BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046297
(331 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis
thaliana GN=At2g37660 PE=1 SV=2
Length = 325
Score = 467 bits (1201), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/310 (75%), Positives = 262/310 (84%), Gaps = 9/310 (2%)
Query: 25 KCRQVASSIPFLNSLPEFSSHAFHARSSPSSLTSLPRT---RYRRSCVSKTEAVKVLSMA 81
K VASS S+P SS F + S S+ P + RR V+ + A +
Sbjct: 22 KSGAVASS---FVSVPRSSSLQFRSLVSDSTSICGPSKFTGKNRRVSVTVSAAATTEPL- 77
Query: 82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSI 141
TVLVTGAGGRTGQIVYKKLKERSEQ+ ARGLVRT+ESK+KI G D++FIGDIRD+ SI
Sbjct: 78 --TVLVTGAGGRTGQIVYKKLKERSEQFVARGLVRTKESKEKINGEDEVFIGDIRDTASI 135
Query: 142 IPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA 201
PA++GIDAL+ILTSAVP+MKP FDP+KGGRPEF+F++GAYPEQVDWIGQKNQIDAAKAA
Sbjct: 136 APAVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAA 195
Query: 202 GAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGG 261
G KQIVLVGSMGGTN+NHPLNS+GN NILVWKRKAEQYLADSGIPYTIIRAGGLQDK+GG
Sbjct: 196 GVKQIVLVGSMGGTNINHPLNSIGNANILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGG 255
Query: 262 IRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFK 321
IRELLVGKDDELL+TETRTIARADVAEVC+QALQ EEAKFKA DLASKPEGTGTPTKDFK
Sbjct: 256 IRELLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPEGTGTPTKDFK 315
Query: 322 ALFSQITTRF 331
ALF+Q+TT+F
Sbjct: 316 ALFTQVTTKF 325
>sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana
GN=At5g02240 PE=1 SV=1
Length = 253
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/248 (81%), Positives = 222/248 (89%)
Query: 84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIP 143
TVLVTGA GRTGQIVYKKLKE S+++ A+GLVR+ + K+KIGG D+FIGDI D++SI P
Sbjct: 6 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP 65
Query: 144 AIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA 203
A QGIDAL+ILTSAVPKMKP FDP KGGRPEF FE+G YPEQVDWIGQKNQIDAAK AG
Sbjct: 66 AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV 125
Query: 204 KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIR 263
K IV+VGSMGGTN +HPLN LGNGNILVWKRKAEQYLADSG PYTIIRAGGL DKEGG+R
Sbjct: 126 KHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR 185
Query: 264 ELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKAL 323
ELLVGKDDELLQT+T+T+ RADVAEVCIQAL FEEAK KAFDL SKPEGT TPTKDFKAL
Sbjct: 186 ELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKAL 245
Query: 324 FSQITTRF 331
FSQ+T+RF
Sbjct: 246 FSQVTSRF 253
>sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis
thaliana GN=At2g34460 PE=1 SV=1
Length = 280
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 36/254 (14%)
Query: 85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADD----LFIGDIRDSNS 140
V V GA G+TG+ + ++L R +A + VR E K K DD + D+ +
Sbjct: 49 VFVAGATGQTGKRIVEQLLSRG--FAVKAGVRDVE-KAKTSFKDDPSLQIVRADVTEGPD 105
Query: 141 IIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA 200
+ + G D+ ++ A G RP F + P +VD G N +DA +
Sbjct: 106 KLAEVIGDDSQAVIC------------ATGFRPGF---DIFTPWKVDNFGTVNLVDACRK 150
Query: 201 AGAKQIVLVGSM--GGTNLNHPLNS---LGN--GNILVWKRKAEQYLADSGIPYTIIRAG 253
G ++ VLV S+ G + LN N G LV K +AE+Y+ SGI YTI+R G
Sbjct: 151 QGVEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPG 210
Query: 254 GLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGT 313
GL++ + +++ +D L + +I+R VAEV ++AL EE+ FK ++ ++ E
Sbjct: 211 GLKN-DPPTGNVVMEPEDTLYEG---SISRDLVAEVAVEALLQEESSFKVVEIVARAEA- 265
Query: 314 GTPTKDFKALFSQI 327
P + +K LF+ +
Sbjct: 266 --PKRSYKDLFASV 277
>sp|Q8H0U5|TIC62_ARATH Protein TIC 62, chloroplastic OS=Arabidopsis thaliana GN=TIC62 PE=1
SV=1
Length = 641
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 95/229 (41%), Gaps = 37/229 (16%)
Query: 67 SCVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKE---------RSEQYAAR----- 112
S V++ + S + V V GA G+ G ++L + RS Q A
Sbjct: 66 SVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSV 125
Query: 113 ---GLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAK 169
L T+E Q + + + D+ +SI PA+ +I A K D
