BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046307
(465 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 191/421 (45%), Gaps = 20/421 (4%)
Query: 34 LPPGTMGWPIIGETTEFLKQGPNFMKNQRARYGNFFKTHFLGCPAIISMDPEMNRYILMN 93
+PPG G P +GET FL G +F K ++ ++G FKT G I NR++
Sbjct: 13 IPPGDFGLPWLGETLNFLNDG-DFGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTK 71
Query: 94 EAKGLVPGYPQSMSDILGKCNIAAVHGTSHKHMRGALLALISPTMIRDQLLPKIDAFMRT 153
E + +P S +LG +A G H+ R L P + D LPK+D ++
Sbjct: 72 EQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTL-DSYLPKMDGIVQG 130
Query: 154 HLSDWD--NKII---NIQDKTKEMALLSSLKQIATKESGLISQSFMPEFFKLVSGTLALP 208
+L W N++I ++ T ++A + + ++ L P F + G +LP
Sbjct: 131 YLEQWGKANEVIWYPQLRRMTFDVAATLFMGEKVSQNPQLF-----PWFETYIQGLFSLP 185
Query: 209 IDLPGTKYRQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KDENKYKLXXXXXX 267
I LP T + + +AR +L L K+++ R+ ++ D LG L+ +D+N L
Sbjct: 186 IPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEEDALGILLAARDDNNQPLSLPELK 245
Query: 268 XXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSM 327
L++G+ET+++ L H + E +R+E ++ + + LK M
Sbjct: 246 DQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQE----LTAETLKKM 301
Query: 328 RFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLA 387
+ V+ E RL V G R+ ++ + GF P+GW + + + DP +YPDP
Sbjct: 302 PYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEK 361
Query: 388 FNPWRWLDKSLENQNYLFI---FGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDK 444
F+P R+ N F FGGG R+C GKE E+ F + ++ W + G
Sbjct: 362 FDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQN 421
Query: 445 L 445
L
Sbjct: 422 L 422
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 181/425 (42%), Gaps = 38/425 (8%)
Query: 40 GWPIIGETTEFLKQGPNFMKNQRARYGNFFKTHFLGCPAIISMDPEMNRYILMNEAKGLV 99
G P++G + FM R +G+ + +PE+ + +N +
Sbjct: 30 GVPLLGHGWRLARDPLAFMSQLR-DHGDVVRIKLGPKTVYAVTNPELTGALALNPDYHIA 88
Query: 100 PGYPQSMSDILGKCNIAAVHGTSHKHMRGALLALISPTMIRDQLL---PKIDAFMRTHLS 156
+S+ +LGK +A +G H+ R I P D + P ++
Sbjct: 89 GPLWESLEGLLGKEGVATANGPLHRRQRRT----IQPAFRLDAIPAYGPIMEEEAHALTE 144
Query: 157 DWD-NKIINIQDKTKEMALLSSLKQIATKESGLISQSFMPE-----------FFKLVSGT 204
W K ++ ++ +A+ ++A + L+ +M E F+ +
Sbjct: 145 RWQPGKTVDATSESFRVAV-----RVAAR--CLLRGQYMDERAERLCVALATVFRGMYRR 197
Query: 205 LALPID----LPGTKYRQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KDENKY 259
+ +P+ LP R+ A ++ ++ +++ +RRAS + D+L L+ KD+N
Sbjct: 198 MVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQKPDDLLTALLEAKDDNGD 257
Query: 260 KLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI 319
+ L G ET+++T M ++ L DHP+ + +R E A+ R P+
Sbjct: 258 PIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGR----PV 313
Query: 320 EWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDP 379
+ D++ +R T VI E RL V + R+ E EL G+ IP G I I DP
Sbjct: 314 AFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDP 373
Query: 380 YIYPDPLAFNPWRWLDKSLEN--QNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRW 437
Y D L F+P RWL + N + + F G R+CP +A+++ T+YR+
Sbjct: 374 KSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRF 433
Query: 438 EEVGG 442
E+V G
Sbjct: 434 EQVAG 438
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 178/437 (40%), Gaps = 45/437 (10%)
Query: 31 KKGLPPGTMGWPIIGETTEFLKQG--PNFMKNQRARYGNFFKTHFLGCPAIISMDPEMNR 88
K LPPG P++G + ++G +F++ R +YG+ F + P ++ + R
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSFLR-LREKYGDVFTVYLGSRPVVVLCGTDAIR 66
Query: 89 YILMNEAKGLVP-GYPQSMSDILGKCNIAAVHGTSHKHMRGALLALISP---------TM 138
L+++A+ G + I + +G + +R LA +
Sbjct: 67 EALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEER 126
Query: 139 IRDQLLPKIDAFMRTHLSDWDNKIINIQDKTKEMALLSSLKQIATKESGLI--------- 189
I+++ ++ ++ + DN ++ + + + K+ K+ +
Sbjct: 127 IQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQS 186
Query: 190 ---SQSFMPEFFKLVSGTLALPIDLPGTKYRQGLQARKNILRMLRKLLEDRRASEETQ-- 244
SF + F+L SG L PGT +RQ + + I + + +E RA+ +
Sbjct: 187 FSLISSFSSQVFELFSGFLKY---FPGT-HRQIYRNLQEINTFIGQSVEKHRATLDPSNP 242
Query: 245 ---LDMLGCLMNKDEN--KYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVL 299
+D+ M KD++ + ++G ET STT + +P V
Sbjct: 243 RDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVT 302
Query: 300 EELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVN-GVLRKTTKEMELN 358
E ++KE + RP +D M +T AVI E RL ++ GV TK+ +
Sbjct: 303 ERVQKEIEQVIGSHRPP---ALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 359 GFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDK--SLENQNYLFIFGGGTRQCPG 416
G+VIP+ ++ +DP + P FNP +LD +L+ F G R C G
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICAG 419
Query: 417 KELGIAEISTFLHYFVT 433
+ GIA FL +F T
Sbjct: 420 E--GIARTELFL-FFTT 433
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 178/437 (40%), Gaps = 45/437 (10%)
Query: 31 KKGLPPGTMGWPIIGETTEFLKQG--PNFMKNQRARYGNFFKTHFLGCPAIISMDPEMNR 88
K LPPG P++G + ++G +F++ R +YG+ F + P ++ + R
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSFLR-LREKYGDVFTVYLGSRPVVVLCGTDAIR 66
Query: 89 YILMNEAKGLVP-GYPQSMSDILGKCNIAAVHGTSHKHMRGALLALISP---------TM 138
L+++A+ G + I + +G + +R LA +
Sbjct: 67 EALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEER 126
