Query 046296
Match_columns 167
No_of_seqs 296 out of 1666
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 18:37:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046296.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046296hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.9 1.1E-20 3.8E-25 136.3 14.6 102 62-165 20-121 (126)
2 4ga2_A E3 SUMO-protein ligase 99.8 4.6E-19 1.6E-23 130.8 12.0 99 62-162 38-137 (150)
3 3gyz_A Chaperone protein IPGC; 99.8 7.9E-19 2.7E-23 131.5 12.3 95 63-159 44-138 (151)
4 3upv_A Heat shock protein STI1 99.8 4.6E-18 1.6E-22 120.0 13.1 100 63-164 12-117 (126)
5 4ga2_A E3 SUMO-protein ligase 99.8 6.9E-19 2.4E-23 129.9 7.2 101 63-165 5-105 (150)
6 3sz7_A HSC70 cochaperone (SGT) 99.8 7.4E-18 2.5E-22 124.4 12.2 98 63-162 19-116 (164)
7 1hxi_A PEX5, peroxisome target 99.8 5E-18 1.7E-22 121.3 10.9 96 63-160 25-120 (121)
8 2vgx_A Chaperone SYCD; alterna 99.8 1.1E-17 3.6E-22 123.5 12.1 97 63-161 29-125 (148)
9 2xcb_A PCRH, regulatory protei 99.8 8.3E-18 2.8E-22 122.0 11.3 97 63-161 26-122 (142)
10 4gcn_A Protein STI-1; structur 99.8 1.3E-17 4.5E-22 119.9 12.2 98 62-162 15-119 (127)
11 3urz_A Uncharacterized protein 99.7 1.6E-17 5.4E-22 128.1 12.2 101 63-165 12-128 (208)
12 1elw_A TPR1-domain of HOP; HOP 99.7 1.4E-16 4.6E-21 108.3 14.1 101 63-165 12-112 (118)
13 3rkv_A Putative peptidylprolyl 99.7 3.1E-17 1.1E-21 120.8 11.3 97 62-160 18-132 (162)
14 2pl2_A Hypothetical conserved 99.7 6.9E-17 2.4E-21 125.2 12.2 100 63-164 13-123 (217)
15 3q49_B STIP1 homology and U bo 99.7 1.2E-16 4.1E-21 113.0 11.9 93 63-157 17-109 (137)
16 2vyi_A SGTA protein; chaperone 99.7 4.7E-16 1.6E-20 107.2 14.5 100 63-164 20-119 (131)
17 4gyw_A UDP-N-acetylglucosamine 99.7 1.3E-16 4.4E-21 145.9 14.6 100 63-164 17-116 (723)
18 2lni_A Stress-induced-phosphop 99.7 1.2E-16 4.2E-21 111.2 11.1 100 63-164 24-123 (133)
19 2dba_A Smooth muscle cell asso 99.7 3.5E-16 1.2E-20 111.0 12.9 101 62-164 35-138 (148)
20 3k9i_A BH0479 protein; putativ 99.7 3.1E-17 1.1E-21 115.3 7.2 93 68-162 3-98 (117)
21 1zu2_A Mitochondrial import re 99.7 1.2E-16 3.9E-21 121.8 10.6 95 68-164 15-130 (158)
22 1a17_A Serine/threonine protei 99.7 7.6E-16 2.6E-20 111.3 14.5 99 63-163 21-119 (166)
23 1na0_A Designed protein CTPR3; 99.7 1.1E-15 3.8E-20 104.5 14.6 101 63-165 17-117 (125)
24 3vtx_A MAMA; tetratricopeptide 99.7 2.6E-16 8.7E-21 117.0 12.0 96 63-160 81-176 (184)
25 4gyw_A UDP-N-acetylglucosamine 99.7 2.6E-16 8.9E-21 143.9 14.6 101 63-165 51-151 (723)
26 2hr2_A Hypothetical protein; a 99.7 8.8E-17 3E-21 122.6 9.5 96 62-159 18-136 (159)
27 2xev_A YBGF; tetratricopeptide 99.7 8.7E-16 3E-20 107.5 13.6 98 63-162 10-113 (129)
28 2pl2_A Hypothetical conserved 99.7 5.8E-16 2E-20 120.0 12.9 96 64-162 48-154 (217)
29 2kck_A TPR repeat; tetratricop 99.7 5.2E-16 1.8E-20 104.8 11.1 95 63-159 14-111 (112)
30 2fbn_A 70 kDa peptidylprolyl i 99.7 9.5E-16 3.3E-20 116.2 13.6 100 63-164 46-161 (198)
31 1p5q_A FKBP52, FK506-binding p 99.7 1.1E-15 3.8E-20 126.7 13.9 101 63-165 155-270 (336)
32 3vtx_A MAMA; tetratricopeptide 99.7 2.6E-15 8.9E-20 111.5 14.0 100 63-164 13-146 (184)
33 4i17_A Hypothetical protein; T 99.7 2.3E-15 7.8E-20 115.6 13.7 98 62-161 14-112 (228)
34 2h6f_A Protein farnesyltransfe 99.6 8.9E-16 3E-20 130.5 12.2 101 63-165 105-206 (382)
35 3gyz_A Chaperone protein IPGC; 99.6 5.1E-17 1.7E-21 121.6 3.5 94 70-165 17-110 (151)
36 2h6f_A Protein farnesyltransfe 99.6 6.2E-16 2.1E-20 131.5 10.6 101 63-165 139-240 (382)
37 1elr_A TPR2A-domain of HOP; HO 99.6 3.2E-15 1.1E-19 103.2 12.2 98 63-163 12-116 (131)
38 3urz_A Uncharacterized protein 99.6 1.4E-15 4.8E-20 117.1 11.2 97 62-159 61-191 (208)
39 4i17_A Hypothetical protein; T 99.6 1.5E-15 5E-20 116.7 11.2 100 63-164 50-158 (228)
40 2e2e_A Formate-dependent nitri 99.6 4.3E-15 1.5E-19 110.1 11.7 96 63-159 52-149 (177)
41 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 3.7E-15 1.3E-19 128.5 12.1 101 62-164 275-390 (457)
42 1wao_1 Serine/threonine protei 99.6 7.1E-15 2.4E-19 127.7 13.8 101 62-164 13-113 (477)
43 1xnf_A Lipoprotein NLPI; TPR, 99.6 1.1E-14 3.7E-19 113.0 13.4 98 63-162 51-148 (275)
44 2fo7_A Synthetic consensus TPR 99.6 2.6E-14 8.8E-19 98.2 13.3 99 63-163 9-107 (136)
45 3as5_A MAMA; tetratricopeptide 99.6 4.2E-14 1.4E-18 102.6 14.5 100 63-164 50-149 (186)
46 3uq3_A Heat shock protein STI1 99.6 1.9E-14 6.6E-19 110.1 13.1 100 63-164 147-252 (258)
47 2vgx_A Chaperone SYCD; alterna 99.6 1.9E-15 6.5E-20 111.3 7.0 88 76-165 8-95 (148)
48 2c2l_A CHIP, carboxy terminus 99.6 4.9E-15 1.7E-19 119.6 10.0 95 63-159 12-106 (281)
49 1ihg_A Cyclophilin 40; ppiase 99.6 7.2E-15 2.5E-19 124.0 11.1 102 62-165 230-347 (370)
50 2kat_A Uncharacterized protein 99.6 1.2E-14 4.1E-19 101.0 10.3 84 72-157 2-85 (115)
51 2e2e_A Formate-dependent nitri 99.6 9.7E-15 3.3E-19 108.2 9.8 98 65-164 20-120 (177)
52 1hh8_A P67PHOX, NCF-2, neutrop 99.6 2.5E-14 8.7E-19 108.0 12.3 95 63-159 45-155 (213)
53 4eqf_A PEX5-related protein; a 99.6 3.4E-14 1.2E-18 115.6 13.4 101 63-165 185-287 (365)
54 2if4_A ATFKBP42; FKBP-like, al 99.6 4.2E-15 1.4E-19 123.4 7.9 101 63-165 187-304 (338)
55 2q7f_A YRRB protein; TPR, prot 99.6 4.1E-14 1.4E-18 107.8 12.6 98 64-163 134-231 (243)
56 4gco_A Protein STI-1; structur 99.6 1.4E-14 4.7E-19 104.1 9.3 84 80-165 4-87 (126)
57 3mkr_A Coatomer subunit epsilo 99.6 5.2E-14 1.8E-18 114.4 13.2 93 68-162 179-272 (291)
58 2fo7_A Synthetic consensus TPR 99.6 7E-14 2.4E-18 96.0 12.0 94 63-158 43-136 (136)
59 2q7f_A YRRB protein; TPR, prot 99.6 1.3E-13 4.5E-18 105.0 14.5 97 64-162 66-162 (243)
60 2xcb_A PCRH, regulatory protei 99.5 9.5E-15 3.2E-19 105.7 7.5 87 76-164 5-91 (142)
61 2vsy_A XCC0866; transferase, g 99.5 5.3E-14 1.8E-18 122.8 13.3 101 63-165 31-131 (568)
62 1fch_A Peroxisomal targeting s 99.5 7.1E-14 2.4E-18 112.9 12.9 93 64-158 226-318 (368)
63 3uq3_A Heat shock protein STI1 99.5 7.3E-14 2.5E-18 106.8 12.1 100 63-164 87-212 (258)
64 1w3b_A UDP-N-acetylglucosamine 99.5 1E-13 3.6E-18 113.8 13.6 94 66-161 214-307 (388)
65 4abn_A Tetratricopeptide repea 99.5 3.3E-14 1.1E-18 122.8 11.1 94 69-164 193-297 (474)
66 4eqf_A PEX5-related protein; a 99.5 2.7E-14 9.3E-19 116.2 9.9 99 62-162 72-170 (365)
67 1w3b_A UDP-N-acetylglucosamine 99.5 8.2E-14 2.8E-18 114.4 12.8 99 63-163 245-343 (388)
68 3as5_A MAMA; tetratricopeptide 99.5 5.7E-14 1.9E-18 101.9 10.5 100 63-164 16-115 (186)
69 4abn_A Tetratricopeptide repea 99.5 3.7E-14 1.3E-18 122.4 11.0 100 63-165 110-219 (474)
70 3ieg_A DNAJ homolog subfamily 99.5 1E-13 3.4E-18 110.4 12.4 99 63-163 11-112 (359)
71 3u4t_A TPR repeat-containing p 99.5 7.1E-14 2.4E-18 108.6 11.0 98 63-162 82-179 (272)
72 3qou_A Protein YBBN; thioredox 99.5 9.6E-14 3.3E-18 112.2 12.0 99 63-163 125-259 (287)
73 3ieg_A DNAJ homolog subfamily 99.5 2.8E-13 9.4E-18 107.9 14.2 100 63-164 242-345 (359)
74 3mkr_A Coatomer subunit epsilo 99.5 1.8E-13 6.2E-18 111.1 13.1 101 63-165 138-240 (291)
75 2vq2_A PILW, putative fimbrial 99.5 2.8E-13 9.7E-18 101.5 13.0 88 64-153 17-105 (225)
76 3cv0_A Peroxisome targeting si 99.5 2.5E-13 8.4E-18 107.3 13.1 95 65-161 148-242 (327)
77 2vq2_A PILW, putative fimbrial 99.5 2.9E-13 9.8E-18 101.5 12.7 97 64-162 51-150 (225)
78 2pzi_A Probable serine/threoni 99.5 3.1E-14 1.1E-18 128.3 8.7 99 63-164 441-539 (681)
79 2ho1_A Type 4 fimbrial biogene 99.5 2.8E-13 9.7E-18 104.3 12.8 94 65-160 81-176 (252)
80 2pzi_A Probable serine/threoni 99.5 1.9E-14 6.5E-19 129.7 6.5 99 63-164 475-573 (681)
81 3hym_B Cell division cycle pro 99.5 1.2E-13 4.1E-18 109.3 10.2 100 63-164 201-309 (330)
82 2ho1_A Type 4 fimbrial biogene 99.5 6.1E-13 2.1E-17 102.4 14.0 97 64-162 150-246 (252)
83 3hym_B Cell division cycle pro 99.5 2.8E-13 9.5E-18 107.1 12.3 97 64-162 99-196 (330)
84 1hh8_A P67PHOX, NCF-2, neutrop 99.5 2.5E-13 8.7E-18 102.5 11.5 92 63-159 14-105 (213)
85 2y4t_A DNAJ homolog subfamily 99.5 3.7E-13 1.3E-17 111.7 13.5 95 63-159 34-128 (450)
86 1fch_A Peroxisomal targeting s 99.5 3.7E-13 1.3E-17 108.7 13.1 99 62-162 71-169 (368)
87 3cv0_A Peroxisome targeting si 99.5 4.3E-13 1.5E-17 105.9 12.9 94 63-158 180-273 (327)
88 3u4t_A TPR repeat-containing p 99.5 1.5E-13 5E-18 106.8 9.8 96 64-162 12-111 (272)
89 1xnf_A Lipoprotein NLPI; TPR, 99.5 1.3E-13 4.6E-18 106.7 9.4 98 65-164 15-116 (275)
90 3qky_A Outer membrane assembly 99.5 3.5E-13 1.2E-17 105.7 10.9 93 64-158 61-181 (261)
91 2y4t_A DNAJ homolog subfamily 99.5 6.4E-13 2.2E-17 110.2 13.0 101 62-164 264-368 (450)
92 2vsy_A XCC0866; transferase, g 99.5 5.7E-13 2E-17 116.2 13.2 99 63-163 65-166 (568)
93 3ma5_A Tetratricopeptide repea 99.4 1.9E-13 6.5E-18 93.9 7.1 73 84-158 2-74 (100)
94 2l6j_A TPR repeat-containing p 99.4 2.9E-14 9.9E-19 97.0 2.8 86 63-150 12-103 (111)
95 3fp2_A TPR repeat-containing p 99.4 1.3E-12 4.3E-17 110.6 13.0 100 63-164 284-383 (537)
96 2r5s_A Uncharacterized protein 99.4 3.2E-13 1.1E-17 100.7 8.1 93 64-158 15-141 (176)
97 2r5s_A Uncharacterized protein 99.4 1.1E-13 3.8E-18 103.3 5.4 75 85-162 2-76 (176)
98 1na3_A Designed protein CTPR2; 99.4 1.8E-12 6.2E-17 85.1 10.7 77 87-165 7-83 (91)
99 2gw1_A Mitochondrial precursor 99.4 1.4E-12 4.7E-17 109.4 12.3 95 62-159 13-107 (514)
100 2kc7_A BFR218_protein; tetratr 99.4 1.4E-13 5E-18 92.7 5.1 87 63-159 8-95 (99)
101 2xpi_A Anaphase-promoting comp 99.4 2.7E-12 9.1E-17 110.4 13.8 100 63-164 483-589 (597)
102 2ond_A Cleavage stimulation fa 99.4 9.5E-13 3.2E-17 106.5 10.2 95 67-162 111-206 (308)
103 3qky_A Outer membrane assembly 99.4 7.3E-13 2.5E-17 103.9 9.2 93 68-162 110-232 (261)
104 3fp2_A TPR repeat-containing p 99.4 6.2E-13 2.1E-17 112.5 9.4 97 62-161 32-128 (537)
105 3upv_A Heat shock protein STI1 99.4 2.7E-12 9.2E-17 90.0 10.7 77 86-164 1-77 (126)
106 1a17_A Serine/threonine protei 99.4 3.5E-12 1.2E-16 91.7 11.4 90 63-154 55-146 (166)
107 2yhc_A BAMD, UPF0169 lipoprote 99.4 1.5E-12 5.1E-17 100.8 10.1 71 64-135 13-89 (225)
108 2yhc_A BAMD, UPF0169 lipoprote 99.4 1.1E-12 3.8E-17 101.6 9.2 71 88-160 3-76 (225)
109 4g1t_A Interferon-induced prot 99.4 4.6E-12 1.6E-16 106.1 13.6 101 63-164 59-177 (472)
110 2ond_A Cleavage stimulation fa 99.4 2.1E-12 7.1E-17 104.5 10.8 90 71-162 80-171 (308)
111 1na3_A Designed protein CTPR2; 99.4 4.7E-12 1.6E-16 83.1 10.5 73 63-136 17-89 (91)
112 2xpi_A Anaphase-promoting comp 99.4 5.3E-12 1.8E-16 108.6 13.5 99 63-163 381-479 (597)
113 3q49_B STIP1 homology and U bo 99.4 8.1E-12 2.8E-16 87.8 12.1 80 83-164 3-82 (137)
114 2gw1_A Mitochondrial precursor 99.4 2E-12 6.9E-17 108.3 9.6 100 63-164 380-488 (514)
115 2kck_A TPR repeat; tetratricop 99.4 3.2E-12 1.1E-16 85.8 8.7 79 84-164 1-81 (112)
116 1qqe_A Vesicular transport pro 99.4 1.2E-12 4E-17 105.5 7.3 96 63-160 125-234 (292)
117 1qqe_A Vesicular transport pro 99.4 2.4E-12 8.1E-17 103.7 9.0 96 63-160 85-193 (292)
118 3sz7_A HSC70 cochaperone (SGT) 99.3 7.3E-12 2.5E-16 91.9 10.8 79 85-165 7-85 (164)
119 1p5q_A FKBP52, FK506-binding p 99.3 6.5E-12 2.2E-16 103.9 11.4 90 63-154 204-294 (336)
120 2l6j_A TPR repeat-containing p 99.3 9.2E-12 3.2E-16 84.3 10.2 69 88-158 3-71 (111)
121 4gcn_A Protein STI-1; structur 99.3 1.9E-12 6.7E-17 92.6 6.6 71 87-159 6-76 (127)
122 3edt_B KLC 2, kinesin light ch 99.3 3E-12 1E-16 98.5 7.1 90 63-154 51-156 (283)
123 2if4_A ATFKBP42; FKBP-like, al 99.3 1.4E-12 4.6E-17 108.2 5.1 97 63-160 238-334 (338)
124 4g1t_A Interferon-induced prot 99.3 2.4E-11 8.2E-16 101.7 12.8 96 67-163 150-285 (472)
125 1hxi_A PEX5, peroxisome target 99.3 2.7E-11 9.2E-16 86.0 11.1 73 91-165 19-91 (121)
126 3bee_A Putative YFRE protein; 99.3 1.6E-11 5.6E-16 84.8 9.6 73 85-159 2-77 (93)
127 3edt_B KLC 2, kinesin light ch 99.3 8.6E-12 2.9E-16 96.0 7.1 92 63-156 93-200 (283)
128 1wao_1 Serine/threonine protei 99.3 2.6E-12 9E-17 111.5 4.6 94 63-158 48-154 (477)
129 3nf1_A KLC 1, kinesin light ch 99.2 1.8E-11 6.2E-16 95.8 8.1 93 63-157 161-310 (311)
130 1kt0_A FKBP51, 51 kDa FK506-bi 99.2 2E-12 6.9E-17 111.3 2.7 99 64-164 243-356 (457)
131 2fbn_A 70 kDa peptidylprolyl i 99.2 3.2E-11 1.1E-15 91.1 8.7 90 63-154 96-186 (198)
132 1pc2_A Mitochondria fission pr 99.2 9E-11 3.1E-15 88.6 10.9 93 69-163 12-109 (152)
133 2lni_A Stress-induced-phosphop 99.2 5.9E-11 2E-15 82.0 9.2 78 85-164 12-89 (133)
134 1na0_A Designed protein CTPR3; 99.2 2.2E-10 7.4E-15 77.7 11.8 79 84-164 3-82 (125)
135 2kc7_A BFR218_protein; tetratr 99.2 1.2E-10 4.1E-15 78.1 10.1 68 93-162 4-72 (99)
136 2vyi_A SGTA protein; chaperone 99.2 8.1E-11 2.8E-15 80.5 9.4 77 63-141 54-130 (131)
137 2ooe_A Cleavage stimulation fa 99.2 8.1E-11 2.8E-15 101.6 10.9 101 64-165 330-431 (530)
138 4a1s_A PINS, partner of inscut 99.2 4.3E-11 1.5E-15 98.3 8.7 91 63-155 56-156 (411)
139 1elw_A TPR1-domain of HOP; HOP 99.2 2.8E-10 9.6E-15 76.6 11.0 75 88-164 3-77 (118)
140 3k9i_A BH0479 protein; putativ 99.2 8E-11 2.7E-15 82.1 8.3 70 63-133 35-104 (117)
141 2dba_A Smooth muscle cell asso 99.2 2.2E-10 7.5E-15 80.7 10.4 81 82-164 21-104 (148)
142 2ifu_A Gamma-SNAP; membrane fu 99.2 6.7E-11 2.3E-15 95.8 8.2 93 63-159 124-228 (307)
143 3qou_A Protein YBBN; thioredox 99.2 9.4E-11 3.2E-15 94.5 8.9 86 67-154 197-284 (287)
144 3ro3_A PINS homolog, G-protein 99.2 8.4E-11 2.9E-15 82.8 7.6 92 63-156 17-120 (164)
145 3ro2_A PINS homolog, G-protein 99.2 1.2E-10 4.1E-15 91.1 9.1 93 63-157 13-115 (338)
146 2qfc_A PLCR protein; TPR, HTH, 99.1 5.1E-10 1.7E-14 89.6 12.6 92 63-156 123-227 (293)
147 1ouv_A Conserved hypothetical 99.1 9.3E-10 3.2E-14 86.2 13.8 87 64-155 15-108 (273)
148 3nf1_A KLC 1, kinesin light ch 99.1 4.9E-11 1.7E-15 93.3 6.4 90 63-154 77-182 (311)
149 3ro3_A PINS homolog, G-protein 99.1 1.6E-10 5.4E-15 81.4 8.4 93 63-157 57-161 (164)
150 2ooe_A Cleavage stimulation fa 99.1 3.1E-10 1E-14 98.0 11.7 92 72-164 255-361 (530)
151 3u3w_A Transcriptional activat 99.1 8.3E-11 2.8E-15 94.2 7.2 94 63-158 123-229 (293)
152 3ulq_A Response regulator aspa 99.1 1.2E-10 4.1E-15 95.9 8.3 92 63-156 192-295 (383)
153 2c2l_A CHIP, carboxy terminus 99.1 4.1E-10 1.4E-14 90.5 11.2 78 86-165 1-78 (281)
154 3dra_A Protein farnesyltransfe 99.1 7.9E-10 2.7E-14 91.7 13.1 93 69-163 47-148 (306)
155 2ifu_A Gamma-SNAP; membrane fu 99.1 5.1E-11 1.7E-15 96.5 5.6 93 63-158 84-188 (307)
156 3sf4_A G-protein-signaling mod 99.1 2.1E-10 7.1E-15 93.0 9.1 93 63-157 17-119 (406)
157 3u3w_A Transcriptional activat 99.1 1.1E-10 3.6E-15 93.6 7.1 91 63-155 163-267 (293)
158 1elr_A TPR2A-domain of HOP; HO 99.1 2.9E-10 9.9E-15 77.9 8.3 71 86-158 1-71 (131)
159 3rkv_A Putative peptidylprolyl 99.1 1.5E-10 5E-15 84.7 7.1 73 63-136 71-144 (162)
160 3ulq_A Response regulator aspa 99.1 1.4E-10 4.7E-15 95.6 7.6 98 63-162 151-267 (383)
161 3gw4_A Uncharacterized protein 99.1 2.1E-10 7E-15 85.1 7.6 91 63-155 34-137 (203)
162 1dce_A Protein (RAB geranylger 99.1 9.9E-10 3.4E-14 97.7 13.4 92 70-163 44-147 (567)
163 2qfc_A PLCR protein; TPR, HTH, 99.1 4.7E-10 1.6E-14 89.8 10.2 92 62-155 162-267 (293)
164 3u64_A Protein TP_0956; tetrat 99.1 3.2E-10 1.1E-14 94.0 9.4 88 69-157 177-272 (301)
165 1ihg_A Cyclophilin 40; ppiase 99.1 4E-10 1.4E-14 94.9 9.6 83 63-147 281-363 (370)
166 2hr2_A Hypothetical protein; a 99.1 7.6E-10 2.6E-14 84.1 10.1 72 89-162 11-101 (159)
167 3rjv_A Putative SEL1 repeat pr 99.1 3.3E-10 1.1E-14 87.3 8.1 82 70-154 68-158 (212)
168 2xev_A YBGF; tetratricopeptide 99.1 8.1E-10 2.8E-14 76.7 9.3 71 90-162 3-79 (129)
169 3rjv_A Putative SEL1 repeat pr 99.1 5.5E-10 1.9E-14 86.0 9.1 89 68-158 102-201 (212)
170 1dce_A Protein (RAB geranylger 99.1 8.1E-10 2.8E-14 98.2 11.4 92 71-164 89-183 (567)
171 1ouv_A Conserved hypothetical 99.1 3.2E-09 1.1E-13 83.2 13.1 84 68-156 55-145 (273)
172 3q15_A PSP28, response regulat 99.1 5.1E-10 1.7E-14 92.3 8.9 93 63-157 190-293 (378)
173 3dra_A Protein farnesyltransfe 99.0 2.1E-09 7.3E-14 89.1 12.4 92 70-163 84-184 (306)
174 3sf4_A G-protein-signaling mod 99.0 2.2E-10 7.4E-15 92.9 5.9 93 63-157 195-299 (406)
175 3q7a_A Farnesyltransferase alp 99.0 2.7E-09 9.4E-14 90.2 12.8 94 68-163 67-163 (349)
176 3dss_A Geranylgeranyl transfer 99.0 3.1E-09 1.1E-13 89.2 13.0 92 70-163 125-231 (331)
177 3ma5_A Tetratricopeptide repea 99.0 8.6E-10 3E-14 75.3 7.5 59 63-122 15-73 (100)
178 3n71_A Histone lysine methyltr 99.0 1.4E-09 4.8E-14 95.4 10.7 96 65-162 319-435 (490)
179 3qww_A SET and MYND domain-con 99.0 1.5E-09 5E-14 94.0 10.4 93 68-162 311-424 (433)
180 1klx_A Cysteine rich protein B 99.0 9.1E-09 3.1E-13 74.6 13.1 88 63-155 33-127 (138)
181 3ly7_A Transcriptional activat 99.0 5.2E-09 1.8E-13 89.2 13.5 92 69-162 213-347 (372)
182 3ro2_A PINS homolog, G-protein 99.0 6.2E-10 2.1E-14 87.0 7.2 89 64-154 192-292 (338)
183 3dss_A Geranylgeranyl transfer 99.0 8.5E-09 2.9E-13 86.5 14.6 92 71-164 90-184 (331)
184 2v5f_A Prolyl 4-hydroxylase su 99.0 5.3E-09 1.8E-13 72.6 11.1 74 89-164 5-85 (104)
185 1zu2_A Mitochondrial import re 99.0 1.3E-09 4.4E-14 82.8 8.5 60 70-130 61-131 (158)
186 4f3v_A ESX-1 secretion system 99.0 1.9E-09 6.4E-14 88.8 9.2 99 64-165 144-247 (282)
187 4a1s_A PINS, partner of inscut 99.0 4.2E-10 1.4E-14 92.3 5.1 93 63-157 231-335 (411)
188 3q15_A PSP28, response regulat 98.9 1.3E-09 4.4E-14 89.9 6.8 98 63-162 149-264 (378)
189 2kat_A Uncharacterized protein 98.9 3.9E-09 1.3E-13 72.7 8.2 71 63-134 27-99 (115)
190 3gw4_A Uncharacterized protein 98.9 7.6E-09 2.6E-13 76.5 10.1 91 66-159 3-103 (203)
191 3qwp_A SET and MYND domain-con 98.9 4.4E-09 1.5E-13 90.6 9.7 97 65-163 297-414 (429)
192 3q7a_A Farnesyltransferase alp 98.9 9.6E-09 3.3E-13 86.8 10.1 93 70-164 104-206 (349)
193 1hz4_A MALT regulatory protein 98.8 1.9E-08 6.6E-13 81.9 10.1 92 63-156 101-205 (373)
194 1hz4_A MALT regulatory protein 98.8 6.9E-09 2.3E-13 84.6 7.3 92 64-157 62-167 (373)
195 2v5f_A Prolyl 4-hydroxylase su 98.8 2.6E-08 8.9E-13 69.0 9.2 68 63-131 13-87 (104)
196 2xm6_A Protein corresponding t 98.8 2.8E-08 9.5E-13 84.8 11.3 90 70-164 346-445 (490)
197 3e4b_A ALGK; tetratricopeptide 98.8 2.6E-08 9E-13 85.2 9.4 93 64-162 185-286 (452)
198 1nzn_A CGI-135 protein, fissio 98.8 6.7E-08 2.3E-12 70.7 10.1 93 69-163 15-112 (126)
199 3e4b_A ALGK; tetratricopeptide 98.7 4.7E-08 1.6E-12 83.7 9.6 86 69-164 231-323 (452)
200 1klx_A Cysteine rich protein B 98.7 2.3E-07 7.7E-12 67.2 10.2 85 69-162 9-96 (138)
201 2xm6_A Protein corresponding t 98.6 3.3E-07 1.1E-11 78.1 12.4 80 69-154 273-360 (490)
202 3bee_A Putative YFRE protein; 98.6 1.4E-07 4.7E-12 64.8 8.0 54 71-125 25-78 (93)
203 4f3v_A ESX-1 secretion system 98.6 2.8E-08 9.6E-13 81.7 4.2 90 63-155 110-201 (282)
204 3n71_A Histone lysine methyltr 98.6 7.7E-08 2.6E-12 84.4 7.1 91 63-155 359-465 (490)
205 3mv2_B Coatomer subunit epsilo 98.4 5.5E-07 1.9E-11 74.9 8.2 98 63-165 144-261 (310)
206 3mv2_B Coatomer subunit epsilo 98.4 7.8E-07 2.7E-11 74.0 8.7 93 63-157 108-210 (310)
207 4e6h_A MRNA 3'-END-processing 98.4 2.2E-06 7.5E-11 77.9 11.1 81 72-154 326-407 (679)
208 3u64_A Protein TP_0956; tetrat 98.3 4.5E-06 1.5E-10 69.1 10.4 78 84-162 147-242 (301)
209 1pc2_A Mitochondria fission pr 98.3 1.7E-06 5.8E-11 65.1 7.2 63 70-133 50-114 (152)
210 4b4t_Q 26S proteasome regulato 98.3 5.1E-06 1.7E-10 68.4 10.5 91 64-156 104-206 (434)
211 1y8m_A FIS1; mitochondria, unk 98.2 4.6E-05 1.6E-09 56.7 13.1 91 70-163 21-115 (144)
212 3o48_A Mitochondria fission 1 98.2 1.9E-05 6.4E-10 58.2 10.1 90 70-162 22-115 (134)
213 4e6h_A MRNA 3'-END-processing 98.2 1.7E-05 5.7E-10 72.2 11.9 93 71-165 48-145 (679)
214 4b4t_Q 26S proteasome regulato 98.0 1E-05 3.5E-10 66.6 7.1 90 63-154 143-245 (434)
215 1xi4_A Clathrin heavy chain; a 98.0 2.4E-05 8.1E-10 76.4 10.0 65 86-157 1102-1166(1630)
216 4h7y_A Dual specificity protei 97.9 9.3E-05 3.2E-09 55.8 9.9 88 72-162 36-131 (161)
217 3ffl_A Anaphase-promoting comp 97.9 2.7E-05 9.3E-10 59.3 6.8 100 65-166 30-165 (167)
218 1xi4_A Clathrin heavy chain; a 97.9 3.9E-05 1.3E-09 74.8 9.4 91 62-162 1202-1317(1630)
219 1b89_A Protein (clathrin heavy 97.9 3.2E-05 1.1E-09 67.3 8.0 88 63-162 130-244 (449)
220 3qww_A SET and MYND domain-con 97.9 3.1E-05 1.1E-09 66.8 7.9 68 62-130 347-427 (433)
221 3ly7_A Transcriptional activat 97.8 5.5E-05 1.9E-09 64.3 8.1 59 66-126 288-346 (372)
222 2uy1_A Cleavage stimulation fa 97.8 0.00021 7.3E-09 62.1 11.6 58 71-130 195-252 (493)
223 2uy1_A Cleavage stimulation fa 97.8 0.00028 9.5E-09 61.3 12.2 98 63-165 221-360 (493)
224 3qwp_A SET and MYND domain-con 97.7 3E-05 1E-09 66.6 5.6 66 63-129 337-415 (429)
225 1nzn_A CGI-135 protein, fissio 97.5 0.00017 5.8E-09 52.5 6.1 64 69-133 52-117 (126)
226 1zbp_A Hypothetical protein VP 97.5 0.0018 6.1E-08 52.8 12.3 92 65-158 7-133 (273)
227 3o48_A Mitochondria fission 1 97.4 0.00064 2.2E-08 49.9 7.4 64 69-133 57-121 (134)
228 1b89_A Protein (clathrin heavy 97.4 3E-05 1E-09 67.4 0.2 89 63-152 215-309 (449)
229 1y8m_A FIS1; mitochondria, unk 97.3 0.001 3.5E-08 49.4 8.2 64 69-133 56-120 (144)
230 4h7y_A Dual specificity protei 97.3 0.0006 2E-08 51.4 6.4 79 83-164 7-99 (161)
231 4gns_B Protein CSD3, chitin bi 96.8 0.0052 1.8E-07 56.6 9.2 59 91-151 339-397 (754)
232 1ya0_A SMG-7 transcript varian 96.7 0.0072 2.4E-07 53.1 9.6 71 93-165 156-226 (497)
233 2ff4_A Probable regulatory pro 96.7 0.024 8.4E-07 47.6 12.3 83 69-153 129-233 (388)
234 1zbp_A Hypothetical protein VP 96.6 0.0066 2.2E-07 49.5 7.9 59 102-161 9-67 (273)
235 4g26_A Pentatricopeptide repea 96.6 0.031 1.1E-06 48.5 12.7 83 69-153 84-168 (501)
236 3ffl_A Anaphase-promoting comp 96.4 0.006 2.1E-07 46.3 5.9 57 96-154 27-92 (167)
237 4g26_A Pentatricopeptide repea 96.0 0.089 3.1E-06 45.6 11.9 93 64-159 114-211 (501)
238 1ya0_A SMG-7 transcript varian 95.9 0.023 7.9E-07 49.8 8.1 68 68-136 165-232 (497)
239 3mkq_A Coatomer beta'-subunit; 95.0 0.11 3.8E-06 45.7 9.4 65 85-150 677-761 (814)
240 4gns_B Protein CSD3, chitin bi 94.1 0.21 7.3E-06 45.9 9.1 94 71-165 265-377 (754)
241 3kae_A CDC27, possible protein 94.1 0.72 2.4E-05 35.7 10.5 73 87-161 60-150 (242)
242 3kae_A CDC27, possible protein 93.7 1.7 5.7E-05 33.6 12.0 59 65-124 72-148 (242)
243 2ff4_A Probable regulatory pro 93.4 0.23 8E-06 41.6 7.6 54 64-118 180-233 (388)
244 3txn_A 26S proteasome regulato 93.4 0.52 1.8E-05 40.0 9.7 90 63-154 107-210 (394)
245 3mkq_B Coatomer subunit alpha; 93.3 1.1 3.8E-05 34.0 10.5 48 63-116 13-60 (177)
246 4b4t_R RPN7, 26S proteasome re 92.9 0.26 8.9E-06 41.8 7.1 90 63-154 139-237 (429)
247 3spa_A Mtrpol, DNA-directed RN 92.4 2.8 9.7E-05 40.1 13.9 89 64-155 136-231 (1134)
248 4b4t_P 26S proteasome regulato 91.5 2.2 7.6E-05 36.3 11.4 90 63-154 145-247 (445)
249 3mkq_B Coatomer subunit alpha; 91.3 1.2 4E-05 33.8 8.4 55 87-151 6-60 (177)
250 2o8p_A 14-3-3 domain containin 90.7 1.8 6.1E-05 34.1 9.2 50 69-118 139-196 (227)
251 3esl_A Checkpoint serine/threo 90.5 3.1 0.00011 32.2 10.2 79 76-157 58-147 (202)
252 4b4t_S RPN3, 26S proteasome re 89.8 0.45 1.5E-05 42.0 5.5 65 90-158 232-303 (523)
253 2br9_A 14-3-3E, 14-3-3 protein 89.5 1 3.5E-05 35.6 6.9 47 72-118 147-201 (234)
254 3mkq_A Coatomer beta'-subunit; 89.2 1.2 4.2E-05 39.1 8.0 43 103-151 665-707 (814)
255 3iqu_A 14-3-3 protein sigma; s 89.0 1.2 3.9E-05 35.4 6.9 47 71-117 149-203 (236)
256 1wy6_A Hypothetical protein ST 88.8 3.5 0.00012 30.7 8.9 81 69-155 75-155 (172)
257 2npm_A 14-3-3 domain containin 88.7 1.2 4.2E-05 35.8 6.9 48 71-118 172-226 (260)
258 3uzd_A 14-3-3 protein gamma; s 88.7 1.3 4.3E-05 35.5 6.9 48 71-118 147-202 (248)
259 1o9d_A 14-3-3-like protein C; 88.4 1.3 4.5E-05 35.6 6.9 48 71-118 151-206 (260)
260 1qsa_A Protein (soluble lytic 88.2 2.8 9.5E-05 37.5 9.6 80 71-153 268-347 (618)
261 2v6y_A AAA family ATPase, P60 88.2 0.74 2.5E-05 30.5 4.5 18 101-118 22-39 (83)
262 2w2u_A Hypothetical P60 katani 87.7 0.82 2.8E-05 30.3 4.5 17 102-118 31-47 (83)
263 3ubw_A 14-3-3E, 14-3-3 protein 87.3 1.7 5.8E-05 35.0 6.9 47 72-118 173-227 (261)
264 3efz_A 14-3-3 protein; 14-3-3, 84.6 1.6 5.3E-05 35.4 5.5 49 71-119 168-226 (268)
265 2o8p_A 14-3-3 domain containin 84.1 4.5 0.00015 31.8 7.8 52 103-154 138-197 (227)
266 1wfd_A Hypothetical protein 15 83.3 1.7 6E-05 29.2 4.5 35 69-119 10-44 (93)
267 2cpt_A SKD1 protein, vacuolar 83.1 1.5 5.2E-05 30.9 4.3 34 70-119 14-47 (117)
268 3txn_A 26S proteasome regulato 83.0 5.6 0.00019 33.6 8.5 92 71-164 75-181 (394)
269 4fhn_B Nucleoporin NUP120; pro 82.5 1.9 6.6E-05 40.9 6.0 85 63-149 850-962 (1139)
270 4fhn_B Nucleoporin NUP120; pro 82.1 6.4 0.00022 37.3 9.4 78 80-159 833-934 (1139)
271 2wvi_A Mitotic checkpoint seri 81.5 8.1 0.00028 28.8 8.0 49 109-158 79-129 (164)
272 2br9_A 14-3-3E, 14-3-3 protein 81.3 4.9 0.00017 31.7 7.1 48 106-153 146-201 (234)
273 4a1g_A Mitotic checkpoint seri 81.0 7 0.00024 28.8 7.4 52 108-160 83-136 (152)
274 2v6x_A Vacuolar protein sortin 80.8 2.5 8.6E-05 27.7 4.5 34 70-119 9-42 (85)
275 4b4t_R RPN7, 26S proteasome re 80.5 2 6.8E-05 36.3 4.9 64 89-154 131-197 (429)
276 3iqu_A 14-3-3 protein sigma; s 80.4 5.3 0.00018 31.6 7.0 48 106-153 149-204 (236)
277 2npm_A 14-3-3 domain containin 80.0 5.5 0.00019 31.9 7.1 48 106-153 172-226 (260)
278 4a5x_A MITD1, MIT domain-conta 79.9 3.4 0.00012 27.4 4.9 19 101-119 27-45 (86)
279 3uzd_A 14-3-3 protein gamma; s 79.8 5.8 0.0002 31.6 7.1 48 106-153 147-202 (248)
280 1o9d_A 14-3-3-like protein C; 79.7 5.7 0.00019 31.8 7.1 48 106-153 151-206 (260)
281 4aez_C MAD3, mitotic spindle c 79.2 12 0.00043 29.2 8.7 50 107-157 131-182 (223)
282 1wfd_A Hypothetical protein 15 78.2 6.2 0.00021 26.4 5.9 13 107-119 13-25 (93)
283 2v6y_A AAA family ATPase, P60 76.8 5.7 0.00019 26.0 5.3 45 71-124 8-52 (83)
284 1wy6_A Hypothetical protein ST 76.5 8.5 0.00029 28.6 6.5 53 66-119 102-154 (172)
285 4b4t_S RPN3, 26S proteasome re 75.9 2.2 7.6E-05 37.6 3.9 57 64-123 240-303 (523)
286 2w2u_A Hypothetical P60 katani 75.6 6.4 0.00022 25.9 5.3 46 70-124 15-60 (83)
287 3ax2_A Mitochondrial import re 74.7 8.4 0.00029 24.9 5.5 24 102-125 29-52 (73)
288 2ca5_A MXIH; transport protein 73.6 1.3 4.4E-05 29.7 1.3 48 86-133 6-53 (85)
289 4gq2_M Nucleoporin NUP120; bet 72.7 22 0.00076 33.1 10.0 80 79-160 830-933 (950)
290 3efz_A 14-3-3 protein; 14-3-3, 71.8 6.9 0.00024 31.5 5.5 49 106-154 168-226 (268)
291 3re2_A Predicted protein; meni 71.8 15 0.00052 31.3 7.7 46 108-154 275-325 (472)
292 3ubw_A 14-3-3E, 14-3-3 protein 71.0 6.1 0.00021 31.7 5.0 48 106-153 172-227 (261)
293 2cpt_A SKD1 protein, vacuolar 70.1 25 0.00084 24.5 9.4 13 108-120 43-55 (117)
294 4b4t_P 26S proteasome regulato 68.3 47 0.0016 27.9 10.4 71 93-165 141-220 (445)
295 2ca5_A MXIH; transport protein 67.5 6.5 0.00022 26.2 3.8 27 71-97 26-52 (85)
296 4gq4_A Menin; tumor suppressor 67.1 21 0.00071 30.9 7.7 64 88-153 261-331 (489)
297 3t5x_A PCI domain-containing p 67.0 9.9 0.00034 28.9 5.4 38 89-127 14-51 (203)
298 4a5x_A MITD1, MIT domain-conta 66.4 12 0.0004 24.7 5.0 46 70-124 12-57 (86)
299 3mv2_A Coatomer subunit alpha; 65.8 31 0.001 28.5 8.4 32 129-160 211-242 (325)
300 3t5v_B Nuclear mRNA export pro 65.4 26 0.00087 30.1 8.2 88 69-158 140-254 (455)
301 3mkr_B Coatomer subunit alpha; 65.4 48 0.0017 27.2 9.5 94 66-159 113-232 (320)
302 3spa_A Mtrpol, DNA-directed RN 65.2 35 0.0012 32.8 9.6 66 92-159 130-201 (1134)
303 3u84_A Menin; MLL, JUND, ledgf 64.3 25 0.00085 30.5 7.7 45 108-153 297-346 (550)
304 2dl1_A Spartin; SPG20, MIT, st 63.8 9.4 0.00032 26.9 4.2 17 102-118 34-50 (116)
305 3t5x_A PCI domain-containing p 63.4 22 0.00074 26.9 6.7 73 62-143 21-97 (203)
306 2v6x_A Vacuolar protein sortin 63.2 17 0.00057 23.5 5.3 13 107-119 11-23 (85)
307 2crb_A Nuclear receptor bindin 61.5 16 0.00054 24.9 4.9 23 94-117 20-42 (97)
308 2cfu_A SDSA1; SDS-hydrolase, l 61.3 19 0.00066 32.1 6.9 44 95-140 455-498 (658)
309 3ax2_A Mitochondrial import re 60.3 29 0.001 22.3 5.8 35 129-164 22-56 (73)
310 2wpv_A GET4, UPF0363 protein Y 58.7 49 0.0017 26.9 8.4 27 122-149 132-158 (312)
311 1om2_A Protein (mitochondrial 58.4 12 0.00041 25.4 3.9 34 93-127 24-57 (95)
312 3lew_A SUSD-like carbohydrate 58.2 37 0.0013 28.9 8.0 48 107-155 175-233 (495)
313 2ijq_A Hypothetical protein; s 58.1 53 0.0018 24.2 8.9 56 96-153 39-103 (161)
314 2g0u_A Type III secretion syst 57.9 11 0.00039 25.4 3.6 23 143-165 34-56 (92)
315 3t5v_B Nuclear mRNA export pro 57.0 19 0.00066 30.9 5.9 61 62-123 183-254 (455)
316 4gq2_M Nucleoporin NUP120; bet 54.9 26 0.00088 32.7 6.8 52 95-152 816-867 (950)
317 3esl_A Checkpoint serine/threo 53.4 60 0.0021 24.8 7.6 52 71-123 95-148 (202)
318 1qsa_A Protein (soluble lytic 53.2 19 0.00066 32.0 5.4 85 66-154 296-410 (618)
319 3kez_A Putative sugar binding 53.0 42 0.0014 28.2 7.4 47 107-154 171-225 (461)
320 3snx_A SUSD homolog, putative 52.3 7.6 0.00026 33.1 2.6 31 123-154 190-220 (460)
321 3myv_A SUSD superfamily protei 51.8 50 0.0017 27.7 7.7 48 106-154 164-219 (454)
322 2ijq_A Hypothetical protein; s 50.8 47 0.0016 24.5 6.4 57 63-119 40-104 (161)
323 3lpz_A GET4 (YOR164C homolog); 50.4 98 0.0034 25.5 9.0 26 122-148 134-159 (336)
324 2cr7_A Paired amphipathic heli 49.4 36 0.0012 22.0 5.0 60 69-128 8-67 (80)
325 2wpv_A GET4, UPF0363 protein Y 49.1 42 0.0015 27.3 6.5 66 87-153 132-216 (312)
326 1om2_A Protein (mitochondrial 47.6 62 0.0021 21.8 6.3 26 130-156 26-51 (95)
327 2d2s_A Exocyst complex compone 47.4 72 0.0025 24.7 7.4 85 64-153 27-119 (235)
328 2rpa_A Katanin P60 ATPase-cont 45.3 19 0.00066 23.4 3.1 16 138-153 25-40 (78)
329 3eab_A Spastin; spastin, MIT, 43.2 14 0.00048 24.8 2.2 15 104-118 33-47 (89)
330 3mcx_A SUSD superfamily protei 42.6 55 0.0019 27.6 6.5 49 106-155 176-232 (477)
331 3lpz_A GET4 (YOR164C homolog); 42.6 90 0.0031 25.7 7.6 65 87-152 134-214 (336)
332 4b4t_O 26S proteasome regulato 42.5 77 0.0026 26.2 7.3 52 101-153 87-155 (393)
333 3hdx_A SUSD homolog, SUSD supe 41.6 66 0.0023 27.1 6.8 30 124-154 197-226 (478)
334 2ymb_A MITD1, MIT domain-conta 41.2 5.6 0.00019 31.8 0.0 18 102-119 35-52 (257)
335 4aez_C MAD3, mitotic spindle c 41.1 72 0.0025 24.8 6.4 36 87-123 148-183 (223)
336 2g0u_A Type III secretion syst 40.9 70 0.0024 21.5 5.4 16 114-129 40-55 (92)
337 3bu8_A Telomeric repeat-bindin 40.9 1.3E+02 0.0044 23.6 7.7 66 71-136 88-160 (235)
338 4a1g_A Mitotic checkpoint seri 40.7 92 0.0031 22.6 6.6 38 87-125 99-136 (152)
339 4ah2_B HLA class II histocompa 36.3 7.2 0.00024 30.3 -0.1 17 22-38 10-26 (229)
340 3bqo_A Telomeric repeat-bindin 35.9 81 0.0028 24.3 5.8 33 101-133 128-160 (211)
341 3qnk_A Putative lipoprotein; a 35.2 85 0.0029 26.7 6.6 48 106-154 153-211 (517)
342 2crb_A Nuclear receptor bindin 35.0 76 0.0026 21.5 4.9 14 107-120 39-52 (97)
343 3lew_A SUSD-like carbohydrate 34.5 1.5E+02 0.0051 25.1 8.0 50 71-121 174-234 (495)
344 3myv_A SUSD superfamily protei 31.3 1.6E+02 0.0056 24.4 7.6 48 71-119 164-219 (454)
345 3umh_A Amyloid beta A4 protein 31.0 87 0.003 24.2 5.3 57 70-126 100-157 (211)
346 3i4g_A SUSD-like carbohydrate 31.0 1.1E+02 0.0039 26.1 6.7 47 107-154 168-227 (528)
347 3jq1_A SUSD superfamily protei 30.6 67 0.0023 27.2 5.1 47 106-153 154-208 (481)
348 3kez_A Putative sugar binding 30.4 1.6E+02 0.0056 24.5 7.5 48 71-119 170-225 (461)
349 2p58_C Putative type III secre 29.1 57 0.0019 22.7 3.5 73 69-150 21-94 (116)
350 2wvi_A Mitotic checkpoint seri 29.0 1.7E+02 0.0058 21.4 8.1 38 88-126 95-132 (164)
351 2cfu_A SDSA1; SDS-hydrolase, l 29.0 56 0.0019 29.1 4.5 38 63-100 457-494 (658)
352 2e2a_A Protein (enzyme IIA); h 28.8 67 0.0023 21.9 3.9 30 123-153 19-48 (105)
353 1wcr_A PTS system, N, N'-diace 28.7 67 0.0023 21.8 3.9 29 124-153 18-46 (103)
354 2czy_A Paired amphipathic heli 28.4 1.2E+02 0.0039 19.3 6.3 58 70-127 3-60 (77)
355 3o10_A Sacsin; all-helical dom 28.3 82 0.0028 22.2 4.5 43 68-119 3-45 (141)
356 2npu_A FKBP12-rapamycin comple 28.2 52 0.0018 23.3 3.3 13 105-117 89-101 (126)
357 4b4t_O 26S proteasome regulato 28.2 2.5E+02 0.0085 23.0 10.0 85 67-153 88-197 (393)
358 2yhe_A SEC-alkyl sulfatase; hy 34.1 12 0.00043 33.6 0.0 41 102-143 473-513 (668)
359 3n44_F E1 envelope glycoprotei 27.1 12 0.00042 31.8 -0.2 7 60-66 18-24 (473)
360 2dl1_A Spartin; SPG20, MIT, st 26.6 1.6E+02 0.0056 20.4 7.2 47 67-122 15-61 (116)
361 3k1s_A PTS system, cellobiose- 26.6 76 0.0026 21.8 3.9 22 130-152 28-49 (109)
362 2uwj_G Type III export protein 26.0 53 0.0018 22.8 2.9 73 69-150 20-93 (115)
363 3s6n_M SurviVal motor neuron p 25.9 90 0.0031 17.2 3.8 14 106-119 18-31 (37)
364 3l8r_A PTCA, putative PTS syst 25.9 79 0.0027 22.2 3.9 20 131-151 44-63 (120)
365 2cwy_A Hypothetical protein TT 25.8 1.4E+02 0.0049 19.5 6.3 53 97-153 9-67 (94)
366 3re2_A Predicted protein; meni 25.4 1.5E+02 0.0052 25.2 6.1 45 74-119 276-325 (472)
367 2vkj_A TM1634; membrane protei 24.8 1.5E+02 0.0052 20.0 4.9 36 122-159 51-86 (106)
368 3bu8_A Telomeric repeat-bindin 24.6 42 0.0014 26.3 2.5 37 64-100 123-159 (235)
369 3mcx_A SUSD superfamily protei 24.1 2.1E+02 0.0072 23.9 7.0 50 71-121 176-233 (477)
370 3u84_A Menin; MLL, JUND, ledgf 23.1 1.7E+02 0.006 25.3 6.1 56 74-130 298-364 (550)
371 3pmr_A Amyloid-like protein 1; 22.3 80 0.0028 24.5 3.6 54 70-123 107-161 (219)
372 4gq4_A Menin; tumor suppressor 22.2 1.9E+02 0.0063 25.0 6.1 57 73-130 282-349 (489)
373 1wgx_A KIAA1903 protein; MYB D 22.2 1.1E+02 0.0038 19.5 3.7 42 73-116 14-56 (73)
374 3n3k_B Ubiquitin; hydrolase, p 21.6 33 0.0011 21.2 1.2 17 9-27 58-74 (85)
375 3mzk_B Protein transport prote 21.6 1.6E+02 0.0056 25.0 5.8 47 111-158 337-392 (441)
376 3otn_A SUSD superfamily protei 20.8 94 0.0032 26.2 4.2 46 108-154 163-226 (482)
377 3bqo_A Telomeric repeat-bindin 20.7 61 0.0021 25.0 2.6 24 133-157 126-149 (211)
378 4aen_A HLA class II histocompa 20.6 21 0.00072 27.2 0.0 13 30-42 1-13 (207)
379 4abx_A DNA repair protein RECN 20.2 1.3E+02 0.0044 21.8 4.3 51 71-122 72-122 (175)
380 3jys_A SUSD superfamily protei 20.2 1.3E+02 0.0045 25.5 5.0 46 107-153 162-222 (499)
381 4acq_A Alpha-2-macroglobulin; 20.1 6.2E+02 0.021 24.8 10.9 48 106-154 1098-1150(1451)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.86 E-value=1.1e-20 Score=136.34 Aligned_cols=102 Identities=17% Similarity=0.141 Sum_probs=97.5
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDA 141 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~ 141 (167)
|+.|++++++++|+.+|+++|+++|+++.+++++|.++. ..+++++|+..|++||+++|+++.++.++|.++.. ++++
T Consensus 20 G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~~ 97 (126)
T 4gco_A 20 GNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLT-KLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA-MREW 97 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHH-hhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH-CCCH
Confidence 467899999999999999999999999999999999997 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 142 SRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 142 ~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
++|++.|++||+++|+++.++.++
T Consensus 98 ~~A~~~~~~al~l~P~~~~a~~~l 121 (126)
T 4gco_A 98 SKAQRAYEDALQVDPSNEEAREGV 121 (126)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCCHHHHHHH
Confidence 999999999999999999887654
No 2
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.80 E-value=4.6e-19 Score=130.80 Aligned_cols=99 Identities=14% Similarity=0.143 Sum_probs=91.5
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDA 141 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~ 141 (167)
+.+|+..+++++|+.+|+++|+++|+++.+|+++|.++. ..+++++|+.+|++|++++|+++.++.++|.++.. ++++
T Consensus 38 a~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~~~ 115 (150)
T 4ga2_A 38 AKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYE-LEENTDKAVECYRRSVELNPTQKDLVLKIAELLCK-NDVT 115 (150)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HCSS
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCh
Confidence 357889999999999999999999999999999999987 89999999999999999999999999999999999 9998
Q ss_pred HHHHHH-HHHHHHhCCCCHHHH
Q 046296 142 SRAESY-FDQAVKSAPDDWLNL 162 (167)
Q Consensus 142 ~eA~~~-~e~Al~l~P~~~~~l 162 (167)
++|... +++|++++|+++.++
T Consensus 116 ~~aa~~~~~~al~l~P~~~~~~ 137 (150)
T 4ga2_A 116 DGRAKYWVERAAKLFPGSPAVY 137 (150)
T ss_dssp SSHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHHHhCcCCHHHH
Confidence 876655 699999999999775
No 3
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.79 E-value=7.9e-19 Score=131.54 Aligned_cols=95 Identities=13% Similarity=0.097 Sum_probs=91.5
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|++.+++++|+.+|+++++++|+++.+|+++|.++. ..+++++|+.+|++|++++|+++.+++++|.++.. +|+++
T Consensus 44 ~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~-lg~~~ 121 (151)
T 3gyz_A 44 YDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQ-IKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLR-LKAPL 121 (151)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHH-cCCHH
Confidence 46778899999999999999999999999999999997 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCH
Q 046296 143 RAESYFDQAVKSAPDDW 159 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~ 159 (167)
+|+.+|++|+++.|+.+
T Consensus 122 eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 122 KAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHHHhCCCHH
Confidence 99999999999999876
No 4
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.78 E-value=4.6e-18 Score=120.00 Aligned_cols=100 Identities=18% Similarity=0.025 Sum_probs=94.7
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|+..+++++|+.+|+++++++|+++.++.++|.++. ..+++++|+..|++|++++|+++.++..+|.++.. +++++
T Consensus 12 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~~~~~ 89 (126)
T 3upv_A 12 KEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALA-KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA-VKEYA 89 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-HhCHH
Confidence 56788999999999999999999999999999999987 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhC------CCCHHHHHh
Q 046296 143 RAESYFDQAVKSA------PDDWLNLIK 164 (167)
Q Consensus 143 eA~~~~e~Al~l~------P~~~~~l~~ 164 (167)
+|+.+|+++++++ |+++.++..
