BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046300
(302 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PE6|A Chain A, Crystal Structure Of A Soluble Form Of Human Mgll In
Complex With An Inhibitor
Length = 303
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 148/296 (50%), Gaps = 9/296 (3%)
Query: 6 ESVRYEE-DFTENSRGLKLFTCRWLPINQEPKALIFICHGYAMECSITMDSTATRLVNVG 64
+S+ Y++ N+ G LF W P PKALIF+ HG A E S + A L+ +
Sbjct: 12 QSIPYQDLPHLVNADGQYLFCRYWAPTGT-PKALIFVSHG-AGEHSGRYEELARMLMGLD 69
Query: 65 YAVYGMDCEGHGKSDGLQAYIENFQNLVDDYDNHFTSICERGENKGKMKFLLGESMGGAM 124
V+ D GHG+S+G + + +F V D H S+ + + G FLLG SMGGA+
Sbjct: 70 LLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSM--QKDYPGLPVFLLGHSMGGAI 127
Query: 125 ALLLHRKKPDYWSGAILAAPMCKIANDMKPHPVMISILSTLCKWLPKWKAIKGQDIIEIA 184
A+L ++P +++G +L +P+ +AN + L LP + G +
Sbjct: 128 AILTAAERPGHFAGMVLISPLV-LANPESATTFKVLAAKVLNSVLPNLSS--GPIDSSVL 184
Query: 185 FKEAAVREQVRANKYCYKGPPRMKTGYELFRISLDLEKRLQEVSLPFLVLHGEQDKVTDQ 244
+ + ++ + ++ G +L +E+ L ++++PFL+L G D++ D
Sbjct: 185 SRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDS 244
Query: 245 SASKELFEVASSKDKDLKLYPGMWHGLLYGEPLENINIVFRDIINWLDKRVSSGNS 300
+ L E+A S+DK LK+Y G +H +L+ E E N VF +I W+ +R ++ +
Sbjct: 245 KGAYLLMELAKSQDKTLKIYEGAYH-VLHKELPEVTNSVFHEINMWVSQRTATAGT 299
>pdb|3JWE|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase In
Complex With Sar629
pdb|3JWE|B Chain B, Crystal Structure Of Human Mono-Glyceride Lipase In
Complex With Sar629
Length = 320
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 151/303 (49%), Gaps = 23/303 (7%)
Query: 6 ESVRYEE-DFTENSRGLKLFTCRWLPINQEPKALIFICHGYAMECSITMDSTATRLVNVG 64
+S+ Y++ N+ G LF CR+ PKALIF+ HG A E S + A L+ +
Sbjct: 29 QSIPYQDLPHLVNADGQYLF-CRYWKPTGTPKALIFVSHG-AGEHSGRYEELARMLMGLD 86
Query: 65 YAVYGMDCEGHGKSDGLQAYIENFQNLVDDYDNHFTSICERGENKGKMKFLLGESMGGAM 124
V+ D GHG+S+G + + +F V D H S+ + + G FLLG SMGGA+
Sbjct: 87 LLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSM--QKDYPGLPVFLLGHSMGGAI 144
Query: 125 ALLLHRKKPDYWSGAILAAPMCKIANDMKPHPVMISILSTLCKWLPKWKAIKGQDIIEIA 184
A+L ++P +++G +L +P+ +AN + L LP + +
Sbjct: 145 AILTAAERPGHFAGMVLISPLV-LANPESATTFKVLAAKVLNLVLPN---------LSLG 194
Query: 185 FKEAAVREQVRANKYCYKGPP-------RMKTGYELFRISLDLEKRLQEVSLPFLVLHGE 237
+++V + + Y P ++ G +L +E+ L ++++PFL+L G
Sbjct: 195 PIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGS 254
Query: 238 QDKVTDQSASKELFEVASSKDKDLKLYPGMWHGLLYGEPLENINIVFRDIINWLDKRVSS 297
D++ D + L E+A S+DK LK+Y G +H +L+ E E N VF +I W+ +R ++
Sbjct: 255 ADRLCDSKGAYLLMELAKSQDKTLKIYEGAYH-VLHKELPEVTNSVFHEINMWVSQRTAT 313
Query: 298 GNS 300
+
Sbjct: 314 AGT 316
>pdb|3HJU|A Chain A, Crystal Structure Of Human Monoglyceride Lipase
pdb|3HJU|B Chain B, Crystal Structure Of Human Monoglyceride Lipase
Length = 342
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 151/303 (49%), Gaps = 23/303 (7%)
Query: 6 ESVRYEE-DFTENSRGLKLFTCRWLPINQEPKALIFICHGYAMECSITMDSTATRLVNVG 64
+S+ Y++ N+ G LF CR+ PKALIF+ HG A E S + A L+ +
Sbjct: 30 QSIPYQDLPHLVNADGQYLF-CRYWKPTGTPKALIFVSHG-AGEHSGRYEELARMLMGLD 87
Query: 65 YAVYGMDCEGHGKSDGLQAYIENFQNLVDDYDNHFTSICERGENKGKMKFLLGESMGGAM 124
V+ D GHG+S+G + + +F V D H S+ + + G FLLG SMGGA+
Sbjct: 88 LLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSM--QKDYPGLPVFLLGHSMGGAI 145
Query: 125 ALLLHRKKPDYWSGAILAAPMCKIANDMKPHPVMISILSTLCKWLPKWKAIKGQDIIEIA 184
A+L ++P +++G +L +P+ +AN + L LP + +
Sbjct: 146 AILTAAERPGHFAGMVLISPLV-LANPESATTFKVLAAKVLNLVLPN---------LSLG 195
Query: 185 FKEAAVREQVRANKYCYKGPP-------RMKTGYELFRISLDLEKRLQEVSLPFLVLHGE 237
+++V + + Y P ++ G +L +E+ L ++++PFL+L G
Sbjct: 196 PIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGS 255
Query: 238 QDKVTDQSASKELFEVASSKDKDLKLYPGMWHGLLYGEPLENINIVFRDIINWLDKRVSS 297
