Your job contains 1 sequence.
>046297
MATLTRVTFISASSPSGSIGHSRNKCRQVASSIPFLNSLPEFSSHAFHARSSPSSLTSLP
RTRYRRSCVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES
KQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEG
AYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYL
ADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAK
FKAFDLASKPEGTGTPTKDFKALFSQITTRF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046297
(331 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040716 - symbol:AT2G37660 species:3702 "Arabi... 1145 3.4e-116 1
TAIR|locus:2185228 - symbol:AT5G02240 species:3702 "Arabi... 1055 1.2e-106 1
TAIR|locus:2040854 - symbol:AT2G34460 species:3702 "Arabi... 207 8.6e-17 1
UNIPROTKB|Q71X34 - symbol:LMOf2365_2365 "Putative unchara... 142 2.8e-11 2
TAIR|locus:2015651 - symbol:HCF173 "high chlorophyll fluo... 131 3.4e-11 2
TAIR|locus:2087901 - symbol:Tic62 "translocon at the inne... 173 2.9e-10 1
SGD|S000004696 - symbol:YMR090W "Putative protein of unkn... 124 1.3e-05 1
>TAIR|locus:2040716 [details] [associations]
symbol:AT2G37660 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0042742
"defense response to bacterium" evidence=IEP;RCA] [GO:0048046
"apoplast" evidence=IDA] [GO:0005507 "copper ion binding"
evidence=IDA] [GO:0000272 "polysaccharide catabolic process"
evidence=RCA] [GO:0005982 "starch metabolic process" evidence=RCA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009409 "response
to cold" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019684 "photosynthesis, light reaction"
evidence=RCA] InterPro:IPR016040 EMBL:AC004684 GO:GO:0009570
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0048046 GO:GO:0042742 GO:GO:0005507
GO:GO:0009579 eggNOG:COG0702 UniGene:At.26205 UniGene:At.66411
HOGENOM:HOG000262433 EMBL:AY042827 EMBL:AY081456 EMBL:AY085201
IPI:IPI00539231 PIR:T02532 RefSeq:NP_565868.1
ProteinModelPortal:O80934 SMR:O80934 STRING:O80934
SWISS-2DPAGE:O80934 World-2DPAGE:0003:O80934 PaxDb:O80934
PRIDE:O80934 ProMEX:O80934 EnsemblPlants:AT2G37660.1 GeneID:818343
KEGG:ath:AT2G37660 TAIR:At2g37660 InParanoid:O80934 OMA:GTNPNHP
PhylomeDB:O80934 ProtClustDB:CLSN2688756 Genevestigator:O80934
GermOnline:AT2G37660 Uniprot:O80934
Length = 325
Score = 1145 (408.1 bits), Expect = 3.4e-116, P = 3.4e-116
Identities = 216/248 (87%), Positives = 238/248 (95%)
Query: 84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIP 143
TVLVTGAGGRTGQIVYKKLKERSEQ+ ARGLVRT+ESK+KI G D++FIGDIRD+ SI P
Sbjct: 78 TVLVTGAGGRTGQIVYKKLKERSEQFVARGLVRTKESKEKINGEDEVFIGDIRDTASIAP 137
Query: 144 AIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA 203
A++GIDAL+ILTSAVP+MKP FDP+KGGRPEF+F++GAYPEQVDWIGQKNQIDAAKAAG
Sbjct: 138 AVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAGV 197
Query: 204 KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIR 263
KQIVLVGSMGGTN+NHPLNS+GN NILVWKRKAEQYLADSGIPYTIIRAGGLQDK+GGIR
Sbjct: 198 KQIVLVGSMGGTNINHPLNSIGNANILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGGIR 257
Query: 264 ELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKAL 323
ELLVGKDDELL+TETRTIARADVAEVC+QALQ EEAKFKA DLASKPEGTGTPTKDFKAL
Sbjct: 258 ELLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPEGTGTPTKDFKAL 317
Query: 324 FSQITTRF 331
F+Q+TT+F
Sbjct: 318 FTQVTTKF 325
>TAIR|locus:2185228 [details] [associations]