T Consensus 90 ~A~~~~~~al~~~p~~~~~p~~~~~~~~ 117 (126)
T 3upv_A 90 SALETLDAARTKDAEVNNGSSAREIDQL 117 (126)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTHHHHHHH
T ss_pred HHHHHHHHHHHhCcccCCchhHHHHHHH
Confidence 9999999999999 988876644
No 5
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.76 E-value=6.9e-19 Score=129.86 Aligned_cols=101 Identities=10% Similarity=0.055 Sum_probs=94.5
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|.+++++++|+..|++++..+|+++.+++++|.++. ..+++++|+++|++||+++|+++.++.++|.++.. +++++
T Consensus 5 ~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~-~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~~~ 82 (150)
T 4ga2_A 5 SMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYY-EAKEYDLAKKYICTYINVQERDPKAHRFLGLLYEL-EENTD 82 (150)
T ss_dssp --CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCchH
Confidence 56778899999999999999999999999999999987 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHhc
Q 046296 143 RAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
+|+.+|++|++++|+++.++.++
T Consensus 83 ~A~~~~~~al~~~p~~~~~~~~l 105 (150)
T 4ga2_A 83 KAVECYRRSVELNPTQKDLVLKI 105 (150)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHH
Confidence 99999999999999999877553
No 6
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.76 E-value=7.4e-18 Score=124.43 Aligned_cols=98 Identities=16% Similarity=0.167 Sum_probs=93.4
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|+..+++++|+.+|+++|+++|+++.++++++.++. ..+++++|+.+|++||+++|+++.+++++|.+++. +++++
T Consensus 19 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~ 96 (164)
T 3sz7_A 19 NAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYS-ASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFD-MADYK 96 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-ccCHH
Confidence 56788999999999999999999999999999999987 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHH
Q 046296 143 RAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l 162 (167)
+|+.+|+++++++|+++.++
T Consensus 97 ~A~~~~~~al~~~p~~~~~~ 116 (164)
T 3sz7_A 97 GAKEAYEKGIEAEGNGGSDA 116 (164)
T ss_dssp HHHHHHHHHHHHHSSSCCHH
T ss_pred HHHHHHHHHHHhCCCchHHH
Confidence 99999999999999987644
No 7
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.76 E-value=5e-18 Score=121.32 Aligned_cols=96 Identities=11% Similarity=-0.072 Sum_probs=86.0
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..+.+.+++++|+..|+++++++|+++.+|+.+|.++. ..+++++|+.+|++|++++|+++.++..+|.++.. .++++
T Consensus 25 ~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~-~g~~~ 102 (121)
T 1hxi_A 25 LSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQA-ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN-EHNAN 102 (121)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHH
Confidence 46778899999999999999999999999999999987 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCHH
Q 046296 143 RAESYFDQAVKSAPDDWL 160 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~ 160 (167)
+|+.+|+++++++|+++.
T Consensus 103 ~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 103 AALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHhCcCCCC
Confidence 999999999999998754
No 8
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.75 E-value=1.1e-17 Score=123.53 Aligned_cols=97 Identities=8% Similarity=-0.054 Sum_probs=92.1
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|...+++++|+.+|+++++++|+++.+|++++.++. ..+++++|+.+|++|++++|+++.+++++|.++.. +|+++
T Consensus 29 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~~~ 106 (148)
T 2vgx_A 29 FNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQ-AMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQ-XGELA 106 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH-cCCHH
Confidence 46778899999999999999999999999999999987 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCHHH
Q 046296 143 RAESYFDQAVKSAPDDWLN 161 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~ 161 (167)
+|+.+|+++++++|+++..
T Consensus 107 ~A~~~~~~al~~~p~~~~~ 125 (148)
T 2vgx_A 107 EAESGLFLAQELIANXPEF 125 (148)
T ss_dssp HHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHHHCcCCCcc
Confidence 9999999999999987643
No 9
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.75 E-value=8.3e-18 Score=122.02 Aligned_cols=97 Identities=13% Similarity=-0.030 Sum_probs=92.1
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..++..+++++|+.+|+++++++|+++.+|++++.++. ..+++++|+.+|++|++++|+++.+++++|.++.. +|+++
T Consensus 26 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~ 103 (142)
T 2xcb_A 26 FNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQ-SLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ-LGDLD 103 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH-cCCHH
Confidence 46778899999999999999999999999999999987 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCHHH
Q 046296 143 RAESYFDQAVKSAPDDWLN 161 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~ 161 (167)
+|+.+|+++++++|+++..
T Consensus 104 ~A~~~~~~al~~~p~~~~~ 122 (142)
T 2xcb_A 104 GAESGFYSARALAAAQPAH 122 (142)
T ss_dssp HHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHHHHHHHhCCCCcch
Confidence 9999999999999988643
No 10
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.75 E-value=1.3e-17 Score=119.91 Aligned_cols=98 Identities=18% Similarity=0.228 Sum_probs=89.4
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHH
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDG-------NILSLYADLI 134 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~-------~al~~lA~~l 134 (167)
|+.|++++++++|+.+|++||+++|+++.+++++|.++. .++++++|+..|++||+++|++. .++.++|.++
T Consensus 15 G~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~ 93 (127)
T 4gcn_A 15 GNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYF-EEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAF 93 (127)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHH-HhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHH
Confidence 357889999999999999999999999999999999987 89999999999999999998763 5788899999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 135 WQAHKDASRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 135 ~~~~g~~~eA~~~~e~Al~l~P~~~~~l 162 (167)
.. ++++++|+++|+++|++.|+ +.++
T Consensus 94 ~~-~~~~~~A~~~~~kal~~~~~-~~~~ 119 (127)
T 4gcn_A 94 QK-QNDLSLAVQWFHRSLSEFRD-PELV 119 (127)
T ss_dssp HH-TTCHHHHHHHHHHHHHHSCC-HHHH
T ss_pred HH-cCCHHHHHHHHHHHHhhCcC-HHHH
Confidence 99 99999999999999999885 5444
No 11
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.74 E-value=1.6e-17 Score=128.08 Aligned_cols=101 Identities=14% Similarity=0.108 Sum_probs=95.1
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHH----------------HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGN----------------YARFLKEVRGDFAKAEELCGRAILANPGDGNI 126 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~----------------lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~a 126 (167)
..++..+++++|+.+|+++++++|+++.+++. +|.++. ..+++++|+.+|+++|+++|+++.+
T Consensus 12 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~ 90 (208)
T 3urz_A 12 SAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYK-KNRNYDKAYLFYKELLQKAPNNVDC 90 (208)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHCCCCHHH
Confidence 45678899999999999999999999999999 999987 8999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 127 LSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 127 l~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
+.++|.+++. ++++++|+.+|+++++++|+++.++.++
T Consensus 91 ~~~lg~~~~~-~g~~~~A~~~~~~al~~~P~~~~a~~~l 128 (208)
T 3urz_A 91 LEACAEMQVC-RGQEKDALRMYEKILQLEADNLAANIFL 128 (208)
T ss_dssp HHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 9999999999 9999999999999999999999877543
No 12
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.73 E-value=1.4e-16 Score=108.34 Aligned_cols=101 Identities=18% Similarity=0.126 Sum_probs=95.1
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|...+++++|+.+|+++++.+|+++.++.+++.++. ..+++++|+.+++++++++|+++.++..+|.++.. .++++
T Consensus 12 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~ 89 (118)
T 1elw_A 12 NKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYA-KKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEF-LNRFE 89 (118)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-hhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-HhhHH
Confidence 46778899999999999999999999999999999987 79999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHhc
Q 046296 143 RAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
+|+.+|+++++++|+++.++..+
T Consensus 90 ~A~~~~~~~~~~~~~~~~~~~~l 112 (118)
T 1elw_A 90 EAKRTYEEGLKHEANNPQLKEGL 112 (118)
T ss_dssp HHHHHHHHHHTTCTTCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHH
Confidence 99999999999999999877543
No 13
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.73 E-value=3.1e-17 Score=120.81 Aligned_cols=97 Identities=14% Similarity=0.059 Sum_probs=92.0
Q ss_pred cchhhcCCChHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEA------------------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGD 123 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l------------------~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~ 123 (167)
+..|++++++++|+.+|+++|++ +|.++.+++++|.++. ..+++++|+.+|++||+++|++
T Consensus 18 G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~~~~~~A~~~~~~al~~~p~~ 96 (162)
T 3rkv_A 18 GNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYL-NIGDLHEAEETSSEVLKREETN 96 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHhcCCcc
Confidence 35788899999999999999999 7788899999999987 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 046296 124 GNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWL 160 (167)
Q Consensus 124 ~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~ 160 (167)
+.+++.+|.+++. ++++++|+.+|++|++++|+++.
T Consensus 97 ~~a~~~~g~~~~~-~g~~~~A~~~~~~al~l~p~~~~ 132 (162)
T 3rkv_A 97 EKALFRRAKARIA-AWKLDEAEEDLKLLLRNHPAAAS 132 (162)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCGGGHH
T ss_pred hHHHHHHHHHHHH-HhcHHHHHHHHHHHHhcCCCCHH
Confidence 9999999999999 99999999999999999999983
No 14
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.71 E-value=6.9e-17 Score=125.23 Aligned_cols=100 Identities=14% Similarity=-0.045 Sum_probs=95.0
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc----
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAH---- 138 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~---- 138 (167)
.++.+.+++++|+..|+++|+++|+++.++++++.++. ..+++++|+.+|+++++++|+++.++.++|.++.. +
T Consensus 13 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~~~~~ 90 (217)
T 2pl2_A 13 VQLYALGRYDAALTLFERALKENPQDPEALYWLARTQL-KLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVA-LYRQA 90 (217)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHTC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-hhhhh
Confidence 46778899999999999999999999999999999987 89999999999999999999999999999999999 9
Q ss_pred -------CCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 139 -------KDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 139 -------g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+++++|+..|+++++++|+++.++.+
T Consensus 91 ~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~ 123 (217)
T 2pl2_A 91 EDRERGKGYLEQALSVLKDAERVNPRYAPLHLQ 123 (217)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhhcccccCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 99999999999999999999977654
No 15
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.71 E-value=1.2e-16 Score=113.03 Aligned_cols=93 Identities=16% Similarity=0.044 Sum_probs=89.7
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|+..+++++|+.+|+++++++|+++.++++++.++. ..+++++|+.+|+++++++|+++.++..+|.+++. +++++
T Consensus 17 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~~ 94 (137)
T 3q49_B 17 NRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE-MESYD 94 (137)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH-HhhHH
Confidence 46788899999999999999999999999999999987 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCC
Q 046296 143 RAESYFDQAVKSAPD 157 (167)
Q Consensus 143 eA~~~~e~Al~l~P~ 157 (167)
+|+.+|+++++++|+
T Consensus 95 ~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 95 EAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHChh
Confidence 999999999999997
No 16
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.71 E-value=4.7e-16 Score=107.22 Aligned_cols=100 Identities=23% Similarity=0.265 Sum_probs=94.3
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|...+++++|+.+|+++++.+|+++.++..++.++. ..+++++|+.+++++++++|+++.++..+|.++.. .++++
T Consensus 20 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 97 (131)
T 2vyi_A 20 NEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYS-KLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSS-LNKHV 97 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHH-hCCHH
Confidence 46778899999999999999999999999999999987 79999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHh
Q 046296 143 RAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+|+.+|+++++++|+++.++..
T Consensus 98 ~A~~~~~~~~~~~p~~~~~~~~ 119 (131)
T 2vyi_A 98 EAVAYYKKALELDPDNETYKSN 119 (131)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHhcCccchHHHHH
Confidence 9999999999999999876644
No 17
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.70 E-value=1.3e-16 Score=145.92 Aligned_cols=100 Identities=18% Similarity=0.134 Sum_probs=69.3
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|.+++++++|+.+|++||+++|+++.+++++|.++. .++++++|+++|++||+++|+++.++.++|.++.. +++++
T Consensus 17 ~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~-~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~-~g~~~ 94 (723)
T 4gyw_A 17 NIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQ-QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKE-MQDVQ 94 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHH
Confidence 45666677777777777777777777777777776665 56777777777777777777777777777777766 77777
Q ss_pred HHHHHHHHHHHhCCCCHHHHHh
Q 046296 143 RAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+|+++|++||+++|+++.++.+
T Consensus 95 ~A~~~~~kAl~l~P~~~~a~~~ 116 (723)
T 4gyw_A 95 GALQCYTRAIQINPAFADAHSN 116 (723)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHH
Confidence 7777777777777776665544
No 18
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.70 E-value=1.2e-16 Score=111.24 Aligned_cols=100 Identities=18% Similarity=0.065 Sum_probs=93.8
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|...+++++|+.+|+++++++|+++.++.+++.++. ..+++++|+.+|+++++++|+++.++..+|.++.. +++++
T Consensus 24 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~ 101 (133)
T 2lni_A 24 NECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYT-KLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEA-MKDYT 101 (133)
T ss_dssp HHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHT-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-HhhHH
Confidence 46778899999999999999999999999999999886 79999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHh
Q 046296 143 RAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+|+++|+++++++|+++.++..
T Consensus 102 ~A~~~~~~~~~~~p~~~~~~~~ 123 (133)
T 2lni_A 102 KAMDVYQKALDLDSSCKEAADG 123 (133)
T ss_dssp HHHHHHHHHHHHCGGGTHHHHH
T ss_pred HHHHHHHHHHHhCCCchHHHHH
Confidence 9999999999999998766543
No 19
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=3.5e-16 Score=111.01 Aligned_cols=101 Identities=18% Similarity=0.069 Sum_probs=94.4
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANPGN---ALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAH 138 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P~n---~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~ 138 (167)
+..|+..+++++|+.+|+++++++|++ +.++.+++.++. ..+++++|+.+|+++++++|+++.++..+|.+++. +
T Consensus 35 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~ 112 (148)
T 2dba_A 35 GNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHL-KLEDYDKAETEASKAIEKDGGDVKALYRRSQALEK-L 112 (148)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH-H
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHH-c
Confidence 346678899999999999999999998 899999999886 89999999999999999999999999999999999 9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 139 KDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 139 g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+++++|+.+|+++++++|+++.++..
T Consensus 113 ~~~~~A~~~~~~al~~~p~~~~~~~~ 138 (148)
T 2dba_A 113 GRLDQAVLDLQRCVSLEPKNKVFQEA 138 (148)
T ss_dssp TCHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCcHHHHHH
Confidence 99999999999999999999877654
No 20
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.70 E-value=3.1e-17 Score=115.29 Aligned_cols=93 Identities=15% Similarity=0.162 Sum_probs=85.6
Q ss_pred CCChHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHH
Q 046296 68 NHGSSSTDAYNEKMIEA---NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRA 144 (167)
Q Consensus 68 ~g~~d~A~~~~~kAL~l---~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA 144 (167)
.+++++|+.+|+++|++ +|+++.++++++.++. ..+++++|+.+|+++++++|+++.++.++|.++.. ++++++|
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A 80 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFR-TLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYN-LGRYEQG 80 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-cCCHHHH
Confidence 57899999999999999 6999999999999987 89999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHhCCCCHHHH
Q 046296 145 ESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 145 ~~~~e~Al~l~P~~~~~l 162 (167)
+.+|++++++.|+++.+.
T Consensus 81 ~~~~~~al~~~p~~~~~~ 98 (117)
T 3k9i_A 81 VELLLKIIAETSDDETIQ 98 (117)
T ss_dssp HHHHHHHHHHHCCCHHHH
T ss_pred HHHHHHHHHhCCCcHHHH
Confidence 999999999999998765
No 21
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.69 E-value=1.2e-16 Score=121.85 Aligned_cols=95 Identities=19% Similarity=0.150 Sum_probs=86.3
Q ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 046296 68 NHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGD----------FAKAEELCGRAILANPGDGNILSLYADLIWQA 137 (167)
Q Consensus 68 ~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd----------~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~ 137 (167)
...+++|+..|+++++++|+++.+|++++.++. ..++ +++|+..|++||+++|+++.+++++|.+|..
T Consensus 15 ~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~-~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~- 92 (158)
T 1zu2_A 15 ILLFEQIRQDAENTYKSNPLDADNLTRWGGVLL-ELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS- 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH-
Confidence 367999999999999999999999999999886 5554 5699999999999999999999999999998
Q ss_pred cC-----------CHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 138 HK-----------DASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 138 ~g-----------~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
++ ++++|+++|++||+++|++..+..+
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~a 130 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKS 130 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 64 8999999999999999999876644
No 22
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.69 E-value=7.6e-16 Score=111.26 Aligned_cols=99 Identities=19% Similarity=0.054 Sum_probs=94.0
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|...+++++|+.+|+++++++|.++.++.+++.++. ..+++++|+.+|+++++++|+++.++..+|.++.. +++++
T Consensus 21 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~ 98 (166)
T 1a17_A 21 NDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGKFR 98 (166)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-hccHH
Confidence 46778899999999999999999999999999999987 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHHH
Q 046296 143 RAESYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~ 163 (167)
+|+.+|+++++++|+++.++.
T Consensus 99 ~A~~~~~~a~~~~p~~~~~~~ 119 (166)
T 1a17_A 99 AALRDYETVVKVKPHDKDAKM 119 (166)
T ss_dssp HHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHH
Confidence 999999999999999987663
No 23
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.69 E-value=1.1e-15 Score=104.49 Aligned_cols=101 Identities=20% Similarity=0.273 Sum_probs=94.8
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|...+++++|+.+|+++++.+|.++.++..++.++. ..+++++|+.+|+++++++|.++.++..++.+++. .++++
T Consensus 17 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~ 94 (125)
T 1na0_A 17 NAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYD 94 (125)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHH
Confidence 45778899999999999999999999999999999887 79999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHhc
Q 046296 143 RAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
+|+.+|+++++++|+++.++.++
T Consensus 95 ~A~~~~~~~~~~~~~~~~~~~~l 117 (125)
T 1na0_A 95 EAIEYYQKALELDPNNAEAKQNL 117 (125)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHH
Confidence 99999999999999998876543
No 24
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.69 E-value=2.6e-16 Score=117.04 Aligned_cols=96 Identities=15% Similarity=0.012 Sum_probs=86.7
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..+...++++.|+..++++++++|+++.++..++.++. ..+++++|+++|+++++++|+++.++.++|.++.. +++++
T Consensus 81 ~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~-~g~~~ 158 (184)
T 3vtx_A 81 SANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYD-SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG-KGLRD 158 (184)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH-CCCHH
Confidence 35667788999999999999999999999999999886 79999999999999999999999999999999998 99999
Q ss_pred HHHHHHHHHHHhCCCCHH
Q 046296 143 RAESYFDQAVKSAPDDWL 160 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~ 160 (167)
+|+++|++||+++|+++.
T Consensus 159 ~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 159 EAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHhCCccCHH
Confidence 999999999999998764
No 25
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.69 E-value=2.6e-16 Score=143.91 Aligned_cols=101 Identities=21% Similarity=0.100 Sum_probs=96.9
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|.+++++++|+.+|++||+++|+++.+++++|.++. .++++++|+++|++||+++|+++.++.++|.++.. +|+++
T Consensus 51 ~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~-~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~-~g~~~ 128 (723)
T 4gyw_A 51 SVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLK-EMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD-SGNIP 128 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHH
Confidence 57888999999999999999999999999999999997 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHhc
Q 046296 143 RAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
+|+++|++||+++|+++.++.++
T Consensus 129 eAi~~~~~Al~l~P~~~~a~~~L 151 (723)
T 4gyw_A 129 EAIASYRTALKLKPDFPDAYCNL 151 (723)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCChHHHhhh
Confidence 99999999999999999887664
No 26
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.69 E-value=8.8e-17 Score=122.62 Aligned_cols=96 Identities=14% Similarity=0.046 Sum_probs=89.7
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCC
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANPG-------NAL-----LLGNYARFLKEVRGDFAKAEELCGRAILA-------NPG 122 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P~-------n~~-----~l~~lA~~l~~~~gd~e~A~~~~~rAl~l-------~P~ 122 (167)
++.+++.+++++|+..|++||+++|+ +.. +|+|++.++. ..+++++|+.+|++||++ +|+
T Consensus 18 G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~-~Lgr~~eAl~~~~kAL~l~n~~~e~~pd 96 (159)
T 2hr2_A 18 AQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALA-GLRSFDEALHSADKALHYFNRRGELNQD 96 (159)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHCCTTST
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhhccccCCCc
Confidence 35677889999999999999999999 444 9999999997 899999999999999999 999
Q ss_pred CHHHH----HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 046296 123 DGNIL----SLYADLIWQAHKDASRAESYFDQAVKSAPDDW 159 (167)
Q Consensus 123 ~~~al----~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~ 159 (167)
++.+| +++|.++.. ++++++|+..|++||+++|++.
T Consensus 97 ~~~A~~~~~~~rG~aL~~-lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 97 EGKLWISAVYSRALALDG-LGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHhHHHHHHH-CCCHHHHHHHHHHHHhcCCCcH
Confidence 99999 999999999 9999999999999999999875
No 27
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.68 E-value=8.7e-16 Score=107.49 Aligned_cols=98 Identities=12% Similarity=0.010 Sum_probs=92.3
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILANPGD---GNILSLYADLIWQ 136 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~---~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~---~~al~~lA~~l~~ 136 (167)
..++..+++++|+..|+++++.+|+++ .+++.++.++. ..+++++|+.+|+++++.+|++ +.+++.+|.+++.
T Consensus 10 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~ 88 (129)
T 2xev_A 10 FDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYY-ATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYG 88 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH
Confidence 467788999999999999999999998 89999999987 8999999999999999999999 8999999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 137 AHKDASRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 137 ~~g~~~eA~~~~e~Al~l~P~~~~~l 162 (167)
++++++|+.+|+++++..|+++.+.
T Consensus 89 -~g~~~~A~~~~~~~~~~~p~~~~~~ 113 (129)
T 2xev_A 89 -EGKNTEAQQTLQQVATQYPGSDAAR 113 (129)
T ss_dssp -TTCHHHHHHHHHHHHHHSTTSHHHH
T ss_pred -cCCHHHHHHHHHHHHHHCCCChHHH
Confidence 9999999999999999999998654
No 28
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.68 E-value=5.8e-16 Score=119.99 Aligned_cols=96 Identities=11% Similarity=-0.066 Sum_probs=56.2
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVR-----------GDFAKAEELCGRAILANPGDGNILSLYAD 132 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~-----------gd~e~A~~~~~rAl~l~P~~~~al~~lA~ 132 (167)
+|.+.+++++|+.+|+++++++|+++.++++++.++. .. +++++|+..|++|++++|+++.++.++|.
T Consensus 48 ~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~-~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~ 126 (217)
T 2pl2_A 48 TQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYV-ALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGL 126 (217)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 3445556666666666666666666666666665554 45 56666666666666666666666655555
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 133 LIWQAHKDASRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 133 ~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l 162 (167)
++.. ++++++|++.|++|++++ +++.++
T Consensus 127 ~~~~-~g~~~~A~~~~~~al~~~-~~~~~~ 154 (217)
T 2pl2_A 127 VYAL-LGERDKAEASLKQALALE-DTPEIR 154 (217)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHC-CCHHHH
T ss_pred HHHH-cCChHHHHHHHHHHHhcc-cchHHH
Confidence 5555 555555555555555555 554443
No 29
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.68 E-value=5.2e-16 Score=104.75 Aligned_cols=95 Identities=13% Similarity=0.019 Sum_probs=90.4
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHc-C
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPG--DGNILSLYADLIWQAH-K 139 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~--~~~al~~lA~~l~~~~-g 139 (167)
.+|...+++++|+.+|+++++++|.++.++.+++.++. ..+++++|+.+|+++++++|+ ++.++..++.++.. . +
T Consensus 14 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~-~~~ 91 (112)
T 2kck_A 14 VLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALY-NLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRY-IEG 91 (112)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTT-CSS
T ss_pred HHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH-HhC
Confidence 46778899999999999999999999999999999987 899999999999999999999 99999999999999 9 9
Q ss_pred CHHHHHHHHHHHHHhCCCCH
Q 046296 140 DASRAESYFDQAVKSAPDDW 159 (167)
Q Consensus 140 ~~~eA~~~~e~Al~l~P~~~ 159 (167)
++++|+++|+++++..|+++
T Consensus 92 ~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 92 KEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp CSHHHHHHHHHHGGGCCCCC
T ss_pred CHHHHHHHHHHHhhcccCCC
Confidence 99999999999999999764
No 30
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.67 E-value=9.5e-16 Score=116.23 Aligned_cols=100 Identities=10% Similarity=-0.042 Sum_probs=94.4
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNA----------------LLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNI 126 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~----------------~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~a 126 (167)
..|+.++++++|+.+|++++++.|+++ .++.++|.++. ..+++++|+.+|+++++++|+++.+
T Consensus 46 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~ 124 (198)
T 2fbn_A 46 NEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYN-KNKDYPKAIDHASKVLKIDKNNVKA 124 (198)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCcccHHH
Confidence 567888999999999999999999998 89999999987 8999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 127 LSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 127 l~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
++.+|.+++. ++++++|+.+|+++++++|+++.++..
T Consensus 125 ~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~ 161 (198)
T 2fbn_A 125 LYKLGVANMY-FGFLEEAKENLYKAASLNPNNLDIRNS 161 (198)
T ss_dssp HHHHHHHHHH-HTCHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHH-cccHHHHHHHHHHHHHHCCCcHHHHHH
Confidence 9999999999 999999999999999999999877654
No 31
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.66 E-value=1.1e-15 Score=126.65 Aligned_cols=101 Identities=15% Similarity=0.046 Sum_probs=94.7
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGN---------------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNIL 127 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n---------------~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al 127 (167)
.+|++++++++|+.+|++||+++|++ +.+++++|.++. ..+++++|+.+|++||+++|+++.++
T Consensus 155 ~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~ 233 (336)
T 1p5q_A 155 TVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHL-KLQAFSAAIESCNKALELDSNNEKGL 233 (336)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 46778899999999999999999999 699999999987 89999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 128 SLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 128 ~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
+++|.+++. ++++++|+.+|++|++++|+++.++.++
T Consensus 234 ~~lg~~~~~-~g~~~~A~~~~~~al~l~P~~~~a~~~l 270 (336)
T 1p5q_A 234 SRRGEAHLA-VNDFELARADFQKVLQLYPNNKAAKTQL 270 (336)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred HHHHHHHHH-CCCHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 999999999 9999999999999999999998776543
No 32
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.66 E-value=2.6e-15 Score=111.54 Aligned_cols=100 Identities=13% Similarity=0.039 Sum_probs=72.9
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC----------------------------------HHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGD----------------------------------FAK 108 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd----------------------------------~e~ 108 (167)
.+|.+++++++|+.+|+++|+++|+++.++..+|.++. ..++ +++
T Consensus 13 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (184)
T 3vtx_A 13 DKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYM-DIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQA 91 (184)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHH
Confidence 56778899999999999999999999999998888775 4554 455
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 109 AEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 109 A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
|+..++++++++|+++.++..+|.++.. ++++++|+++|+++++++|+++.++.+
T Consensus 92 a~~~~~~a~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~~l~~~p~~~~~~~~ 146 (184)
T 3vtx_A 92 AIDALQRAIALNTVYADAYYKLGLVYDS-MGEHDKAIEAYEKTISIKPGFIRAYQS 146 (184)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHhCccchHHHHHHHHHHHH-hCCchhHHHHHHHHHHhcchhhhHHHH
Confidence 5555555556666666666666666666 777777777777777777777665543
No 33
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.65 E-value=2.3e-15 Score=115.64 Aligned_cols=98 Identities=11% Similarity=0.023 Sum_probs=93.0
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANP-GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKD 140 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P-~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~ 140 (167)
+..|+..+++++|+.+|+++++++| .++.+++++|.++. ..+++++|+.+|++|++++|+++.++..+|.++.. +++
T Consensus 14 g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~ 91 (228)
T 4i17_A 14 GNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCAD-NIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRD-MKN 91 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHH-HhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHH-ccc
Confidence 3567889999999999999999999 99999999999987 89999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHHhCCCCHHH
Q 046296 141 ASRAESYFDQAVKSAPDDWLN 161 (167)
Q Consensus 141 ~~eA~~~~e~Al~l~P~~~~~ 161 (167)
+++|+.+|+++++++|+++.+
T Consensus 92 ~~~A~~~~~~al~~~p~~~~~ 112 (228)
T 4i17_A 92 NQEYIATLTEGIKAVPGNATI 112 (228)
T ss_dssp HHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHHHHCCCcHHH
Confidence 999999999999999999844
No 34
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.65 E-value=8.9e-16 Score=130.52 Aligned_cols=101 Identities=12% Similarity=0.078 Sum_probs=90.2
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGD-FAKAEELCGRAILANPGDGNILSLYADLIWQAHKDA 141 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd-~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~ 141 (167)
.+|.+.+++++|+.+|+++|+++|+++.+|++++.++. ..++ +++|+.+|++||+++|+++.+|++++.++.. ++++
T Consensus 105 ~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~-~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~-~g~~ 182 (382)
T 2h6f_A 105 AVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLK-SLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEW-LRDP 182 (382)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCC
T ss_pred HHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHH-HcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-ccCH
Confidence 45666788999999999999999999999999999887 7886 9999999999999999999999999999998 9999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 142 SRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 142 ~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
++|+.+|++||+++|+++.++.++
T Consensus 183 ~eAl~~~~kal~ldP~~~~a~~~l 206 (382)
T 2h6f_A 183 SQELEFIADILNQDAKNYHAWQHR 206 (382)
T ss_dssp TTHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCccCHHHHHHH
Confidence 999999999999999998877543
No 35
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.64 E-value=5.1e-17 Score=121.61 Aligned_cols=94 Identities=11% Similarity=0.038 Sum_probs=85.7
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFD 149 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e 149 (167)
++-.+-..|+++++++|+++.+++++|.++. ..+++++|+.+|+++++++|+++.+|.++|.++.. ++++++|+.+|+
T Consensus 17 ~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~-~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~-~g~~~~Ai~~~~ 94 (151)
T 3gyz_A 17 DAINSGATLKDINAIPDDMMDDIYSYAYDFY-NKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQI-KEQFQQAADLYA 94 (151)
T ss_dssp HHHHTSCCTGGGCCSCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHCCCCHHHHhCCCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HccHHHHHHHHH
Confidence 3344445678899999999999999999997 89999999999999999999999999999999999 999999999999
Q ss_pred HHHHhCCCCHHHHHhc
Q 046296 150 QAVKSAPDDWLNLIKL 165 (167)
Q Consensus 150 ~Al~l~P~~~~~l~~y 165 (167)
+|++++|+++.++.++
T Consensus 95 ~al~l~P~~~~~~~~l 110 (151)
T 3gyz_A 95 VAFALGKNDYTPVFHT 110 (151)
T ss_dssp HHHHHSSSCCHHHHHH
T ss_pred HHHhhCCCCcHHHHHH
Confidence 9999999999887654
No 36
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.64 E-value=6.2e-16 Score=131.49 Aligned_cols=101 Identities=13% Similarity=0.024 Sum_probs=94.6
Q ss_pred chhhcCCC-hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 046296 63 NYSNNNHG-SSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDA 141 (167)
Q Consensus 63 ~~y~~~g~-~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~ 141 (167)
.+|...++ +++|+.+|+++|+++|+++.+|++++.++. ..+++++|+.+|++||+++|+++.+|++++.++.. ++++
T Consensus 139 ~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~-~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~-~g~~ 216 (382)
T 2h6f_A 139 VLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVE-WLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQE-FKLW 216 (382)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCC
T ss_pred HHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHH-cCCh
Confidence 45667786 999999999999999999999999999987 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 142 SRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 142 ~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
++|+.+|+++|+++|+++.++.++
T Consensus 217 ~eAl~~~~~al~l~P~~~~a~~~l 240 (382)
T 2h6f_A 217 DNELQYVDQLLKEDVRNNSVWNQR 240 (382)
T ss_dssp TTHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHH
Confidence 999999999999999999887654
No 37
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.64 E-value=3.2e-15 Score=103.22 Aligned_cols=98 Identities=17% Similarity=0.234 Sum_probs=90.8
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGD-------GNILSLYADLIW 135 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~-------~~al~~lA~~l~ 135 (167)
..|...+++++|+.+|+++++++|.++.++.+++.++. ..+++++|+.+|++++.+.|++ +.++..+|.++.
T Consensus 12 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 90 (131)
T 1elr_A 12 NDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYF-EKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYF 90 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHH
Confidence 46778899999999999999999999999999999987 7999999999999999999987 999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 046296 136 QAHKDASRAESYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 136 ~~~g~~~eA~~~~e~Al~l~P~~~~~l~ 163 (167)
. .+++++|+.+|++++++.| ++.++.
T Consensus 91 ~-~~~~~~A~~~~~~~~~~~~-~~~~~~ 116 (131)
T 1elr_A 91 K-EEKYKDAIHFYNKSLAEHR-TPDVLK 116 (131)
T ss_dssp H-TTCHHHHHHHHHHHHHHCC-CHHHHH
T ss_pred H-hccHHHHHHHHHHHHHhCC-CHHHHH
Confidence 9 9999999999999999999 565443
No 38
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.64 E-value=1.4e-15 Score=117.10 Aligned_cols=97 Identities=10% Similarity=0.122 Sum_probs=87.7
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-----
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQ----- 136 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~----- 136 (167)
+.+|...+++++|+.+|+++|+++|+++.+++++|.++. ..+++++|+.+|+++++++|+++.+++++|.+++.
T Consensus 61 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~ 139 (208)
T 3urz_A 61 ALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQV-CRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQE 139 (208)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHH
Confidence 357888999999999999999999999999999999987 89999999999999999999999999999987754
Q ss_pred -----------------------------HcCCHHHHHHHHHHHHHhCCCCH
Q 046296 137 -----------------------------AHKDASRAESYFDQAVKSAPDDW 159 (167)
Q Consensus 137 -----------------------------~~g~~~eA~~~~e~Al~l~P~~~ 159 (167)
..+++++|+.+|++||+++|++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 191 (208)
T 3urz_A 140 KKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE 191 (208)
T ss_dssp HHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH
T ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH
Confidence 02468899999999999999754
No 39
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.64 E-value=1.5e-15 Score=116.74 Aligned_cols=100 Identities=14% Similarity=0.032 Sum_probs=93.2
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDG-------NILSLYADLIW 135 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~-------~al~~lA~~l~ 135 (167)
.+|...+++++|+.+|+++++++|+++.++.++|.++. ..+++++|+.+|+++++++|+++ .++..+|.+++
T Consensus 50 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~ 128 (228)
T 4i17_A 50 VCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYR-DMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQ 128 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHH
Confidence 46788899999999999999999999999999999987 89999999999999999999999 66999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCC--CHHHHHh
Q 046296 136 QAHKDASRAESYFDQAVKSAPD--DWLNLIK 164 (167)
Q Consensus 136 ~~~g~~~eA~~~~e~Al~l~P~--~~~~l~~ 164 (167)
. ++++++|+++|++|++++|+ ++.++.+
T Consensus 129 ~-~~~~~~A~~~~~~al~~~p~~~~~~~~~~ 158 (228)
T 4i17_A 129 Q-AGNIEKAEENYKHATDVTSKKWKTDALYS 158 (228)
T ss_dssp H-TTCHHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred H-hccHHHHHHHHHHHHhcCCCcccHHHHHH
Confidence 9 99999999999999999999 7766644
No 40
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.62 E-value=4.3e-15 Score=110.12 Aligned_cols=96 Identities=14% Similarity=0.120 Sum_probs=74.2
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH--HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDF--AKAEELCGRAILANPGDGNILSLYADLIWQAHKD 140 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~--e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~ 140 (167)
.+|...+++++|+.+|+++++++|+++.++.+++.+++...+++ ++|+.+|+++++++|+++.++..+|.+++. +++
T Consensus 52 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~ 130 (177)
T 2e2e_A 52 EYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFM-QAN 130 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTC
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-ccc
Confidence 35667777888888888888888888888888887733357777 888888888888888888888888888877 888
Q ss_pred HHHHHHHHHHHHHhCCCCH
Q 046296 141 ASRAESYFDQAVKSAPDDW 159 (167)
Q Consensus 141 ~~eA~~~~e~Al~l~P~~~ 159 (167)
+++|+.+|+++++++|+++
T Consensus 131 ~~~A~~~~~~al~~~p~~~ 149 (177)
T 2e2e_A 131 YAQAIELWQKVMDLNSPRI 149 (177)
T ss_dssp HHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHHHhhCCCCc
Confidence 8888888888888887764
No 41
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.61 E-value=3.7e-15 Score=128.47 Aligned_cols=101 Identities=12% Similarity=0.069 Sum_probs=90.8
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANPGN---------------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNI 126 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P~n---------------~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~a 126 (167)
+.+|++++++++|+.+|++||+++|++ ..+++++|.++. ..+++++|+.+|++||+++|+++.+
T Consensus 275 G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a 353 (457)
T 1kt0_A 275 GTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYL-KLREYTKAVECCDKALGLDSANEKG 353 (457)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHH
Confidence 356788999999999999999999999 799999999987 8999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 127 LSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 127 l~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
++++|.+++. ++++++|+.+|++|++++|+++.++.+
T Consensus 354 ~~~~g~a~~~-~g~~~~A~~~~~~al~l~P~~~~a~~~ 390 (457)
T 1kt0_A 354 LYRRGEAQLL-MNEFESAKGDFEKVLEVNPQNKAARLQ 390 (457)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHTTC----CHHHH
T ss_pred HHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 9999999999 999999999999999999999866543
No 42
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.61 E-value=7.1e-15 Score=127.71 Aligned_cols=101 Identities=20% Similarity=0.063 Sum_probs=95.0
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDA 141 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~ 141 (167)
+..|.+++++++|+.+|++|++++|+++.+++++|.++. ..+++++|+++|++|++++|+++.++.++|.++.. ++++
T Consensus 13 g~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~~ 90 (477)
T 1wao_1 13 ANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGKF 90 (477)
T ss_dssp SSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH-HTCH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCH
Confidence 357788899999999999999999999999999999987 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHh
Q 046296 142 SRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 142 ~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
++|+++|++|++++|+++.++.+
T Consensus 91 ~eA~~~~~~al~~~p~~~~~~~~ 113 (477)
T 1wao_1 91 RAALRDYETVVKVKPHDKDAKMK 113 (477)
T ss_dssp HHHHHHHHHHHHHSTTCTTHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHH
Confidence 99999999999999998766543
No 43
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.61 E-value=1.1e-14 Score=112.99 Aligned_cols=98 Identities=10% Similarity=0.040 Sum_probs=92.2
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|...+++++|+.+|+++++++|+++.++..+|.++. ..+++++|+.+|+++++++|+++.++..+|.+++. .++++
T Consensus 51 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~g~~~ 128 (275)
T 1xnf_A 51 VLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLT-QAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYY-GGRDK 128 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHH-hccHH
Confidence 46778899999999999999999999999999999987 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHH
Q 046296 143 RAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l 162 (167)
+|+.+|+++++++|+++...
T Consensus 129 ~A~~~~~~a~~~~~~~~~~~ 148 (275)
T 1xnf_A 129 LAQDDLLAFYQDDPNDPFRS 148 (275)
T ss_dssp HHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHhCCCChHHH
Confidence 99999999999999998443
No 44
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.60 E-value=2.6e-14 Score=98.24 Aligned_cols=99 Identities=18% Similarity=0.232 Sum_probs=89.3
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|...+++++|+.+|+++++.+|.++.++..++.++. ..+++++|+.++++++..+|.++.++..++.++.. .++++
T Consensus 9 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~ 86 (136)
T 2fo7_A 9 NAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYD 86 (136)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHH
T ss_pred HHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHH-HhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH-hcCHH
Confidence 35667789999999999999999999999999998886 78999999999999999999999999999999998 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHHH
Q 046296 143 RAESYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~ 163 (167)
+|+++|++++++.|.++.++.
T Consensus 87 ~A~~~~~~~~~~~~~~~~~~~ 107 (136)
T 2fo7_A 87 EAIEYYQKALELDPRSAEAWY 107 (136)
T ss_dssp HHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHhCCCChHHHH
Confidence 999999999999998876553
No 45
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.59 E-value=4.2e-14 Score=102.59 Aligned_cols=100 Identities=13% Similarity=-0.029 Sum_probs=86.7
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|...+++++|+.+|+++++.+|.++.++..++.++. ..+++++|+.+++++++++|.++.++..++.++.. .++++
T Consensus 50 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~ 127 (186)
T 3as5_A 50 IAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYV-QVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDN-LGRFD 127 (186)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHH-cCcHH
Confidence 45677888999999999999999999999999988886 78899999999999999999999999999999888 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHh
Q 046296 143 RAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+|+.+|++++++.|+++.++..
T Consensus 128 ~A~~~~~~~~~~~~~~~~~~~~ 149 (186)
T 3as5_A 128 EAIDSFKIALGLRPNEGKVHRA 149 (186)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHhcCccchHHHHH
Confidence 9999999999999988766543
No 46
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.59 E-value=1.9e-14 Score=110.05 Aligned_cols=100 Identities=18% Similarity=0.025 Sum_probs=91.7
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|...+++++|+.+|+++++++|+++.++.+++.++. ..+++++|+.+|+++++++|+++.++..+|.++.. +++++
T Consensus 147 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~ 224 (258)
T 3uq3_A 147 KEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALA-KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA-VKEYA 224 (258)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-HhhHH
Confidence 46778899999999999999999999999999999886 79999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhC------CCCHHHHHh
Q 046296 143 RAESYFDQAVKSA------PDDWLNLIK 164 (167)
Q Consensus 143 eA~~~~e~Al~l~------P~~~~~l~~ 164 (167)
+|+.+|+++++++ |++..++..
T Consensus 225 ~A~~~~~~a~~~~~~~~~~p~~~~~~~~ 252 (258)
T 3uq3_A 225 SALETLDAARTKDAEVNNGSSAREIDQL 252 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTHHHHHHH
T ss_pred HHHHHHHHHHHhChhhcCCCchHHHHHH
Confidence 9999999999999 888776643
No 47
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.59 E-value=1.9e-15 Score=111.34 Aligned_cols=88 Identities=8% Similarity=-0.100 Sum_probs=83.1
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 046296 76 AYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSA 155 (167)
Q Consensus 76 ~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~ 155 (167)
..|+++++++|+++.++++++.++. ..+++++|+.+|++++.++|+++.++..+|.++.. ++++++|+++|++|++++
T Consensus 8 ~~~~~al~~~p~~~~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~l~ 85 (148)
T 2vgx_A 8 GTIAMLNEISSDTLEQLYSLAFNQY-QSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQA-MGQYDLAIHSYSYGAVMD 85 (148)
T ss_dssp CSHHHHTTCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHS
T ss_pred hhHHHHHcCCHhhHHHHHHHHHHHH-HcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcC
Confidence 5689999999999999999999987 89999999999999999999999999999999999 999999999999999999
Q ss_pred CCCHHHHHhc
Q 046296 156 PDDWLNLIKL 165 (167)
Q Consensus 156 P~~~~~l~~y 165 (167)
|+++.++.++
T Consensus 86 p~~~~~~~~l 95 (148)
T 2vgx_A 86 IXEPRFPFHA 95 (148)
T ss_dssp TTCTHHHHHH
T ss_pred CCCchHHHHH
Confidence 9998877543
No 48
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.59 E-value=4.9e-15 Score=119.61 Aligned_cols=95 Identities=16% Similarity=0.041 Sum_probs=91.0
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|+..+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+..|++|++++|+++.+++++|.++.. +++++
T Consensus 12 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~ 89 (281)
T 2c2l_A 12 NRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE-MESYD 89 (281)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHH
Confidence 56788999999999999999999999999999999987 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCH
Q 046296 143 RAESYFDQAVKSAPDDW 159 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~ 159 (167)
+|+.+|+++++++|+++
T Consensus 90 ~A~~~~~~al~l~p~~~ 106 (281)
T 2c2l_A 90 EAIANLQRAYSLAKEQR 106 (281)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCccch
Confidence 99999999999999763
No 49
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.58 E-value=7.2e-15 Score=123.99 Aligned_cols=102 Identities=18% Similarity=0.087 Sum_probs=95.2
Q ss_pred cchhhcCCChHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIE----------------ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGN 125 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~----------------l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~ 125 (167)
+..|++++++++|+.+|++||+ ++|.++.+++++|.++. ..+++++|+.+|++||+++|+++.
T Consensus 230 g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~ 308 (370)
T 1ihg_A 230 GNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKL-KMSDWQGAVDSCLEALEIDPSNTK 308 (370)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCTTCHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHhCchhHH
Confidence 4577888999999999999999 88899999999999987 899999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 126 ILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 126 al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
+++++|.++.. ++++++|+.+|++|++++|+++.++..+
T Consensus 309 a~~~lg~~~~~-~g~~~eA~~~l~~Al~l~P~~~~~~~~l 347 (370)
T 1ihg_A 309 ALYRRAQGWQG-LKEYDQALADLKKAQEIAPEDKAIQAEL 347 (370)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 99999999999 9999999999999999999998776543
No 50
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.58 E-value=1.2e-14 Score=101.04 Aligned_cols=84 Identities=14% Similarity=0.112 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 046296 72 SSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQA 151 (167)
Q Consensus 72 d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~A 151 (167)
++|+..|+++++++|+++.+++++|.++. ..+++++|+.+|+++++++|+++.++.++|.++.. ++++++|+.+|+++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~~~a 79 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYA-EHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQG-QGDRAGARQAWESG 79 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 36889999999999999999999999987 89999999999999999999999999999999999 99999999999999
Q ss_pred HHhCCC
Q 046296 152 VKSAPD 157 (167)
Q Consensus 152 l~l~P~ 157 (167)
+++.|.