Sbjct: 126 KEMKLQNTDEGTQPVEKLE-IVECDLEKKDSIQPALGNASVIICCIGASEKEISDIT--- 181
Query: 170 GGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLG-NGN 228
G Y ++D++ KN +DAA +A +LV S+G P L
Sbjct: 182 ----------GPY--RIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWG 229
Query: 229 ILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRE---LLVGKDDELL 274
+L WKRKAE+ L +SG+ Y I+R GG++ +E L + DD L
Sbjct: 230 VLCWKRKAEEALIESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLF 278
>sp|P49534|YCF39_ODOSI Uncharacterized protein ycf39 OS=Odontella sinensis GN=ycf39 PE=3
SV=1
Length = 319
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 105/233 (45%), Gaps = 42/233 (18%)
Query: 84 TVLVTGAGGRTG-QIVYKKLKERSEQYAARGLVRT--EESKQKIGGADDLFIGDIRDSNS 140
++L+ G G G Q+V + L ++ Y R LVR + + K GA+ L GD+ +
Sbjct: 2 SLLIIGGTGTLGRQVVLQAL---TKGYQVRCLVRNFRKANFLKEWGAE-LIYGDLSRPET 57
Query: 141 IIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA 200
I P +QGI A+I +++ P D D K QVDW G+ I+AA+A
Sbjct: 58 IPPCLQGITAVIDTSTSRPS---DLDTLK---------------QVDWDGKCALIEAAQA 99
Query: 201 AGAKQIVLVGSMGGTN-LNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKE 259
A K V S LN PL + G E L S IPYT+ R G +
Sbjct: 100 ANVKHFVFCSSQNVEQFLNIPLMEMKFG--------IETKLQQSNIPYTVFRLAGF--YQ 149
Query: 260 GGIRE--LLVGKDDELLQTETRTIAR----ADVAEVCIQALQFEEAKFKAFDL 306
G I + + V ++ +L T T D+A+ C+++LQ E K + F L
Sbjct: 150 GLIEQYAIPVLENLPILVTNENTCVSYMDTQDIAKFCLRSLQLPETKNRTFVL 202
>sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2
Length = 534
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 183 PEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLG-NGNILVWKRKAEQYLA 241
P ++D+ KN +DAA A +LV S+G P L +L+WKRKAE+ L
Sbjct: 190 PCRIDYRATKNLVDAATVAKVNHFILVTSLGTNKFGLPAAILNLFWGVLIWKRKAEEALL 249
Query: 242 DSGIPYTIIRAGGLQDKEGGIRE 264
SGIPYTI+R GG++ +E
Sbjct: 250 ASGIPYTIVRPGGMERPTDAYKE 272
>sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3
SV=1
Length = 321
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 103/232 (44%), Gaps = 38/232 (16%)
Query: 84 TVLVTGAGGRTG-QIVYKKLKERSEQYAARGLVRT--EESKQKIGGADDLFIGDIRDSNS 140
++LV GA G G QIV L E Y R LVR + + K GA L GD+ S
Sbjct: 2 SILVIGATGTLGRQIVRSAL---DEGYQVRCLVRNLRKAAFLKEWGAK-LIWGDLSQPES 57
Query: 141 IIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA 200
++PA+ GI +I +++ P DPA G Y QVD G+K IDAAKA
Sbjct: 58 LLPALTGIRVIIDTSTSRPT-----DPA-----------GVY--QVDLKGKKALIDAAKA 99
Query: 201 AGAKQIVLVGSMGGTNLNH-PLNSLGNGNILVWKRKAEQYLADSGIPYTIIR-AGGLQDK 258
++ + + + PL + K E+ L +SG+ YTI + G Q
Sbjct: 100 MKIEKFIFFSILNSEKYSQVPLMRI--------KTVTEELLKESGLNYTIFKLCGFFQGL 151
Query: 259 EGGIRELLVGKDDELLQTETRTIARA---DVAEVCIQALQFEEAKFKAFDLA 307
G ++ + + TE+ +IA D+A +++L +E + F L
Sbjct: 152 IGQYAVPILDQQTVWITTESTSIAYMDTIDIARFTLRSLVLKETNNRVFPLV 203
>sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1
Length = 344
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 75 VKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI------GGAD 128
V V S A TV VTGAGG + K L ER Y +G VR + + GG +
Sbjct: 3 VDVASPAGKTVCVTGAGGYIASWIVKILLERG--YTVKGTVRNPDDPKNTHLRELEGGKE 60
Query: 129 DLFI--GDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQV 186
L + D++D ++ AI G D + S V DP + P
Sbjct: 61 RLILCKADLQDYEALKAAIDGCDGVFHTASPVTD-----DPEQMVEPAVN---------- 105
Query: 187 DWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLN 218
G K I+AA A K++V+ S+G ++
Sbjct: 106 ---GAKFVINAAAEAKVKRVVITSSIGAVYMD 134
>sp|O07609|YHFK_BACSU Uncharacterized sugar epimerase YhfK OS=Bacillus subtilis (strain
168) GN=yhfK PE=2 SV=1
Length = 214
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 101/226 (44%), Gaps = 32/226 (14%)
Query: 85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--GGADDLFIGDIRDSNSII 142
V + GA G+ GQ + ++ + ++ R +VR EE K + GA+ + I
Sbjct: 3 VFLIGANGQIGQRLVSLFQDNPD-HSIRAMVRKEEQKASLEAAGAEAVLANLEGSPEEIA 61
Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQ--VDWIGQKNQIDAAKA 200
A +G DA+I F GG Y + VD G I+AA
Sbjct: 62 AAAKGCDAII------------FTAGSGGST-------GYDKTLLVDLDGAAKAIEAAAI 102
