Your job contains 1 sequence.
>046293
MNAQNAAGQSNYEDSLYVPEVALNRKPHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSK
ICKESNDIIRKEYVCFKEGQARQSKVVNRKRRRGIIRGGCSANLVVVKYEFGKYMVRIFV
EEHNHTLSSPRMVHLLRSHRSMSAVQKSLSQQLAAVNIPTYILYEHFQSEKEKNSSFFYN
IKAGCDDRITHCFWADAICRRAYKFYGDVIVFDTTYNTNRYNMIFAPFVGVNNHGQTIIF
GCGFLSDETTESFLWLFEQFKEAMPGDDPKMIITDQDPAMILHLAYWHILNKFLERLSKT
VHTENYRHFQKCIWESNTIEKFDALWKDVIDKAKLIENEWLQGVYEIRSKWVHAYVNHVF
SAGMSSSNRAESNHAIFRRALSQQRHEELIADNKDLNERPMLRLPLQIEKKMSEIYTCEI
FYIFQDELWNSLLHAIELVKENEDCLVYNVVNQEDGVSKVFEVLYDKKLDFVSCICKKFK
SEGIPCTHMLALFKKLQISFMPNIYILKRWTKAAKLERVMDRDGVEINDCSNKSILLRRT
KLFQFTSNVIDKVVLSEVASEIVIENLEDALEKVKLVMESCRSEGVLEKNSGMQQPHFNE
PLQIRAKGCGKRLKGGKEKAKEKAKGKDKGRRCNGCGLVGQSHDKRNCPLLIKRCHYNST
GALTKATKLRTNSNPNCVLISITSLKDVELWKHLL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046293
(695 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2121060 - symbol:FRS5 "FAR1-related sequence 5... 434 1.1e-56 2
TAIR|locus:2062606 - symbol:FRS2 "FAR1-related sequence 2... 493 1.7e-46 1
TAIR|locus:2035144 - symbol:FRS6 "FAR1-related sequence 6... 341 5.1e-46 3
TAIR|locus:2090394 - symbol:FHY3 "far-red elongated hypoc... 396 1.6e-44 2
TAIR|locus:2016259 - symbol:FRS8 "FAR1-related sequence 8... 298 1.5e-43 3
TAIR|locus:2014639 - symbol:FRS4 "FAR1-related sequence 4... 348 1.3e-42 2
TAIR|locus:2082420 - symbol:FRS7 "FAR1-related sequence 7... 436 1.4e-38 2
TAIR|locus:2129665 - symbol:FAR1 "FAR-RED IMPAIRED RESPON... 419 4.2e-37 2
TAIR|locus:2059304 - symbol:FRS3 "FAR1-related sequence 3... 411 1.9e-35 1
TAIR|locus:2144930 - symbol:FRS12 "FAR1-related sequence ... 409 4.1e-35 2
TAIR|locus:2012828 - symbol:FRS11 "FAR1-related sequence ... 286 1.4e-31 2
TAIR|locus:2182778 - symbol:FRS10 "FAR1-related sequence ... 270 3.8e-29 2
TAIR|locus:2121003 - symbol:FRS9 "FAR1-related sequence 9... 325 1.8e-26 1
TAIR|locus:2097543 - symbol:AT3G59470 species:3702 "Arabi... 151 4.6e-08 1
TAIR|locus:2041041 - symbol:AT2G43280 species:3702 "Arabi... 130 5.2e-06 1
TAIR|locus:2135738 - symbol:AT4G12850 "AT4G12850" species... 125 8.0e-06 1
TAIR|locus:2079651 - symbol:AT3G07500 "AT3G07500" species... 115 0.00044 1
>TAIR|locus:2121060 [details] [associations]
symbol:FRS5 "FAR1-related sequence 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL035538
EMBL:AL161593 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000241939
EMBL:AY136457 IPI:IPI00529649 PIR:T05645 RefSeq:NP_195531.1
UniGene:At.31195 UniGene:At.48951 PRIDE:Q9SZL8
EnsemblPlants:AT4G38180.1 GeneID:829974 KEGG:ath:AT4G38180
TAIR:At4g38180 eggNOG:NOG236180 InParanoid:Q9SZL8 OMA:RNNRQKS
PhylomeDB:Q9SZL8 ProtClustDB:CLSN2685396 Genevestigator:Q9SZL8
Uniprot:Q9SZL8
Length = 788
Score = 434 (157.8 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 86/229 (37%), Positives = 129/229 (56%)
Query: 162 ILYEHFQSEKEKNSSFFYNIKAGCDDRITHCFWADAICRRAYKFYGDVIVFDTTYNTNRY 221
+L ++ + N +FFY+++ D + + FWAD + +GD + FDTTY +NRY
Sbjct: 252 LLLDYLRQMNADNPNFFYSVQGSEDQSVGNVFWADPKAIMDFTHFGDTVTFDTTYRSNRY 311
Query: 222 NMIFAPFVGVNNHGQTIIFGCGFLSDETTESFLWLFEQFKEAMPGDDPKMIITDQDP--- 278
+ FAPF GVN+HGQ I+FGC F+ +ET SF+WLF + AM P I TD D
Sbjct: 312 RLPFAPFTGVNHHGQPILFGCAFIINETEASFVWLFNTWLAAMSAHPPVSITTDHDAVIR 371
Query: 279 AMILHL--------AYWHILNKFLERLSKTV--HTENYRHFQKCIWESNTIEKFDALWKD 328
A I+H+ WHIL K E+LS H F KC+ + ++E F+ W
Sbjct: 372 AAIMHVFPGARHRFCKWHILKKCQEKLSHVFLKHPSFESDFHKCVNLTESVEDFERCWFS 431
Query: 329 VIDKAKLIENEWLQGVYEIRSKWVHAYVNHVFSAGMSSSNRAESNHAIF 377
++DK +L ++EWLQ +Y R +WV Y+ F A MS ++R++S ++ F
Sbjct: 432 LLDKYELRDHEWLQAIYSDRRQWVPVYLRDTFFADMSLTHRSDSINSYF 480
Score = 338 (124.0 bits), Expect = 2.8e-45, Sum P(2) = 2.8e-45
Identities = 83/287 (28%), Positives = 143/287 (49%)
Query: 309 FQKCIWESNTIEKFDALWKDVIDKAKLIENEWLQGVYEIRSKWVHAYVNHVFSAGMSSSN 368
F KC+ + ++E F+ W ++DK +L ++EWLQ +Y R +WV Y+ F A MS ++
Sbjct: 412 FHKCVNLTESVEDFERCWFSLLDKYELRDHEWLQAIYSDRRQWVPVYLRDTFFADMSLTH 471
Query: 369 RAESNHAIF-----------------RRALSQQRHEELIADNKDLNERPMLRLPLQIEKK 411
R++S ++ F +AL + +E+ AD +N P+L+ P +EK+
Sbjct: 472 RSDSINSYFDGYINASTNLSQFFKLYEKALESRLEKEVKADYDTMNSPPVLKTPSPMEKQ 531
Query: 412 MSEIYTCEIFYIFQDELWNSLLHAIELVKENEDCLVYNVVNQEDGVSKVFEVLYDKKLDF 471
SE+YT ++F FQ+EL +L ++ D + Y V + K V ++
Sbjct: 532 ASELYTRKLFMRFQEELVGTLTFMASKADDDGDLVTYQVAKYGEA-HKAHFVKFNVLEMR 590
Query: 472 VSCICKKFKSEGIPCTHMLALFKKLQISFMPNIYILKRWTKAAKLERVMDRDGVEINDCS 531
+C C+ F+ GI C H+LA+F+ + +P YILKRWT+ AK + D +
Sbjct: 591 ANCSCQMFEFSGIICRHILAVFRVTNLLTLPPYYILKRWTRNAKSSVIFDDYNLHAYANY 650
Query: 532 NKSILLRRTKLFQFTSNVIDKVVLSEVASEIVIENLEDALEKVKLVM 578
+S +R L SN + + S ++ + L++A + V L M
Sbjct: 651 LESHTVRYNTLRHKASNFVQEAGKSLYTCDVAVVALQEAAKTVSLAM 697
Score = 217 (81.4 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 50/146 (34%), Positives = 80/146 (54%)
Query: 23 LNRKPHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSKICKESNDIIRKEYVCFKEG--- 79
L+ +P+ G +F++ + A FY YA+ GFS +++SS+ + II++++VC KEG
Sbjct: 69 LDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRN 128
Query: 80 -QARQSKVVNXXXXXXXXXXXCSANLVVVKYEFGKYMVRIFVEEHNHTLSSPRMVHLLRS 138
+++K C A+L V + GK++V FV++HNH L P VH LRS
Sbjct: 129 MNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQVHCLRS 188
Query: 139 HRSMSAVQKSLSQQLAAVNI-PTYIL 163
HR +S K+L L A + P I+
Sbjct: 189 HRQISGPAKTLIDTLQAAGMGPRRIM 214
>TAIR|locus:2062606 [details] [associations]
symbol:FRS2 "FAR1-related sequence 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC005700
HOGENOM:HOG000090708 InterPro:IPR018289 Pfam:PF10551 EMBL:AK228730
EMBL:AK221503 IPI:IPI00520357 IPI:IPI00530517 PIR:G84730
RefSeq:NP_001077991.1 RefSeq:NP_001118431.1 RefSeq:NP_180784.2
RefSeq:NP_973580.1 UniGene:At.13189 UniGene:At.67147
EnsemblPlants:AT2G32250.1 EnsemblPlants:AT2G32250.3 GeneID:817785
KEGG:ath:AT2G32250 TAIR:At2g32250 eggNOG:NOG304016
InParanoid:Q3EBQ3 OMA:CKHAILV PhylomeDB:Q3EBQ3
ProtClustDB:CLSN2681190 Genevestigator:Q3EBQ3 Uniprot:Q3EBQ3
Length = 807
Score = 493 (178.6 bits), Expect = 1.7e-46, P = 1.7e-46
Identities = 116/383 (30%), Positives = 191/383 (49%)
Query: 18 VPEVALNRKPHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSKICKESNDIIRKEYVCFK 77
V + A + G F++ + AY FY++YA+ GF I I +S+ K S I + C +
Sbjct: 29 VAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSR 88