T Consensus 80 l~~~~~ 85 (115)
T 2kat_A 80 LAAAQS 85 (115)
T ss_dssp HHHHHH
T ss_pred HHhccc
Confidence 999884
No 51
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.57 E-value=9.7e-15 Score=108.20 Aligned_cols=98 Identities=12% Similarity=0.181 Sum_probs=87.3
Q ss_pred hhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHHcCCH--
Q 046296 65 SNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL-IWQAHKDA-- 141 (167)
Q Consensus 65 y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~-l~~~~g~~-- 141 (167)
+...+++++|+..|+++++.+|+++.++..+|.++. ..+++++|+.+|+++++++|+++.++..+|.+ ++. .+++
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~-~~~~~~ 97 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYL-WQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQ-ASQHMT 97 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHH-TTTCCC
T ss_pred hhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh-cCCcch
Confidence 556789999999999999999999999999999987 89999999999999999999999999999999 667 8998
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHh
Q 046296 142 SRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 142 ~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
++|+.+|+++++++|+++.++.+
T Consensus 98 ~~A~~~~~~al~~~p~~~~~~~~ 120 (177)
T 2e2e_A 98 AQTRAMIDKALALDSNEITALML 120 (177)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHH
Confidence 99999999999999999877644
No 52
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.57 E-value=2.5e-14 Score=108.03 Aligned_cols=95 Identities=11% Similarity=0.020 Sum_probs=85.7
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----------------HH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDG----------------NI 126 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~----------------~a 126 (167)
.+|...+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+.+|++++++.|.+. .+
T Consensus 45 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (213)
T 1hh8_A 45 CMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYY-QTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEV 123 (213)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHH
Confidence 46778899999999999999999999999999999886 79999999999999999888776 89
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 046296 127 LSLYADLIWQAHKDASRAESYFDQAVKSAPDDW 159 (167)
Q Consensus 127 l~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~ 159 (167)
+.++|.+++. ++++++|+.+|+++++++|++.
T Consensus 124 ~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 124 LYNIAFMYAK-KEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHTTCCSGG
T ss_pred HHHHHHHHHH-ccCHHHHHHHHHHHHHcCcccc
Confidence 9999999998 9999999999999999999653
No 53
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.57 E-value=3.4e-14 Score=115.57 Aligned_cols=101 Identities=12% Similarity=0.137 Sum_probs=90.1
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPG--NALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKD 140 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~--n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~ 140 (167)
.+|...+++++|+.+|+++++++|+ ++.++++++.++. ..+++++|+.+|+++++++|+++.++.+++.++.. +++
T Consensus 185 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~ 262 (365)
T 4eqf_A 185 KSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFH-LSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLAN-GDR 262 (365)
T ss_dssp ----CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTC
T ss_pred HHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCC
Confidence 4677788999999999999999999 9999999999886 79999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 141 ASRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 141 ~~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
+++|+.+|+++++++|+++.++.++
T Consensus 263 ~~~A~~~~~~al~~~p~~~~~~~~l 287 (365)
T 4eqf_A 263 SEEAVEAYTRALEIQPGFIRSRYNL 287 (365)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCchHHHHHH
Confidence 9999999999999999998776543
No 54
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.57 E-value=4.2e-15 Score=123.36 Aligned_cols=101 Identities=18% Similarity=0.030 Sum_probs=84.5
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNA-----------------LLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGN 125 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~-----------------~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~ 125 (167)
..|++++++++|+.+|++||++.|+++ .+++++|.++. ..+++++|+.+|++||+++|+++.
T Consensus 187 ~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~ 265 (338)
T 2if4_A 187 NSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLI-KLKRYDEAIGHCNIVLTEEEKNPK 265 (338)
T ss_dssp HHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHH-TTTCCHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHH
Confidence 467788999999999999999999988 48999999887 899999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 126 ILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 126 al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
+++++|.++.. ++++++|+.+|++|++++|+++.++.++
T Consensus 266 a~~~lg~a~~~-~g~~~~A~~~l~~al~l~p~~~~a~~~L 304 (338)
T 2if4_A 266 ALFRRGKAKAE-LGQMDSARDDFRKAQKYAPDDKAIRREL 304 (338)
T ss_dssp HHHHHHHHHHT-TTCHHHHHHHHHHTTC------------
T ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 99999999999 9999999999999999999998776543
No 55
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.56 E-value=4.1e-14 Score=107.80 Aligned_cols=98 Identities=15% Similarity=0.143 Sum_probs=57.4
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASR 143 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~e 143 (167)
+|...+++++|+.+|+++++++|+++.++..++.++. ..+++++|+.+|+++++.+|+++.++..++.++.. ++++++
T Consensus 134 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~ 211 (243)
T 2q7f_A 134 VLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLA-NEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAY-KENREK 211 (243)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCTTH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-ccCHHH
Confidence 3445555566666666666666655555555555554 45556666666666666666666666666666555 566666
Q ss_pred HHHHHHHHHHhCCCCHHHHH
Q 046296 144 AESYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 144 A~~~~e~Al~l~P~~~~~l~ 163 (167)
|+.+|+++++++|+++.++.
T Consensus 212 A~~~~~~~~~~~p~~~~~~~ 231 (243)
T 2q7f_A 212 ALEMLDKAIDIQPDHMLALH 231 (243)
T ss_dssp HHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHccCcchHHHHH
Confidence 66666666666666555443
No 56
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.56 E-value=1.4e-14 Score=104.10 Aligned_cols=84 Identities=18% Similarity=0.133 Sum_probs=76.9
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 046296 80 KMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDW 159 (167)
Q Consensus 80 kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~ 159 (167)
++..+||+.+.++.++|..++ ..+++++|+.+|++||+++|+++.++.++|.+++. ++++++|+..|++||+++|+++
T Consensus 4 r~a~inP~~a~~~~~~G~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~p~~~ 81 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYF-KKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTK-LMEFQRALDDCDTCIRLDSKFI 81 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHh-hccHHHHHHHHHHHHHhhhhhh
Confidence 456689999999999999997 89999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHhc
Q 046296 160 LNLIKL 165 (167)
Q Consensus 160 ~~l~~y 165 (167)
.++.++
T Consensus 82 ~a~~~l 87 (126)
T 4gco_A 82 KGYIRK 87 (126)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877543
No 57
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.55 E-value=5.2e-14 Score=114.37 Aligned_cols=93 Identities=15% Similarity=0.106 Sum_probs=77.4
Q ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH-HHH
Q 046296 68 NHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASR-AES 146 (167)
Q Consensus 68 ~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~e-A~~ 146 (167)
.+++++|+.+|+++++.+|+++.+++++|.++. ..+++++|+++|++|++++|+++.++.+++.++.. +|++++ +.+
T Consensus 179 ~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~-~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~-~g~~~eaa~~ 256 (291)
T 3mkr_A 179 GEKLQDAYYIFQEMADKCSPTLLLLNGQAACHM-AQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQH-LGKPPEVTNR 256 (291)
T ss_dssp TTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHH
T ss_pred chHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCCHHHHHH
Confidence 467888888888888888888888888888776 78888888888888888888888888888888888 888765 568
Q ss_pred HHHHHHHhCCCCHHHH
Q 046296 147 YFDQAVKSAPDDWLNL 162 (167)
Q Consensus 147 ~~e~Al~l~P~~~~~l 162 (167)
+++++++++|+++.+.
T Consensus 257 ~~~~~~~~~P~~~~~~ 272 (291)
T 3mkr_A 257 YLSQLKDAHRSHPFIK 272 (291)
T ss_dssp HHHHHHHHCTTCHHHH
T ss_pred HHHHHHHhCCCChHHH
Confidence 8888888888888765
No 58
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.55 E-value=7e-14 Score=96.02 Aligned_cols=94 Identities=19% Similarity=0.273 Sum_probs=88.6
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|...+++++|+.+|+++++.+|.++.++..++.++. ..+++++|+.+++++++..|.++.++..++.++.. .++++
T Consensus 43 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~ 120 (136)
T 2fo7_A 43 NAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYD 120 (136)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-HccHH
Confidence 35667789999999999999999999999999999887 79999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 046296 143 RAESYFDQAVKSAPDD 158 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~ 158 (167)
+|+.+|+++++++|++
T Consensus 121 ~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 121 EAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHccCCCC
Confidence 9999999999999974
No 59
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.55 E-value=1.3e-13 Score=104.96 Aligned_cols=97 Identities=14% Similarity=0.206 Sum_probs=59.8
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASR 143 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~e 143 (167)
+|...+++++|+.+|+++++++|+++.++..++.++. ..+++++|+.+|+++++++|+++.++..++.++.. .+++++
T Consensus 66 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~ 143 (243)
T 2q7f_A 66 LLSSVNELERALAFYDKALELDSSAATAYYGAGNVYV-VKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVK-LEQPKL 143 (243)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH-TSCHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hccHHH
Confidence 4455566666666666666666666666666666554 56666666666666666666666666666666665 666666
Q ss_pred HHHHHHHHHHhCCCCHHHH
Q 046296 144 AESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 144 A~~~~e~Al~l~P~~~~~l 162 (167)
|+.+|++++++.|+++.++
T Consensus 144 A~~~~~~~~~~~~~~~~~~ 162 (243)
T 2q7f_A 144 ALPYLQRAVELNENDTEAR 162 (243)
T ss_dssp HHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHhCCccHHHH
Confidence 6666666666666655443
No 60
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.55 E-value=9.5e-15 Score=105.72 Aligned_cols=87 Identities=6% Similarity=-0.129 Sum_probs=79.4
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 046296 76 AYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSA 155 (167)
Q Consensus 76 ~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~ 155 (167)
..|+++++++|+++.+++.+|..+. ..+++++|+.+|++++.++|+++.++..+|.++.. ++++++|+.+|++|++++
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQY-QAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQS-LGLYEQALQSYSYGALMD 82 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcC
Confidence 5788999999999999999999987 89999999999999999999999999999999999 999999999999999999
Q ss_pred CCCHHHHHh
Q 046296 156 PDDWLNLIK 164 (167)
Q Consensus 156 P~~~~~l~~ 164 (167)
|+++.++.+
T Consensus 83 p~~~~~~~~ 91 (142)
T 2xcb_A 83 INEPRFPFH 91 (142)
T ss_dssp TTCTHHHHH
T ss_pred CCCcHHHHH
Confidence 999887654
No 61
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.54 E-value=5.3e-14 Score=122.78 Aligned_cols=101 Identities=15% Similarity=0.132 Sum_probs=91.0
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|...+++++|+.+|+++++++|+++.++.++|.++. ..+++++|+++|++|++++|+++.++.++|.++.. +++++
T Consensus 31 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~ 108 (568)
T 2vsy_A 31 DAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRW-TQQRHAEAAVLLQQASDAAPEHPGIALWLGHALED-AGQAE 108 (568)
T ss_dssp HHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-cCCHH
Confidence 46677789999999999999999999999999999886 79999999999999999999999999999999998 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHhc
Q 046296 143 RAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
+|+++|+++++++|+++.++.++
T Consensus 109 ~A~~~~~~al~~~p~~~~~~~~l 131 (568)
T 2vsy_A 109 AAAAAYTRAHQLLPEEPYITAQL 131 (568)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHH
Confidence 99999999999999998776543
No 62
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.54 E-value=7.1e-14 Score=112.91 Aligned_cols=93 Identities=14% Similarity=0.015 Sum_probs=55.9
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASR 143 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~e 143 (167)
+|...+++++|+.+|+++++++|+++.++.+++.++. ..+++++|+.+|+++++++|+++.++..+|.++.. ++++++
T Consensus 226 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~~ 303 (368)
T 1fch_A 226 LFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLA-NGNQSEEAVAAYRRALELQPGYIRSRYNLGISCIN-LGAHRE 303 (368)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-CCCHHH
Confidence 4455556666666666666666666666666665554 55666666666666666666666666666666665 666666
Q ss_pred HHHHHHHHHHhCCCC
Q 046296 144 AESYFDQAVKSAPDD 158 (167)
Q Consensus 144 A~~~~e~Al~l~P~~ 158 (167)
|+.+|++++++.|++
T Consensus 304 A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 304 AVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCC
Confidence 666666666665555
No 63
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.54 E-value=7.3e-14 Score=106.81 Aligned_cols=100 Identities=18% Similarity=0.109 Sum_probs=89.8
Q ss_pred chhhcCCChHHHHHHHHHHHH--------------------------hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIE--------------------------ANPGNALLLGNYARFLKEVRGDFAKAEELCGRA 116 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~--------------------------l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rA 116 (167)
.+|...+++++|+.+|+++++ .+|.++.++..++.++. ..+++++|+.+|+++
T Consensus 87 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a 165 (258)
T 3uq3_A 87 NAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYF-TKSDWPNAVKAYTEM 165 (258)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHH-HhcCHHHHHHHHHHH
Confidence 356677788888888888887 77888899999999987 899999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 117 ILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 117 l~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
++++|+++.++..+|.++.. .+++++|+.+|+++++++|+++.++..
T Consensus 166 ~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~ 212 (258)
T 3uq3_A 166 IKRAPEDARGYSNRAAALAK-LMSFPEAIADCNKAIEKDPNFVRAYIR 212 (258)
T ss_dssp HHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HhcCcccHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 99999999999999999999 999999999999999999999877643
No 64
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.54 E-value=1e-13 Score=113.78 Aligned_cols=94 Identities=18% Similarity=0.172 Sum_probs=45.4
Q ss_pred hcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHH
Q 046296 66 NNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAE 145 (167)
Q Consensus 66 ~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~ 145 (167)
...+++++|+..|+++++++|+++.++.+++.++. ..+++++|+.+|+++++++|+++.++.+++.++.. .+++++|+
T Consensus 214 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~ 291 (388)
T 1w3b_A 214 KEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYY-EQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKE-KGSVAEAE 291 (388)
T ss_dssp HTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHH-HSCHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-cCCHHHHH
Confidence 33344444444444444444444444444444443 44445555555555555555555555455544444 45555555
Q ss_pred HHHHHHHHhCCCCHHH
Q 046296 146 SYFDQAVKSAPDDWLN 161 (167)
Q Consensus 146 ~~~e~Al~l~P~~~~~ 161 (167)
.+|++++++.|+++.+
T Consensus 292 ~~~~~al~~~p~~~~~ 307 (388)
T 1w3b_A 292 DCYNTALRLCPTHADS 307 (388)
T ss_dssp HHHHHHHHHCTTCHHH
T ss_pred HHHHHHHhhCcccHHH
Confidence 5555555555544433
No 65
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.53 E-value=3.3e-14 Score=122.79 Aligned_cols=94 Identities=10% Similarity=-0.125 Sum_probs=89.7
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHH
Q 046296 69 HGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVR--------GDFAKAEELCGRAILANP---GDGNILSLYADLIWQA 137 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~--------gd~e~A~~~~~rAl~l~P---~~~~al~~lA~~l~~~ 137 (167)
+++++|+.+|+++++++|+++.+|++++.++. .. +++++|+.+|++|++++| +++.++.++|.+++.
T Consensus 193 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~- 270 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLDGRSWYILGNAYL-SLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKY- 270 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHH-
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHH-
Confidence 89999999999999999999999999999986 67 899999999999999999 999999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 138 HKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 138 ~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
++++++|+++|++|++++|+++.++.+
T Consensus 271 ~g~~~~A~~~~~~al~l~p~~~~a~~~ 297 (474)
T 4abn_A 271 EESYGEALEGFSQAAALDPAWPEPQQR 297 (474)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 999999999999999999999976644
No 66
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.53 E-value=2.7e-14 Score=116.17 Aligned_cols=99 Identities=14% Similarity=-0.002 Sum_probs=92.2
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDA 141 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~ 141 (167)
+..|.+.+++++|+.+|+++++++|+++.+++.++.++. ..+++++|+.+|+++++++|+++.++..++.++.. ++++
T Consensus 72 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~ 149 (365)
T 4eqf_A 72 GLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQA-ENENEQAAIVALQRCLELQPNNLKALMALAVSYTN-TSHQ 149 (365)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHc-cccH
Confidence 346778899999999999999999999999999999987 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCCHHHH
Q 046296 142 SRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 142 ~eA~~~~e~Al~l~P~~~~~l 162 (167)
++|+.+|++++++.|+++.++
T Consensus 150 ~~A~~~~~~al~~~p~~~~~~ 170 (365)
T 4eqf_A 150 QDACEALKNWIKQNPKYKYLV 170 (365)
T ss_dssp HHHHHHHHHHHHHCHHHHCC-
T ss_pred HHHHHHHHHHHHhCccchHHH
Confidence 999999999999999866443
No 67
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.53 E-value=8.2e-14 Score=114.41 Aligned_cols=99 Identities=18% Similarity=0.130 Sum_probs=75.7
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|...+++++|+.+|+++++++|+++.++.+++.++. ..+++++|+.+|+++++++|+++.++..++.++.. .++++
T Consensus 245 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~ 322 (388)
T 1w3b_A 245 CVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALK-EKGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE-QGNIE 322 (388)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH-cCCHH
Confidence 35666777888888888888888888888888877775 67778888888888888777777777777777777 77777
Q ss_pred HHHHHHHHHHHhCCCCHHHHH
Q 046296 143 RAESYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~ 163 (167)
+|+++|++++++.|+++.++.
T Consensus 323 ~A~~~~~~al~~~p~~~~~~~ 343 (388)
T 1w3b_A 323 EAVRLYRKALEVFPEFAAAHS 343 (388)
T ss_dssp HHHHHHHHHTTSCTTCHHHHH
T ss_pred HHHHHHHHHHhcCCCcHHHHH
Confidence 777777777777777765543
No 68
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.53 E-value=5.7e-14 Score=101.88 Aligned_cols=100 Identities=11% Similarity=0.059 Sum_probs=93.6
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|...+++++|+.+|+++++.+|.++.++..++.++. ..+++++|+.+++++++++|+++.++..++.++.. .++++
T Consensus 16 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~ 93 (186)
T 3as5_A 16 ISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYV-KTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQ-VQKYD 93 (186)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCHH
Confidence 45677899999999999999999999999999999887 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHh
Q 046296 143 RAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+|+++|++++++.|+++.++..
T Consensus 94 ~A~~~~~~~~~~~~~~~~~~~~ 115 (186)
T 3as5_A 94 LAVPLLIKVAEANPINFNVRFR 115 (186)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHhcCcHhHHHHHH
Confidence 9999999999999999876643
No 69
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.53 E-value=3.7e-14 Score=122.42 Aligned_cols=100 Identities=13% Similarity=0.030 Sum_probs=93.7
Q ss_pred chhhcCCCh-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc---
Q 046296 63 NYSNNNHGS-SSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAH--- 138 (167)
Q Consensus 63 ~~y~~~g~~-d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~--- 138 (167)
.+|...+++ ++|+.+|+++++++|+++.+|+++|.++. ..+++++|+++|++|++++|+ +.++.++|.++.. +
T Consensus 110 ~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~-~~~~ 186 (474)
T 4abn_A 110 KALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYW-KKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQ-LQTD 186 (474)
T ss_dssp HHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTT-CCCS
T ss_pred HHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHH-hccC
Confidence 467778999 99999999999999999999999999987 899999999999999999999 7999999999999 9
Q ss_pred ------CCHHHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 139 ------KDASRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 139 ------g~~~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
+++++|+++|++|++++|+++.++.++
T Consensus 187 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 219 (474)
T 4abn_A 187 SGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYIL 219 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred ChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 999999999999999999999877543
No 70
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.53 E-value=1e-13 Score=110.44 Aligned_cols=99 Identities=13% Similarity=0.041 Sum_probs=93.5
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|...+++++|+.+|+++++.+|+++.++..++.++. ..+++++|+.+|+++++++|+++.++..+|.++.. .++++
T Consensus 11 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~ 88 (359)
T 3ieg_A 11 KKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFL-AMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLK-QGKLD 88 (359)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHH-cCChH
Confidence 46788899999999999999999999999999999987 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCC---CCHHHHH
Q 046296 143 RAESYFDQAVKSAP---DDWLNLI 163 (167)
Q Consensus 143 eA~~~~e~Al~l~P---~~~~~l~ 163 (167)
+|+.+|+++++++| +++.++.
T Consensus 89 ~A~~~~~~~~~~~~~~~~~~~~~~ 112 (359)
T 3ieg_A 89 EAEDDFKKVLKSNPSEQEEKEAES 112 (359)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcccChHHHHH
Confidence 99999999999999 7776653
No 71
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.52 E-value=7.1e-14 Score=108.64 Aligned_cols=98 Identities=12% Similarity=0.212 Sum_probs=80.3
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|...+++++|+.+|+++++++|+++.++.+++.++. ..+++++|+.+|+++++++|.++.++.+++..++. .++++
T Consensus 82 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~ 159 (272)
T 3u4t_A 82 KILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFY-NKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY-NKEYV 159 (272)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH-HTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH-HHHHH
Confidence 45777788888888888888888888888888888876 78888888888888888888888888888844444 56888
Q ss_pred HHHHHHHHHHHhCCCCHHHH
Q 046296 143 RAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l 162 (167)
+|+.+|+++++++|+++.++
T Consensus 160 ~A~~~~~~a~~~~p~~~~~~ 179 (272)
T 3u4t_A 160 KADSSFVKVLELKPNIYIGY 179 (272)
T ss_dssp HHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHhCccchHHH
Confidence 88888888888888887654
No 72
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.52 E-value=9.6e-14 Score=112.15 Aligned_cols=99 Identities=11% Similarity=-0.039 Sum_probs=87.0
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAE-------------------------------- 110 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~-------------------------------- 110 (167)
..+...+++++|+..|+++++++|+++.+++++|.++. ..+++++|+
T Consensus 125 ~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~ 203 (287)
T 3qou_A 125 MQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLI-ALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTP 203 (287)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH-HTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHH-HCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCc
Confidence 34567899999999999999999999999999999886 788887765
Q ss_pred --HHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHH
Q 046296 111 --ELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD--WLNLI 163 (167)
Q Consensus 111 --~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~--~~~l~ 163 (167)
+.|+++++++|+++.+++++|.++.. +|++++|+..|+++++++|++ ..++.
T Consensus 204 a~~~l~~al~~~P~~~~~~~~la~~l~~-~g~~~~A~~~l~~~l~~~p~~~~~~a~~ 259 (287)
T 3qou_A 204 EIQQLQQQVAENPEDAALATQLALQLHQ-VGRNEEALELLFGHLRXDLTAADGQTRX 259 (287)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTGGGGHHHH
T ss_pred cHHHHHHHHhcCCccHHHHHHHHHHHHH-cccHHHHHHHHHHHHhcccccccchHHH
Confidence 44566688899999999999999999 999999999999999999988 55443
No 73
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.52 E-value=2.8e-13 Score=107.88 Aligned_cols=100 Identities=12% Similarity=0.082 Sum_probs=91.9
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHH----HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALL----LGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAH 138 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~----l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~ 138 (167)
..|...+++++|+.+|+++++.+|+++.. +..++.++. ..+++++|+.+|+++++++|+++.++..+|.++.. .
T Consensus 242 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 319 (359)
T 3ieg_A 242 EELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFS-KDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLI-E 319 (359)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-T
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-c
Confidence 45788899999999999999999999854 556888886 79999999999999999999999999999999999 9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 139 KDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 139 g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+++++|+.+|+++++++|+++.++..
T Consensus 320 g~~~~A~~~~~~a~~~~p~~~~~~~~ 345 (359)
T 3ieg_A 320 EMYDEAIQDYEAAQEHNENDQQIREG 345 (359)
T ss_dssp TCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCChHHHHH
Confidence 99999999999999999999987654
No 74
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.51 E-value=1.8e-13 Score=111.14 Aligned_cols=101 Identities=13% Similarity=-0.042 Sum_probs=89.2
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHH--HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYA--RFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKD 140 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA--~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~ 140 (167)
.+|.+.+++++|+..|+++++++|++.......+ .++. ..+++++|+.+|+++++.+|+++.+++++|.++.. +|+
T Consensus 138 ~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~-~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~-~g~ 215 (291)
T 3mkr_A 138 QILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAA-GGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMA-QGR 215 (291)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-CTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH-TTC
T ss_pred HHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCC
Confidence 5788899999999999999999999976554433 2222 34889999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 141 ASRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 141 ~~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
+++|+++|++|++++|+++.++.++
T Consensus 216 ~~eA~~~l~~al~~~p~~~~~l~~l 240 (291)
T 3mkr_A 216 WEAAEGVLQEALDKDSGHPETLINL 240 (291)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 9999999999999999999988765
No 75
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.51 E-value=2.8e-13 Score=101.48 Aligned_cols=88 Identities=19% Similarity=0.209 Sum_probs=54.5
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-CCHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAH-KDAS 142 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~-g~~~ 142 (167)
.|...+++++|+.+|+++++++|+++.++..++.++. ..+++++|+.+|+++++++|+++.++..++.++.. . ++++
T Consensus 17 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~ 94 (225)
T 2vq2_A 17 EYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQ-YLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCG-RLNRPA 94 (225)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCCHH
T ss_pred HHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCcHH
Confidence 3445566666666666666666666666666666554 56666666666666666666666666666666665 6 6666
Q ss_pred HHHHHHHHHHH
Q 046296 143 RAESYFDQAVK 153 (167)
Q Consensus 143 eA~~~~e~Al~ 153 (167)
+|+.+|+++++
T Consensus 95 ~A~~~~~~~~~ 105 (225)
T 2vq2_A 95 ESMAYFDKALA 105 (225)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 66666666666
No 76
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.51 E-value=2.5e-13 Score=107.31 Aligned_cols=95 Identities=14% Similarity=0.173 Sum_probs=49.4
Q ss_pred hhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHH
Q 046296 65 SNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRA 144 (167)
Q Consensus 65 y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA 144 (167)
|...+++++|+.+|+++++.+|+++.++..++.++. ..+++++|+.+++++++++|+++.++..++.++.. .+++++|
T Consensus 148 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A 225 (327)
T 3cv0_A 148 FAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYN-LSNNYDSAAANLRRAVELRPDDAQLWNKLGATLAN-GNRPQEA 225 (327)
T ss_dssp TTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHH
Confidence 334445555555555555555555555555555443 45555555555555555555555555555555555 5555555
Q ss_pred HHHHHHHHHhCCCCHHH
Q 046296 145 ESYFDQAVKSAPDDWLN 161 (167)
Q Consensus 145 ~~~~e~Al~l~P~~~~~ 161 (167)
+.+|++++++.|+++.+
T Consensus 226 ~~~~~~a~~~~~~~~~~ 242 (327)
T 3cv0_A 226 LDAYNRALDINPGYVRV 242 (327)
T ss_dssp HHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHcCCCCHHH
Confidence 55555555555554443
No 77
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.50 E-value=2.9e-13 Score=101.45 Aligned_cols=97 Identities=14% Similarity=0.081 Sum_probs=65.3
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHcCC
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVR-GDFAKAEELCGRAIL--ANPGDGNILSLYADLIWQAHKD 140 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~-gd~e~A~~~~~rAl~--l~P~~~~al~~lA~~l~~~~g~ 140 (167)
+|...+++++|+.+|+++++++|+++.++..++.++. .. +++++|+.+|+++++ .+|.++.++..++.++.. .++
T Consensus 51 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 128 (225)
T 2vq2_A 51 IYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLC-GRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAK-QGQ 128 (225)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHH-TTC
T ss_pred HHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHH-cCC
Confidence 4555666777777777777777777777777766665 56 677777777777766 555556666667776666 677
Q ss_pred HHHHHHHHHHHHHhCCCCHHHH
Q 046296 141 ASRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 141 ~~eA~~~~e~Al~l~P~~~~~l 162 (167)
+++|+.+|+++++..|+++.++
T Consensus 129 ~~~A~~~~~~~~~~~~~~~~~~ 150 (225)
T 2vq2_A 129 FGLAEAYLKRSLAAQPQFPPAF 150 (225)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCchHH
Confidence 7777777777777777665544
No 78
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.50 E-value=3.1e-14 Score=128.29 Aligned_cols=99 Identities=9% Similarity=-0.036 Sum_probs=82.0
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|...+++++|+..|+++++++|+++.+++++|.++. ..+++++|++.|++|++++|+++.++.++|.++.. +++++
T Consensus 441 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~-~g~~~ 518 (681)
T 2pzi_A 441 RALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAEL-LTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL-AGNTD 518 (681)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH-HTCCC
T ss_pred HHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cCChH
Confidence 45667788888888888888888888888888888876 78888888888888888888888888888888888 88888
Q ss_pred HHHHHHHHHHHhCCCCHHHHHh
Q 046296 143 RAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+ +++|++|++++|+++.++.+
T Consensus 519 ~-~~~~~~al~~~P~~~~a~~~ 539 (681)
T 2pzi_A 519 E-HKFYQTVWSTNDGVISAAFG 539 (681)
T ss_dssp T-TCHHHHHHHHCTTCHHHHHH
T ss_pred H-HHHHHHHHHhCCchHHHHHH
Confidence 8 88888888888888776654
No 79
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.50 E-value=2.8e-13 Score=104.28 Aligned_cols=94 Identities=18% Similarity=0.230 Sum_probs=44.7
Q ss_pred hhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 65 SNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL--ANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 65 y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~--l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
|...+++++|+.+|+++++++|.++.++..++.++. ..+++++|+++|+++++ .+|.++.++..++.+++. .++++
T Consensus 81 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~ 158 (252)
T 2ho1_A 81 FQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLY-EQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQ-MKKPA 158 (252)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHH-TTCHH
T ss_pred HHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHH-cCCHH
Confidence 334444444444444444444444444444444443 34444444444444444 444444444444444444 44444
Q ss_pred HHHHHHHHHHHhCCCCHH
Q 046296 143 RAESYFDQAVKSAPDDWL 160 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~ 160 (167)
+|+.+|++++++.|.++.
T Consensus 159 ~A~~~~~~~~~~~~~~~~ 176 (252)
T 2ho1_A 159 QAKEYFEKSLRLNRNQPS 176 (252)
T ss_dssp HHHHHHHHHHHHCSCCHH
T ss_pred HHHHHHHHHHhcCcccHH
Confidence 444444444444444443
No 80
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.49 E-value=1.9e-14 Score=129.70 Aligned_cols=99 Identities=11% Similarity=-0.034 Sum_probs=94.0
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|...+++++|+..|++|++++|+++.+++++|.++. ..+++++ +++|++|++++|+++.+++++|.++.. +|+++
T Consensus 475 ~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~-~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~-~g~~~ 551 (681)
T 2pzi_A 475 VAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAE-LAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSA-EGDRV 551 (681)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHH-HHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHH-cCCHH
Confidence 46788899999999999999999999999999999987 8999999 999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHh
Q 046296 143 RAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+|+++|++|++++|+++.++.+
T Consensus 552 ~A~~~~~~al~l~P~~~~a~~~ 573 (681)
T 2pzi_A 552 GAVRTLDEVPPTSRHFTTARLT 573 (681)
T ss_dssp HHHHHHHTSCTTSTTHHHHHHH
T ss_pred HHHHHHHhhcccCcccHHHHHH
Confidence 9999999999999999877754
No 81
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.49 E-value=1.2e-13 Score=109.26 Aligned_cols=100 Identities=16% Similarity=0.137 Sum_probs=93.5
Q ss_pred chhhcCCChHHHHHHHHHHHHhC---------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEAN---------PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL 133 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~---------P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~ 133 (167)
.+|...+++++|+.+|++++++. |.++.++.+++.++. ..+++++|+.+|+++++++|+++.++..+|.+
T Consensus 201 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 279 (330)
T 3hym_B 201 VVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCR-KLKKYAEALDYHRQALVLIPQNASTYSAIGYI 279 (330)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhhCccchHHHHHHHHH
Confidence 46778899999999999999997 778899999999987 89999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 134 IWQAHKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 134 l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+.. ++++++|+.+|+++++++|+++.++..
T Consensus 280 ~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~ 309 (330)
T 3hym_B 280 HSL-MGNFENAVDYFHTALGLRRDDTFSVTM 309 (330)
T ss_dssp HHH-HTCHHHHHHHHHTTTTTCSCCHHHHHH
T ss_pred HHH-hccHHHHHHHHHHHHccCCCchHHHHH
Confidence 999 999999999999999999999976644
No 82
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.49 E-value=6.1e-13 Score=102.41 Aligned_cols=97 Identities=18% Similarity=0.090 Sum_probs=64.7
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASR 143 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~e 143 (167)
+|...+++++|+.+|+++++++|.++.++..++.++. ..+++++|+.+|+++++.+|.++.++..++.++.. .+++++
T Consensus 150 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~ 227 (252)
T 2ho1_A 150 VSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLY-KEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKV-FEDRDT 227 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHH-TTCHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH-ccCHHH
Confidence 4555666666666666666666666666666666665 56666666666666666666666666666666666 666666
Q ss_pred HHHHHHHHHHhCCCCHHHH
Q 046296 144 AESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 144 A~~~~e~Al~l~P~~~~~l 162 (167)
|++++++++++.|+++.+.
T Consensus 228 A~~~~~~~~~~~p~~~~~~ 246 (252)
T 2ho1_A 228 AASYGLQLKRLYPGSLEYQ 246 (252)
T ss_dssp HHHHHHHHHHHCTTSHHHH
T ss_pred HHHHHHHHHHHCCCCHHHH
Confidence 6666666666666666544
No 83
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.49 E-value=2.8e-13 Score=107.13 Aligned_cols=97 Identities=16% Similarity=0.073 Sum_probs=59.2
Q ss_pred hhhcCC-ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 64 YSNNNH-GSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 64 ~y~~~g-~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
+|...+ ++++|+.+|+++++++|+++.++..++.++. ..+++++|+.+|++++++.|++..++..++.++.. .++++
T Consensus 99 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~ 176 (330)
T 3hym_B 99 YYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFA-VESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGL-TNNSK 176 (330)
T ss_dssp HHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHH-TTCHH
T ss_pred HHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHH-HhhHH
Confidence 344445 5666666666666666666666666666554 56666666666666666666666666666666665 66666
Q ss_pred HHHHHHHHHHHhCCCCHHHH
Q 046296 143 RAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l 162 (167)
+|+.+|++++++.|+++.++
T Consensus 177 ~A~~~~~~al~~~~~~~~~~ 196 (330)
T 3hym_B 177 LAERFFSQALSIAPEDPFVM 196 (330)
T ss_dssp HHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHHHHHHHHhCCCChHHH
Confidence 66666666666666665444
No 84
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.49 E-value=2.5e-13 Score=102.46 Aligned_cols=92 Identities=11% Similarity=0.033 Sum_probs=85.8
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|...+++++|+.+|++++ +| ++.++++++.++. ..+++++|+.+|++|++++|+++.++.++|.+++. +++++
T Consensus 14 ~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~-~~~~~ 88 (213)
T 1hh8_A 14 VLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYT-ILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ-TEKYD 88 (213)
T ss_dssp HHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cccHH
Confidence 46778899999999999996 44 7899999999987 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCH
Q 046296 143 RAESYFDQAVKSAPDDW 159 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~ 159 (167)
+|+++|++++++.|.++
T Consensus 89 ~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 89 LAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHHHHHHHHTTTTCS
T ss_pred HHHHHHHHHHHhCCCcc
Confidence 99999999999999866
No 85
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.49 E-value=3.7e-13 Score=111.73 Aligned_cols=95 Identities=14% Similarity=0.061 Sum_probs=91.5
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
..|.+.+++++|+.+|+++++.+|+++.+++.++.++. ..+++++|+.+|+++++++|+++.++..++.++.. +++++
T Consensus 34 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~ 111 (450)
T 2y4t_A 34 KKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFL-AMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLK-QGKLD 111 (450)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-cCCHH
Confidence 46788899999999999999999999999999999987 89999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCCH
Q 046296 143 RAESYFDQAVKSAPDDW 159 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~ 159 (167)
+|+.+|+++++++|+++
T Consensus 112 ~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 112 EAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHhcCCCCh
Confidence 99999999999999987
No 86
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.49 E-value=3.7e-13 Score=108.65 Aligned_cols=99 Identities=9% Similarity=-0.048 Sum_probs=92.8
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDA 141 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~ 141 (167)
+..|...+++++|+.+|+++++++|+++.++..++.++. ..+++++|+.+|+++++++|+++.++..++.++.. ++++
T Consensus 71 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~ 148 (368)
T 1fch_A 71 GLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQA-ENEQELLAISALRRCLELKPDNQTALMALAVSFTN-ESLQ 148 (368)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-cCCH
Confidence 356778899999999999999999999999999999987 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCCHHHH
Q 046296 142 SRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 142 ~eA~~~~e~Al~l~P~~~~~l 162 (167)
++|+.+|++++++.|+++.++
T Consensus 149 ~~A~~~~~~~~~~~~~~~~~~ 169 (368)
T 1fch_A 149 RQACEILRDWLRYTPAYAHLV 169 (368)
T ss_dssp HHHHHHHHHHHHTSTTTGGGC
T ss_pred HHHHHHHHHHHHhCcCcHHHH
Confidence 999999999999999876543
No 87
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.48 E-value=4.3e-13 Score=105.91 Aligned_cols=94 Identities=18% Similarity=0.100 Sum_probs=89.8
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|...+++++|+.+|+++++.+|+++.++..++.++. ..+++++|+.+|+++++++|+++.++..++.++.. +++++
T Consensus 180 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~g~~~ 257 (327)
T 3cv0_A 180 VLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLA-NGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSN-MSQYD 257 (327)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-hccHH
Confidence 46788899999999999999999999999999999987 79999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 046296 143 RAESYFDQAVKSAPDD 158 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~ 158 (167)
+|+++|++++++.|++
T Consensus 258 ~A~~~~~~a~~~~~~~ 273 (327)
T 3cv0_A 258 LAAKQLVRAIYMQVGG 273 (327)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhCCcc
Confidence 9999999999999874
No 88
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.48 E-value=1.5e-13 Score=106.84 Aligned_cols=96 Identities=9% Similarity=0.041 Sum_probs=58.1
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHHcC
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGD----GNILSLYADLIWQAHK 139 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~----~~al~~lA~~l~~~~g 139 (167)
.|+..+++++|+.+|+++++++|+++.++..++.++. ..+++++|+.+|+++++ .|.+ +.++..+|.++.. .+
T Consensus 12 ~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~-~~ 88 (272)
T 3u4t_A 12 FLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYY-ELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMK-KG 88 (272)
T ss_dssp HHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHH-HTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHH-TT
T ss_pred HHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHH-cc
Confidence 4555566666666666666666666666666666554 56666666666666666 3332 2235566666666 66
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHH
Q 046296 140 DASRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 140 ~~~eA~~~~e~Al~l~P~~~~~l 162 (167)
++++|+++|+++++++|+++.++
T Consensus 89 ~~~~A~~~~~~a~~~~~~~~~~~ 111 (272)
T 3u4t_A 89 QDSLAIQQYQAAVDRDTTRLDMY 111 (272)
T ss_dssp CHHHHHHHHHHHHHHSTTCTHHH
T ss_pred cHHHHHHHHHHHHhcCcccHHHH
Confidence 66666666666666666655444
No 89
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.48 E-value=1.3e-13 Score=106.74 Aligned_cols=98 Identities=15% Similarity=0.091 Sum_probs=89.5
Q ss_pred hhcCCChHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 046296 65 SNNNHGSSSTDAYNEKMIEA----NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKD 140 (167)
Q Consensus 65 y~~~g~~d~A~~~~~kAL~l----~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~ 140 (167)
+...+++++|+.+|+++++. +|.++.+++.++.++. ..+++++|+.+|+++++++|+++.++..+|.++.. .++
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~~ 92 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYD-SLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQ-AGN 92 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTC
T ss_pred cCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH-HcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-ccC
Confidence 34567899999999999998 4567889999999987 89999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 141 ASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 141 ~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+++|+.+|+++++++|+++.++.+
T Consensus 93 ~~~A~~~~~~al~~~~~~~~~~~~ 116 (275)
T 1xnf_A 93 FDAAYEAFDSVLELDPTYNYAHLN 116 (275)
T ss_dssp HHHHHHHHHHHHHHCTTCTHHHHH
T ss_pred HHHHHHHHHHHHhcCccccHHHHH
Confidence 999999999999999998876643
No 90
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.46 E-value=3.5e-13 Score=105.72 Aligned_cols=93 Identities=16% Similarity=-0.006 Sum_probs=56.1
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHH--------cCCHHHHHHHHHHHHHhCCCCHHHH-----
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGN---ALLLGNYARFLKEV--------RGDFAKAEELCGRAILANPGDGNIL----- 127 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n---~~~l~~lA~~l~~~--------~gd~e~A~~~~~rAl~l~P~~~~al----- 127 (167)
+|+..+++++|+..|+++++++|++ +.+++.++.++. . .+++++|+..|+++++.+|+++.+.
T Consensus 61 ~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~-~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~ 139 (261)
T 3qky_A 61 AYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYY-KLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQK 139 (261)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH-HHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHH-HhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHH
Confidence 4555566666666666666665543 445556665554 4 5666666666666666666655444
Q ss_pred ------------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 128 ------------SLYADLIWQAHKDASRAESYFDQAVKSAPDD 158 (167)
Q Consensus 128 ------------~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~ 158 (167)
+.+|.+++. ++++++|+.+|+++++..|++
T Consensus 140 ~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~p~~ 181 (261)
T 3qky_A 140 IRELRAKLARKQYEAARLYER-RELYEAAAVTYEAVFDAYPDT 181 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHCCCC
Confidence 555666666 666666666666666666654
No 91
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.46 E-value=6.4e-13 Score=110.25 Aligned_cols=101 Identities=12% Similarity=0.069 Sum_probs=92.8
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANPGNAL----LLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQA 137 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P~n~~----~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~ 137 (167)
+.+|...+++++|+.+|+++++++|+++. ++..++.++. ..+++++|+.+|+++++++|+++.++..++.++..
T Consensus 264 ~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~- 341 (450)
T 2y4t_A 264 AEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFS-KDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLI- 341 (450)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-
Confidence 35677889999999999999999999965 7788898886 79999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 138 HKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 138 ~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
++++++|+.+|+++++++|+++.++..
T Consensus 342 ~~~~~~A~~~~~~al~~~p~~~~~~~~ 368 (450)
T 2y4t_A 342 EEMYDEAIQDYETAQEHNENDQQIREG 368 (450)
T ss_dssp TTCHHHHHHHHHHHHTTSSSCHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCcchHHHHHH
Confidence 999999999999999999999877543
No 92
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.46 E-value=5.7e-13 Score=116.21 Aligned_cols=99 Identities=11% Similarity=0.015 Sum_probs=93.1
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc---C
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAH---K 139 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~---g 139 (167)
.+|...+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+++|+++++++|+++.++.+++.++.. + +
T Consensus 65 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~g 142 (568)
T 2vsy_A 65 RVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALE-DAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRR-LCDWR 142 (568)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCT
T ss_pred HHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hhccc
Confidence 46788899999999999999999999999999999987 89999999999999999999999999999999999 9 9
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHH
Q 046296 140 DASRAESYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 140 ~~~eA~~~~e~Al~l~P~~~~~l~ 163 (167)
++++|+++|+++++.+|++...+.
T Consensus 143 ~~~~A~~~~~~al~~~p~~~~~~~ 166 (568)
T 2vsy_A 143 ALDVLSAQVRAAVAQGVGAVEPFA 166 (568)
T ss_dssp THHHHHHHHHHHHHHTCCCSCHHH
T ss_pred cHHHHHHHHHHHHhcCCcccChHH
Confidence 999999999999999998765443
No 93
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.44 E-value=1.9e-13 Score=93.93 Aligned_cols=73 Identities=12% Similarity=0.109 Sum_probs=67.1
Q ss_pred hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 84 ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 158 (167)
Q Consensus 84 l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~ 158 (167)
.+|+++.+++++|.++. ..+++++|+.+|++|++++|+++.++.++|.++.. ++++++|+.+|++++++.|.+
T Consensus 2 ~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHL-KHDNASRALALFEELVETDPDYVGTYYHLGKLYER-LDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp ---CCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhhhcC
Confidence 58999999999999987 89999999999999999999999999999999999 999999999999999997743
No 94
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.44 E-value=2.9e-14 Score=96.95 Aligned_cols=86 Identities=14% Similarity=0.082 Sum_probs=70.7
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGD------GNILSLYADLIWQ 136 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~------~~al~~lA~~l~~ 136 (167)
..|+..+++++|+.+|+++++++|+++.++++++.++. ..+++++|+++|+++++++|++ +.++..++.++..
T Consensus 12 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~ 90 (111)
T 2l6j_A 12 NSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALI-KLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGA 90 (111)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHH
Confidence 45677788888888888888888888888888888876 7888888888888888888888 8888888888887
Q ss_pred HcCCHHHHHHHHHH
Q 046296 137 AHKDASRAESYFDQ 150 (167)
Q Consensus 137 ~~g~~~eA~~~~e~ 150 (167)
.+++++|+..|++
T Consensus 91 -~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 91 -VGSVQIPVVEVDE 103 (111)
T ss_dssp -HHCCCCCSSSSSS
T ss_pred -HHhHhhhHhHHHH
Confidence 7777777666554
No 95
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.43 E-value=1.3e-12 Score=110.61 Aligned_cols=100 Identities=15% Similarity=0.114 Sum_probs=86.5
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|...+++++|+.+|+++++++|+++.++..++.++. ..+++++|+.+|+++++++|+++.++..++.+++. .++++
T Consensus 284 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~g~~~ 361 (537)
T 3fp2_A 284 LTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYF-ILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYK-QGKFT 361 (537)
T ss_dssp HHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHH
Confidence 35667788999999999999999999999999998886 78899999999999999999999999999999888 99999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHh
Q 046296 143 RAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+|+.+|++++++.|+++.++.+
T Consensus 362 ~A~~~~~~~~~~~~~~~~~~~~ 383 (537)
T 3fp2_A 362 ESEAFFNETKLKFPTLPEVPTF 383 (537)
T ss_dssp HHHHHHHHHHHHCTTCTHHHHH
T ss_pred HHHHHHHHHHHhCCCChHHHHH
Confidence 9999999999999988766543
No 96
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.43 E-value=3.2e-13 Score=100.73 Aligned_cols=93 Identities=12% Similarity=-0.054 Sum_probs=72.5
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHH----------------------------------
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKA---------------------------------- 109 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A---------------------------------- 109 (167)
.+...+++++|+..|+++++++|+++.++++++.++. ..+++++|
T Consensus 15 ~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a 93 (176)
T 2r5s_A 15 ELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLL-ETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPE 93 (176)
T ss_dssp HHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHH-HTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-HCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchH
Confidence 4556677777777777777777777777777777664 45555444
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 110 EELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 158 (167)
Q Consensus 110 ~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~ 158 (167)
+..|+++++++|+++.+++++|.++.. .|++++|+.+|+++++++|+.
T Consensus 94 ~~~~~~al~~~P~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 94 LKRLEQELAANPDNFELACELAVQYNQ-VGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHH-cccHHHHHHHHHHHHHhCccc
Confidence 556667778889999999999999998 999999999999999999875
No 97
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.43 E-value=1.1e-13 Score=103.25 Aligned_cols=75 Identities=16% Similarity=0.031 Sum_probs=65.1
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 85 NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 85 ~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l 162 (167)
||.....++.++..+. ..+++++|+..|+++++++|+++.++..+|.++.. +|++++|+.+|+++++++| ++.+.
T Consensus 2 ~~~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~-~g~~~~A~~~~~~a~~~~p-~~~~~ 76 (176)
T 2r5s_A 2 NASPDEQLLKQVSELL-QQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLE-TKQFELAQELLATIPLEYQ-DNSYK 76 (176)
T ss_dssp ----CTTHHHHHHHHH-HTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHH-TTCHHHHHHHHTTCCGGGC-CHHHH
T ss_pred CCCHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-CCCHHHHHHHHHHhhhccC-ChHHH
Confidence 4555566778888886 79999999999999999999999999999999999 9999999999999999999 77543
No 98
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.43 E-value=1.8e-12 Score=85.05 Aligned_cols=77 Identities=18% Similarity=0.260 Sum_probs=67.7
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 87 GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 87 ~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
.++.+++.++.++. ..+++++|+.+|+++++++|+++.++..+|.+++. .+++++|+.+|+++++++|+++.++.++
T Consensus 7 ~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~~~~~~~~l 83 (91)
T 1na3_A 7 NSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNNAEAKQNL 83 (91)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred ccHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 46788888898886 78999999999999999999999999999999998 9999999999999999999988776543
No 99
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.42 E-value=1.4e-12 Score=109.36 Aligned_cols=95 Identities=15% Similarity=0.057 Sum_probs=89.7
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDA 141 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~ 141 (167)
+..|++.+++++|+.+|+++++.+| ++.++..++.++. ..+++++|+.+|+++++++|+++.++..+|.++.. ++++
T Consensus 13 g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~ 89 (514)
T 2gw1_A 13 GNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYV-SVGDLKKVVEMSTKALELKPDYSKVLLRRASANEG-LGKF 89 (514)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHhccHHHHHHHHHHHHhcCc-cHHHHHhHHHHHH-HHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHH-HhhH
Confidence 3568889999999999999999999 6999999999987 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCCH
Q 046296 142 SRAESYFDQAVKSAPDDW 159 (167)
Q Consensus 142 ~eA~~~~e~Al~l~P~~~ 159 (167)
++|+..|++++++.|.+.
T Consensus 90 ~~A~~~~~~~~~~~~~~~ 107 (514)
T 2gw1_A 90 ADAMFDLSVLSLNGDFND 107 (514)
T ss_dssp HHHHHHHHHHHHSSSCCG
T ss_pred HHHHHHHHHHHhcCCCcc
Confidence 999999999999999664
No 100
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.42 E-value=1.4e-13 Score=92.73 Aligned_cols=87 Identities=14% Similarity=0.096 Sum_probs=77.0
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNAL-LLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDA 141 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~-~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~ 141 (167)
..|...+++++|+.+|+++++++|+++. +++++|.++. ..+++++|+++|+++++++|+++.++.+ +.+
T Consensus 8 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~---------~~~ 77 (99)
T 2kc7_A 8 KELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYR-KLGDWQKALNNYQSAIELNPDSPALQAR---------KMV 77 (99)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTSTHHHHH---------HHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCcHHHHHH---------HHH
Confidence 4677889999999999999999999999 9999999887 7999999999999999999999887643 456
Q ss_pred HHHHHHHHHHHHhCCCCH
Q 046296 142 SRAESYFDQAVKSAPDDW 159 (167)
Q Consensus 142 ~eA~~~~e~Al~l~P~~~ 159 (167)
.+|+.+|++++.++|+++
T Consensus 78 ~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 78 MDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHHHHHHCCTTHHHHCCS
T ss_pred HHHHHHHHHHhccCcccc
Confidence 788999999999988764
No 101
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.41 E-value=2.7e-12 Score=110.39 Aligned_cols=100 Identities=12% Similarity=0.074 Sum_probs=92.7
Q ss_pred chhhcCCChHHHHHHHHHHHHh------CCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEA------NPGN-ALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIW 135 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l------~P~n-~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~ 135 (167)
.+|.+.+++++|+.+|++++++ +|++ +.++..++.++. ..+++++|+++|+++++++|+++.++..++.++.
T Consensus 483 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 561 (597)
T 2xpi_A 483 VVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYR-KLKMYDAAIDALNQGLLLSTNDANVHTAIALVYL 561 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 4677889999999999999999 6765 789999999987 8999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 136 QAHKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 136 ~~~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
. .|++++|+++|+++++++|+++.++..