Query: 201 AGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEG 260
AG K+ ++V ++ N + +L V K A++ L SG+ YTIIR GGL++ E
Sbjct: 103 AGIKRFIMVSALQAHNRENWNEALKP--YYVAKHYADKILEASGLTYTIIRPGGLRN-EP 159
Query: 261 GIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDL 306
G + KD E I+R DVA+ I +L + + +AFDL
Sbjct: 160 GTGTVSAAKD-----LERGFISRDDVAKTVIASLDEKNTENRAFDL 200
>sp|P51238|YCF39_PORPU Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3
SV=1
Length = 319
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 77/175 (44%), Gaps = 32/175 (18%)
Query: 84 TVLVTGAGGRTG-QIVYKKLKERSEQYAARGLVRT--EESKQKIGGADDLFIGDIRDSNS 140
T+LV GA G G QIV + L E Y + +VR + + K GA+ L GD++ S
Sbjct: 2 TLLVIGATGTLGRQIVRRAL---DEGYNVKCMVRNLRKSAFLKEWGAE-LVYGDLKLPES 57
Query: 141 IIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA 200
I+ + G+ A+I +++ P DP EQ+D G+ I+AAKA
Sbjct: 58 ILQSFCGVTAVIDASTSRPS-----DPYN-------------TEQIDLDGKIALIEAAKA 99
Query: 201 AGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGL 255
A ++ + + +P L N K + YL S I YT+ GG
Sbjct: 100 AKVQRFIFFSILNAD--QYPKVPLMN-----LKSQVVNYLQKSSISYTVFSLGGF 147
>sp|Q61694|3BHS5_MOUSE 3 beta-hydroxysteroid dehydrogenase type 5 OS=Mus musculus
GN=Hsd3b5 PE=1 SV=4
Length = 373
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-------EESKQKIGGADDLFI 132
M + LVTGAGG GQ + + L + E R L RT E SK + +
Sbjct: 1 MPGWSCLVTGAGGFLGQRIVRMLVQEEELQEIRALFRTFGRKHEEELSKLQTKAKVRVLK 60
Query: 133 GDIRDSNSIIPAIQGIDALIILTSAV 158
GDI D+ + A QG+ A+I +A+
Sbjct: 61 GDILDAQCLKRACQGMSAVIHTAAAI 86
>sp|Q9SAH9|CCR2_ARATH Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1
Length = 332
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 57/142 (40%), Gaps = 28/142 (19%)
Query: 85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-----EESKQKIGGADD---LFIGDIR 136
V VTGAGG + K L ER Y RG VR +++ GA + L D+
Sbjct: 8 VCVTGAGGYIASWIVKLLLERG--YTVRGTVRNPTDPKNNHLRELQGAKERLTLHSADLL 65
Query: 137 DSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID 196
D ++ I G D + +A P M D PE E G K ID
Sbjct: 66 DYEALCATIDGCDG--VFHTASP-MTDD--------PETMLEPAVN-------GAKFVID 107
Query: 197 AAKAAGAKQIVLVGSMGGTNLN 218
AA A K++V S+G +N
Sbjct: 108 AAAKAKVKRVVFTSSIGAVYMN 129
>sp|Q61767|3BHS4_MOUSE 3 beta-hydroxysteroid dehydrogenase type 4 OS=Mus musculus
GN=Hsd3b4 PE=2 SV=3
Length = 373
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-------EESKQKIGGADDLFI 132
M + LVTGAGG GQ + + L + E R L RT E SK + +
Sbjct: 1 MPGWSCLVTGAGGFLGQRIVRMLVQEEELQEIRALFRTFGRKQEEELSKLQTKTKVTVLK 60
Query: 133 GDIRDSNSIIPAIQGIDALIILTSAV 158
GDI D+ + A QG+ A+I +A+
Sbjct: 61 GDILDAQCLKRACQGMSAVIHTAAAI 86
>sp|P39315|QOR2_ECOLI Quinone oxidoreductase 2 OS=Escherichia coli (strain K12) GN=qorB
PE=1 SV=1
Length = 286
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 44/175 (25%)
Query: 85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFI--GDIRDSNSII 142
+ +TGA G+ G V + L + +VR Q + A + + D D ++
Sbjct: 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA-AQGITVRQADYGDEAALT 60
Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
A+QG++ L++++S+ E G Q +N I+AAKAAG
Sbjct: 61 SALQGVEKLLLISSS--------------------EVGQRAPQ-----HRNVINAAKAAG 95
Query: 203 AKQIVLVGSMGGTNLNH----PLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAG 253
K I T+L H PL L + +I + E+ LADSGI YT++R G
Sbjct: 96 VKFIAY------TSLLHADTSPLG-LADEHI-----ETEKMLADSGIVYTLLRNG 138
>sp|Q15738|NSDHL_HUMAN Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Homo
sapiens GN=NSDHL PE=1 SV=2
Length = 373
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 29/129 (22%)
Query: 87 VTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADD----LFIGDIRDSNSII 142
V G G GQ EQ ARG Q+ G D+ F+GD+ +
Sbjct: 42 VIGGSGFLGQ-------HMVEQLLARGYAVNVFDIQQ--GFDNPQVRFFLGDLCSRQDLY 92
Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
PA++G++ + A P P+ + FY +V++IG KN I+ K AG
Sbjct: 93 PALKGVNT--VFHCASPP------PSSNNKELFY--------RVNYIGTKNVIETCKEAG 136
Query: 203 AKQIVLVGS 211
++++L S
Sbjct: 137 VQKLILTSS 145