Query: 78 EGQARQSKVVNXXXXXXXXXXXCSANLVVVKYEFGKYMVRIFVEEHNHTLSSPRMVHLLR 137
G R+ C A L + + E K+++ FV+EHNH + +R
Sbjct: 89 FGTKREK--ATAINPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHEICPDDFYVSVR 146
Query: 138 SHRSMS---AVQKSLSQQLAAVNIPTYILYEHFQSEKEKNSSFFYNIKAGCDDRITHCFW 194
+ A++K L QLA +L EHF ++K FFY + D R+ + FW
Sbjct: 147 GKNKPAGALAIKKGL--QLALEEEDLKLLLEHFMEMQDKQPGFFYAVDFDSDKRVRNVFW 204
Query: 195 ADAICRRAYKFYGDVIVFDTTYNTNRYNMIFAPFVGVNNHGQTIIFGCGFLSDETTESFL 254
DA + Y + DV++FDT Y N Y + FAPF+GV++H Q ++ GC + + + ++
Sbjct: 205 LDAKAKHDYCSFSDVVLFDTFYVRNGYRIPFAPFIGVSHHRQYVLLGCALIGEVSESTYS 264
Query: 255 WLFEQFKEAMPGDDPKMIITDQDPAM----------ILHL-AYWHILNKFLERLSKTVHT 303
WLF + +A+ G P ++ITDQD + + H+ W +L+K E L+ V
Sbjct: 265 WLFRTWLKAVGGQAPGVMITDQDKLLSDIVVEVFPDVRHIFCLWSVLSKISEMLNPFVSQ 324
Query: 304 EN--YRHFQKCIWESNTIEKFDALWKDVIDKAKLIENEWLQGVYEIRSKWVHAYVNHVFS 361
++ F C+ S T E F+ W ++I K +L ENEW+Q ++ R KWV Y + +
Sbjct: 325 DDGFMESFGNCVASSWTDEHFERRWSNMIGKFELNENEWVQLLFRDRKKWVPHYFHGICL 384
Query: 362 AGMSSSNRAESNHAIFRRALSQQ 384
AG+S R+ S + F + ++ +
Sbjct: 385 AGLSGPERSGSIASHFDKYMNSE 407
Score = 237 (88.5 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 70/223 (31%), Positives = 112/223 (50%)
Query: 309 FQKCIWESNTIEKFDALWKDVIDKAKLIENEWLQGVYEIRSKWVHAYVNHVFSAGMSSSN 368
F C+ S T E F+ W ++I K +L ENEW+Q ++ R KWV Y + + AG+S
Sbjct: 332 FGNCVASSWTDEHFERRWSNMIGKFELNENEWVQLLFRDRKKWVPHYFHGICLAGLSGPE 391
Query: 369 RAES--NH--------AIFRRALS------QQRHEELIADNKDL-NERPMLRLPLQIEKK 411
R+ S +H A F+ Q R + D+ + +++P LR L EK+
Sbjct: 392 RSGSIASHFDKYMNSEATFKDFFELYMKFLQYRCDVEAKDDLEYQSKQPTLRSSLAFEKQ 451
Query: 412 MSEIYTCEIFYIFQDELWNSLLHAIELVKENED--CLVYNVVNQEDGVSKVFEVLYDKKL 469
+S IYT F FQ E+ + + +L KE ED ++ + + E+ F L ++ L
Sbjct: 452 LSLIYTDAAFKKFQAEVPGVV--SCQLQKEREDGTTAIFRIEDFEER-QNFFVALNNELL 508
Query: 470 DFVSCICKKFKSEGIPCTHMLALFKKLQISFMPNIYILKRWTK 512
D C C F+ +G C H + + + +S +P+ YILKRW+K
Sbjct: 509 D-ACCSCHLFEYQGFLCKHAILVLQSADVSRVPSQYILKRWSK 550
>TAIR|locus:2035144 [details] [associations]
symbol:FRS6 "FAR1-related sequence 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC008016 InterPro:IPR018289 Pfam:PF10551 EMBL:AY080775
EMBL:AY133776 IPI:IPI00532825 PIR:G96565 RefSeq:NP_175661.1
UniGene:At.37583 PRIDE:Q9SSQ4 EnsemblPlants:AT1G52520.1
GeneID:841683 KEGG:ath:AT1G52520 TAIR:At1g52520 eggNOG:NOG287780
HOGENOM:HOG000112651 InParanoid:Q9SSQ4 OMA:LELMCCK PhylomeDB:Q9SSQ4
ProtClustDB:CLSN2679731 Genevestigator:Q9SSQ4 Uniprot:Q9SSQ4
Length = 703
Score = 341 (125.1 bits), Expect = 5.1e-46, Sum P(3) = 5.1e-46
Identities = 75/246 (30%), Positives = 133/246 (54%)
Query: 163 LYEHFQSEKEKNSSFFYNIKAGCDDRITHCFWADAICRRAYKFYGDVIVFDTTYNTNRYN 222
+Y +F + N +FFY + + ++ + FWADA + + ++GDVI D++Y + ++
Sbjct: 251 IYNYFCRMQLTNPNFFYLMDVNDEGQLRNVFWADAFSKVSCSYFGDVIFIDSSYISGKFE 310
Query: 223 MIFAPFVGVNNHGQTIIFGCGFLSDETTESFLWLFEQFKEAMPGDDPKMIITDQ-DP--A 279
+ F GVN+HG+T + CGFL+ ET ES+ WL + + M P+ I+TD+ P A
Sbjct: 311 IPLVTFTGVNHHGKTTLLSCGFLAGETMESYHWLLKVWLSVMKRS-PQTIVTDRCKPLEA 369
Query: 280 MILHL--------AYWHILNKFLERLSKTVHTENYRH-FQKCIWESNTIEKFDALWKDVI 330
I + + HI+ K E+L + + R F K ++E+ + +F+A W ++
Sbjct: 370 AISQVFPRSHQRFSLTHIMRKIPEKLGGLHNYDAVRKAFTKAVYETLKVVEFEAAWGFMV 429
Query: 331 DKAKLIENEWLQGVYEIRSKWVHAYVNHVFSAGMSSSNRAESNHAIFRRALSQQRHEELI 390
+IENEWL+ +YE R+KW Y+ F AG+++++ E+ F R + +Q +
Sbjct: 430 HNFGVIENEWLRSLYEERAKWAPVYLKDTFFAGIAAAHPGETLKPFFERYVHKQTPLKEF 489
Query: 391 ADNKDL 396
D +L
Sbjct: 490 LDKYEL 495
Score = 153 (58.9 bits), Expect = 5.1e-46, Sum P(3) = 5.1e-46
Identities = 54/212 (25%), Positives = 100/212 (47%)
Query: 377 FRRALSQQRHEELIAD--NKDLNERPMLRLPLQIEKKMSEIYTCEIFYIFQDELWNSLLH 434
+ AL ++ EE ++D ++ LN L+ E ++S IYT ++F FQ E+ +
Sbjct: 493 YELALQKKHREETLSDIESQTLNTAE-LKTKCSFETQLSRIYTRDMFKKFQIEV-EEMYS 550
Query: 435 AIELVKENED--CLVYNVVNQEDGVS-----KVFEVLYDKKLDFVSCICKKFKSEGIPCT 487
+ + D +++ V + G S + FEVLY++ + V CIC F G C
Sbjct: 551 CFSTTQVHVDGPFVIFLVKERVRGESSRREIRDFEVLYNRSVGEVRCICSCFNFYGYLCR 610
Query: 488 HMLALFKKLQISFMPNIYILKRWTKAAKLERVMDRDGVEINDCSNKSILLRRTKLFQFTS 547
H L + + +P YIL RW K K D D +++ +L++ +
Sbjct: 611 HALCVLNFNGVEEIPLRYILPRWRKDYKRLHFADNGLTGFVDGTDRVQWF--DQLYKNSL 668
Query: 548 NVIDKVVLSEVASEIVIENLEDALEKVKLVME 579
V+++ +S ++ ++ L+++L+KV V E
Sbjct: 669 QVVEEGAVSLDHYKVAMQVLQESLDKVHSVEE 700
Score = 106 (42.4 bits), Expect = 5.1e-46, Sum P(3) = 5.1e-46
Identities = 47/199 (23%), Positives = 80/199 (40%)
Query: 4 QNAAGQSNYEDSLYVPEVALNRKPHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSKICK 63
+ G + + L V E P G +F++ DDAY +Y YA E GF +++ +S +
Sbjct: 62 EETMGGFDEQSGLLVDERKEFDAPAVGMEFESYDDAYNYYNCYASEVGFRVRVKNSWFKR 121
Query: 64 ESNDIIRKEYVCFKEGQARQSKVVNXXXXXXXXXXXCSANLVVVKYEFGKYMVRIFVEEH 123
S + C +G R + V N C A + + + + ++ V +H
Sbjct: 122 RSKEKYGAVLCCSSQGFKRINDV-NRVRKETRTG--CPAMIRMRQVDSKRWRVVEVTLDH 178
Query: 124 NHTLSSPRMVHLLRSHRSMSAV---QKSLSQQLAAV-----NI-PTYILYEHFQSEKEKN 174
NH L + R + +S+ K++ A V N+ P L + FQ+
Sbjct: 179 NHLLGCKLYKSVKRKRKCVSSPVSDAKTIKLYRACVVDNGSNVNPNSTLNKKFQNST--G 236
Query: 175 SSFFYNIKAGCDDRITHCF 193
S N+K G I + F
Sbjct: 237 SPDLLNLKRGDSAAIYNYF 255
>TAIR|locus:2090394 [details] [associations]
symbol:FHY3 "far-red elongated hypocotyls 3" species:3702
"Arabidopsis thaliana" [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009585 "red, far-red light phototransduction" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010017 "red or far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042753 "positive regulation of circadian rhythm"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009639 "response to red or far red light"
evidence=RCA] InterPro:IPR001000 InterPro:IPR006564
InterPro:IPR007527 PROSITE:PS50966 SMART:SM00575 INTERPRO:IPR004330
Pfam:PF03101 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0046872 GO:GO:0005975 GO:GO:0007623
GO:GO:0004553 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010218 GO:GO:0009585 GO:GO:0042753 HOGENOM:HOG000090708
InterPro:IPR018289 Pfam:PF10551 EMBL:AP001306 IPI:IPI00519965
RefSeq:NP_001118673.1 RefSeq:NP_188856.2 UniGene:At.27725
STRING:Q9LIE5 PaxDb:Q9LIE5 PRIDE:Q9LIE5 EnsemblPlants:AT3G22170.1
EnsemblPlants:AT3G22170.2 GeneID:821781 KEGG:ath:AT3G22170