T Consensus 562 ~-~g~~~~A~~~~~~~l~~~p~~~~~~~~ 589 (597)
T 2xpi_A 562 H-KKIPGLAITHLHESLAISPNEIMASDL 589 (597)
T ss_dssp H-TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred H-hCCHHHHHHHHHHHHhcCCCChHHHHH
Confidence 9 999999999999999999999876644
No 102
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.41 E-value=9.5e-13 Score=106.48 Aligned_cols=95 Identities=12% Similarity=0.076 Sum_probs=41.2
Q ss_pred cCCChHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHH
Q 046296 67 NNHGSSSTDAYNEKMIEANPGNAL-LLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAE 145 (167)
Q Consensus 67 ~~g~~d~A~~~~~kAL~l~P~n~~-~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~ 145 (167)
+.+++++|+..|+++|+++|.++. +|.+++.++. ..+++++|+..|++|++++|.++.++..++.+.+...+++++|+
T Consensus 111 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~ 189 (308)
T 2ond_A 111 SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR-RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAF 189 (308)
T ss_dssp HTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHH-HHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHH
T ss_pred hcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHH
Confidence 344445555555555555554443 4444444443 34444444444444444444443333333332221124444444
Q ss_pred HHHHHHHHhCCCCHHHH
Q 046296 146 SYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 146 ~~~e~Al~l~P~~~~~l 162 (167)
++|++++++.|+++.++
T Consensus 190 ~~~~~al~~~p~~~~~~ 206 (308)
T 2ond_A 190 KIFELGLKKYGDIPEYV 206 (308)
T ss_dssp HHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhCCCcHHHH
Confidence 44444444444444433
No 103
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.41 E-value=7.3e-13 Score=103.87 Aligned_cols=93 Identities=16% Similarity=0.107 Sum_probs=84.9
Q ss_pred CCChHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHH
Q 046296 68 NHGSSSTDAYNEKMIEANPGNALLL-----------------GNYARFLKEVRGDFAKAEELCGRAILANPG---DGNIL 127 (167)
Q Consensus 68 ~g~~d~A~~~~~kAL~l~P~n~~~l-----------------~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~---~~~al 127 (167)
.+++++|+..|+++++.+|+++.+. +.+|.++. ..+++++|+..|+++++..|+ .+.++
T Consensus 110 ~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~l~~~p~~~~~~~a~ 188 (261)
T 3qky_A 110 QTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYE-RRELYEAAAVTYEAVFDAYPDTPWADDAL 188 (261)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTSTTHHHHH
T ss_pred chhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHCCCCchHHHHH
Confidence 7899999999999999999997766 78898886 899999999999999999998 56799
Q ss_pred HHHHHHHHHHc----------CCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 128 SLYADLIWQAH----------KDASRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 128 ~~lA~~l~~~~----------g~~~eA~~~~e~Al~l~P~~~~~l 162 (167)
..++.++.. + +++++|+.+|+++++..|+++.+.
T Consensus 189 ~~l~~~~~~-~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 232 (261)
T 3qky_A 189 VGAMRAYIA-YAEQSVRARQPERYRRAVELYERLLQIFPDSPLLR 232 (261)
T ss_dssp HHHHHHHHH-HHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHH
T ss_pred HHHHHHHHH-hcccchhhcccchHHHHHHHHHHHHHHCCCChHHH
Confidence 999999987 6 999999999999999999997544
No 104
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.41 E-value=6.2e-13 Score=112.51 Aligned_cols=97 Identities=16% Similarity=0.094 Sum_probs=84.0
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDA 141 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~ 141 (167)
+..|++++++++|+.+|+++++++|+++.++++++.++. ..+++++|+..|+++++++|+++.++..+|.++.. ++++
T Consensus 32 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~ 109 (537)
T 3fp2_A 32 GNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYI-STGDLEKVIEFTTKALEIKPDHSKALLRRASANES-LGNF 109 (537)
T ss_dssp HHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCH
T ss_pred HHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH-cCCH
Confidence 357888999999999999999999999999999999987 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhCCCCHHH
Q 046296 142 SRAESYFDQAVKSAPDDWLN 161 (167)
Q Consensus 142 ~eA~~~~e~Al~l~P~~~~~ 161 (167)
++|+..|+ ++.++|+....
T Consensus 110 ~~A~~~~~-~~~~~~~~~~~ 128 (537)
T 3fp2_A 110 TDAMFDLS-VLSLNGDFDGA 128 (537)
T ss_dssp HHHHHHHH-HHC--------
T ss_pred HHHHHHHH-HHhcCCCCChH
Confidence 99999995 89888876643
No 105
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.40 E-value=2.7e-12 Score=90.02 Aligned_cols=77 Identities=16% Similarity=0.052 Sum_probs=71.6
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 86 PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 86 P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
|..+..+..+|..+. ..+++++|+.+|++|++++|+++.++.++|.+++. ++++++|+.+|+++++++|+++.++.+
T Consensus 1 p~~a~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~ 77 (126)
T 3upv_A 1 SMKAEEARLEGKEYF-TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK-LMSFPEAIADCNKAIEKDPNFVRAYIR 77 (126)
T ss_dssp CHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CchHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 456788999999887 89999999999999999999999999999999999 999999999999999999999877654
No 106
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.40 E-value=3.5e-12 Score=91.74 Aligned_cols=90 Identities=14% Similarity=-0.022 Sum_probs=81.9
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHHcCC
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL--IWQAHKD 140 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~--l~~~~g~ 140 (167)
.+|...+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+.+|+++++++|+++.++..++.+ +.. .++
T Consensus 55 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~-~~~ 132 (166)
T 1a17_A 55 LAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM-ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK-QKA 132 (166)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-HHH
Confidence 46778899999999999999999999999999999987 89999999999999999999999998666555 777 899
Q ss_pred HHHHHHHHHHHHHh
Q 046296 141 ASRAESYFDQAVKS 154 (167)
Q Consensus 141 ~~eA~~~~e~Al~l 154 (167)
+++|+++++++..+
T Consensus 133 ~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 133 FERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHcccchHHH
Confidence 99999999998765
No 107
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.40 E-value=1.5e-12 Score=100.81 Aligned_cols=71 Identities=13% Similarity=-0.005 Sum_probs=35.0
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---HHHHHHHHHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGN---ILSLYADLIW 135 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~---~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~---al~~lA~~l~ 135 (167)
.++..+++++|+..|+++++..|+++ .+++.+|.++. ..+++++|+..|+++++++|+++. +++.+|.+++
T Consensus 13 ~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~ 89 (225)
T 2yhc_A 13 QKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYY-KNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNM 89 (225)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHH
Confidence 34444555555555555555555442 34555555444 455555555555555555555432 4444444443
No 108
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.39 E-value=1.1e-12 Score=101.55 Aligned_cols=71 Identities=11% Similarity=-0.022 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 046296 88 NALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDG---NILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWL 160 (167)
Q Consensus 88 n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~---~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~ 160 (167)
++..++++|..+. ..+++++|+..|+++++..|+++ .+++.+|.+++. ++++++|+..|++++++.|+++.
T Consensus 3 ~~~~~~~~a~~~~-~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~~~P~~~~ 76 (225)
T 2yhc_A 3 PPNEIYATAQQKL-QDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIRLNPTHPN 76 (225)
T ss_dssp CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCTT
T ss_pred CHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHCcCCCc
Confidence 5778889998886 79999999999999999999874 789999999999 99999999999999999999875
No 109
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.39 E-value=4.6e-12 Score=106.08 Aligned_cols=101 Identities=12% Similarity=0.038 Sum_probs=85.5
Q ss_pred chhhcCCChHHHHHHHHHHHHh---------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEA---------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILAN--------PGDGN 125 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l---------~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~--------P~~~~ 125 (167)
.+|..+|++++|+.+|++|+++ +|....++.++|.++. .++++++|+.+|++++++. +..+.
T Consensus 59 ~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~-~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~ 137 (472)
T 4g1t_A 59 YLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYY-HMGRLSDVQIYVDKVKHVCEKFSSPYRIESPE 137 (472)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHhHhcccccchhhHH
Confidence 4677889999999999999987 7888899999999887 7999999999999999873 45678
Q ss_pred HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 126 ILSLYADLIWQA-HKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 126 al~~lA~~l~~~-~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
++.++++++... .++|++|+.+|++|++++|+++.++.+
T Consensus 138 ~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~ 177 (472)
T 4g1t_A 138 LDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSG 177 (472)
T ss_dssp HHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 888888877651 346899999999999999999876644
No 110
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.39 E-value=2.1e-12 Score=104.46 Aligned_cols=90 Identities=18% Similarity=0.202 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCCHHHHHHHH
Q 046296 71 SSSTDAYNEKMIE-ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGN-ILSLYADLIWQAHKDASRAESYF 148 (167)
Q Consensus 71 ~d~A~~~~~kAL~-l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~-al~~lA~~l~~~~g~~~eA~~~~ 148 (167)
+++|+..|++|++ ++|+++.+|.+++.++. ..+++++|++.|++||+++|.++. +|..++.++.. ++++++|+.+|
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~~~~~~A~~~~ 157 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNMLLYFAYADYEE-SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR-AEGIKSGRMIF 157 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHH-HHCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-hcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHH-hcCHHHHHHHH
Confidence 3999999999999 79999999999999886 899999999999999999999987 99999999998 99999999999
Q ss_pred HHHHHhCCCCHHHH
Q 046296 149 DQAVKSAPDDWLNL 162 (167)
Q Consensus 149 e~Al~l~P~~~~~l 162 (167)
++|+++.|.+..++
T Consensus 158 ~~a~~~~p~~~~~~ 171 (308)
T 2ond_A 158 KKAREDARTRHHVY 171 (308)
T ss_dssp HHHHTSTTCCTHHH
T ss_pred HHHHhcCCCCHHHH
Confidence 99999999876554
No 111
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.38 E-value=4.7e-12 Score=83.05 Aligned_cols=73 Identities=19% Similarity=0.216 Sum_probs=69.1
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQ 136 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~ 136 (167)
..|...+++++|+.+|+++++++|+++.++.+++.++. ..+++++|+.+|+++++++|+++.++.+++.++..
T Consensus 17 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 89 (91)
T 1na3_A 17 NAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 89 (91)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 46778899999999999999999999999999999987 89999999999999999999999999999999876
No 112
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.38 E-value=5.3e-12 Score=108.55 Aligned_cols=99 Identities=16% Similarity=0.031 Sum_probs=83.2
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|.+.+++++|+.+|+++++++|+++.+|+.++.++. ..+++++|+++|++++++.|+++.++..++.++.. .++++
T Consensus 381 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~ 458 (597)
T 2xpi_A 381 IYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFA-IEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQ-LGNIL 458 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHH-HTCHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cCCHH
Confidence 45677788888888888888888888888888888776 78888888888888888888888888888888888 88888
Q ss_pred HHHHHHHHHHHhCCCCHHHHH
Q 046296 143 RAESYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~ 163 (167)
+|+++|++++++.|+++.++.
T Consensus 459 ~A~~~~~~~~~~~~~~~~~~~ 479 (597)
T 2xpi_A 459 LANEYLQSSYALFQYDPLLLN 479 (597)
T ss_dssp HHHHHHHHHHHHCCCCHHHHH
T ss_pred HHHHHHHHHHHhCCCChHHHH
Confidence 888888888888888876653
No 113
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.38 E-value=8.1e-12 Score=87.85 Aligned_cols=80 Identities=18% Similarity=0.059 Sum_probs=73.4
Q ss_pred HhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 83 EANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 83 ~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l 162 (167)
..+|.++..++.++.++. ..+++++|+.+|+++++++|+++.++.++|.+++. ++++++|+.+|+++++++|+++.++
T Consensus 3 ~~~~~~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~ 80 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQSVKAH 80 (137)
T ss_dssp ---CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCccccHHHHHHHHHHHH-HhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCchhHHHH
Confidence 467899999999999987 89999999999999999999999999999999999 9999999999999999999998776
Q ss_pred Hh
Q 046296 163 IK 164 (167)
Q Consensus 163 ~~ 164 (167)
.+
T Consensus 81 ~~ 82 (137)
T 3q49_B 81 FF 82 (137)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 114
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.36 E-value=2e-12 Score=108.33 Aligned_cols=100 Identities=17% Similarity=0.087 Sum_probs=88.4
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNAL------LLGNYARFLKEV---RGDFAKAEELCGRAILANPGDGNILSLYADL 133 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~------~l~~lA~~l~~~---~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~ 133 (167)
.+|...+++++|+.+|+++++++|+++. ++..++.++. . .+++++|+.+|+++++++|+++.++..++.+
T Consensus 380 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 458 (514)
T 2gw1_A 380 EILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLT-RNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQM 458 (514)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHH-TSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHh-hhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 4577788999999999999999888865 8888888886 7 7999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 134 IWQAHKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 134 l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+.. ++++++|+.+|+++++++|+++.++..
T Consensus 459 ~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~~ 488 (514)
T 2gw1_A 459 KLQ-QEDIDEAITLFEESADLARTMEEKLQA 488 (514)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCSSHHHHHHH
T ss_pred HHH-hcCHHHHHHHHHHHHHhccccHHHHHH
Confidence 998 999999999999999999998877654
No 115
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.36 E-value=3.2e-12 Score=85.79 Aligned_cols=79 Identities=10% Similarity=0.091 Sum_probs=73.8
Q ss_pred hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHH
Q 046296 84 ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPD--DWLN 161 (167)
Q Consensus 84 l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~--~~~~ 161 (167)
++|+++.++..++.++. ..+++++|+.+|+++++++|.++.++..+|.+++. ++++++|+++|+++++++|+ ++.+
T Consensus 1 l~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~ 78 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQY-DAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYN-LERYEEAVDCYNYVINVIEDEYNKDV 78 (112)
T ss_dssp CCCSSTTGGGGHHHHHH-SSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTSCCTTCHHH
T ss_pred CCCCcHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCcccchHHH
Confidence 47999999999999887 79999999999999999999999999999999999 99999999999999999999 8876
Q ss_pred HHh
Q 046296 162 LIK 164 (167)
Q Consensus 162 l~~ 164 (167)
+.+
T Consensus 79 ~~~ 81 (112)
T 2kck_A 79 WAA 81 (112)
T ss_dssp HHH
T ss_pred HHH
Confidence 644
No 116
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.35 E-value=1.2e-12 Score=105.53 Aligned_cols=96 Identities=14% Similarity=0.075 Sum_probs=81.5
Q ss_pred chhhcC-CChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-------HHH
Q 046296 63 NYSNNN-HGSSSTDAYNEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGN-------ILS 128 (167)
Q Consensus 63 ~~y~~~-g~~d~A~~~~~kAL~l~P~n------~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~-------al~ 128 (167)
.+|... +++++|+.+|++|+++.|.+ +.++.+++.++. ..+++++|+.+|+++++++|++.. ++.
T Consensus 125 ~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 203 (292)
T 1qqe_A 125 EILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKA-LDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFL 203 (292)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHH
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHH
Confidence 467776 99999999999999999865 567899999987 899999999999999999998754 578
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 046296 129 LYADLIWQAHKDASRAESYFDQAVKSAPDDWL 160 (167)
Q Consensus 129 ~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~ 160 (167)
+++.++.. ++++++|+.+|+++++++|+.+.
T Consensus 204 ~lg~~~~~-~g~~~~A~~~~~~al~l~p~~~~ 234 (292)
T 1qqe_A 204 KKGLCQLA-ATDAVAAARTLQEGQSEDPNFAD 234 (292)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHGGGCC------
T ss_pred HHHHHHHH-cCCHHHHHHHHHHHHhhCCCCCC
Confidence 89999999 99999999999999999998654
No 117
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.35 E-value=2.4e-12 Score=103.71 Aligned_cols=96 Identities=19% Similarity=0.076 Sum_probs=81.1
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC------HHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGN------ALLLGNYARFLKEVR-GDFAKAEELCGRAILANPGD------GNILSL 129 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n------~~~l~~lA~~l~~~~-gd~e~A~~~~~rAl~l~P~~------~~al~~ 129 (167)
.+|...+++++|+.+|++|+++.|.. +.++.+++.++. .. +++++|+.+|++|+++.|.+ +.++.+
T Consensus 85 ~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~ 163 (292)
T 1qqe_A 85 KCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILE-NDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIK 163 (292)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHH
Confidence 46777889999999999999988754 567888898876 65 99999999999999998854 567888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 046296 130 YADLIWQAHKDASRAESYFDQAVKSAPDDWL 160 (167)
Q Consensus 130 lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~ 160 (167)
+|.++.. ++++++|+.+|++++++.|+++.
T Consensus 164 lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 164 CADLKAL-DGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHH-hCCHHHHHHHHHHHHHHHhcCCc
Confidence 9999998 99999999999999999887653
No 118
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.35 E-value=7.3e-12 Score=91.93 Aligned_cols=79 Identities=18% Similarity=0.093 Sum_probs=73.2
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 85 NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 85 ~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+|.++.+++.++.++. ..+++++|+.+|++||+++|+++.++.++|.+++. ++++++|+.+|+++++++|+++.++.+
T Consensus 7 ~~~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~ 84 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAM-ARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSA-SGQHEKAAEDAELATVVDPKYSKAWSR 84 (164)
T ss_dssp CCHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhhhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 4667888999999887 89999999999999999999999999999999999 999999999999999999999987754
Q ss_pred c
Q 046296 165 L 165 (167)
Q Consensus 165 y 165 (167)
+
T Consensus 85 l 85 (164)
T 3sz7_A 85 L 85 (164)
T ss_dssp H
T ss_pred H
Confidence 3
No 119
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.34 E-value=6.5e-12 Score=103.88 Aligned_cols=90 Identities=11% Similarity=0.020 Sum_probs=83.7
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|.+.+++++|+.+|+++|+++|+++.+++++|.++. ..+++++|+.+|++|++++|+++.++.+++.++.. +++++
T Consensus 204 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~-~~~~~ 281 (336)
T 1p5q_A 204 MCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHL-AVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQR-IRRQL 281 (336)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHHHH
Confidence 46788899999999999999999999999999999987 89999999999999999999999999999999999 99999
Q ss_pred HH-HHHHHHHHHh
Q 046296 143 RA-ESYFDQAVKS 154 (167)
Q Consensus 143 eA-~~~~e~Al~l 154 (167)
+| ...|++++..
T Consensus 282 ~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 282 AREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 98 5677777764
No 120
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.34 E-value=9.2e-12 Score=84.33 Aligned_cols=69 Identities=14% Similarity=0.036 Sum_probs=65.7
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 88 NALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 158 (167)
Q Consensus 88 n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~ 158 (167)
++.++.++|.++. ..+++++|+.+|++|++++|+++.++.++|.+++. ++++++|+++|+++++++|++
T Consensus 3 ~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLF-KQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIK-LGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCc
Confidence 4678889999887 79999999999999999999999999999999999 999999999999999999998
No 121
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.33 E-value=1.9e-12 Score=92.58 Aligned_cols=71 Identities=17% Similarity=0.216 Sum_probs=65.8
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 046296 87 GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDW 159 (167)
Q Consensus 87 ~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~ 159 (167)
+.+.++.++|..++ ..+++++|+.+|++||+++|+++.++.++|.+++. ++++++|+..|++||+++|+++
T Consensus 6 d~A~a~~~lG~~~~-~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 6 DAAIAEKDLGNAAY-KQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFE-EKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHH-hhhHHHHHHHHHHHHHhCcccc
Confidence 34567889999997 89999999999999999999999999999999999 9999999999999999988764
No 122
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.31 E-value=3e-12 Score=98.53 Aligned_cols=90 Identities=23% Similarity=0.310 Sum_probs=82.8
Q ss_pred chhhcCCChHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEA--------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA--------NPGDGNI 126 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l--------~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l--------~P~~~~a 126 (167)
.+|...+++++|+.+|++++++ +|..+.++.+++.++. ..+++++|+.+|++|+++ +|....+
T Consensus 51 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 129 (283)
T 3edt_B 51 LVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQ 129 (283)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHcCCCChHHHHH
Confidence 5678889999999999999998 4667788999999887 899999999999999998 5778899
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 127 LSLYADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 127 l~~lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
+.++|.+++. ++++++|+.+|++++++
T Consensus 130 ~~~la~~~~~-~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 130 LNNLALLCQN-QGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHHHHHHHT-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 9999999999 99999999999999998
No 123
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.30 E-value=1.4e-12 Score=108.18 Aligned_cols=97 Identities=11% Similarity=-0.004 Sum_probs=52.4
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|.+.+++++|+.+|+++|+++|+++.+++++|.++. ..+++++|+.+|++|++++|+++.++..++.+.....+..+
T Consensus 238 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~-~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~ 316 (338)
T 2if4_A 238 ACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKA-ELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQ 316 (338)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHTTC------------------------
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 46778899999999999999999999999999999987 89999999999999999999999999999988555367888
Q ss_pred HHHHHHHHHHHhCCCCHH
Q 046296 143 RAESYFDQAVKSAPDDWL 160 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~ 160 (167)
++..+|++++.+.|+++.
T Consensus 317 ~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 317 KQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp ------------------
T ss_pred HHHHHHHHhhCCCCCCCC
Confidence 999999999999998764
No 124
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.30 E-value=2.4e-11 Score=101.71 Aligned_cols=96 Identities=17% Similarity=0.202 Sum_probs=68.2
Q ss_pred cCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH--Hc--------------------------------------CCH
Q 046296 67 NNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKE--VR--------------------------------------GDF 106 (167)
Q Consensus 67 ~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~--~~--------------------------------------gd~ 106 (167)
.++++++|+.+|++|++++|+++.++.+++.++.. .. +++
T Consensus 150 ~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~ 229 (472)
T 4g1t_A 150 GGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEE 229 (472)
T ss_dssp CTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------
T ss_pred ccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHH
Confidence 34678999999999999999999988887765421 12 344
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 046296 107 AKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 107 e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~ 163 (167)
++|+++|++++.++|+++.++.++|.++.. .+++++|+.+|++|++++|+++.++.
T Consensus 230 ~~a~~~~~~al~~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~ 285 (472)
T 4g1t_A 230 GEGEKLVEEALEKAPGVTDVLRSAAKFYRR-KDEPDKAIELLKKALEYIPNNAYLHC 285 (472)
T ss_dssp CHHHHHHHHHHHHCSSCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHHHHHhCccHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHhCCChHHHHH
Confidence 556666666666666677777777777776 77777777777777777777776553
No 125
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.30 E-value=2.7e-11 Score=85.98 Aligned_cols=73 Identities=11% Similarity=-0.064 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 91 LLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 91 ~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
.++.+|..+. ..+++++|+..|++|++++|+++.+++.+|.++.. .+++++|+.+|++|++++|+++.++.++
T Consensus 19 ~~~~~g~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~P~~~~~~~~l 91 (121)
T 1hxi_A 19 NPMEEGLSML-KLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAE-NEKDGLAIIALNHARMLDPKDIAVHAAL 91 (121)
T ss_dssp CHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hHHHHHHHHH-HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3567788776 79999999999999999999999999999999999 9999999999999999999999877543
No 126
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.30 E-value=1.6e-11 Score=84.83 Aligned_cols=73 Identities=19% Similarity=0.056 Sum_probs=68.2
Q ss_pred CCCCHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 046296 85 NPGNALLLGNYARFLKEVRGD---FAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDW 159 (167)
Q Consensus 85 ~P~n~~~l~~lA~~l~~~~gd---~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~ 159 (167)
+|+++.++..+|.+++ ..++ .++|+.++++||+++|+++.+++.+|.++++ .++|++|+.+|+++++.+|.++
T Consensus 2 ~p~~~~~~~~~a~al~-~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~-~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 2 NAVTATQLAAKATTLY-YLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI-SFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CCCCHHHHHHHHHHHH-HTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTCCCTTC
T ss_pred CCCCHHHHHHHHHHHH-HhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCCc
Confidence 7999999999999997 4554 7999999999999999999999999999999 9999999999999999999854
No 127
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.26 E-value=8.6e-12 Score=95.98 Aligned_cols=92 Identities=16% Similarity=0.188 Sum_probs=84.7
Q ss_pred chhhcCCChHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEA--------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA--------NPGDGNI 126 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l--------~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l--------~P~~~~a 126 (167)
.+|...+++++|+.+|++++++ +|..+.++.+++.++. ..+++++|+.+|++++++ +|....+
T Consensus 93 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 171 (283)
T 3edt_B 93 VLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQ-NQGKAEEVEYYYRRALEIYATRLGPDDPNVAKT 171 (283)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 4678889999999999999999 5777889999999987 799999999999999999 7888899
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 046296 127 LSLYADLIWQAHKDASRAESYFDQAVKSAP 156 (167)
Q Consensus 127 l~~lA~~l~~~~g~~~eA~~~~e~Al~l~P 156 (167)
+.++|.++.. ++++++|+.+|++++++.|
T Consensus 172 ~~~la~~~~~-~g~~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 172 KNNLASCYLK-QGKYQDAETLYKEILTRAH 200 (283)
T ss_dssp HHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHHHHH
Confidence 9999999999 9999999999999999844
No 128
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.26 E-value=2.6e-12 Score=111.49 Aligned_cols=94 Identities=14% Similarity=-0.007 Sum_probs=83.0
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHHcCC
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL--IWQAHKD 140 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~--l~~~~g~ 140 (167)
.+|.+++++++|+.+|++|++++|+++.+++++|.++. ..+++++|+++|++|++++|+++.++.+++.+ +.. +++
T Consensus 48 ~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~-~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~-~g~ 125 (477)
T 1wao_1 48 LAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM-ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK-QKA 125 (477)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHH-HHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-HHH
Confidence 56788999999999999999999999999999999987 89999999999999999999999999999988 777 899
Q ss_pred HHHHHHHHH-----------HHHHhCCCC
Q 046296 141 ASRAESYFD-----------QAVKSAPDD 158 (167)
Q Consensus 141 ~~eA~~~~e-----------~Al~l~P~~ 158 (167)
+++|+++++ ++++++|+.
T Consensus 126 ~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 126 FERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHHHhccccccchhHhhhhhhhccccccc
Confidence 999999999 888888764
No 129
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.24 E-value=1.8e-11 Score=95.84 Aligned_cols=93 Identities=20% Similarity=0.242 Sum_probs=84.6
Q ss_pred chhhcCCChHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------------
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEA--------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA--------------- 119 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l--------~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l--------------- 119 (167)
.+|...+++++|+.+|++++++ .|..+.++..++.++. ..+++++|+.+|++++++
T Consensus 161 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 239 (311)
T 3nf1_A 161 LLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYL-KQGKFKQAETLYKEILTRAHEREFGSVDDENKP 239 (311)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHC------CC
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHH
Confidence 4677889999999999999999 7788889999999987 899999999999999984
Q ss_pred ----------------------------------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 046296 120 ----------------------------------NPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPD 157 (167)
Q Consensus 120 ----------------------------------~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~ 157 (167)
+|..+.++..+|.++.. +|++++|+++|++|+++.|.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 240 IWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp HHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHhhc
Confidence 57778899999999999 99999999999999999885
No 130
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.24 E-value=2e-12 Score=111.31 Aligned_cols=99 Identities=11% Similarity=0.027 Sum_probs=91.4
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGD---------------GNILS 128 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~---------------~~al~ 128 (167)
++....++++|+.+|+++++.+|+++.++.++|.+++ ..+++++|+.+|++||+++|++ ..++.
T Consensus 243 y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~-~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~ 321 (457)
T 1kt0_A 243 YEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYF-KGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFL 321 (457)
T ss_dssp EEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHH
T ss_pred EEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHH
Confidence 3345578889999999999999999999999999997 8999999999999999999999 79999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 129 LYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 129 ~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
++|.+++. ++++++|+.+|++||+++|+++.++.+
T Consensus 322 nla~~~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~ 356 (457)
T 1kt0_A 322 NLAMCYLK-LREYTKAVECCDKALGLDSANEKGLYR 356 (457)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHH-hcCHHHHHHHHHHHHhcCCccHHHHHH
Confidence 99999999 999999999999999999999877654
No 131
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.23 E-value=3.2e-11 Score=91.06 Aligned_cols=90 Identities=18% Similarity=0.124 Sum_probs=74.9
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|...+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+.+|+++++++|+++.++..++.++.. .+++.
T Consensus 96 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~~ 173 (198)
T 2fbn_A 96 TCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANM-YFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK-LKEAR 173 (198)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-HHHHH
Confidence 46778899999999999999999999999999999987 89999999999999999999999999999999998 88888
Q ss_pred HHH-HHHHHHHHh
Q 046296 143 RAE-SYFDQAVKS 154 (167)
Q Consensus 143 eA~-~~~e~Al~l 154 (167)
++. ..|.+.+..
T Consensus 174 ~~~~~~~~~~f~~ 186 (198)
T 2fbn_A 174 KKDKLTFGGMFDK 186 (198)
T ss_dssp C------------
T ss_pred HHHHHHHHHHhcc
Confidence 877 555555544
No 132
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.22 E-value=9e-11 Score=88.65 Aligned_cols=93 Identities=13% Similarity=0.018 Sum_probs=85.2
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHH
Q 046296 69 HGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRG---DFAKAEELCGRAILAN-P-GDGNILSLYADLIWQAHKDASR 143 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~g---d~e~A~~~~~rAl~l~-P-~~~~al~~lA~~l~~~~g~~~e 143 (167)
.....+.+.|.+.++.+|.++.+.++||++|. ... ++++++.+++..++.+ | ++.+.++++|..+++ .++|++
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv-~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~k-l~~Y~~ 89 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLV-RSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH-TCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH-TSCHHH
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH-ccCHHH
Confidence 46788999999999999999999999999997 666 6789999999999999 8 679999999999999 999999
Q ss_pred HHHHHHHHHHhCCCCHHHHH
Q 046296 144 AESYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 144 A~~~~e~Al~l~P~~~~~l~ 163 (167)
|+++++++|+++|+|..+..
T Consensus 90 A~~y~~~lL~ieP~n~QA~~ 109 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQNNQAKE 109 (152)
T ss_dssp HHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHH
Confidence 99999999999999987653
No 133
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.22 E-value=5.9e-11 Score=82.00 Aligned_cols=78 Identities=22% Similarity=0.206 Sum_probs=72.7
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 85 NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 85 ~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
.|.++.+++.+|.++. ..+++++|+.+|+++++++|+++.++..+|.+++. .+++++|+.+|+++++++|+++.++.+
T Consensus 12 ~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~ 89 (133)
T 2lni_A 12 NPDLALMVKNKGNECF-QKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTK-LLEFQLALKDCEECIQLEPTFIKGYTR 89 (133)
T ss_dssp SSCHHHHHHHHHHHHH-HTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTT-TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCCchHHHHH
Confidence 5778899999999887 89999999999999999999999999999999999 999999999999999999999877644
No 134
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.22 E-value=2.2e-10 Score=77.72 Aligned_cols=79 Identities=20% Similarity=0.324 Sum_probs=69.7
Q ss_pred hCCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 84 ANPGN-ALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 84 l~P~n-~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l 162 (167)
++|.+ +.+++.++.++. ..+++++|+++|+++++.+|+++.++..++.++.. .+++++|+.+|++++++.|.++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~ 80 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNNAEAW 80 (125)
T ss_dssp ----CHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCccccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhCCccHHHH
Confidence 46766 788999999886 79999999999999999999999999999999999 9999999999999999999998765
Q ss_pred Hh
Q 046296 163 IK 164 (167)
Q Consensus 163 ~~ 164 (167)
.+
T Consensus 81 ~~ 82 (125)
T 1na0_A 81 YN 82 (125)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 135
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.21 E-value=1.2e-10 Score=78.15 Aligned_cols=68 Identities=16% Similarity=0.126 Sum_probs=63.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 93 GNYARFLKEVRGDFAKAEELCGRAILANPGDGN-ILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 93 ~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~-al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l 162 (167)
++.|..+. ..+++++|+.+|+++++++|+++. ++..+|.+++. ++++++|+++|+++++++|+++.++
T Consensus 4 ~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 4 LKTIKELI-NQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRK-LGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHH-HHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 45677776 799999999999999999999999 99999999999 9999999999999999999998776
No 136
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.21 E-value=8.1e-11 Score=80.51 Aligned_cols=77 Identities=13% Similarity=0.061 Sum_probs=71.8
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDA 141 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~ 141 (167)
.+|...+++++|+.+|+++++++|+++.++..++.++. ..+++++|+.+|+++++++|+++.++..++.++.. .+++
T Consensus 54 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~-~~~~ 130 (131)
T 2vyi_A 54 AAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALS-SLNKHVEAVAYYKKALELDPDNETYKSNLKIAELK-LREA 130 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-HTTC
T ss_pred HHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHH-HhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHH-HhcC
Confidence 46778899999999999999999999999999999987 89999999999999999999999999999999988 7764
No 137
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.20 E-value=8.1e-11 Score=101.59 Aligned_cols=101 Identities=13% Similarity=0.126 Sum_probs=70.8
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNA-LLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~-~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
++.+.+++++|...|+++++++|.++ .+|.+++.++. ..+++++|+++|++|++..|.+..++...+.+.+...++++
T Consensus 330 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~ 408 (530)
T 2ooe_A 330 YEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR-RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKS 408 (530)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHH
T ss_pred HHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHH-HhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChh
Confidence 45667888999999999999988886 58888887765 56667777777777777666666555555544332267777
Q ss_pred HHHHHHHHHHHhCCCCHHHHHhc
Q 046296 143 RAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
+|+++|+++|++.|+++.++.+|
T Consensus 409 ~A~~~~e~al~~~p~~~~~~~~~ 431 (530)
T 2ooe_A 409 VAFKIFELGLKKYGDIPEYVLAY 431 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHH
Confidence 77777777777777776665443
No 138
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.20 E-value=4.3e-11 Score=98.26 Aligned_cols=91 Identities=12% Similarity=0.092 Sum_probs=83.8
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNA----LLLGNYARFLKEVRGDFAKAEELCGRAILA------NPGDGNILSLYAD 132 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~----~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l------~P~~~~al~~lA~ 132 (167)
..|...+++++|+.+|+++++++|+++ .++..++.++. ..+++++|+.+|++++++ .|..+.++..+|.
T Consensus 56 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~ 134 (411)
T 4a1s_A 56 ERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGN 134 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHH
Confidence 456788999999999999999999998 57889999887 799999999999999998 6888899999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhC
Q 046296 133 LIWQAHKDASRAESYFDQAVKSA 155 (167)
Q Consensus 133 ~l~~~~g~~~eA~~~~e~Al~l~ 155 (167)
++.. ++++++|+.+|++++++.
T Consensus 135 ~~~~-~g~~~~A~~~~~~al~~~ 156 (411)
T 4a1s_A 135 TLKV-MGRFDEAAICCERHLTLA 156 (411)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHH-CCCHHHHHHHHHHHHHHH
Confidence 9999 999999999999999983
No 139
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.19 E-value=2.8e-10 Score=76.59 Aligned_cols=75 Identities=16% Similarity=0.022 Sum_probs=69.2
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 88 NALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 88 n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
.+..++.++..+. ..+++++|+.+|++++..+|+++.++..+|.+++. ++++++|+.+++++++++|+++.++.+
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~ 77 (118)
T 1elw_A 3 QVNELKEKGNKAL-SVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAK-KGDYQKAYEDGCKTVDLKPDWGKGYSR 77 (118)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhCcccHHHHHH
Confidence 4677888998886 79999999999999999999999999999999999 999999999999999999999876644
No 140
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.18 E-value=8e-11 Score=82.09 Aligned_cols=70 Identities=19% Similarity=0.131 Sum_probs=63.2
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL 133 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~ 133 (167)
.+|...+++++|+.+|+++++++|+++.++++++.++. ..+++++|+.+|+++++++|+++.+......+
T Consensus 35 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ai 104 (117)
T 3k9i_A 35 STFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLY-NLGRYEQGVELLLKIIAETSDDETIQSYKQAI 104 (117)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHCCCHHHHHTHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 46888999999999999999999999999999999997 89999999999999999999999876544333
No 141
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=2.2e-10 Score=80.67 Aligned_cols=81 Identities=16% Similarity=0.084 Sum_probs=74.6
Q ss_pred HHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 82 IEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGD---GNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 158 (167)
Q Consensus 82 L~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~---~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~ 158 (167)
+..+|.++..++.++..+. ..+++++|+.+|+++++++|++ +.++..++.+++. ++++++|+.+|+++++++|++
T Consensus 21 ~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~ 98 (148)
T 2dba_A 21 ATPGASSVEQLRKEGNELF-KCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIEKDGGD 98 (148)
T ss_dssp CCTTCCCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTSCC
T ss_pred CccchHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhhCccC
Confidence 3567899999999999887 7999999999999999999998 8999999999999 999999999999999999999
Q ss_pred HHHHHh
Q 046296 159 WLNLIK 164 (167)
Q Consensus 159 ~~~l~~ 164 (167)
+.++.+
T Consensus 99 ~~~~~~ 104 (148)
T 2dba_A 99 VKALYR 104 (148)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876644
No 142
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.16 E-value=6.7e-11 Score=95.79 Aligned_cols=93 Identities=13% Similarity=0.016 Sum_probs=68.4
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPGD------GNILSLY 130 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n------~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~------~~al~~l 130 (167)
.+|.. +++++|+.+|++|+++.|.. ..++.+++.++. ..+++++|+.+|++++++.|.+ ..++..+
T Consensus 124 ~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 201 (307)
T 2ifu_A 124 KLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLV-RQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQ 201 (307)
T ss_dssp HHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Confidence 34555 78888888888888877654 567777887775 6888888888888888876543 2356667
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 046296 131 ADLIWQAHKDASRAESYFDQAVKSAPDDW 159 (167)
Q Consensus 131 A~~l~~~~g~~~eA~~~~e~Al~l~P~~~ 159 (167)
+.+++. ++++++|+.+|++++ ++|+..
T Consensus 202 g~~~~~-~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 202 VLVQLH-RADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHH-cCCHHHHHHHHHHHh-CCCCCC
Confidence 777777 788888888888888 877643
No 143
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.16 E-value=9.4e-11 Score=94.47 Aligned_cols=86 Identities=14% Similarity=0.135 Sum_probs=78.9
Q ss_pred cCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHcCCHHHH
Q 046296 67 NNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGD--GNILSLYADLIWQAHKDASRA 144 (167)
Q Consensus 67 ~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~--~~al~~lA~~l~~~~g~~~eA 144 (167)
.+++.++|+..|+++++++|+++.+++++|.++. ..+++++|+..|+++++++|++ +.++.+++.++.. .|+.++|
T Consensus 197 ~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~-~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~-~g~~~~a 274 (287)
T 3qou_A 197 XQAADTPEIQQLQQQVAENPEDAALATQLALQLH-QVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAA-LGTGDAL 274 (287)
T ss_dssp HHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHH-HCTTCHH
T ss_pred hhcccCccHHHHHHHHhcCCccHHHHHHHHHHHH-HcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHH-cCCCCcH
Confidence 3455666888899999999999999999999987 8999999999999999999998 8999999999998 9999999
Q ss_pred HHHHHHHHHh
Q 046296 145 ESYFDQAVKS 154 (167)
Q Consensus 145 ~~~~e~Al~l 154 (167)
+..|+++|..
T Consensus 275 ~~~~r~al~~ 284 (287)
T 3qou_A 275 ASXYRRQLYA 284 (287)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999864
No 144
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.16 E-value=8.4e-11 Score=82.81 Aligned_cols=92 Identities=13% Similarity=0.038 Sum_probs=78.9
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNA------LLLGNYARFLKEVRGDFAKAEELCGRAILANPGD------GNILSLY 130 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~------~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~------~~al~~l 130 (167)
.+|...+++++|+.+|++++++.|... .++.+++.++. ..+++++|+.++++++++.|.. +.++.++
T Consensus 17 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l 95 (164)
T 3ro3_A 17 NTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSL 95 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 467788999999999999999876532 47888998886 7999999999999999986653 6788899
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC
Q 046296 131 ADLIWQAHKDASRAESYFDQAVKSAP 156 (167)
Q Consensus 131 A~~l~~~~g~~~eA~~~~e~Al~l~P 156 (167)
|.+++. ++++++|+.++++++++.+
T Consensus 96 ~~~~~~-~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 96 GNTYTL-LQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HhhHHHHHHHHHHHHHHHH
Confidence 999999 9999999999999998743
No 145
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.16 E-value=1.2e-10 Score=91.08 Aligned_cols=93 Identities=9% Similarity=0.061 Sum_probs=83.9
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNA----LLLGNYARFLKEVRGDFAKAEELCGRAILA------NPGDGNILSLYAD 132 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~----~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l------~P~~~~al~~lA~ 132 (167)
..+...+++++|+.+|+++++++|+++ .++..++.++. ..+++++|+.++++++++ .|..+.++..++.
T Consensus 13 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~ 91 (338)
T 3ro2_A 13 ERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGN 91 (338)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHH
Confidence 467788999999999999999999995 67788998886 899999999999999988 5666889999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC
Q 046296 133 LIWQAHKDASRAESYFDQAVKSAPD 157 (167)
Q Consensus 133 ~l~~~~g~~~eA~~~~e~Al~l~P~ 157 (167)
++.. .+++++|+.+|++++++.|.
T Consensus 92 ~~~~-~g~~~~A~~~~~~al~~~~~ 115 (338)
T 3ro2_A 92 TLKV-LGNFDEAIVCCQRHLDISRE 115 (338)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHH-ccCHHHHHHHHHHHHHHHHH
Confidence 9999 99999999999999998664
No 146
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.15 E-value=5.1e-10 Score=89.56 Aligned_cols=92 Identities=10% Similarity=0.040 Sum_probs=80.1
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCCH----HHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAI---LANPGDG----NILSL 129 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n------~~~l~~lA~~l~~~~gd~e~A~~~~~rAl---~l~P~~~----~al~~ 129 (167)
.+|...+++++|+.+|++++++.+.. ..+++++|.++. ..+++++|+.+|++|+ +..|++. .++.+
T Consensus 123 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~n 201 (293)
T 2qfc_A 123 AYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYN 201 (293)
T ss_dssp HHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHh
Confidence 35667789999999999999887654 568899999887 7999999999999999 5567654 68899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 046296 130 YADLIWQAHKDASRAESYFDQAVKSAP 156 (167)
Q Consensus 130 lA~~l~~~~g~~~eA~~~~e~Al~l~P 156 (167)
+|.+++. ++++++|+.+|++|+++.+
T Consensus 202 lg~~y~~-~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 202 HAKALYL-DSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HhhHHHHHHHHHHHHHHHH
Confidence 9999999 9999999999999999864
No 147
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.15 E-value=9.3e-10 Score=86.23 Aligned_cols=87 Identities=17% Similarity=0.169 Sum_probs=60.5
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEV----RGDFAKAEELCGRAILANPGDGNILSLYADLIWQ--- 136 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~----~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~--- 136 (167)
.|...+++++|+.+|+++++ |+++.++++++.++. . .+++++|+.+|++|++++ ++.++.++|.++..
T Consensus 15 ~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~-~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~ 89 (273)
T 1ouv_A 15 KSYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYY-QGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQG 89 (273)
T ss_dssp HHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSS
T ss_pred HHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHH-cCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCC
Confidence 45566677777777777776 667777777777665 6 677777777777777664 67777777776653
Q ss_pred HcCCHHHHHHHHHHHHHhC
Q 046296 137 AHKDASRAESYFDQAVKSA 155 (167)
Q Consensus 137 ~~g~~~eA~~~~e~Al~l~ 155 (167)
..+++++|+.+|++|++++
T Consensus 90 ~~~~~~~A~~~~~~a~~~~ 108 (273)
T 1ouv_A 90 VSQNTNKALQYYSKACDLK 108 (273)
T ss_dssp SCCCHHHHHHHHHHHHHTT
T ss_pred cccCHHHHHHHHHHHHHcC
Confidence 1567777777777777663
No 148
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.15 E-value=4.9e-11 Score=93.33 Aligned_cols=90 Identities=22% Similarity=0.297 Sum_probs=81.6
Q ss_pred chhhcCCChHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEA--------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILAN--------PGDGNI 126 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l--------~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~--------P~~~~a 126 (167)
.+|...+++++|+.+|++++++ .|..+.++.+++.++. ..+++++|+.+|++++++. |....+
T Consensus 77 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 155 (311)
T 3nf1_A 77 LVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQ 155 (311)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-HcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Confidence 4677889999999999999998 4667788999999887 7999999999999999984 667788
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 127 LSLYADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 127 l~~lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
+..+|.++.. .+++++|+.+|++++++
T Consensus 156 ~~~la~~~~~-~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 156 LNNLALLCQN-QGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHHHHHHHHT-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 9999999999 99999999999999998
No 149
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.14 E-value=1.6e-10 Score=81.39 Aligned_cols=93 Identities=11% Similarity=0.046 Sum_probs=80.3
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAILANP------GDGNILSLY 130 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n------~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P------~~~~al~~l 130 (167)
.+|...+++++|+.+|++++++.|.. +.++.+++.++. ..+++++|+.++++++++.+ ..+.++..+
T Consensus 57 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l 135 (164)
T 3ro3_A 57 NAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT-LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSL 135 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHH
Confidence 46788899999999999999987654 667889999886 79999999999999998743 235678899
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 046296 131 ADLIWQAHKDASRAESYFDQAVKSAPD 157 (167)
Q Consensus 131 A~~l~~~~g~~~eA~~~~e~Al~l~P~ 157 (167)
+.+++. ++++++|+.++++++++...
T Consensus 136 a~~~~~-~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 136 GNAYTA-LGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHH-HTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHH-ccCHHHHHHHHHHHHHHHHH
Confidence 999999 99999999999999998654
No 150
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.14 E-value=3.1e-10 Score=97.95 Aligned_cols=92 Identities=17% Similarity=0.138 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH------cCCHH-------HHHHHHHHHHH-hCCCCHHHHHHHHHHHHHH
Q 046296 72 SSTDAYNEKMIEANPGNALLLGNYARFLKEV------RGDFA-------KAEELCGRAIL-ANPGDGNILSLYADLIWQA 137 (167)
Q Consensus 72 d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~------~gd~e-------~A~~~~~rAl~-l~P~~~~al~~lA~~l~~~ 137 (167)
.+|+..|+++|+.+|+++.+|..++.++... .++++ +|+..|++|++ ++|+++.+|..++.++..
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~- 333 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEES- 333 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHh-
Confidence 4788899999999999999999999987521 68876 89999999997 899999999999999998
Q ss_pred cCCHHHHHHHHHHHHHhCCCCH-HHHHh
Q 046296 138 HKDASRAESYFDQAVKSAPDDW-LNLIK 164 (167)
Q Consensus 138 ~g~~~eA~~~~e~Al~l~P~~~-~~l~~ 164 (167)
.+++++|+.+|++++++.|.++ .++.+
T Consensus 334 ~g~~~~A~~~~~~al~~~p~~~~~~~~~ 361 (530)
T 2ooe_A 334 RMKYEKVHSIYNRLLAIEDIDPTLVYIQ 361 (530)
T ss_dssp TTCHHHHHHHHHHHHHSSSSCHHHHHHH
T ss_pred cCCHHHHHHHHHHHhCccccCchHHHHH
Confidence 9999999999999999999886 35544
No 151
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.13 E-value=8.3e-11 Score=94.19 Aligned_cols=94 Identities=10% Similarity=0.015 Sum_probs=78.2
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCCHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGN------ALLLGNYARFLKEVRGDFAKAEELCGRAILA-------NPGDGNILSL 129 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n------~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l-------~P~~~~al~~ 129 (167)
.+|...+++++|+.+|++++++.+.. ..+++++|.++. ..+++++|+.+|++|++. .|..+.++++
T Consensus 123 ~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~n 201 (293)
T 3u3w_A 123 AYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYN 201 (293)
T ss_dssp HHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred HHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHH
Confidence 35566789999999999999976543 337899999887 799999999999999953 2334568899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 130 YADLIWQAHKDASRAESYFDQAVKSAPDD 158 (167)
Q Consensus 130 lA~~l~~~~g~~~eA~~~~e~Al~l~P~~ 158 (167)
+|.+++. ++++++|+.++++|+++.+..
T Consensus 202 lg~~y~~-~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 202 HAKALYL-DSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHH-HhHHHHHHHHHHHHHHHHHHc
Confidence 9999999 999999999999999986543
No 152
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.13 E-value=1.2e-10 Score=95.94 Aligned_cols=92 Identities=12% Similarity=0.067 Sum_probs=83.2
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hC-CCCHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNA------LLLGNYARFLKEVRGDFAKAEELCGRAIL-----AN-PGDGNILSLY 130 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~------~~l~~lA~~l~~~~gd~e~A~~~~~rAl~-----l~-P~~~~al~~l 130 (167)
.+|...+++++|+.+|++|+++.|... .++.++|.++. ..+++++|+.+|++|++ .+ |..+.++.++
T Consensus 192 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l 270 (383)
T 3ulq_A 192 TNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKN-SQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLI 270 (383)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Confidence 578888999999999999999866543 58899999887 89999999999999999 56 8889999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC
Q 046296 131 ADLIWQAHKDASRAESYFDQAVKSAP 156 (167)
Q Consensus 131 A~~l~~~~g~~~eA~~~~e~Al~l~P 156 (167)
|.+++. ++++++|+.+|++|+++.+
T Consensus 271 ~~~~~~-~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 271 TQIHYK-LGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 999999 9999999999999999854
No 153
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.13 E-value=4.1e-10 Score=90.55 Aligned_cols=78 Identities=19% Similarity=0.076 Sum_probs=73.2
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 86 PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 86 P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
|.++.++..+|..+. ..+++++|+.+|++|++++|+++.++.++|.++.. ++++++|+.+|++|++++|+++.++.++
T Consensus 1 p~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l 78 (281)
T 2c2l_A 1 SPSAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQSVKAHFFL 78 (281)
T ss_dssp CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHTTSCTTCHHHHHHH
T ss_pred ChhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 678899999999987 89999999999999999999999999999999999 9999999999999999999998776543
No 154
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.13 E-value=7.9e-10 Score=91.68 Aligned_cols=93 Identities=15% Similarity=0.054 Sum_probs=85.8
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH----HHHc---C
Q 046296 69 HGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRG--DFAKAEELCGRAILANPGDGNILSLYADLI----WQAH---K 139 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~g--d~e~A~~~~~rAl~l~P~~~~al~~lA~~l----~~~~---g 139 (167)
...++|+.++.++|+++|++..+|+..+.++. ..+ ++++++++++++|.++|++..+|+....++ .. . .
T Consensus 47 e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~-~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~-l~~~~ 124 (306)
T 3dra_A 47 EYSERALHITELGINELASHYTIWIYRFNILK-NLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMEL-NNNDF 124 (306)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHH-TTTCC
T ss_pred CCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHH-HcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHh-ccccC
Confidence 44579999999999999999999999999987 677 999999999999999999999999999999 55 5 7
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHH
Q 046296 140 DASRAESYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 140 ~~~eA~~~~e~Al~l~P~~~~~l~ 163 (167)
++++++.+++++++++|.|..++.
T Consensus 125 ~~~~EL~~~~~~l~~~pkny~aW~ 148 (306)
T 3dra_A 125 DPYREFDILEAMLSSDPKNHHVWS 148 (306)
T ss_dssp CTHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHH
Confidence 899999999999999999988763
No 155
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.12 E-value=5.1e-11 Score=96.49 Aligned_cols=93 Identities=13% Similarity=0.117 Sum_probs=79.5
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCC--C----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPG--N----ALLLGNYARFLKEVRGDFAKAEELCGRAILANPGD------GNILSLY 130 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~--n----~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~------~~al~~l 130 (167)
.+|...+++++|+.+|++|+++.+. + ..++.+++.++. . +++++|+.+|++|+++.|.. +.++.++
T Consensus 84 ~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~l 161 (307)
T 2ifu_A 84 MMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLME-P-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKA 161 (307)
T ss_dssp HHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT-T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-c-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHH
Confidence 4677788999999999999998543 2 467888998885 5 99999999999999998754 6788899
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 131 ADLIWQAHKDASRAESYFDQAVKSAPDD 158 (167)
Q Consensus 131 A~~l~~~~g~~~eA~~~~e~Al~l~P~~ 158 (167)
|.++.. ++++++|+.+|++++++.|.+
T Consensus 162 g~~~~~-~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 162 SRLLVR-QQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHH-cCCHHHHHHHHHHHHHHHHHc
Confidence 999999 999999999999999987654
No 156
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.12 E-value=2.1e-10 Score=93.01 Aligned_cols=93 Identities=9% Similarity=0.061 Sum_probs=83.9
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNA----LLLGNYARFLKEVRGDFAKAEELCGRAILA------NPGDGNILSLYAD 132 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~----~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l------~P~~~~al~~lA~ 132 (167)
..+...+++++|+.+|++++++.|+++ .++..++.++. ..+++++|+.+|++|+.+ .|..+.++..+|.