>sp|P24815|3BHS1_MOUSE 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1
OS=Mus musculus GN=Hsd3b1 PE=2 SV=3
Length = 373
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-------VRTEESKQKIGGADDLFI 132
MA + LVTGAGG GQ + K L + E R L + E SK + +
Sbjct: 1 MAGWSCLVTGAGGFVGQRIIKMLVQEKELQEVRALDKVFRPETKEEFSKLQTKTKVTVLE 60
Query: 133 GDIRDSNSIIPAIQGIDALIILTSAV 158
GDI D+ + A QGI +++I T+AV
Sbjct: 61 GDILDAQCLRRACQGI-SVVIHTAAV 85
>sp|Q3ZBE9|NSDHL_BOVIN Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Bos
taurus GN=NSDHL PE=2 SV=1
Length = 356
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 37/151 (24%)
Query: 66 RSCVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEESKQKI 124
R+C+++ + AK ++ G G +V EQ ARG V + +Q
Sbjct: 10 RTCLTED-----IPKAKRCTVIGGCGFLGQHMV--------EQLLARGYAVNVFDIRQ-- 54
Query: 125 GGADD----LFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEG 180
G D+ F+GD+ + PA++G+ + A P P + FY
Sbjct: 55 -GFDNPRVQFFLGDLCSQQDLYPALKGVST--VFHCASPP------PFNNNKELFY---- 101
Query: 181 AYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS 211
+V++IG KN I+ K AG ++++L S
Sbjct: 102 ----RVNYIGTKNVIETCKEAGVQKLILTSS 128
>sp|Q9R1J0|NSDHL_MOUSE Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Mus
musculus GN=Nsdhl PE=2 SV=1
Length = 362
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 30/151 (19%)
Query: 65 RRSCVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI 124
+R V+ T +S AK ++ G G GQ + ++L ER V + Q
Sbjct: 10 KRGQVTGTHLTNDISKAKKCTVI-GGSGFLGQHMVEQLLERGYT------VNVFDIHQ-- 60
Query: 125 GGADD----LFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEG 180
G D+ FIGD+ + + PA++G+ + A P P + FY
Sbjct: 61 -GFDNPRVQFFIGDLCNQQDLYPALKGVST--VFHCASPP------PYSNNKELFY---- 107
Query: 181 AYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS 211
+V++IG K I+ + AG ++++L S
Sbjct: 108 ----RVNFIGTKTVIETCREAGVQKLILTSS 134
>sp|Q5PPL3|NSDHL_RAT Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating
OS=Rattus norvegicus GN=Nsdhl PE=2 SV=1
Length = 362
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 32/156 (20%)
Query: 61 RTRYRRSCVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEE 119
R+ ++ V+ T+ + +S AK ++ G+G +V EQ +RG V +
Sbjct: 6 RSESKKGQVTGTDLINEVSKAKKCTVIGGSGFLGQHMV--------EQLLSRGYAVNVFD 57
Query: 120 SKQKIGGADD----LFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEF 175
+Q G D+ FIGD+ + + PA++G+ + A P P+ E
Sbjct: 58 VRQ---GFDNPRVQFFIGDLCNQQDLYPALKGVST--VFHCASP-------PSNSNNKEL 105
Query: 176 YFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS 211
++ +V+ G K I+ K AG ++++L S
Sbjct: 106 FY-------RVNSTGTKTVIETCKEAGVQKLILTSS 134
>sp|O35296|3BHS3_MESAU 3 beta-hydroxysteroid dehydrogenase type 3 OS=Mesocricetus auratus
GN=HSD3B3 PE=2 SV=3
Length = 373
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-------EESKQKIGGADDLFI 132
M + LVTGAGG GQ + + L + E R L R+ E SK + +
Sbjct: 1 MPAWSCLVTGAGGFLGQRIIRMLAQEKELQEVRTLFRSFTPKHREELSKLQTKTKVTVLE 60
Query: 133 GDIRDSNSIIPAIQGIDALIILTSAV 158
GDI D+ + A QGI +I +A+
Sbjct: 61 GDILDAQCLRRACQGISVVIHTAAAI 86
>sp|Q58461|Y1061_METJA Uncharacterized membrane protein MJ1061 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1061 PE=3 SV=1
Length = 333
Score = 39.3 bits (90), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 34/195 (17%)
Query: 84 TVLVTGAGGRTGQIVYKKLKE------RSEQYAARGLVRTEE--SKQKIGGADDLFIGDI 135
T+LVTG G G+ + K L + R L E + +KI FIGD+
Sbjct: 13 TILVTGGTGSIGKEIVKTLLKFNPKTIRVLDINETALFELEHELNSEKI----RCFIGDV 68
Query: 136 RDSNSIIPAIQGIDALIILTSAVPKMKP--DFDPAKGGRPEFYFEEGAYPEQVDWIGQKN 193
RD + + AI+ +D ++ +A K P +++P + + + IG +N
Sbjct: 69 RDKDRLKRAIEEVD--VVFHAAALKHVPLCEYNPFEAVK-------------TNVIGTQN 113
Query: 194 QIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKR--KAEQYLADSGIPYTIIR 251
I+ A ++ + + + N P+N +G +L + A Y ++++R
Sbjct: 114 LIEVAMDEEVEKFITISTDKAVN---PVNVMGATKLLAERLTISANLYKGKRKTAFSVVR 170
Query: 252 AGGLQDKEGGIRELL 266
G + + G I LL
Sbjct: 171 FGNVLNSRGSILPLL 185
>sp|Q1RIM4|CAPD_RICBR UDP-glucose 4-epimerase OS=Rickettsia bellii (strain RML369-C)
GN=capD PE=3 SV=1