TAIR:At3g22170 eggNOG:NOG45392 InParanoid:Q9LIE5 OMA:ITHAERV
PhylomeDB:Q9LIE5 ProtClustDB:PLN03097 Genevestigator:Q9LIE5
Uniprot:Q9LIE5
Length = 839
Score = 396 (144.5 bits), Expect = 1.6e-44, Sum P(2) = 1.6e-44
Identities = 90/260 (34%), Positives = 141/260 (54%)
Query: 141 SMSAVQKSLSQQLAAVNIPT---YILYEHFQSEKEKNSSFFYNIKAGCDDRITHCFWADA 197
S+ + KS ++ +++ T IL + + NS+FFY + G D R+ + FW DA
Sbjct: 213 SLKSDSKSSFEKGRTLSVETGDFKILLDFLSRMQSLNSNFFYAVDLGDDQRVKNVFWVDA 272
Query: 198 ICRRAYKFYGDVIVFDTTYNTNRYNMIFAPFVGVNNHGQTIIFGCGFLSDETTESFLWLF 257
R Y + DV+ DTTY N+Y M A FVGVN H Q ++ GC +SDE+ ++ WL
Sbjct: 273 KSRHNYGSFCDVVSLDTTYVRNKYKMPLAIFVGVNQHYQYMVLGCALISDESAATYSWLM 332
Query: 258 EQFKEAMPGDDPKMIITDQDPAM--IL--------HLAY-WHILNKFLERLSKTVHT-EN 305
E + A+ G PK++IT+ D M I+ H + WH+L K E L + V +N
Sbjct: 333 ETWLRAIGGQAPKVLITELDVVMNSIVPEIFPNTRHCLFLWHVLMKVSENLGQVVKQHDN 392
Query: 306 YR-HFQKCIWESNTIEKFDALWKDVIDKAKLIENEWLQGVYEIRSKWVHAYVNHVFSAGM 364
+ F+KCI++S E F W + + L +++W+ +YE R KW Y+ V AGM
Sbjct: 393 FMPKFEKCIYKSGKDEDFARKWYKNLARFGLKDDQWMISLYEDRKKWAPTYMTDVLLAGM 452
Query: 365 SSSNRAESNHAIFRRALSQQ 384
S+S RA+S +A F + + ++
Sbjct: 453 STSQRADSINAFFDKYMHKK 472
Score = 301 (111.0 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 90/294 (30%), Positives = 149/294 (50%)
Query: 309 FQKCIWESNTIEKFDALWKDVIDKAKLIENEWLQGVYEIRSKWVHAYVNHVFSAGMSSSN 368
F+KCI++S E F W + + L +++W+ +YE R KW Y+ V AGMS+S
Sbjct: 397 FEKCIYKSGKDEDFARKWYKNLARFGLKDDQWMISLYEDRKKWAPTYMTDVLLAGMSTSQ 456
Query: 369 RAESNHAIFRRALS----------------QQR-HEELIADNKDLNERPMLRLPLQIEKK 411
RA+S +A F + + Q R EE AD++ N++P ++ P EK
Sbjct: 457 RADSINAFFDKYMHKKTSVQEFVKVYDTVLQDRCEEEAKADSEMWNKQPAMKSPSPFEKS 516
Query: 412 MSEIYTCEIFYIFQDELWNSLLHAIELVKENED--CLVYNVVNQEDGVSKVFEVLYDKKL 469
+SE+YT +F FQ E+ ++ A +EN D C + V + E+ ++ F V +++
Sbjct: 517 VSEVYTPAVFKKFQIEVLGAI--ACSPREENRDATCSTFRVQDFEN--NQDFMVTWNQTK 572
Query: 470 DFVSCICKKFKSEGIPCTHMLALFKKLQISFMPNIYILKRWTKAAKLERVMDRDGVEIND 529
VSCIC+ F+ +G C H L + + +S +P+ YILKRWTK AK R + ++
Sbjct: 573 AEVSCICRLFEYKGYLCRHTLNVLQCCHLSSIPSQYILKRWTKDAK-SRHFSGEPQQL-- 629
Query: 530 CSNKSILLRRTKLFQFTSNVIDKVVLSEVASEIVIENLEDALEKVKLVMESCRS 583
++ LLR L + + ++ LS+ + I +E A+ + S RS
Sbjct: 630 ---QTRLLRYNDLCERALKLNEEASLSQESYNIAFLAIEGAIGNCAGINTSGRS 680
Score = 147 (56.8 bits), Expect = 1.6e-44, Sum P(2) = 1.6e-44
Identities = 41/172 (23%), Positives = 80/172 (46%)
Query: 1 MNAQNAAGQSNYEDSLYVPEVALNRKPHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSK 60
+N ++ G L +N +P G +F++ +AY FY++Y++ GF+ I +S+
Sbjct: 44 VNTDDSVGMGVPTGELVEYTEGMNLEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSR 103
Query: 61 ICKESNDIIRKEYVCFKEG------------QARQSKV--VNXXXXXXXXXXXCSANLVV 106
K + + I ++ C + G +ARQSK N C A++ V
Sbjct: 104 RSKTTREFIDAKFACSRYGTKREYDKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHV 163
Query: 107 VKYEFGKYMVRIFVEEHNHTLSSPRMVHLLRSHRSMSAVQKSLSQQLAAVNI 158
+ GK+++ FV EHNH L + V ++ + +A+ K ++ +++
Sbjct: 164 KRRPDGKWVIHSFVREHNHELLPAQAVSE-QTRKIYAAMAKQFAEYKTVISL 214
>TAIR|locus:2016259 [details] [associations]
symbol:FRS8 "FAR1-related sequence 8" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0050665
"hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009322 EMBL:AC011717 InterPro:IPR018289 Pfam:PF10551
HOGENOM:HOG000112651 IPI:IPI00534750 PIR:E96831 RefSeq:NP_178118.2
UniGene:At.52575 PRIDE:Q9S793 EnsemblPlants:AT1G80010.1
GeneID:844341 KEGG:ath:AT1G80010 TAIR:At1g80010 eggNOG:NOG311954
InParanoid:Q9S793 OMA:FAIRVKS Genevestigator:Q9S793 Uniprot:Q9S793
Length = 725
Score = 298 (110.0 bits), Expect = 1.5e-43, Sum P(3) = 1.5e-43
Identities = 62/213 (29%), Positives = 113/213 (53%)
Query: 163 LYEHFQSEKEKNSSFFYNIKAGCDDRITHCFWADAICRRAYKFYGDVIVFDTTYNTNRYN 222
L + F + + +F Y + D + + FW DA R AY +GDV++FDTT +N Y
Sbjct: 275 LQDFFFQIQLSSPNFLYLMDLADDGSLRNVFWIDARARAAYSHFGDVLLFDTTCLSNAYE 334
Query: 223 MIFAPFVGVNNHGQTIIFGCGFLSDETTESFLWLFEQFKEAMPGDDPKMIITDQDPAMIL 282
+ FVG+N+HG TI+ GCG L+D++ E+++WLF + M G P++ IT+Q AM
Sbjct: 335 LPLVAFVGINHHGDTILLGCGLLADQSFETYVWLFRAWLTCMLGRPPQIFITEQCKAMRT 394
Query: 283 ---------H--LAYWHILNKFLERLSKTVHTENY-RHFQKCIWESNTIEKFDALWKDVI 330
H L+ H+L+ + + + ++ + + ++ +E+F+ W+++I
Sbjct: 395 AVSEVFPRAHHRLSLTHVLHNICQSVVQLQDSDLFPMALNRVVYGCLKVEEFETAWEEMI 454
Query: 331 DKAKLIENEWLQGVYEIRSKWVHAYVNHVFSAG 363
+ + NE ++ +++ R W Y+ F AG
Sbjct: 455 IRFGMTNNETIRDMFQDRELWAPVYLKDTFLAG 487
Score = 158 (60.7 bits), Expect = 1.5e-43, Sum P(3) = 1.5e-43
Identities = 53/203 (26%), Positives = 85/203 (41%)
Query: 381 LSQQRHEELIADNKDLNERPMLRLPLQIEKKMSEIYTCEIFYIFQDELWN-SLLHAIELV 439
L ++ E + D++ L P L+ E +M++++T EIF FQDE+ S + V
Sbjct: 523 LDKKYTREALCDSESLKLIPKLKTTHPYESQMAKVFTMEIFRRFQDEVSAMSSCFGVTQV 582
Query: 440 KENEDCLVYNVVNQEDGVSKVFEVLYDKKLDF---VSCICKKFKSEGIPCTHMLALFKKL 496
N Y V +E + FEV+Y+ C+C F G C H+L L
Sbjct: 583 HSNGSASSYVVKEREGDKVRDFEVIYETSAAAQVRCFCVCGGFSFNGYQCRHVLLLLSHN 642
Query: 497 QISFMPNIYILKRWTKAAKLERVMDRDGVEINDCSNKSILLRRTKLFQFTSNVIDKVVLS 556
+ +P YIL+RW K K V + + D N L + V+++ + S
Sbjct: 643 GLQEVPPQYILQRWRKDVKRLYVAEFGSGRV-DIMNPDQWYEH--LHRRAMQVVEQGMRS 699
Query: 557 EVASEIVIENLEDALEKVKLVME 579
+ E + KV+ V E
Sbjct: 700 KEHCRAAWEAFRECANKVQFVTE 722
Score = 127 (49.8 bits), Expect = 1.5e-43, Sum P(3) = 1.5e-43
Identities = 36/143 (25%), Positives = 64/143 (44%)
Query: 3 AQNAAGQSNYEDSLYVPEVALNRKPHK-GKKFDTLDDAYEFYKKYAKEGGFSIQINSSKI 61
A N ++ +++ + E L P G +F++ DDAY FY YA+E GF+I++ SS
Sbjct: 70 APNHEEETGCDENAFANEKCLMAPPPTPGMEFESYDDAYSFYNSYARELGFAIRVKSSWT 129
Query: 62 CKESNDIIRKEYVCFKEGQARQSKVVNXXXXXXXXXXXCSANLVVVKYEFGKYMVRIFVE 121
+ S + C +G + + C A + + F ++ V
Sbjct: 130 KRNSKEKRGAVLCCNCQGF---KLLKDAHSRRKETRTGCQAMIRLRLIHFDRWKVDQVKL 186
Query: 122 EHNHTLSSPRMVHLLRSHRSMSA 144
+HNH+ P+ H +SH+ S+
Sbjct: 187 DHNHSFD-PQRAHNSKSHKKSSS 208
>TAIR|locus:2014639 [details] [associations]
symbol:FRS4 "FAR1-related sequence 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009978 EMBL:AC012394 HOGENOM:HOG000090708 InterPro:IPR018289
Pfam:PF10551 EMBL:BT010456 EMBL:AK221406 IPI:IPI00535818
IPI:IPI00657192 PIR:G96790 RefSeq:NP_001031286.1 RefSeq:NP_177759.1
UniGene:At.34672 PaxDb:Q6NQJ7 PRIDE:Q6NQJ7 GeneID:843965
KEGG:ath:AT1G76320 TAIR:At1g76320 eggNOG:NOG261993
InParanoid:Q9SGQ3 OMA:KIGCKAS ProtClustDB:CLSN2682748
