RREDYTRYNQLSRAVRELARRLRDLPERDPFRVRASAALLDKLYALGL 88
Query: 88 LEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGRQIVNIPS 147
+ T+ L+ +T SF RRL TV+ K +A+ + A ++Q H+RVG +V P+
Sbjct: 89 VP-TRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVTFVEQGHVRVGPDVVTDPA 147
Query: 148 FLVRVDAQNHV 158
FLV ++ V
Sbjct: 148 FLVTRSMEDFV 158
>UNIPROTKB|Q3T0M3 [details] [associations]
symbol:IMP3 "U3 small nucleolar ribonucleoprotein protein
IMP3" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
Pfam:PF00163 Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
GO:GO:0005730 GO:GO:0030529 GO:GO:0019843 GO:GO:0006364
Gene3D:3.10.290.10 EMBL:BC102331 IPI:IPI00712796
RefSeq:NP_001073056.1 UniGene:Bt.49031 ProteinModelPortal:Q3T0M3
SMR:Q3T0M3 STRING:Q3T0M3 GeneID:511560 KEGG:bta:511560 CTD:55272
eggNOG:COG0522 HOGENOM:HOG000213883 HOVERGEN:HBG052121
InParanoid:Q3T0M3 KO:K14560 OrthoDB:EOG4GB779 NextBio:20869987
InterPro:IPR022801 PANTHER:PTHR11831 Uniprot:Q3T0M3
Length = 184
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 48/133 (36%), Positives = 74/133 (55%)
Query: 29 ELRLVGSFGLRCKRELWRVQYALSR-IRNAARDLLTLDEKDPRRIFEGQALLRRMFRYGL 87
ELR++ + L+ +RE + LSR +R AR L L E+DP R+ ALL +++ GL
Sbjct: 30 ELRVLRRYRLQ-RREDYTRYNQLSRAVRELARRLRDLPERDPFRVRSSAALLDKLYALGL 88
Query: 88 L--EATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGRQIVNI 145
+ +Q D+V T SF RRL TV+ K +A+ + A ++Q H+RVG +V
Sbjct: 89 VPTRGSQELCDFV---TASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTD 145
Query: 146 PSFLVRVDAQNHV 158
P+FLV ++ V
Sbjct: 146 PAFLVTRSMEDFV 158
>MGI|MGI:1916119 [details] [associations]
symbol:Imp3 "IMP3, U3 small nucleolar ribonucleoprotein,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO;ISA] [GO:0006364 "rRNA processing" evidence=IGI]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0030519 "snoRNP
binding" evidence=ISA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 MGI:MGI:1916119
GO:GO:0005730 GO:GO:0030529 GO:GO:0019843 GO:GO:0030519
GO:GO:0006364 Gene3D:3.10.290.10 CTD:55272 eggNOG:COG0522
HOGENOM:HOG000213883 HOVERGEN:HBG052121 KO:K14560 OrthoDB:EOG4GB779
InterPro:IPR022801 PANTHER:PTHR11831 OMA:FIEQGHV EMBL:BC009145
IPI:IPI00122383 RefSeq:NP_598737.1 UniGene:Mm.12864
ProteinModelPortal:Q921Y2 SMR:Q921Y2 STRING:Q921Y2
PhosphoSite:Q921Y2 PaxDb:Q921Y2 PRIDE:Q921Y2
Ensembl:ENSMUST00000034827 GeneID:102462 KEGG:mmu:102462
UCSC:uc009ptq.1 GeneTree:ENSGT00550000075090 InParanoid:Q921Y2
NextBio:355498 Bgee:Q921Y2 Genevestigator:Q921Y2
GermOnline:ENSMUSG00000032288 Uniprot:Q921Y2
Length = 184
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 42/130 (32%), Positives = 71/130 (54%)
Query: 29 ELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRRIFEGQALLRRMFRYGLL 88
ELR++ + L+ + E R +R AR L L E+DP R+ ALL +++ GL+
Sbjct: 30 ELRVLRRYRLQRREEYTRYNQLSRAVRELARRLRDLPERDPFRVRASAALLDKLYAMGLV 89
Query: 89 EATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGRQIVNIPSF 148
T+ L+ +++ SF RRL T++ K +A+ + A ++Q H+RVG +V P+F
Sbjct: 90 P-TRGSLELCDSVSASSFCRRRLPTLLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 149 LVRVDAQNHV 158
LV ++ V
Sbjct: 149 LVTRSMEDFV 158
>UNIPROTKB|E2RL19 [details] [associations]
symbol:IMP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
Pfam:PF00163 Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
GO:GO:0005730 GO:GO:0019843 GO:GO:0006364 Gene3D:3.10.290.10
InterPro:IPR022801 PANTHER:PTHR11831 OMA:FIEQGHV
GeneTree:ENSGT00550000075090 EMBL:AAEX03016335
Ensembl:ENSCAFT00000028655 NextBio:20861217 Uniprot:E2RL19
Length = 224
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 46/131 (35%), Positives = 74/131 (56%)
Query: 29 ELRLVGSFGLRCKRELWRVQYALSR-IRNAARDLLTLDEKDPRRIFEGQALLRRMFRYGL 87
ELR++ + L+ +RE + LSR +R AR L L E+DP R+ ALL +++ GL
Sbjct: 70 ELRVLRRYRLQ-RREDYTRYNQLSRAVRELARRLRDLPERDPFRVRASAALLDKLYALGL 128
Query: 88 LEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGRQIVNIPS 147
+ T+ L ++T +F RRL TV+ K +A+ + A ++Q H+RVG +V P+
Sbjct: 129 VP-TRGSLALCDSVTASAFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPA 187
Query: 148 FLVRVDAQNHV 158
FLV ++ V
Sbjct: 188 FLVTRSMEDFV 198
>UNIPROTKB|Q9NV31 [details] [associations]
symbol:IMP3 "U3 small nucleolar ribonucleoprotein protein
IMP3" species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR002942 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005730