Length = 341
Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 84 TVLVTGAGGRTGQIVYKKLKERS---EQYAARGLVRTEESKQKIGGADD-----LFIGDI 135
T+L+TG G G V + + + R R E+ ++ + A + +IGD+
Sbjct: 6 TLLITGGTGSFGNAVLSRFLKNDIIKDIKEIRIFSRDEKKQEDMRIALNNPKIKFYIGDV 65
Query: 136 RDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQI 195
R+ NSI A++G+D + +A K P EFY E + +G +N +
Sbjct: 66 RNYNSIDDAMKGVDY--VFHAAALKQVP--------TCEFYPMEAI---NTNILGAENVL 112
Query: 196 DAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKR---KAEQYLADSGIPYTIIRA 252
AA +++++ + +P+N++G L+ K KA + D + + + R
Sbjct: 113 RAATINKVAKVIVLSTDKAV---YPINAMGLSKALMEKLAIAKARMNVRDKTV-FCVTRY 168
Query: 253 GGLQDKEGGIRELLVG---KDDELLQTE---TR-TIARADVAEVCIQALQF 296
G + G + L + ++ +L TE TR ++ D ++ + A ++
Sbjct: 169 GNVMASRGSVIPLFINQIKQNKDLTITEPSMTRFLMSLVDSVDLVLYAFEY 219
>sp|O25511|PSEB_HELPY UDP-N-acetylglucosamine 4,6-dehydratase (inverting) OS=Helicobacter
pylori (strain ATCC 700392 / 26695) GN=pseB PE=1 SV=1
Length = 333
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQ-----YAARGLVRTEESKQKIGGADDLFIGD 134
+ T+L+TG G G+ +K+ + + Y+ L ++E + + FIGD
Sbjct: 8 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGD 67
Query: 135 IRDSNSIIPAIQGIDALIILTSAVPKMKP--DFDPAKGGRPEFYFEEGAYPEQVDWIGQK 192
+RD + A++G+D I + +A K P +++P + + + +G
Sbjct: 68 VRDLERLNYALEGVD--ICIHAAALKHVPIAEYNPLECIK-------------TNIMGAS 112
Query: 193 NQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKR--KAEQYLADSGIPYTII 250
N I+A Q++ + + N P+N G + K A + S ++++
Sbjct: 113 NVINACLKNAISQVIALSTDKAAN---PINLYGATKLCSDKLFVSANNFKGSSQTQFSVV 169
Query: 251 RAGGLQDKEGGI----RELLVGKDDELLQTETR 279
R G + G + ++L+ K E+ T+ R
Sbjct: 170 RYGNVVGSRGSVVPFFKKLVQNKASEIPITDIR 202
>sp|P22071|3BHS1_RAT 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1
OS=Rattus norvegicus GN=Hsd3b1 PE=2 SV=3
Length = 373
Score = 38.5 bits (88), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-------VRTEESKQKIGGADDLFI 132
M + LVTGAGG GQ + + L + E R L + E SK + +
Sbjct: 1 MPGWSCLVTGAGGFVGQRIIRMLVQEKELQEVRALDKVFRPETKEEFSKLQTKAKVTMLE 60
Query: 133 GDIRDSNSIIPAIQGIDALIILTSAV 158
GDI D+ + A QGI +++I T+AV
Sbjct: 61 GDILDAQYLRRACQGI-SVVIHTAAV 85
>sp|O46516|3BHS_HORSE 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Equus
caballus GN=HSD3B PE=2 SV=3
Length = 373
Score = 38.5 bits (88), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-------VRTEESKQKIGGADDLFI 132
MA + LVTGAGG GQ + + L E E R L +R E SK + +
Sbjct: 1 MAGWSCLVTGAGGFLGQRIVRLLVEEKEVQEIRALDKVFRPELREEFSKLQSKVKLTVLE 60
Query: 133 GDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDP 167
GDI D + A QG A +I T+++ + F+P
Sbjct: 61 GDILDEQFLKRACQGASA-VIHTASIIDVTNLFNP 94
>sp|P27364|3BHS5_RAT 3 beta-hydroxysteroid dehydrogenase type 5 OS=Rattus norvegicus
GN=Hsd3b5 PE=2 SV=3
Length = 373
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-------EESKQKIGGADDLFI 132
M + LVTGAGG GQ + + L + E R L RT E SK + +
Sbjct: 1 MPGWSCLVTGAGGFLGQRIVQMLVQEKELQEVRVLYRTFSPKHKEELSKLQTKAKVTVLR 60
Query: 133 GDIRDSNSIIPAIQGIDALIILTSAV 158
GDI D+ + A QG+ +I +A+
Sbjct: 61 GDIVDAQFLRRACQGMSVIIHTAAAL 86
>sp|P22072|3BHS2_RAT 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2
OS=Rattus norvegicus GN=Hsd3b PE=2 SV=3
Length = 373
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-------VRTEESKQKIGGADDLFI 132
M + LVTGAGG GQ + + L + E R L + E SK + +
Sbjct: 1 MPGWSCLVTGAGGFVGQRIIRMLVQEKELQEVRALDKVFRPETKEEFSKLQTKAKVTMLE 60
Query: 133 GDIRDSNSIIPAIQGIDALIILTSAV 158
GDI D+ + A QGI +++I T++V
Sbjct: 61 GDILDAQYLRRACQGI-SVVIHTASV 85
>sp|Q60555|3BHS1_MESAU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1
OS=Mesocricetus auratus GN=HSD3B1 PE=2 SV=3
Length = 373
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-------VRTEESKQKIGGADDLFI 132
M + LVTGAGG GQ + + L + E R L R E K + +
Sbjct: 1 MPGWSCLVTGAGGFLGQRIIRMLVQEKELQEVRALDKVFRPETREEFCKLQTKTKVTVLE 60
Query: 133 GDIRDSNSIIPAIQGIDALIILTSAV 158
GDI D+ + A QGI +I +A+
Sbjct: 61 GDILDAQCLRRACQGISVVIHTAAAI 86
>sp|Q7V9S8|PANCY_PROMA Bifunctional pantoate ligase/cytidylate kinase OS=Prochlorococcus