Query: 139 IRDQLLPKIDAFMRTHLSDWDNKIINIQDKTKEMALLSSLKQIATKESGLI--------- 189
I+++ ++ ++ + DN ++ + + + K+ K+ +
Sbjct: 127 IQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQS 186
Query: 190 ---SQSFMPEFFKLVSGTLALPIDLPGTKYRQGLQARKNILRMLRKLLEDRRASEETQ-- 244
SF + F+L SG L PGT +RQ + + I + + +E RA+ +
Sbjct: 187 FSLISSFSSQVFELFSGFLK---HFPGT-HRQIYRNLQEINTFIGQSVEKHRATLDPSNP 242
Query: 245 ---LDMLGCLMNKDEN--KYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVL 299
+D+ M KD++ + ++G ET STT + +P V
Sbjct: 243 RDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVT 302
Query: 300 EELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVN-GVLRKTTKEMELN 358
E ++KE + RP +D M +T AVI E RL ++ GV TK+ +
Sbjct: 303 ERVQKEIEQVIGSHRPP---ALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 359 GFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDK--SLENQNYLFIFGGGTRQCPG 416
G+VIP+ ++ +DP + P FNP +LD +L+ F G R C G
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLG 419
Query: 417 KELGIAEISTFLHYFVT 433
+ GIA FL +F T
Sbjct: 420 E--GIARTELFL-FFTT 433
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 176/434 (40%), Gaps = 44/434 (10%)
Query: 31 KKGLPPGTMGWPIIGETTEFLKQG--PNFMKNQRARYGNFFKTHFLGCPAIISMDPEMNR 88
K LPPG P++G + ++G +F++ R +YG+ F + P ++ + R
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSFLR-LREKYGDVFTVYLGSRPVVVLCGTDAIR 66
Query: 89 YILMNEAKGLVP-GYPQSMSDILGKCNIAAVHGTSHKHMRGALLALISP---------TM 138
L+++A+ G + I + +G + +R LA +
Sbjct: 67 EALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEER 126
Query: 139 IRDQLLPKIDAFMRTHLSDWDNKIINIQDKTKEMALLSSLKQIATKESGLI--------- 189
I+++ ++ ++ + DN ++ + + + K+ K+ +
Sbjct: 127 IQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQS 186
Query: 190 ---SQSFMPEFFKLVSGTLALPIDLPGTKYRQGLQARKNILRMLRKLLEDRRASEETQ-- 244
SF + F+L SG L PGT +RQ + + I + + +E RA+ +
Sbjct: 187 FSLISSFSSQVFELFSGFLKY---FPGT-HRQIYRNLQEINTFIGQSVEKHRATLDPSNP 242
Query: 245 ---LDMLGCLMNKDEN--KYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVL 299
+D+ M KD++ + ++G ET STT + +P V
Sbjct: 243 RDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVT 302
Query: 300 EELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVN-GVLRKTTKEMELN 358
E ++KE + RP +D M +T AVI E RL ++ GV TK+ +
Sbjct: 303 ERVQKEIEQVIGSHRPP---ALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 359 GFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDK--SLENQNYLFIFGGGTRQCPG 416
G+VIP+ ++ +DP + P FNP +LD +L+ F G R C G
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLG 419
Query: 417 KELGIAEISTFLHY 430
+ GIA FL +
Sbjct: 420 E--GIARTELFLFF 431
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 178/437 (40%), Gaps = 45/437 (10%)
Query: 31 KKGLPPGTMGWPIIGETTEFLKQG--PNFMKNQRARYGNFFKTHFLGCPAIISMDPEMNR 88
K LPPG P++G + ++G +F++ R +YG+ F + P ++ + R
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSFLR-LREKYGDVFTVYLGSRPVVVLCGTDAIR 66
Query: 89 YILMNEAKGLVP-GYPQSMSDILGKCNIAAVHGTSHKHMRGALLALISP---------TM 138
L+++A+ G + I + +G + +R LA +
Sbjct: 67 EALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEER 126
Query: 139 IRDQLLPKIDAFMRTHLSDWDNKIINIQDKTKEMALLSSLKQIATKESGLI--------- 189
I+++ ++ ++ + DN ++ + + + K+ K+ +
Sbjct: 127 IQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQS 186
Query: 190 ---SQSFMPEFFKLVSGTLALPIDLPGTKYRQGLQARKNILRMLRKLLEDRRASEETQ-- 244
SF + F+L SG L PGT +RQ + + I + + +E RA+ +
Sbjct: 187 FSLISSFSSQVFELFSGFLKY---FPGT-HRQIYRNLQEINTFIGQSVEKHRATLDPSNP 242
Query: 245 ---LDMLGCLMNKDEN--KYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVL 299
+D+ M KD++ + ++G ET STT + +P V
Sbjct: 243 RDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVT 302
Query: 300 EELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVN-GVLRKTTKEMELN 358
E ++KE + RP +D M +T AVI E RL ++ GV TK+ +
Sbjct: 303 ERVQKEIEQVIGSHRPP---ALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 359 GFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDK--SLENQNYLFIFGGGTRQCPG 416
G+VIP+ ++ +DP + P FNP +LD +L+ F G R C G
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLG 419
Query: 417 KELGIAEISTFLHYFVT 433
+ GIA FL +F T
Sbjct: 420 E--GIARTELFL-FFTT 433
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 223 RKNILRMLRKLLEDRRASEETQLDMLGCLMN-----KDENKYKLXXXXXXXXXXXXLYSG 277
RK++ RM LED +++ ++D L +++ + E+ L +++G
Sbjct: 229 RKSVKRMKESRLED---TQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAG 285
Query: 278 YETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFET 337
YET S+ + L HP V ++L++E A+ + P ++ + M + V+ ET
Sbjct: 286 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP---TYDTVLQMEYLDMVVNET 342
Query: 338 SRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKS 397
RL I + R K++E+NG IP+G + + + ++ DP + +P F P R+ K+
Sbjct: 343 LRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN 402
Query: 398 LENQN-YLFI-FGGGTRQCPGKELGI 421
+N + Y++ FG G R C G +
Sbjct: 403 KDNIDPYIYTPFGSGPRNCIGMRFAL 428
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 223 RKNILRMLRKLLEDRRASEETQLDMLGCLMN-----KDENKYKLXXXXXXXXXXXXLYSG 277
RK++ RM LED +++ ++D L +++ + E+ L +++G