EMBL:CH471136 GO:GO:0030529 GO:GO:0019843 GO:GO:0006364
Gene3D:3.10.290.10 CleanEx:HS_IMP3 CTD:55272 eggNOG:COG0522
HOGENOM:HOG000213883 HOVERGEN:HBG052121 KO:K14560 OrthoDB:EOG4GB779
InterPro:IPR022801 PANTHER:PTHR11831 EMBL:AY050497 EMBL:AL136913
EMBL:AK001830 EMBL:AK057531 EMBL:AK223121 EMBL:BC006487
EMBL:BC011745 IPI:IPI00019488 RefSeq:NP_060755.1 UniGene:Hs.513043
PDB:2CQJ PDBsum:2CQJ ProteinModelPortal:Q9NV31 SMR:Q9NV31
IntAct:Q9NV31 MINT:MINT-1449196 STRING:Q9NV31 PhosphoSite:Q9NV31
DMDM:52783099 PaxDb:Q9NV31 PeptideAtlas:Q9NV31 PRIDE:Q9NV31
DNASU:55272 Ensembl:ENST00000314852 Ensembl:ENST00000403490
GeneID:55272 KEGG:hsa:55272 UCSC:uc002bat.2 GeneCards:GC15M075931
H-InvDB:HIX0172858 HGNC:HGNC:14497 MIM:612980 neXtProt:NX_Q9NV31
PharmGKB:PA25517 InParanoid:Q9NV31 OMA:FIEQGHV PhylomeDB:Q9NV31
ChiTaRS:IMP3 EvolutionaryTrace:Q9NV31 GenomeRNAi:55272
NextBio:59389 ArrayExpress:Q9NV31 Bgee:Q9NV31 Genevestigator:Q9NV31
GermOnline:ENSG00000177971 Uniprot:Q9NV31
Length = 184
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 46/131 (35%), Positives = 73/131 (55%)
Query: 29 ELRLVGSFGLRCKRELWRVQYALSR-IRNAARDLLTLDEKDPRRIFEGQALLRRMFRYGL 87
ELR++ + L+ +RE + LSR +R AR L L E+D R+ ALL +++ GL
Sbjct: 30 ELRVLRRYRLQ-RREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGL 88
Query: 88 LEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGRQIVNIPS 147
+ T+ L+ +T SF RRL TV+ K +A+ + A ++Q H+RVG +V P+
Sbjct: 89 VP-TRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPA 147
Query: 148 FLVRVDAQNHV 158
FLV ++ V
Sbjct: 148 FLVTRSMEDFV 158
>ZFIN|ZDB-GENE-040426-1062 [details] [associations]
symbol:imp3 "IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast)" species:7955 "Danio rerio"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002942
Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
ZFIN:ZDB-GENE-040426-1062 GO:GO:0003723 GO:GO:0030529
Gene3D:3.10.290.10 eggNOG:COG0522 HOGENOM:HOG000213883
HOVERGEN:HBG052121 OrthoDB:EOG4GB779 InterPro:IPR022801
PANTHER:PTHR11831 OMA:FIEQGHV GeneTree:ENSGT00550000075090
EMBL:CR956623 IPI:IPI00512987 UniGene:Dr.113818 SMR:A5WV64
Ensembl:ENSDART00000100709 Uniprot:A5WV64
Length = 183
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 41/131 (31%), Positives = 72/131 (54%)
Query: 29 ELRLVGSFGLRCKRELWRVQYALSR-IRNAARDLLTLDEKDPRRIFEGQALLRRMFRYGL 87
E++++ + + KRE + LSR IR A+ + LD KD R L +++ GL
Sbjct: 29 EVKVLRKYHIE-KREDYTKYNKLSRNIRELAQKIRDLDAKDGFRSQSTALFLEKLYSVGL 87
Query: 88 LEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGRQIVNIPS 147
+ QN L ++ +F RRL T++ K +A+++ +A I+Q HIRVG +++ P+
Sbjct: 88 IPTKQN-LSLANEVSASAFCRRRLPTIMLKLRMAQNLRNAITFIEQGHIRVGPEVITDPA 146
Query: 148 FLVRVDAQNHV 158
FLV + ++ V
Sbjct: 147 FLVTRNMEDFV 157
>CGD|CAL0005715 [details] [associations]
symbol:orf19.7488 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0034457 "Mpp10
complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030515 "snoRNA binding" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 CGD:CAL0005715 GO:GO:0005622
GO:GO:0019843 EMBL:AACQ01000039 Gene3D:3.10.290.10 eggNOG:COG0522
KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831 RefSeq:XP_718645.1
ProteinModelPortal:Q5AAK1 SMR:Q5AAK1 STRING:Q5AAK1 GeneID:3639726
KEGG:cal:CaO19.7488 Uniprot:Q5AAK1
Length = 183
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 34/139 (24%), Positives = 77/139 (55%)
Query: 21 YEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRRIFEGQALLR 80
+++++ + +++ ++ ++ + + + IR A L L DP RI Q LL
Sbjct: 21 WKQDQGHRDTQVMRTYHIQNREDYHKYNKICGDIRKLAHKLSLLQPTDPFRIKHEQLLLE 80
Query: 81 RMFRYGLLEATQNKL-DYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVG 139
+++ G+L +T++K+ D +TV S RR+ V+ + +A++I A I+Q H+RVG
Sbjct: 81 KLYNMGVL-STKSKISDLENKVTVSSLCRRRIGVVMCRLKMAETISDAVKFIEQGHVRVG 139
Query: 140 RQIVNIPSFLVRVDAQNHV 158
++ P++L+ + ++++
Sbjct: 140 PNVITDPAYLITRNLEDYL 158
>UNIPROTKB|Q5AAK1 [details] [associations]
symbol:IMP3 "Likely U3 snoRNP protein" species:237561
"Candida albicans SC5314" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163
Pfam:PF01479 PROSITE:PS50889 SMART:SM00363 CGD:CAL0005715
GO:GO:0005622 GO:GO:0019843 EMBL:AACQ01000039 Gene3D:3.10.290.10
eggNOG:COG0522 KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831
RefSeq:XP_718645.1 ProteinModelPortal:Q5AAK1 SMR:Q5AAK1
STRING:Q5AAK1 GeneID:3639726 KEGG:cal:CaO19.7488 Uniprot:Q5AAK1