T Consensus 17 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~ 95 (406)
T 3sf4_A 17 ERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGN 95 (406)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 467788999999999999999999995 57888998887 799999999999999988 4566788999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC
Q 046296 133 LIWQAHKDASRAESYFDQAVKSAPD 157 (167)
Q Consensus 133 ~l~~~~g~~~eA~~~~e~Al~l~P~ 157 (167)
+++. .+++++|+.+|++++++.|.
T Consensus 96 ~~~~-~g~~~~A~~~~~~al~~~~~ 119 (406)
T 3sf4_A 96 TLKV-LGNFDEAIVCCQRHLDISRE 119 (406)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHH-cCCHHHHHHHHHHHHHHHHh
Confidence 9999 99999999999999998764
No 157
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.11 E-value=1.1e-10 Score=93.56 Aligned_cols=91 Identities=12% Similarity=0.051 Sum_probs=78.7
Q ss_pred chhhcCCChHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEA-------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGD------GNILSL 129 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l-------~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~------~~al~~ 129 (167)
.+|...+++++|+.+|+++++. .|..+.++++++.++. ..+++++|+.++++|+++.+.. +.++.+
T Consensus 163 ~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~-~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 241 (293)
T 3u3w_A 163 NIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY-LDSRYEESLYQVNKAIEISCRINSMALIGQLYYQ 241 (293)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 4688899999999999999953 2223468899999987 8999999999999999987654 889999
Q ss_pred HHHHHHHHcC-CHHHHHHHHHHHHHhC
Q 046296 130 YADLIWQAHK-DASRAESYFDQAVKSA 155 (167)
Q Consensus 130 lA~~l~~~~g-~~~eA~~~~e~Al~l~ 155 (167)
+|.++.. ++ ++++|+.+|++|+.+.
T Consensus 242 lg~~~~~-~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 242 RGECLRK-LEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHH-TTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-hCCcHHHHHHHHHHHHHHH
Confidence 9999999 99 5799999999999863
No 158
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.11 E-value=2.9e-10 Score=77.88 Aligned_cols=71 Identities=14% Similarity=0.175 Sum_probs=65.8
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 86 PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 158 (167)
Q Consensus 86 P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~ 158 (167)
|..+..++.+|.++. ..+++++|+.+|+++++++|.++.++..+|.+++. ++++++|+.+|++++++.|++
T Consensus 1 ~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 1 GKQALKEKELGNDAY-KKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFE-KGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp CHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHS
T ss_pred ChHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH-hccHHHHHHHHHHHHhhcccc
Confidence 345678889999886 79999999999999999999999999999999999 999999999999999998876
No 159
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.11 E-value=1.5e-10 Score=84.71 Aligned_cols=73 Identities=11% Similarity=-0.015 Sum_probs=66.5
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDG-NILSLYADLIWQ 136 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~-~al~~lA~~l~~ 136 (167)
.+|...+++++|+.+|+++|+++|+++.+++.+|.++. ..+++++|+..|++|++++|+++ .+...+..+...
T Consensus 71 ~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~ 144 (162)
T 3rkv_A 71 QCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARI-AAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTER 144 (162)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred HHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHH-HHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 46788899999999999999999999999999999997 89999999999999999999999 667777776655
No 160
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.11 E-value=1.4e-10 Score=95.62 Aligned_cols=98 Identities=11% Similarity=-0.013 Sum_probs=83.2
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH------HHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGN-------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDG------NILSL 129 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n-------~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~------~al~~ 129 (167)
.+|...+++++|+.+|++|+++.+.. +.++.++|.++. ..+++++|+.+|++|+++.|... .++.+
T Consensus 151 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 229 (383)
T 3ulq_A 151 ESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFL-DLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYN 229 (383)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 56788899999999999999985543 458889999887 89999999999999999866443 58899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh-----C-CCCHHHH
Q 046296 130 YADLIWQAHKDASRAESYFDQAVKS-----A-PDDWLNL 162 (167)
Q Consensus 130 lA~~l~~~~g~~~eA~~~~e~Al~l-----~-P~~~~~l 162 (167)
+|.++.. ++++++|+.+|++|+++ + |..+.++
T Consensus 230 lg~~y~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 267 (383)
T 3ulq_A 230 IGLCKNS-QSQYEDAIPYFKRAIAVFEESNILPSLPQAY 267 (383)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred HHHHHHH-CCCHHHHHHHHHHHHHHHHhhccchhHHHHH
Confidence 9999999 99999999999999994 5 5555444
No 161
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.10 E-value=2.1e-10 Score=85.14 Aligned_cols=91 Identities=10% Similarity=0.012 Sum_probs=74.8
Q ss_pred chhhcCCChHHHHHHHHHHHH------hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCC----CHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIE------ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA---NPG----DGNILSL 129 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~------l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l---~P~----~~~al~~ 129 (167)
.+|...+++++|+.+|+++++ ..|..+.++.+++.++. ..+++++|+.++++++++ .|+ .+.++.+
T Consensus 34 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 112 (203)
T 3gw4_A 34 YVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVER-MAGNWDAARRCFLEERELLASLPEDPLAASANAYE 112 (203)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHH
Confidence 467778899999999999998 45556778888888886 789999999999999988 443 3566788
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC
Q 046296 130 YADLIWQAHKDASRAESYFDQAVKSA 155 (167)
Q Consensus 130 lA~~l~~~~g~~~eA~~~~e~Al~l~ 155 (167)
+|.+++. ++++++|+.++++++++.
T Consensus 113 lg~~~~~-~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 113 VATVALH-FGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-hCCHHHHHHHHHHHHHHH
Confidence 8999988 999999999999998763
No 162
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.10 E-value=9.9e-10 Score=97.66 Aligned_cols=92 Identities=12% Similarity=0.040 Sum_probs=76.0
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGD----------FAKAEELCGRAILANPGDGNILSLYADLIWQAHK 139 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd----------~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g 139 (167)
..++|+.++.++|+++|++..+|+..+.++. ..++ +++|+++++++++.+|++..+|++.++++.. .+
T Consensus 44 ~~eeal~~~~~~l~~nP~~~taW~~R~~~l~-~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~-l~ 121 (567)
T 1dce_A 44 LDESVLELTSQILGANPDFATLWNCRREVLQ-HLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSR-LP 121 (567)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-CS
T ss_pred CCHHHHHHHHHHHHHCchhHHHHHHHHHHHH-hcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cc
Confidence 4567888888888888888888888888776 5555 8888888888888888888888888888887 88
Q ss_pred --CHHHHHHHHHHHHHhCCCCHHHHH
Q 046296 140 --DASRAESYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 140 --~~~eA~~~~e~Al~l~P~~~~~l~ 163 (167)
++++|+++++++++++|.|..++.
T Consensus 122 ~~~~~~el~~~~k~l~~d~~N~~aW~ 147 (567)
T 1dce_A 122 EPNWARELELCARFLEADERNFHCWD 147 (567)
T ss_dssp SCCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cccHHHHHHHHHHHHhhccccccHHH
Confidence 668888888888888888877664
No 163
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.10 E-value=4.7e-10 Score=89.77 Aligned_cols=92 Identities=15% Similarity=0.052 Sum_probs=80.6
Q ss_pred cchhhcCCChHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHH
Q 046296 62 NNYSNNNHGSSSTDAYNEKMI---EANPGNA----LLLGNYARFLKEVRGDFAKAEELCGRAILANPG------DGNILS 128 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL---~l~P~n~----~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~------~~~al~ 128 (167)
+.+|...+++++|+.+|++|+ +..|+++ .+++++|.++. ..+++++|+.+|++|+++.++ -+.++.
T Consensus 162 g~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~-~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~ 240 (293)
T 2qfc_A 162 ANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY-LDSRYEESLYQVNKAIEISCRINSMALIGQLYY 240 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHH-HHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 357888999999999999999 6677754 68899999987 899999999999999998653 278899
Q ss_pred HHHHHHHHHcCCHHHH-HHHHHHHHHhC
Q 046296 129 LYADLIWQAHKDASRA-ESYFDQAVKSA 155 (167)
Q Consensus 129 ~lA~~l~~~~g~~~eA-~~~~e~Al~l~ 155 (167)
++|.++.. ++++++| ..+|++|+.+.
T Consensus 241 ~lg~~y~~-~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 241 QRGECLRK-LEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHH-TTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCcHHHHHHHHHHHHHHH
Confidence 99999999 9999999 88899998763
No 164
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=99.10 E-value=3.2e-10 Score=93.98 Aligned_cols=88 Identities=14% Similarity=0.168 Sum_probs=79.8
Q ss_pred CChHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHcCC
Q 046296 69 HGSSSTDAYNEKMIEANPG--NALLLGNYARFLKEV-----RGDFAKAEELCGRAILANPGD-GNILSLYADLIWQAHKD 140 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~--n~~~l~~lA~~l~~~-----~gd~e~A~~~~~rAl~l~P~~-~~al~~lA~~l~~~~g~ 140 (167)
....+|+..+++||+++|+ +..+|..++.++. . -|+.++|+++|+|||+++|+. ..+++.||..+...+++
T Consensus 177 ~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~-~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd 255 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYA-AAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNN 255 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH-HSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTC
T ss_pred HhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHH-hCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCC
Confidence 5688999999999999999 7779999998776 5 399999999999999999975 99999999999873499
Q ss_pred HHHHHHHHHHHHHhCCC
Q 046296 141 ASRAESYFDQAVKSAPD 157 (167)
Q Consensus 141 ~~eA~~~~e~Al~l~P~ 157 (167)
+++|.+++++|++++|.
T Consensus 256 ~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 256 RAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 99999999999999887
No 165
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.08 E-value=4e-10 Score=94.86 Aligned_cols=83 Identities=14% Similarity=0.015 Sum_probs=77.2
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+|.+.+++++|+.+|++||+++|+++.+++++|.++. ..+++++|+.+|++|++++|+++.++..++.++.. +++++
T Consensus 281 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~-~~~~~ 358 (370)
T 1ihg_A 281 ACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQ-GLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQK-IKAQK 358 (370)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHH
Confidence 46788899999999999999999999999999999987 89999999999999999999999999999999988 88888
Q ss_pred HHHHH
Q 046296 143 RAESY 147 (167)
Q Consensus 143 eA~~~ 147 (167)
+|.+.
T Consensus 359 ~a~k~ 363 (370)
T 1ihg_A 359 DKEKA 363 (370)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 77654
No 166
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.08 E-value=7.6e-10 Score=84.09 Aligned_cols=72 Identities=21% Similarity=0.135 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--
Q 046296 89 ALLLGNYARFLKEVRGDFAKAEELCGRAILANPG-------DGN-----ILSLYADLIWQAHKDASRAESYFDQAVKS-- 154 (167)
Q Consensus 89 ~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~-------~~~-----al~~lA~~l~~~~g~~~eA~~~~e~Al~l-- 154 (167)
+..+.+.+..++ ..+++++|+..|++||+++|+ +.. +|.++|.++.. +++|++|+..|++||++
T Consensus 11 a~~~~~~G~~l~-~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 11 AYLALSDAQRQL-VAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhhh
Confidence 456788898887 799999999999999999999 544 99999999999 99999999999999999
Q ss_pred -----CCCCHHHH
Q 046296 155 -----APDDWLNL 162 (167)
Q Consensus 155 -----~P~~~~~l 162 (167)
+|+++.+|
T Consensus 89 ~~~e~~pd~~~A~ 101 (159)
T 2hr2_A 89 RRGELNQDEGKLW 101 (159)
T ss_dssp HHCCTTSTHHHHH
T ss_pred ccccCCCchHHHH
Confidence 99998887
No 167
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.07 E-value=3.3e-10 Score=87.27 Aligned_cols=82 Identities=21% Similarity=0.136 Sum_probs=50.1
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHH---HcCC
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYARFLKEV----RGDFAKAEELCGRAILANP--GDGNILSLYADLIWQ---AHKD 140 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~----~gd~e~A~~~~~rAl~l~P--~~~~al~~lA~~l~~---~~g~ 140 (167)
++++|+.+|+++++ +.++.++++++.++. . .+++++|+.+|++|++..| .++.+++++|.++.. +.++
T Consensus 68 ~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~-~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d 144 (212)
T 3rjv_A 68 DYPQARQLAEKAVE--AGSKSGEIVLARVLV-NRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPED 144 (212)
T ss_dssp CHHHHHHHHHHHHH--TTCHHHHHHHHHHHT-CGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCC
T ss_pred CHHHHHHHHHHHHH--CCCHHHHHHHHHHHH-cCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCC
Confidence 56666666666633 456666666666553 3 4566666666666666665 346666666666654 1345
Q ss_pred HHHHHHHHHHHHHh
Q 046296 141 ASRAESYFDQAVKS 154 (167)
Q Consensus 141 ~~eA~~~~e~Al~l 154 (167)
+++|+.+|++|+++
T Consensus 145 ~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 145 DVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 66666666666666
No 168
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.07 E-value=8.1e-10 Score=76.65 Aligned_cols=71 Identities=20% Similarity=0.122 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHH
Q 046296 90 LLLGNYARFLKEVRGDFAKAEELCGRAILANPGDG---NILSLYADLIWQAHKDASRAESYFDQAVKSAPDD---WLNL 162 (167)
Q Consensus 90 ~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~---~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~---~~~l 162 (167)
.+++.+|..+. ..+++++|+.+|+++++.+|+++ .+++.+|.+++. ++++++|+.+|++++++.|++ +.++
T Consensus 3 ~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~~~p~~~~~~~~~ 79 (129)
T 2xev_A 3 RTAYNVAFDAL-KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVSRYPTHDKAAGGL 79 (129)
T ss_dssp CCHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTSTTHHHHH
T ss_pred HHHHHHHHHHH-HhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHCCCCcccHHHH
Confidence 35677888886 79999999999999999999998 899999999999 999999999999999999999 5544
No 169
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.07 E-value=5.5e-10 Score=86.02 Aligned_cols=89 Identities=10% Similarity=-0.019 Sum_probs=78.6
Q ss_pred CCChHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC--
Q 046296 68 NHGSSSTDAYNEKMIEANP--GNALLLGNYARFLKEV----RGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHK-- 139 (167)
Q Consensus 68 ~g~~d~A~~~~~kAL~l~P--~n~~~l~~lA~~l~~~----~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g-- 139 (167)
..++++|+.+|+++++..| .++.++++|+.++. . .+++++|+.+|++|+++ |.++.++++++.++..-.+
T Consensus 102 ~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~-~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~ 179 (212)
T 3rjv_A 102 ATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYA-SGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGF 179 (212)
T ss_dssp SCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHH-HTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTT
T ss_pred ccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCC
Confidence 5799999999999999998 46999999999886 6 77999999999999998 8888899999999986123
Q ss_pred ---CHHHHHHHHHHHHHhCCCC
Q 046296 140 ---DASRAESYFDQAVKSAPDD 158 (167)
Q Consensus 140 ---~~~eA~~~~e~Al~l~P~~ 158 (167)
++++|+.+|++|++..+..
T Consensus 180 ~~~d~~~A~~~~~~A~~~g~~~ 201 (212)
T 3rjv_A 180 IEPNKQKALHWLNVSCLEGFDT 201 (212)
T ss_dssp BCCCHHHHHHHHHHHHHHTCHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHH
Confidence 8999999999999986543
No 170
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.07 E-value=8.1e-10 Score=98.21 Aligned_cols=92 Identities=13% Similarity=0.120 Sum_probs=87.0
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-CHHHHHHH
Q 046296 71 SSSTDAYNEKMIEANPGNALLLGNYARFLKEVRG--DFAKAEELCGRAILANPGDGNILSLYADLIWQAHK-DASRAESY 147 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~g--d~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g-~~~eA~~~ 147 (167)
+++|+.+++++|+.+|++..+|+..+.++. ..+ ++++|+++++++++++|++..+|.+.+.++.. .+ .+++++++
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~-~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~-l~~~~~~el~~ 166 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLS-RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQ-AAVAPAEELAF 166 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHH-cCCChHHHHHH
Confidence 899999999999999999999999999886 788 77999999999999999999999999999998 88 99999999
Q ss_pred HHHHHHhCCCCHHHHHh
Q 046296 148 FDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 148 ~e~Al~l~P~~~~~l~~ 164 (167)
++++|+++|+|..++.+
T Consensus 167 ~~~~I~~~p~n~saW~~ 183 (567)
T 1dce_A 167 TDSLITRNFSNYSSWHY 183 (567)
T ss_dssp HHTTTTTTCCCHHHHHH
T ss_pred HHHHHHHCCCCccHHHH
Confidence 99999999999987754
No 171
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.05 E-value=3.2e-09 Score=83.17 Aligned_cols=84 Identities=12% Similarity=0.071 Sum_probs=60.4
Q ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCC
Q 046296 68 NHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEV----RGDFAKAEELCGRAILANPGDGNILSLYADLIWQ---AHKD 140 (167)
Q Consensus 68 ~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~----~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~---~~g~ 140 (167)
.+++++|+.+|+++++++ ++.++++++.++. . .+++++|+.+|++|++. +++.++.++|.++.. ..++
T Consensus 55 ~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~-~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~ 129 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN--YSNGCHLLGNLYY-SGQGVSQNTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRD 129 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCC
T ss_pred CCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHh-CCCCcccCHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccC
Confidence 567777777777777764 6777777777765 6 77777777777777776 367777777777653 1567
Q ss_pred HHHHHHHHHHHHHhCC
Q 046296 141 ASRAESYFDQAVKSAP 156 (167)
Q Consensus 141 ~~eA~~~~e~Al~l~P 156 (167)
+++|+.+|++|+++.+
T Consensus 130 ~~~A~~~~~~a~~~~~ 145 (273)
T 1ouv_A 130 FKKAVEYFTKACDLND 145 (273)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCc
Confidence 7777777777777653
No 172
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.05 E-value=5.1e-10 Score=92.34 Aligned_cols=93 Identities=14% Similarity=0.011 Sum_probs=83.3
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPG------NALLLGNYARFLKEVRGDFAKAEELCGRAIL-----ANPGDGNILSLYA 131 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~------n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~-----l~P~~~~al~~lA 131 (167)
.+|...+++++|+.+|++|+++.+. .+.++.++|.++. ..+++++|+.+|++|++ .+|..+.++.++|
T Consensus 190 ~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la 268 (378)
T 3q15_A 190 GNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYD-RSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLS 268 (378)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHH
Confidence 4678889999999999999997442 2467889999887 79999999999999999 8898899999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCC
Q 046296 132 DLIWQAHKDASRAESYFDQAVKSAPD 157 (167)
Q Consensus 132 ~~l~~~~g~~~eA~~~~e~Al~l~P~ 157 (167)
.+++. ++++++|+.+|++|+++.+.
T Consensus 269 ~~~~~-~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 269 WTLCK-AGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 99999 99999999999999998654
No 173
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.05 E-value=2.1e-09 Score=89.06 Aligned_cols=92 Identities=10% Similarity=0.064 Sum_probs=84.7
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHH----HHHc---CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYARFL----KEVR---GDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS 142 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l----~~~~---gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~ 142 (167)
.+++++.++.++|+++|++..+|+....++ . .. .+++++++++.++++++|++..+|.+...++.. .++++
T Consensus 84 ~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~-~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~-l~~~~ 161 (306)
T 3dra_A 84 NLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIME-LNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDT-FDLHN 161 (306)
T ss_dssp CHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHH-HTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCTT
T ss_pred cHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHH-hccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hcccC
Confidence 899999999999999999999999998888 4 34 789999999999999999999999999999988 99988
Q ss_pred --HHHHHHHHHHHhCCCCHHHHH
Q 046296 143 --RAESYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 143 --eA~~~~e~Al~l~P~~~~~l~ 163 (167)
+++++++++|+++|.|..++.
T Consensus 162 ~~~EL~~~~~~i~~d~~N~sAW~ 184 (306)
T 3dra_A 162 DAKELSFVDKVIDTDLKNNSAWS 184 (306)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999999999999987774
No 174
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.04 E-value=2.2e-10 Score=92.91 Aligned_cols=93 Identities=13% Similarity=0.023 Sum_probs=68.2
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNAL------LLGNYARFLKEVRGDFAKAEELCGRAILANPGD------GNILSLY 130 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~------~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~------~~al~~l 130 (167)
.+|...+++++|+.+|++++++.|.... ++.+++.++. ..+++++|+.+|++++++.|.. +.++..+
T Consensus 195 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l 273 (406)
T 3sf4_A 195 NTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSL 273 (406)
T ss_dssp HHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHH
Confidence 3566667788888888888877665433 6777777775 6788888888888888776655 6677777
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 046296 131 ADLIWQAHKDASRAESYFDQAVKSAPD 157 (167)
Q Consensus 131 A~~l~~~~g~~~eA~~~~e~Al~l~P~ 157 (167)
|.++.. ++++++|+.+|++++++.|.
T Consensus 274 a~~~~~-~g~~~~A~~~~~~a~~~~~~ 299 (406)
T 3sf4_A 274 GNTYTL-LQDYEKAIDYHLKHLAIAQE 299 (406)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-hCcHHHHHHHHHHHHHHHHh
Confidence 777777 78888888888888777543
No 175
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.04 E-value=2.7e-09 Score=90.19 Aligned_cols=94 Identities=12% Similarity=0.108 Sum_probs=86.8
Q ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-C-CHHHH
Q 046296 68 NHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRG-DFAKAEELCGRAILANPGDGNILSLYADLIWQAH-K-DASRA 144 (167)
Q Consensus 68 ~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~g-d~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~-g-~~~eA 144 (167)
....++|+.++.++|+++|++..+|+....++. ..+ ++++++++++++|..+|++..+|.....++.. . + +++++
T Consensus 67 ~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~-~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~-l~~~~~~~E 144 (349)
T 3q7a_A 67 EEKSERALELTEIIVRMNPAHYTVWQYRFSLLT-SLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDR-ISPQDPVSE 144 (349)
T ss_dssp TCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH-HCCSCCHHH
T ss_pred CCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-hcCCChHHH
Confidence 355678999999999999999999999999987 677 69999999999999999999999999999998 6 7 89999
Q ss_pred HHHHHHHHHhCCCCHHHHH
Q 046296 145 ESYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 145 ~~~~e~Al~l~P~~~~~l~ 163 (167)
+++++++|+++|.|..++.
T Consensus 145 L~~~~k~L~~dpkNy~AW~ 163 (349)
T 3q7a_A 145 IEYIHGSLLPDPKNYHTWA 163 (349)
T ss_dssp HHHHHHHTSSCTTCHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHH
Confidence 9999999999999988764
No 176
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.03 E-value=3.1e-09 Score=89.19 Aligned_cols=92 Identities=12% Similarity=-0.027 Sum_probs=65.3
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc----------
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGD-FAKAEELCGRAILANPGDGNILSLYADLIWQAH---------- 138 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd-~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~---------- 138 (167)
.+++++.++.++|+++|.|..+|+....++. ..+. ++++++++.++|+.+|.|..+|++.+.++.. .
T Consensus 125 ~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~-~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~-l~~~~~~~~~~ 202 (331)
T 3dss_A 125 NWARELELCARFLEADERNFHCWDYRRFVAA-QAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQ-LHPQPDSGPQG 202 (331)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-HSCCC------
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-hhhcccccccc
Confidence 3677777777777777777777777776665 5565 5777777777777777777777777777666 4
Q ss_pred ----CCHHHHHHHHHHHHHhCCCCHHHHH
Q 046296 139 ----KDASRAESYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 139 ----g~~~eA~~~~e~Al~l~P~~~~~l~ 163 (167)
+.++++++++++||.++|+|..++.
T Consensus 203 ~~~~~~~~eEle~~~~ai~~~P~d~SaW~ 231 (331)
T 3dss_A 203 RLPENVLLKELELVQNAFFTDPNDQSAWF 231 (331)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 3466777777777777777776663
No 177
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.02 E-value=8.6e-10 Score=75.33 Aligned_cols=59 Identities=12% Similarity=0.081 Sum_probs=55.3
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPG 122 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~ 122 (167)
.+|...+++++|+.+|+++++++|+++.+|+++|.++. ..+++++|+.+|++++++.|.
T Consensus 15 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 15 QEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYE-RLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhc
Confidence 57888999999999999999999999999999999987 899999999999999998764
No 178
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.02 E-value=1.4e-09 Score=95.44 Aligned_cols=96 Identities=11% Similarity=0.082 Sum_probs=81.4
Q ss_pred hhcCCChHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHH
Q 046296 65 SNNNHGSSSTDAYNEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILA-----NPGD---GNILS 128 (167)
Q Consensus 65 y~~~g~~d~A~~~~~kAL~l-----~P~n~---~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l-----~P~~---~~al~ 128 (167)
+.+++++++|+..|+++|++ .|++| .++.++|.++. .+|++++|+.+++++|++ -|++ +.++.
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~-~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~ 397 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLS-YLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVM 397 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 45779999999999999987 45665 56788998886 899999999999999987 3454 56678
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHH
Q 046296 129 LYADLIWQAHKDASRAESYFDQAVKS-----APDDWLNL 162 (167)
Q Consensus 129 ~lA~~l~~~~g~~~eA~~~~e~Al~l-----~P~~~~~l 162 (167)
++|.+|.. +|++++|+.+|++|+++ .|++|.+.
T Consensus 398 nLa~~~~~-~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 435 (490)
T 3n71_A 398 RAGLTNWH-AGHIEVGHGMICKAYAILLVTHGPSHPITK 435 (490)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCTTSHHHH
T ss_pred HHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCCChHHH
Confidence 99999999 99999999999999985 78887654
No 179
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.01 E-value=1.5e-09 Score=93.96 Aligned_cols=93 Identities=12% Similarity=0.008 Sum_probs=79.2
Q ss_pred CCChHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHH
Q 046296 68 NHGSSSTDAYNEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILA--------NPGDGNILSLYA 131 (167)
Q Consensus 68 ~g~~d~A~~~~~kAL~l-----~P~n~---~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l--------~P~~~~al~~lA 131 (167)
.+++++|+..|+++|++ .|++| ..+.++|.++. .+|++++|+.+++++|++ +|+-+..++++|
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~-~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCL-YMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 46899999999999985 57776 45778998886 899999999999999977 344456778999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHH
Q 046296 132 DLIWQAHKDASRAESYFDQAVKS-----APDDWLNL 162 (167)
Q Consensus 132 ~~l~~~~g~~~eA~~~~e~Al~l-----~P~~~~~l 162 (167)
.+|+. +|++++|+.+|++|+++ .|++|.+.
T Consensus 390 ~~~~~-qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 424 (433)
T 3qww_A 390 RLYMG-LENKAAGEKALKKAIAIMEVAHGKDHPYIS 424 (433)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHHHHHHTCTTCHHHH
T ss_pred HHHHh-ccCHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 99999 99999999999999986 78888665
No 180
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.01 E-value=9.1e-09 Score=74.64 Aligned_cols=88 Identities=17% Similarity=0.117 Sum_probs=75.9
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH--
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEV----RGDFAKAEELCGRAILANPGDGNILSLYADLIWQ-- 136 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~----~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~-- 136 (167)
.+|......++|+.+|+++.+. .++.++++++.++. . ..++++|+.+|++|.+. .++.++++++.++..
T Consensus 33 ~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~ 107 (138)
T 1klx_A 33 LVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYE-NGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGK 107 (138)
T ss_dssp HHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTS
T ss_pred HHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHH-cCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCC
Confidence 3455556788899999999987 78999999999876 5 78999999999999986 789999999999875
Q ss_pred -HcCCHHHHHHHHHHHHHhC
Q 046296 137 -AHKDASRAESYFDQAVKSA 155 (167)
Q Consensus 137 -~~g~~~eA~~~~e~Al~l~ 155 (167)
+.+++++|+.+|++|.+..
T Consensus 108 g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 108 GVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp SSCCCHHHHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHCC
Confidence 2579999999999999984
No 181
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.01 E-value=5.2e-09 Score=89.16 Aligned_cols=92 Identities=10% Similarity=-0.008 Sum_probs=77.2
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHH-------------------------------------------HHHcCC
Q 046296 69 HGSSSTDAYNEKMIEANPGNALLLGNYARFL-------------------------------------------KEVRGD 105 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l-------------------------------------------~~~~gd 105 (167)
.++.+|+.+|++||+++|+++.++..++.++ ....++
T Consensus 213 ~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~~gd 292 (372)
T 3ly7_A 213 KSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGK 292 (372)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHhCCC
Confidence 4578999999999999999988877433322 113689
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 106 FAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 106 ~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l 162 (167)
+++|+.++++|++++|+ ..++..+|.++.. .|++++|++.|++|+.++|..+.+.
T Consensus 293 ~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~-~G~~~eA~e~~~~AlrL~P~~~t~~ 347 (372)
T 3ly7_A 293 TDESYQAINTGIDLEMS-WLNYVLLGKVYEM-KGMNREAADAYLTAFNLRPGANTLY 347 (372)
T ss_dssp HHHHHHHHHHHHHHCCC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSCSHHHHH
T ss_pred HHHHHHHHHHHHhcCCC-HHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCCCcChHH
Confidence 99999999999999974 7788899999998 9999999999999999999887443
No 182
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.00 E-value=6.2e-10 Score=86.98 Aligned_cols=89 Identities=11% Similarity=0.008 Sum_probs=41.3
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPG------NALLLGNYARFLKEVRGDFAKAEELCGRAILANPGD------GNILSLYA 131 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~------n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~------~~al~~lA 131 (167)
+|...+++++|+.+|++++++.|. ...++.+++.++. ..+++++|+.++++++++.|.. +.++..+|
T Consensus 192 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la 270 (338)
T 3ro2_A 192 THYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLG 270 (338)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Confidence 344444455555555554444221 2444444444443 4445555555555554444333 34444444
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHh
Q 046296 132 DLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 132 ~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
.++.. ++++++|+.+|++++++
T Consensus 271 ~~~~~-~g~~~~A~~~~~~a~~~ 292 (338)
T 3ro2_A 271 NTYTL-LQDYEKAIDYHLKHLAI 292 (338)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHH-hcCHHHHHHHHHHHHHH
Confidence 44444 45555555555554444
No 183
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.00 E-value=8.5e-09 Score=86.54 Aligned_cols=92 Identities=13% Similarity=0.111 Sum_probs=85.6
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC-HHHHHHH
Q 046296 71 SSSTDAYNEKMIEANPGNALLLGNYARFLKEVRG--DFAKAEELCGRAILANPGDGNILSLYADLIWQAHKD-ASRAESY 147 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~g--d~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~-~~eA~~~ 147 (167)
+++++.++.++|+.+|+++.+|+....++. ..+ ++++++.++.++++++|.|..+|.+.+.++.. .+. +++++++
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~-~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~-l~~~~~eel~~ 167 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLS-RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQ-AAVAPAEELAF 167 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHh-ccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCcCHHHHHHH
Confidence 789999999999999999999999999886 677 48999999999999999999999999999998 888 6999999
Q ss_pred HHHHHHhCCCCHHHHHh
Q 046296 148 FDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 148 ~e~Al~l~P~~~~~l~~ 164 (167)
++++|+++|.|..++.+
T Consensus 168 ~~~~I~~~p~N~SAW~~ 184 (331)
T 3dss_A 168 TDSLITRNFSNYSSWHY 184 (331)
T ss_dssp HHHHHHHCSCCHHHHHH
T ss_pred HHHHHHHCCCCHHHHHH
Confidence 99999999999988754
No 184
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=99.00 E-value=5.3e-09 Score=72.56 Aligned_cols=74 Identities=12% Similarity=0.055 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 046296 89 ALLLGNYARFLKEVRGDFAKAEELCGRAILAN-------PGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLN 161 (167)
Q Consensus 89 ~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~-------P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~ 161 (167)
+.-.+.+|.+++ ..++|..|+.+|++|++.. +..+.++..++.++++ +|++++|+.++++|++++|+++.+
T Consensus 5 a~dc~~lG~~~~-~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 5 AEDCFELGKVAY-TEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ-QGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHH-HccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHhcCCCCHHH
Confidence 444556666665 5677777777777776652 2446666677777776 777777777777777777777666
Q ss_pred HHh
Q 046296 162 LIK 164 (167)
Q Consensus 162 l~~ 164 (167)
+.|
T Consensus 83 ~~n 85 (104)
T 2v5f_A 83 NGN 85 (104)
T ss_dssp HHH
T ss_pred Hhh
Confidence 544
No 185
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.00 E-value=1.3e-09 Score=82.75 Aligned_cols=60 Identities=12% Similarity=0.058 Sum_probs=52.9
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYARFLKEVR-----------GDFAKAEELCGRAILANPGDGNILSLY 130 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~-----------gd~e~A~~~~~rAl~l~P~~~~al~~l 130 (167)
.+++|+..|++||+++|+++.+|++++.++. .. +++++|+++|++||+++|++..++..+
T Consensus 61 ~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~-~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al 131 (158)
T 1zu2_A 61 MIQEAITKFEEALLIDPKKDEAVWCIGNAYT-SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSL 131 (158)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH-HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3679999999999999999999999999987 44 489999999999999999997554443
No 186
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.97 E-value=1.9e-09 Score=88.81 Aligned_cols=99 Identities=10% Similarity=-0.143 Sum_probs=82.4
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHHc
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGN--ALLLGNYARFLKEVRGDFAKAEELCGRAILAN--PG-DGNILSLYADLIWQAH 138 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n--~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~--P~-~~~al~~lA~~l~~~~ 138 (167)
+|++.+++++|+.+|+++++..+.. ..++++++.++. ..+++++|+.+|++++... |. .+.+++++|.++.. +
T Consensus 144 l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~-~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~-l 221 (282)
T 4f3v_A 144 VYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAA-NLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRS-Q 221 (282)
T ss_dssp HHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHH-H
T ss_pred HHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHH-HCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHH-c
Confidence 6677788888888888776653221 358899999886 8999999999999999654 65 66799999999999 9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 139 KDASRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 139 g~~~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
|+.++|+..|++++..+|+ +.+...+
T Consensus 222 Gr~deA~~~l~~a~a~~P~-~~~~~aL 247 (282)
T 4f3v_A 222 GNESAAVALLEWLQTTHPE-PKVAAAL 247 (282)
T ss_dssp TCHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCc-HHHHHHH
Confidence 9999999999999999999 7665443
No 187
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.97 E-value=4.2e-10 Score=92.32 Aligned_cols=93 Identities=11% Similarity=-0.022 Sum_probs=74.9
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNAL------LLGNYARFLKEVRGDFAKAEELCGRAILANPGD------GNILSLY 130 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~------~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~------~~al~~l 130 (167)
.+|...+++++|+.+|++++++.|.... ++.+++.++. ..+++++|+.+|++++++.|.. +.++..+
T Consensus 231 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l 309 (411)
T 4a1s_A 231 NTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHI-FLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSL 309 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH-HCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4677788888899999888888775433 7778888776 7888889999888888887754 6778888
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 046296 131 ADLIWQAHKDASRAESYFDQAVKSAPD 157 (167)
Q Consensus 131 A~~l~~~~g~~~eA~~~~e~Al~l~P~ 157 (167)
|.++.. ++++++|+.+|++++++.|.
T Consensus 310 a~~~~~-~g~~~~A~~~~~~al~~~~~ 335 (411)
T 4a1s_A 310 GNTYTL-LHEFNTAIEYHNRHLAIAQE 335 (411)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 888888 88888888888888887553
No 188
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.93 E-value=1.3e-09 Score=89.90 Aligned_cols=98 Identities=13% Similarity=-0.146 Sum_probs=82.4
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGN-------ALLLGNYARFLKEVRGDFAKAEELCGRAILANP------GDGNILSL 129 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n-------~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P------~~~~al~~ 129 (167)
.+|...+++++|+.+|++|+++.+.. +.+++++|.++. ..+++++|+++|++|+++.+ ..+.++.+
T Consensus 149 ~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 227 (378)
T 3q15_A 149 EAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYD-DFKHYDKALPHLEAALELAMDIQNDRFIAISLLN 227 (378)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 46788899999999999999986542 457788999886 89999999999999999743 23467889
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCHHHH
Q 046296 130 YADLIWQAHKDASRAESYFDQAVK-----SAPDDWLNL 162 (167)
Q Consensus 130 lA~~l~~~~g~~~eA~~~~e~Al~-----l~P~~~~~l 162 (167)
+|.++.. ++++++|+.+|++|++ .+|..+.++
T Consensus 228 lg~~y~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 264 (378)
T 3q15_A 228 IANSYDR-SGDDQMAVEHFQKAAKVSREKVPDLLPKVL 264 (378)
T ss_dssp HHHHHHH-HTCHHHHHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred HHHHHHH-CCCHHHHHHHHHHHHHHHHhhCChhHHHHH
Confidence 9999999 9999999999999999 666655444
No 189
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.93 E-value=3.9e-09 Score=72.74 Aligned_cols=71 Identities=11% Similarity=0.110 Sum_probs=60.8
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPG--DGNILSLYADLI 134 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~--~~~al~~lA~~l 134 (167)
.+|...+++++|+.+|+++++++|+++.++++++.++. ..+++++|+.+|+++++++|. +..++..+..++
T Consensus 27 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l 99 (115)
T 2kat_A 27 KTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQ-GQGDRAGARQAWESGLAAAQSRGDQQVVKELQVFL 99 (115)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhccccccHHHHHHHHHHH
Confidence 46788899999999999999999999999999999987 899999999999999999884 444444444433
No 190
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.92 E-value=7.6e-09 Score=76.53 Aligned_cols=91 Identities=10% Similarity=0.026 Sum_probs=75.3
Q ss_pred hcCCChHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------hCCCCHHHHHHHHHHHHHHc
Q 046296 66 NNNHGSSSTDAYNEKMIEANP-GNALLLGNYARFLKEVRGDFAKAEELCGRAIL------ANPGDGNILSLYADLIWQAH 138 (167)
Q Consensus 66 ~~~g~~d~A~~~~~kAL~l~P-~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~------l~P~~~~al~~lA~~l~~~~ 138 (167)
+..+++++|+..++.... +| ..+.++..++.++. ..+++++|+.+|+++++ ..|..+.++.++|.++.. +
T Consensus 3 ~~~g~~~~A~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~ 79 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLA-HPATASGARFMLGYVYA-FMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERM-A 79 (203)
T ss_dssp ----CHHHHHHHHHHHHT-STTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-T
T ss_pred cccccHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH-c
Confidence 456899999996665544 55 67899999999887 89999999999999999 456677889999999999 9
Q ss_pred CCHHHHHHHHHHHHHh---CCCCH
Q 046296 139 KDASRAESYFDQAVKS---APDDW 159 (167)
Q Consensus 139 g~~~eA~~~~e~Al~l---~P~~~ 159 (167)
+++++|+.+|++++++ .|+++
T Consensus 80 g~~~~A~~~~~~al~~~~~~~~~~ 103 (203)
T 3gw4_A 80 GNWDAARRCFLEERELLASLPEDP 103 (203)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred CCHHHHHHHHHHHHHHHHHcCccH
Confidence 9999999999999998 56454
No 191
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.91 E-value=4.4e-09 Score=90.64 Aligned_cols=97 Identities=12% Similarity=-0.059 Sum_probs=80.9
Q ss_pred hhcCCChHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHH
Q 046296 65 SNNNHGSSSTDAYNEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILA-----NPGD---GNILS 128 (167)
Q Consensus 65 y~~~g~~d~A~~~~~kAL~l-----~P~n~---~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l-----~P~~---~~al~ 128 (167)
+.+++++++|+..|+++|++ .|+++ .++.+++.++. .++++++|+.+++++|++ -|++ +..++
T Consensus 297 ~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~-~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~ 375 (429)
T 3qwp_A 297 LKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACI-NLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVM 375 (429)
T ss_dssp HHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHH
T ss_pred HHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHH
Confidence 34568999999999999975 56675 56778888886 799999999999999976 3455 46677
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHH
Q 046296 129 LYADLIWQAHKDASRAESYFDQAVKS-----APDDWLNLI 163 (167)
Q Consensus 129 ~lA~~l~~~~g~~~eA~~~~e~Al~l-----~P~~~~~l~ 163 (167)
++|.+++. +|++++|+.+|++|+++ .|++|.+..
T Consensus 376 nLa~~~~~-~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 414 (429)
T 3qwp_A 376 KVGKLQLH-QGMFPQAMKNLRLAFDIMRVTHGREHSLIED 414 (429)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCTTSHHHHH
T ss_pred HHHHHHHh-cCCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Confidence 89999999 99999999999999985 788886653
No 192
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.87 E-value=9.6e-09 Score=86.84 Aligned_cols=93 Identities=8% Similarity=-0.039 Sum_probs=85.9
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH-----
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYARFLKEVR-G-DFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDAS----- 142 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~-g-d~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~----- 142 (167)
.+++++.++.++|+.+|++..+|+....++. .. + +++++++++.++|+++|+|..+|.....++.. .+.++
T Consensus 104 ~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~-~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~-l~~~~~~~~~ 181 (349)
T 3q7a_A 104 SLEDELRLMNEFAVQNLKSYQVWHHRLLLLD-RISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSH-FSTLGRISEA 181 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH-HHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHH-HHHTTCCCHH
T ss_pred hHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hccccccchh
Confidence 5999999999999999999999999999887 45 6 89999999999999999999999999999988 77777
Q ss_pred ---HHHHHHHHHHHhCCCCHHHHHh
Q 046296 143 ---RAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 143 ---eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
+++++++++|+++|.|..++.+
T Consensus 182 ~~~eELe~~~k~I~~dp~N~SAW~~ 206 (349)
T 3q7a_A 182 QWGSELDWCNEMLRVDGRNNSAWGW 206 (349)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 9999999999999999887743
No 193
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.82 E-value=1.9e-08 Score=81.91 Aligned_cols=92 Identities=14% Similarity=0.043 Sum_probs=79.9
Q ss_pred chhhcCCChHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----CHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEAN--------PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPG-----DGNILSL 129 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~--------P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~-----~~~al~~ 129 (167)
.+|...+++++|+.+|++++++. |....++.+++.++. ..+++++|+.++++++++.|. ...++..
T Consensus 101 ~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 179 (373)
T 1hz4_A 101 EILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLW-AWARLDEAEASARSGIEVLSSYQPQQQLQCLAM 179 (373)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHH
Confidence 46778899999999999999986 344667888998887 799999999999999999875 3567888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 046296 130 YADLIWQAHKDASRAESYFDQAVKSAP 156 (167)
Q Consensus 130 lA~~l~~~~g~~~eA~~~~e~Al~l~P 156 (167)
++.++.. .|++++|+.++++++++.+
T Consensus 180 la~~~~~-~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 180 LIQCSLA-RGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp HHHHHHH-HTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHH-cCCHHHHHHHHHHHHHHHh
Confidence 9999999 9999999999999998743
No 194
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.82 E-value=6.9e-09 Score=84.60 Aligned_cols=92 Identities=14% Similarity=0.104 Sum_probs=66.6
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNA------LLLGNYARFLKEVRGDFAKAEELCGRAILAN--------PGDGNILSL 129 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~------~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~--------P~~~~al~~ 129 (167)
+|...+++++|+.+|++++++.|... .++.+++.++. ..|++++|+.+|++++++. |....++.+
T Consensus 62 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 140 (373)
T 1hz4_A 62 VLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILF-AQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRI 140 (373)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHH
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHH
Confidence 45566788888888888887765432 23566777665 6788888888888888764 334556677
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 046296 130 YADLIWQAHKDASRAESYFDQAVKSAPD 157 (167)
Q Consensus 130 lA~~l~~~~g~~~eA~~~~e~Al~l~P~ 157 (167)
++.+++. +|++++|+.++++++++.|.
T Consensus 141 la~~~~~-~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 141 RAQLLWA-WARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHH-hcCHHHHHHHHHHHHHHhhc
Confidence 8888887 88888888888888887764
No 195
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.82 E-value=2.6e-08 Score=69.01 Aligned_cols=68 Identities=13% Similarity=0.108 Sum_probs=61.7
Q ss_pred chhhcCCChHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEAN-------PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYA 131 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~-------P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA 131 (167)
..++.++++..|+.+|++|++.. +..+.++.+|+.+++ ..+++++|+.++++|++++|+++.++.++.
T Consensus 13 ~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 13 KVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 56788899999999999999974 356889999999997 899999999999999999999999988887
No 196
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.82 E-value=2.8e-08 Score=84.84 Aligned_cols=90 Identities=16% Similarity=0.095 Sum_probs=71.4
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCCHH
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYARFLKEV----RGDFAKAEELCGRAILANPGDGNILSLYADLIWQ---AHKDAS 142 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~----~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~---~~g~~~ 142 (167)
++++|+.+|+++++. .++.++++++.++. . .+++++|+.+|++|++. .++.++.++|.++.. +.++++
T Consensus 346 ~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~-~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~~ 420 (490)
T 2xm6_A 346 EHKKAVEWFRKAAAK--GEKAAQFNLGNALL-QGKGVKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDYV 420 (490)
T ss_dssp HHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHH
T ss_pred cHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCHH
Confidence 678888888888876 67888888888775 5 68889999999998875 468888888888875 257899
Q ss_pred HHHHHHHHHHHhCCC---CHHHHHh
Q 046296 143 RAESYFDQAVKSAPD---DWLNLIK 164 (167)
Q Consensus 143 eA~~~~e~Al~l~P~---~~~~l~~ 164 (167)
+|+.+|++|++.+|+ ++.++.+
T Consensus 421 ~A~~~~~~A~~~~~~~~~~~~a~~~ 445 (490)
T 2xm6_A 421 QAWAWFDTASTNDMNLFGTENRNIT 445 (490)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCcCCHHHHHH
Confidence 999999999998854 5555543
No 197
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.76 E-value=2.6e-08 Score=85.21 Aligned_cols=93 Identities=16% Similarity=0.102 Sum_probs=66.7
Q ss_pred hhhcCC---ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-
Q 046296 64 YSNNNH---GSSSTDAYNEKMIEANPGNALLLGNYARFLKEVR----GDFAKAEELCGRAILANPGDGNILSLYADLIW- 135 (167)
Q Consensus 64 ~y~~~g---~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~----gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~- 135 (167)
+|...+ ++++|+.+|+++++..|.++..+++++.++. .. .++++|+.+|++|+ |.++.+++++|.+++
T Consensus 185 ~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~-~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~ 260 (452)
T 3e4b_A 185 VYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLG-DATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYD 260 (452)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHT-CGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHH
T ss_pred HHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh-CCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHh
Confidence 444556 7788888888888888888887777887664 23 57888888888876 788888888887743
Q ss_pred -HHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 136 -QAHKDASRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 136 -~~~g~~~eA~~~~e~Al~l~P~~~~~l 162 (167)
...+++++|+.+|++|++.. ++.++
T Consensus 261 ~~~~~d~~~A~~~~~~Aa~~g--~~~A~ 286 (452)
T 3e4b_A 261 FPELGDVEQMMKYLDNGRAAD--QPRAE 286 (452)
T ss_dssp SGGGCCHHHHHHHHHHHHHTT--CHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHCC--CHHHH
Confidence 22678888888888877653 44443
No 198
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.76 E-value=6.7e-08 Score=70.71 Aligned_cols=93 Identities=12% Similarity=-0.023 Sum_probs=81.5
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHH
Q 046296 69 HGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDF---AKAEELCGRAILAN-P-GDGNILSLYADLIWQAHKDASR 143 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~---e~A~~~~~rAl~l~-P-~~~~al~~lA~~l~~~~g~~~e 143 (167)
.....+...|.++++.++.++.+.++||+.|. ...+. .+++.+++..++.+ | ..-+.++.+|..+++ .++|++
T Consensus 15 ~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv-~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yk-lg~Y~~ 92 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLV-RTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEK 92 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHT-TSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHH-TTCHHH
T ss_pred HHHHHHHHHHHHHhccCCCcHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH-hhhHHH
Confidence 45678889999999999999999999999886 55544 55999999999987 6 677899999999999 999999
Q ss_pred HHHHHHHHHHhCCCCHHHHH
Q 046296 144 AESYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 144 A~~~~e~Al~l~P~~~~~l~ 163 (167)
|+.+++.+|+++|+|..+..
T Consensus 93 A~~~~~~lL~~eP~n~QA~~ 112 (126)
T 1nzn_A 93 ALKYVRGLLQTEPQNNQAKE 112 (126)
T ss_dssp HHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHH
Confidence 99999999999999987653
No 199
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.72 E-value=4.7e-08 Score=83.65 Aligned_cols=86 Identities=22% Similarity=0.215 Sum_probs=57.3
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-----CH
Q 046296 69 HGSSSTDAYNEKMIEANPGNALLLGNYARFLK--EVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHK-----DA 141 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~--~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g-----~~ 141 (167)
.++++|+.+|++++ |.++.++++++.+++ ...+++++|+.+|++|++. .++.+++++|.++.. | ++
T Consensus 231 ~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~~--G~g~~~d~ 303 (452)
T 3e4b_A 231 PDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYYE--GKWVPADA 303 (452)
T ss_dssp CCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH--CSSSCCCH
T ss_pred CCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHc--CCCCCCCH
Confidence 46777777777776 777777777776633 2466777777777777643 467777777776654 4 77
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHh
Q 046296 142 SRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 142 ~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
++|+.+|++|+ |.++.++.+
T Consensus 304 ~~A~~~~~~Aa---~g~~~A~~~ 323 (452)
T 3e4b_A 304 KAAEAHFEKAV---GREVAADYY 323 (452)
T ss_dssp HHHHHHHHTTT---TTCHHHHHH
T ss_pred HHHHHHHHHHh---CCCHHHHHH
Confidence 77777777776 666655433
No 200
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.65 E-value=2.3e-07 Score=67.15 Aligned_cols=85 Identities=18% Similarity=0.105 Sum_probs=71.3
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCCHHHHH
Q 046296 69 HGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQ---AHKDASRAE 145 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~---~~g~~~eA~ 145 (167)
.++++|+.+|+++.+..+..+. ++.++. ....+++|+++|++|.+. .++.+++++|.++.. +.+++++|+
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~a~----lg~~y~-~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMFGC----LSLVSN-SQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHH----HHHHTC-TTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCHhhh----HHHHHH-cCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 5799999999999998755544 787775 677899999999999987 899999999999875 257999999
Q ss_pred HHHHHHHHhCCCCHHHH
Q 046296 146 SYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 146 ~~~e~Al~l~P~~~~~l 162 (167)
.+|++|.+. .++.+.
T Consensus 82 ~~~~~Aa~~--g~~~a~ 96 (138)
T 1klx_A 82 QYYSKACGL--NDQDGC 96 (138)
T ss_dssp HHHHHHHHT--TCHHHH
T ss_pred HHHHHHHcC--CCHHHH
Confidence 999999987 445444
No 201
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.64 E-value=3.3e-07 Score=78.14 Aligned_cols=80 Identities=14% Similarity=0.129 Sum_probs=36.8
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC---C
Q 046296 69 HGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVR-----GDFAKAEELCGRAILANPGDGNILSLYADLIWQAHK---D 140 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~-----gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g---~ 140 (167)
+++++|+.+|+++++. .++.++++++.++. .. +++++|+.+|++|++. .++.++++++.++.. .+ +
T Consensus 273 ~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~-~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~-~g~~~~ 346 (490)
T 2xm6_A 273 KEPLKALEWYRKSAEQ--GNSDGQYYLAHLYD-KGAEGVAKNREQAISWYTKSAEQ--GDATAQANLGAIYFR-LGSEEE 346 (490)
T ss_dssp CCHHHHHHHHHHHHTT--TCHHHHHHHHHHHH-HCBTTBCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH-SCCHHH
T ss_pred CCHHHHHHHHHHHHHc--CCHHHHHHHHHHHH-cCCCCCcCCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHh-CCCccc
Confidence 3455555555554432 34444445554443 23 4455555555554443 334444444444444 33 4
Q ss_pred HHHHHHHHHHHHHh
Q 046296 141 ASRAESYFDQAVKS 154 (167)
Q Consensus 141 ~~eA~~~~e~Al~l 154 (167)
+++|+++|++|++.