marinus (strain SARG / CCMP1375 / SS120) GN=panC/cmk
PE=3 SV=1
Length = 519
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 175 FYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKR 234
Y + GA V W+ Q+N ID ++ + I + NL+ L++ GN +L+ +
Sbjct: 315 IYLDTGAMYRAVTWLIQENNIDPQNSSELELI-----LNDINLDICLSNTGNQQVLINGK 369
Query: 235 KAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDEL-----LQTETRTIARADVAE- 288
+ + + + G +RE L + EL L E R I A +
Sbjct: 370 DITTLIRSPTVTSQVSLVAAI----GSVREKLTSQQKELGSKGGLVAEGRDIGTAVFPDA 425
Query: 289 ---VCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR 330
+ + A E AK +A DL K +G TP+ L QI R
Sbjct: 426 ELKIFLTATAQERAKRRAIDL--KKQGFSTPS--LSELEKQIKER 466
>sp|A8GWP0|CAPD_RICB8 UDP-glucose 4-epimerase OS=Rickettsia bellii (strain OSU 85-389)
GN=capD PE=3 SV=1
Length = 341
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 28/197 (14%)
Query: 84 TVLVTGAGGRTGQIVYKKLKERS---EQYAARGLVRTEESKQKIGGADD-----LFIGDI 135
T+L+TG G G V + + + R R E+ ++ + A + +IGD+
Sbjct: 6 TLLITGGTGSFGNAVLSRFLKNDIIKDIKEIRIFSRDEKKQEDMRIALNNPKIKFYIGDV 65
Query: 136 RDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQI 195
R+ NSI A++ +D + +A K P EFY E + +G +N +
Sbjct: 66 RNYNSIDDAMKDVDY--VFHAAALKQVP--------TCEFYPMEAI---NTNILGAENVL 112
Query: 196 DAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKR---KAEQYLADSGIPYTIIRA 252
AA +++++ + +P+N++G L+ K KA + D + + + R
Sbjct: 113 RAATINKVAKVIVLSTDKAV---YPINAMGLSKALMEKLAIAKARMNVRDKTV-FCVTRY 168
Query: 253 GGLQDKEGGIRELLVGK 269
G + G + L + +
Sbjct: 169 GNVMASRGSVIPLFINQ 185
>sp|B5XZC1|TOLB_KLEP3 Protein TolB OS=Klebsiella pneumoniae (strain 342) GN=tolB PE=3
SV=1
Length = 430
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 159 PKMKPD-----FDPAKGGRPEFYFEE--GAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS 211
P PD F + GRP+ Y G P+++ W G +NQ DA +A K +V+V S
Sbjct: 293 PSWFPDSQNLAFTSDQAGRPQVYKVNINGGTPQRITWEGSQNQ-DADVSADGKTMVMVSS 351
Query: 212 MGG 214
GG
Sbjct: 352 AGG 354
>sp|Q5IFP1|3BHS_CANFA 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Canis
familiaris GN=HSD3B PE=2 SV=3
Length = 373
Score = 35.4 bits (80), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-------VRTEESKQKIGGADDLFI 132
MA + LVTGAGG GQ + L E E R L + E SK + +
Sbjct: 1 MAGWSCLVTGAGGFLGQRIVHLLAEEKELQEIRALDKAFRPELLEEFSKLQSKTKLTMVE 60
Query: 133 GDIRDSNSIIPAIQGIDALIILTSAVPKM 161
GDI D + A QG +I S + M
Sbjct: 61 GDILDEQCLKRACQGTSVVIHTASVIDVM 89
>sp|A4W889|TOLB_ENT38 Protein TolB OS=Enterobacter sp. (strain 638) GN=tolB PE=3 SV=1
Length = 430
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 159 PKMKPD-----FDPAKGGRPEFY--FEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS 211
P PD F + GRP+ Y G P+++ W G +NQ DA ++ K +V+V S
Sbjct: 293 PTWFPDSQNLAFTSDQAGRPQVYKVNVNGGTPQRITWEGSQNQ-DADVSSDGKTMVMVSS 351
Query: 212 MGG 214
GG
Sbjct: 352 AGG 354
>sp|Q5QKR8|PSEB_CAMJJ UDP-N-acetylglucosamine 4,6-dehydratase (inverting)
OS=Campylobacter jejuni subsp. jejuni serotype O:23/36
(strain 81-176) GN=pseB PE=3 SV=1
Length = 334
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 83/209 (39%), Gaps = 31/209 (14%)
Query: 84 TVLVTGAGGRTGQIVYKKLKERSEQ-----YAARGLVRTEESKQKIGGADDLFIGDIRDS 138
+L+TG G G+ K L E + Y+ L + E S FIGD+RD
Sbjct: 6 NILITGGTGSFGKTYTKVLLENYKPNKIIIYSRDELKQFEMSSIFNSNCMRYFIGDVRDK 65
Query: 139 NSIIPAIQGIDALIILTSAVPKMKP--DFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID 196
+ A++ +D ++ +A K P +++P + + + G +N ID
Sbjct: 66 ERLSVAMRDVD--FVIHAAAMKHVPVAEYNPMECIKTNIH-------------GAQNVID 110
Query: 197 AAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKR--KAEQYLADSGIPYTIIRAGG 254
A G K+ + + + N P+N G + K A + +++ R G
Sbjct: 111 ACFENGVKKCIALSTDKACN---PVNLYGATKLASDKLFVAANNIAGNKQTRFSVTRYGN 167
Query: 255 LQDKEGGI----RELLVGKDDELLQTETR 279
+ G + ++L+ EL T+TR
Sbjct: 168 VVGSRGSVVPFFKKLIAQGSKELPITDTR 196
>sp|Q8KU07|AZOB_XENAZ NAD(P)H azoreductase OS=Xenophilus azovorans GN=azoB PE=1 SV=2
Length = 286
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 36/170 (21%)