Sbjct: 228 RKSVKRMKESRLED---TQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAG 284
Query: 278 YETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFET 337
YET S+ + L HP V ++L++E A+ + P ++ + M + V+ ET
Sbjct: 285 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP---TYDTVLQMEYLDMVVNET 341
Query: 338 SRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKS 397
RL I + R K++E+NG IP+G + + + ++ DP + +P F P R+ K+
Sbjct: 342 LRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN 401
Query: 398 LENQN-YLFI-FGGGTRQCPGKELGI 421
+N + Y++ FG G R C G +
Sbjct: 402 KDNIDPYIYTPFGSGPRNCIGMRFAL 427
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 223 RKNILRMLRKLLEDRRASEETQLDMLGCLMN-----KDENKYKLXXXXXXXXXXXXLYSG 277
RK++ RM LED +++ ++D L +++ + E+ L +++G
Sbjct: 230 RKSVKRMKESRLED---TQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAG 286
Query: 278 YETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFET 337
YET S+ + L HP V ++L++E A+ + P ++ + M + V+ ET
Sbjct: 287 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP---TYDTVLQMEYLDMVVNET 343
Query: 338 SRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKS 397
RL I + R K++E+NG IP+G + + + ++ DP + +P F P R+ K+
Sbjct: 344 LRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKN 403
Query: 398 LENQN-YLFI-FGGGTRQCPGKELGI 421
+N + Y++ FG G R C G +
Sbjct: 404 KDNIDPYIYTPFGSGPRNCIGMRFAL 429
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 276 SGYETVSTTSMMAVKYLHDHPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRAVI 334
+G++TV+T ++ YL P++ +++KE I +RRP +D + + A I
Sbjct: 293 AGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPR----LSDRPQLPYLEAFI 348
Query: 335 FETSRLATIVNGVL-RKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
ET R ++ + + TT++ LNGF IP+ ++V ++N+DP ++ DP F P R+
Sbjct: 349 LETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERF 408
Query: 394 L--DKSLENQ---NYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKL 445
L D + N+ + +FG G R+C G+ L EI FL + + + G K+
Sbjct: 409 LTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKV 465
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 176/449 (39%), Gaps = 52/449 (11%)
Query: 31 KKGLPPGTMGWPIIG-----ETTEFLKQGPNFMKNQRARYGNFFKTHFLGCPAIISMDPE 85
K LPPG PIIG + + K NF K YG F +F P ++ E
Sbjct: 8 KGKLPPGPTPLPIIGNMLQIDVKDICKSFTNFSK----VYGPVFTVYFGMNPIVVFHGYE 63
Query: 86 MNRYILMN-----EAKGLVPGYPQSMSDILGKCNIAAVHGTSHKHMRGALLALI-----S 135
+ L++ +G P Q ++ LG I + +G K +R L +
Sbjct: 64 AVKEALIDNGEEFSGRGNSP-ISQRITKGLG---IISSNGKRWKEIRRFSLTTLRNFGMG 119
Query: 136 PTMIRDQLLPK----IDAFMRTHLSDWDNKIINIQDKTKEMALLSSLKQIATKESGLIS- 190
I D++ + ++ +T S D I + + K+ K+ ++
Sbjct: 120 KRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTL 179
Query: 191 -QSFMPEFFKL------VSGTLALPID-LPGTKYRQGLQARKNILRMLRKLLEDRRASEE 242
+ F F L V L ID PGT + + L+ +R+ +++ +AS +
Sbjct: 180 MKRFNENFRILNSPWIQVCNNFPLLIDCFPGT-HNKVLKNVALTRSYIREKVKEHQASLD 238
Query: 243 TQ--LDMLGCLM-----NKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDH 295
D + C + KD K + +G ET STT + L H
Sbjct: 239 VNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKH 298
Query: 296 PKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIV-NGVLRKTTK 353
P+V ++++E I R P D M +T AV+ E R + +V GV T
Sbjct: 299 PEVTAKVQEEIDHVIGRHRSPC----MQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTT 354
Query: 354 EMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDK--SLENQNYLFIFGGGT 411
+ + ++IP+G I + +D +P+P F+P +LDK + + +Y F G
Sbjct: 355 DTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDYFMPFSAGK 414
Query: 412 RQCPGKELGIAEISTFLHYFVTRYRWEEV 440
R C G+ L E+ FL + + + V
Sbjct: 415 RICAGEGLARMELFLFLTTILQNFNLKSV 443
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 175/434 (40%), Gaps = 44/434 (10%)
Query: 31 KKGLPPGTMGWPIIGETTEFLKQG--PNFMKNQRARYGNFFKTHFLGCPAIISMDPEMNR 88
K LPPG P++G + ++G +F++ R +YG+ F + P ++ + R
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSFLR-LREKYGDVFTVYLGSRPVVVLCGTDAIR 66
Query: 89 YILMNEAKGLVP-GYPQSMSDILGKCNIAAVHGTSHKHMRGALLALISP---------TM 138
L+++A+ G + I + +G + +R LA +
Sbjct: 67 EALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEER 126
Query: 139 IRDQLLPKIDAFMRTHLSDWDNKIINIQDKTKEMALLSSLKQIATKESGLI--------- 189
I+++ ++ ++ + DN ++ + + + K+ K+ +
Sbjct: 127 IQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQS 186
Query: 190 ---SQSFMPEFFKLVSGTLALPIDLPGTKYRQGLQARKNILRMLRKLLEDRRASEETQ-- 244
SF + F+L SG L PGT +RQ + + I + + +E RA+ +
Sbjct: 187 FSLISSFSSQVFELFSGFLKY---FPGT-HRQIYRNLQEINTFIGQSVEKHRATLDPSNP 242
Query: 245 ---LDMLGCLMNKDEN--KYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVL 299
+D+ M KD++ + +G ET STT + +P V
Sbjct: 243 RDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVT 302
Query: 300 EELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVN-GVLRKTTKEMELN 358
E ++KE + RP +D M +T AVI E RL ++ GV TK+ +
Sbjct: 303 ERVQKEIEQVIGSHRPP---ALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 359 GFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDK--SLENQNYLFIFGGGTRQCPG 416
G+VIP+ ++ +DP + P FNP +LD +L+ F G R C G
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLG 419
Query: 417 KELGIAEISTFLHY 430
+ GIA FL +
Sbjct: 420 E--GIARTELFLFF 431
