BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046296
NKKDDDDDEKEGCEVEDDGGSYVQTMVMGGGLGNNGGKICGGRGGGDVGGGGGGSGFSGS
NNNYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILAN
PGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIKLYL

High Scoring Gene Products

Symbol, full name Information P value
AT5G20190 protein from Arabidopsis thaliana 7.1e-29
AT1G80130 protein from Arabidopsis thaliana 5.2e-26
AT4G32340 protein from Arabidopsis thaliana 1.6e-24
AT4G17940 protein from Arabidopsis thaliana 2.7e-20
TPR4
tetratricopeptide repeat 4
protein from Arabidopsis thaliana 1.3e-12
AT1G07280 protein from Arabidopsis thaliana 1.3e-09
AT2G29670 protein from Arabidopsis thaliana 1.8e-08
AT3G47080 protein from Arabidopsis thaliana 8.5e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046296
        (167 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2149314 - symbol:AT5G20190 "AT5G20190" species...   321  7.1e-29   1
TAIR|locus:2016229 - symbol:AT1G80130 species:3702 "Arabi...   294  5.2e-26   1
TAIR|locus:2127781 - symbol:AT4G32340 "AT4G32340" species...   280  1.6e-24   1
TAIR|locus:2141030 - symbol:AT4G17940 "AT4G17940" species...   240  2.7e-20   1
TAIR|locus:2197768 - symbol:TPR4 "tetratricopeptide repea...   171  1.3e-12   1
TAIR|locus:2025067 - symbol:AT1G07280 "AT1G07280" species...   149  1.3e-09   1
TAIR|locus:2060669 - symbol:AT2G29670 species:3702 "Arabi...   138  1.8e-08   1
TAIR|locus:2075616 - symbol:AT3G47080 species:3702 "Arabi...   113  8.5e-06   1


>TAIR|locus:2149314 [details] [associations]
            symbol:AT5G20190 "AT5G20190" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] InterPro:IPR011990 InterPro:IPR013026
            PROSITE:PS50293 EMBL:CP002688 Gene3D:1.25.40.10 IPI:IPI00528919
            RefSeq:NP_197519.1 UniGene:At.31218 ProteinModelPortal:F4K464
            SMR:F4K464 PRIDE:F4K464 EnsemblPlants:AT5G20190.1 GeneID:832142
            KEGG:ath:AT5G20190 OMA:HEEELEH PhylomeDB:F4K464 Uniprot:F4K464
        Length = 290

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 56/85 (65%), Positives = 72/85 (84%)

Query:    74 TDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL 133
             TD +  KMIEANPGN + L NYA+FLKEVR D+ KAEE CGRAIL +P DGN+L++YA+L
Sbjct:   156 TDVHYRKMIEANPGNGIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAEL 215

Query:   134 IWQAHKDASRAESYFDQAVKSAPDD 158
             +W+ HKD+SRAE+YF+QAV +AP+D
Sbjct:   216 VWKIHKDSSRAENYFNQAVAAAPED 240


>TAIR|locus:2016229 [details] [associations]
            symbol:AT1G80130 species:3702 "Arabidopsis thaliana"
            [GO:0016020 "membrane" evidence=IDA] [GO:0006979 "response to
            oxidative stress" evidence=IMP] InterPro:IPR011990 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0006979 GO:GO:0016020
            Gene3D:1.25.40.10 EMBL:AC009322 EMBL:AY034991 EMBL:AY063018
            EMBL:AY087456 IPI:IPI00544333 PIR:H96832 RefSeq:NP_565230.1
            UniGene:At.23459 ProteinModelPortal:Q9SSC6 SMR:Q9SSC6 PRIDE:Q9SSC6
            EnsemblPlants:AT1G80130.1 GeneID:844353 KEGG:ath:AT1G80130
            TAIR:At1g80130 eggNOG:NOG245836 HOGENOM:HOG000029161
            InParanoid:Q9SSC6 OMA:CERAILG PhylomeDB:Q9SSC6
            ProtClustDB:CLSN2917505 ArrayExpress:Q9SSC6 Genevestigator:Q9SSC6
            Uniprot:Q9SSC6
        Length = 305