symbol:AT5G02240 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0048046 "apoplast" evidence=IDA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886
GO:GO:0009737 GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046
EMBL:AL162508 eggNOG:COG0702 UniGene:At.21103 HOGENOM:HOG000262433
ProtClustDB:CLSN2688756 EMBL:AY142045 EMBL:BT000751 EMBL:AK221714
EMBL:AF410336 IPI:IPI00530877 PIR:T48245 RefSeq:NP_568098.1
PDB:1XQ6 PDB:1YBM PDB:2Q46 PDB:2Q4B PDBsum:1XQ6 PDBsum:1YBM
PDBsum:2Q46 PDBsum:2Q4B ProteinModelPortal:Q94EG6 SMR:Q94EG6
PaxDb:Q94EG6 PRIDE:Q94EG6 ProMEX:Q94EG6 DNASU:830851
EnsemblPlants:AT5G02240.1 GeneID:830851 KEGG:ath:AT5G02240
TAIR:At5g02240 InParanoid:Q94EG6 OMA:KTGFRIA PhylomeDB:Q94EG6
EvolutionaryTrace:Q94EG6 Genevestigator:Q94EG6 GermOnline:AT5G02240
Uniprot:Q94EG6
Length = 253
Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
Identities = 202/248 (81%), Positives = 222/248 (89%)
Query: 84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIP 143
TVLVTGA GRTGQIVYKKLKE S+++ A+GLVR+ + K+KIGG D+FIGDI D++SI P
Sbjct: 6 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP 65
Query: 144 AIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA 203
A QGIDAL+ILTSAVPKMKP FDP KGGRPEF FE+G YPEQVDWIGQKNQIDAAK AG
Sbjct: 66 AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV 125
Query: 204 KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIR 263
K IV+VGSMGGTN +HPLN LGNGNILVWKRKAEQYLADSG PYTIIRAGGL DKEGG+R
Sbjct: 126 KHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR 185
Query: 264 ELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKAL 323
ELLVGKDDELLQT+T+T+ RADVAEVCIQAL FEEAK KAFDL SKPEGT TPTKDFKAL
Sbjct: 186 ELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKAL 245
Query: 324 FSQITTRF 331
FSQ+T+RF
Sbjct: 246 FSQVTSRF 253
>TAIR|locus:2040854 [details] [associations]
symbol:AT2G34460 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010287
"plastoglobule" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] InterPro:IPR016040
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0009941 GO:GO:0009535 GO:GO:0010287
EMBL:AC004077 EMBL:AC004481 eggNOG:COG0702 EMBL:AY034977
EMBL:AY056425 EMBL:BT000884 IPI:IPI00536241 PIR:T02333
RefSeq:NP_565789.2 UniGene:At.48549 UniGene:At.60259
ProteinModelPortal:Q8H124 SMR:Q8H124 IntAct:Q8H124 STRING:Q8H124
PaxDb:Q8H124 PRIDE:Q8H124 EnsemblPlants:AT2G34460.1 GeneID:818009
KEGG:ath:AT2G34460 TAIR:At2g34460 HOGENOM:HOG000262433
InParanoid:Q8H124 OMA:NFRAVEL PhylomeDB:Q8H124 ProtClustDB:PLN00141
Genevestigator:Q8H124 Uniprot:Q8H124
Length = 280
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 84/267 (31%), Positives = 128/267 (47%)
Query: 69 VSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD 128
+ K EA + K V V GA G+TG+ + ++L R +A + VR E K K D
Sbjct: 35 MEKGEAENAVKTKK--VFVAGATGQTGKRIVEQLLSRG--FAVKAGVRDVE-KAKTSFKD 89
Query: 129 DLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDW 188
D + +R +G D L + A G RP F + P +VD
Sbjct: 90 DPSLQIVRAD-----VTEGPDKL---AEVIGDDSQAVICATGFRPGF---DIFTPWKVDN 138
Query: 189 IGQKNQIDAAKAAGAKQIVLVGSM--GGTNLNHPLNSLG---N--GNILVWKRKAEQYLA 241
G N +DA + G ++ VLV S+ G + LN N G LV K +AE+Y+
Sbjct: 139 FGTVNLVDACRKQGVEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIK 198
Query: 242 DSGIPYTIIRAGGLQ-DKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAK 300
SGI YTI+R GGL+ D G +++ +D L + +I+R VAEV ++AL EE+