Genevestigator:Q6NQJ7 Uniprot:Q6NQJ7
Length = 732
Score = 348 (127.6 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 75/231 (32%), Positives = 128/231 (55%)
Query: 162 ILYEHFQSEKEKNSSFFYNIKAGCDDRITHCFWADAICRRAYKFYGDVIVFDTTYNTNRY 221
IL E +E+N FF+ + D + + FW DA YK + DV+ F+T+Y ++Y
Sbjct: 165 ILLEFLMRMQEENPKFFFAVDFSEDHLLRNVFWVDAKGIEDYKSFSDVVSFETSYFVSKY 224
Query: 222 NMIFAPFVGVNNHGQTIIFGCGFLSDETTESFLWLFEQFKEAMPGDDPKMIITDQDPAMI 281
+ FVGVN+H Q ++ GCG L+D+T +++WL + + AM G PK+++TDQ+ A+
Sbjct: 225 KVPLVLFVGVNHHVQPVLLGCGLLADDTVYTYVWLMQSWLVAMGGQKPKVMLTDQNNAIK 284
Query: 282 LHLA---------Y--WHILNKFLERLSK-TVHTENY-RHFQKCIWESNTIEKFDALWKD 328
+A Y WH+L++ L ++ + + + KCI+ S + E+FD W
Sbjct: 285 AAIAAVLPETRHCYCLWHVLDQLPRNLDYWSMWQDTFMKKLFKCIYRSWSEEEFDRRWLK 344
Query: 329 VIDKAKLIENEWLQGVYEIRSKWVHAYVNHVFSAGMSSSNRAESNHAIFRR 379
+IDK L + W++ +YE R W ++ + AG+S R+ES +++F R
Sbjct: 345 LIDKFHLRDVPWMRSLYEERKFWAPTFMRGITFAGLSMRCRSESVNSLFDR 395
Score = 268 (99.4 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 73/256 (28%), Positives = 128/256 (50%)
Query: 287 WHILNKFLERLSK-TVHTENY-RHFQKCIWESNTIEKFDALWKDVIDKAKLIENEWLQGV 344
WH+L++ L ++ + + + KCI+ S + E+FD W +IDK L + W++ +
Sbjct: 301 WHVLDQLPRNLDYWSMWQDTFMKKLFKCIYRSWSEEEFDRRWLKLIDKFHLRDVPWMRSL 360
Query: 345 YEIRSKWVHAYVNHVFSAGMSSSNRAESNHAIFRR-----------------ALSQQRHE 387
YE R W ++ + AG+S R+ES +++F R L + E
Sbjct: 361 YEERKFWAPTFMRGITFAGLSMRCRSESVNSLFDRYVHPETSLKEFLEGYGLMLEDRYEE 420
Query: 388 ELIADNKDLNERPMLRLPLQIEKKMSEIYTCEIFYIFQDELWNSLLHAIELVKENEDCLV 447
E AD +E P L+ P EK+M +Y+ EIF FQ E+ + A L KE+E+
Sbjct: 421 EAKADFDAWHEAPELKSPSPFEKQMLLVYSHEIFRRFQLEVLGAA--ACHLTKESEEGTT 478
Query: 448 YNVVNQEDGVSKVFEVLYDKKLDFVSCICKKFKSEGIPCTHMLALFKKLQISFMPNIYIL 507
Y+V + +D + + V +D+ + C C+ F+ +G C H + + + + +P Y+L
Sbjct: 479 YSVKDFDD--EQKYLVDWDEFKSDIYCSCRSFEYKGYLCRHAIVVLQMSGVFTIPINYVL 536
Query: 508 KRWTKAAKLERVMDRD 523
+RWT AA+ + R+
Sbjct: 537 QRWTNAARNRHQISRN 552
Score = 179 (68.1 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 44/128 (34%), Positives = 64/128 (50%)
Query: 32 KFDTLDDAYEFYKKYAKEGGFSIQINSSKICKESNDIIRKEYVCFKEGQARQSKVVNXXX 91
+F+T +DAY FYK YAK GF SS+ + S + I ++ C + G +QS +
Sbjct: 2 EFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSD--DAIN 59
Query: 92 XXXXXXXXCSANLVVVKYEFGKYMVRIFVEEHNHTLSSPRMVHLLRSHRSMSAVQKSLSQ 151
C A++ V + GK+ V FV+EHNH L P H RSHR+ V+ + S+
Sbjct: 60 PRASPKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLL-PEQAHYFRSHRNTELVKSNDSR 118
Query: 152 QLAAVNIP 159
N P
Sbjct: 119 LRRKKNTP 126
>TAIR|locus:2082420 [details] [associations]
symbol:FRS7 "FAR1-related sequence 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC018907
InterPro:IPR018289 Pfam:PF10551 eggNOG:NOG292373
HOGENOM:HOG000112649 ProtClustDB:CLSN2686747 EMBL:AF360270
EMBL:AY150446 IPI:IPI00534625 RefSeq:NP_566278.1 UniGene:At.19021
UniGene:At.74222 PRIDE:Q9M8J3 EnsemblPlants:AT3G06250.1
GeneID:819799 KEGG:ath:AT3G06250 TAIR:At3g06250 InParanoid:Q9M8J3
OMA:RCGNEIE PhylomeDB:Q9M8J3 Genevestigator:Q9M8J3 Uniprot:Q9M8J3
Length = 764
Score = 436 (158.5 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 107/365 (29%), Positives = 187/365 (51%)
Query: 26 KPHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSKICKESNDIIRKEYVCFKEGQARQSK 85
+P+ G +F++ ++A +FY+ YA+ GF ++I K I + +VC KEG S+
Sbjct: 189 EPYAGLEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQHPSR 248
Query: 86 VVNXXXXXXXXXXXCSANLVVVKYEFGKYMVRIFVEEHNHTLSSPRMVHLLRSHR----- 140
+ C A + + + + G ++V ++HNH L + ++
Sbjct: 249 M------------GCGAYMRIKRQDSGGWIVDRLNKDHNHDLEPGKKNAGMKKITDDVTG 296
Query: 141 ---SMSAVQ-KSLSQQLAAVNIPT-----Y-ILYEHFQSEKEKNSSFFYNIKAGCDDRIT 190
S+ ++ LS +++ T Y +L ++FQS++ ++ FFY I+ +
Sbjct: 297 GLDSVDLIELNDLSNHISSTRENTIGKEWYPVLLDYFQSKQAEDMGFFYAIELDSNGSCM 356
Query: 191 HCFWADAICRRAYKFYGDVIVFDTTYNTNRYNMIFAPFVGVNNHGQTIIFGCGFLSDETT 250
FWAD+ R A +GD +VFDT+Y Y++ FA F+G N+H Q ++ G ++DE+
Sbjct: 357 SIFWADSRSRFACSQFGDAVVFDTSYRKGDYSVPFATFIGFNHHRQPVLLGGALVADESK 416
Query: 251 ESFLWLFEQFKEAMPGDDPKMIITDQD-P-----AMIL---HLAY--WHILNKFLERLSK 299
E+F WLF+ + AM G P+ ++ DQD P A + H + W I +K E L
Sbjct: 417 EAFSWLFQTWLRAMSGRRPRSMVADQDLPIQQAVAQVFPGTHHRFSAWQIRSKERENLRS 476
Query: 300 TVHTENYRHFQKCIWESNTIEKFDALWKDVIDKAKLIENEWLQGVYEIRSKWVHAYVNHV 359
+ Y ++KC+++S T +FD +W +++K L +N WL+ +YE R KWV AY+
Sbjct: 477 FPNEFKYE-YEKCLYQSQTTVEFDTMWSSLVNKYGLRDNMWLREIYEKREKWVPAYLRAS 535
Query: 360 FSAGM 364
F G+
Sbjct: 536 FFGGI 540
Score = 313 (115.2 bits), Expect = 2.6e-31, Sum P(3) = 2.6e-31
Identities = 91/294 (30%), Positives = 140/294 (47%)
Query: 287 WHILNKFLERLSKTVHTENYRHFQKCIWESNTIEKFDALWKDVIDKAKLIENEWLQGVYE 346
W I +K E L + Y ++KC+++S T +FD +W +++K L +N WL+ +YE
Sbjct: 464 WQIRSKERENLRSFPNEFKYE-YEKCLYQSQTTVEFDTMWSSLVNKYGLRDNMWLREIYE 522
Query: 347 IRSKWVHAYVNHVFSAGM-----------SSSNRAESNHAIFRR---ALSQQRHEELIAD 392
R KWV AY+ F G+ +S N S R L Q+R EE D
Sbjct: 523 KREKWVPAYLRASFFGGIHVDGTFDPFYGTSLNSLTSLREFISRYEQGLEQRREEERKED 582
Query: 393 NKDLNERPMLRLPLQIEKKMSEIYTCEIFYIFQDELWNSLLHAIELVKENEDCLVYNVVN 452
N +P L+ +E++ +YT IF IFQ EL S + + L E + +V
Sbjct: 583 FNSYNLQPFLQTKEPVEEQCRRLYTLTIFRIFQSELAQSYNY-LGLKTYEEGAISRFLVR 641
Query: 453 QEDGVSKVFEVLYDKKLDFVSCICKKFKSEGIPCTHMLALFKKLQISFMPNIYILKRWTK 512
+ ++ V + SC C+ F+ EG+ C H+L +F L I +P+ YIL RWTK
Sbjct: 642 KCGNENEKHAVTFSASNLNASCSCQMFEYEGLLCRHILKVFNLLDIRELPSRYILHRWTK 701
Query: 513 AAKLERVMD-RDGVEINDCSNKSIL-LRR--TKLFQFTSNVIDKVVLS-EVASE 561
A+ V D GV D I LR +K +F ++ ++K L+ E+ E
Sbjct: 702 NAEFGFVRDVESGVTSQDLKALMIWSLREAASKYIEFGTSSLEKYKLAYEIMRE 755
Score = 111 (44.1 bits), Expect = 2.6e-31, Sum P(3) = 2.6e-31
Identities = 27/102 (26%), Positives = 48/102 (47%)
Query: 26 KPHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSKICKESNDIIRKEYVCFKEGQARQSK 85
+P+ G +FDT ++A ++Y YA GF ++ + + + +VC KEG S+
Sbjct: 27 EPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLNSR 86
Query: 86 VVNXXXXXXXXXXXCSANLVVVKYEFGKYMVRIFVEEHNHTL 127
C A + V + + GK+++ +EHNH L
Sbjct: 87 T------------GCPAFIRVQRRDTGKWVLDQIQKEHNHDL 116
Score = 41 (19.5 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 555 LSEVASEIVIENLEDALEKVKLVMESCRSEG 585
L E AS+ IE +LEK KL E R G
Sbjct: 728 LREAASKY-IEFGTSSLEKYKLAYEIMREGG 757
>TAIR|locus:2129665 [details] [associations]