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 55/85 (64%), Positives = 66/85 (77%)

Query:    74 TDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL 133
             TD Y  +MI++NPGN+LL GNYA+FLKEV+GD  KAEE C RAIL N  DGN+LSLYADL
Sbjct:   165 TDTYYREMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSLYADL 224

Query:   134 IWQAHKDASRAESYFDQAVKSAPDD 158
             I   H+D  RA SY+ QAVK +P+D
Sbjct:   225 ILHNHQDRQRAHSYYKQAVKMSPED 249


>TAIR|locus:2127781 [details] [associations]
            symbol:AT4G32340 "AT4G32340" species:3702 "Arabidopsis
            thaliana" [GO:0009965 "leaf morphogenesis" evidence=RCA]
            [GO:0030154 "cell differentiation" evidence=RCA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=RCA]
            InterPro:IPR011990 EMBL:CP002687 GenomeReviews:CT486007_GR
            Gene3D:1.25.40.10 EMBL:AL161581 EMBL:AL034567 EMBL:AL021811
            EMBL:AY087384 EMBL:AY150386 IPI:IPI00532347 PIR:T05344
            RefSeq:NP_194960.1 UniGene:At.2033 ProteinModelPortal:O49358
            SMR:O49358 STRING:O49358 PRIDE:O49358 EnsemblPlants:AT4G32340.1
            GeneID:829368 KEGG:ath:AT4G32340 TAIR:At4g32340 eggNOG:NOG269023
            HOGENOM:HOG000114717 InParanoid:O49358 OMA:YHEETAS PhylomeDB:O49358
            ProtClustDB:CLSN2916166 Genevestigator:O49358 Uniprot:O49358
        Length = 238

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 55/93 (59%), Positives = 70/93 (75%)

Query:    75 DAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPG-DGNILSLYADL 133
             D Y E+MI+  PG+ LLL NYARFLKEV+GD  KAEE C RA+L+  G DG +LS+Y DL
Sbjct:   111 DGYYEEMIQRYPGDTLLLSNYARFLKEVKGDGRKAEEYCERAMLSESGRDGELLSMYGDL 170

Query:   134 IWQAHKDASRAESYFDQAVKSAPDDWLNLIKLY 166
             IW+ H D  RA+SY+DQAV+S+PDD  N++  Y
Sbjct:   171 IWKNHGDGVRAQSYYDQAVQSSPDD-CNVLASY 202

 Score = 91 (37.1 bits), Expect = 0.00057, P = 0.00057
 Identities = 20/73 (27%), Positives = 38/73 (52%)

Query:    75 DAYNEKMIEANPG-NALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL 133
             + Y E+ + +  G +  LL  Y   + +  GD  +A+    +A+ ++P D N+L+ YA  
Sbjct:   146 EEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYYDQAVQSSPDDCNVLASYARF 205

Query:   134 IWQAHKDASRAES 146
             +W A ++    ES
Sbjct:   206 LWDAEEEVEEEES 218


>TAIR|locus:2141030 [details] [associations]
            symbol:AT4G17940 "AT4G17940" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] InterPro:IPR011990 InterPro:IPR013026
            PROSITE:PS50293 EMBL:CP002687 Gene3D:1.25.40.10 EMBL:AK226990
            IPI:IPI00547432 RefSeq:NP_567545.1 UniGene:At.43075
            ProteinModelPortal:Q0WUZ1 SMR:Q0WUZ1 PRIDE:Q0WUZ1
            EnsemblPlants:AT4G17940.1 GeneID:827519 KEGG:ath:AT4G17940
            TAIR:At4g17940 HOGENOM:HOG000092984 InParanoid:Q0WUZ1 OMA:NDCMVLG
            PhylomeDB:Q0WUZ1 ProtClustDB:CLSN2689490 Genevestigator:Q0WUZ1
            Uniprot:Q0WUZ1
        Length = 274

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 48/88 (54%), Positives = 60/88 (68%)

Query:    75 DAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLI 134
             D Y E M+ +NP N+LLL NY +FL EV  D   AEE  GRAIL NPGDG  LS+Y  LI
Sbjct:   152 DYYRE-MLRSNPNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLI 210