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAV 333
++G ET STT + +P V E + +E I + P P E +D M +T AV
Sbjct: 277 FFAGTETTSTTLRYGFLLMLKYPHVAERVYRE---IEQVIGPHRPPELHDRAKMPYTEAV 333
Query: 334 IFETSRLATIVN-GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWR 392
I+E R + ++ GV T+ G++IP+ +++ +DP+ + P AFNP
Sbjct: 334 IYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDH 393
Query: 393 WLDK--SLENQNYLFIFGGGTRQCPGKELGIAEISTFL 428
+LD +L+ F G R C G+ + AE+ F
Sbjct: 394 FLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFF 431
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 276 SGYETVSTTSMMAVKYLHDHPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRAVI 334
+G++TV+T ++ YL +P+V ++++E I RRP +D + + A I
Sbjct: 290 AGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPR----LSDRSHLPYMEAFI 345
Query: 335 FETSRLATIVNGVL-RKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
ET R ++ V + TT++ L GF IP+G ++V +IN+D ++ +P F P R+
Sbjct: 346 LETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERF 405
Query: 394 L------DKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMK 447
L DK L + + IFG G R+C G+ + E+ FL + R + G K+
Sbjct: 406 LTPDGAIDKVLSEK--VIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDM 463
Query: 448 FP 449
P
Sbjct: 464 TP 465
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 32 KGL--PPGTMGWPIIGETTEFLKQGPNFMKNQRARYGNFFKTHFLGCPAII 80
KGL PPG GWP+IG K + +YG+ + P ++
Sbjct: 8 KGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVV 58
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRA 332
++G ETVSTT L HP+V ++ +E I + R+P+ + D M +T A
Sbjct: 277 FFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK----FEDRAKMPYTEA 332
Query: 333 VIFETSRLATIVN-GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPW 391
VI E R ++ G+ + K+ + F +P+G ++ + DP + +P FNP
Sbjct: 333 VIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQ 392
Query: 392 RWLDK--SLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWE 438
+LDK + + F G R C G+ L E+ F + +R++
Sbjct: 393 HFLDKKGQFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFK 441
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRA 332
++G ETVSTT L HP+V ++ +E I + R+P+ + D M + A
Sbjct: 277 FFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK----FEDRAKMPYMEA 332
Query: 333 VIFETSRLATIVN-GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPW 391
VI E R ++ G+ R+ K+ + F +P+G +Y + DP + +P FNP
Sbjct: 333 VIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQ 392
Query: 392 RWLDK--SLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVT 433
+L++ + + F G R C G+ G+A + FL +F T
Sbjct: 393 HFLNEKGQFKKSDAFVPFSIGKRNCFGE--GLARMELFL-FFTT 433
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Query: 246 DMLGCLMNK--DENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELR 303
D + C + K EN + +G ET STT ++ L HP+V ++
Sbjct: 244 DFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQ 303
Query: 304 KE-HLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIV-NGVLRKTTKEMELNGFV 361
+E I R P D M +T AVI E R ++ + T+++ +
Sbjct: 304 EEIERVIGRHRSPC----MQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYF 359
Query: 362 IPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKS--LENQNYLFIFGGGTRQCPGKEL 419
IP+G I + +D +P+P F+P +LD+S + +Y F G R C G+ L
Sbjct: 360 IPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDYFMPFSAGKRMCVGEGL 419
Query: 420 GIAEISTFLHYFVTRYRWEEV 440
E+ FL + ++ + +
Sbjct: 420 ARMELFLFLTSILQNFKLQSL 440
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 13/236 (5%)
Query: 211 LPGTKYRQGLQARKNILRMLRKLLEDRRASEETQL-----DMLGCLMNKDEN--KYKLXX 263
LP K++Q + + L +L+E + + QL D M++ +N
Sbjct: 212 LPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSK 271
Query: 264 XXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWND 323
+ +G ET + A+ ++ +P + +++KE I P W+D
Sbjct: 272 ENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKE---IDLIMGPNGKPSWDD 328
Query: 324 LKSMRFTRAVIFETSRLATIVN-GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIY 382
M +T AV+ E R IV G+ T+++ + G+ IP+G + +++D +
Sbjct: 329 KCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW 388
Query: 383 PDPLAFNPWRWLDKS--LENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYR 436
DP F+P R+LD S + L F G R C G+ L E+ F + R+
Sbjct: 389 RDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFH 444
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 13/236 (5%)
Query: 211 LPGTKYRQGLQARKNILRMLRKLLEDRRASEETQL-----DMLGCLMNKDEN--KYKLXX 263
LP K++Q + + L +L+E + + QL D M++ +N
Sbjct: 212 LPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSK 271
Query: 264 XXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWND 323
+ +G ET + A+ ++ +P + +++KE I P W+D
Sbjct: 272 ENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKE---IDLIMGPNGKPSWDD 328
Query: 324 LKSMRFTRAVIFETSRLATIVN-GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIY 382
M +T AV+ E R IV G+ T+++ + G+ IP+G + +++D +
Sbjct: 329 KCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW 388
Query: 383 PDPLAFNPWRWLDKS--LENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYR 436
DP F+P R+LD S + L F G R C G+ L E+ F + R+