symbol:FAR1 "FAR-RED IMPAIRED RESPONSE 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=IMP] [GO:0010017 "red or far-red
light signaling pathway" evidence=IMP] [GO:0010018 "far-red light
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0010218 "response
to far red light" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA;IDA] [GO:0042753
"positive regulation of circadian rhythm" evidence=IMP] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010212
"response to ionizing radiation" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0048522
"positive regulation of cellular process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 EMBL:AL161540 EMBL:Z97337 GO:GO:0010018
GO:GO:0042753 PIR:F71414 PIR:T02124 EMBL:AF159587 IPI:IPI00546816
RefSeq:NP_567455.4 UniGene:At.11570 IntAct:Q9SWG3 STRING:Q9SWG3
PaxDb:Q9SWG3 PRIDE:Q9SWG3 EnsemblPlants:AT4G15090.1 GeneID:827173
KEGG:ath:AT4G15090 TAIR:At4g15090 eggNOG:NOG306101
HOGENOM:HOG000090708 InParanoid:Q9SWG3 OMA:LNLMEPP PhylomeDB:Q9SWG3
ProtClustDB:CLSN2716659 Genevestigator:Q9SWG3 InterPro:IPR018289
Pfam:PF10551 Uniprot:Q9SWG3
Length = 827
Score = 419 (152.6 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 99/281 (35%), Positives = 156/281 (55%)
Query: 117 RIFVEEHNHTLSSPRMVHLLRSHRSMSAVQKSLSQQLAAVNIPTYILYEHFQSEKEKNSS 176
+++VE + + LL++ S S V K + LA + +L E+F+ K++N
Sbjct: 186 KMYVEMSRQSGGYKNIGSLLQTDVS-SQVDKG--RYLALEEGDSQVLLEYFKRIKKENPK 242
Query: 177 FFYNIKAGCDDRITHCFWADAICRRAYKFYGDVIVFDTTYNTNRYNMIFAPFVGVNNHGQ 236
FFY I D R+ + FWADA R Y + DV+ FDTTY + A F+GVN+H Q
Sbjct: 243 FFYAIDLNEDQRLRNLFWADAKSRDDYLSFNDVVSFDTTYVKFNDKLPLALFIGVNHHSQ 302
Query: 237 TIIFGCGFLSDETTESFLWLFEQFKEAMPGDDPKMIITDQDPAMIL----------H-LA 285
++ GC ++DE+ E+F+WL + + AM G PK+I+TDQD ++ H A
Sbjct: 303 PMLLGCALVADESMETFVWLIKTWLRAMGGRAPKVILTDQDKFLMSAVSELLPNTRHCFA 362
Query: 286 YWHILNKFLERLSKTVHT-ENYR-HFQKCIWESNTIEKFDALWKDVIDKAKLIENEWLQG 343
WH+L K E S + EN+ F KCI+ S T ++FD W ++ + L +EWL
Sbjct: 363 LWHVLEKIPEYFSHVMKRHENFLLKFNKCIFRSWTDDEFDMRWWKMVSQFGLENDEWLLW 422
Query: 344 VYEIRSKWVHAYVNHVFSAGMSSSNRAESNHAIFRRALSQQ 384
++E R KWV +++ VF AGMS+S R+ES ++ F + + ++
Sbjct: 423 LHEHRQKWVPTFMSDVFLAGMSTSQRSESVNSFFDKYIHKK 463
Score = 299 (110.3 bits), Expect = 4.2e-37, Sum P(2) = 4.2e-37
Identities = 93/321 (28%), Positives = 155/321 (48%)
Query: 304 ENYR-HFQKCIWESNTIEKFDALWKDVIDKAKLIENEWLQGVYEIRSKWVHAYVNHVFSA 362
EN+ F KCI+ S T ++FD W ++ + L +EWL ++E R KWV +++ VF A
Sbjct: 382 ENFLLKFNKCIFRSWTDDEFDMRWWKMVSQFGLENDEWLLWLHEHRQKWVPTFMSDVFLA 441
Query: 363 GMSSSNRAESNHAIFRR----------------ALSQQRHEE-LIADNKDLNERPMLRLP 405
GMS+S R+ES ++ F + + Q R+EE +AD +++P L+ P
Sbjct: 442 GMSTSQRSESVNSFFDKYIHKKITLKEFLRQYGVILQNRYEEESVADFDTCHKQPALKSP 501
Query: 406 LQIEKKMSEIYTCEIFYIFQDELWNSLLHAIELVKENEDCLVYNVVNQEDGVSKVFEVLY 465
EK+M+ YT IF FQ E+ + KE+E+ + V + E F V +
Sbjct: 502 SPWEKQMATTYTHTIFKKFQVEVLGVVACHPRKEKEDENMATFRVQDCEKDDD--FLVTW 559
Query: 466 DKKLDFVSCICKKFKSEGIPCTHMLALFKKLQISFMPNIYILKRWTKAAKLERVMDRDGV 525
K + C C+ F+ +G C H L + + + +P YILKRWTK AK V+ +G
Sbjct: 560 SKTKSELCCFCRMFEYKGFLCRHALMILQMCGFASIPPQYILKRWTKDAK-SGVLAGEGA 618
Query: 526 EINDCSNKSILLRRTKLFQFTSNVIDKVVLSEVASEIVIENLEDALEKVKLVMESCRSEG 585
+ ++ + R L + + ++ +SE I + L + L+ + M + R+
Sbjct: 619 D----QIQTRVQRYNDLCSRATELSEEGCVSEENYNIALRTLVETLKNC-VDMNNARNN- 672
Query: 586 VLEKNSGMQQPHFNEPLQIRA 606
+ E NS + E Q+ A
Sbjct: 673 ITESNSQLNNGTHEEENQVMA 693
Score = 182 (69.1 bits), Expect = 4.2e-37, Sum P(2) = 4.2e-37
Identities = 47/155 (30%), Positives = 78/155 (50%)
Query: 23 LNRKPHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSKICKESNDIIRKEYVCFKEGQAR 82
L+ +P G FDT + AY FY++YAK GF+ I +S+ K++ D I ++ C + G
Sbjct: 47 LDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTP 106
Query: 83 QSKVVNXXXXXXXXXXX-CSANLVVVKYEFGKYMVRIFVEEHNHTLSSPRMVHLLRSHRS 141
+S+ C A++ V + GK+++ FV++HNH L P + + R R+
Sbjct: 107 ESESSGSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL-PALAYHFRIQRN 165
Query: 142 MSAVQKSLSQQLAAVNIPTYILYEHF--QSEKEKN 174
+ +K+ L AV+ T +Y QS KN
Sbjct: 166 VKLAEKNNIDILHAVSERTKKMYVEMSRQSGGYKN 200
>TAIR|locus:2059304 [details] [associations]
symbol:FRS3 "FAR1-related sequence 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 EMBL:AC005623 InterPro:IPR018289 Pfam:PF10551
EMBL:AY057491 EMBL:BT002690 IPI:IPI00526037 IPI:IPI00657216
PIR:H84668 RefSeq:NP_001031428.1 RefSeq:NP_565636.1
RefSeq:NP_850098.1 UniGene:At.22269 IntAct:Q9ZVC9 PaxDb:Q9ZVC9
PRIDE:Q9ZVC9 EnsemblPlants:AT2G27110.1 EnsemblPlants:AT2G27110.2
GeneID:817253 KEGG:ath:AT2G27110 TAIR:At2g27110 eggNOG:NOG302035
HOGENOM:HOG000241939 InParanoid:Q9ZVC9 OMA:LWPRQDE PhylomeDB:Q9ZVC9
ProtClustDB:CLSN2688464 Genevestigator:Q9ZVC9 Uniprot:Q9ZVC9
Length = 851
Score = 411 (149.7 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 113/393 (28%), Positives = 189/393 (48%)
Query: 5 NAAGQSNYEDSLYVPEVALNRKPHKGKKFDTLDDAYEFYKKYAKEGGFSIQI----NSSK 60
+ +GQ+N ++SL V + +P G +F++ +A FY +Y+++ GF+ ++ + S
Sbjct: 27 DCSGQNNMDNSLGVQDEIGIAEPCVGMEFNSEKEAKSFYDEYSRQLGFTSKLLPRTDGSV 86
Query: 61 -----ICKESNDIIRKEYV--CFK----EGQARQSKVVNXXXXXXXXXXXCSANLVVVKY 109
+C S+ ++ C E Q + VV S L ++
Sbjct: 87 SVREFVCSSSSKRSKRRLSESCDAMVRIELQGHEKWVVTKFVKEHTHGLASSNMLHCLRP 146
Query: 110 EFGKYMVRIFVEEHNHTLSSPR-MVHLLRSHRSMSAVQKSLSQQLA-AVNIPTYILYEHF 167
++ + ++ P M+++ S A S++ + + L E+F
Sbjct: 147 R--RHFANSEKSSYQEGVNVPSGMMYVSMDANSRGARNASMATNTKRTIGRDAHNLLEYF 204
Query: 168 QSEKEKNSSFFYNIKAGCDDRITHCFWADAICRRAYKFYGDVIVFDTTYNTNRYNMIFAP 227
+ + +N FFY ++ D+++++ FWAD+ R AY +GD + DT Y N++ + FAP
Sbjct: 205 KRMQAENPGFFYAVQLDEDNQMSNVFWADSRSRVAYTHFGDTVTLDTRYRCNQFRVPFAP 264
Query: 228 FVGVNNHGQTIIFGCGFLSDETTESFLWLFEQFKEAMPGDDPKMIITDQDPAMILHLAYW 287
F GVN+HGQ I+FGC + DE+ SF+WLF+ F AM P ++TDQD A+ +
Sbjct: 265 FTGVNHHGQAILFGCALILDESDTSFIWLFKTFLTAMRDQPPVSLVTDQDRAIQIAAGQV 324
Query: 288 -----HILNKF---LERLSKTVHT-ENYRHFQ----KCIWESNTIEKFDALWKDVIDKAK 334
H +NK+ E K H Y FQ CI + TIE+F++ W VIDK
Sbjct: 325 FPGARHCINKWDVLREGQEKLAHVCLAYPSFQVELYNCINFTETIEEFESSWSSVIDKYD 384
Query: 335 LIENEWLQGVYEIRSKWVHAYVNHVFSAGMSSS 367
L +EWL +Y R++WV Y F A + S
Sbjct: 385 LGRHEWLNSLYNARAQWVPVYFRDSFFAAVFPS 417
Score = 292 (107.8 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 84/308 (27%), Positives = 144/308 (46%)