Sbjct: 199 KSGINYTIVRPGGLKNDPPTG--NVVMEPEDTLYEG---SISRDLVAEVAVEALLQEESS 253
Query: 301 FKAFDLASKPEGTGTPTKDFKALFSQI 327
FK ++ ++ E P + +K LF+ +
Sbjct: 254 FKVVEIVARAEA---PKRSYKDLFASV 277
>UNIPROTKB|Q71X34 [details] [associations]
symbol:LMOf2365_2365 "Putative uncharacterized protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE017262 GenomeReviews:AE017262_GR eggNOG:COG0702 OMA:NFRAVEL
HOGENOM:HOG000262434 RefSeq:YP_014954.1 ProteinModelPortal:Q71X34
STRING:Q71X34 GeneID:2797166 KEGG:lmf:LMOf2365_2365 PATRIC:20326096
ProtClustDB:CLSK564896 Uniprot:Q71X34
Length = 209
Score = 142 (55.0 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 44/135 (32%), Positives = 66/135 (48%)
Query: 186 VDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGI 245
+D G I+ AK G ++ ++V S G N + SL + L K+ A++ L SG+
Sbjct: 85 IDQNGAIKAIETAKEKGVRRFIIVSSYGADNPENGPESLIH--YLKAKQAADEELKRSGL 142
Query: 246 PYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFD 305
YTI+R GL D GK E+ + T TI RADVA+ +AL + + +K +
Sbjct: 143 DYTIVRPVGLSDDPA------TGKIAEVSEKPTTTIPRADVADFISEALSEKSSFYKTYT 196
Query: 306 LASKPEGTGTPTKDF 320
+ E TP K F
Sbjct: 197 I----ESGDTPIKHF 207
Score = 58 (25.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--GADDLFIGDIR 136
VLV GA G+ G+++ +KL + + R +VR E ++ GA + I D++
Sbjct: 3 VLVIGANGKIGRLLVEKLA-MEKGFFVRAMVRKAEQVSELEKLGAKPI-IADLK 54
>TAIR|locus:2015651 [details] [associations]
symbol:HCF173 "high chlorophyll fluorescence phenotype
173" species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0006413
"translational initiation" evidence=IMP] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006413 GO:GO:0009941 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR013857 Pfam:PF08547 eggNOG:COG0702
EMBL:AY062632 EMBL:AY128723 IPI:IPI00529705 RefSeq:NP_173116.1
UniGene:At.27283 UniGene:At.49888 ProteinModelPortal:Q8W4D6
SMR:Q8W4D6 STRING:Q8W4D6 PaxDb:Q8W4D6 PRIDE:Q8W4D6
EnsemblPlants:AT1G16720.1 GeneID:838243 KEGG:ath:AT1G16720
TAIR:At1g16720 HOGENOM:HOG000238768 InParanoid:Q8W4D6 OMA:KANNYLT
PhylomeDB:Q8W4D6 ProtClustDB:CLSN2679821 ArrayExpress:Q8W4D6
Genevestigator:Q8W4D6 Uniprot:Q8W4D6
Length = 598
Score = 131 (51.2 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 39/113 (34%), Positives = 57/113 (50%)
Query: 195 IDAAKAAGAKQIVLVGSMG-GTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAG 253
I A A +LV G G N +L KR E L SG+ YTIIR G
Sbjct: 458 IKALPAGQETDFILVSCTGSGVEANR------REQVLKAKRAGEDSLRRSGLGYTIIRPG 511
Query: 254 GLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDL 306
L+++ GG R L+ + + + Q I+ ADVA++C++AL A+ K+FD+
Sbjct: 512 PLKEEPGGQRALIFDQGNRISQG----ISCADVADICVKALHDSTARNKSFDV 560
Score = 96 (38.9 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT--EESKQKIGGADDLFIGDIRDSNSI 141
TVLV GA R G+IV +KL R Y + LVR EE + + D+ +GD+ + +++
Sbjct: 164 TVLVVGATSRIGRIVVRKLMLRG--YTVKALVRKQDEEVMSMLPRSVDIVVGDVGEPSTL 221
Query: 142 IPAIQGIDALIILTSA 157
A++ +I +A
Sbjct: 222 KSAVESCSKIIYCATA 237
>TAIR|locus:2087901 [details] [associations]
symbol:Tic62 "translocon at the inner envelope membrane
of chloroplasts 62" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0010103
"stomatal complex morphogenesis" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0019684 "photosynthesis, light
reaction" evidence=RCA] InterPro:IPR016040 GO:GO:0009570
EMBL:CP002686 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0015031