Sbjct: 389 RDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFH 444
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 174/435 (40%), Gaps = 37/435 (8%)
Query: 31 KKGLPPGTMGW-PIIGETTEFLKQGPNFMKNQRARYGNFFKTHFLGCPAIISMDPEMNRY 89
K LPP G P +G +F K FM + +YG F + G + D +
Sbjct: 1 KGKLPPVVHGTTPFVGHIIQFGKDPLGFMLKAKKKYGGIFTMNICGNRITVVGDVHQHSK 60
Query: 90 ILMNEAKGLVPGYPQS-MSDILGKCNIAAVHGTSHKHMRGALLALISPTMIR--DQLLPK 146
+ L P S M + G+ + + MR L L + P
Sbjct: 61 FFTPRNEILSPREVYSFMVPVFGE---GVAYAAPYPRMREQLNFLAEELTVAKFQNFAPS 117
Query: 147 IDAFMRTHL-SDW--DNKIINIQDKTKEMALLSSLKQIATKE--SGLISQSFMPEFFK-- 199
I +R + ++W D INI D M + ++ + + ++ L ++ F K
Sbjct: 118 IQHEVRKFMKANWNKDEGEINILDDCSAMIINTACQCLFGEDLRKRLDARQFAQLLAKME 177
Query: 200 --LVSGTLALP--IDLPGTKYRQGLQARKNILRMLRKLLEDRRASEETQLD------MLG 249
L+ + LP + LP + + AR + +L +++ R EE Q D + G
Sbjct: 178 SCLIPAAVFLPWILKLPLPQSYRCRDARAELQDILSEIIIARE-KEEAQKDTNTSDLLAG 236
Query: 250 CLMNKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAI 309
L + ++ +++G T + T+ ++ +L D P+ K HLA
Sbjct: 237 LLGAVYRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMD-PR-----NKRHLAK 290
Query: 310 REKRRPEDPIEWN---DLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGW 366
+ E P + N ++ M F E+ R + ++RK K +++ +V+PEG
Sbjct: 291 LHQEIDEFPAQLNYDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGD 350
Query: 367 RIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEIST 426
I + D +P+P +NP R + L + + FG G +C G++ G+ ++ T
Sbjct: 351 IIACSPLLSHQDEEAFPNPREWNPER--NMKLVDGAFCG-FGAGVHKCIGEKFGLLQVKT 407
Query: 427 FLHYFVTRYRWEEVG 441
L + Y +E +G
Sbjct: 408 VLATVLRDYDFELLG 422
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 18/231 (7%)
Query: 224 KNILRMLRKLLEDRRASEETQ-----LDMLGCLM-----NKDENKYKLXXXXXXXXXXXX 273
KN+ M +LE + +E+ D + C + K + +
Sbjct: 218 KNLAFMESDILEKVKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADL 277
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRA 332
L +G ET STT A+ L HP+V ++++E + R P D M +T A
Sbjct: 278 LGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPC----MQDRGHMPYTDA 333
Query: 333 VIFETSRLATIVNGVL-RKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPW 391
V+ E R ++ L T +++ ++IP+G I + +D +P+P F+P
Sbjct: 334 VVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPR 393
Query: 392 RWLDK--SLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEV 440
+LD+ + + NY F G R C G+ L E+ FL + + + + +
Sbjct: 394 HFLDEGGNFKKSNYFMPFSAGKRICVGEGLARMELFLFLTFILQNFNLKSL 444
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 277 GYETVSTTSMMAVKYLHDHPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRAVIF 335
G ETVSTT L HP+V ++ +E I + R+P+ + D M + AVI
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK----FEDRAKMPYMEAVIH 335
Query: 336 ETSRLATIVN-GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWL 394
E R ++ + R+ K+ + F +P+G +Y + DP + +P FNP +L
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 395 DK--SLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVT 433
++ + + F G R C G+ G+A + FL +F T
Sbjct: 396 NEKGQFKKSDAFVPFSIGKRNCFGE--GLARMELFL-FFTT 433
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 277 GYETVSTTSMMAVKYLHDHPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRAVIF 335
G ETVSTT L HP+V ++ +E I + R+P+ + D M + AVI
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK----FEDRAKMPYMEAVIH 335
Query: 336 ETSRLATIVN-GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWL 394
E R ++ + R+ K+ + F +P+G +Y + DP + +P FNP +L
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 395 DK--SLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVT 433
++ + + F G R C G+ G+A + FL +F T
Sbjct: 396 NEKGQFKKSDAFVPFSIGKRNCFGE--GLARMELFL-FFTT 433
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Query: 277 GYETVSTTSMMAVKYLHDHPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRAVIF 335
G ETVSTT L HP+V ++ +E I + R+P+ + D M + AVI
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK----FEDRAKMPYMEAVIH 335
Query: 336 ETSRLATIVN-GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWL 394
E R ++ + R+ K+ + F +P+G +Y + DP + +P FNP +L
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 395 DK--SLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWE 438
++ + + F G R C G+ L E+ F + +R +
Sbjct: 396 NEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 277 GYETVSTTSMMAVKYLHDHPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRAVIF 335
G ETVSTT L HP+V ++ +E I + R+P+ + D M + AVI
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK----FEDRAKMPYMEAVIH 335
Query: 336 ETSRLATIVN-GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWL 394
E R ++ + R+ K+ + F +P+G +Y + DP + +P FNP +L
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 395 DK--SLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVT 433
++ + + F G R C G+ G+A + FL +F T
Sbjct: 396 NEKGQFKKSDAFVPFSIGKRNCFGE--GLARMELFL-FFTT 433
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 177/449 (39%), Gaps = 31/449 (6%)
Query: 31 KKGLPPGTMGWPII-------GETTEFLKQGPNFMKNQRARYGNFFKTHFLG--CPAIIS 81
KK LP G P I G F K F++N +YG F +G ++
Sbjct: 3 KKTLPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLG 62