Query: 287 WHILNKFLERLSKT--VHTENYRHFQKCIWESNTIEKFDALWKDVIDKAKLIENEWLQGV 344
W +L + E+L+ + CI + TIE+F++ W VIDK L +EWL +
Sbjct: 335 WDVLREGQEKLAHVCLAYPSFQVELYNCINFTETIEEFESSWSSVIDKYDLGRHEWLNSL 394
Query: 345 YEIRSKWVHAYVNHVF------SAGMSSS------NRAESNHAIFR---RALSQQRHEEL 389
Y R++WV Y F S G S S N+ + FR RA+ E+
Sbjct: 395 YNARAQWVPVYFRDSFFAAVFPSQGYSGSFFDGYVNQQTTLPMFFRLYERAMESWFEMEI 454
Query: 390 IADNKDLNERPMLRLPLQIEKKMSEIYTCEIFYIFQDELWNSLLHAIELVKENEDCLVYN 449
AD +N P+L+ P +E + + ++T +IF FQ+EL + H ++++ +
Sbjct: 455 EADLDTVNTPPVLKTPSPMENQAANLFTRKIFGKFQEELVETFAHTANRIEDDGTTSTFR 514
Query: 450 VVNQEDGVSKVFEVLYDKKLDFVSCICKKFKSEGIPCTHMLALFKKLQISFMPNIYILKR 509
V N E+ +K + V + +C C+ F+ GI C H+L +F I +P YIL+R
Sbjct: 515 VANFEND-NKAYIVTFCYPEMRANCSCQMFEHSGILCRHVLTVFTVTNILTLPPHYILRR 573
Query: 510 WTKAAKLERVMDRDGVEINDCSNKSILLRRTKLFQFTSNVIDKVVLSEVASEIVIENLED 569
WT+ AK +D +++ + S + R L + ++ ++ A I + L +
Sbjct: 574 WTRNAKSMVELDE---HVSENGHDSSIHRYNHLCREAIKYAEEGAITAEAYNIALGQLRE 630
Query: 570 ALEKVKLV 577
+KV +V
Sbjct: 631 GGKKVSVV 638
>TAIR|locus:2144930 [details] [associations]
symbol:FRS12 "FAR1-related sequence 12" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC068655
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00546450 RefSeq:NP_197397.1
UniGene:At.22319 UniGene:At.72702 PaxDb:Q3E7I5 PRIDE:Q3E7I5
EnsemblPlants:AT5G18960.1 GeneID:832014 KEGG:ath:AT5G18960
TAIR:At5g18960 eggNOG:NOG292373 HOGENOM:HOG000112649
InParanoid:Q3E7I5 OMA:GSANEAC PhylomeDB:Q3E7I5
ProtClustDB:CLSN2686747 Genevestigator:Q3E7I5 Uniprot:Q3E7I5
Length = 788
Score = 409 (149.0 bits), Expect = 4.1e-35, Sum P(2) = 4.1e-35
Identities = 105/376 (27%), Positives = 190/376 (50%)
Query: 26 KPHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSKICKESNDIIRKEYVCFKEGQARQSK 85
+P+ G +F + ++A +FY+ YA+ GF ++I K I + +VC +EG S+
Sbjct: 210 EPYAGLEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGFQHPSR 269
Query: 86 VVNXXXXXXXXXXXCSANLVVVKYEFGKYMVRIFVEEHNHTLSSPRM------------- 132
+ C A + + + + G ++V ++HNH L +
Sbjct: 270 M------------GCGAYMRIKRQDSGGWIVDRLNKDHNHDLEPGKKNDAGMKKIPDDGT 317
Query: 133 -----VHLLRSHR-SMSAVQKSLSQQLAAVNIPTYILYEHFQSEKEKNSSFFYNIKAGCD 186
V L+ + + ++K+ ++ P +L ++FQS + ++ FFY ++ +
Sbjct: 318 GGLDSVDLIELNDFGNNHIKKTRENRIGKEWYP--LLLDYFQSRQTEDMGFFYAVELDVN 375
Query: 187 D-RITHCFWADAICRRAYKFYGDVIVFDTTYNTNRYNMIFAPFVGVNNHGQTIIFGCGFL 245
+ FWAD+ R A +GD +VFDT+Y Y++ FA +G N+H Q ++ GC +
Sbjct: 376 NGSCMSIFWADSRARFACSQFGDSVVFDTSYRKGSYSVPFATIIGFNHHRQPVLLGCAMV 435
Query: 246 SDETTESFLWLFEQFKEAMPGDDPKMIITDQD-P---AMI-----LHLAYWHILNKFLER 296
+DE+ E+FLWLF+ + AM G P+ I+ DQD P A++ H Y + ER
Sbjct: 436 ADESKEAFLWLFQTWLRAMSGRRPRSIVADQDLPIQQALVQVFPGAHHRYSAWQIREKER 495
Query: 297 LSKTVHTENYRH-FQKCIWESNTIEKFDALWKDVIDKAKLIENEWLQGVYEIRSKWVHAY 355
+ +++ ++KCI+++ TI +FD++W +I+K L ++ WL+ +YE R WV AY
Sbjct: 496 ENLIPFPSEFKYEYEKCIYQTQTIVEFDSVWSALINKYGLRDDVWLREIYEQRENWVPAY 555
Query: 356 VNHVFSAGMSSSNRAE 371
+ F AG+ + E
Sbjct: 556 LRASFFAGIPINGTIE 571
Score = 312 (114.9 bits), Expect = 7.8e-32, Sum P(3) = 7.8e-32
Identities = 91/294 (30%), Positives = 144/294 (48%)
Query: 287 WHILNKFLERLSKTVHTENYRHFQKCIWESNTIEKFDALWKDVIDKAKLIENEWLQGVYE 346
W I K E L Y ++KCI+++ TI +FD++W +I+K L ++ WL+ +YE
Sbjct: 488 WQIREKERENLIPFPSEFKYE-YEKCIYQTQTIVEFDSVWSALINKYGLRDDVWLREIYE 546
Query: 347 IRSKWVHAYVNHVFSAGMSSSNRAE-----SNHAI---------FRRALSQQRHEELIAD 392
R WV AY+ F AG+ + E S A+ + +AL Q+R EE D
Sbjct: 547 QRENWVPAYLRASFFAGIPINGTIEPFFGASLDALTPLREFISRYEQALEQRREEERKED 606
Query: 393 NKDLNERPMLRLPLQIEKKMSEIYTCEIFYIFQDELWNSLLHAIELVKENEDCLVYNVVN 452
N +P L+ +E++ +YT +F IFQ+EL S + L E + +V
Sbjct: 607 FNSYNLQPFLQTKEPVEEQCRRLYTLTVFRIFQNELVQSYNYLC-LKTYEEGAISRFLVR 665
Query: 453 QEDGVSKVFEVLYDKKLDFVSCICKKFKSEGIPCTHMLALFKKLQISFMPNIYILKRWTK 512
+ S+ V + SC C+ F+ EG+ C H+L +F L I +P+ YIL RWTK
Sbjct: 666 KCGNESEKHAVTFSASNLNSSCSCQMFEHEGLLCRHILKVFNLLDIRELPSRYILHRWTK 725
Query: 513 AAKLERVMDRD-GVEINDCSNKSIL-LRR--TKLFQFTSNVIDKVVLS-EVASE 561
A+ V D + GV D + LR +K +F ++ ++K L+ E+ E
Sbjct: 726 NAEFGFVRDMESGVSAQDLKALMVWSLREAASKYIEFGTSSLEKYKLAYEIMRE 779
Score = 118 (46.6 bits), Expect = 7.8e-32, Sum P(3) = 7.8e-32
Identities = 29/102 (28%), Positives = 49/102 (48%)
Query: 26 KPHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSKICKESNDIIRKEYVCFKEGQARQSK 85
+P+ G +FDT ++A EFY YA GF ++ + + + +VC KEG S+
Sbjct: 42 EPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLNSR 101
Query: 86 VVNXXXXXXXXXXXCSANLVVVKYEFGKYMVRIFVEEHNHTL 127
C+A + V + + GK+++ +EHNH L
Sbjct: 102 T------------GCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131
Score = 41 (19.5 bits), Expect = 4.1e-35, Sum P(2) = 4.1e-35
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 555 LSEVASEIVIENLEDALEKVKLVMESCRSEG 585
L E AS+ IE +LEK KL E R G
Sbjct: 752 LREAASKY-IEFGTSSLEKYKLAYEIMREGG 781
>TAIR|locus:2012828 [details] [associations]
symbol:FRS11 "FAR1-related sequence 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC005489 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000006468
ProtClustDB:CLSN2687754 EMBL:AF424595 EMBL:BT000486 IPI:IPI00517858
RefSeq:NP_563865.1 UniGene:At.26302 IntAct:Q9SY66 PaxDb:Q9SY66
PRIDE:Q9SY66 EnsemblPlants:AT1G10240.1 GeneID:837563
KEGG:ath:AT1G10240 TAIR:At1g10240 eggNOG:NOG258635
InParanoid:Q9SY66 OMA:IRRHRTE PhylomeDB:Q9SY66
Genevestigator:Q9SY66 Uniprot:Q9SY66
Length = 680
Score = 286 (105.7 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 68/231 (29%), Positives = 116/231 (50%)
Query: 168 QSEKEKNSSFFYNIKAGCDDRITHCFWADAICRRAYKFYGDVIVFDTTYNTNRYNMIFAP 227
QS KEK+ +F + +D++ + W+ A ++Y+ +GD +VFDTT+ + M
Sbjct: 236 QSIKEKDPNFKFEFTLDANDKLENIAWSYASSIQSYELFGDAVVFDTTHRLSAVEMPLGI 295
Query: 228 FVGVNNHGQTIIFGCGFLSDETTESFLWLFEQFKEAMPGDDPKMIITDQD---------- 277
+VGVNN+G FGC L DE S+ W + F M G P+ I+TD +
Sbjct: 296 WVGVNNYGVPCFFGCVLLRDENLRSWSWALQAFTGFMNGKAPQTILTDHNMCLKEAIAGE 355
Query: 278 -PAMILHLAYWHILNKFLERLSKTVHTENYRHFQK---CIWESNTIEKFDALWKDVIDKA 333
PA L W ++ KF + + E Y ++ ++ ++E+F+ W+D+++
Sbjct: 356 MPATKHALCIWMVVGKFPSWFNAGLG-ERYNDWKAEFYRLYHLESVEEFELGWRDMVNSF 414
Query: 334 KLIENEWLQGVYEIRSKWVHAYVNHVFSAGMSSSNRAESNHAIFRRALSQQ 384
L N + +Y RS W Y+ F AGM+ + R+++ +A +R LS Q
Sbjct: 415 GLHTNRHINNLYASRSLWSLPYLRSHFLAGMTLTGRSKAINAFIQRFLSAQ 465