Query: 85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIP 143
+LV G G G V + L+E + A LVR +++ GD+R+ ++
Sbjct: 2 ILVVGGTGTIGSEVVRLLQEAKLPFKA--LVRDAAKARELNARGVQTAAGDLREPRTLPA 59
Query: 144 AIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA 203
A+ G+D + ++T V P+QV + I AAK AG
Sbjct: 60 ALGGVDKVFVVTPLV------------------------PDQVQM--RAALITAAKTAGV 93
Query: 204 KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAG 253
K V+ +G + P+ I W + +Q + +SG+ +T ++ G
Sbjct: 94 KHFVMSTGIGAAP-DSPV------QIGRWLGENQQQVQESGMAWTFVQPG 136
>sp|C6DCE7|TOLB_PECCP Protein TolB OS=Pectobacterium carotovorum subsp. carotovorum
(strain PC1) GN=tolB PE=3 SV=1
Length = 430
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 169 KGGRPEFY--FEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGG 214
+ GRP+ Y G P+++ W G +NQ DA +A K +V VGS GG
Sbjct: 308 QAGRPQVYKVNANGGAPQRLTWEGAQNQ-DADVSADGKFLVTVGSNGG 354
>sp|P14893|3BHS_BOVIN 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Bos
taurus GN=HSD3B PE=1 SV=2
Length = 373
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-------VRTEESKQKIGGADDLFI 132
MA + LVTG GG GQ + L E + R L VR E SK + L
Sbjct: 1 MAGWSCLVTGGGGFLGQRIICLLVEEKDLQEIRVLDKVFRPEVREEFSKLQSKIKLTLLE 60
Query: 133 GDIRDSNSIIPAIQGIDALIILTSAV 158
GDI D + A QG +I S +
Sbjct: 61 GDILDEQCLKGACQGTSVVIHTASVI 86
>sp|B5ZUE4|PROB_RHILW Glutamate 5-kinase OS=Rhizobium leguminosarum bv. trifolii (strain
WSM2304) GN=proB PE=3 SV=1
Length = 389
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 29/159 (18%)
Query: 142 IPAIQGIDALIILT------SAVPKMKPD---FDPAKGGRPEFYFEEGAYPEQVDWIGQK 192
+ + G D L++L+ +A P + P+ + PE G ++ G +
Sbjct: 162 VATMTGADLLVLLSDIDGLYTAPPHLDPNATFLETISEITPEIEAMAGGAASELSRGGMR 221
Query: 193 NQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIR- 251
+IDA K A ++ + G T + PL+++ NG W A SG P T +
Sbjct: 222 TKIDAGKIATTSGCAMIIASGKT--DSPLSAIENGARSSW-------FAPSGTPVTARKT 272
Query: 252 --------AGGLQDKEGGIRELLVGKDDELLQTETRTIA 282
AGGL +G + L GK LL R+I+
Sbjct: 273 WIAGQLQPAGGLHVDDGAVTALGAGK--SLLPAGVRSIS 309
>sp|Q0P8W4|PSEB_CAMJE UDP-N-acetylglucosamine 4,6-dehydratase (inverting)
OS=Campylobacter jejuni subsp. jejuni serotype O:2
(strain NCTC 11168) GN=pseB PE=1 SV=1
Length = 334
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 25/151 (16%)
Query: 82 KSTVLVTGAGGRTGQIVYKKLKERSEQ-----YAARGLVRTEESKQKIGGADDLFIGDIR 136
K +L+TG G G+ K L E + Y+ L + E + FIGD+R
Sbjct: 4 KKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSRDELKQFEMASVFNAPCMRYFIGDVR 63
Query: 137 DSNSIIPAIQGIDALIILTSAVPKMKP--DFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQ 194
D + A++ +D ++ +A K P +++P + + + G +N
Sbjct: 64 DKERLSAAMRDVD--FVIHAAAMKHVPIAEYNPMECIKTNIH-------------GAQNV 108
Query: 195 IDAAKAAGAKQIVLVGSMGGTNLNHPLNSLG 225
IDA G K+ + + + N P+N G
Sbjct: 109 IDACFENGVKKCIALSTDKACN---PVNLYG 136
>sp|P36886|PSAK_HORVU Photosystem I reaction center subunit psaK, chloroplastic
OS=Hordeum vulgare GN=PSAK PE=1 SV=1
Length = 131
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 29 VASSIPFLNSLPEFSSHAFHARSSPSSLTSLPRTRYRRS 67
+AS + + S+P+F H SSP S+ +LP R RRS
Sbjct: 1 MASQLSAMTSVPQF--HGLRTYSSPRSMATLPSLRRRRS 37
>sp|B2FMS2|SYV_STRMK Valine--tRNA ligase OS=Stenotrophomonas maltophilia (strain K279a)
GN=valS PE=3 SV=1
Length = 942
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 29 VASSIPFLNSLPEFSSHAFHARSSPSSLTSLPRTRYRRSCVSKTEAVKVLSMAKSTVLVT 88
V S+P +N F+ A ++P L R R++ +++ E + +L K+ L
Sbjct: 306 VRHSLPMINL---FTPVAALNENAPERFQGLDRYAARKAVLAELEDLGILVETKAHKLQV 362
Query: 89 GAGGRTGQIVYKKLKE----RSEQYAARGLVRTEE 119
G RTGQ++ L + + + A RGL E+
Sbjct: 363 PRGDRTGQVIEPYLTDQWFVKMDDLAKRGLELVED 397
>sp|B4SJ70|SYV_STRM5 Valine--tRNA ligase OS=Stenotrophomonas maltophilia (strain R551-3)
GN=valS PE=3 SV=1
Length = 942
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 29 VASSIPFLNSLPEFSSHAFHARSSPSSLTSLPRTRYRRSCVSKTEAVKVLSMAKSTVLVT 88
V S+P +N F+ A ++P L R R++ +++ E + +L K+ L
Sbjct: 306 VRHSLPMINL---FTPVAALNENAPERFQGLDRYAARKAVLAELEDLGILVETKAHKLQV 362
Query: 89 GAGGRTGQIVYKKLKE----RSEQYAARGLVRTEE 119