Query: 82 MDPEMNRYILMNEAKGLVPGYPQSMSDILGKCNIAAVHGTSHKHMRGALLALISPTMIRD 141
D + NE Y + + + GK V + L + ++ +
Sbjct: 63 SDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFK- 121
Query: 142 QLLPKIDAFMRTHLSDW-DNKIINIQDKTKEMALLSSLKQIATKESGLISQSFMPEFFKL 200
Q + I+ + + W ++ N+ + E+ +L++ + KE + + +
Sbjct: 122 QHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLHGKEIRSQLNEKVAQLYAD 181
Query: 201 VSGTLA-----LPIDLPGTKYRQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMNKD 255
+ G + LP LP +R+ +A + I + K ++ RR S+E D+L L++
Sbjct: 182 LDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDILQTLLDAT 241
Query: 256 -ENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRR 314
++ L L +G T STTS +L + ++ E + +
Sbjct: 242 YKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENL 301
Query: 315 PEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTRE 374
P P+ ++ LK + I ET RL + ++R + G+ IP G ++ V +
Sbjct: 302 P--PLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCV-SPT 358
Query: 375 INY---DPYIYPDPLAFNPWRWL-DKSLENQNYLFI-FGGGTRQCPGKELGIAEISTFLH 429
+N D ++ + L FNP R+L D + + ++ FG G +C G+ +I T
Sbjct: 359 VNQRLKDSWV--ERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWS 416
Query: 430 YFVTRYRWEEVGGDKLMKFPRVEAPNGLH 458
+ Y ++ + G FP V +H
Sbjct: 417 TMLRLYEFDLIDG----YFPTVNYTTMIH 441
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 8/166 (4%)
Query: 276 SGYETVSTTSMMAVKYLHDHPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRAVI 334
+G T STT + + HP V +++E I + RRPE D M +T AVI
Sbjct: 283 AGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPE----MGDQAHMPYTTAVI 338
Query: 335 FETSRLATIVN-GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
E R IV GV T++++E+ GF IP+G + + D ++ P F+P +
Sbjct: 339 HEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHF 398
Query: 394 LDKS--LENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRW 437
LD F G R C G+ L E+ F + + +
Sbjct: 399 LDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSF 444
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 18/219 (8%)
Query: 224 KNILRMLRKLLEDRRASEETQ-----LDMLGCLMNKDENK-----YKLXXXXXXXXXXXX 273
KN+ M +LE + +E+ D + C + K E + +
Sbjct: 218 KNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDL 277
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRA 332
+G ET STT A+ L HP+V ++++E I R P D M +T A
Sbjct: 278 FGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPC----MQDRSHMPYTDA 333
Query: 333 VIFETSRLATIVNGVL-RKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPW 391
V+ E R ++ L T +++ ++IP+G I + + +D +P+P F+P
Sbjct: 334 VVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPH 393
Query: 392 RWLDK--SLENQNYLFIFGGGTRQCPGKELGIAEISTFL 428
+LD+ + + Y F G R C G+ L E+ FL
Sbjct: 394 HFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFL 432
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 18/219 (8%)
Query: 224 KNILRMLRKLLEDRRASEETQ-----LDMLGCLMNKDENK-----YKLXXXXXXXXXXXX 273
KN+ M +LE + +E+ D + C + K E + +
Sbjct: 216 KNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDL 275
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRA 332
+G ET STT A+ L HP+V ++++E I R P D M +T A
Sbjct: 276 FGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPC----MQDRSHMPYTDA 331
Query: 333 VIFETSRLATIVNGVL-RKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPW 391
V+ E R ++ L T +++ ++IP+G I + + +D +P+P F+P
Sbjct: 332 VVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPH 391
Query: 392 RWLDK--SLENQNYLFIFGGGTRQCPGKELGIAEISTFL 428
+LD+ + + Y F G R C G+ L E+ FL
Sbjct: 392 HFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFL 430
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRA 332
++G ET STT + L +P++ E+L +E I R P D + M + A
Sbjct: 276 FFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPA----IKDRQEMPYMDA 331
Query: 333 VIFETSRLATIVNGVL-RKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPW 391
V+ E R T+V L + T++ G++IP+G + + YD +PDP F P
Sbjct: 332 VVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPE 391
Query: 392 RWLDKS--LENQNYLFIFGGGTRQCPGKELGIAEISTFL 428
+L+++ + +Y F G R C G+ G+A + FL
Sbjct: 392 HFLNENGKFKYSDYFKPFSTGKRVCAGE--GLARMELFL 428
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 8/166 (4%)
Query: 276 SGYETVSTTSMMAVKYLHDHPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRAVI 334
+G T STT + + HP V +++E I + RRPE D M +T AVI
Sbjct: 283 AGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPE----MGDQAHMPYTTAVI 338
Query: 335 FETSRLATIVN-GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
E R IV G+ T++++E+ GF IP+G + + D ++ P F+P +
Sbjct: 339 HEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHF 398
Query: 394 LDKS--LENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRW 437
LD F G R C G+ L E+ F + + +
Sbjct: 399 LDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSF 444
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 263
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 264 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 318
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 319 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 378
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R CPG++ + E + L + + +E+