Score = 166 (63.5 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 80/335 (23%), Positives = 143/335 (42%)
Query: 270 KMIITDQDPAMILHLAYWHILNKFLERLSKTVHTENYRHFQK---CIWESNTIEKFDALW 326
K I + PA L W ++ KF + + E Y ++ ++ ++E+F+ W
Sbjct: 349 KEAIAGEMPATKHALCIWMVVGKFPSWFNAGLG-ERYNDWKAEFYRLYHLESVEEFELGW 407
Query: 327 KDVIDKAKLIENEWLQGVYEIRSKWVHAYVNHVFSAGMSSSNRAESNHAIFRRALSQQR- 385
+D+++ L N + +Y RS W Y+ F AGM+ + R+++ +A +R LS Q
Sbjct: 408 RDMVNSFGLHTNRHINNLYASRSLWSLPYLRSHFLAGMTLTGRSKAINAFIQRFLSAQTR 467
Query: 386 --H--EEL--IADNKD-LNERPMLRLPLQ-IEKKMS---EIYTCEIFYIFQ-DELWNSLL 433
H E++ + D KD E+ ++ LQ I K E + + F +L L+
Sbjct: 468 LAHFVEQVAVVVDFKDQATEQQTMQQNLQNISLKTGAPMESHAASVLTPFAFSKLQEQLV 527
Query: 434 HAIELV--KENEDCLVYNVVNQEDGVSKVFEVLYDKKLDFVSCICKKFKSEGIPCTHMLA 491
A + +E LV + DG KV+ V + +SC C+ F+ G C H L
Sbjct: 528 LAAHYASFQMDEGYLVRHHTKL-DGGRKVYWVPQE---GIISCSCQLFEFSGFLCRHALR 583
Query: 492 LFKKLQISFMPNIYILKRWTKAAKLERVMDRDGVEINDCSNKSILLRRTKLFQFTSNVID 551
+ +P+ Y+ RW + + R E + R +L Q N++
Sbjct: 584 VLSTGNCFQVPDRYLPLRWRRISTSFSKTFRSNAEDHG--------ERVQLLQ---NLVS 632
Query: 552 KVVLSEVASEIVIENLEDALEKVKLVMESCRSEGV 586
+V S+ E L+ A E+ +++ R + V
Sbjct: 633 TLVSESAKSK---ERLDIATEQTSILLSRIREQPV 664
Score = 140 (54.3 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 46/159 (28%), Positives = 67/159 (42%)
Query: 20 EVALNRKPHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSKICKES--NDIIRKEYVCFK 77
E N P+ G+ F T D AYEFY +AK GFSI+ + ++ K+ + R+ +VC +
Sbjct: 41 EAVHNAIPYLGQIFLTHDTAYEFYSTFAKRCGFSIRRHRTE-GKDGVGKGLTRRYFVCHR 99
Query: 78 EGQARQSKVVNXXXXXXXXXXXCS--ANLVVVKY-EFGKYMVRI--FVEEHNHTLSSPRM 132
G + C A L + K E G R+ F HNH L P
Sbjct: 100 AGNTPIKTLSEGKPQRNRRSSRCGCQAYLRISKLTELGSTEWRVTGFANHHNHELLEPNQ 159
Query: 133 VHLLRSHRSMSAVQKSLSQQLAAVNIPTYILYEHFQSEK 171
V L ++RS+S KS + I + + EK
Sbjct: 160 VRFLPAYRSISDADKSRILMFSKTGISVQQMMRLLELEK 198
>TAIR|locus:2182778 [details] [associations]
symbol:FRS10 "FAR1-related sequence 10" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AF262043
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00525509 RefSeq:NP_198205.2
UniGene:At.55070 PaxDb:Q9LKR4 EnsemblPlants:AT5G28530.1
GeneID:832948 KEGG:ath:AT5G28530 TAIR:At5g28530 eggNOG:NOG320567
HOGENOM:HOG000006468 OMA:DECAQAF PhylomeDB:Q9LKR4
ProtClustDB:CLSN2687754 Genevestigator:Q9LKR4 Uniprot:Q9LKR4
Length = 685
Score = 270 (100.1 bits), Expect = 3.8e-29, Sum P(2) = 3.8e-29
Identities = 83/345 (24%), Positives = 151/345 (43%)
Query: 160 TYILYEHFQSEKEKNSSFFYNIKAGCDDRITHCFWADAICRRAYKFYGDVIVFDTTYNTN 219
T L E + E++ F Y+ + + ++ + WA R Y +GDV+VFDT+Y +
Sbjct: 243 TLELLECCKGLAERDMDFVYDCTSDENQKVENIAWAYGDSVRGYSLFGDVVVFDTSYRSV 302
Query: 220 RYNMIFAPFVGVNNHGQTIIFGCGFLSDETTESFLWLFEQFKEAMPGDDPKMIITDQDPA 279
Y ++ F G++N+G+ ++ GC L DE+ SF W + F M G P+ I+TD D
Sbjct: 303 PYGLLLGVFFGIDNNGKAMLLGCVLLQDESCRSFTWALQTFVRFMRGRHPQTILTDIDTG 362
Query: 280 M----------ILHLAYW-HILNKFLERLSKTV--HTENYRHFQKCIWESNTIEKFDALW 326
+ H+ + HI++K S+T+ H E +R + + +++F+ W
Sbjct: 363 LKDAIGREMPNTNHVVFMSHIVSKLASWFSQTLGSHYEEFRAGFDMLCRAGNVDEFEQQW 422
Query: 327 KDVIDKAKLIENEWLQGVYEIRSKWVHAYVNHVFSAGMSSSNRAESNHAIFRRALSQQRH 386
++ + L+ + +Y R+ W+ + F A +S S + +R +
Sbjct: 423 DLLVTRFGLVPDRHAALLYSCRASWLPCCIREHFVAQTMTSEFNLSIDSFLKRVVDGATC 482
Query: 387 EELIADNKDLNERPMLRLPLQIEKKMS--EIYTCEIFYIFQDELWNSLLHAIELVKENED 444
+L+ + L L QI + + + TC +D L V +NE
Sbjct: 483 MQLLLEESALQVSAAASLAKQILPRFTYPSLKTC---MPMEDHARGILTPYAFSVLQNEM 539
Query: 445 CLV--YNVVNQEDGVSKVFEVLYDKKLDFVSCICKKFKSEGIPCT 487
L Y V +G F V + KK++ C+ ++E I C+
Sbjct: 540 VLSVQYAVAEMANGP---FIVHHYKKMEGECCVIWNPENEEIQCS 581
Score = 148 (57.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 63/299 (21%), Positives = 126/299 (42%)
Query: 283 HLAYW-HILNKFLERLSKTV--HTENYRHFQKCIWESNTIEKFDALWKDVIDKAKLIENE 339
H+ + HI++K S+T+ H E +R + + +++F+ W ++ + L+ +
Sbjct: 376 HVVFMSHIVSKLASWFSQTLGSHYEEFRAGFDMLCRAGNVDEFEQQWDLLVTRFGLVPDR 435
Query: 340 WLQGVYEIRSKWVHAYVNHVFSAGMSSSNRAESNHAIFRRALSQQRHEELIADN------ 393
+Y R+ W+ + F A +S S + +R + +L+ +
Sbjct: 436 HAALLYSCRASWLPCCIREHFVAQTMTSEFNLSIDSFLKRVVDGATCMQLLLEESALQVS 495
Query: 394 ------KDLNER---PMLRLPLQIEKKMSEIYTCEIFYIFQDELWNSLLHAIELVKENED 444
K + R P L+ + +E I T F + Q+E+ S+ +A+ + N
Sbjct: 496 AAASLAKQILPRFTYPSLKTCMPMEDHARGILTPYAFSVLQNEMVLSVQYAVAEMA-NGP 554
Query: 445 CLVYNVVNQEDGVSKVFEVLYDKKLDFVSCICKKFKSEGIPCTHMLALFKKLQISFMPNI 504
+V++ E V+++ + + + C CK+F+ GI C H L + +P
Sbjct: 555 FIVHHYKKMEGECC----VIWNPENEEIQCSCKEFEHSGILCRHTLRVLTVKNCFHIPEQ 610
Query: 505 YILKRWTKAAKLERVMDRDGVEINDCSNKSI-LLRRTKLFQFTSNVIDKVVLSEVASEI 562
Y L RW + + +++G I D S ++ L T L T ++I K L E+
Sbjct: 611 YFLLRWRQESPHVATENQNGQGIGDDSAQTFHSLTETLL---TESMISKDRLDYANQEL 666
Score = 134 (52.2 bits), Expect = 3.8e-29, Sum P(2) = 3.8e-29
Identities = 38/151 (25%), Positives = 67/151 (44%)
Query: 27 PHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSKICKESN-DIIRKEYVCFKEG--QARQ 83
P+ G+ F T D+A+E+Y +A++ GFSI+ ++ + N + R+++VC++ G Q R+
Sbjct: 55 PYVGQIFTTDDEAFEYYSTFARKSGFSIR--KARSTESQNLGVYRRDFVCYRSGFNQPRK 112
Query: 84 SKVVNXXXXXXXXXXXCSANLVVVKYEF---GKYMVRIFVEEHNHTLSSPRMVHLLRSHR 140
V C L + K + V F HNH L V LL ++R
Sbjct: 113 KANVEHPRERKSVRCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELLEDDQVRLLPAYR 172
Query: 141 SMSAVQKSLSQQLAAVNIPTYILYEHFQSEK 171
+ + L+ P + + + EK
Sbjct: 173 KIQQSDQERILLLSKAGFPVNRIVKLLELEK 203
Score = 43 (20.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 6/13 (46%), Positives = 11/13 (84%)
Query: 218 TNRYNMIFAPFVG 230
T++Y+ +F P+VG
Sbjct: 46 TSQYDTVFTPYVG 58
>TAIR|locus:2121003 [details] [associations]
symbol:FRS9 "FAR1-related sequence 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 EMBL:AL035538 EMBL:AL161593 InterPro:IPR018289
Pfam:PF10551 HOGENOM:HOG000241939 UniGene:At.31195 UniGene:At.48951
EMBL:BX827635 EMBL:AK229615 IPI:IPI00517549 PIR:T05644
RefSeq:NP_195530.2 PaxDb:Q9SZL7 PRIDE:Q9SZL7
EnsemblPlants:AT4G38170.1 GeneID:829973 KEGG:ath:AT4G38170
TAIR:At4g38170 eggNOG:NOG320990 InParanoid:Q9SZL7 OMA:RCEVYRA
Genevestigator:Q9SZL7 Uniprot:Q9SZL7
Length = 545
Score = 325 (119.5 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 69/222 (31%), Positives = 115/222 (51%)
Query: 173 KNSSFFYNIKAGCDDRITHCFWADAICRRAYKFYGDVIVFDTTYNTN-RYNMIFAPFVGV 231
+N F Y I+ C + FWAD CR Y ++GD +VFDTTY RY + FA F G