Length = 183
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 34/139 (24%), Positives = 77/139 (55%)
Query: 21 YEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRRIFEGQALLR 80
+++++ + +++ ++ ++ + + + IR A L L DP RI Q LL
Sbjct: 21 WKQDQGHRDTQVMRTYHIQNREDYHKYNKICGDIRKLAHKLSLLQPTDPFRIKHEQLLLE 80
Query: 81 RMFRYGLLEATQNKL-DYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVG 139
+++ G+L +T++K+ D +TV S RR+ V+ + +A++I A I+Q H+RVG
Sbjct: 81 KLYNMGVL-STKSKISDLENKVTVSSLCRRRIGVVMCRLKMAETISDAVKFIEQGHVRVG 139
Query: 140 RQIVNIPSFLVRVDAQNHV 158
++ P++L+ + ++++
Sbjct: 140 PNVITDPAYLITRNLEDYL 158
>POMBASE|SPAC19D5.05c [details] [associations]
symbol:imp3 "U3 snoRNP-associated protein Imp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0030515 "snoRNA
binding" evidence=ISO] [GO:0030532 "small nuclear ribonucleoprotein
complex" evidence=ISO] [GO:0032040 "small-subunit processome"
evidence=ISO] InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163
Pfam:PF01479 PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363
PomBase:SPAC19D5.05c EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0030515 GO:GO:0019843 GO:GO:0006364
GO:GO:0030532 GO:GO:0032040 GO:GO:0005732 Gene3D:3.10.290.10
eggNOG:COG0522 HOGENOM:HOG000213883 KO:K14560 InterPro:IPR022801
PANTHER:PTHR11831 OMA:FIEQGHV PIR:T37965 RefSeq:NP_594903.1
ProteinModelPortal:O13835 SMR:O13835 STRING:O13835
EnsemblFungi:SPAC19D5.05c.1 GeneID:2542514 KEGG:spo:SPAC19D5.05c
OrthoDB:EOG48PQVF NextBio:20803567 Uniprot:O13835
Length = 183
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 41 KRELWRVQYAL--SRIRNAARDLLTLDEKDPRRIFEGQALLRRMFRYGLLEATQNKLDYV 98
KRE ++ +Y + + R A L LD DP R+ LL ++F G+L + D
Sbjct: 40 KREEYQ-KYNIICGKFRQLAHRLSLLDPTDPFRLQYENLLLEKLFDMGILPSKSKMSDIE 98
Query: 99 LALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGRQIVNIPSFLVRVDAQNHV 158
V + RRL ++ K +++ + A LI+Q H+RVG ++ P++LV ++ V
Sbjct: 99 NKANVSAICRRRLPVIMCKLRMSQVVSEATRLIEQGHVRVGPHVITDPAYLVTRSLEDFV 158
Query: 159 GVSLTSSLTQT 169
+ TS + +T
Sbjct: 159 TWTDTSKIKRT 169
>SGD|S000001191 [details] [associations]
symbol:IMP3 "Component of the SSU processome" species:4932
"Saccharomyces cerevisiae" [GO:0030515 "snoRNA binding"
evidence=ISS;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA;TAS] [GO:0034457 "Mpp10 complex" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0032040 "small-subunit processome"
evidence=IMP;IDA] InterPro:IPR001912 InterPro:IPR002942
Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632 PROSITE:PS50889
SMART:SM00363 SGD:S000001191 EMBL:BK006934 GO:GO:0030515
GO:GO:0019843 EMBL:U10397 GO:GO:0006364 GO:GO:0032040
Gene3D:3.10.290.10 eggNOG:COG0522 HOGENOM:HOG000213883 KO:K14560
InterPro:IPR022801 PANTHER:PTHR11831 OMA:FIEQGHV
GeneTree:ENSGT00550000075090 OrthoDB:EOG48PQVF EMBL:X69480
EMBL:AY558388 PIR:S33911 RefSeq:NP_012018.1
ProteinModelPortal:P32899 SMR:P32899 DIP:DIP-5009N IntAct:P32899
MINT:MINT-475962 STRING:P32899 PaxDb:P32899 PeptideAtlas:P32899
EnsemblFungi:YHR148W GeneID:856553 KEGG:sce:YHR148W CYGD:YHR148w
NextBio:982363 Genevestigator:P32899 GermOnline:YHR148W
GO:GO:0034457 Uniprot:P32899
Length = 183
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 35/139 (25%), Positives = 76/139 (54%)
Query: 21 YEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPRRIFEGQALLR 80
+++++ + +++ ++ ++ + + + IR A L L DP R Q LL
Sbjct: 21 WKQDQGHRDTQVMRTYHIQNREDYHKYNRICGDIRRLANKLSLLPPTDPFRRKHEQLLLD 80
Query: 81 RMFRYGLLEATQNKL-DYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVG 139
+++ G+L T++K+ D +TV + RRL ++ + +A++I A I+Q H+RVG
Sbjct: 81 KLYAMGVL-TTKSKISDLENKVTVSAICRRRLPVIMHRLKMAETIQDAVKFIEQGHVRVG 139
Query: 140 RQIVNIPSFLVRVDAQNHV 158
++N P++LV + +++V
Sbjct: 140 PNLINDPAYLVTRNMEDYV 158
>ASPGD|ASPL0000000714 [details] [associations]
symbol:AN6171 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0034457 "Mpp10
complex" evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] InterPro:IPR001912
InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479 PROSITE:PS50889
SMART:SM00363 EMBL:BN001301 GO:GO:0030529 GO:GO:0019843
EMBL:AACD01000105 Gene3D:3.10.290.10 eggNOG:COG0522
HOGENOM:HOG000213883 KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831
OMA:FIEQGHV OrthoDB:EOG48PQVF RefSeq:XP_663775.1
ProteinModelPortal:Q5AZV9 SMR:Q5AZV9 STRING:Q5AZV9