D++ D + L E+A S+DK LK+Y G +H +L+ E E N VF +I W+ +R ++
Sbjct: 256 ADRLCDSKGAYLLMELAKSQDKTLKIYEGAYH-VLHKELPEVTNSVFHEINMWVSQRTAT 314
Query: 298 GNS 300
+
Sbjct: 315 AGT 317
>pdb|3JW8|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase
pdb|3JW8|B Chain B, Crystal Structure Of Human Mono-Glyceride Lipase
Length = 320
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 148/303 (48%), Gaps = 23/303 (7%)
Query: 6 ESVRYEE-DFTENSRGLKLFTCRWLPINQEPKALIFICHGYAMECSITMDSTATRLVNVG 64
+S+ Y++ N+ G LF CR+ PKALIF+ HG A E S + A L +
Sbjct: 29 QSIPYQDLPHLVNADGQYLF-CRYWKPTGTPKALIFVSHG-AGEHSGRYEELARXLXGLD 86
Query: 65 YAVYGMDCEGHGKSDGLQAYIENFQNLVDDYDNHFTSICERGENKGKMKFLLGESMGGAM 124
V+ D GHG+S+G + + +F V D H S + + G FLLG S GGA+
Sbjct: 87 LLVFAHDHVGHGQSEGERXVVSDFHVFVRDVLQHVDS--XQKDYPGLPVFLLGHSXGGAI 144
Query: 125 ALLLHRKKPDYWSGAILAAPMCKIANDMKPHPVMISILSTLCKWLPKWKAIKGQDIIEIA 184
A+L ++P +++G +L +P+ +AN + L LP + +
Sbjct: 145 AILTAAERPGHFAGXVLISPLV-LANPESATTFKVLAAKVLNLVLPN---------LSLG 194
Query: 185 FKEAAVREQVRANKYCYKGPP-------RMKTGYELFRISLDLEKRLQEVSLPFLVLHGE 237
+++V + + Y P ++ G +L +E+ L ++++PFL+L G
Sbjct: 195 PIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGS 254
Query: 238 QDKVTDQSASKELFEVASSKDKDLKLYPGMWHGLLYGEPLENINIVFRDIINWLDKRVSS 297
D++ D + L E+A S+DK LK+Y G +H +L+ E E N VF +I W+ +R ++
Sbjct: 255 ADRLCDSKGAYLLXELAKSQDKTLKIYEGAYH-VLHKELPEVTNSVFHEINXWVSQRTAT 313
Query: 298 GNS 300
+
Sbjct: 314 AGT 316
>pdb|1A88|A Chain A, Chloroperoxidase L
pdb|1A88|B Chain B, Chloroperoxidase L
pdb|1A88|C Chain C, Chloroperoxidase L
Length = 275
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 108/274 (39%), Gaps = 30/274 (10%)
Query: 17 NSRGLKLFTCRWLPINQEPKALIFICHGYAMECSITMDSTATRLVNVGYAVYGMDCEGHG 76
S G +F W P + P + HG+ + D+ ++ GY V D GHG
Sbjct: 5 TSDGTNIFYKDWGPRDGLP---VVFHHGWPLSAD-DWDNQMLFFLSHGYRVIAHDRRGHG 60
Query: 77 KSDGLQAYIENFQNLVDDYDNHFTSICERGENKGKMKFLLGESMGGA-MALLLHRKKPDY 135
+SD + + +D Y ++ E + +G + +G S GG +A + R +P
Sbjct: 61 RSDQ-----PSTGHDMDTYAADVAALTEALDLRGAVH--IGHSTGGGEVARYVARAEPGR 113
Query: 136 WSGAIL--AAPMCKIANDMKPHPVMISILSTLCKWLPKWKAIKGQDIIEIAF----KEAA 189
+ A+L A P + +D P + + + L +A D+ F +E A
Sbjct: 114 VAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGA 173
Query: 190 VREQVRANKYCYKG-PPRMKTGYELFRI--SLDLEKRLQEVSLPFLVLHGEQDKVTDQS- 245
Q + + +G YE D L+ + +P LV HG D+V +
Sbjct: 174 TVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYAD 233
Query: 246 ---ASKELFEVASSKDKDLKLYPGMWHGLLYGEP 276
S EL A+ LK Y G+ HG+L P
Sbjct: 234 AAPKSAELLANAT-----LKSYEGLPHGMLSTHP 262
>pdb|4DGQ|A Chain A, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|B Chain B, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|C Chain C, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
Length = 280
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 112/282 (39%), Gaps = 26/282 (9%)
Query: 20 GLKLFTCRWLPINQEPKALIFICHGYAMECSITMDSTATRLVNVGYAVYGMDCEGHGKSD 79
G+++F W P + + +I HG+ + S D+ VN G+ V D GHG+S
Sbjct: 13 GVEIFYKDWGPRDAK---VIHFHHGWPL-SSDDWDAQLLFFVNKGFRVVAHDRRGHGRS- 67
Query: 80 GLQAYIENFQNLVDDYDNHFTSICERGENKGKMKFLLGESMGGA-MALLLHRKKPDYWSG 138
+ + + ++ D Y + ++ E+ G M +G S GG + + R S
Sbjct: 68 ---SQVWDGHDM-DHYADDAAAVVEKLGTHGAMH--VGHSTGGGEVVRYIARHGERNVSK 121
Query: 139 AIL--AAPMCKIANDMKPHPVMISILSTLCKWLPKWKAIKGQDIIEIAF-----KEAAVR 191
A+L + P + P+ S+ + +A D+ F A
Sbjct: 122 AVLISSVPPLMVKTSSNPNGTPKSVFDDFQAHVAANRAQFYLDVPAGPFYGYNRPGAKPS 181
Query: 192 EQVRANKYCYKGPPRMKTGYE--LFRISLDLEKRLQEVSLPFLVLHGEQDKVTDQSASKE 249
E V N + K Y+ + D L+ +++P LV+HG+ D+V A
Sbjct: 182 EGVIYNWWRQGMMGSTKAQYDGIVAFSQTDFTNDLKGITIPVLVIHGDDDQVV-PYADSG 240
Query: 250 LFEVASSKDKDLKLYPGMWHGLLYGEPLENINIVFRDIINWL 291
+ K+ L Y G HG+ P + + V D++ +L
Sbjct: 241 VLSAKLVKNGKLITYKGAPHGI----PTTHADKVNADLLEFL 278
>pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX
Length = 273
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 19/243 (7%)
Query: 39 IFICHGYAMECSITMDSTATRLVNVGYAVYGMDCEGHGKSDGLQAYIENFQNLVDDYDNH 98
I HG+ + + +S L GY V D GHG+S Q + N +D Y +
Sbjct: 22 IVFSHGWPLNAD-SWESQMIFLAAQGYRVIAHDRRGHGRSS--QPWS---GNDMDTYADD 75
Query: 99 FTSICERGENKGKMKFLLGESMGG---AMALLLHRKKPDYWSGAILAAPMCKIANDMKPH 155
+ E + + + L G S GG A + H +G I A P + + P
Sbjct: 76 LAQLIEHLDLRDAV--LFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPG 133
Query: 156 PVMISILSTLCKWLPKWKAIKGQDIIEIAF----KEAAVREQVRANKYCYKG-PPRMKTG 210
+ + + + + ++ +D+ F + A + + +G K
Sbjct: 134 GLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNA 193
Query: 211 YELFRI--SLDLEKRLQEVSLPFLVLHGEQDKVTDQSASKELFEVASSKDKDLKLYPGMW 268
Y+ + D + L+++ +P LV+HG+ D+V AS + A K LK+Y G
Sbjct: 194 YDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASG-IASAALVKGSTLKIYSGAP 252
Query: 269 HGL 271
HGL
Sbjct: 253 HGL 255
>pdb|3PF8|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
pdb|3PF8|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
Length = 270
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 5/133 (3%)
Query: 20 GLKLFTCRWLPINQEPKALIFICHGYAMECSITM-DSTATRLVNVGYAVYGMDCEGHGKS 78
GL+L R P E + I HG+ + ++ A L + A D GHG S
Sbjct: 31 GLQLVGTREEPFG-EIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDS 89
Query: 79 DGLQAYIENFQNLVDDYDNHFTSICERGENKGKMKFLLGESMGGAMALLLHRKKPDYWSG 138
DG EN L + D + + + + +L+G S GG +A +L PD
Sbjct: 90 DG---KFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHSQGGVVASMLAGLYPDLIKK 146
Query: 139 AILAAPMCKIAND 151
+L AP + D
Sbjct: 147 VVLLAPAATLKGD 159
>pdb|3QM1|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate, Form Ii
Length = 265
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 5/133 (3%)
Query: 20 GLKLFTCRWLPINQEPKALIFICHGYAMECSITM-DSTATRLVNVGYAVYGMDCEGHGKS 78
GL+L R P E + I HG+ + ++ A L + A D GHG S
Sbjct: 31 GLQLVGTREEPFG-EIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDS 89
Query: 79 DGLQAYIENFQNLVDDYDNHFTSICERGENKGKMKFLLGESMGGAMALLLHRKKPDYWSG 138
DG EN L + D + + + + +L+G + GG +A +L PD
Sbjct: 90 DG---KFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKK 146
Query: 139 AILAAPMCKIAND 151
+L AP + D
Sbjct: 147 VVLLAPAATLKGD 159
>pdb|3PF9|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant
pdb|3PFB|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFB|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFC|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Ferulic
Acid
pdb|3S2Z|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
pdb|3S2Z|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
Length = 270
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 5/133 (3%)
Query: 20 GLKLFTCRWLPINQEPKALIFICHGYAMECSITM-DSTATRLVNVGYAVYGMDCEGHGKS 78
GL+L R P E + I HG+ + ++ A L + A D GHG S
Sbjct: 31 GLQLVGTREEPFG-EIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDS 89
Query: 79 DGLQAYIENFQNLVDDYDNHFTSICERGENKGKMKFLLGESMGGAMALLLHRKKPDYWSG 138
DG EN L + D + + + + +L+G + GG +A +L PD
Sbjct: 90 DG---KFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKK 146
Query: 139 AILAAPMCKIAND 151
+L AP + D
Sbjct: 147 VVLLAPAATLKGD 159
>pdb|1A8Q|A Chain A, Bromoperoxidase A1
Length = 274
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 118/292 (40%), Gaps = 43/292 (14%)
Query: 20 GLKLFTCRWLPINQEPKALIFICHGYAMECSITMDSTATRLVNVGYAVYGMDCEGHGKSD 79
G+++F W + + ++FI HG+ + D +V+ GY D GHG S
Sbjct: 8 GVEIFYKDW----GQGRPVVFI-HGWPLNGDAWQDQLKA-VVDAGYRGIAHDRRGHGHS- 60
Query: 80 GLQAYIENFQNLVDDYDNHFTSICERGENKGKMKF-----LLGESMGGA-MALLLHRKKP 133
+ D YD F + + + L+ SMGG +A + R
Sbjct: 61 ---------TPVWDGYD--FDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGT 109