Sbjct: 31 ENPGFLYAIEDDCGN----VFWADPTCRLNYTYFGDTLVFDTTYRRGKRYQVPFAAFTGF 86
Query: 232 NNHGQTIIFGCGFLSDETTESFLWLFEQFKEAMPGDDPKMIITDQDPAMILHLAYWHILN 291
N+HGQ ++FGC + +E+ SF WLF+ + +AM P I + D ++ +A + +
Sbjct: 87 NHHGQPVLFGCALILNESESSFAWLFQTWLQAMSAPPPPSITVEPD--RLIQVAVSRVFS 144
Query: 292 KFLERLSKTV---HTEN-YRH-FQ----------KCIWESNTIEKFDALWKDVIDKAKLI 336
+ R S+ + TE H FQ C+ E+ T +F+A W ++ + +
Sbjct: 145 QTRLRFSQPLIFEETEEKLAHVFQAHPTFESEFINCVTETETAAEFEASWDSIVRRYYME 204
Query: 337 ENEWLQGVYEIRSKWVHAYVNHVFSAGMSSSNRAESNHAIFR 378
+N+WLQ +Y R +WV ++ F +S++ + ++ F+
Sbjct: 205 DNDWLQSIYNARQQWVRVFIRDTFYGELSTNEGSSILNSFFQ 246
Score = 299 (110.3 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 72/283 (25%), Positives = 138/283 (48%)
Query: 309 FQKCIWESNTIEKFDALWKDVIDKAKLIENEWLQGVYEIRSKWVHAYVNHVFSAGMSSSN 368
F C+ E+ T +F+A W ++ + + +N+WLQ +Y R +WV ++ F +S++
Sbjct: 177 FINCVTETETAAEFEASWDSIVRRYYMEDNDWLQSIYNARQQWVRVFIRDTFYGELSTNE 236
Query: 369 RAESNHAIFR-----------------RALSQQRHEELIADNKDLNERPMLRLPLQIEKK 411
+ ++ F+ +A+ R +EL AD + N P+++ P +EK+
Sbjct: 237 GSSILNSFFQGFVDASTTMQMLIKQYEKAIDSWREKELKADYEATNSTPVMKTPSPMEKQ 296
Query: 412 MSEIYTCEIFYIFQDELWNSLLHAIELVKENEDCLVYNVVNQEDGVSKVFEVLYDKKLDF 471
+ +YT F FQ+E +L ++ ++ Y V + V K V +D
Sbjct: 297 AASLYTRAAFIKFQEEFVETLAIPANIISDSGTHTTYRVAKFGE-VHKGHTVSFDSLEVK 355
Query: 472 VSCICKKFKSEGIPCTHMLALFKKLQISFMPNIYILKRWTKAAKLERVMDRDGVEINDCS 531
+C C+ F+ GI C H+LA+F + +P+ Y+L+RWTK AK+ ++ N C
Sbjct: 356 ANCSCQMFEYSGIICRHILAVFSAKNVLALPSRYLLRRWTKEAKIRGTEEQPEFS-NGCQ 414
Query: 532 NKSILLRRTKLFQFTSNVIDKVVLSEVASEIVIENLEDALEKV 574
+S+ L L Q + +++ S ++ ++ L++A +KV
Sbjct: 415 -ESLNLCFNSLRQEATKYVEEGAKSIQIYKVAMDALDEAAKKV 456
>TAIR|locus:2097543 [details] [associations]
symbol:AT3G59470 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101
EMBL:CP002686 EMBL:AY058089 EMBL:AY143081 IPI:IPI00519802
RefSeq:NP_001190136.1 RefSeq:NP_567085.1 UniGene:At.26657
IntAct:Q93Z68 PaxDb:Q93Z68 PRIDE:Q93Z68 EnsemblPlants:AT3G59470.1
EnsemblPlants:AT3G59470.2 GeneID:825116 KEGG:ath:AT3G59470
TAIR:At3g59470 eggNOG:NOG330011 InParanoid:Q93Z68 OMA:VENHNEM
PhylomeDB:Q93Z68 ProtClustDB:CLSN2689239 Genevestigator:Q93Z68
Uniprot:Q93Z68
Length = 251
Score = 151 (58.2 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 26 KPHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSKICKESNDIIRKEYVCFKEGQARQSK 85
+P+ G++F++ A+ FY YA + GF I+++ + I ++ VC KEG SK
Sbjct: 69 EPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLPSK 128
Query: 86 VVNXXXXXXXXXXXCSANLVVVKYEFGKYMVRIFVEEHNHTLSSPRMVH--LLRSHRSMS 143
C A +++ K GK+++ FV+EHNH+L R+ + + +
Sbjct: 129 RDKVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLMPGRVRRGCIYDQYPNEH 188
Query: 144 AVQKSLSQQLAAVN--IPTY-----ILYEHFQSEKEKNSSFFYNI 181
+ L QQLAA TY +L+E + E S +I
Sbjct: 189 DKIQELMQQLAAEKKRAATYKRHLEMLFEQIEQHNESLSKRIQHI 233
>TAIR|locus:2041041 [details] [associations]
symbol:AT2G43280 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] [GO:0006301 "postreplication repair"
evidence=RCA] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002685
EMBL:BT002891 EMBL:BT004409 IPI:IPI00532233 RefSeq:NP_181857.2
UniGene:At.36909 EnsemblPlants:AT2G43280.1 GeneID:818930
KEGG:ath:AT2G43280 TAIR:At2g43280 HOGENOM:HOG000090425
InParanoid:Q84J94 OMA:PREARHT PhylomeDB:Q84J94
ProtClustDB:CLSN2680222 Genevestigator:Q84J94 Uniprot:Q84J94
Length = 206
Score = 130 (50.8 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 34/110 (30%), Positives = 59/110 (53%)
Query: 26 KPHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSKICKESNDIIRKEYVCFKEGQ--ARQ 83
+P +G F++ D A FY Y++ GF +++ S + ++ I+ + + C KEG + +
Sbjct: 21 EPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIR 80
Query: 84 SKVVNXXXXXXXXXXXCSANLVVVKYE-FGKYMVRIFVEEHNHTLS-SPR 131
K + C A ++ VKY+ GK+++ FV+EHNH L SPR
Sbjct: 81 GKFGSVRKPRPSTREGCKA-MIHVKYDRSGKWVITKFVKEHNHPLVVSPR 129
>TAIR|locus:2135738 [details] [associations]
symbol:AT4G12850 "AT4G12850" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002687
EMBL:AL049640 EMBL:AL161535 HOGENOM:HOG000090425 IPI:IPI00545761
PIR:T06643 RefSeq:NP_193021.1 UniGene:At.33440 DNASU:826897
EnsemblPlants:AT4G12850.1 GeneID:826897 KEGG:ath:AT4G12850
TAIR:At4g12850 InParanoid:Q9SU01 OMA:EEIECQD PhylomeDB:Q9SU01
ProtClustDB:CLSN2916026 ArrayExpress:Q9SU01 Genevestigator:Q9SU01
Uniprot:Q9SU01
Length = 183
Score = 125 (49.1 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 26/102 (25%), Positives = 52/102 (50%)
Query: 26 KPHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSKICKESNDIIRKEYVCFKEGQARQSK 85
+P+ G KF++ ++A +FY +Y+K GF +++ + + + C K+G ++
Sbjct: 9 EPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQGFGPNNQ 68
Query: 86 VVNXXXXXXXXXXXCSANLVVVKYEFGKYMVRIFVEEHNHTL 127
C A ++V + GK++V F++EHNH+L
Sbjct: 69 --RSSSSSSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSL 108
>TAIR|locus:2079651 [details] [associations]
symbol:AT3G07500 "AT3G07500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002686
GenomeReviews:BA000014_GR HOGENOM:HOG000090425 EMBL:BT004031
EMBL:BT005083 IPI:IPI00525865 RefSeq:NP_187406.2 UniGene:At.48631
UniGene:At.71201 IntAct:Q84JA7 PRIDE:Q84JA7
EnsemblPlants:AT3G07500.1 GeneID:819938 KEGG:ath:AT3G07500
TAIR:At3g07500 eggNOG:NOG320386 InParanoid:Q84JA7 OMA:ERRRCTA
PhylomeDB:Q84JA7 ProtClustDB:CLSN2690766 Genevestigator:Q84JA7
Uniprot:Q84JA7
Length = 217
Score = 115 (45.5 bits), Expect = 0.00044, P = 0.00044
Identities = 28/103 (27%), Positives = 50/103 (48%)
Query: 26 KPHKGKKFDTLDDAYEFYKKYAKEGGFSIQINSSKICKESNDIIRKEYVCFKEGQAR-QS 84
+P G +F++ + A FY YA GF +++++ + ++ + VC KEG R +
Sbjct: 32 EPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGFRRSRP 91
Query: 85 KVVNXXXXXXXXXXXCSANLVVVKYEFGKYMVRIFVEEHNHTL 127
+ C A +VV + + G ++V F +EHNH L
Sbjct: 92 RRSESRKPRAITREGCKALIVVKREKSGTWLVTKFEKEHNHPL 134
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 695 662 0.00097 120 3 11 22 0.36 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 624 (66 KB)
Total size of DFA: 397 KB (2193 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 54.04u 0.12s 54.16t Elapsed: 00:00:04
Total cpu time: 54.05u 0.12s 54.17t Elapsed: 00:00:04
Start: Sat May 11 05:33:16 2013 End: Sat May 11 05:33:20 2013