EnsemblFungi:CADANIAT00006839 GeneID:2870733 KEGG:ani:AN6171.2
Uniprot:Q5AZV9
Length = 188
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 37/143 (25%), Positives = 76/143 (53%)
Query: 21 YEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLD-EKDPRRIFEGQALL 79
Y+ + E +++ + L+ + + + +R A L LD + DP R +L
Sbjct: 21 YKSDHAHRESQIIQRYYLQNPVDYKKYSAIVGSLRQLAHKLSALDPDSDPIRQKTESEVL 80
Query: 80 RRMFRYGLLEATQNK---LDYV-LALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKH 135
+++R G+L+ ++ + L + +TV +F RRL V+ ++G+ ++I A I+Q H
Sbjct: 81 DKLWRMGILKQSREQGAGLSRIEREVTVSAFCRRRLAVVMARSGMVENIKTAVTFIEQGH 140
Query: 136 IRVGRQIVNIPSFLVRVDAQNHV 158
+RVG ++V P++LV + ++ V
Sbjct: 141 VRVGSEVVTDPAYLVTRNMEDFV 163
>WB|WBGene00016740 [details] [associations]
symbol:C48B6.2 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR002942 Pfam:PF01479 PROSITE:PS00632 PROSITE:PS50889
SMART:SM00363 GO:GO:0005739 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0005840
GO:GO:0040035 GO:GO:0019843 Gene3D:3.10.290.10 eggNOG:COG0522
HOGENOM:HOG000213883 KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831
OMA:FIEQGHV GeneTree:ENSGT00550000075090 EMBL:FO080896 PIR:T28926
RefSeq:NP_491972.1 ProteinModelPortal:O01513 SMR:O01513
STRING:O01513 PaxDb:O01513 EnsemblMetazoa:C48B6.2.1
EnsemblMetazoa:C48B6.2.2 GeneID:172420 KEGG:cel:CELE_C48B6.2
UCSC:C48B6.2 CTD:172420 WormBase:C48B6.2 InParanoid:O01513
NextBio:875439 Uniprot:O01513
Length = 183
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 35/119 (29%), Positives = 64/119 (53%)
Query: 41 KRELWRVQYALSRIRNAARDLL-TLDEKDPRRIFEGQALLRRMFRYGLLEATQNKLDYVL 99
KRE + + L+ DL+ L E DP R + +L + + GL+ T + L+ +
Sbjct: 40 KREHYALYNTLAAKSREVADLIKNLSESDPFRSKCTEDMLTKFYAAGLVP-TSDTLERIG 98
Query: 100 ALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGRQIVNIPSFLVRVDAQNHV 158
+T SF RRL V+ G+ +S+ A L++Q H+R+G ++V P+F+V +++ +
Sbjct: 99 KVTGASFARRRLPVVMRNIGMCESVKTASDLVEQGHVRIGTKLVTDPAFMVTRSSEDMI 157
>UNIPROTKB|E1BW88 [details] [associations]
symbol:E1BW88 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR002942 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 GO:GO:0005730 GO:GO:0003723
GO:GO:0006364 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 OMA:FIEQGHV GeneTree:ENSGT00550000075090
EMBL:AADN02018211 EMBL:AADN02018212 IPI:IPI00602146
Ensembl:ENSGALT00000026971 Uniprot:E1BW88
Length = 174
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 34/110 (30%), Positives = 56/110 (50%)
Query: 42 RELWRVQYALSRIRNAARDLLTLDEKDPR-RIFEGQALLRRMFRYGLLEATQNKLDYVLA 100
R L R + +R AR LL L R ALL +++ GL+ ++ L
Sbjct: 32 RALRRYRVGAREVRAGARRLLDLSPASAAFRARCAAALLEKLYALGLV-GSRRSLAVCER 90
Query: 101 LTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGRQIVNIPSFLV 150
++ SF RRL ++ K +A+++ HA ++Q H+RVG ++V P+ LV
Sbjct: 91 VSAASFCRRRLPCLLLKLRMAQNLRHAVTFVEQGHVRVGPEVVTDPALLV 140
>TAIR|locus:2143196 [details] [associations]
symbol:AT5G15750 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0006626
"protein targeting to mitochondrion" evidence=RCA]
InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 EMBL:CP002688 GO:GO:0019843
GO:GO:0004812 GO:GO:0022627 Gene3D:3.10.290.10 eggNOG:COG0522
HOGENOM:HOG000213883 KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831
OMA:FIEQGHV EMBL:BT025770 EMBL:AK175183 IPI:IPI00517764
RefSeq:NP_568321.1 UniGene:At.31757 ProteinModelPortal:Q683D4
SMR:Q683D4 STRING:Q683D4 PaxDb:Q683D4 PRIDE:Q683D4 DNASU:831431
EnsemblPlants:AT5G15750.1 GeneID:831431 KEGG:ath:AT5G15750
TAIR:At5g15750 InParanoid:Q683D4 PhylomeDB:Q683D4
ProtClustDB:CLSN2689703 ArrayExpress:Q683D4 Genevestigator:Q683D4
Uniprot:Q683D4
Length = 182
Score = 127 (49.8 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 64 LDEKDPRRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKS 123
+D DP RI LL +++ G++ T+ L L+V SF RRL TV+ A+
Sbjct: 63 MDPADPFRIQMTDMLLEKLYNMGVIP-TRKSLTLTERLSVSSFCRRRLSTVLVHLKFAEH 121
Query: 124 IHHARVLIKQKHIRVGRQIVNIPSFLVRVDAQNHV 158
A I+Q H+RVG + + P+FLV + ++ +
Sbjct: 122 HKEAVTYIEQGHVRVGPETITDPAFLVTRNMEDFI 156
>FB|FBgn0034232 [details] [associations]
symbol:CG4866 species:7227 "Drosophila melanogaster"
[GO:0006412 "translation" evidence=ISS] [GO:0005761 "mitochondrial
ribosome" evidence=ISS] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 EMBL:AE013599 GO:GO:0005622
GO:GO:0019843 Gene3D:3.10.290.10 eggNOG:COG0522 KO:K14560