T Consensus 347 ~~~A~~~~~~a~~~ 360 (490)
T 2xm6_A 347 HKKAVEWFRKAAAK 360 (490)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC
Confidence 44444444444443
No 202
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.63 E-value=1.4e-07 Score=64.80 Aligned_cols=54 Identities=15% Similarity=0.039 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 046296 71 SSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGN 125 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~ 125 (167)
.++|..+|+++|+++|+++.+++.+|..++ ..++|++|+.+++++++.+|.++.
T Consensus 25 ~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~-~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 25 TDEVSLLLEQALQLEPYNEAALSLIANDHF-ISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CHHHHHHHHHHHHHCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCCCcc
Confidence 799999999999999999999999999987 799999999999999999998543
No 203
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.59 E-value=2.8e-08 Score=81.75 Aligned_cols=90 Identities=10% Similarity=-0.137 Sum_probs=78.2
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-C-HHHHHHHHHHHHHHcCC
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPG-D-GNILSLYADLIWQAHKD 140 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~-~-~~al~~lA~~l~~~~g~ 140 (167)
.++...+++++|.+.|+.++...|.++ +++.++.++. ..+++++|+.+|++++...+. . ..+++++|.++.. +|+
T Consensus 110 ~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~-~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~-LG~ 186 (282)
T 4f3v_A 110 ACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYG-AAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAAN-LAL 186 (282)
T ss_dssp HHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHH-HTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHH-TTC
T ss_pred HHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHH-HcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHH-CCC
Confidence 346777999999999999999999999 9999998876 899999999999988775322 1 4589999999999 999
Q ss_pred HHHHHHHHHHHHHhC
Q 046296 141 ASRAESYFDQAVKSA 155 (167)
Q Consensus 141 ~~eA~~~~e~Al~l~ 155 (167)
+++|+.+|++++...
T Consensus 187 ~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 187 FTEAERRLTEANDSP 201 (282)
T ss_dssp HHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999999654
No 204
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.58 E-value=7.7e-08 Score=84.37 Aligned_cols=91 Identities=10% Similarity=0.084 Sum_probs=76.4
Q ss_pred chhhcCCChHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH---
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILA-----NPGDGNI--- 126 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l-----~P~n~---~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l-----~P~~~~a--- 126 (167)
.+|..++++++|+.+|+++|++ -|++| ..++++|.++. .+|++++|+.+|++|+++ -|++|.+
T Consensus 359 ~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~-~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~ 437 (490)
T 3n71_A 359 EVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNW-HAGHIEVGHGMICKAYAILLVTHGPSHPITKDL 437 (490)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHH
Confidence 4788899999999999999987 46665 56789999887 899999999999999976 4676654
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 046296 127 LSLYADLIWQAHKDASRAESYFDQAVKSA 155 (167)
Q Consensus 127 l~~lA~~l~~~~g~~~eA~~~~e~Al~l~ 155 (167)
+.+++.++.+ ++.+++|+..|++|.+..
T Consensus 438 ~~~l~~~~~e-~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 438 EAMRMQTEME-LRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4577778888 999999999999987743
No 205
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.43 E-value=5.5e-07 Score=74.94 Aligned_cols=98 Identities=10% Similarity=-0.036 Sum_probs=53.2
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCC----CHHHHHHH--HHHHHHHcC--CHHHHHHHHHHHHHhCCC--CHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPG----NALLLGNY--ARFLKEVRG--DFAKAEELCGRAILANPG--DGNILSLYAD 132 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~----n~~~l~~l--A~~l~~~~g--d~e~A~~~~~rAl~l~P~--~~~al~~lA~ 132 (167)
++|.++++.+.|.+.++++.+.+|+ +-..+..+ +++.. ..+ ++.+|...|+++....|+ .+..+++
T Consensus 144 qi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l-~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln--- 219 (310)
T 3mv2_B 144 EVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKF-ATNKETATSNFYYYEELSQTFPTWKTQLGLLN--- 219 (310)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH-HHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---
T ss_pred HHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHH-HhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---
Confidence 4556666666666666666666662 11122222 22222 233 566666666666655554 2333333
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh----------CCCCHHHHHhc
Q 046296 133 LIWQAHKDASRAESYFDQAVKS----------APDDWLNLIKL 165 (167)
Q Consensus 133 ~l~~~~g~~~eA~~~~e~Al~l----------~P~~~~~l~~y 165 (167)
++.. ++++++|++.+++++++ +|+++.++.|.
T Consensus 220 ~~~~-~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~ 261 (310)
T 3mv2_B 220 LHLQ-QRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQ 261 (310)
T ss_dssp HHHH-HTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHH
T ss_pred HHHH-cCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHH
Confidence 4555 67777777777766655 36666666543
No 206
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.42 E-value=7.8e-07 Score=74.03 Aligned_cols=93 Identities=11% Similarity=0.079 Sum_probs=58.9
Q ss_pred chhhcCCChHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----CHHHHHHH--HHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANP--GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPG----DGNILSLY--ADLI 134 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P--~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~----~~~al~~l--A~~l 134 (167)
.+|...+++++|++++.+.|..+| .+.+++..++.++. .+++.+.|.+.+++..+++|+ +-.++..+ +++.
T Consensus 108 ~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L-~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~ 186 (310)
T 3mv2_B 108 TAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVAL-LNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIK 186 (310)
T ss_dssp HHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHH
Confidence 345566777777777777777765 66666666666664 677777777777777777772 12222233 3344
Q ss_pred HHHcC--CHHHHHHHHHHHHHhCCC
Q 046296 135 WQAHK--DASRAESYFDQAVKSAPD 157 (167)
Q Consensus 135 ~~~~g--~~~eA~~~~e~Al~l~P~ 157 (167)
+. .+ ++++|..+|+++.+..|+
T Consensus 187 l~-~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 187 FA-TNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HH-HTCSTTTHHHHHHHHHHTTSCS
T ss_pred HH-hCCccHHHHHHHHHHHHHhCCC
Confidence 44 44 677777777777666665
No 207
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.37 E-value=2.2e-06 Score=77.94 Aligned_cols=81 Identities=5% Similarity=-0.089 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 046296 72 SSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAE-ELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQ 150 (167)
Q Consensus 72 d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~-~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~ 150 (167)
++....|++||...|.++.+|..++.++. ..++.++|. ..|++|+...|.+..++..++.+... .+++++|.++|++
T Consensus 326 ~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~-~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~-~~~~e~aR~iyek 403 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCFAPEIWFNMANYQG-EKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYEL-NTKIPEIETTILS 403 (679)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHH-HHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCCHHHHHHHHHH
Confidence 45678899999999999999999999886 788889997 99999999999999999999999998 9999999999999
Q ss_pred HHHh
Q 046296 151 AVKS 154 (167)
Q Consensus 151 Al~l 154 (167)
++..
T Consensus 404 ~l~~ 407 (679)
T 4e6h_A 404 CIDR 407 (679)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9985
No 208
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.30 E-value=4.5e-06 Score=69.10 Aligned_cols=78 Identities=10% Similarity=-0.010 Sum_probs=63.4
Q ss_pred hCCCCHHHHHHHHHHHHHH----cC------CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHc-----CCHHHHHH
Q 046296 84 ANPGNALLLGNYARFLKEV----RG------DFAKAEELCGRAILANPG--DGNILSLYADLIWQAH-----KDASRAES 146 (167)
Q Consensus 84 l~P~n~~~l~~lA~~l~~~----~g------d~e~A~~~~~rAl~l~P~--~~~al~~lA~~l~~~~-----g~~~eA~~ 146 (167)
.+|+++.+++..+..+... .+ ...+|+..++|||+++|+ +..++..++.+|.. . |+.++|++
T Consensus 147 ~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~-vPp~~gGd~ekA~~ 225 (301)
T 3u64_A 147 CTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAA-APESFGGGMEKAHT 225 (301)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHH-SCTTTTCCHHHHHH
T ss_pred cCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHh-CCCccCCCHHHHHH
Confidence 4667788888877765421 12 268999999999999999 77799999999887 5 99999999
Q ss_pred HHHHHHHhCCCC-HHHH
Q 046296 147 YFDQAVKSAPDD-WLNL 162 (167)
Q Consensus 147 ~~e~Al~l~P~~-~~~l 162 (167)
+|++||+++|+. ..+.
T Consensus 226 ~ferAL~LnP~~~id~~ 242 (301)
T 3u64_A 226 AFEHLTRYCSAHDPDHH 242 (301)
T ss_dssp HHHHHHHHCCTTCSHHH
T ss_pred HHHHHHHhCCCCCchHH
Confidence 999999999975 5444
No 209
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.30 E-value=1.7e-06 Score=65.13 Aligned_cols=63 Identities=10% Similarity=-0.034 Sum_probs=56.9
Q ss_pred ChHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 046296 70 GSSSTDAYNEKMIEAN-P-GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL 133 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~-P-~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~ 133 (167)
++++++.+|+.+++.+ | ++.++++++|..++ ..++|++|+++++++|+++|+|..+....-.+
T Consensus 50 ~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~-kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 50 DIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNY-RLKEYEKALKYVRGLLQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH-HTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCccchHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 6789999999999999 8 67999999999987 89999999999999999999999888765443
No 210
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.28 E-value=5.1e-06 Score=68.37 Aligned_cols=91 Identities=12% Similarity=0.094 Sum_probs=75.2
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPG------NALLLGNYARFLKEVRGDFAKAEELCGRAILA------NPGDGNILSLYA 131 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~------n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l------~P~~~~al~~lA 131 (167)
++...+++++|+.++++++...+. -..++.++|.++. ..+++++|+.++++++.. .|....++..++
T Consensus 104 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 182 (434)
T 4b4t_Q 104 FEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHY-QKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLES 182 (434)
T ss_dssp HCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHH-HccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHH
Confidence 344567889999999998876443 2567889999886 799999999999999876 345578888999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC
Q 046296 132 DLIWQAHKDASRAESYFDQAVKSAP 156 (167)
Q Consensus 132 ~~l~~~~g~~~eA~~~~e~Al~l~P 156 (167)
.++.. ++++++|+.+|++++.+.|
T Consensus 183 ~~~~~-~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 183 KVYHK-LRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHH-hCcHHHHHHHHHHHHHHhh
Confidence 99999 9999999999999998743
No 211
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.20 E-value=4.6e-05 Score=56.73 Aligned_cols=91 Identities=11% Similarity=-0.108 Sum_probs=73.4
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHcCCHHHHH
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRG---DFAKAEELCGRAILANP-GDGNILSLYADLIWQAHKDASRAE 145 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~g---d~e~A~~~~~rAl~l~P-~~~~al~~lA~~l~~~~g~~~eA~ 145 (167)
++......|.+-+. ++-++.+.++||+.|. ... +..+++.+++..++.+| ..-+.++.+|..+++ .++|++|+
T Consensus 21 eL~~lr~qY~~E~~-~~vs~~t~F~YAw~Lv-~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~yk-l~~Y~~Ar 97 (144)
T 1y8m_A 21 QLEILRQQVVSEGG-PTATIQSRFNYAWGLI-KSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAK 97 (144)
T ss_dssp HHHHHHHHHHHTTS-TTSCHHHHHHHHHHHH-HSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHT-TTCHHHHH
T ss_pred HHHHHHHHHHHhcc-CCCcHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHH-hhhHHHHH
Confidence 34455555554322 3668999999999886 444 45789999999999999 567889999999999 99999999
Q ss_pred HHHHHHHHhCCCCHHHHH
Q 046296 146 SYFDQAVKSAPDDWLNLI 163 (167)
Q Consensus 146 ~~~e~Al~l~P~~~~~l~ 163 (167)
++.+.+|++.|+|..+..
T Consensus 98 ~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 98 RYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp HHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHhcCCCcHHHHH
Confidence 999999999999987653
No 212
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.16 E-value=1.9e-05 Score=58.18 Aligned_cols=90 Identities=11% Similarity=-0.102 Sum_probs=72.8
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHcCCHHHHH
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRG---DFAKAEELCGRAILANP-GDGNILSLYADLIWQAHKDASRAE 145 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~g---d~e~A~~~~~rAl~l~P-~~~~al~~lA~~l~~~~g~~~eA~ 145 (167)
++....+-|++-+ ...-.+.+.++||+.|. ... +..+++.+++..++.+| ..-+.++.+|..+++ .++|++|+
T Consensus 22 eL~~l~~qy~~E~-~~~vs~qt~F~yAw~Lv-~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yk-lgdY~~Ar 98 (134)
T 3o48_A 22 QLEILRQQVVSEG-GPTATIQSRFNYAWGLI-KSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAK 98 (134)
T ss_dssp HHHHHHHHHHHTT-GGGSCHHHHHHHHHHHH-HSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH-HTCHHHHH
T ss_pred HHHHHHHHHHHHh-CCCCChhhHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHH-hhhHHHHH
Confidence 4455555555533 33336899999999886 444 35689999999999999 457899999999999 99999999
Q ss_pred HHHHHHHHhCCCCHHHH
Q 046296 146 SYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 146 ~~~e~Al~l~P~~~~~l 162 (167)
++.+.+|++.|+|..+.
T Consensus 99 ~y~d~lL~~eP~N~QA~ 115 (134)
T 3o48_A 99 RYVDTLFEHERNNKQVG 115 (134)
T ss_dssp HHHHHHHTTCTTCHHHH
T ss_pred HHHHHHHhhCCCCHHHH
Confidence 99999999999998765
No 213
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.16 E-value=1.7e-05 Score=72.16 Aligned_cols=93 Identities=15% Similarity=0.130 Sum_probs=80.9
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC---HHHHHHH
Q 046296 71 SSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKD---ASRAESY 147 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~---~~eA~~~ 147 (167)
..+-+..|+++|..+|.|...|..|+..+. ..++++.+...|++++...|.....|..|+..... .++ ++.+..+
T Consensus 48 ~~d~i~~lE~~l~~np~d~~~W~~yi~~~~-~~~~~~~aR~vyEraL~~fP~~~~lW~~Yi~~E~~-~~~~~~~~~v~~l 125 (679)
T 4e6h_A 48 ESDVIGKLNDMIEEQPTDIFLYVKLLKHHV-SLKQWKQVYETFDKLHDRFPLMANIWCMRLSLEFD-KMEELDAAVIEPV 125 (679)
T ss_dssp CSCHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-C--CCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHCcCCHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHh-hCCcchHHHHHHH
Confidence 445677899999999999999999999875 78899999999999999999999999999999887 888 9999999
Q ss_pred HHHHHHhCC--CCHHHHHhc
Q 046296 148 FDQAVKSAP--DDWLNLIKL 165 (167)
Q Consensus 148 ~e~Al~l~P--~~~~~l~~y 165 (167)
|++||...| .++.+|..|
T Consensus 126 feRal~~~~~~~sv~LW~~Y 145 (679)
T 4e6h_A 126 LARCLSKELGNNDLSLWLSY 145 (679)
T ss_dssp HHHHTCSSSCCCCHHHHHHH
T ss_pred HHHHHHhcCCCCCHHHHHHH
Confidence 999999984 566666554
No 214
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.02 E-value=1e-05 Score=66.57 Aligned_cols=90 Identities=16% Similarity=0.076 Sum_probs=74.6
Q ss_pred chhhcCCChHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CC----HHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEA------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANP---GD----GNILSL 129 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l------~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P---~~----~~al~~ 129 (167)
.+|...+++++|+.++++++.. .|....++..++.++. ..+++++|..++++|+.+.| .. ..++..
T Consensus 143 ~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 221 (434)
T 4b4t_Q 143 TLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYH-KLRNLAKSKASLTAARTAANSIYCPTQTVAELDLM 221 (434)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHH
Confidence 5788889999999999999887 3444678889998886 89999999999999998753 33 345566
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 130 YADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 130 lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
++.++.. .+++++|..+|.++++.
T Consensus 222 ~g~~~~~-~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 222 SGILHCE-DKDYKTAFSYFFESFES 245 (434)
T ss_dssp HHHHTTS-SSCHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHhHHHHHHHHHHHHHH
Confidence 7777777 89999999999999875
No 215
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.00 E-value=2.4e-05 Score=76.36 Aligned_cols=65 Identities=14% Similarity=0.052 Sum_probs=60.2
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 046296 86 PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPD 157 (167)
Q Consensus 86 P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~ 157 (167)
.+.+.+|+.+|.++. ..+++++|+.+|.+| +++..+..++.++.+ .+++++|+++|+.|++..|+
T Consensus 1102 vn~p~vWsqLAKAql-~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~-lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1102 CNEPAVWSQLAKAQL-QKGMVKEAIDSYIKA-----DDPSSYMEVVQAANT-SGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred cCCHHHHHHHHHHHH-hCCCHHHHHHHHHhc-----CChHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhccc
Confidence 478999999999886 899999999999887 999999999999999 99999999999999998865
No 216
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.91 E-value=9.3e-05 Score=55.80 Aligned_cols=88 Identities=14% Similarity=0.079 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH
Q 046296 72 SSTDAYNEKMIEANPGN--------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASR 143 (167)
Q Consensus 72 d~A~~~~~kAL~l~P~n--------~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~e 143 (167)
++-...|++|+..-|-. ...|..||.+. ..+|.++|...|+.++.+....+-+|..+|.+-.. +++..+
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~~--ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiR-qgnl~k 112 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK--AIQEPDDARDYFQMARANCKKFAFVHISFAQFELS-QGNVKK 112 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHHH--HHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHH-TTCHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cccHHH
Confidence 78889999999987753 45677888663 46999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHhCCCCHHHH
Q 046296 144 AESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 144 A~~~~e~Al~l~P~~~~~l 162 (167)
|.+.+.+||.+.|.....+
T Consensus 113 ARkILg~AiG~~~k~~~~l 131 (161)
T 4h7y_A 113 SKQLLQKAVERGAVPLEML 131 (161)
T ss_dssp HHHHHHHHHHTTCBCHHHH
T ss_pred HHHHHHHHhccCCCcHHHH
Confidence 9999999999999877654
No 217
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.89 E-value=2.7e-05 Score=59.31 Aligned_cols=100 Identities=16% Similarity=0.068 Sum_probs=76.1
Q ss_pred hhcCCChHHHHHHHHHHHHhCCCCHH---------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CC----------
Q 046296 65 SNNNHGSSSTDAYNEKMIEANPGNAL---------LLGNYARFLKEVRGDFAKAEELCGRAILAN---PG---------- 122 (167)
Q Consensus 65 y~~~g~~d~A~~~~~kAL~l~P~n~~---------~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~---P~---------- 122 (167)
....+.|+.|+.....++.+..+++. ++..+|..++ ..++|.+|+..|++||.+. |+
T Consensus 30 L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf-~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~ 108 (167)
T 3ffl_A 30 MAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLF-HDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGN 108 (167)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHCC------------
T ss_pred HHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHHhcCCCccccccc
Confidence 34557899999999887777544443 7788899998 7999999999999997642 11
Q ss_pred ------------CHHHHHHHHHHHHHHcCCHHHHHHHHHHH--HHhCCCCHHHHHhcc
Q 046296 123 ------------DGNILSLYADLIWQAHKDASRAESYFDQA--VKSAPDDWLNLIKLY 166 (167)
Q Consensus 123 ------------~~~al~~lA~~l~~~~g~~~eA~~~~e~A--l~l~P~~~~~l~~yy 166 (167)
+.++.+.+|.|+.+ .+++.+|+.+++.. -...|.-...++++|
T Consensus 109 ~ss~p~s~~~~~e~Elkykia~C~~~-l~~~~~Ai~~Le~Ip~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 109 SASTPQSQCLPSEIEVKYKLAECYTV-LKQDKDAIAILDGIPSRQRTPKINMLLANLY 165 (167)
T ss_dssp --------CCCCHHHHHHHHHHHHHH-TTCHHHHHHHHHTSCGGGCCHHHHHHHHHHC
T ss_pred cCCCcccccccchHHHHHHHHHHHHH-HCCHHHHHHHHhcCCchhcCHHHHHHHHHHh
Confidence 12688999999999 99999999998874 334555556667776
No 218
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.89 E-value=3.9e-05 Score=74.82 Aligned_cols=91 Identities=9% Similarity=0.022 Sum_probs=72.4
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------------------
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANP-------------------- 121 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P-------------------- 121 (167)
+..+++.+++++|+.+|++| ..|..++.++. ..+++++|++.+++|....+
T Consensus 1202 Gd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLv-kLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~c 1272 (1630)
T 1xi4_A 1202 GDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLV-HLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMC 1272 (1630)
T ss_pred HHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHH-HhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHH
Confidence 35677889999999999996 47788888886 78999999999999854443
Q ss_pred -----CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 122 -----GDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 122 -----~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l 162 (167)
.+++.+..++..|.. +|.|++|+.+++++|.++|.+...+
T Consensus 1273 gl~Iiv~~deLeeli~yYe~-~G~feEAI~LlE~aL~LeraH~gmf 1317 (1630)
T 1xi4_A 1273 GLHIVVHADELEELINYYQD-RGYFEELITMLEAALGLERAHMGMF 1317 (1630)
T ss_pred HHhhhcCHHHHHHHHHHHHH-cCCHHHHHHHHHHHhccChhHhHHH
Confidence 244455566667777 9999999999999999998775443
No 219
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.88 E-value=3.2e-05 Score=67.26 Aligned_cols=88 Identities=9% Similarity=0.029 Sum_probs=59.9
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------------------
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANP--------------------- 121 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P--------------------- 121 (167)
..++..+.+++|+.+|.++ ..|..++.++. ..+++++|++.+++|. +|
T Consensus 130 d~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~-~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv~~~ef~lA~~ 198 (449)
T 1b89_A 130 DRCYDEKMYDAAKLLYNNV--------SNFGRLASTLV-HLGEYQAAVDGARKAN--STRTWKEVCFACVDGKEFRLAQM 198 (449)
T ss_dssp -------CTTTHHHHHHHT--------TCHHHHHHHHH-TTTCHHHHHHHHHHHT--CHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHH-HhccHHHHHHHHHHcC--CchhHHHHHHHHHHcCcHHHHHH
Confidence 4667778899999999877 35777888887 7888888888888882 22
Q ss_pred ------CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 122 ------GDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNL 162 (167)
Q Consensus 122 ------~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l 162 (167)
.+|.-+..+..+|.. .|++++|+.++++++.++|.....+
T Consensus 199 ~~l~L~~~ad~l~~lv~~Yek-~G~~eEai~lLe~aL~le~ah~~~f 244 (449)
T 1b89_A 199 CGLHIVVHADELEELINYYQD-RGYFEELITMLEAALGLERAHMGMF 244 (449)
T ss_dssp TTTTTTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHTTSTTCCHHHH
T ss_pred HHHHHHhCHhhHHHHHHHHHH-CCCHHHHHHHHHHHhCCcHHHHHHH
Confidence 122222334455666 8999999999999999998775444
No 220
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.88 E-value=3.1e-05 Score=66.76 Aligned_cols=68 Identities=13% Similarity=0.027 Sum_probs=56.7
Q ss_pred cchhhcCCChHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHH
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILA-----NPGDGNILS 128 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l-----~P~n~---~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l-----~P~~~~al~ 128 (167)
+.+|..++++++|+.+|+++|++ -|++| ..++++|.++. .++++++|+.+|++|+++ -|++|.+..
T Consensus 347 a~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~-~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 425 (433)
T 3qww_A 347 MGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYM-GLENKAAGEKALKKAIAIMEVAHGKDHPYISE 425 (433)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHH
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 35788999999999999999987 45555 56789999887 899999999999999986 588887654
Q ss_pred HH
Q 046296 129 LY 130 (167)
Q Consensus 129 ~l 130 (167)
..
T Consensus 426 l~ 427 (433)
T 3qww_A 426 IK 427 (433)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 221
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.81 E-value=5.5e-05 Score=64.34 Aligned_cols=59 Identities=12% Similarity=0.045 Sum_probs=52.1
Q ss_pred hcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 046296 66 NNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNI 126 (167)
Q Consensus 66 ~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~a 126 (167)
..++++++|+.++++|++++|+ ..++..++.++. ..|++++|++.|++|++++|..+..
T Consensus 288 l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~-~~G~~~eA~e~~~~AlrL~P~~~t~ 346 (372)
T 3ly7_A 288 LVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYE-MKGMNREAADAYLTAFNLRPGANTL 346 (372)
T ss_dssp HHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCSHHHH
T ss_pred HhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCcChH
Confidence 3468999999999999999975 777888888876 8999999999999999999988743
No 222
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.78 E-value=0.00021 Score=62.05 Aligned_cols=58 Identities=16% Similarity=0.107 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 046296 71 SSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLY 130 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~l 130 (167)
.++....|+++|...|..+.+|..|+.++. ..++.++|...|++|+.. |.+...+..+
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~-~~~~~~~ar~i~erAi~~-P~~~~l~~~y 252 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLI-GIGQKEKAKKVVERGIEM-SDGMFLSLYY 252 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH-CCSSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhC-CCcHHHHHHH
Confidence 345666777777777777777777777664 677777777777777777 7665444433
No 223
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.77 E-value=0.00028 Score=61.32 Aligned_cols=98 Identities=13% Similarity=0.068 Sum_probs=69.1
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH---------------------------------------HHc
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLK---------------------------------------EVR 103 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~---------------------------------------~~~ 103 (167)
.++.+.++.++|...|++|++. |.+...|..++.++. ...
T Consensus 221 ~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~ 299 (493)
T 2uy1_A 221 EYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKK 299 (493)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHc
Confidence 3456678999999999999999 999888887766410 013
Q ss_pred CCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 104 GDFAKAEELCGRAILANPG-DGNILSLYADLIWQA--HKDASRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 104 gd~e~A~~~~~rAl~l~P~-~~~al~~lA~~l~~~--~g~~~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
++++.|...|++| + .|. ... ..+..++++. .++.+.|.++|+++++.-|+++..+..|
T Consensus 300 ~~~~~AR~i~~~A-~-~~~~~~~--v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~y 360 (493)
T 2uy1_A 300 RGLELFRKLFIEL-G-NEGVGPH--VFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEF 360 (493)
T ss_dssp HCHHHHHHHHHHH-T-TSCCCHH--HHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCHHHHHHHHHHh-h-CCCCChH--HHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 4577888888888 3 443 333 3344566551 2368889999999999888888765543
No 224
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.75 E-value=3e-05 Score=66.59 Aligned_cols=66 Identities=14% Similarity=0.039 Sum_probs=55.0
Q ss_pred chhhcCCChHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAILA-----NPGDGNILSL 129 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l-----~P~n~---~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l-----~P~~~~al~~ 129 (167)
.+|..++++++|+.+++++|++ -|++| ..++++|.++. .++++++|+.+|++|+++ -|++|.+...
T Consensus 337 ~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~-~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~ 415 (429)
T 3qwp_A 337 DACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQL-HQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDL 415 (429)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Confidence 4688899999999999999976 46665 45788999887 899999999999999976 5777766543
No 225
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.53 E-value=0.00017 Score=52.50 Aligned_cols=64 Identities=9% Similarity=-0.032 Sum_probs=55.2
Q ss_pred CChHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 046296 69 HGSSSTDAYNEKMIEAN-P-GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL 133 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~-P-~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~ 133 (167)
.+..+++.+++..++.+ | ...+.++.+|..++ +.++|++|..+++.+|+++|+|..+......+
T Consensus 52 ~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~y-klg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 52 DDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNY-RLKEYEKALKYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp HHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 34567999999999987 6 67789999999887 89999999999999999999999988765443
No 226
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=97.49 E-value=0.0018 Score=52.84 Aligned_cols=92 Identities=18% Similarity=0.133 Sum_probs=77.0
Q ss_pred hhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-----------
Q 046296 65 SNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL----------- 133 (167)
Q Consensus 65 y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~----------- 133 (167)
..+.+++++|+...+..|+.+|.|+.....|..+|+ ..|++++|.+-++-+.+++|........|-.+
T Consensus 7 ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLc-v~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~~R~~vf 85 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKASPKDASLRSSFIELLC-IDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARKDFA 85 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 456689999999999999999999999999999998 89999999999999999999876554443222
Q ss_pred ------------------------HHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 134 ------------------------IWQAHKDASRAESYFDQAVKSAPDD 158 (167)
Q Consensus 134 ------------------------l~~~~g~~~eA~~~~e~Al~l~P~~ 158 (167)
... .|+.++|..+-.+|++..|..
T Consensus 86 aG~~~P~~~g~~~~w~~~ll~Al~~~~-~G~~~~A~~lr~~A~e~ap~~ 133 (273)
T 1zbp_A 86 QGAATAKVLGENEELTKSLVSFNLSMV-SQDYEQVSELALQIEELRQEK 133 (273)
T ss_dssp TSCCCEECCCSCHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCCCC
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHhh-cCCHHHHHHHHHHHHhcCccc
Confidence 222 578899999999998888764
No 227
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.37 E-value=0.00064 Score=49.95 Aligned_cols=64 Identities=6% Similarity=-0.041 Sum_probs=56.0
Q ss_pred CChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 046296 69 HGSSSTDAYNEKMIEANPG-NALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL 133 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~-n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~ 133 (167)
.+..+++.+++..++.+|. ..+.++.+|..++ +.++|++|..+++++|+++|+|..+......+
T Consensus 57 ~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~y-klgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 57 NDERLGVKILTDIYKEAESRRRECLYYLTIGCY-KLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHH-HhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 3567899999999999994 5788999998887 89999999999999999999999988765443
No 228
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.35 E-value=3e-05 Score=67.44 Aligned_cols=89 Identities=9% Similarity=-0.031 Sum_probs=71.4
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCC-----CCHHHHHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKE-VRGDFAKAEELCGRAILANP-----GDGNILSLYADLIWQ 136 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~-~~gd~e~A~~~~~rAl~l~P-----~~~~al~~lA~~l~~ 136 (167)
.+|.+.+.+++|+.+|+++|.++|.+...+..++.++.. ..+++.++++.|...|.+.| .++..|..+..+|..
T Consensus 215 ~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~ 294 (449)
T 1b89_A 215 NYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDK 294 (449)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHh
Confidence 468888999999999999999999999999999876641 12345666677777777778 888889999989988
Q ss_pred HcCCHHHHHHHHHHHH
Q 046296 137 AHKDASRAESYFDQAV 152 (167)
Q Consensus 137 ~~g~~~eA~~~~e~Al 152 (167)
.++|+.|+..+-+..
T Consensus 295 -~~e~d~A~~tm~~h~ 309 (449)
T 1b89_A 295 -YEEYDNAIITMMNHP 309 (449)
T ss_dssp -TTCHHHHHHHHHHST
T ss_pred -hchHHHHHHHHHhCC
Confidence 999999887665554
No 229
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.33 E-value=0.001 Score=49.40 Aligned_cols=64 Identities=6% Similarity=-0.041 Sum_probs=55.5
Q ss_pred CChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 046296 69 HGSSSTDAYNEKMIEANPG-NALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL 133 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~-n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~ 133 (167)
.+..+++.+++..++..|. ..+.++.+|..++ +.++|++|..+++.+|+++|+|..+......+
T Consensus 56 ~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~y-kl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~I 120 (144)
T 1y8m_A 56 NDERLGVKILTDIYKEAESRRRECLYYLTIGCY-KLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 120 (144)
T ss_dssp HHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccchhHHHHHHHHHHH-HhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 4567899999999999994 6788899998887 89999999999999999999999887665443
No 230
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.27 E-value=0.0006 Score=51.37 Aligned_cols=79 Identities=19% Similarity=0.035 Sum_probs=62.3
Q ss_pred HhCCCCHHHHHHHHHHHHHHcCCH------HHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHcCCHHHHHHHH
Q 046296 83 EANPGNALLLGNYARFLKEVRGDF------AKAEELCGRAILANPG--------DGNILSLYADLIWQAHKDASRAESYF 148 (167)
Q Consensus 83 ~l~P~n~~~l~~lA~~l~~~~gd~------e~A~~~~~rAl~l~P~--------~~~al~~lA~~l~~~~g~~~eA~~~~ 148 (167)
-+.|+|++.|..|...+. ..++. ++-+..|+||+..-|- ....|..||.+ .. .++.++|.++|
T Consensus 7 ~~~p~~yd~W~~yl~llE-~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~e-i~D~d~aR~vy 83 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLE-KNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KA-IQEPDDARDYF 83 (161)
T ss_dssp ---CCSHHHHHHHHHHHH-HHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HH-HHCGGGCHHHH
T ss_pred eeCCCCHHHHHHHHHHHH-HcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HH-hcCHHHHHHHH
Confidence 468999999999998885 67888 8999999999999885 35677788866 45 69999999999
Q ss_pred HHHHHhCCCCHHHHHh
Q 046296 149 DQAVKSAPDDWLNLIK 164 (167)
Q Consensus 149 e~Al~l~P~~~~~l~~ 164 (167)
+.++++....+.++..
T Consensus 84 ~~a~~~hKkFAKiwi~ 99 (161)
T 4h7y_A 84 QMARANCKKFAFVHIS 99 (161)
T ss_dssp HHHHHHCTTBHHHHHH
T ss_pred HHHHHHhHHHHHHHHH
Confidence 9999985555544433
No 231
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.77 E-value=0.0052 Score=56.59 Aligned_cols=59 Identities=17% Similarity=0.086 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 046296 91 LLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQA 151 (167)
Q Consensus 91 ~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~A 151 (167)
.+..-+.||. .+++++-|+++.++|+.+.|.+...|+.|+.+|.. +++|+.|+-.+.-+
T Consensus 339 LL~~Qa~FLl-~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~-l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLL-NRGDYELALGVSNTSTELALDSFESWYNLARCHIK-KEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH-TTCHHHHHHHHHHS
T ss_pred HHHHHHHHHh-ccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHH-hccHHHHHHHHhcC
Confidence 3444566775 78999999999999999999999999999999999 99999998765544
No 232
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.75 E-value=0.0072 Score=53.06 Aligned_cols=71 Identities=15% Similarity=0.083 Sum_probs=59.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 93 GNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 93 ~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
..++.+.. .+..+..|..+|.+|+.++|++...++.+|.+... +++.-+|+-+|-+++......+.+..|+
T Consensus 156 ~~LGDL~R-Y~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~-~~~~l~a~y~y~rsl~~~~Pf~~a~~nL 226 (497)
T 1ya0_A 156 VHLGDIAR-YRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS-KGDHLTTIFYYCRSIAVKFPFPAASTNL 226 (497)
T ss_dssp HHHHHHHH-HTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHH-TTCHHHHHHHHHHHHSSSBCCHHHHHHH
T ss_pred HHcccHHH-HHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhc-ccccHHHHHHHHHHHhcCCCChhHHHHH
Confidence 34555443 56778999999999999999999999999999998 9999999999999998877777766654
No 233
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.70 E-value=0.024 Score=47.63 Aligned_cols=83 Identities=8% Similarity=-0.035 Sum_probs=65.3
Q ss_pred CChHHHHHHHHHHHHhCCCCHH----------------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 046296 69 HGSSSTDAYNEKMIEANPGNAL----------------------LLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNI 126 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~n~~----------------------~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~a 126 (167)
++.+.|...+++|+.+....+. ++..++..+. ..+++.+|+..+++++..+|-+-.+
T Consensus 129 ~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l-~~g~~~~a~~~l~~~~~~~P~~E~~ 207 (388)
T 2ff4_A 129 GRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEI-ACGRASAVIAELEALTFEHPYREPL 207 (388)
T ss_dssp TCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHH
Confidence 5677888889999988533211 1112233332 5799999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 127 LSLYADLIWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 127 l~~lA~~l~~~~g~~~eA~~~~e~Al~ 153 (167)
+..+-.+|.. .|+..+|++.|+++.+
T Consensus 208 ~~~lm~al~~-~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 208 WTQLITAYYL-SDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHT-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 9999999999 9999999999998755
No 234
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.63 E-value=0.0066 Score=49.49 Aligned_cols=59 Identities=29% Similarity=0.359 Sum_probs=55.4
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 046296 102 VRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWLN 161 (167)
Q Consensus 102 ~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~ 161 (167)
..+++++|++.+...|+.+|.|+.....|..+|.. .|++++|.+.++.+.+++|+....
T Consensus 9 ~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv-~G~w~RA~~QL~~~a~l~p~~~~~ 67 (273)
T 1zbp_A 9 SEGQLQQALELLIEAIKASPKDASLRSSFIELLCI-DGDFERADEQLMQSIKLFPEYLPG 67 (273)
T ss_dssp TTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred hCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhCchhhHH
Confidence 57999999999999999999999999999999998 999999999999999999987543
No 235
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.62 E-value=0.031 Score=48.55 Aligned_cols=83 Identities=17% Similarity=-0.007 Sum_probs=43.5
Q ss_pred CChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHcCCHHHHHH
Q 046296 69 HGSSSTDAYNEKMIEANPG-NALLLGNYARFLKEVRGDFAKAEELCGRAILAN-PGDGNILSLYADLIWQAHKDASRAES 146 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~-n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~-P~~~~al~~lA~~l~~~~g~~~eA~~ 146 (167)
+.+++|...|+++.+..-. |...++.+...+. ..+++++|+++|++..+.. +-+..++..+-..+.+ .|+.++|.+
T Consensus 84 ~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~-~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~-~g~~~~A~~ 161 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKVVPNEATFTNGARLAV-AKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCR-KGDADKAYE 161 (501)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHH-CCCHHHHHH
Confidence 3456666666665554211 3444444444444 4566666666666655432 1234444444445555 566666666
Q ss_pred HHHHHHH
Q 046296 147 YFDQAVK 153 (167)
Q Consensus 147 ~~e~Al~ 153 (167)
+|++.++
T Consensus 162 l~~~M~~ 168 (501)
T 4g26_A 162 VDAHMVE 168 (501)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6665554
No 236
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.41 E-value=0.006 Score=46.30 Aligned_cols=57 Identities=18% Similarity=0.226 Sum_probs=46.7
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 96 ARFLKEVRGDFAKAEELCGRAILANPGDG---------NILSLYADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 96 A~~l~~~~gd~e~A~~~~~rAl~l~P~~~---------~al~~lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
...+. ..+.|+.|+.....++.+..+++ .++..+|.+++. +++|.+|+.+|++||++
T Consensus 27 ik~L~-d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~-~~eyrrA~~~y~qALq~ 92 (167)
T 3ffl_A 27 VRDMA-AAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFH-DKEYRNAVSKYTMALQQ 92 (167)
T ss_dssp HHHHH-HTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHH-HhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHH
Confidence 33454 58899999999999877754443 488899999999 99999999999999775
No 237
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.95 E-value=0.089 Score=45.63 Aligned_cols=93 Identities=12% Similarity=0.031 Sum_probs=73.5
Q ss_pred hhhcCCChHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHcCC
Q 046296 64 YSNNNHGSSSTDAYNEKMIEA--NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANP-GDGNILSLYADLIWQAHKD 140 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l--~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P-~~~~al~~lA~~l~~~~g~ 140 (167)
.|.+.+++++|..+|+++.+. .| +...++.+-..+. ..+++++|.++|++.++..- -+..++..+-.++.+ .|+
T Consensus 114 ~~~~~g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~-~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~-~g~ 190 (501)
T 4g26_A 114 LAVAKDDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFC-RKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMD-TKN 190 (501)
T ss_dssp HHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-TTC
T ss_pred HHHhcCCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHH-HCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhh-CCC
Confidence 567789999999999999886 34 4556666666665 79999999999999887642 355667777788888 999
Q ss_pred HHHHHHHHHHHHHh--CCCCH
Q 046296 141 ASRAESYFDQAVKS--APDDW 159 (167)
Q Consensus 141 ~~eA~~~~e~Al~l--~P~~~ 159 (167)
.++|.++|++..+. .|+..
T Consensus 191 ~d~A~~ll~~Mr~~g~~ps~~ 211 (501)
T 4g26_A 191 ADKVYKTLQRLRDLVRQVSKS 211 (501)
T ss_dssp HHHHHHHHHHHHHHTSSBCHH
T ss_pred HHHHHHHHHHHHHhCCCcCHH
Confidence 99999999998664 56544
No 238
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.94 E-value=0.023 Score=49.81 Aligned_cols=68 Identities=13% Similarity=0.101 Sum_probs=60.0
Q ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 046296 68 NHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQ 136 (167)
Q Consensus 68 ~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~ 136 (167)
+..+..|..+|++|+.++|++...++.+|.+.. ..++.-+|+-+|-|++......+.+..++..++-.
T Consensus 165 ~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~-~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 165 RNQTSQAESYYRHAAQLVPSNGQPYNQLAILAS-SKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp TTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHH-HTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHh-cccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 456789999999999999999999999998775 68899999999999999888888888888776654
No 239
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.03 E-value=0.11 Score=45.74 Aligned_cols=65 Identities=14% Similarity=-0.005 Sum_probs=42.9
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH--------HHhCCCCHHHHHHHHHHHHH------------HcCCHHHH
Q 046296 85 NPGNALLLGNYARFLKEVRGDFAKAEELCGRA--------ILANPGDGNILSLYADLIWQ------------AHKDASRA 144 (167)
Q Consensus 85 ~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rA--------l~l~P~~~~al~~lA~~l~~------------~~g~~~eA 144 (167)
..+++..|..+|..+. ..++++.|+.+|.++ |.....+...+..++..... ..+++++|
T Consensus 677 ~~~~~~~W~~la~~al-~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a 755 (814)
T 3mkq_A 677 DESAEMKWRALGDASL-QRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGA 755 (814)
T ss_dssp TCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHH
T ss_pred hhCcHhHHHHHHHHHH-HcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHH
Confidence 4578999999999875 899999999999985 22234555544444333322 15666666
Q ss_pred HHHHHH
Q 046296 145 ESYFDQ 150 (167)
Q Consensus 145 ~~~~e~ 150 (167)
+++|.+
T Consensus 756 ~~~~~~ 761 (814)
T 3mkq_A 756 KDLLIK 761 (814)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665544
No 240
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.10 E-value=0.21 Score=45.88 Aligned_cols=94 Identities=12% Similarity=0.134 Sum_probs=64.4
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh--------CCCC----------HHHHHHHH
Q 046296 71 SSSTDAYNEKMIEANPGNALLLGNYARFLKEV-RGDFAKAEELCGRAILA--------NPGD----------GNILSLYA 131 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~-~gd~e~A~~~~~rAl~l--------~P~~----------~~al~~lA 131 (167)
++.|+.+|++..+.+|.+...+......+.+. ..+--+|+.++.++++. .|.+ ...+..-+
T Consensus 265 ~~~a~~~le~L~~~~p~~~~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa 344 (754)
T 4gns_B 265 VDFTIDYLKGLTKKDPIHDIYYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQT 344 (754)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHH
Confidence 57899999999999998765433211111111 12345677777777642 3333 23455557
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhc
Q 046296 132 DLIWQAHKDASRAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 132 ~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
.++.. +++++-|+++.++|+.+.|++...|+.+
T Consensus 345 ~FLl~-K~~~elAL~~Ak~AV~~aPseF~tW~~L 377 (754)
T 4gns_B 345 NFLLN-RGDYELALGVSNTSTELALDSFESWYNL 377 (754)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred HHHhc-cCcHHHHHHHHHHHHhcCchhhHHHHHH
Confidence 77787 9999999999999999999998777654
No 241
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=94.05 E-value=0.72 Score=35.70 Aligned_cols=73 Identities=15% Similarity=0.036 Sum_probs=54.8
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----------------hCCCCHHHH-HHHHHHHHHHcCCHHHHHHHH
Q 046296 87 GNALLLGNYARFLKEVRGDFAKAEELCGRAIL-----------------ANPGDGNIL-SLYADLIWQAHKDASRAESYF 148 (167)
Q Consensus 87 ~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~-----------------l~P~~~~al-~~lA~~l~~~~g~~~eA~~~~ 148 (167)
+-..+.+.-+.++. ...++.+|+..+++.|+ ++|.+-+.. ..+|.++.+ .++.+||+.+|
T Consensus 60 NT~Ts~YYk~LCy~-klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq-~g~r~EaI~y~ 137 (242)
T 3kae_A 60 NTCTSKYYESLCYK-KKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTL-SGYREEGIGHY 137 (242)
T ss_dssp CBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred chHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHH-hcCHHHhhhHh
Confidence 34445555555665 78999999999999982 245555544 467888888 99999999999
Q ss_pred HHHHHhCCCCHHH
Q 046296 149 DQAVKSAPDDWLN 161 (167)
Q Consensus 149 e~Al~l~P~~~~~ 161 (167)
.......|--+.+
T Consensus 138 ~~Sf~~~~lf~~v 150 (242)
T 3kae_A 138 VRSFGKSFLFSPV 150 (242)
T ss_dssp HHHHHHCCCHHHH
T ss_pred hhhcCCccccchH
Confidence 9999998865544
No 242
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=93.71 E-value=1.7 Score=33.64 Aligned_cols=59 Identities=8% Similarity=0.022 Sum_probs=44.5
Q ss_pred hhcCCChHHHHHHHHHHH--Hh---------------CCCCHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 046296 65 SNNNHGSSSTDAYNEKMI--EA---------------NPGNALLLG-NYARFLKEVRGDFAKAEELCGRAILANPGDG 124 (167)
Q Consensus 65 y~~~g~~d~A~~~~~kAL--~l---------------~P~n~~~l~-~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~ 124 (167)
|.+..++.+|+.++++.| ++ +|.+.++.. .+|.++. +.++.++|+.+|.+...+.|-.+
T Consensus 72 y~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~llt-q~g~r~EaI~y~~~Sf~~~~lf~ 148 (242)
T 3kae_A 72 YKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCT-LSGYREEGIGHYVRSFGKSFLFS 148 (242)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHH-HhcCHHHhhhHhhhhcCCccccc
Confidence 556789999999999999 22 355555544 5666665 89999999999999877766433
No 243
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=93.44 E-value=0.23 Score=41.56 Aligned_cols=54 Identities=13% Similarity=-0.073 Sum_probs=48.1
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL 118 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~ 118 (167)
++...+++++|+..++++++.+|-+..++..+-.+|+ ..|+..+|++.|+++.+
T Consensus 180 ~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~-~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 180 AEIACGRASAVIAELEALTFEHPYREPLWTQLITAYY-LSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 4556789999999999999999999999999888887 79999999999988754
No 244
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=93.38 E-value=0.52 Score=40.04 Aligned_cols=90 Identities=12% Similarity=-0.008 Sum_probs=63.9
Q ss_pred chhhcCCChHHHHHHHHHHHHhCC--CCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCCHHH----HHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANP--GNA----LLLGNYARFLKEVRGDFAKAEELCGRAILAN---PGDGNI----LSL 129 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P--~n~----~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~---P~~~~a----l~~ 129 (167)
.+|+..+++.+|...+.+.++.-. ++. +++..-..++. ..+++.++.+++.+|.... +-+|.+ ...
T Consensus 107 ~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~-~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~ 185 (394)
T 3txn_A 107 ALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYH-ALSNLPKARAALTSARTTANAIYCPPKVQGALDLQ 185 (394)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHH
Confidence 478899999999999999887422 222 23333344454 6899999999999997654 233433 334
Q ss_pred HHHHHH-HHcCCHHHHHHHHHHHHHh
Q 046296 130 YADLIW-QAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 130 lA~~l~-~~~g~~~eA~~~~e~Al~l 154 (167)
-|.+++ . .++|.+|..+|-++++.
T Consensus 186 ~Gi~~l~~-~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 186 SGILHAAD-ERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHT-TSCHHHHHHHHHHHHHH
T ss_pred hhHHHHHh-ccCHHHHHHHHHHHHhc
Confidence 455666 6 89999999999999754
No 245
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=93.26 E-value=1.1 Score=33.96 Aligned_cols=48 Identities=8% Similarity=0.060 Sum_probs=38.4
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRA 116 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rA 116 (167)
.+..+.++++.|....++. ++...|..++.... ..++++-|+.+|.++
T Consensus 13 ~LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL-~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 13 DLALEYGNLDAALDEAKKL-----NDSITWERLIQEAL-AQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHH-HTTCHHHHHHHHHHT
T ss_pred HHHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHH-HcCChHHHHHHHHHh
Confidence 3455668888888876654 78899999998775 799999999998875
No 246
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.88 E-value=0.26 Score=41.83 Aligned_cols=90 Identities=11% Similarity=0.009 Sum_probs=64.0
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHH----HHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGN---ALLLGNYARFLKEVRGDFAKAEELCGRAILAN--PGDGNI----LSLYADL 133 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n---~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~--P~~~~a----l~~lA~~ 133 (167)
.+|.+.|++++|.++|.++....... ..++.....+.. ..+++..+..++.+|-.+- ..++.. ....|.+
T Consensus 139 ~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l-~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~ 217 (429)
T 4b4t_R 139 EYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGF-FYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIH 217 (429)
T ss_dssp HHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHG
T ss_pred HHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHH
Confidence 56778899999999999988765433 345555555554 6899999999999986552 233332 2344555
Q ss_pred HHHHcCCHHHHHHHHHHHHHh
Q 046296 134 IWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 134 l~~~~g~~~eA~~~~e~Al~l 154 (167)
++. .++|.+|-++|..++..
T Consensus 218 ~l~-~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 218 CLA-VRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp GGG-TSCHHHHHHHHHHHHHH
T ss_pred HHH-hChHHHHHHHHHHHhcc
Confidence 666 89999999999888765
No 247
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=92.39 E-value=2.8 Score=40.14 Aligned_cols=89 Identities=8% Similarity=-0.131 Sum_probs=66.9
Q ss_pred hhhcCCChHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIE-----ANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILAN-PGDGNILSLYADLIWQA 137 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~-----l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~-P~~~~al~~lA~~l~~~ 137 (167)
.|.+.++.++|...|+++.+ ..| |...|+.+-..+. ..|++++|.++|++-.+.. .-|..+|..+-..+.+
T Consensus 136 glcK~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glc-k~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~glcK- 212 (1134)
T 3spa_A 136 CCLLTDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWA-RQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMGR- 212 (1134)
T ss_dssp HHHHHTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-
T ss_pred HHHhCCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHH-hCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHh-
Confidence 46677899999999977543 244 4666776777777 7999999999999988754 2355556666667777
Q ss_pred cCC-HHHHHHHHHHHHHhC
Q 046296 138 HKD-ASRAESYFDQAVKSA 155 (167)
Q Consensus 138 ~g~-~~eA~~~~e~Al~l~ 155 (167)
.++ .++|.++|++..+..
T Consensus 213 ~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 213 QDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HTCCHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHHHcC
Confidence 776 578999999998753
No 248
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.48 E-value=2.2 Score=36.28 Aligned_cols=90 Identities=9% Similarity=0.168 Sum_probs=64.0
Q ss_pred chhhcCCChHHHHHHHHHHHHhC--CCC----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hCCCCHH----HHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEAN--PGN----ALLLGNYARFLKEVRGDFAKAEELCGRAIL---ANPGDGN----ILSL 129 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~--P~n----~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~---l~P~~~~----al~~ 129 (167)
.+|+..+++.+|...++....-- ..+ .+++..-.+++. ..+|+.+|..+++++.. ..|.++. .+..