Sbjct: 379 RFENPSAIPQHAFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFED 426
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 7/162 (4%)
Query: 281 VSTTSMMAVKYLHDHPKVL---EELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFET 337
V+TTSM +L++ + L E LR+E L R R+ E I L+ + +A I ET
Sbjct: 289 VNTTSMTLQWHLYEMARSLNVQEMLREEVLNAR--RQAEGDIS-KMLQMVPLLKASIKET 345
Query: 338 SRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKS 397
RL I + R ++ L ++IP + V + DP + P F+P RWL K
Sbjct: 346 LRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKD 405
Query: 398 LENQNYLFI-FGGGTRQCPGKELGIAEISTFLHYFVTRYRWE 438
+ ++ + FG G RQC G+ + E++ FL + + ++ E
Sbjct: 406 KDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVE 447
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Query: 281 VSTTSMMAVKYLHD---HPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFET 337
V TTSM +L++ + KV + LR E LA R + + + L+ + +A I ET
Sbjct: 285 VDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATM---LQLVPLLKASIKET 341
Query: 338 SRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKS 397
RL I + R ++ L ++IP + V + +P + DP F+P RWL K
Sbjct: 342 LRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD 401
Query: 398 LENQNYL--FIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWE 438
+N Y FG G RQC G+ + E++ FL + +R E
Sbjct: 402 -KNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVE 443
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Query: 281 VSTTSMMAVKYLHD---HPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFET 337
V TTSM +L++ + KV + LR E LA R + + + L+ + +A I ET
Sbjct: 288 VDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATM---LQLVPLLKASIKET 344
Query: 338 SRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKS 397
RL I + R ++ L ++IP + V + +P + DP F+P RWL K
Sbjct: 345 LRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD 404
Query: 398 LENQNYL--FIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWE 438
+N Y FG G RQC G+ + E++ FL + +R E
Sbjct: 405 -KNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVE 446
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 206 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 265
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 266 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 320
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL V ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 321 LNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 380
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 381 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 428
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTQMLNGKDPETGEPLDDGNISYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL+++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKVAEE-----ATRVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C GK+ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFED 425
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFED 425
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 206 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 265
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 266 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 320
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 321 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 380
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 381 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 428
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 263
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 264 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 318
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 319 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 378
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 379 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 426
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITEL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 263
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 264 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 318
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 319 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 378
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 379 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 426
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 280 TVSTTS---MMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFE 336
+V TT+ +M + L +P V + LR+E LA E P + + RA + E
Sbjct: 289 SVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASIS-EHPQKATT--ELPLLRAALKE 345
Query: 337 TSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDK 396
T RL + + R + ++ L + IP G + V+ + + ++P P +NP RWLD
Sbjct: 346 TLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLDI 405
Query: 397 SLENQNYLFI-FGGGTRQCPGK 417
+N+ + FG G RQC G+
Sbjct: 406 RGSGRNFHHVPFGFGMRQCLGR 427
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 323 DLKSMRFTRAVIFETSRLATIVNGVL-RKTTKEMELNGFVIPEGWRIYVYTREINYDPYI 381
D ++ + A ++E R ++ V + TT + G+ IP+ ++V +N+DP
Sbjct: 334 DQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLK 393