InterPro:IPR022801 PANTHER:PTHR11831 OMA:FIEQGHV
GeneTree:ENSGT00550000075090 EMBL:AY071534 RefSeq:NP_001163174.1
RefSeq:NP_611224.1 UniGene:Dm.5878 SMR:Q7JZ53 IntAct:Q7JZ53
STRING:Q7JZ53 EnsemblMetazoa:FBtr0086940 GeneID:36976
KEGG:dme:Dmel_CG4866 UCSC:CG4866-RA FlyBase:FBgn0034232
InParanoid:Q7JZ53 OrthoDB:EOG42281Z GenomeRNAi:36976 NextBio:801327
Uniprot:Q7JZ53
Length = 181
Score = 122 (48.0 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 36/131 (27%), Positives = 66/131 (50%)
Query: 29 ELRLVGSFGLRCKRELWRVQYALSR-IRNAARDLLTLDEKDPRRIFEGQALLRRMFRYGL 87
E +++ F ++ KRE + LSR IR A + LD +P + LL ++ G+
Sbjct: 29 ENKILRRFHIQ-KREDYTKYNKLSREIRELAERIAKLDASEPFKTEATTMLLNKLHAMGV 87
Query: 88 LEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGRQIVNIPS 147
Q L+ ++ F RRL ++ K +++ + A LI+ H+RVG +++ P+
Sbjct: 88 SN-DQLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVRVGPEMIKDPA 146
Query: 148 FLVRVDAQNHV 158
FLV + ++ V
Sbjct: 147 FLVSRNLEDFV 157
>DICTYBASE|DDB_G0278983 [details] [associations]
symbol:imp3 "U3 small nucleolar ribonucleoprotein
protein" species:44689 "Dictyostelium discoideum" [GO:0005615
"extracellular space" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0034457 "Mpp10 complex" evidence=ISS] [GO:0006364
"rRNA processing" evidence=ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030515 "snoRNA binding" evidence=ISS]
InterPro:IPR002942 PROSITE:PS50889 SMART:SM00363
dictyBase:DDB_G0278983 GO:GO:0005615 GenomeReviews:CM000152_GR
EMBL:AAFI02000026 GO:GO:0030515 GO:GO:0006364 eggNOG:COG0522
KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831 OMA:FIEQGHV
GO:GO:0034457 RefSeq:XP_641888.1 ProteinModelPortal:Q54XG2
STRING:Q54XG2 PRIDE:Q54XG2 EnsemblProtists:DDB0302412
GeneID:8621814 KEGG:ddi:DDB_G0278983 Uniprot:Q54XG2
Length = 177
Score = 114 (45.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 29/140 (20%), Positives = 67/140 (47%)
Query: 12 KTFKKPR-RPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEKDPR 70
K KK + Y +E ++ +G FGL+ K E +++ ++ +++ L ++DP
Sbjct: 13 KLLKKTNFKHYRREN-QKDVENIGRFGLKGKEEYAEYTKLVAQYKHVLKEISDLSDQDPV 71
Query: 71 RIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVL 130
+ L +++ G+++ Q ++ + SF RR ++ K A+ + A L
Sbjct: 72 KQKLLSDLSEKLYNMGVIDLKQPS--ELVKVNASSFCRRRAVVMLVKKKFAEHLTQAFGL 129
Query: 131 IKQKHIRVGRQIVNIPSFLV 150
+ H+R+G + + P+ ++
Sbjct: 130 LSHGHVRIGPETIQDPALII 149
>TIGR_CMR|GSU_2832 [details] [associations]
symbol:GSU_2832 "ribosomal protein S4" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001912
InterPro:IPR002942 InterPro:IPR005709 InterPro:IPR018079
Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632 PROSITE:PS50889
SMART:SM00363 GO:GO:0006412 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003735 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831
Gene3D:1.10.1050.10 HAMAP:MF_01306_B TIGRFAMs:TIGR01017
HOGENOM:HOG000221003 KO:K02986 ProtClustDB:PRK05327 OMA:THGHILV
RefSeq:NP_953875.1 ProteinModelPortal:Q749B2 SMR:Q749B2
PRIDE:Q749B2 GeneID:2686834 KEGG:gsu:GSU2832 PATRIC:22028509
BioCyc:GSUL243231:GH27-2784-MONOMER Uniprot:Q749B2
Length = 208
Score = 114 (45.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 33/89 (37%), Positives = 47/89 (52%)
Query: 64 LDEKDP-RRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAK 122
L EK RRI+ +L + FR EA ++L V + S LERRL VV++ G A
Sbjct: 57 LREKQKVRRIY---GILEKQFRSYFQEA--DRLKGVTGENLLSLLERRLDNVVYRLGFAA 111
Query: 123 SIHHARVLIKQKHIRVGRQIVNIPSFLVR 151
S AR+L++ H + + NIPS +R
Sbjct: 112 SRTEARILVRHNHFTLNGKKANIPSIQLR 140
>TIGR_CMR|CPS_0625 [details] [associations]
symbol:CPS_0625 "ribosomal protein S4" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005709
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 GO:GO:0006412 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015935
Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 Gene3D:1.10.1050.10 HAMAP:MF_01306_B
TIGRFAMs:TIGR01017 HOGENOM:HOG000221003 KO:K02986 OMA:THGHILV
RefSeq:YP_267375.1 ProteinModelPortal:Q488Y9 SMR:Q488Y9
STRING:Q488Y9 PRIDE:Q488Y9 GeneID:3519538 KEGG:cps:CPS_0625
PATRIC:21464577 BioCyc:CPSY167879:GI48-712-MONOMER Uniprot:Q488Y9
Length = 206
Score = 113 (44.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 49/161 (30%), Positives = 73/161 (45%)
Query: 8 RNYGKTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEK 67