Query: 134 DYWSGAIL--AAPMCKIANDMKPHPVMISILSTLCKWLPKWKAIKGQDIIEIAFKEAAVR 191
A+L A P I +D P V + L + ++ +D E F
Sbjct: 110 GRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPG 169
Query: 192 EQV-RANK--YCYKGPPRMKTG----YELFRISLDLEKRLQEVSLPFLVLHGEQDKVT-- 242
+V + NK + Y + G + F + D + L++ +P LV+HG+ D+V
Sbjct: 170 NKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYT-DFTEDLKKFDIPTLVVHGDDDQVVPI 228
Query: 243 DQSASKELFEVASSKDKDLKLYPGMWHGL-LYGEPLENINIVFRDIINWLDK 293
D + K + ++ +LK+Y G HG+ + E N RD++ +L+K
Sbjct: 229 DATGRKSAQIIPNA---ELKVYEGSSHGIAMVPGDKEKFN---RDLLEFLNK 274
>pdb|4FBL|A Chain A, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBL|B Chain B, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBL|C Chain C, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBL|D Chain D, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
Length = 281
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 80/224 (35%), Gaps = 27/224 (12%)
Query: 39 IFICHGYAMECSITMDSTATRLVNVGYAVYGMDCEGHGKSDGLQAYIENFQNLVDDYDNH 98
+ + HG+ +M A GY V GHG + E + D+
Sbjct: 54 VLVSHGFTGSPQ-SMRFLAEGFARAGYTVATPRLTGHGTTPA-----EMAASTASDWTAD 107
Query: 99 FTSICERGENKGKMKFLLGESMGGAMALLLHRKKPDYWSGAILAAPMCKIANDMKPHPVM 158
+ E + + F+ G SMGGA+ + + P+ ++G + P+ P
Sbjct: 108 IVAAMRWLEERCDVLFMTGLSMGGALTVWAAGQFPERFAGIM---PINAALRMESPDLAA 164
Query: 159 ISILSTLCKWLPKWKA-IKGQDIIEIAFKEAAVREQVRANKYCYKGPPRMKTGYELFRIS 217
++ LP + IK + + E+A+ V P +K L I
Sbjct: 165 LAFNPDAPAELPGIGSDIKAEGVKELAYPVTPV--------------PAIK---HLITIG 207
Query: 218 LDLEKRLQEVSLPFLVLHGEQDKVTDQSASKELFEVASSKDKDL 261
E L V P L++ +D V + ++ S +K+L
Sbjct: 208 AVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKEL 251
>pdb|4FBM|A Chain A, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBM|B Chain B, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
Length = 293
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 80/224 (35%), Gaps = 27/224 (12%)
Query: 39 IFICHGYAMECSITMDSTATRLVNVGYAVYGMDCEGHGKSDGLQAYIENFQNLVDDYDNH 98
+ + HG+ +M A GY V GHG + E + D+
Sbjct: 52 VLVSHGFTGSPQ-SMRFLAEGFARAGYTVATPRLTGHGTTPA-----EMAASTASDWTAD 105
Query: 99 FTSICERGENKGKMKFLLGESMGGAMALLLHRKKPDYWSGAILAAPMCKIANDMKPHPVM 158
+ E + + F+ G SMGGA+ + + P+ ++G + P+ P
Sbjct: 106 IVAAMRWLEERCDVLFMTGLSMGGALTVWAAGQFPERFAGIM---PINAALRMESPDLAA 162
Query: 159 ISILSTLCKWLPKWKA-IKGQDIIEIAFKEAAVREQVRANKYCYKGPPRMKTGYELFRIS 217
++ LP + IK + + E+A+ V P +K L I
Sbjct: 163 LAFNPDAPAELPGIGSDIKAEGVKELAYPVTPV--------------PAIK---HLITIG 205
Query: 218 LDLEKRLQEVSLPFLVLHGEQDKVTDQSASKELFEVASSKDKDL 261
E L V P L++ +D V + ++ S +K+L
Sbjct: 206 AVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKEL 249
>pdb|1XRM|A Chain A, Crystal Structure Of Active Site F1-Mutant E213q Soaked
With Peptide Ala-Phe
pdb|1XRN|A Chain A, Crystal Structure Of Active Site F1-Mutant E213q Soaked
With Peptide Phe-Ala
pdb|1XRO|A Chain A, Crystal Structure Of Active Site F1-Mutant E213q Soaked
With Peptide Phe-Leu
pdb|1XRP|A Chain A, Crystal Structure Of Active Site F1-mutant E213q Soaked
With Peptide Pro-leu-gly-gly
Length = 293
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 33/159 (20%)
Query: 114 FLLGESMGGAMALLLHRKKPDYWSGAILAAPMCKIANDMKPHPVMISILSTLCKWLP-KW 172
FL+G S GGA+AL K D+ G I++ + + P+ + ++ L LP K+
Sbjct: 100 FLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSV-------PLTVKEMNRLIDELPAKY 152
Query: 173 K-AIKG------------QDIIEIAFKEAAVR------EQVRANKYC-YKGPPRMKTGYE 212
+ AIK Q+ + + + +R E +++ +Y + R+ G
Sbjct: 153 RDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPN 212
Query: 213 LFRIS-----LDLEKRLQEVSLPFLVLHGEQDKVTDQSA 246
F I+ D+ ++ + +P L+ GE D+VT A
Sbjct: 213 QFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTPNVA 251