GO:GO:0009941 GO:GO:0009706 GO:GO:0009535 eggNOG:COG0702
EMBL:AP002039 EMBL:BT002039 EMBL:BT008403 IPI:IPI00530638
RefSeq:NP_188519.2 UniGene:At.27605 ProteinModelPortal:Q8H0U5
STRING:Q8H0U5 PaxDb:Q8H0U5 PRIDE:Q8H0U5 EnsemblPlants:AT3G18890.1
GeneID:821422 KEGG:ath:AT3G18890 TAIR:At3g18890
HOGENOM:HOG000090541 InParanoid:Q8H0U5 OMA:ICCIGAS PhylomeDB:Q8H0U5
ProtClustDB:PLN03209 Genevestigator:Q8H0U5 Uniprot:Q8H0U5
Length = 641
Score = 173 (66.0 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 68/264 (25%), Positives = 115/264 (43%)
Query: 67 SCVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG 126
S V++ + S + V V GA G+ G ++L + + R VR S Q+ G
Sbjct: 66 SVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLG--FRVRAGVR---SAQRAGS 120
Query: 127 ADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKG---------GRPEFYF 177
+ +++ N+ Q ++ L I+ + K K PA G G E
Sbjct: 121 LVQS-VKEMKLQNTD-EGTQPVEKLEIVECDLEK-KDSIQPALGNASVIICCIGASEKEI 177
Query: 178 EEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGN-GNILVWKRKA 236
+ P ++D++ KN +DAA +A +LV S+G P L +L WKRKA
Sbjct: 178 SDITGPYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKA 237
Query: 237 EQYLADSGIPYTIIRAGGLQDKEGGIRE---LLVGKDDELLQTETRTIARADVAEVCIQA 293
E+ L +SG+ Y I+R GG++ +E L + DD L + ++ VAE+
Sbjct: 238 EEALIESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQ---VSNLQVAELLACM 294
Query: 294 LQFEEAKF-KAFDLASKPEGTGTP 316
+ + F K ++ ++ TP
Sbjct: 295 AKNPQLSFSKIVEVVAETTAPLTP 318
>SGD|S000004696 [details] [associations]
symbol:YMR090W "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0003674
"molecular_function" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016040 SGD:S000004696
GO:GO:0005737 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:BK006946
EMBL:Z49259 eggNOG:COG0702 OMA:NFRAVEL HOGENOM:HOG000262434
OrthoDB:EOG4XPTRD PIR:S54466 RefSeq:NP_013808.1
ProteinModelPortal:Q04304 SMR:Q04304 DIP:DIP-4443N MINT:MINT-480175
STRING:Q04304 UCD-2DPAGE:Q04304 PaxDb:Q04304 PeptideAtlas:Q04304
EnsemblFungi:YMR090W GeneID:855115 KEGG:sce:YMR090W CYGD:YMR090w
NextBio:978458 Genevestigator:Q04304 GermOnline:YMR090W
Uniprot:Q04304
Length = 227
Score = 124 (48.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 57/226 (25%), Positives = 100/226 (44%)
Query: 80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ--KIGGADDLFIGDIRD 137
M+ V V GA G+ G+++ +LK +VRT++ K D + DI
Sbjct: 1 MSPMKVAVVGASGKVGRLLINQLKANDSFSTPLAIVRTQDQVNYFKNEVGVDASLTDIE- 59
Query: 138 SNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA 197
N+ + I DA+ + V F GG+ E + +D G ++A
Sbjct: 60 -NASVSEIT--DAIKAYDAVV------FSAGAGGKGM----ERIFTVDLD--GCIKVVEA 104
Query: 198 AKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQD 257
+ AG K+ V+V ++ + + N G + KR A++ + +S + YTI++ G L+
Sbjct: 105 CEKAGIKRFVVVSALKAEDRDFWYNIKGLREYYIAKRSADREVRNSNLDYTILQPGSLEL 164
Query: 258 KEG-GIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFK 302
+G G+ + L K +E +I R DVA +++L A K
Sbjct: 165 NKGTGLLQPL-DKLEEKASVNY-SINREDVASFIVESLLHPNATVK 208
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 331 304 0.00098 115 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 601 (64 KB)
Total size of DFA: 186 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.43u 0.10s 23.53t Elapsed: 00:00:01
Total cpu time: 23.43u 0.10s 23.53t Elapsed: 00:00:01
Start: Sat May 11 05:43:08 2013 End: Sat May 11 05:43:09 2013