R G K RR L + +R + + +CK E Q+ R R + + +++
Sbjct: 3 RYLGPKLKLSRREGTDLFLKSGVRAIDT---KCKIETIPGQHGARRGRLSDYGVQLREKQ 59
Query: 68 DPRRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHA 127
RRIF +L + F EA + K + + LE RL VV++ G A + A
Sbjct: 60 KVRRIF---GVLEKQFSNYYKEAARQKGN--TGENLLQLLETRLDNVVYRMGYASTRAEA 114
Query: 128 RVLIKQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQ 168
R L+ K I V +VNIPSF V+ A++ V V S TQ
Sbjct: 115 RQLVSHKAIVVNGVVVNIPSFTVK--AEDTVSVR-EKSKTQ 152
>TIGR_CMR|SO_0255 [details] [associations]
symbol:SO_0255 "ribosomal protein S4" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005709
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 GO:GO:0006412 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015935
Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 Gene3D:1.10.1050.10 HAMAP:MF_01306_B
TIGRFAMs:TIGR01017 HOGENOM:HOG000221003 KO:K02986
ProtClustDB:PRK05327 OMA:THGHILV RefSeq:NP_715895.1
ProteinModelPortal:P59131 SMR:P59131 GeneID:1168138
KEGG:son:SO_0255 PATRIC:23520203 Uniprot:P59131
Length = 206
Score = 113 (44.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 46/161 (28%), Positives = 73/161 (45%)
Query: 8 RNYGKTFKKPRRPYEKERLDAELRLVGSFGLRCKRELWRVQYALSRIRNAARDLLTLDEK 67
R G K RR L + +R + S +CK E Q+ + R + L +++
Sbjct: 3 RYLGPKLKLSRREGTDLFLKSGVRAIDS---KCKLESAPGQHGARKPRLSEYGLQLREKQ 59
Query: 68 DPRRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHA 127
RRI+ +L + FR EA + K + + LE RL VV++ G + +
Sbjct: 60 KVRRIY---GVLEKQFRNYYKEAARLKGN--TGENLLQLLETRLDNVVYRMGFGATRAES 114
Query: 128 RVLIKQKHIRVGRQIVNIPSFLVRVDAQNHVGVSLTSSLTQ 168
R L+ K + V ++VNIPSF +V A + V + S TQ
Sbjct: 115 RQLVSHKSVMVNGRVVNIPSF--KVSANDVVSIR-EKSRTQ 152
>TIGR_CMR|APH_0989 [details] [associations]
symbol:APH_0989 "ribosomal protein S4" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005709
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 GO:GO:0006412 GO:GO:0003735
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0019843 GO:GO:0015935
Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 Gene3D:1.10.1050.10 HAMAP:MF_01306_B
TIGRFAMs:TIGR01017 KO:K02986 RefSeq:YP_505552.1
ProteinModelPortal:Q2GJ99 STRING:Q2GJ99 GeneID:3930826
KEGG:aph:APH_0989 PATRIC:20950708 HOGENOM:HOG000221004 OMA:YRCKPGD
ProtClustDB:PRK05327 BioCyc:APHA212042:GHPM-999-MONOMER
Uniprot:Q2GJ99
Length = 204
Score = 112 (44.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 81 RMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGR 140
R R L+A + K D + LE RL +VV+ AGL ++ AR L+ KH+ V
Sbjct: 67 RQLRNVFLKAYRKKGD--TGDNLVGALESRLASVVYSAGLVPTMFSARQLVSHKHVTVNG 124
Query: 141 QIVNIPSFLVR 151
++VNIPSF V+
Sbjct: 125 RVVNIPSFSVK 135
>TIGR_CMR|CHY_2282 [details] [associations]
symbol:CHY_2282 "ribosomal protein S4" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005709 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0015935 Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 Gene3D:1.10.1050.10 HAMAP:MF_01306_B
TIGRFAMs:TIGR01017 HOGENOM:HOG000221003 KO:K02986
ProtClustDB:PRK05327 OMA:THGHILV RefSeq:YP_361091.1
ProteinModelPortal:Q3A9U3 SMR:Q3A9U3 STRING:Q3A9U3 PRIDE:Q3A9U3
GeneID:3726616 KEGG:chy:CHY_2282 PATRIC:21277635
BioCyc:CHYD246194:GJCN-2281-MONOMER Uniprot:Q3A9U3
Length = 208
Score = 109 (43.4 bits), Expect = 0.00013, P = 0.00013
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 85 YGLLEATQNKLDYVLA-----LTVESFL---ERRLQTVVFKAGLAKSIHHARVLIKQKHI 136
YG+LEA Q + + +A +T E+ L ERRL VV++ GLA+S AR L++
Sbjct: 67 YGVLEA-QFRRYFEMAERQPGITGENLLVILERRLDNVVYRLGLAESRAQARQLVRHNFF 125
Query: 137 RVGRQIVNIPSFLVRV 152
V + VNIPS+LV+V
Sbjct: 126 TVNGRKVNIPSYLVKV 141
>UNIPROTKB|O06325 [details] [associations]
symbol:rpsD "30S ribosomal protein S4" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001912
InterPro:IPR002942 InterPro:IPR005709 InterPro:IPR018079
Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632 PROSITE:PS50889
SMART:SM00363 GO:GO:0005829 GO:GO:0005886 GO:GO:0040007
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842583 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10 eggNOG:COG0522
InterPro:IPR022801 PANTHER:PTHR11831 Gene3D:1.10.1050.10
HAMAP:MF_01306_B TIGRFAMs:TIGR01017 KO:K02986 HOGENOM:HOG000221004
ProtClustDB:PRK05327 OMA:THGHILV PIR:G70565 RefSeq:NP_217975.1
RefSeq:NP_338090.1 RefSeq:YP_006516947.1 ProteinModelPortal:O06325