>pdb|1XRQ|A Chain A, Crystal Structure Of Active Site F1-Mutant E245q Soaked
With Peptide Phe-Leu
pdb|1XRR|A Chain A, Crystal Structure Of Active Site F1-mutant E245q Soaked
With Peptide Pro-pro
Length = 293
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 33/159 (20%)
Query: 114 FLLGESMGGAMALLLHRKKPDYWSGAILAAPMCKIANDMKPHPVMISILSTLCKWLP-KW 172
FL+G S GGA+AL K D+ G I++ + + P+ + ++ L LP K+
Sbjct: 100 FLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSV-------PLTVKEMNRLIDELPAKY 152
Query: 173 K-AIKG------------QDIIEIAFKEAAVR------EQVRANKYC-YKGPPRMKTGYE 212
+ AIK Q+ + + + +R E +++ +Y + R+ G
Sbjct: 153 RDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPN 212
Query: 213 LFRIS-----LDLEKRLQEVSLPFLVLHGEQDKVTDQSA 246
F I+ D+ ++ + +P L+ GE D+VT A
Sbjct: 213 EFTITGTIKDWDITDKISAIKIPTLITVGEYDQVTPNVA 251
>pdb|1XQV|A Chain A, Crystal Structure Of Inactive F1-Mutant G37a
Length = 293
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 33/159 (20%)
Query: 114 FLLGESMGGAMALLLHRKKPDYWSGAILAAPMCKIANDMKPHPVMISILSTLCKWLP-KW 172
FL+G S GGA+AL K D+ G I++ + + P+ + ++ L LP K+
Sbjct: 100 FLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSV-------PLTVKEMNRLIDELPAKY 152
Query: 173 K-AIKG------------QDIIEIAFKEAAVR------EQVRANKYC-YKGPPRMKTGYE 212
+ AIK Q+ + + + +R E +++ +Y + R+ G
Sbjct: 153 RDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPN 212
Query: 213 LFRIS-----LDLEKRLQEVSLPFLVLHGEQDKVTDQSA 246
F I+ D+ ++ + +P L+ GE D+VT A
Sbjct: 213 EFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTPNVA 251
>pdb|1MTZ|A Chain A, Crystal Structure Of The Tricorn Interacting Factor F1
pdb|1MU0|A Chain A, Crystal Structure Of The Tricorn Interacting Factor F1
Complex With Pck
Length = 293
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 33/159 (20%)
Query: 114 FLLGESMGGAMALLLHRKKPDYWSGAILAAPMCKIANDMKPHPVMISILSTLCKWLP-KW 172
FL+G S GGA+AL K D+ G I++ + + P+ + ++ L LP K+
Sbjct: 100 FLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSV-------PLTVKEMNRLIDELPAKY 152
Query: 173 K-AIKG------------QDIIEIAFKEAAVR------EQVRANKYC-YKGPPRMKTGYE 212
+ AIK Q+ + + + +R E +++ +Y + R+ G
Sbjct: 153 RDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPN 212
Query: 213 LFRIS-----LDLEKRLQEVSLPFLVLHGEQDKVTDQSA 246
F I+ D+ ++ + +P L+ GE D+VT A
Sbjct: 213 EFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTPNVA 251
>pdb|3QIT|A Chain A, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|B Chain B, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|C Chain C, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|D Chain D, Thioesterase Domain From Curacin Biosynthetic Pathway
Length = 286
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 16/126 (12%)
Query: 11 EEDFTENSRGLKLFTCRWLPINQEPKALIFICHGYAMECSITMDSTATRLVNVGYAVYGM 70
EE F E G ++ C W P+ + +C +E + A L GY V
Sbjct: 5 EEKFLEFG-GNQICLCSW----GSPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAP 59
Query: 71 DCEGHGKSDGLQAYIENFQNLVDDYDN-HFTSICER--GENKGKMKFLLGESMGGAMALL 127
D GHG+S L+ +V Y + F + +R E + L+G SMG +A
Sbjct: 60 DLFGHGRSSHLE--------MVTSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATA 111
Query: 128 LHRKKP 133
+ +P
Sbjct: 112 IASVRP 117
>pdb|1XRL|A Chain A, Crystal Structure Of Active Site F1-Mutant Y205f Complex
With Inhibitor Pck
Length = 293
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 33/159 (20%)
Query: 114 FLLGESMGGAMALLLHRKKPDYWSGAILAAPMCKIANDMKPHPVMISILSTLCKWLP-KW 172
FL+G S GGA+AL K D+ G I++ + + P+ + ++ L LP K+
Sbjct: 100 FLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSV-------PLTVKEMNRLIDELPAKY 152
Query: 173 K-AIKG------------QDIIEIAFKEAAVR------EQVRANKYC-YKGPPRMKTGYE 212
+ AIK Q+ + + + +R E +++ +Y + R+ G
Sbjct: 153 RDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVFRIMNGPN 212