Query:   135 WQAHKDASRAESYFDQAVKSAPDDWLNL 162
             W+  +D  RA+ YFDQAV ++P+D + L
Sbjct:   211 WETKRDEKRAQGYFDQAVNASPNDCMVL 238

 Score = 98 (39.6 bits), Expect = 0.00013, P = 0.00013
 Identities = 21/64 (32%), Positives = 34/64 (53%)

Query:    77 YNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQ 136
             Y   ++E NPG+   L  Y R + E + D  +A+    +A+ A+P D  +L  YA  +W+
Sbjct:   189 YGRAILE-NPGDGEALSMYGRLIWETKRDEKRAQGYFDQAVNASPNDCMVLGSYARFMWE 247

Query:   137 AHKD 140
             A  D
Sbjct:   248 AEDD 251


>TAIR|locus:2197768 [details] [associations]
            symbol:TPR4 "tetratricopeptide repeat 4" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
            Pfam:PF13181 PROSITE:PS50293 EMBL:CP002684 Gene3D:1.25.40.10
            EMBL:AY065305 EMBL:AY096435 IPI:IPI00522781 RefSeq:NP_563709.1
            UniGene:At.28463 ProteinModelPortal:Q8VZ31 SMR:Q8VZ31 PRIDE:Q8VZ31
            EnsemblPlants:AT1G04530.1 GeneID:839500 KEGG:ath:AT1G04530
            TAIR:At1g04530 InParanoid:Q8VZ31 OMA:INNDHEK PhylomeDB:Q8VZ31
            ProtClustDB:CLSN2916961 ArrayExpress:Q8VZ31 Genevestigator:Q8VZ31
            Uniprot:Q8VZ31
        Length = 310

 Score = 171 (65.3 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 35/82 (42%), Positives = 54/82 (65%)

Query:    77 YNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQ 136
             Y + M+E  P + LLL NYA+FL E +GD + AEE   +  +  P DG  L+ Y  L+ +
Sbjct:   124 YYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVALANYGRLVMK 182

Query:   137 AHKDASRAESYFDQAVKSAPDD 158
              H+D ++A SYF++AV+++PDD
Sbjct:   183 LHQDEAKAMSYFERAVQASPDD 204

 Score = 108 (43.1 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 21/66 (31%), Positives = 34/66 (51%)

Query:    75 DAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLI 134
             + Y  K     P + + L NY R + ++  D AKA     RA+ A+P D  +L+ YA  +
Sbjct:   156 EEYYHKCTVVEPSDGVALANYGRLVMKLHQDEAKAMSYFERAVQASPDDSIVLAAYASFL 215

Query:   135 WQAHKD 140
             W+ + D
Sbjct:   216 WEINAD 221


>TAIR|locus:2025067 [details] [associations]
            symbol:AT1G07280 "AT1G07280" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0000023
            "maltose metabolic process" evidence=RCA] [GO:0019252 "starch
            biosynthetic process" evidence=RCA] InterPro:IPR011990
            InterPro:IPR013026 PROSITE:PS50293 EMBL:CP002684 Gene3D:1.25.40.10
            UniGene:At.28743 HOGENOM:HOG000241467 ProtClustDB:CLSN2688551
            EMBL:AY065061 EMBL:AY133574 IPI:IPI00540005 RefSeq:NP_001030984.1
            RefSeq:NP_001117242.1 RefSeq:NP_172208.2 UniGene:At.20235
            ProteinModelPortal:Q8VZC8 SMR:Q8VZC8 EnsemblPlants:AT1G07280.1
            EnsemblPlants:AT1G07280.2 EnsemblPlants:AT1G07280.3 GeneID:837239
            KEGG:ath:AT1G07280 TAIR:At1g07280 InParanoid:Q8VZC8 OMA:EETYLEA
            PhylomeDB:Q8VZC8 Genevestigator:Q8VZC8 Uniprot:Q8VZC8
        Length = 552

 Score = 149 (57.5 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 31/83 (37%), Positives = 46/83 (55%)