SMR:O06325 PhosSite:P12071746 PRIDE:O06325
EnsemblBacteria:EBMYCT00000000856 EnsemblBacteria:EBMYCT00000072320
GeneID:13317065 GeneID:887620 GeneID:926628 KEGG:mtc:MT3565
KEGG:mtu:Rv3458c KEGG:mtv:RVBD_3458c PATRIC:18129567
TubercuList:Rv3458c Uniprot:O06325
Length = 201
Score = 106 (42.4 bits), Expect = 0.00030, P = 0.00030
Identities = 34/103 (33%), Positives = 50/103 (48%)
Query: 48 QYALSRIRNAARDLLTLDEKDPRRIFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFL 107
Q+ +RI+ + LL L EK R G ++ + FR EA + L L
Sbjct: 35 QHGRARIKESEY-LLQLQEKQKARFTYG--VMEKQFRRYYEEAVRQPGKTGEELL--KIL 89
Query: 108 ERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGRQIVNIPSFLV 150
E RL V+++AGLA++ AR L+ H V VN+PS+ V
Sbjct: 90 ESRLDNVIYRAGLARTRRMARQLVSHGHFNVNGVHVNVPSYRV 132
>UNIPROTKB|P0C486 [details] [associations]
symbol:rps4 "30S ribosomal protein S4, chloroplastic"
species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005709
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 GO:GO:0009536 GO:GO:0009570
GO:GO:0016020 GO:GO:0006412 EMBL:AY522331 GO:GO:0003735
GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 ProtClustDB:CHL00113 Gene3D:1.10.1050.10
HAMAP:MF_01306_B TIGRFAMs:TIGR01017 RefSeq:NP_039385.1
ProteinModelPortal:P0C486 SMR:P0C486 PRIDE:P0C486 GeneID:3131457
KEGG:osa:3131457 Gramene:P0C486 HOGENOM:HOG000221003 KO:K02986
Genevestigator:P0C486 Uniprot:P0C486
Length = 201
Score = 106 (42.4 bits), Expect = 0.00030, P = 0.00030
Identities = 30/88 (34%), Positives = 45/88 (51%)
Query: 62 LTLDEKDPRRIFEGQALLRRMFRY-GLLEATQNKLDYVLALTVESFLERRLQTVVFKAGL 120
+ L EK R G R++ RY + ++ VL LE RL ++F+ G+
Sbjct: 46 IRLQEKQKLRFHYGLTE-RQLLRYVHIAGKAKSSTGQVLL----QLLEMRLDNILFRLGM 100
Query: 121 AKSIHHARVLIKQKHIRVGRQIVNIPSF 148
A +I AR L+ +HI V +IV+IPSF
Sbjct: 101 ASTIPEARQLVNHRHILVNGRIVDIPSF 128
>UNIPROTKB|P0C487 [details] [associations]
symbol:rps4 "30S ribosomal protein S4, chloroplastic"
species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005709 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0009536
GO:GO:0009570 GO:GO:0016020 GO:GO:0006412 EMBL:AY522329
GO:GO:0003735 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
InterPro:IPR022801 PANTHER:PTHR11831 ProtClustDB:CHL00113
Gene3D:1.10.1050.10 HAMAP:MF_01306_B TIGRFAMs:TIGR01017
RefSeq:YP_654216.1 ProteinModelPortal:P0C487 SMR:P0C487
PRIDE:P0C487 GeneID:4126886 Gramene:P0C487 Uniprot:P0C487
Length = 201
Score = 106 (42.4 bits), Expect = 0.00030, P = 0.00030
Identities = 30/88 (34%), Positives = 45/88 (51%)
Query: 62 LTLDEKDPRRIFEGQALLRRMFRY-GLLEATQNKLDYVLALTVESFLERRLQTVVFKAGL 120
+ L EK R G R++ RY + ++ VL LE RL ++F+ G+
Sbjct: 46 IRLQEKQKLRFHYGLTE-RQLLRYVHIAGKAKSSTGQVLL----QLLEMRLDNILFRLGM 100
Query: 121 AKSIHHARVLIKQKHIRVGRQIVNIPSF 148
A +I AR L+ +HI V +IV+IPSF
Sbjct: 101 ASTIPEARQLVNHRHILVNGRIVDIPSF 128
>UNIPROTKB|P0C488 [details] [associations]
symbol:rps4 "30S ribosomal protein S4, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005709 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0009536
GO:GO:0009570 GO:GO:0016020 GO:GO:0006412 EMBL:X15901 EMBL:AY522330
GenomeReviews:AY522330_GR GO:GO:0003735 GO:GO:0019843 EMBL:AC074232
GO:GO:0015935 Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 ProtClustDB:CHL00113 Gene3D:1.10.1050.10
HAMAP:MF_01306_B TIGRFAMs:TIGR01017 RefSeq:NP_039385.1
GeneID:3131457 KEGG:osa:3131457 KO:K02986 PIR:JQ0225
ProteinModelPortal:P0C488 SMR:P0C488 STRING:P0C488
EnsemblPlants:LOC_Os04g16738.1 EnsemblPlants:LOC_Os04g16764.1
EnsemblPlants:LOC_Os10g38214.1 EnsemblPlants:LOC_Osp1g00360.1
Gramene:P0C488 OMA:ASYQCKP Uniprot:P0C488
Length = 201
Score = 106 (42.4 bits), Expect = 0.00030, P = 0.00030
Identities = 30/88 (34%), Positives = 45/88 (51%)
Query: 62 LTLDEKDPRRIFEGQALLRRMFRY-GLLEATQNKLDYVLALTVESFLERRLQTVVFKAGL 120
+ L EK R G R++ RY + ++ VL LE RL ++F+ G+
Sbjct: 46 IRLQEKQKLRFHYGLTE-RQLLRYVHIAGKAKSSTGQVLL----QLLEMRLDNILFRLGM 100
Query: 121 AKSIHHARVLIKQKHIRVGRQIVNIPSF 148
A +I AR L+ +HI V +IV+IPSF
Sbjct: 101 ASTIPEARQLVNHRHILVNGRIVDIPSF 128
>UNIPROTKB|Q6ENH2 [details] [associations]
symbol:rps4 "30S ribosomal protein S4, chloroplastic"
species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005709
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 EMBL:AP006728
GO:GO:0015935 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 RefSeq:YP_052751.1 ProteinModelPortal:Q6ENH2