Query: 213 LFRIS-----LDLEKRLQEVSLPFLVLHGEQDKVTDQSA 246
F I+ D+ ++ + +P L+ GE D+VT A
Sbjct: 213 EFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTPNVA 251
>pdb|1WOM|A Chain A, Crystal Structure Of Rsbq
pdb|1WOM|B Chain B, Crystal Structure Of Rsbq
pdb|1WPR|A Chain A, Crystal Structure Of Rsbq Inhibited By Pmsf
pdb|1WPR|B Chain B, Crystal Structure Of Rsbq Inhibited By Pmsf
Length = 271
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 70 MDCEGHGKSDGLQAYIENFQNLVDDYDNHFTSICERGENKGKMKFLLGESMGGAMALLLH 129
D G G SD L+AY N +D Y +CE + K + +G S+G + +L
Sbjct: 52 FDYVGSGHSD-LRAYDLNRYQTLDGYAQDVLDVCEALDLKETV--FVGHSVGALIGMLAS 108
Query: 130 RKKPDYWSGAILAAPMCKIAND 151
++P+ +S ++ P ND
Sbjct: 109 IRRPELFSHLVMVGPSPCYLND 130
>pdb|3RM3|A Chain A, Crystal Structure Of Monoacylglycerol Lipase From Bacillus
Sp. H257
pdb|3RLI|A Chain A, Crystal Structure Of Monoacylglycerol Lipase From Bacillus
Sp. H257 In Complex With Pmsf
Length = 270
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 92/245 (37%), Gaps = 37/245 (15%)
Query: 39 IFICHGYAMECSITMDSTATRLVNVGYAVYGMDCEGHGKSDGLQAYIENFQNLVDDYDNH 98
+ + HG+ +M A GY V +GHG +++++ +
Sbjct: 43 VLLVHGFT-GTPHSMRPLAEAYAKAGYTVCLPRLKGHGT---------HYEDMERTTFHD 92
Query: 99 FTSICERG----ENKGKMKFLLGESMGGAMALLLHRKKPDYWSGAILAAPMCKIANDMKP 154
+ + E G + + + F+ G SMGG + L L PD I A D+
Sbjct: 93 WVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-----ICGIVPINAAVDIP- 146
Query: 155 HPVMISILSTLCKWLPKWKAIKGQDIIEIAFKEAAVREQVRANKYCYKGPPRMKTGYELF 214
I+ T LP++ G D+ KE A + A+ +L
Sbjct: 147 ---AIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASL------------LQLA 191
Query: 215 RISLDLEKRLQEVSLPFLVLHGEQDKVTDQSASKELFEVASSKDKDLKLYPGMWH--GLL 272
R+ + +L + P L+ ++D V + +F+ SS +K++ +H L
Sbjct: 192 RLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLD 251
Query: 273 YGEPL 277
Y +P+
Sbjct: 252 YDQPM 256
>pdb|1XQW|A Chain A, Crystal Structure Of F1-Mutant S105a Complex With Phe-Leu
pdb|1XQX|A Chain A, Crystal Structure Of F1-Mutant S105a Complex With Pck
pdb|1XQY|A Chain A, Crystal Structure Of F1-Mutant S105a Complex With Pro-Leu-
Gly-Gly
Length = 293
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 33/159 (20%)
Query: 114 FLLGESMGGAMALLLHRKKPDYWSGAILAAPMCKIANDMKPHPVMISILSTLCKWLP-KW 172
FL+G + GGA+AL K D+ G I++ + + P+ + ++ L LP K+
Sbjct: 100 FLMGSAYGGALALAYAVKYQDHLKGLIVSGGLSSV-------PLTVKEMNRLIDELPAKY 152
Query: 173 K-AIKG------------QDIIEIAFKEAAVR------EQVRANKYC-YKGPPRMKTGYE 212
+ AIK Q+ + + + +R E +++ +Y + R+ G
Sbjct: 153 RDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPN 212
Query: 213 LFRIS-----LDLEKRLQEVSLPFLVLHGEQDKVTDQSA 246
F I+ D+ ++ + +P L+ GE D+VT A
Sbjct: 213 EFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTPNVA 251
>pdb|2WTM|A Chain A, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|B Chain B, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|C Chain C, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|D Chain D, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTN|A Chain A, Ferulic Acid Bound To Est1e From Butyrivibrio
Proteoclasticus
pdb|2WTN|B Chain B, Ferulic Acid Bound To Est1e From Butyrivibrio
Proteoclasticus
Length = 251
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 98/261 (37%), Gaps = 53/261 (20%)
Query: 20 GLKLFTCRWLPINQEPKA-LIFICHGYAMECSITMDSTATRLVN-VGYAVYGMDCEGHGK 77
G+KL +P N K L I HG+ +N +G A D GHGK
Sbjct: 10 GIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGK 69
Query: 78 SDG------LQAYIENFQNLVDDYDNHFTSICERGENKGKMKFLLGESMGGAMALLLHRK 131
SDG L ++ N +V DY + + ++ G S GG +L
Sbjct: 70 SDGKFEDHTLFKWLTNILAVV-DYAKKLDFVTDI--------YMAGHSQGGLSVMLAAAM 120
Query: 132 KPDYWSGAILAAPMCKIANDMKPHPVMISILSTLCKWLPKWKAIKGQDIIEIAFKEAAVR 191
+ D I +P I + + +++ + F +