T Consensus 145 ~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l-~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~ 223 (445)
T 4b4t_P 145 EIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSI-LKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNL 223 (445)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHH
Confidence 46778899999999998876421 112 244555555554 68999999999999742 3445543 4445
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 130 YADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 130 lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
.+.++.. .++|.+|-++|.+++..
T Consensus 224 ~~~~~~~-e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 224 LVKISLH-KREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHH-HCCHHHHHHHHHHHHHH
T ss_pred HHHHHHH-hhhHHHHHHHHHHHHhc
Confidence 6667776 89999999999999874
No 249
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=91.34 E-value=1.2 Score=33.82 Aligned_cols=55 Identities=15% Similarity=0.085 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 046296 87 GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQA 151 (167)
Q Consensus 87 ~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~A 151 (167)
.|+...+.+|. ..++++.|.+..+.. ++...|..+|..... +++++-|+.+|+++
T Consensus 6 ~D~~~rF~LAL----~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~-~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 6 QDPHIRFDLAL----EYGNLDAALDEAKKL-----NDSITWERLIQEALA-QGNASLAEMIYQTQ 60 (177)
T ss_dssp SCHHHHHHHHH----HTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHH-TTCHHHHHHHHHHT
T ss_pred CChHHHHHHHH----hcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHH-cCChHHHHHHHHHh
Confidence 56777777763 589999999998765 788999999999999 99999999999876
No 250
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=90.73 E-value=1.8 Score=34.15 Aligned_cols=50 Identities=10% Similarity=0.040 Sum_probs=35.2
Q ss_pred CChHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 69 HGSSSTDAYNEKMIEA-----NPGNA---LLLGNYARFLKEVRGDFAKAEELCGRAIL 118 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l-----~P~n~---~~l~~lA~~l~~~~gd~e~A~~~~~rAl~ 118 (167)
++.++|...|++|+++ .|.+| -...|++.|+++..++.++|..+.++|+.
T Consensus 139 g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 139 CSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp SCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3467778888877753 44444 45567777777778888888888888865
No 251
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=90.49 E-value=3.1 Score=32.19 Aligned_cols=79 Identities=9% Similarity=0.066 Sum_probs=57.8
Q ss_pred HHHHHHHHh---------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHH
Q 046296 76 AYNEKMIEA---------NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILAN--PGDGNILSLYADLIWQAHKDASRA 144 (167)
Q Consensus 76 ~~~~kAL~l---------~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~--P~~~~al~~lA~~l~~~~g~~~eA 144 (167)
..++++++. ||....+|..|+.++ .......+...|....... -..+..|..+|.++.. ++++.+|
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~--~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A 134 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF--LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLEN-AQFFLEA 134 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh--cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH-cCCHHHH
Confidence 466777764 333345566666543 1445778888888877655 5778888899999988 9999999
Q ss_pred HHHHHHHHHhCCC
Q 046296 145 ESYFDQAVKSAPD 157 (167)
Q Consensus 145 ~~~~e~Al~l~P~ 157 (167)
.++|+..|+....
T Consensus 135 ~~Vy~~GI~~~A~ 147 (202)
T 3esl_A 135 KVLLELGAENNCR 147 (202)
T ss_dssp HHHHHHHHHTTCB
T ss_pred HHHHHHHHHcCCc
Confidence 9999999997643
No 252
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.79 E-value=0.45 Score=41.98 Aligned_cols=65 Identities=18% Similarity=0.259 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 90 LLLGNYARFLKEVRGDFAKAEELCGRAILANPGD-------GNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 158 (167)
Q Consensus 90 ~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~-------~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~ 158 (167)
..++.+-+.+ ...+.+++|..+..++. .|.+ ...++.+|.++.. +.+|.+|.+++.+|++..|.+
T Consensus 232 ~l~nllLRnY-L~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~-q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 232 MLINLILRDF-LNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAI-QLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHH-HHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHHHH-HccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCcc
Confidence 3344444444 36889999999999995 4432 4566678999998 999999999999999998865
No 253
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=89.50 E-value=1 Score=35.63 Aligned_cols=47 Identities=15% Similarity=0.115 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 72 SSTDAYNEKMIE-----ANPGNALL---LGNYARFLKEVRGDFAKAEELCGRAIL 118 (167)
Q Consensus 72 d~A~~~~~kAL~-----l~P~n~~~---l~~lA~~l~~~~gd~e~A~~~~~rAl~ 118 (167)
++|...|++|++ +.|.||.- ..|++.|+++..++.++|..+.++|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456666666663 45666643 345666666666777777766666553
No 254
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.23 E-value=1.2 Score=39.05 Aligned_cols=43 Identities=19% Similarity=0.115 Sum_probs=34.9
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 046296 103 RGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQA 151 (167)
Q Consensus 103 ~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~A 151 (167)
.+++++|.++.+ ..+++..|..+|.++.+ .++++.|+++|.++
T Consensus 665 ~~~~~~A~~~~~-----~~~~~~~W~~la~~al~-~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 665 VGQLTLARDLLT-----DESAEMKWRALGDASLQ-RFNFKLAIEAFTNA 707 (814)
T ss_dssp HTCHHHHHHHHT-----TCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHH-----hhCcHhHHHHHHHHHHH-cCCHHHHHHHHHHc
Confidence 566666665532 44788999999999999 99999999999986
No 255
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=89.02 E-value=1.2 Score=35.44 Aligned_cols=47 Identities=17% Similarity=0.216 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHH
Q 046296 71 SSSTDAYNEKMIE-----ANPGNALL---LGNYARFLKEVRGDFAKAEELCGRAI 117 (167)
Q Consensus 71 ~d~A~~~~~kAL~-----l~P~n~~~---l~~lA~~l~~~~gd~e~A~~~~~rAl 117 (167)
.++|...|++|++ +.|.||.- ..|++.|+++..++.++|..+.++|+
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3566777777654 46777643 34566677767777777777666665
No 256
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=88.83 E-value=3.5 Score=30.66 Aligned_cols=81 Identities=21% Similarity=0.147 Sum_probs=58.1
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 046296 69 HGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYF 148 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~ 148 (167)
++...-+.+|-+ .+-.+..+ ++|.-..-.+++.++-.+.+...+.-+|-+|..+..+|.+|.+ .|+..+|.+++
T Consensus 75 ~NlKrVi~C~~~---~n~~se~v--d~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~K-lg~~r~a~eLl 148 (172)
T 1wy6_A 75 QNLKSVVECGVI---NNTLNEHV--NKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRR-VGDERDATTLL 148 (172)
T ss_dssp SCTHHHHHHHHH---TTCCCHHH--HHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred hcHHHHHHHHHH---hcchHHHH--HHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHH-hcchhhHHHHH
Confidence 456666666644 23333332 3333222368888888888888878888899999999999999 99999999999
Q ss_pred HHHHHhC
Q 046296 149 DQAVKSA 155 (167)
Q Consensus 149 e~Al~l~ 155 (167)
.+|.+..
T Consensus 149 ~~AC~kG 155 (172)
T 1wy6_A 149 IEACKKG 155 (172)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9998753
No 257
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=88.69 E-value=1.2 Score=35.75 Aligned_cols=48 Identities=13% Similarity=0.106 Sum_probs=32.2
Q ss_pred hHHHHHHHHHHHH----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 71 SSSTDAYNEKMIE----ANPGNALL---LGNYARFLKEVRGDFAKAEELCGRAIL 118 (167)
Q Consensus 71 ~d~A~~~~~kAL~----l~P~n~~~---l~~lA~~l~~~~gd~e~A~~~~~rAl~ 118 (167)
.++|...|++|++ +.|.||.- ..|++.|+++..++.++|..+.++|+.
T Consensus 172 ~e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 172 AEDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3467777777775 46666643 346677777677777777777777664
No 258
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=88.67 E-value=1.3 Score=35.46 Aligned_cols=48 Identities=21% Similarity=0.215 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 71 SSSTDAYNEKMIE-----ANPGNALL---LGNYARFLKEVRGDFAKAEELCGRAIL 118 (167)
Q Consensus 71 ~d~A~~~~~kAL~-----l~P~n~~~---l~~lA~~l~~~~gd~e~A~~~~~rAl~ 118 (167)
.++|...|++|++ +.|.||.- ..|++.|+++..++.++|..+.++|+.
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3567777877764 56778754 346777777778888888877766654
No 259
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=88.41 E-value=1.3 Score=35.57 Aligned_cols=48 Identities=19% Similarity=0.161 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 71 SSSTDAYNEKMIE-----ANPGNALL---LGNYARFLKEVRGDFAKAEELCGRAIL 118 (167)
Q Consensus 71 ~d~A~~~~~kAL~-----l~P~n~~~---l~~lA~~l~~~~gd~e~A~~~~~rAl~ 118 (167)
.++|...|++|++ +.|.||.- ..|++.|+++..++.++|..+.++|+.
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4567888888874 57888854 357788888788999988887777763
No 260
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=88.22 E-value=2.8 Score=37.50 Aligned_cols=80 Identities=14% Similarity=0.176 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 046296 71 SSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQ 150 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~ 150 (167)
..++...+.+++...+++. ..-.++.... ..++++.|..+|++.-...+..+...+-+|.++.. +|+.++|..+|++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~-~~e~~~r~Al-r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~-~g~~~~a~~~~~~ 344 (618)
T 1qsa_A 268 TDEQAKWRDDAIMRSQSTS-LIERRVRMAL-GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLE-RGREAEAKEILHQ 344 (618)
T ss_dssp CHHHHHHHHHHHHTCCCHH-HHHHHHHHHH-HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred ChHHHHHHHhccccCCChH-HHHHHHHHHH-HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 6677778887765444433 3444444443 57999999999987665445678888999999988 9999999999999
Q ss_pred HHH
Q 046296 151 AVK 153 (167)
Q Consensus 151 Al~ 153 (167)
+.+
T Consensus 345 ~a~ 347 (618)
T 1qsa_A 345 LMQ 347 (618)
T ss_dssp HHT
T ss_pred Hhc
Confidence 975
No 261
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=88.20 E-value=0.74 Score=30.45 Aligned_cols=18 Identities=22% Similarity=0.250 Sum_probs=13.9
Q ss_pred HHcCCHHHHHHHHHHHHH
Q 046296 101 EVRGDFAKAEELCGRAIL 118 (167)
Q Consensus 101 ~~~gd~e~A~~~~~rAl~ 118 (167)
...+++++|+.+|..||+
T Consensus 22 D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 22 DKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHH
Confidence 367888888888887775
No 262
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=87.75 E-value=0.82 Score=30.33 Aligned_cols=17 Identities=24% Similarity=0.153 Sum_probs=12.2
Q ss_pred HcCCHHHHHHHHHHHHH
Q 046296 102 VRGDFAKAEELCGRAIL 118 (167)
Q Consensus 102 ~~gd~e~A~~~~~rAl~ 118 (167)
..+++++|+.+|..||+
T Consensus 31 ~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 31 KEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHH
Confidence 67777777777777665
No 263
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=87.35 E-value=1.7 Score=34.99 Aligned_cols=47 Identities=15% Similarity=0.115 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 72 SSTDAYNEKMIE-----ANPGNALL---LGNYARFLKEVRGDFAKAEELCGRAIL 118 (167)
Q Consensus 72 d~A~~~~~kAL~-----l~P~n~~~---l~~lA~~l~~~~gd~e~A~~~~~rAl~ 118 (167)
++|...|++|++ +.|.+|.- ..|++.|+++..++.++|..+.++|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456667776654 45667643 345666676667777777766666653
No 264
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=84.65 E-value=1.6 Score=35.35 Aligned_cols=49 Identities=22% Similarity=0.330 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHH-----h--CCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 71 SSSTDAYNEKMIE-----A--NPGNALL---LGNYARFLKEVRGDFAKAEELCGRAILA 119 (167)
Q Consensus 71 ~d~A~~~~~kAL~-----l--~P~n~~~---l~~lA~~l~~~~gd~e~A~~~~~rAl~l 119 (167)
.++|...|++|++ + .|.+|.- ..|++.|+++..++.++|..+.++|+.-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4567777777764 3 5777753 3466777777778888888888887764
No 265
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=84.11 E-value=4.5 Score=31.84 Aligned_cols=52 Identities=6% Similarity=0.017 Sum_probs=41.8
Q ss_pred cCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 103 RGDFAKAEELCGRAILA-----NPGD---GNILSLYADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 103 ~gd~e~A~~~~~rAl~l-----~P~~---~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
.++.+.|...|+.|+++ .|.+ .-...+++.++++.+++.++|..+.++|+..
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 35678999999999864 3444 4666789999999889999999999999764
No 266
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=83.28 E-value=1.7 Score=29.20 Aligned_cols=35 Identities=14% Similarity=0.135 Sum_probs=27.5
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 69 HGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA 119 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l 119 (167)
.-.++|+.++++|++. ...+++++|+.+|..||+.
T Consensus 10 ~~l~~Ai~lv~~Ave~----------------D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVEL----------------DAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp CHHHHHHHHHHHHHHH----------------HHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH----------------HHhCCHHHHHHHHHHHHHH
Confidence 4577888888887543 4789999999999888764
No 267
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=83.13 E-value=1.5 Score=30.91 Aligned_cols=34 Identities=15% Similarity=0.171 Sum_probs=26.0
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA 119 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l 119 (167)
.+++|+.++.+|++ . ...+++++|+.+|..||++
T Consensus 14 ~l~kAi~lv~~Ave---------------~-D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 14 NLQKAIDLASKAAQ---------------E-DKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHHH---------------H-HHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------H-HHccCHHHHHHHHHHHHHH
Confidence 36778887777752 2 3689999999999988763
No 268
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=82.96 E-value=5.6 Score=33.58 Aligned_cols=92 Identities=10% Similarity=-0.057 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHhCCCC-HHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CC----HHHHHHHHHHHHHHc
Q 046296 71 SSSTDAYNEKMIEANPGN-ALL-----LGNYARFLKEVRGDFAKAEELCGRAILANP--GD----GNILSLYADLIWQAH 138 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n-~~~-----l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P--~~----~~al~~lA~~l~~~~ 138 (167)
.+.-+..+.++++..-+. ..+ -..++.+++ ..++|.+|.+++.+.++--. ++ .+++..-..++.. .
T Consensus 75 ~~~~~~~~~~~~~~a~~~~r~flr~~l~~kL~~l~~-~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~-~ 152 (394)
T 3txn_A 75 TGIEVQLCKDCIEWAKQEKRTFLRQSLEARLIALYF-DTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHA-L 152 (394)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHH-T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH-h
Confidence 344455555555543332 222 226788776 79999999999998887421 22 2344445556777 9
Q ss_pred CCHHHHHHHHHHHHHhC---CCCHHHHHh
Q 046296 139 KDASRAESYFDQAVKSA---PDDWLNLIK 164 (167)
Q Consensus 139 g~~~eA~~~~e~Al~l~---P~~~~~l~~ 164 (167)
+++.++..+|.+|.+.. |.+|.+.+.
T Consensus 153 ~n~~k~k~~l~~a~~~~~ai~~~p~i~a~ 181 (394)
T 3txn_A 153 SNLPKARAALTSARTTANAIYCPPKVQGA 181 (394)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred ccHHHHHHHHHHHHhhhccCCCCHHHHHH
Confidence 99999999999997763 345655443
No 269
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=82.50 E-value=1.9 Score=40.90 Aligned_cols=85 Identities=7% Similarity=-0.152 Sum_probs=57.8
Q ss_pred chhhcCCChHHHHHHHHHHHH---h-----------------CC---CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 63 NYSNNNHGSSSTDAYNEKMIE---A-----------------NP---GNALLLGNYARFLKEVRGDFAKAEELCGRAILA 119 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~---l-----------------~P---~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l 119 (167)
.+|...+++++|..+|++|-. . .+ .-+.++.....+ ++..+.++.++++.+.||+.
T Consensus 850 ~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~L-Fe~~~~~~~vi~fa~lAi~~ 928 (1139)
T 4fhn_B 850 LIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKK-LFEESAYIDALEFSLLADAS 928 (1139)
T ss_dssp HHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHH-HHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHh
Confidence 466778999999999988731 1 11 112344444444 45789999999999999988
Q ss_pred CC-CCHH----HHHHHHHHHHHHcCCHHHHHHHHH
Q 046296 120 NP-GDGN----ILSLYADLIWQAHKDASRAESYFD 149 (167)
Q Consensus 120 ~P-~~~~----al~~lA~~l~~~~g~~~eA~~~~e 149 (167)
.+ ++.. .|.++-..+.. .++|++|-..+.
T Consensus 929 ~~~~~~~~~~~l~~~iFk~~L~-l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 929 KETDDEDLSIAITHETLKTACA-AGKFDAAHVALM 962 (1139)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHH-HCCSGGGGHHHH
T ss_pred ccCCChhhHHHHHHHHHHHHHh-hCCHHHHHHHHH
Confidence 75 4432 44555556677 899999866553
No 270
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=82.08 E-value=6.4 Score=37.34 Aligned_cols=78 Identities=13% Similarity=-0.054 Sum_probs=55.5
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---h-----------------CC---CCHHHHHHHHHHHHH
Q 046296 80 KMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL---A-----------------NP---GDGNILSLYADLIWQ 136 (167)
Q Consensus 80 kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~---l-----------------~P---~~~~al~~lA~~l~~ 136 (167)
+.+..-|.++..-+-+|+++. ..+++++|..+|++|-. . .+ .-+..+.....++.+
T Consensus 833 ~l~~~~~~~~~~~yl~g~~~L-~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~ 911 (1139)
T 4fhn_B 833 QLIGWLNSDPIAVYLKALIYL-KSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFE 911 (1139)
T ss_dssp HHHHHSCCCHHHHHHHHHHHH-HTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHH
T ss_pred HHhhhccCCcHHHHHHHHHHH-hcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHH
Confidence 344567888888888999886 89999999999998731 1 11 122334444444444
Q ss_pred HcCCHHHHHHHHHHHHHhCC-CCH
Q 046296 137 AHKDASRAESYFDQAVKSAP-DDW 159 (167)
Q Consensus 137 ~~g~~~eA~~~~e~Al~l~P-~~~ 159 (167)
.+.++.+++..+.||+..+ +++
T Consensus 912 -~~~~~~vi~fa~lAi~~~~~~~~ 934 (1139)
T 4fhn_B 912 -ESAYIDALEFSLLADASKETDDE 934 (1139)
T ss_dssp -TSCCHHHHHHHHHHHHHCCSCCH
T ss_pred -cCCHHHHHHHHHHHHHhccCCCh
Confidence 8999999999999999865 444
No 271
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=81.49 E-value=8.1 Score=28.77 Aligned_cols=49 Identities=6% Similarity=0.108 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 109 AEELCGRAILAN--PGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDD 158 (167)
Q Consensus 109 A~~~~~rAl~l~--P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~ 158 (167)
+...|....... -..+..|..+|.++-. .+++.+|.++|+.+|+....-
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~lE~-~~~~~~A~~Iy~~Gi~~~A~P 129 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEEYEA-RENFRKADAIFQEGIQQKAEP 129 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTTCBS
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCCc
Confidence 556666666544 5778888899999988 999999999999999986543
No 272
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=81.26 E-value=4.9 Score=31.70 Aligned_cols=48 Identities=13% Similarity=0.000 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHH-----hCCCCHHHH---HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 106 FAKAEELCGRAIL-----ANPGDGNIL---SLYADLIWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 106 ~e~A~~~~~rAl~-----l~P~~~~al---~~lA~~l~~~~g~~~eA~~~~e~Al~ 153 (167)
.++|...|++|++ +.|.+|.-+ .+++.++++..++.++|..+.++|+.
T Consensus 146 ~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3678888888875 468887543 47788888878999998887777765
No 273
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=81.02 E-value=7 Score=28.76 Aligned_cols=52 Identities=4% Similarity=0.034 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 046296 108 KAEELCGRAILAN--PGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDWL 160 (167)
Q Consensus 108 ~A~~~~~rAl~l~--P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~ 160 (167)
.+...|....... -..+..+..+|.++.. .+++.+|.++|+..|+....-..
T Consensus 83 dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A~~Vy~~Gi~~~A~P~~ 136 (152)
T 4a1g_A 83 DLHQFFEFLYNHGIGTLSSPLYIAWAGHLEA-QGELQHASAVLQRGIQNQAEPRE 136 (152)
T ss_dssp CHHHHHHHHHTTTTTTTBHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTTCBSHH
T ss_pred CHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCccHH
Confidence 3667777666543 5778888899999988 99999999999999998654443
No 274
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=80.85 E-value=2.5 Score=27.69 Aligned_cols=34 Identities=12% Similarity=0.018 Sum_probs=25.4
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA 119 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l 119 (167)
-.++|+.+..+|++ . ...+++++|+.+|..|++.
T Consensus 9 ~l~~A~~l~~~Av~---------------~-D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 9 FLTKGIELVQKAID---------------L-DTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHH---------------H-HHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------H-HHcCCHHHHHHHHHHHHHH
Confidence 46677777777752 2 3789999999999988863
No 275
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=80.53 E-value=2 Score=36.27 Aligned_cols=64 Identities=16% Similarity=0.124 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 89 ALLLGNYARFLKEVRGDFAKAEELCGRAILANP---GDGNILSLYADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 89 ~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P---~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
..++..+|.++. ..|++++|.++|.++..... .-.+.+.....+.+. .+++..+..++.+|..+
T Consensus 131 ~~~~~~la~~~~-~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~-~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 131 AQAWINLGEYYA-QIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFF-YNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp SSCCHHHHHHHH-HHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 456788999887 89999999999999987643 234666666677777 89999999999999665
No 276
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=80.42 E-value=5.3 Score=31.57 Aligned_cols=48 Identities=13% Similarity=0.088 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHH-----hCCCCHHHH---HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 106 FAKAEELCGRAIL-----ANPGDGNIL---SLYADLIWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 106 ~e~A~~~~~rAl~-----l~P~~~~al---~~lA~~l~~~~g~~~eA~~~~e~Al~ 153 (167)
.++|...|++|++ +.|.+|.-+ .+++.+|++.+++.++|..+.++|+.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4678888888875 568887544 46788888878999998887766654
No 277
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=80.02 E-value=5.5 Score=31.93 Aligned_cols=48 Identities=10% Similarity=0.043 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHH----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 106 FAKAEELCGRAIL----ANPGDGNI---LSLYADLIWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 106 ~e~A~~~~~rAl~----l~P~~~~a---l~~lA~~l~~~~g~~~eA~~~~e~Al~ 153 (167)
.++|...|++|++ +.|.+|.- ..+++.+|++.+++.++|..+.++|+.
T Consensus 172 ~e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 172 AEDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3678889999886 46777744 347888888878999999888888775
No 278
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=79.95 E-value=3.4 Score=27.42 Aligned_cols=19 Identities=11% Similarity=0.064 Sum_probs=15.3
Q ss_pred HHcCCHHHHHHHHHHHHHh
Q 046296 101 EVRGDFAKAEELCGRAILA 119 (167)
Q Consensus 101 ~~~gd~e~A~~~~~rAl~l 119 (167)
...+++++|+.+|..||+.
T Consensus 27 D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 27 DSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHH
Confidence 3688999999888888753
No 279
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=79.78 E-value=5.8 Score=31.60 Aligned_cols=48 Identities=15% Similarity=0.127 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHH-----hCCCCHHHH---HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 106 FAKAEELCGRAIL-----ANPGDGNIL---SLYADLIWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 106 ~e~A~~~~~rAl~-----l~P~~~~al---~~lA~~l~~~~g~~~eA~~~~e~Al~ 153 (167)
.+.|...|++|+. +.|.+|.-+ .+++.+|++.+++.++|..+.++|+.
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4678888888865 567887543 46788888878999998887766654
No 280
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=79.74 E-value=5.7 Score=31.84 Aligned_cols=48 Identities=15% Similarity=0.036 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHH-----hCCCCHHHH---HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 106 FAKAEELCGRAIL-----ANPGDGNIL---SLYADLIWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 106 ~e~A~~~~~rAl~-----l~P~~~~al---~~lA~~l~~~~g~~~eA~~~~e~Al~ 153 (167)
.++|...|++|+. +.|.+|.-+ .+++.+|++.+++.++|..+.++|+.
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3678888998875 468887543 47788888878999998887777764
No 281
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=79.19 E-value=12 Score=29.18 Aligned_cols=50 Identities=10% Similarity=0.088 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 046296 107 AKAEELCGRAILAN--PGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPD 157 (167)
Q Consensus 107 e~A~~~~~rAl~l~--P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~ 157 (167)
+.+..+|....... -..+..|..+|.++.. .+++.+|..+|+..|+..-.
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFES-RGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTCB
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCc
Confidence 45666777666544 5778888899999988 99999999999999997654
No 282
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=78.23 E-value=6.2 Score=26.39 Aligned_cols=13 Identities=23% Similarity=0.158 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHh
Q 046296 107 AKAEELCGRAILA 119 (167)
Q Consensus 107 e~A~~~~~rAl~l 119 (167)
++|+.++.+|++.
T Consensus 13 ~~Ai~lv~~Ave~ 25 (93)
T 1wfd_A 13 TAAVAVLKRAVEL 25 (93)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444444
No 283
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=76.76 E-value=5.7 Score=26.02 Aligned_cols=45 Identities=16% Similarity=0.195 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 046296 71 SSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDG 124 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~ 124 (167)
.++|+.+.++|++.|-.- ++...+. -|.+|+++|.++++..|+..
T Consensus 8 ~~~Ai~lv~~Ave~D~~g-----~y~eAl~----lY~~aie~l~~~lk~e~d~~ 52 (83)
T 2v6y_A 8 EDMARKYAILAVKADKEG-----KVEDAIT----YYKKAIEVLSQIIVLYPESV 52 (83)
T ss_dssp HHHHHHHHHHHHHHHHTT-----CHHHHHH----HHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHHHHhc-----cHHHHHH----HHHHHHHHHHHHHHHCCCHH
Confidence 468888888888875321 1111111 24688888888888876554
No 284
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=76.48 E-value=8.5 Score=28.59 Aligned_cols=53 Identities=19% Similarity=0.103 Sum_probs=42.6
Q ss_pred hcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 66 NNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA 119 (167)
Q Consensus 66 ~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l 119 (167)
..++..++-...+...+.-+|-+|+++..+|.+|. ..++..+|.+++.+|-+.
T Consensus 102 v~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~-Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 102 VIQGKRDKLEEIGREILKNNEVSASILVAIANALR-RVGDERDATTLLIEACKK 154 (172)
T ss_dssp HHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHT
T ss_pred HHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHH-HhcchhhHHHHHHHHHHh
Confidence 34567777777777777777778999999999997 899999999999999764
No 285
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=75.89 E-value=2.2 Score=37.58 Aligned_cols=57 Identities=21% Similarity=0.184 Sum_probs=44.9
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGN-------ALLLGNYARFLKEVRGDFAKAEELCGRAILANPGD 123 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n-------~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~ 123 (167)
.|...+.+++|..+..++. .|.+ ..+++.+|++.. .+.+|.+|.+++..|++..|.+
T Consensus 240 nYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a-~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 240 DFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINA-IQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCcc
Confidence 3666788999999999884 5543 345566788776 7999999999999999988765
No 286
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=75.60 E-value=6.4 Score=25.87 Aligned_cols=46 Identities=13% Similarity=0.165 Sum_probs=27.0
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDG 124 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~ 124 (167)
-.++|+.+.++|++.|-.. ++...+. -|.+|+++|.++++..|+..
T Consensus 15 ~~~~Ai~lv~~Ave~D~~g-----~y~eAl~----lY~~aie~l~~alk~e~d~~ 60 (83)
T 2w2u_A 15 LEEMARKYAINAVKADKEG-----NAEEAIT----NYKKAIEVLAQLVSLYRDGS 60 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTT-----CHHHHHH----HHHHHHHHHHHHHHHSTTSS
T ss_pred HHHHHHHHHHHHHHHHHhc-----cHHHHHH----HHHHHHHHHHHHHHHCCCHH
Confidence 3567888888887764321 1111111 14577788888887766543
No 287
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=74.66 E-value=8.4 Score=24.87 Aligned_cols=24 Identities=21% Similarity=0.255 Sum_probs=11.7
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHH
Q 046296 102 VRGDFAKAEELCGRAILANPGDGN 125 (167)
Q Consensus 102 ~~gd~e~A~~~~~rAl~l~P~~~~ 125 (167)
..+++++|..+|-+||..-|+-..
T Consensus 29 ~~g~~~~~~~hf~nAl~Vc~qP~~ 52 (73)
T 3ax2_A 29 AQGDYEKGVDHLTNAIAVCGQPQQ 52 (73)
T ss_dssp HTTCHHHHHHHHHHHHHTCSSCHH
T ss_pred HCCCHHHHHHHHHHHHHHcCCHHH
Confidence 344455555555555555444443
No 288
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=73.65 E-value=1.3 Score=29.66 Aligned_cols=48 Identities=15% Similarity=0.250 Sum_probs=21.6
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 046296 86 PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADL 133 (167)
Q Consensus 86 P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~ 133 (167)
|+++..+...+..+....++..+++.-..++|+.+|+||..+..|=..
T Consensus 6 ~~~~~sLd~v~~~f~~ga~~~~~~v~~Ai~~L~~~PsnPa~LAeyQ~k 53 (85)
T 2ca5_A 6 PNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSK 53 (85)
T ss_dssp --------------CCHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 333333444444333233445666666677777888888777655433
No 289
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=72.73 E-value=22 Score=33.11 Aligned_cols=80 Identities=13% Similarity=-0.110 Sum_probs=55.4
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-h--------------------CCCCH--HHHHHHHHHHH
Q 046296 79 EKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAIL-A--------------------NPGDG--NILSLYADLIW 135 (167)
Q Consensus 79 ~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~-l--------------------~P~~~--~al~~lA~~l~ 135 (167)
++.+..-|.++..-+-+|+++. ..+++++|..+|++|-. + .++.. ..|.+.. -+|
T Consensus 830 ~eL~~~~~~t~~~~yv~gr~~L-~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~-~LF 907 (950)
T 4gq2_M 830 MQLIGWLNSDPIAVYLKALIYL-KSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLS-KKL 907 (950)
T ss_dssp HHHGGGCCSSHHHHHHHHHHHH-HTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHH-HHH
T ss_pred HHHHhhcCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHH-HHH
Confidence 4455667888888888898886 79999999999998641 1 11111 2333333 344
Q ss_pred HHcCCHHHHHHHHHHHHHh-CCCCHH
Q 046296 136 QAHKDASRAESYFDQAVKS-APDDWL 160 (167)
Q Consensus 136 ~~~g~~~eA~~~~e~Al~l-~P~~~~ 160 (167)
+..+-++-+++..+.||+. .++++.
T Consensus 908 E~~~a~~~vi~fA~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 908 FEESAYIDALEFSLLADASKETDDED 933 (950)
T ss_dssp HHTTCHHHHHHHHHHHHHTCCSCCHH
T ss_pred HhcCCHHHHHHHHHHHHhhcccCCcc
Confidence 4489999999999999975 455554
No 290
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=71.78 E-value=6.9 Score=31.53 Aligned_cols=49 Identities=20% Similarity=0.260 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHH-----h--CCCCHHHH---HHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 106 FAKAEELCGRAIL-----A--NPGDGNIL---SLYADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 106 ~e~A~~~~~rAl~-----l--~P~~~~al---~~lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
.++|...|++|++ + .|.+|.-+ .+++.+|++.+++.++|.++.++|+.-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4678888888865 3 57887543 467888888789999999999998875
No 291
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=71.77 E-value=15 Score=31.29 Aligned_cols=46 Identities=20% Similarity=0.086 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 108 KAEELCGRAILA-----NPGDGNILSLYADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 108 ~A~~~~~rAl~l-----~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
.++.+|.+||.. +..+...+..+|..+++ .+++.+|+.++-.|-..
T Consensus 275 ~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR-~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 275 PAEELFKEAITVAKREYSDHHIYPYTYLGGYYYR-KKKYYEAIASWVDAGYV 325 (472)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCccchhhhhhhhhh-cchHHHHHHHHHHHHHH
Confidence 378899999876 34667788889999999 99999999998877543
No 292
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=71.04 E-value=6.1 Score=31.73 Aligned_cols=48 Identities=13% Similarity=0.000 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHH-----hCCCCHHHH---HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 106 FAKAEELCGRAIL-----ANPGDGNIL---SLYADLIWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 106 ~e~A~~~~~rAl~-----l~P~~~~al---~~lA~~l~~~~g~~~eA~~~~e~Al~ 153 (167)
.++|...|++|++ +.|.+|.-+ .+++.++++.+++.++|..+.++|+.
T Consensus 172 ~e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4677888888875 467887543 46788888878999998877776654
No 293
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=70.11 E-value=25 Score=24.49 Aligned_cols=13 Identities=8% Similarity=-0.049 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHhC
Q 046296 108 KAEELCGRAILAN 120 (167)
Q Consensus 108 ~A~~~~~rAl~l~ 120 (167)
+|+++|.++++..
T Consensus 43 ~Aie~l~~alk~e 55 (117)
T 2cpt_A 43 HAVQYFLHVVKYE 55 (117)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhc
Confidence 3333444444443
No 294
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=68.35 E-value=47 Score=27.90 Aligned_cols=71 Identities=13% Similarity=0.078 Sum_probs=49.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCC----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hCCCCHHHHH
Q 046296 93 GNYARFLKEVRGDFAKAEELCGRAILAN--PGD----GNILSLYADLIWQAHKDASRAESYFDQAVK---SAPDDWLNLI 163 (167)
Q Consensus 93 ~~lA~~l~~~~gd~e~A~~~~~rAl~l~--P~~----~~al~~lA~~l~~~~g~~~eA~~~~e~Al~---l~P~~~~~l~ 163 (167)
..|+.++. ..+++.+|...+.....-- ..+ .+++..-..+++. .+++.+|..++.++.. ..|..+....
T Consensus 141 ~~La~i~e-~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~-~~d~~~a~~~~~ki~~~~~~~~~~~~lk~ 218 (445)
T 4b4t_P 141 KDLVEIKK-EEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSIL-KGDYSQATVLSRKILKKTFKNPKYESLKL 218 (445)
T ss_dssp HHHHHHHH-HHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHSSCCHHHHH
T ss_pred HHHHHHHH-HccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhhcccCCcHHHHH
Confidence 45677765 7899999999988875321 112 3555566677788 8999999999999742 3555665554
Q ss_pred hc
Q 046296 164 KL 165 (167)
Q Consensus 164 ~y 165 (167)
.|
T Consensus 219 ~~ 220 (445)
T 4b4t_P 219 EY 220 (445)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 295
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=67.45 E-value=6.5 Score=26.19 Aligned_cols=27 Identities=22% Similarity=0.304 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 046296 71 SSSTDAYNEKMIEANPGNALLLGNYAR 97 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n~~~l~~lA~ 97 (167)
..+++..-.++|+.+|+||.++..|=.
T Consensus 26 ~~~~v~~Ai~~L~~~PsnPa~LAeyQ~ 52 (85)
T 2ca5_A 26 LQGELTLALDKLAKNPSNPQLLAEYQS 52 (85)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 445566666777788888887665443
No 296
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=67.13 E-value=21 Score=30.87 Aligned_cols=64 Identities=13% Similarity=0.114 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 88 NALLLGNYARFLKEVRG--DFAKAEELCGRAILA-----NPGDGNILSLYADLIWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 88 n~~~l~~lA~~l~~~~g--d~e~A~~~~~rAl~l-----~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~ 153 (167)
.|.++.+||.+-. ..- ....++.+|++||.. +..+...+..+|-.+++ .++|.+|++++-.|-.
T Consensus 261 YPmALgnLgDLEe-i~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R-~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 261 YPMALGNLADLEE-LEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTAT 331 (489)
T ss_dssp CHHHHHHHHHHHH-HSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred cchhhhcccCHhh-cCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHH-hhhHHHHHHHhhhhhh
Confidence 4667777776432 221 234578899999885 34566777788999999 9999999999988754
No 297
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=67.03 E-value=9.9 Score=28.88 Aligned_cols=38 Identities=18% Similarity=0.004 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 89 ALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNIL 127 (167)
Q Consensus 89 ~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al 127 (167)
..+++.+|.+.. ...++.+|.+++..|++.-|.+....
T Consensus 14 v~Y~YYlGr~~~-~~~~y~~A~~~L~~A~~~~~~~~~~~ 51 (203)
T 3t5x_A 14 VTYKYYVGRKAM-FDSDFKQAEEYLSFAFEHCHRSSQKN 51 (203)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHH-HHhCHHHHHHHHHHHHHHCCHhHHHH
Confidence 356667788765 78999999999999999988876443
No 298
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=66.42 E-value=12 Score=24.70 Aligned_cols=46 Identities=9% Similarity=0.091 Sum_probs=29.6
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDG 124 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~ 124 (167)
+..+|+.+..+|++.+-..- +.-|..+ |.+|+++|..++...|+..
T Consensus 12 ~~~~A~~lv~~Ave~D~~g~---y~eAl~l------Y~~Aie~ll~alk~e~d~~ 57 (86)
T 4a5x_A 12 QSTAAATVLKRAVELDSESR---YPQALVC------YQEGIDLLLQVLKGTKDNT 57 (86)
T ss_dssp HHHHHHHHHHHHHHHHHTTC---HHHHHHH------HHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHHHHHcCC---HHHHHHH------HHHHHHHHHHHHhhCCCHH
Confidence 34578888899888743211 1112222 5688899999998877653
No 299
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=65.83 E-value=31 Score=28.49 Aligned_cols=32 Identities=16% Similarity=-0.033 Sum_probs=24.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 046296 129 LYADLIWQAHKDASRAESYFDQAVKSAPDDWL 160 (167)
Q Consensus 129 ~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~ 160 (167)
..|+-+..+.++|.-|....++.|++.|+.+.
T Consensus 211 r~AM~~a~K~KNy~tAa~fArrLLel~p~~~~ 242 (325)
T 3mv2_A 211 QVAMSQHFKHKNFLQASYFAGEFLKIISSGPR 242 (325)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHH
Confidence 34443333489999999999999999997553
No 300
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=65.44 E-value=26 Score=30.13 Aligned_cols=88 Identities=8% Similarity=-0.057 Sum_probs=59.6
Q ss_pred CChHHHHHHHHHHHHhCCC--CH----------H----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----------C
Q 046296 69 HGSSSTDAYNEKMIEANPG--NA----------L----LLGNYARFLKEVRGDFAKAEELCGRAILANP----------G 122 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~--n~----------~----~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P----------~ 122 (167)
...++|...+.++...--+ ++ . ..+++-.+++ +.++..-+...++..-...+ .
T Consensus 140 ~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYF-kl~~~~lckni~k~i~~~~~~p~~~~~p~~q 218 (455)
T 3t5v_B 140 QFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYF-RIESPQLCSNIFKNFQPKSMLAHFNEYQLDQ 218 (455)
T ss_dssp HHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHH-HSSCCTTHHHHHHTHHHHCCCSCGGGSCHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHH-HcCCHHHHHHHHHHhccCCCCcChhhCCccc
Confidence 4678888889998887222 11 1 1223334454 67887777777654332222 2
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCC
Q 046296 123 DGNILSLYADLIWQAHKDASRAESYFDQAVKS-APDD 158 (167)
Q Consensus 123 ~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l-~P~~ 158 (167)
-...++.+|.+++. +.+|.+|.+.+.+|++. .|.+
T Consensus 219 ~v~Y~YYlGr~~~~-~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 219 QIEYRYLLGRYYLL-NSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHCC
T ss_pred eEeeeHHHHHHHHH-HccHHHHHHHHHHHHHhcCCcc
Confidence 24677788999988 99999999999999998 7755
No 301
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=65.43 E-value=48 Score=27.21 Aligned_cols=94 Identities=11% Similarity=0.016 Sum_probs=52.6
Q ss_pred hcCCChHHHHHHHHHHHHhCCC----CH----HH--------HHHHHHHHHHHcCCH-----HHHHHHHHHHH-----Hh
Q 046296 66 NNNHGSSSTDAYNEKMIEANPG----NA----LL--------LGNYARFLKEVRGDF-----AKAEELCGRAI-----LA 119 (167)
Q Consensus 66 ~~~g~~d~A~~~~~kAL~l~P~----n~----~~--------l~~lA~~l~~~~gd~-----e~A~~~~~rAl-----~l 119 (167)
++.+++++|+..|+.+|..-|- +. ++ .+-+|.-+...+.+. +.....++-|. .+
T Consensus 113 ~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELAAYFT~c~L 192 (320)
T 3mkr_B 113 TTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMAAYFTHSNL 192 (320)
T ss_dssp HHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHHHHHTTSCC
T ss_pred HhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHHHHhccCCC
Confidence 6779999999999999988652 21 11 111222222122221 22222222221 12
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 046296 120 NPGDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDW 159 (167)
Q Consensus 120 ~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~ 159 (167)
.|.+...-...|+-+..+.++|.-|..+-++.|++.|+..
T Consensus 193 qp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 232 (320)
T 3mkr_B 193 QPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPE 232 (320)
T ss_dssp CHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHH
T ss_pred cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 3333333334444333348999999999999999988633
No 302
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=65.20 E-value=35 Score=32.79 Aligned_cols=66 Identities=8% Similarity=-0.135 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCH
Q 046296 92 LGNYARFLKEVRGDFAKAEELCGRAILA----NPGDGNILSLYADLIWQAHKDASRAESYFDQAVKS--APDDW 159 (167)
Q Consensus 92 l~~lA~~l~~~~gd~e~A~~~~~rAl~l----~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l--~P~~~ 159 (167)
++.+-..+. ..|++++|..+|.+..+. -.-|..+|..+-..+.+ .|+.++|+++|++..+. .|+..
T Consensus 130 ynaLIdglc-K~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck-~G~~~eA~~Lf~eM~~~G~~PDvv 201 (1134)
T 3spa_A 130 LLAFFKCCL-LTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWAR-QGAFKELVYVLFMVKDAGLTPDLL 201 (1134)
T ss_dssp HHHHHHHHH-HHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHTTCCCCHH
T ss_pred HHHHHHHHH-hCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHh-CCCHHHHHHHHHHHHHcCCCCcHH
Confidence 455555666 789999999999764432 23456677778788888 99999999999999774 56543
No 303
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=64.30 E-value=25 Score=30.52 Aligned_cols=45 Identities=9% Similarity=0.048 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 108 KAEELCGRAILA-----NPGDGNILSLYADLIWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 108 ~A~~~~~rAl~l-----~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~ 153 (167)
.++.+|.+||.. +..+...+..+|-.+++ .+++.+|+.++-.|-.
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR-~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTAT 346 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCccceeecchhhhh-cchHHHHHHHHHHHHH
Confidence 477889998876 34667788889999999 9999999999887754
No 304
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.80 E-value=9.4 Score=26.92 Aligned_cols=17 Identities=18% Similarity=0.116 Sum_probs=10.8
Q ss_pred HcCCHHHHHHHHHHHHH
Q 046296 102 VRGDFAKAEELCGRAIL 118 (167)
Q Consensus 102 ~~gd~e~A~~~~~rAl~ 118 (167)
..++.+.|+.+|++.|.
T Consensus 34 E~g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 34 ELGQKEEAKNYYKQGIG 50 (116)
T ss_dssp HHTCHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHH
Confidence 35667777666666654
No 305
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=63.37 E-value=22 Score=26.93 Aligned_cols=73 Identities=10% Similarity=-0.026 Sum_probs=43.5
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCCCCHHHHHH----HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANPGNALLLGN----YARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQA 137 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~----lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~ 137 (167)
|.+++.+.++.+|..+|.+|++..|........ +-.......|++.. ...+++ .+. ..+..+..++.
T Consensus 21 Gr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~-~~ll~~----~~~--~~y~~L~~Avr-- 91 (203)
T 3t5x_A 21 GRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT-VELLKK----YHL--MQFAEVTRAVS-- 91 (203)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC-HHHHHH----TTC--GGGHHHHHHHH--
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC-HHHhhh----Cch--hHHHHHHHHHH--
Confidence 356788899999999999999999876432221 11122235677543 333332 122 23556666554
Q ss_pred cCCHHH
Q 046296 138 HKDASR 143 (167)
Q Consensus 138 ~g~~~e 143 (167)
.|+...
T Consensus 92 ~Gdl~~ 97 (203)
T 3t5x_A 92 EGNLLL 97 (203)
T ss_dssp HTCHHH
T ss_pred hCCHHH
Confidence 487654
No 306
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=63.23 E-value=17 Score=23.54 Aligned_cols=13 Identities=38% Similarity=0.312 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHh
Q 046296 107 AKAEELCGRAILA 119 (167)
Q Consensus 107 e~A~~~~~rAl~l 119 (167)
++|+.++.+|++.
T Consensus 11 ~~A~~l~~~Av~~ 23 (85)
T 2v6x_A 11 TKGIELVQKAIDL 23 (85)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4555555555554
No 307
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=61.50 E-value=16 Score=24.86 Aligned_cols=23 Identities=22% Similarity=0.187 Sum_probs=12.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHH
Q 046296 94 NYARFLKEVRGDFAKAEELCGRAI 117 (167)
Q Consensus 94 ~lA~~l~~~~gd~e~A~~~~~rAl 117 (167)
..|..+. ..++|++|+++.++|.
T Consensus 20 RrAe~ll-~~gkydeAIech~kAa 42 (97)
T 2crb_A 20 RRADRLL-AAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred hHHHHHH-hcCCHHHHHHHHHHHH
Confidence 3344333 4566666666665554
No 308
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=61.30 E-value=19 Score=32.11 Aligned_cols=44 Identities=27% Similarity=0.299 Sum_probs=36.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 046296 95 YARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKD 140 (167)
Q Consensus 95 lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~ 140 (167)
.|...+ ..|+|.-|.+++..++..+|+|..+...+|.+|.+ ++.
T Consensus 455 ~a~~~~-~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~-l~~ 498 (658)
T 2cfu_A 455 QARASY-ARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQ-LGY 498 (658)
T ss_dssp HHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHH
T ss_pred HHHHHH-HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-HHH
Confidence 344444 57899999999999999999999999999998877 553
No 309
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=60.30 E-value=29 Score=22.25 Aligned_cols=35 Identities=9% Similarity=0.023 Sum_probs=27.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHh
Q 046296 129 LYADLIWQAHKDASRAESYFDQAVKSAPDDWLNLIK 164 (167)
Q Consensus 129 ~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~~~l~~ 164 (167)
.+|..+.. .|++++|..+|-+||+.-|+-...+..
T Consensus 22 ~~GE~L~~-~g~~~~~~~hf~nAl~Vc~qP~~LL~i 56 (73)
T 3ax2_A 22 QLGEELLA-QGDYEKGVDHLTNAIAVCGQPQQLLQV 56 (73)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHTCSSCHHHHHH
T ss_pred HHHHHHHH-CCCHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 56788887 888888998888999888876655543
No 310
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=58.74 E-value=49 Score=26.87 Aligned_cols=27 Identities=22% Similarity=0.268 Sum_probs=24.2
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 046296 122 GDGNILSLYADLIWQAHKDASRAESYFD 149 (167)
Q Consensus 122 ~~~~al~~lA~~l~~~~g~~~eA~~~~e 149 (167)
.+|..+..+|..+++ .+++.+|+.+|-
T Consensus 132 Gdp~LH~~~a~~~~~-e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLE-GDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhh-cCCHHHHHHHHH
Confidence 488999999999999 999999999884
No 311
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=58.39 E-value=12 Score=25.39 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=24.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 93 GNYARFLKEVRGDFAKAEELCGRAILANPGDGNIL 127 (167)
Q Consensus 93 ~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al 127 (167)
..++..|. ..++++.|+.+|-+||..-|+-...+
T Consensus 24 V~lGE~L~-~~g~~e~av~Hf~nAl~Vc~qP~~LL 57 (95)
T 1om2_A 24 IQLGEELL-AQGDYEKGVDHLTNAIAVCGQPQQLL 57 (95)
T ss_dssp HHHHHHHH-HHTCHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHH-HCCCHHHHHHHHHHHHHHcCCHHHHH
Confidence 44566665 67888888888888888877765544
No 312
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=58.17 E-value=37 Score=28.93 Aligned_cols=48 Identities=15% Similarity=0.186 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhCCC-----------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 046296 107 AKAEELCGRAILANPG-----------DGNILSLYADLIWQAHKDASRAESYFDQAVKSA 155 (167)
Q Consensus 107 e~A~~~~~rAl~l~P~-----------~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~ 155 (167)
+..++-++.|+..-|. ...++..+|.+++. ++++++|+++.+++|...
T Consensus 175 ~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~-~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 175 AQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLY-ARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHhcC
Confidence 3444556677766543 24678889999998 999999999999999764
No 313
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=58.14 E-value=53 Score=24.18 Aligned_cols=56 Identities=13% Similarity=0.105 Sum_probs=39.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHH-HHH--HHHHHcCCHHHHHHHHHHHHH
Q 046296 96 ARFLKEVRGDFAKAEELCGRAILANPGD------GNILSL-YAD--LIWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 96 A~~l~~~~gd~e~A~~~~~rAl~l~P~~------~~al~~-lA~--~l~~~~g~~~eA~~~~e~Al~ 153 (167)
+..++ ..++|=+|-+.++.+-...|.. ...+.. +|. ..+. .++..-|..++.+|+.
T Consensus 39 ~i~lF-n~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~-rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 39 GVRLY-NSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFD-FEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHH-HTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHH
T ss_pred HHHHH-hCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 34454 5799999999999998877655 223333 333 3455 7999999999999987
No 314
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=57.95 E-value=11 Score=25.43 Aligned_cols=23 Identities=13% Similarity=0.105 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHhCCCCHHHHHhc
Q 046296 143 RAESYFDQAVKSAPDDWLNLIKL 165 (167)
Q Consensus 143 eA~~~~e~Al~l~P~~~~~l~~y 165 (167)
++++-..++++.+|+||.+|++|
T Consensus 34 ~~l~~Al~~L~~~psNPa~LAe~ 56 (92)
T 2g0u_A 34 KQLQDAQANLTKNPSDPTALANY 56 (92)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCHHHHHHH
Confidence 33444444445566666666554
No 315
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=57.03 E-value=19 Score=30.89 Aligned_cols=61 Identities=8% Similarity=-0.117 Sum_probs=45.7
Q ss_pred cchhhcCCChHHHHHHHHHHHHhCC--------C--CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCC
Q 046296 62 NNYSNNNHGSSSTDAYNEKMIEANP--------G--NALLLGNYARFLKEVRGDFAKAEELCGRAILA-NPGD 123 (167)
Q Consensus 62 ~~~y~~~g~~d~A~~~~~kAL~l~P--------~--n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l-~P~~ 123 (167)
..+|++.++..-+...++..-...+ . -..+++.+|.++. ...+|.+|.+++..|++. -|.+
T Consensus 183 ~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~-~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 183 NNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYL-LNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHH-HHccHHHHHHHHHHHHHhcCCcc
Confidence 3578888888888888765433332 1 1356777888776 799999999999999998 7755
No 316
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=54.88 E-value=26 Score=32.66 Aligned_cols=52 Identities=17% Similarity=0.065 Sum_probs=40.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 046296 95 YARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESYFDQAV 152 (167)
Q Consensus 95 lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al 152 (167)
+...+. ..+.++-| +..+..-|.++-.-+.+|.+++. .|++++|..+|++|-
T Consensus 816 l~~~L~-~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~-~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 816 LVEKLF-LFKQYNAC----MQLIGWLNSDPIAVYLKALIYLK-SKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHH-HTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHH-TTCHHHHHHHHHTCC
T ss_pred HHHHHH-HhcHHHHH----HHHHhhcCCChHHHHHHHHHHHH-cCCHHHHHHHHHHHh
Confidence 334443 56776544 44667778899888999999999 999999999999874
No 317
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=53.42 E-value=60 Score=24.83 Aligned_cols=52 Identities=13% Similarity=0.106 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 71 SSSTDAYNEKMIEAN--PGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGD 123 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~--P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~ 123 (167)
...+...|+.+.... -..+.++-.+|.++. ..+++.+|.+.|++.|+..-.-
T Consensus 95 ~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE-~~g~~~~A~~Vy~~GI~~~A~P 148 (202)
T 3esl_A 95 FHESENTFKYMFNKGIGTKLSLFYEEFSKLLE-NAQFFLEAKVLLELGAENNCRP 148 (202)
T ss_dssp HHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCBS
T ss_pred cCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCcc
Confidence 456666666666543 456788888998885 8999999999999999976543
No 318
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=53.21 E-value=19 Score=32.03 Aligned_cols=85 Identities=14% Similarity=-0.010 Sum_probs=60.9
Q ss_pred hcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH--------------------
Q 046296 66 NNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGN-------------------- 125 (167)
Q Consensus 66 ~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~-------------------- 125 (167)
.+.++++.|..+|+++-...+..+...+.++..+. ..|+.++|..+|+++... .+..