SMR:Q6ENH2 GeneID:2885947 Gramene:Q6ENH2 ProtClustDB:CHL00113
Gene3D:1.10.1050.10 HAMAP:MF_01306_B TIGRFAMs:TIGR01017
Uniprot:Q6ENH2
Length = 201
Score = 106 (42.4 bits), Expect = 0.00030, P = 0.00030
Identities = 30/88 (34%), Positives = 45/88 (51%)
Query: 62 LTLDEKDPRRIFEGQALLRRMFRY-GLLEATQNKLDYVLALTVESFLERRLQTVVFKAGL 120
+ L EK R G R++ RY + ++ VL LE RL ++F+ G+
Sbjct: 46 IRLQEKQKLRFHYGLTE-RQLLRYVHIAGKAKSSTGQVLL----QLLEMRLDNILFRLGM 100
Query: 121 AKSIHHARVLIKQKHIRVGRQIVNIPSF 148
A +I AR L+ +HI V +IV+IPSF
Sbjct: 101 ASTIPEARQLVNHRHILVNGRIVDIPSF 128
>GENEDB_PFALCIPARUM|PF14_0584 [details] [associations]
symbol:PF14_0584 "ribosomal protein S4,
putative" species:5833 "Plasmodium falciparum" [GO:0005763
"mitochondrial small ribosomal subunit" evidence=ISS]
InterPro:IPR002942 Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
GO:GO:0003723 EMBL:AE014187 GO:GO:0005763 Gene3D:3.10.290.10
HOGENOM:HOG000213883 KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831
OMA:FIEQGHV RefSeq:XP_001348758.1 ProteinModelPortal:Q8IKM0
EnsemblProtists:PF14_0584:mRNA GeneID:812166 KEGG:pfa:PF14_0584
EuPathDB:PlasmoDB:PF3D7_1461200 ProtClustDB:CLSZ2733873
Uniprot:Q8IKM0
Length = 159
Score = 101 (40.6 bits), Expect = 0.00045, P = 0.00045
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 101 LTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGRQIVNIPSFLVRVDAQNHV 158
+TV SF RRL ++F+ ++I A I+ +IR+G ++N PSF + + ++H+
Sbjct: 75 ITVSSFCRRRLAVLLFRLKFVQTIKLAITYIQHGNIRIGNNVINNPSFHINRNMEDHI 132
>UNIPROTKB|Q8IKM0 [details] [associations]
symbol:PF14_0584 "Mitochondrial ribosomal protein S4/S9,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005763
"mitochondrial small ribosomal subunit" evidence=ISS]
InterPro:IPR002942 Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
GO:GO:0003723 EMBL:AE014187 GO:GO:0005763 Gene3D:3.10.290.10
HOGENOM:HOG000213883 KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831
OMA:FIEQGHV RefSeq:XP_001348758.1 ProteinModelPortal:Q8IKM0
EnsemblProtists:PF14_0584:mRNA GeneID:812166 KEGG:pfa:PF14_0584
EuPathDB:PlasmoDB:PF3D7_1461200 ProtClustDB:CLSZ2733873
Uniprot:Q8IKM0
Length = 159
Score = 101 (40.6 bits), Expect = 0.00045, P = 0.00045
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 101 LTVESFLERRLQTVVFKAGLAKSIHHARVLIKQKHIRVGRQIVNIPSFLVRVDAQNHV 158
+TV SF RRL ++F+ ++I A I+ +IR+G ++N PSF + + ++H+
Sbjct: 75 ITVSSFCRRRLAVLLFRLKFVQTIKLAITYIQHGNIRIGNNVINNPSFHINRNMEDHI 132
>TIGR_CMR|CJE_1766 [details] [associations]
symbol:CJE_1766 "ribosomal protein S4" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0006450 "regulation of translational fidelity" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001912
InterPro:IPR002942 InterPro:IPR005709 InterPro:IPR018079
Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632 PROSITE:PS50889
SMART:SM00363 GO:GO:0006412 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0003735 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831
Gene3D:1.10.1050.10 HAMAP:MF_01306_B TIGRFAMs:TIGR01017
HOGENOM:HOG000221003 KO:K02986 ProtClustDB:PRK05327 OMA:THGHILV
RefSeq:YP_179738.1 ProteinModelPortal:Q5HSJ7 SMR:Q5HSJ7
STRING:Q5HSJ7 GeneID:3232393 KEGG:cjr:CJE1766 PATRIC:20045342
BioCyc:CJEJ195099:GJC0-1796-MONOMER Uniprot:Q5HSJ7
Length = 208
Score = 104 (41.7 bits), Expect = 0.00061, P = 0.00061
Identities = 45/144 (31%), Positives = 63/144 (43%)
Query: 18 RRPYEK--ERLDAELRLVGSFGLRCKRELWRVQYAL----SRIRNAARDLLTLDEKDPRR 71
R P EK R L L G L K L + YA +R + L L EK +
Sbjct: 5 RGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHGARKGKISEYGLQLREKQKAK 64
Query: 72 IFEGQALLRRMFRYGLLEATQNKLDYVLALTVESFLERRLQTVVFKAGLAKSIHHARVLI 131
G + + FR EA + + + + L LE+RL VV++ G A + AR L+
Sbjct: 65 FMYGVS--EKQFRRLFAEAARREGNTGVLLI--QLLEQRLDNVVYRMGFATTRRFARQLV 120
Query: 132 KQKHIRVGRQIVNIPSFLVRVDAQ 155
HI V + V+IPSF V A+
Sbjct: 121 THGHILVNGKRVDIPSFRVEAGAK 144
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.139 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 197 184 0.00078 110 3 11 22 0.38 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 58
No. of states in DFA: 584 (62 KB)
Total size of DFA: 140 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.04u 0.11s 15.15t Elapsed: 00:00:01
Total cpu time: 15.04u 0.11s 15.15t Elapsed: 00:00:01
Start: Sat May 11 05:29:21 2013 End: Sat May 11 05:29:22 2013