Sbjct: 121 ERDIIKALIPLSPAAMIP-----------------------EIARTGELLGLKFDPENIP 157
Query: 192 EQVRANKYCYKGPPRMKTGYELFRISLDLEKRLQEVSLPFLVLHGEQDKVTDQSASKELF 251
+++ A + G ++K Y ++ +E + + + P L++HG+QD+ AS
Sbjct: 158 DELDA----WDG-RKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEAS---- 208
Query: 252 EVASSKD-KDLKLY--PGMWH 269
VA SK K+ KL PG H
Sbjct: 209 -VAFSKQYKNCKLVTIPGDTH 228
>pdb|3DNM|A Chain A, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|B Chain B, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|C Chain C, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|D Chain D, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
Length = 336
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 229 LPFLVLH-GEQDKVTDQSASKELFEVASSKDKDLKLYPGMWHGL-LYGEPLENINIVFRD 286
LP +++H G ++ + S + A+ +LK++P M H +YG+ + +I ++
Sbjct: 254 LPEMLIHVGSEEALLSDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKE 313
Query: 287 IINWLDKRVS 296
I +W+ R+S
Sbjct: 314 ICHWISARIS 323
>pdb|3K6K|A Chain A, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|B Chain B, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|C Chain C, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|D Chain D, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
Length = 322
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 229 LPFLVLH-GEQDKVTDQSASKELFEVASSKDKDLKLYPGMWHGL-LYGEPLENINIVFRD 286
LP +++H G ++ + S + A+ +LK++P M H +YG+ + +I ++
Sbjct: 240 LPEMLIHVGSEEALLSDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKE 299
Query: 287 IINWLDKRVS 296
I +W+ R+S
Sbjct: 300 ICHWISARIS 309
>pdb|1ZCB|A Chain A, Crystal Structure Of G Alpha 13 In Complex With Gdp
pdb|3AB3|A Chain A, Crystal Structure Of P115rhogef Rgs Domain In Complex With
G Alpha 13
pdb|3AB3|C Chain C, Crystal Structure Of P115rhogef Rgs Domain In Complex With
G Alpha 13
Length = 362
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 220 LEKRLQEVSLPFLVLHGEQDKVTDQSASKELFEVASSKDKDLKLYPGMWHGLLYGEPLEN 279
LE+++Q VS+ L E D + K L E K +D + P ++H EN
Sbjct: 281 LEEKVQVVSIKDYFLEFEGDPHCLRDVQKFLVECFRGKRRDQQQRP-LYHHFTTAINTEN 339
Query: 280 INIVFRDI 287
I +VFRD+
Sbjct: 340 IRLVFRDV 347
>pdb|3CX7|A Chain A, Crystal Structure Of Pdzrhogef Rgrgs Domain In A Complex
With Galpha-13 Bound To Gdp-Alf4
pdb|3CX8|A Chain A, Crystal Structure Of Pdzrhogef Rgrgs Domain In A Complex
With Galpha-13 Bound To Gtp-Gamma-S
Length = 338
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 220 LEKRLQEVSLPFLVLHGEQDKVTDQSASKELFEVASSKDKDLKLYPGMWHGLLYGEPLEN 279
LE+++Q VS+ L E D + K L E K +D + P ++H EN
Sbjct: 257 LEEKVQVVSIKDYFLEFEGDPHCLRDVQKFLVECFRGKRRDQQQRP-LYHHFTTAINTEN 315
Query: 280 INIVFRDI 287
I +VFRD+
Sbjct: 316 IRLVFRDV 323
>pdb|3CX6|A Chain A, Crystal Structure Of Pdzrhogef Rgrgs Domain In A Complex
With Galpha-13 Bound To Gdp
Length = 338
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 220 LEKRLQEVSLPFLVLHGEQDKVTDQSASKELFEVASSKDKDLKLYPGMWHGLLYGEPLEN 279
LE+++Q VS+ L E D + K L E K +D + P ++H EN
Sbjct: 257 LEEKVQVVSIKDYFLEFEGDPHCLRDVQKFLVECFRGKRRDQQQRP-LYHHFTTAINTEN 315
Query: 280 INIVFRDI 287
I +VFRD+
Sbjct: 316 IRLVFRDV 323
>pdb|1M33|A Chain A, Crystal Structure Of Bioh At 1.7 A
Length = 258
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 23/194 (11%)
Query: 65 YAVYGMDCEGHGKSDGLQAYIENFQNLVDDYDNHFTSICERGENKGKMKFLLGESMGGAM 124
+ ++ +D G G+S G A +L D + ++ ++ +K LG S+GG +
Sbjct: 40 FTLHLVDLPGFGRSRGFGAL-----SLADXAE----AVLQQAPDKA---IWLGWSLGGLV 87
Query: 125 ALLLHRKKPDYWSGAI-LAAPMCKIANDMKPHPVMISILSTLCKWLP--KWKAIKGQDII 181
A + P+ + +A+ C A D P + +L+ + L + + ++ +
Sbjct: 88 ASQIALTHPERVRALVTVASSPCFSARDEWPG-IKPDVLAGFQQQLSDDQQRTVERFLAL 146
Query: 182 EIAFKEAAVREQVRANKYCYKGPPR-----MKTGYELFRISLDLEKRLQEVSLPFLVLHG 236