G RTGQ++ L + + + A RGL E+
Sbjct: 363 PRGDRTGQVIEPYLTDQWFVKMDDLAKRGLELVED 397
>sp|B1JG47|TOLB_YERPY Protein TolB OS=Yersinia pseudotuberculosis serotype O:3 (strain
YPIII) GN=tolB PE=3 SV=1
Length = 430
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 159 PKMKPD-----FDPAKGGRPEFYFEE--GAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS 211
P PD + +GGRP+ Y G P+++ W G +NQ +A + K +VLV S
Sbjct: 293 PSWFPDSQNLAYTSDQGGRPQVYKVNINGGVPQRITWEGSQNQ-NADVSPDGKFLVLVSS 351
Query: 212 MGG 214
GG
Sbjct: 352 NGG 354
>sp|Q66D90|TOLB_YERPS Protein TolB OS=Yersinia pseudotuberculosis serotype I (strain
IP32953) GN=tolB PE=3 SV=1
Length = 430
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 159 PKMKPD-----FDPAKGGRPEFYFEE--GAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS 211
P PD + +GGRP+ Y G P+++ W G +NQ +A + K +VLV S
Sbjct: 293 PSWFPDSQNLAYTSDQGGRPQVYKVNINGGVPQRITWEGSQNQ-NADVSPDGKFLVLVSS 351
Query: 212 MGG 214
GG
Sbjct: 352 NGG 354
>sp|A4TNS8|TOLB_YERPP Protein TolB OS=Yersinia pestis (strain Pestoides F) GN=tolB PE=3
SV=1
Length = 430
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 159 PKMKPD-----FDPAKGGRPEFYFEE--GAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS 211
P PD + +GGRP+ Y G P+++ W G +NQ +A + K +VLV S
Sbjct: 293 PSWFPDSQNLAYTSDQGGRPQVYKVNINGGVPQRITWEGSQNQ-NADVSPDGKFLVLVSS 351
Query: 212 MGG 214
GG
Sbjct: 352 NGG 354
>sp|Q1CFM9|TOLB_YERPN Protein TolB OS=Yersinia pestis bv. Antiqua (strain Nepal516)
GN=tolB PE=3 SV=1
Length = 430
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 159 PKMKPD-----FDPAKGGRPEFYFEE--GAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS 211
P PD + +GGRP+ Y G P+++ W G +NQ +A + K +VLV S
Sbjct: 293 PSWFPDSQNLAYTSDQGGRPQVYKVNINGGVPQRITWEGSQNQ-NADVSPDGKFLVLVSS 351
Query: 212 MGG 214
GG
Sbjct: 352 NGG 354
>sp|A9R2G2|TOLB_YERPG Protein TolB OS=Yersinia pestis bv. Antiqua (strain Angola) GN=tolB
PE=3 SV=1
Length = 430
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 159 PKMKPD-----FDPAKGGRPEFYFEE--GAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS 211
P PD + +GGRP+ Y G P+++ W G +NQ +A + K +VLV S
Sbjct: 293 PSWFPDSQNLAYTSDQGGRPQVYKVNINGGVPQRITWEGSQNQ-NADVSPDGKFLVLVSS 351
Query: 212 MGG 214
GG
Sbjct: 352 NGG 354
>sp|Q8ZGZ1|TOLB_YERPE Protein TolB OS=Yersinia pestis GN=tolB PE=3 SV=1
Length = 430
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 159 PKMKPD-----FDPAKGGRPEFYFEE--GAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS 211
P PD + +GGRP+ Y G P+++ W G +NQ +A + K +VLV S
Sbjct: 293 PSWFPDSQNLAYTSDQGGRPQVYKVNINGGVPQRITWEGSQNQ-NADVSPDGKFLVLVSS 351
Query: 212 MGG 214
GG
Sbjct: 352 NGG 354
>sp|B2K8G1|TOLB_YERPB Protein TolB OS=Yersinia pseudotuberculosis serotype IB (strain
PB1/+) GN=tolB PE=3 SV=1
Length = 430
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 159 PKMKPD-----FDPAKGGRPEFYFEE--GAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS 211
P PD + +GGRP+ Y G P+++ W G +NQ +A + K +VLV S
Sbjct: 293 PSWFPDSQNLAYTSDQGGRPQVYKVNINGGVPQRITWEGSQNQ-NADVSPDGKFLVLVSS 351
Query: 212 MGG 214
GG
Sbjct: 352 NGG 354
>sp|Q1CAF2|TOLB_YERPA Protein TolB OS=Yersinia pestis bv. Antiqua (strain Antiqua)
GN=tolB PE=3 SV=1
Length = 430
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 159 PKMKPD-----FDPAKGGRPEFYFEE--GAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS 211
P PD + +GGRP+ Y G P+++ W G +NQ +A + K +VLV S
Sbjct: 293 PSWFPDSQNLAYTSDQGGRPQVYKVNINGGVPQRITWEGSQNQ-NADVSPDGKFLVLVSS 351
Query: 212 MGG 214
GG
Sbjct: 352 NGG 354
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,799,716
Number of Sequences: 539616
Number of extensions: 5070771
Number of successful extensions: 14486
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 14457
Number of HSP's gapped (non-prelim): 93
length of query: 331
length of database: 191,569,459
effective HSP length: 118
effective length of query: 213
effective length of database: 127,894,771
effective search space: 27241586223
effective search space used: 27241586223
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)