Query:    74 TDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL 133
             T+   +  +   PGN LLL NYA+FL  +  D+ +AE+   RA  A P D   L+ YA  
Sbjct:   435 TELLYQTGLSQEPGNVLLLANYAQFLYLIIHDYDRAEKYFKRAAKAEPADAEALNKYATF 494

Query:   134 IWQAHKDASRAESYFDQAVKSAP 156
             +W+A  D  RAE  + +A+ + P
Sbjct:   495 LWRARNDIWRAEETYLEAISADP 517


>TAIR|locus:2060669 [details] [associations]
            symbol:AT2G29670 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR011990
            InterPro:IPR013026 InterPro:IPR019734 PROSITE:PS50005
            PROSITE:PS50293 EMBL:CP002685 GenomeReviews:CT485783_GR
            Gene3D:1.25.40.10 EMBL:AC005496 EMBL:AF375460 EMBL:AY074336
            EMBL:AY096656 EMBL:BT000642 IPI:IPI00536136 PIR:B84699
            RefSeq:NP_565685.1 UniGene:At.28743 ProteinModelPortal:O82388
            SMR:O82388 EnsemblPlants:AT2G29670.1 GeneID:817517
            KEGG:ath:AT2G29670 TAIR:At2g29670 HOGENOM:HOG000241467
            InParanoid:O82388 OMA:DDESHED PhylomeDB:O82388
            ProtClustDB:CLSN2688551 Genevestigator:O82388 Uniprot:O82388
        Length = 536

 Score = 138 (53.6 bits), Expect = 1.8e-08, P = 1.8e-08
 Identities = 31/83 (37%), Positives = 42/83 (50%)

Query:    74 TDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL 133
             T+   +  +   P N LLL NYA+FL  V  D  +AEE   RA+   P D    S YA  
Sbjct:   420 TELMYQTELSQEPNNPLLLANYAQFLYLVSNDHDRAEEYFKRAVGVEPKDAEAFSKYATF 479

Query:   134 IWQAHKDASRAESYFDQAVKSAP 156
             +W+A  D   AE  F +A+ + P
Sbjct:   480 LWRARDDLWAAEETFLEAIDADP 502


>TAIR|locus:2075616 [details] [associations]
            symbol:AT3G47080 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011990
            InterPro:IPR013026 PROSITE:PS50293 EMBL:CP002686
            GenomeReviews:BA000014_GR Gene3D:1.25.40.10 EMBL:AL133292
            HOGENOM:HOG000241467 EMBL:AY039956 EMBL:AY079400 IPI:IPI00548619
            PIR:T45644 RefSeq:NP_190292.1 UniGene:At.22244
            ProteinModelPortal:Q9SD65 SMR:Q9SD65 IntAct:Q9SD65
            EnsemblPlants:AT3G47080.1 GeneID:823861 KEGG:ath:AT3G47080
            TAIR:At3g47080 eggNOG:NOG260732 InParanoid:Q9SD65 OMA:HERAENC
            PhylomeDB:Q9SD65 ProtClustDB:CLSN2915688 ArrayExpress:Q9SD65
            Genevestigator:Q9SD65 Uniprot:Q9SD65
        Length = 515

 Score = 113 (44.8 bits), Expect = 8.5e-06, P = 8.5e-06
 Identities = 27/71 (38%), Positives = 36/71 (50%)

Query:    86 PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAE 145
             P N LLL NYA+FL  V  D  +AE    +AI +   D    S YA  +W+   D   AE
Sbjct:   412 PDNHLLLANYAQFLYLVTQDHERAENCFKKAIESEDVDAETYSKYAIFLWKVRNDLWAAE 471

Query:   146 SYFDQAVKSAP 156
               F +A+ + P
Sbjct:   472 ENFLEAISADP 482


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      167       103   0.00091  102 3  11 22  0.42    30
                                                     29  0.49    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  579 (62 KB)
  Total size of DFA:  122 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.27u 0.07s 10.34t   Elapsed:  00:00:03
  Total cpu time:  10.27u 0.07s 10.34t   Elapsed:  00:00:03
  Start:  Sat May 11 05:41:10 2013   End:  Sat May 11 05:41:13 2013

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