+ E A R+ RA K P + G E+ + ++DL + LQ VS PFL L+G
Sbjct: 147 QTXGTETA-RQDARALKKTVLALPXPEVDVLNGGLEILK-TVDLRQPLQNVSXPFLRLYG 204
Query: 237 EQDKVTDQSASKEL 250
D + + L
Sbjct: 205 YLDGLVPRKVVPXL 218
>pdb|3BDI|A Chain A, Crystal Structure Of Predicted Cib-Like Hydrolase
(Np_393672.1) From Thermoplasma Acidophilum At 1.45 A
Resolution
Length = 207
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 25/144 (17%)
Query: 11 EEDFTENSRGLKLFTCRWLPINQEPKALIFICHGYAMECSITMDSTATRLVN----VGYA 66
+E+F + G ++F + + + I + HGY+ + D L N +GY
Sbjct: 5 QEEFID-VNGTRVFQRK--XVTDSNRRSIALFHGYSF---TSXDWDKADLFNNYSKIGYN 58
Query: 67 VYGMDCEGHGKSDGLQAY------IENFQNLVDDYDNHFTSICERGENKGKMKFLLGESM 120
VY D G G+S + Y +++ + DY N + G S
Sbjct: 59 VYAPDYPGFGRSASSEKYGIDRGDLKHAAEFIRDYLK---------ANGVARSVIXGASX 109
Query: 121 GGAMALLLHRKKPDYWSGAILAAP 144
GG + + PD G I AP
Sbjct: 110 GGGXVIXTTLQYPDIVDGIIAVAP 133
>pdb|4ETW|A Chain A, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
pdb|4ETW|C Chain C, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
Length = 264
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 23/186 (12%)
Query: 65 YAVYGMDCEGHGKSDGLQAYIENFQNLVDDYDNHFTSICERGENKGKMKFLLGESMGGAM 124
+ ++ +D G G+S G A +L D + ++ ++ +K LG ++GG +
Sbjct: 40 FTLHLVDLPGFGRSRGFGAL-----SLADMAE----AVLQQAPDKA---IWLGWALGGLV 87
Query: 125 ALLLHRKKPDYWSGAI-LAAPMCKIANDMKPHPVMISILSTLCKWLPK--WKAIKGQDII 181
A + P+ + +A+ C A D P + +L+ + L + ++ +
Sbjct: 88 ASQIALTHPERVQALVTVASSPCFSARDEWPG-IKPDVLAGFQQQLSDDFQRTVERFLAL 146
Query: 182 EIAFKEAAVREQVRANKYCYKGPPR-----MKTGYELFRISLDLEKRLQEVSLPFLVLHG 236
+ E A R+ RA K P + G E+ + ++DL + LQ VS+PFL L+G
Sbjct: 147 QTMGTETA-RQDARALKKTVLALPMPEVDVLNGGLEILK-TVDLRQPLQNVSMPFLRLYG 204
Query: 237 EQDKVT 242
D +
Sbjct: 205 YLDGLV 210
>pdb|3CN7|A Chain A, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
Form
pdb|3CN7|B Chain B, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
Form
pdb|3CN7|C Chain C, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
Form
pdb|3CN7|D Chain D, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
Form
pdb|3CN9|A Chain A, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Orthorhombic Crystal
Form
pdb|3CN9|B Chain B, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Orthorhombic Crystal
Form
Length = 226
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 13/80 (16%)
Query: 218 LDLEKRLQEVSLPFLVLHGEQDKVTDQSASKELFEVASSKDKDLKLYPGMWHGLLYGE-- 275
L L++R + + P L LHG QD V D + + + ++ ++ WH G
Sbjct: 158 LALDERHKRI--PVLHLHGSQDDVVDPALGRAAHDALQAQGVEVG-----WHDYPMGHEV 210
Query: 276 PLENINIVFRDIINWLDKRV 295
LE I+ DI WL KR+
Sbjct: 211 SLEEIH----DIGAWLRKRL 226
>pdb|1U2E|A Chain A, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|B Chain B, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|C Chain C, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|D Chain D, Crystal Structure Of The C-C Bond Hydrolase Mhpc
Length = 289
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 60 LVNVGYAVYGMDCEGHGKSDGLQAYIENFQNLVDDYDNHFTSICERGENKGKMKFLLGES 119
LV GY V +DC G GKSD + N + D S+ ++ + K+ LLG S
Sbjct: 62 LVEAGYRVILLDCPGWGKSDS----VVNSGSRSDLNARILKSVVDQ-LDIAKIH-LLGNS 115
Query: 120 MGGAMALLLHRKKPD 134
MGG ++ K P+
Sbjct: 116 MGGHSSVAFTLKWPE 130
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,311,265
Number of Sequences: 62578
Number of extensions: 375650
Number of successful extensions: 947
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 917
Number of HSP's gapped (non-prelim): 42
length of query: 302
length of database: 14,973,337
effective HSP length: 98
effective length of query: 204
effective length of database: 8,840,693
effective search space: 1803501372
effective search space used: 1803501372
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)