T Consensus 296 lr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~-~~g~~~~a~~~~~~~a~~--~~fYg~lAa~~Lg~~~~~~~~~~~ 372 (618)
T 1qsa_A 296 LGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLL-ERGREAEAKEILHQLMQQ--RGFYPMVAAQRIGEEYELKIDKAP 372 (618)
T ss_dssp HHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTS--CSHHHHHHHHHTTCCCCCCCCCCC
T ss_pred HHCCCHHHHHHHHHHccccccccHhHHHHHHHHHH-HcCCHHHHHHHHHHHhcC--CChHHHHHHHHcCCCCCCCCCCCC
Confidence 35589999999998866544566888888899875 799999999999987641 1110
Q ss_pred ----------HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 126 ----------ILSLYADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 126 ----------al~~lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
.....+..++. .|....|...+..+++.
T Consensus 373 ~~~~~~~~~~~~~~r~~~L~~-~g~~~~a~~ew~~~~~~ 410 (618)
T 1qsa_A 373 QNVDSALTQGPEMARVRELMY-WNLDNTARSEWANLVKS 410 (618)
T ss_dssp SCCCCHHHHSHHHHHHHHHHH-TTCHHHHHHHHHHHHTT
T ss_pred hhHHhhhccChHHHHHHHHHH-CCChhhHHHHHHHHHhc
Confidence 11233455666 78888888888777654
No 319
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=53.02 E-value=42 Score=28.22 Aligned_cols=47 Identities=11% Similarity=0.056 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 107 AKAEELCGRAILANPG--------DGNILSLYADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 107 e~A~~~~~rAl~l~P~--------~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
+.-++-++.|+..-|. -..++..+|.+++- ++++++|+++.+++|..
T Consensus 171 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~-~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 171 TEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLY-KGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHhc
Confidence 4555667777776553 35778889999998 99999999999999874
No 320
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=52.33 E-value=7.6 Score=33.08 Aligned_cols=31 Identities=16% Similarity=0.017 Sum_probs=27.3
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 123 DGNILSLYADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 123 ~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
...++..+|.+++. ++++++|+++.+++|..
T Consensus 190 k~aA~aLlARvyL~-~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 190 TDVVNGLMARAYLL-TGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHH-TTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhc
Confidence 45678889999998 99999999999999875
No 321
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=51.76 E-value=50 Score=27.67 Aligned_cols=48 Identities=21% Similarity=0.155 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 106 FAKAEELCGRAILANPG--------DGNILSLYADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 106 ~e~A~~~~~rAl~l~P~--------~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
++..++-++.|+..-|. -..++..+|.+++. ++++++|+++.+++|..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~-~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLY-HDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHh-cccHHHHHHHHHHHHhC
Confidence 34555667778776553 35678889999998 99999999999999964
No 322
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=50.82 E-value=47 Score=24.48 Aligned_cols=57 Identities=9% Similarity=-0.140 Sum_probs=41.0
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCC---HHHHHHHHH----H-HHHHcCCHHHHHHHHHHHHHh
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGN---ALLLGNYAR----F-LKEVRGDFAKAEELCGRAILA 119 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n---~~~l~~lA~----~-l~~~~gd~e~A~~~~~rAl~l 119 (167)
..++..++|=+|-..++.+....|.. ..+|..+.+ . +...+++..-|..++++|+..
T Consensus 40 i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 40 VRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 44666789999999999999887665 233333333 1 223689999999999999873
No 323
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=50.44 E-value=98 Score=25.45 Aligned_cols=26 Identities=19% Similarity=0.259 Sum_probs=23.8
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 046296 122 GDGNILSLYADLIWQAHKDASRAESYF 148 (167)
Q Consensus 122 ~~~~al~~lA~~l~~~~g~~~eA~~~~ 148 (167)
.+|..+..+|.++++ .+++.+|+.+|
T Consensus 134 Gdp~LH~~ig~~~~~-e~~~~~Ae~H~ 159 (336)
T 3lpz_A 134 GDPELHHVVGTLYVE-EGEFEAAEKHL 159 (336)
T ss_dssp CCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHc-cCCHHHHHHHH
Confidence 578999999999999 99999999998
No 324
>2cr7_A Paired amphipathic helix protein SIN3B; paired amphipathic helix repeat, transcriptional repressor, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rmr_A 2rms_A
Probab=49.36 E-value=36 Score=21.98 Aligned_cols=60 Identities=7% Similarity=0.063 Sum_probs=35.6
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 046296 69 HGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILS 128 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~ 128 (167)
-.++.|+.+++++=+.--++|..+..+-.++...+...-.....+++...+--++++.+.
T Consensus 8 ~~~~dA~~yl~~VK~rF~~~p~~Y~~FL~im~~fk~~~~~~~~v~~rV~~Lf~~hpdLi~ 67 (80)
T 2cr7_A 8 VHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIV 67 (80)
T ss_dssp CCSCCSHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHGGGCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHcCCHHHHH
Confidence 467889999999888877888888776666553222111222344444444444554443
No 325
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=49.07 E-value=42 Score=27.26 Aligned_cols=66 Identities=12% Similarity=-0.078 Sum_probs=44.1
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH----------------H---hCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 046296 87 GNALLLGNYARFLKEVRGDFAKAEELCGRAI----------------L---ANPGDGNILSLYADLIWQAHKDASRAESY 147 (167)
Q Consensus 87 ~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl----------------~---l~P~~~~al~~lA~~l~~~~g~~~eA~~~ 147 (167)
.+|..+..+|..+. ..+++.+|+.+|-..- + -.|.....+...+++.+...++...|...
T Consensus 132 Gdp~LH~~~a~~~~-~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~ 210 (312)
T 2wpv_A 132 GDPYLHNTIGSKLL-EGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHES 210 (312)
T ss_dssp CCHHHHHHHHHHHH-HTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHH
T ss_pred CCHHHHHHHHHHHh-hcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 48999999999887 7899999998874211 1 13344455555555444337888888777
Q ss_pred HHHHHH
Q 046296 148 FDQAVK 153 (167)
Q Consensus 148 ~e~Al~ 153 (167)
|+.-.+
T Consensus 211 ~~~f~~ 216 (312)
T 2wpv_A 211 KDIFLE 216 (312)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776543
No 326
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=47.59 E-value=62 Score=21.79 Aligned_cols=26 Identities=8% Similarity=0.135 Sum_probs=11.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 046296 130 YADLIWQAHKDASRAESYFDQAVKSAP 156 (167)
Q Consensus 130 lA~~l~~~~g~~~eA~~~~e~Al~l~P 156 (167)
+|..+.. +|+++.|+.+|-+||..-|
T Consensus 26 lGE~L~~-~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 26 LGEELLA-QGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHH-HTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHH-CCCHHHHHHHHHHHHHHcC
Confidence 3444444 4444444444444444444
No 327
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=47.45 E-value=72 Score=24.66 Aligned_cols=85 Identities=12% Similarity=-0.026 Sum_probs=46.5
Q ss_pred hhhcCCChHHHHHHHHHHHHh---CC-----CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIEA---NP-----GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIW 135 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l---~P-----~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~ 135 (167)
++..+.++++|+...++.=+. .+ .++.+...+-.-+.++. ..=.+.+-+.+.. ...+.........+.
T Consensus 27 v~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~---~~L~~~L~~~l~~-~~~~~~~r~~v~~L~ 102 (235)
T 2d2s_A 27 IELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRR---EAISSKLSQSILS-SNEIVHLKSGTENMI 102 (235)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHH---HHHHHHHHHHHHT-CSSHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHH---HHHHHHHHHHHHh-cCCHHHHHHHHHHHH
Confidence 456778999998887764433 23 12222222222121111 1112233334444 445555555556677
Q ss_pred HHcCCHHHHHHHHHHHHH
Q 046296 136 QAHKDASRAESYFDQAVK 153 (167)
Q Consensus 136 ~~~g~~~eA~~~~e~Al~ 153 (167)
+ .|+.++|.+.|-++-.
T Consensus 103 r-Lg~~~~A~~lfL~~rs 119 (235)
T 2d2s_A 103 K-LGLPEQALDLFLQNRS 119 (235)
T ss_dssp H-TTCHHHHHHHHHHHHH
T ss_pred H-CCChhHHHHHHHHHHH
Confidence 7 9999999999988754
No 328
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=45.25 E-value=19 Score=23.42 Aligned_cols=16 Identities=13% Similarity=0.250 Sum_probs=8.8
Q ss_pred cCCHHHHHHHHHHHHH
Q 046296 138 HKDASRAESYFDQAVK 153 (167)
Q Consensus 138 ~g~~~eA~~~~e~Al~ 153 (167)
.|+|+.|+.||+.+++
T Consensus 25 ~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 25 LGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HTCCHHHHHHHHHHHH
T ss_pred hcChHHHHHHHHHHHH
Confidence 4555555555555554
No 329
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=43.16 E-value=14 Score=24.81 Aligned_cols=15 Identities=27% Similarity=0.266 Sum_probs=8.1
Q ss_pred CCHHHHHHHHHHHHH
Q 046296 104 GDFAKAEELCGRAIL 118 (167)
Q Consensus 104 gd~e~A~~~~~rAl~ 118 (167)
++-++|+.+|++.|.
T Consensus 33 G~k~~A~~~YkkGi~ 47 (89)
T 3eab_A 33 GQKEQAVEWYKKGIE 47 (89)
T ss_dssp SSGGGSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 555555555555543
No 330
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=42.63 E-value=55 Score=27.57 Aligned_cols=49 Identities=8% Similarity=0.013 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 046296 106 FAKAEELCGRAILANPG--------DGNILSLYADLIWQAHKDASRAESYFDQAVKSA 155 (167)
Q Consensus 106 ~e~A~~~~~rAl~l~P~--------~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~ 155 (167)
++.-++-++.|+..-|. -..++..+|.+++- ++++++|+++.+++|...
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~-~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLN-MGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhCC
Confidence 34455666677765443 35678889999998 999999999999999754
No 331
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=42.60 E-value=90 Score=25.68 Aligned_cols=65 Identities=14% Similarity=0.089 Sum_probs=43.5
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHH-------H---------HHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 046296 87 GNALLLGNYARFLKEVRGDFAKAEELCGR-------A---------ILANPGDGNILSLYADLIWQAHKDASRAESYFDQ 150 (167)
Q Consensus 87 ~n~~~l~~lA~~l~~~~gd~e~A~~~~~r-------A---------l~l~P~~~~al~~lA~~l~~~~g~~~eA~~~~e~ 150 (167)
.+|..+..+|..+. ..+++.+|+.+|-. . .+..|..+..+...|++.+...++...|...|+.
T Consensus 134 Gdp~LH~~ig~~~~-~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~dlfiaRaVL~yL~l~n~~~A~~~~~~ 212 (336)
T 3lpz_A 134 GDPELHHVVGTLYV-EEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAPLYCARAVLPYLLVANVRAANTAYRI 212 (336)
T ss_dssp CCHHHHHHHHHHHH-HTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-ccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 57889999998887 67888888877621 1 1123455666666666655547888888776554
Q ss_pred HH
Q 046296 151 AV 152 (167)
Q Consensus 151 Al 152 (167)
-+
T Consensus 213 f~ 214 (336)
T 3lpz_A 213 FT 214 (336)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 332
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=42.48 E-value=77 Score=26.18 Aligned_cols=52 Identities=23% Similarity=0.178 Sum_probs=36.3
Q ss_pred HHcCCHHHHHHHHHHHHHhC---------------CCCH--HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 101 EVRGDFAKAEELCGRAILAN---------------PGDG--NILSLYADLIWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 101 ~~~gd~e~A~~~~~rAl~l~---------------P~~~--~al~~lA~~l~~~~g~~~eA~~~~e~Al~ 153 (167)
....+.++|++++++....- -..+ .+....+..++. .++.++|..+++++-.
T Consensus 87 ~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~-~~d~~~a~~~l~~~~~ 155 (393)
T 4b4t_O 87 KDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLL-KNDLVKARDLLDDLEK 155 (393)
T ss_dssp HHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHH-HSCHHHHHHHHHHHHH
T ss_pred hhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 35778999999988763211 0122 344456777787 8999999999999864
No 333
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=41.63 E-value=66 Score=27.10 Aligned_cols=30 Identities=17% Similarity=0.132 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 124 GNILSLYADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 124 ~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
..++..+|.+++- ++++++|+++.+++|..
T Consensus 197 ~aA~allarvyL~-~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 197 LSAYSVLAHICAW-QGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhhHHHHHHHHHHHHhC
Confidence 3577889999998 99999999999999975
No 334
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=41.24 E-value=5.6 Score=31.85 Aligned_cols=18 Identities=11% Similarity=0.017 Sum_probs=0.0
Q ss_pred HcCCHHHHHHHHHHHHHh
Q 046296 102 VRGDFAKAEELCGRAILA 119 (167)
Q Consensus 102 ~~gd~e~A~~~~~rAl~l 119 (167)
..+++++|+.+|+.||++
T Consensus 35 ~~g~y~eAl~lY~eaIe~ 52 (257)
T 2ymb_A 35 SESRYPQALVCYQEGIDL 52 (257)
T ss_dssp ------------------
T ss_pred HcCCHHHHHHHHHHHHHH
Confidence 577888888877777653
No 335
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=41.11 E-value=72 Score=24.77 Aligned_cols=36 Identities=22% Similarity=0.443 Sum_probs=28.4
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 87 GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGD 123 (167)
Q Consensus 87 ~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~ 123 (167)
..+.+|-.+|.+|. ..+++.+|.+.|++.|+..-.-
T Consensus 148 ~~AlfYe~wA~~lE-~~g~~~~A~~Vy~~Gi~~~A~P 183 (223)
T 4aez_C 148 ESSIFYEEYANYFE-SRGLFQKADEVYQKGKRMKAKP 183 (223)
T ss_dssp TBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTCBS
T ss_pred hHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCcc
Confidence 34556667787774 8999999999999999976543
No 336
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=40.90 E-value=70 Score=21.47 Aligned_cols=16 Identities=25% Similarity=0.333 Sum_probs=7.5
Q ss_pred HHHHHhCCCCHHHHHH
Q 046296 114 GRAILANPGDGNILSL 129 (167)
Q Consensus 114 ~rAl~l~P~~~~al~~ 129 (167)
.++++.+|+||.++..
T Consensus 40 l~~L~~~psNPa~LAe 55 (92)
T 2g0u_A 40 QANLTKNPSDPTALAN 55 (92)
T ss_dssp HHHHHHSTTCHHHHHH
T ss_pred HHHHhcCCCCHHHHHH
Confidence 3344445555544433
No 337
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=40.85 E-value=1.3e+02 Score=23.57 Aligned_cols=66 Identities=12% Similarity=0.089 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHHhCCCCHHH-------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 046296 71 SSSTDAYNEKMIEANPGNALL-------LGNYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQ 136 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n~~~-------l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~ 136 (167)
++.|+..++..-+-.|-.... +--.|.+.+...+.+++|++.++|.+.-+|.+-.....|..+..+
T Consensus 88 LESAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~ 160 (235)
T 3bu8_A 88 LESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIRE 160 (235)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhc
Confidence 667888777776666543322 111233333467889999999999888777776676666666544
No 338
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=40.72 E-value=92 Score=22.62 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 046296 87 GNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGN 125 (167)
Q Consensus 87 ~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~ 125 (167)
..+.++-.+|.++. ..+++.+|.+.|++.|+.+..-..
T Consensus 99 ~~AlfYe~wA~~lE-~~g~~~~A~~Vy~~Gi~~~A~P~~ 136 (152)
T 4a1g_A 99 LSSPLYIAWAGHLE-AQGELQHASAVLQRGIQNQAEPRE 136 (152)
T ss_dssp TBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCBSHH
T ss_pred HHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCccHH
Confidence 34566667887774 899999999999999997654443
No 339
>4ah2_B HLA class II histocompatibility antigen gamma CHA class II histocompatibility antigen\,DRB1-1...; MHC II, immune system, SELF antigen; 2.36A {Homo sapiens}
Probab=36.26 E-value=7.2 Score=30.25 Aligned_cols=17 Identities=41% Similarity=0.786 Sum_probs=3.5
Q ss_pred chheeeecccccCCCCc
Q 046296 22 YVQTMVMGGGLGNNGGK 38 (167)
Q Consensus 22 ~~~~~~~~~~~~~~~~~ 38 (167)
-+|++-||||+.||||.
T Consensus 10 ~~~~~~~~~~~~~~~~~ 26 (229)
T 4ah2_B 10 LMQALPMGGGGSGGGGS 26 (229)
T ss_dssp CCCCC------------
T ss_pred HHhhcccCCCcCCCCCC
Confidence 46788899887666654
No 340
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=35.88 E-value=81 Score=24.32 Aligned_cols=33 Identities=21% Similarity=0.156 Sum_probs=16.5
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 046296 101 EVRGDFAKAEELCGRAILANPGDGNILSLYADL 133 (167)
Q Consensus 101 ~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~ 133 (167)
...+.+++|++.++|.+.-+|.+......|..+
T Consensus 128 iekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~I 160 (211)
T 3bqo_A 128 MENGNFKEAEEVFERIFGDPNSHMPFKSKLLMI 160 (211)
T ss_dssp HHTTCHHHHHHHHHHHC-----CCTTHHHHHHH
T ss_pred HHccchHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 356777777777777666555544444444443
No 341
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=35.18 E-value=85 Score=26.74 Aligned_cols=48 Identities=15% Similarity=0.036 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHhCCC-----------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 106 FAKAEELCGRAILANPG-----------DGNILSLYADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 106 ~e~A~~~~~rAl~l~P~-----------~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
++.-++-++.|+..-|. ...++..+|.+++. ++++++|+++.+++|..
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~-~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELY-DKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHh
Confidence 34455667777766553 24678889999998 99999999999999964
No 342
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=34.98 E-value=76 Score=21.46 Aligned_cols=14 Identities=21% Similarity=0.150 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHhC
Q 046296 107 AKAEELCGRAILAN 120 (167)
Q Consensus 107 e~A~~~~~rAl~l~ 120 (167)
.+|..++..|+++.
T Consensus 39 ~kAa~yL~eAmklt 52 (97)
T 2crb_A 39 RKATTYLSEAMKLT 52 (97)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhh
Confidence 34444555555554
No 343
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=34.47 E-value=1.5e+02 Score=25.10 Aligned_cols=50 Identities=16% Similarity=0.194 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHHhCCCC-----------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 046296 71 SSSTDAYNEKMIEANPGN-----------ALLLGNYARFLKEVRGDFAKAEELCGRAILANP 121 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n-----------~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P 121 (167)
++..+..++.|+..=|.. ..++..+|+++. .++++++|+++++++|...+
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL-~~~~~~~A~~~a~~vi~~~~ 234 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACL-YARQWEKAKTYSDKLLAKDN 234 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHhcCC
Confidence 556677778887765532 356777888886 79999999999999997643
No 344
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=31.34 E-value=1.6e+02 Score=24.44 Aligned_cols=48 Identities=17% Similarity=-0.005 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 71 SSSTDAYNEKMIEANPGN--------ALLLGNYARFLKEVRGDFAKAEELCGRAILA 119 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n--------~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l 119 (167)
++..+..++.|+..=|.. ..++..+|+++. .++++++|+++++++|..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL-~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYL-YHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHH-hcccHHHHHHHHHHHHhC
Confidence 566777788888775542 456677888876 799999999999999964
No 345
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=31.04 E-value=87 Score=24.18 Aligned_cols=57 Identities=9% Similarity=0.061 Sum_probs=35.6
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYAR-FLKEVRGDFAKAEELCGRAILANPGDGNI 126 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~-~l~~~~gd~e~A~~~~~rAl~l~P~~~~a 126 (167)
....|+..|..||..+|-++.-...... ++.-...|-.-.+.+|+.+...+|..+.-
T Consensus 100 rrr~Ale~y~~ALq~~pp~~~~il~aLk~yirae~KDR~Hti~hy~Hv~~~dpe~A~~ 157 (211)
T 3umh_A 100 RRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQ 157 (211)
T ss_dssp HHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCHHHHHh
Confidence 3456888888888888877654333222 22112345556778888888888865543
No 346
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=30.99 E-value=1.1e+02 Score=26.13 Aligned_cols=47 Identities=13% Similarity=0.043 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHhCCC-------------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 107 AKAEELCGRAILANPG-------------DGNILSLYADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 107 e~A~~~~~rAl~l~P~-------------~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
+.-++-++.|+..=|. ...++..+|.+++. .+++++|.++.+++|..
T Consensus 168 ~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~-~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 168 KWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCML-QKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHhc
Confidence 3444556677766552 24678889999998 89999999999999974
No 347
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=30.59 E-value=67 Score=27.18 Aligned_cols=47 Identities=15% Similarity=0.119 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 106 FAKAEELCGRAILANPG--------DGNILSLYADLIWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 106 ~e~A~~~~~rAl~l~P~--------~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~ 153 (167)
++.-++-++.|+..-|. ...++..+|.+++. ++++++|+++.+++|.
T Consensus 154 y~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~-~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 154 WAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVY-EENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHH-TTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHh
Confidence 45555667777776552 34678889999998 9999999999999875
No 348
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=30.43 E-value=1.6e+02 Score=24.51 Aligned_cols=48 Identities=15% Similarity=0.140 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 71 SSSTDAYNEKMIEANPGN--------ALLLGNYARFLKEVRGDFAKAEELCGRAILA 119 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n--------~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l 119 (167)
++.-+..++.|+..=|.. ..++..+|+++. .++++++|+++++++|..
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL-~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYL-YKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 556777788888765542 456777888876 789999999999999974
No 349
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=29.14 E-value=57 Score=22.70 Aligned_cols=73 Identities=15% Similarity=0.085 Sum_probs=46.6
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 046296 69 HGSSSTDAYNEKMIEANPGNALLLG-NYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESY 147 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~n~~~l~-~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~ 147 (167)
+.+++|..+ -.-|+..|. .++-. -....|. .+|+|++|..+.+.. | .|+.-..+|.+-++ .|-.+++...
T Consensus 21 H~HqEA~tI-AdwL~~~~~-~E~v~lIR~sSLm-NrG~Yq~Al~l~~~~----c-~pdlepw~ALce~r-lGl~s~le~r 91 (116)
T 2p58_C 21 HYHEEANCI-AEWLHLKGE-EEAVQLIRLSSLM-NRGDYASALQQGNKL----A-YPDLEPWLALCEYR-LGLGSALESR 91 (116)
T ss_dssp TCHHHHHHH-HHHHHHTTC-HHHHHHHHHHHHH-HTTCHHHHHHHHTTS----C-CGGGHHHHHHHHHH-HTCHHHHHHH
T ss_pred hHHHHHHHH-HHHHHhCCc-HHHHHHHHHHHHH-cchhHHHHHHhcCCC----C-CchHHHHHHHHHHh-cccHHHHHHH
Confidence 567776554 345667777 44322 2222343 799999998765433 2 55555667778888 9999988887
Q ss_pred HHH
Q 046296 148 FDQ 150 (167)
Q Consensus 148 ~e~ 150 (167)
+.+
T Consensus 92 L~~ 94 (116)
T 2p58_C 92 LNR 94 (116)
T ss_dssp HHH
T ss_pred HHH
Confidence 733
No 350
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=29.02 E-value=1.7e+02 Score=21.40 Aligned_cols=38 Identities=18% Similarity=0.169 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 046296 88 NALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNI 126 (167)
Q Consensus 88 n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~a 126 (167)
.+.++..+|.++. ..+++.+|.+.|+++|+....-...
T Consensus 95 ~AlfY~~wA~~lE-~~~~~~~A~~Iy~~Gi~~~A~P~~~ 132 (164)
T 2wvi_A 95 LAQFYISWAEEYE-ARENFRKADAIFQEGIQQKAEPLER 132 (164)
T ss_dssp BHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCBSHHH
T ss_pred hHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCcHHH
Confidence 3555666777774 8999999999999999987544433
No 351
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=28.95 E-value=56 Score=29.09 Aligned_cols=38 Identities=16% Similarity=0.001 Sum_probs=33.2
Q ss_pred chhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 046296 63 NYSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLK 100 (167)
Q Consensus 63 ~~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~ 100 (167)
+..+..+++.-|.....+++..+|+|..+...+|.+|.
T Consensus 457 ~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~ 494 (658)
T 2cfu_A 457 RASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALE 494 (658)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 34456789999999999999999999999998888875
No 352
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=28.80 E-value=67 Score=21.93 Aligned_cols=30 Identities=23% Similarity=0.070 Sum_probs=17.6
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 123 DGNILSLYADLIWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 123 ~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~ 153 (167)
++.....-|.-..+ .|+|++|.+.+++|-+
T Consensus 19 ~ArS~~~eAl~~Ak-~g~fe~A~~~l~eA~~ 48 (105)
T 2e2a_A 19 DARSKLLEALKAAE-NGDFAKADSLVVEAGS 48 (105)
T ss_dssp HHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 33334444444555 7777777777776643
No 353
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=28.73 E-value=67 Score=21.82 Aligned_cols=29 Identities=21% Similarity=0.099 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 124 GNILSLYADLIWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 124 ~~al~~lA~~l~~~~g~~~eA~~~~e~Al~ 153 (167)
+.....-|.-..+ .|+|++|.+.+++|-+
T Consensus 18 Ars~~~eAl~~Ak-~g~fe~A~~~l~eA~~ 46 (103)
T 1wcr_A 18 ARSLAYAALKQAK-QGDFAAAKAMMDQSRM 46 (103)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 3333444444556 7888888777777643
No 354
>2czy_A Paired amphipathic helix protein SIN3B; SIN3, PAH1, transcriptional repressor, gene regulation; NMR {Mus musculus}
Probab=28.42 E-value=1.2e+02 Score=19.27 Aligned_cols=58 Identities=7% Similarity=0.082 Sum_probs=29.8
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPGDGNIL 127 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al 127 (167)
.++.|+.+++++=+.--++|..+..+-.++...+...-.....+++...+=-++++.+
T Consensus 3 ~~~dA~~yl~~VK~~F~~~p~~Y~~FL~im~~~k~~~~~~~~v~~rv~~Lf~~hpdLi 60 (77)
T 2czy_A 3 HVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLI 60 (77)
T ss_dssp SHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTTTCHHHH
T ss_pred CHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCHHHH
Confidence 3567777777776666667777666555544222111122234444444444444443
No 355
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=28.29 E-value=82 Score=22.19 Aligned_cols=43 Identities=7% Similarity=-0.212 Sum_probs=32.0
Q ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 68 NHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA 119 (167)
Q Consensus 68 ~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l 119 (167)
.++.+++..++++|.. ....|..+. ..++++.|.-++++|++.
T Consensus 3 ~~~~ee~~~wl~~A~~--------dl~~A~~~~-~~g~y~~a~F~aqQA~Ek 45 (141)
T 3o10_A 3 VGNPVEARRWLRQARA--------NFSAARNDL-HKNANEWVCFKCYLSTKL 45 (141)
T ss_dssp CCCHHHHHHHHHHHHH--------HHHHHGGGT-TTTCHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHh--------hhhHHhhHH-hhCccceEeeehhHHHHH
Confidence 5678888888888755 344455554 578899998888888874
No 356
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=28.24 E-value=52 Score=23.31 Aligned_cols=13 Identities=31% Similarity=0.710 Sum_probs=7.0
Q ss_pred CHHHHHHHHHHHH
Q 046296 105 DFAKAEELCGRAI 117 (167)
Q Consensus 105 d~e~A~~~~~rAl 117 (167)
++.+|.+++++..
T Consensus 89 ~L~~A~~~~~~y~ 101 (126)
T 2npu_A 89 DLMEAQEWCRKYM 101 (126)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4455555555554
No 357
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=28.15 E-value=2.5e+02 Score=23.00 Aligned_cols=85 Identities=13% Similarity=0.042 Sum_probs=50.2
Q ss_pred cCCChHHHHHHHHHHHHhC-------C--------CCH--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCC
Q 046296 67 NNHGSSSTDAYNEKMIEAN-------P--------GNA--LLLGNYARFLKEVRGDFAKAEELCGRAILA-------NPG 122 (167)
Q Consensus 67 ~~g~~d~A~~~~~kAL~l~-------P--------~n~--~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l-------~P~ 122 (167)
...+.++|+.++++..+.- + ..+ .+....+.++. ..++.++|..+++++-.. +|.
T Consensus 88 ~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl-~~~d~~~a~~~l~~~~~~l~~~~~~~~~ 166 (393)
T 4b4t_O 88 DSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYL-LKNDLVKARDLLDDLEKTLDKKDSIPLR 166 (393)
T ss_dssp HTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHSCCSSSH
T ss_pred hcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhhhccCCccHH
Confidence 3457788888887653221 0 122 33344555554 689999999999988643 222
Q ss_pred CHHHHHH-HHHHHHHHcCCHHHHHHHHHHHHH
Q 046296 123 DGNILSL-YADLIWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 123 ~~~al~~-lA~~l~~~~g~~~eA~~~~e~Al~ 153 (167)
....++. .+..+.. .+++.++...+-.++.
T Consensus 167 v~~~~y~~~~~~~~~-~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 167 ITNSFYSTNSQYFKF-KNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHh
Confidence 2222222 3334444 7888887777766665
No 358
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=34.07 E-value=12 Score=33.61 Aligned_cols=41 Identities=24% Similarity=0.329 Sum_probs=34.0
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH
Q 046296 102 VRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASR 143 (167)
Q Consensus 102 ~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~e 143 (167)
..++|.-|.+++..++..+|+|..+...+|.+|.+ ++...+
T Consensus 473 ~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~-l~~~~~ 513 (668)
T 2yhe_A 473 DKGDYRWAVQLGNHLVFADPANKDARALQADAMEQ-LGYQTE 513 (668)
Confidence 46788889999999999999999999999988877 665444
No 359
>3n44_F E1 envelope glycoprotein; viral protein, immature heterodimer, alphavirus, receptor BI membrane fusion; HET: NAG; 2.35A {Chikungunya virus} PDB: 3n41_F* 3n42_F* 3n43_F* 2xfc_A
Probab=27.07 E-value=12 Score=31.78 Aligned_cols=7 Identities=14% Similarity=-0.073 Sum_probs=0.9
Q ss_pred CCcchhh
Q 046296 60 SNNNYSN 66 (167)
Q Consensus 60 ~~~~~y~ 66 (167)
|+.++|+
T Consensus 18 ~~~~AYE 24 (473)
T 3n44_F 18 SGGGGYE 24 (473)
T ss_dssp -----CE
T ss_pred Cccceee
Confidence 4444543
No 360
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.61 E-value=1.6e+02 Score=20.43 Aligned_cols=47 Identities=9% Similarity=-0.076 Sum_probs=33.2
Q ss_pred cCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 046296 67 NNHGSSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPG 122 (167)
Q Consensus 67 ~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~ 122 (167)
-+..+++|..+..+||+++-. -.-..|.- -|.+.+..++++|.+..+
T Consensus 15 ik~~h~~AF~~Is~AL~~DE~---g~k~~Al~------lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 15 IREAYKKAFLFVNKGLNTDEL---GQKEEAKN------YYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---TCHHHHHH------HHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHHHHhhhhhc---CCHHHHHH------HHHHHHHHHHHhcccccc
Confidence 345688999999999998763 11112322 356899999999998774
No 361
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=26.59 E-value=76 Score=21.79 Aligned_cols=22 Identities=14% Similarity=-0.022 Sum_probs=13.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHH
Q 046296 130 YADLIWQAHKDASRAESYFDQAV 152 (167)
Q Consensus 130 lA~~l~~~~g~~~eA~~~~e~Al 152 (167)
-|.-..+ .++|++|.+.+++|-
T Consensus 28 eAl~~Ak-~gdfe~A~~~l~eA~ 49 (109)
T 3k1s_A 28 EALQFAK-QGKMAEADEAMVKAK 49 (109)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHH-cCCHHHHHHHHHHHH
Confidence 3333445 677777777776663
No 362
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=25.95 E-value=53 Score=22.79 Aligned_cols=73 Identities=11% Similarity=0.048 Sum_probs=46.6
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 046296 69 HGSSSTDAYNEKMIEANPGNALLLG-NYARFLKEVRGDFAKAEELCGRAILANPGDGNILSLYADLIWQAHKDASRAESY 147 (167)
Q Consensus 69 g~~d~A~~~~~kAL~l~P~n~~~l~-~lA~~l~~~~gd~e~A~~~~~rAl~l~P~~~~al~~lA~~l~~~~g~~~eA~~~ 147 (167)
+.+++|..+ -.-|+..|. .++-. -....|. .+|+|++|..+.+.. | .|+.-..+|.+-++ .|-.+++...
T Consensus 20 H~HqEA~tI-AdwL~~~~~-~E~v~lIR~sSLm-NrG~Yq~Al~l~~~~----c-~pdlepw~ALce~r-lGl~s~le~r 90 (115)
T 2uwj_G 20 HCHEEALCI-AEWLERLGQ-DEAARLIRISSLA-NQGRYQEALAFAHGN----P-WPALEPWFALCEWH-LGLGAALDRR 90 (115)
T ss_dssp TCHHHHHHH-HHHHHHTTC-HHHHHHHHHHHHH-HTTCHHHHHGGGTTC----C-CGGGHHHHHHHHHH-TTCHHHHHHH
T ss_pred hHHHHHHHH-HHHHHhCCc-HHHHHHHHHHHHH-cchhHHHHHHhcCCC----C-CchHHHHHHHHHHh-cccHHHHHHH
Confidence 567776554 345667777 44322 2222343 799999997764432 2 55555667788888 9999998888
Q ss_pred HHH
Q 046296 148 FDQ 150 (167)
Q Consensus 148 ~e~ 150 (167)
+.+
T Consensus 91 L~~ 93 (115)
T 2uwj_G 91 LAG 93 (115)
T ss_dssp HHH
T ss_pred HHH
Confidence 733
No 363
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=25.94 E-value=90 Score=17.22 Aligned_cols=14 Identities=21% Similarity=0.190 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHh
Q 046296 106 FAKAEELCGRAILA 119 (167)
Q Consensus 106 ~e~A~~~~~rAl~l 119 (167)
|++|+..|+.|++.
T Consensus 18 yDKAVaSfk~alk~ 31 (37)
T 3s6n_M 18 YDKAVASFKHALKN 31 (37)
T ss_pred HHHHHHHHHHHHhc
Confidence 55666666655543
No 364
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=25.88 E-value=79 Score=22.18 Aligned_cols=20 Identities=25% Similarity=0.074 Sum_probs=11.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHH
Q 046296 131 ADLIWQAHKDASRAESYFDQA 151 (167)
Q Consensus 131 A~~l~~~~g~~~eA~~~~e~A 151 (167)
|.-..+ .++|++|.+.+++|
T Consensus 44 Al~~Ak-~gdfe~A~~~l~eA 63 (120)
T 3l8r_A 44 AFDAMR-EKNYILAEQKLQEA 63 (120)
T ss_dssp HHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHH-cCCHHHHHHHHHHH
Confidence 333445 66666666666655
No 365
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=25.84 E-value=1.4e+02 Score=19.54 Aligned_cols=53 Identities=15% Similarity=0.046 Sum_probs=31.0
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHH--HHHHcCCHHHHHHHHHHHHH
Q 046296 97 RFLKEVRGDFAKAEELCGRAILANPGDG----NILSLYADL--IWQAHKDASRAESYFDQAVK 153 (167)
Q Consensus 97 ~~l~~~~gd~e~A~~~~~rAl~l~P~~~----~al~~lA~~--l~~~~g~~~eA~~~~e~Al~ 153 (167)
..++ ..++|=+|-+.++.+-...|... ..+..+|.. ... .++. |...+.+|+.
T Consensus 9 ~~lf-n~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~-~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 9 LGLW-RAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRR-LGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHH-HTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-TTCC--CHHHHHHHHH
T ss_pred HHHH-hCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHH-cCcH--HHHHHHHHHH
Confidence 3444 46777777777777777665421 222333333 333 5666 7777888766
No 366
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=25.42 E-value=1.5e+02 Score=25.21 Aligned_cols=45 Identities=7% Similarity=-0.012 Sum_probs=33.8
Q ss_pred HHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 74 TDAYNEKMIEA-----NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA 119 (167)
Q Consensus 74 A~~~~~kAL~l-----~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l 119 (167)
++.+|.+||.. +..+..-+..+|.+++ +.+++.+|+.++-.|-..
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~y-R~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYY-RKKKYYEAIASWVDAGYV 325 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhh-hcchHHHHHHHHHHHHHH
Confidence 67788888875 3445566667788887 799999999988877543
No 367
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=24.79 E-value=1.5e+02 Score=19.95 Aligned_cols=36 Identities=14% Similarity=0.219 Sum_probs=26.0
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 046296 122 GDGNILSLYADLIWQAHKDASRAESYFDQAVKSAPDDW 159 (167)
Q Consensus 122 ~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l~P~~~ 159 (167)
+.+..+..-|--+++ .++|-+|..+|+++..+. +|+
T Consensus 51 ~~~r~~i~eak~~y~-~~ny~ea~~l~~k~~n~t-en~ 86 (106)
T 2vkj_A 51 KKARSLIAEGKDLFE-TANYGEALVFFEKALNLS-DNE 86 (106)
T ss_dssp HHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC-CCH
T ss_pred hHHHHHHHHHHHHHH-hcchhHHHHHHHHHHccc-cCH
Confidence 445555566666777 899999999999988764 344
No 368
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=24.65 E-value=42 Score=26.32 Aligned_cols=37 Identities=11% Similarity=0.162 Sum_probs=30.8
Q ss_pred hhhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 046296 64 YSNNNHGSSSTDAYNEKMIEANPGNALLLGNYARFLK 100 (167)
Q Consensus 64 ~y~~~g~~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~ 100 (167)
++++++.+++|.+.+++.+..+|.+-.....|+.+..
T Consensus 123 VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~ 159 (235)
T 3bu8_A 123 ICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIR 159 (235)
T ss_dssp HHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHH
T ss_pred HHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHh
Confidence 4567889999999999999988888777777777654
No 369
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=24.06 E-value=2.1e+02 Score=23.87 Aligned_cols=50 Identities=12% Similarity=0.022 Sum_probs=37.6
Q ss_pred hHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 046296 71 SSSTDAYNEKMIEANPGN--------ALLLGNYARFLKEVRGDFAKAEELCGRAILANP 121 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n--------~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P 121 (167)
++.-+..++.|+..=|.. ..++..+|+++. .++++++|+++++++|....
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL-~~~~~~~A~~~a~~vi~~~~ 233 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYL-NMGEYQKAYDAATDVIKNNG 233 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhCCC
Confidence 556677777777765532 356777888876 79999999999999997543
No 370
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=23.09 E-value=1.7e+02 Score=25.33 Aligned_cols=56 Identities=11% Similarity=0.003 Sum_probs=38.8
Q ss_pred HHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHH
Q 046296 74 TDAYNEKMIEA-----NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA------NPGDGNILSLY 130 (167)
Q Consensus 74 A~~~~~kAL~l-----~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l------~P~~~~al~~l 130 (167)
++.+|.+||.. +..+..-+..+|.+++ +.+++.+|+.++-.|-.. ..+|.++|-.+
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~y-R~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf 364 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHC-RNRNVREALQAWADTATVIQDYNYCREDEEIYKEF 364 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhh-hcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHH
Confidence 67788888775 3445566677788887 799999999988877543 23455555443
No 371
>3pmr_A Amyloid-like protein 1; heparin binding, cell adhesion; 2.11A {Homo sapiens} SCOP: a.47.4.0 PDB: 3q7l_A 3q7g_A 3qmk_A*
Probab=22.30 E-value=80 Score=24.52 Aligned_cols=54 Identities=11% Similarity=0.050 Sum_probs=34.2
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCC
Q 046296 70 GSSSTDAYNEKMIEANPGNALLLGNYAR-FLKEVRGDFAKAEELCGRAILANPGD 123 (167)
Q Consensus 70 ~~d~A~~~~~kAL~l~P~n~~~l~~lA~-~l~~~~gd~e~A~~~~~rAl~l~P~~ 123 (167)
+...|+..|..||..+|-++.-....-. ++.-...|-.-.+..|+.+...+|..
T Consensus 107 rrr~Ale~y~~ALq~~pP~~~~vl~aLk~yirae~KDR~Htl~hf~Hv~~~dpe~ 161 (219)
T 3pmr_A 107 QRRAALEGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQHVAAVDPEK 161 (219)
T ss_dssp HHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHccCHHH
Confidence 3456888888888888777654433222 22212345566778888888888754
No 372
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=22.25 E-value=1.9e+02 Score=25.04 Aligned_cols=57 Identities=11% Similarity=0.006 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHH
Q 046296 73 STDAYNEKMIEA-----NPGNALLLGNYARFLKEVRGDFAKAEELCGRAILA------NPGDGNILSLY 130 (167)
Q Consensus 73 ~A~~~~~kAL~l-----~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l------~P~~~~al~~l 130 (167)
.++.+|++||.. ...+..-+..+|-+++ +.+++.+|+.++..|-.. ..+|.+++-.+
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~-R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~ 349 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHC-RNRNVREALQAWADTATVIQDYNYCREDEEIYKEF 349 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccCcccceeecchHHH-HhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHH
Confidence 356788888874 3344555666688887 789999999999887543 33566665444
No 373
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=22.19 E-value=1.1e+02 Score=19.45 Aligned_cols=42 Identities=5% Similarity=-0.117 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 046296 73 STDAYNEKMIEANPG-NALLLGNYARFLKEVRGDFAKAEELCGRA 116 (167)
Q Consensus 73 ~A~~~~~kAL~l~P~-n~~~l~~lA~~l~~~~gd~e~A~~~~~rA 116 (167)
+=...|++||...|. .|.-|-..|.+.- ..-.++.+..|...
T Consensus 14 eE~k~fe~ALa~~~~~tp~rWe~IA~~V~--gKT~eE~~~hY~~l 56 (73)
T 1wgx_A 14 KELQKLHCAFASLPKHKPGFWSEVAAAVG--SRSPEECQRKYMEN 56 (73)
T ss_dssp HHHHHHHHHHHHSCSSSSSHHHHHHHHTT--TSCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHCCCCCccHHHHHHHHcC--CCCHHHHHHHHHHH
Confidence 445678899998874 5777877776542 34566666666654
No 374
>3n3k_B Ubiquitin; hydrolase, protease, thiol protease, DUB, zinc ribbon, inhibitor, ubiqu acetylation, cytoplasm, isopeptide bond, nucleus; 2.60A {Homo sapiens} SCOP: d.15.1.1
Probab=21.62 E-value=33 Score=21.20 Aligned_cols=17 Identities=0% Similarity=0.124 Sum_probs=8.8
Q ss_pred hhhccccccCCccchheee
Q 046296 9 EKEGCEVEDDGGSYVQTMV 27 (167)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~ 27 (167)
--..|.+.++. .+.-++
T Consensus 58 tL~~~~i~~~~--~i~l~~ 74 (85)
T 3n3k_B 58 TLSDYNIHNHS--ALYLLL 74 (85)
T ss_dssp BTTTTTCCTTC--EEEEEE
T ss_pred CHHHCCCCCCC--EEEEEE
Confidence 34556664433 555555
No 375
>3mzk_B Protein transport protein SEC16; alpha-helical-stack, beta-propeller; 2.69A {Saccharomyces cerevisiae}
Probab=21.62 E-value=1.6e+02 Score=24.99 Aligned_cols=47 Identities=19% Similarity=0.121 Sum_probs=31.9
Q ss_pred HHHHHHHHhCCC------CHHHHHHHHHHHHHHcCCHHHHHHHHHHH---HHhCCCC
Q 046296 111 ELCGRAILANPG------DGNILSLYADLIWQAHKDASRAESYFDQA---VKSAPDD 158 (167)
Q Consensus 111 ~~~~rAl~l~P~------~~~al~~lA~~l~~~~g~~~eA~~~~e~A---l~l~P~~ 158 (167)
+.||-|+.+.|. -......+|.+|.+ .|..++|.+|.+.. |+..|..
T Consensus 337 EiyEya~sl~~~~~~~p~l~~yKl~~A~~Lae-~G~~~~A~~Ycdai~~~lk~~~k~ 392 (441)
T 3mzk_B 337 EIYEYIFSYDPKFKGFSSILPQKIYHASLLQE-QGLNSLGTKYTDYLSSSVRKLPKK 392 (441)
T ss_dssp HHHHHHHHTSTTCCCCGGGHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHhCCCccCChhHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHhCCCC
Confidence 455556665543 23445678889999 99999999998866 4444544
No 376
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=20.78 E-value=94 Score=26.19 Aligned_cols=46 Identities=15% Similarity=-0.034 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHh-CC--------CCHHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHHh
Q 046296 108 KAEELCGRAILA-NP--------GDGNILSLYADLIWQAHK---------DASRAESYFDQAVKS 154 (167)
Q Consensus 108 ~A~~~~~rAl~l-~P--------~~~~al~~lA~~l~~~~g---------~~~eA~~~~e~Al~l 154 (167)
.-++-++.|+.. -| +...++..+|.+++. ++ ++++|+++.+++|..
T Consensus 163 ~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~allarvyL~-~~~~~~~~~~~~~~~A~~~a~~vi~~ 226 (482)
T 3otn_A 163 IIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLADVYLT-YAGYPLQGGKSYYAESAKRSLEVIKS 226 (482)
T ss_dssp THHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHHHHHHH-HHSTTTCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHHHHHHH-hCCCcccCcHHHHHHHHHHHHHHHcc
Confidence 455667778776 34 335778889998887 66 899999999999974
No 377
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=20.75 E-value=61 Score=25.05 Aligned_cols=24 Identities=13% Similarity=0.235 Sum_probs=12.0
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC
Q 046296 133 LIWQAHKDASRAESYFDQAVKSAPD 157 (167)
Q Consensus 133 ~l~~~~g~~~eA~~~~e~Al~l~P~ 157 (167)
++.+ .|.|++|.+.|++.+..+|+
T Consensus 126 VCie-kg~Fk~A~eiLkr~f~~~~~ 149 (211)
T 3bqo_A 126 VCME-NGNFKEAEEVFERIFGDPNS 149 (211)
T ss_dssp HHHH-TTCHHHHHHHHHHHC-----
T ss_pred HHHH-ccchHHHHHHHHHHhcCCCC
Confidence 4444 66666666666666655443
No 378
>4aen_A HLA class II histocompatibility antigen, DR alpha; immune system, SELF antigen, invariant chain, CLIP; 2.20A {Homo sapiens}
Probab=20.59 E-value=21 Score=27.16 Aligned_cols=13 Identities=54% Similarity=0.979 Sum_probs=0.0
Q ss_pred ccccCCCCcccCC
Q 046296 30 GGLGNNGGKICGG 42 (167)
Q Consensus 30 ~~~~~~~~~~~~~ 42 (167)
||+|+|||+.||+
T Consensus 1 ~~~~~~~~~~~~~ 13 (207)
T 4aen_A 1 GGGGSGGGGSGGG 13 (207)
T ss_dssp -------------
T ss_pred CCCCCCCCCCCCc
Confidence 3445666667776
No 379
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=20.20 E-value=1.3e+02 Score=21.85 Aligned_cols=51 Identities=10% Similarity=-0.070 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 046296 71 SSSTDAYNEKMIEANPGNALLLGNYARFLKEVRGDFAKAEELCGRAILANPG 122 (167)
Q Consensus 71 ~d~A~~~~~kAL~l~P~n~~~l~~lA~~l~~~~gd~e~A~~~~~rAl~l~P~ 122 (167)
+..|...+.++...+|.-..+.-.+..++. ...+....+..|...+..||.
T Consensus 72 L~~a~~~L~~l~~~d~~l~~~~e~l~~a~~-~l~d~~~~L~~y~~~le~DP~ 122 (175)
T 4abx_A 72 IGEAVRALNAGAKYDETVMQLQNELRAALE-SVQAIAGELRDVAEGSAADPE 122 (175)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTCCCCHH
T ss_pred HHHHHHHHHHHHHhChhHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCCCHH
Confidence 556666666666666654444444444443 333333333444444444553
No 380
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=20.17 E-value=1.3e+02 Score=25.52 Aligned_cols=46 Identities=11% Similarity=0.035 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhCCC---------CHHHHHHHHHHHH------HHcCCHHHHHHHHHHHHH
Q 046296 107 AKAEELCGRAILANPG---------DGNILSLYADLIW------QAHKDASRAESYFDQAVK 153 (167)
Q Consensus 107 e~A~~~~~rAl~l~P~---------~~~al~~lA~~l~------~~~g~~~eA~~~~e~Al~ 153 (167)
+.-++-++.|+..-|. ...++..+|.+++ . ++++++|+++.+++|.
T Consensus 162 ~~I~~DL~~A~~~Lp~~~~~~gr~tk~aA~allarvyL~~~~y~~-~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 162 NWIEAELNEIKPNLPSPRSEYGVADQAVASALLARMYLNAEIYTG-KARYTECINACNEVIK 222 (499)
T ss_dssp HHHHHHHHHHGGGSCCTTSSTTSCCHHHHHHHHHHHHHTHHHHHS-SCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCcCHHHHHHHHHHHHHhhhhccC-hhHHHHHHHHHHHHHh
Confidence 4445556667665443 3456777888776 4 6899999999999996
No 381
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=20.07 E-value=6.2e+02 Score=24.75 Aligned_cols=48 Identities=8% Similarity=-0.083 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHh-CC----CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 046296 106 FAKAEELCGRAILA-NP----GDGNILSLYADLIWQAHKDASRAESYFDQAVKS 154 (167)
Q Consensus 106 ~e~A~~~~~rAl~l-~P----~~~~al~~lA~~l~~~~g~~~eA~~~~e~Al~l 154 (167)
+.+|+.+++..+.. .. .++.+...+|.+|.. .++.+.|..+++++.+.
T Consensus 1098 i~~A~~~L~~~~~~~~~~~~~~~~y~~AllAyAlal-~g~~~~~~~~l~~L~~~ 1150 (1451)
T 4acq_A 1098 VRNALFCLESAWKTAQEGDHGSHVYTKALLAYAFAL-AGNQDKRKEVLKSLNEE 1150 (1451)
T ss_dssp HHHHHHHHHHHHHHHTSSCSSSTHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhcccccccCChHHHHHHHHHHHh-cCChhHHHHHHHHHHHH
Confidence 45899999877654 22 358888888888887 88888888788777664
Done!