Query: 382 YPDPLAFNPWRWLDKS-LENQNY---LFIFGGGTRQCPGKELGIAEISTFL 428
+P+P F+P R+LDK L N++ + IF G R+C G+EL ++ F+
Sbjct: 394 WPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFI 444
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 31 KKGLPPGTMGWPIIGETTEFLKQGPNFMKNQRARYGNFFKTHFLGCPAII 80
KG PPG WP+IG + RYG+ F+ CP ++
Sbjct: 7 SKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVV 56
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 206 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 265
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 266 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 320
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 321 LNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 380
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 381 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 428
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IQGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 263
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+E+ S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 264 IAGHESTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 318
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 319 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 378
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 379 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 426
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 ICGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IKGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IHGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+E+ S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHESTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IEGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 114/253 (45%), Gaps = 11/253 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+E+ S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHESTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKL-MKFPR 450
R+ + S Q+ FG G R C G++ + E + L + + +E+ +L +K +
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETQ 437
Query: 451 VEAPNGLHIRVSA 463
+ P G ++ +
Sbjct: 438 LLKPEGFVVKAKS 450
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 263
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 264 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 318
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 319 LNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 378
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 379 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 426
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IMGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ +G G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+E S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHEATSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+E S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHEATSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+E S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHEATSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 21/139 (15%)
Query: 320 EWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKE-----MELNGFVIPEGWRIYVYTRE 374
E NDL + ++I E+ RL++ + +T KE +E + I + I +Y +
Sbjct: 322 ELNDLPVLD---SIIKESLRLSSASLNI--RTAKEDFTLHLEDGSYNIRKDDIIALYPQL 376
Query: 375 INYDPYIYPDPLAFNPWRWLDKS-----------LENQNYLFIFGGGTRQCPGKELGIAE 423
++ DP IYPDPL F R+LD++ L+ + Y FG G CPG+ I E
Sbjct: 377 MHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHE 436
Query: 424 ISTFLHYFVTRYRWEEVGG 442
I FL ++ + E + G
Sbjct: 437 IKQFLILMLSYFELELIEG 455
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 21/139 (15%)
Query: 320 EWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKE-----MELNGFVIPEGWRIYVYTRE 374
E NDL + ++I E+ RL++ + +T KE +E + I + I +Y +
Sbjct: 322 ELNDLPVLD---SIIKESLRLSSASLNI--RTAKEDFTLHLEDGSYNIRKDDIIALYPQL 376
Query: 375 INYDPYIYPDPLAFNPWRWLDKS-----------LENQNYLFIFGGGTRQCPGKELGIAE 423
++ DP IYPDPL F R+LD++ L+ + Y FG G CPG+ I E
Sbjct: 377 MHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHE 436
Query: 424 ISTFLHYFVTRYRWEEVGG 442
I FL ++ + E + G
Sbjct: 437 IKQFLILMLSYFELELIEG 455
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+E S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHENTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 173/421 (41%), Gaps = 38/421 (9%)
Query: 42 PIIGETTEFLKQGPNFMKN-QRARYGNFFKTHFLGCPAIISMDPEMNRYILMNEAKGLVP 100
PI+G +F K FM+ +R F + +G I DP + + + L P
Sbjct: 26 PILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSP 85
Query: 101 GYPQS-MSDILGKCNIAAVHGTSHKHMRGALLALISPTMIR--DQLLPKIDAFMRTHLS- 156
S M + G+ + + MR L L I +P I +R ++
Sbjct: 86 REVYSFMVPVFGE---GVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAA 142
Query: 157 --DWDNKIINIQDKTKEMALLSSLKQIATKE--SGLISQSFMPEFFKLVSGTLALPIDLP 212
D D IN+ + M + ++ + + ++ L ++ F K+ S + + LP
Sbjct: 143 NWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKMESSLIPAAVFLP 202
Query: 213 GTKYRQGLQ------ARKNILRMLRKLLEDRRAS----EETQLDMLGCLMNKD-ENKYKL 261
Q AR + ++L +++ R+A+ + + D+L L++ + +
Sbjct: 203 ILLKLPLPQSARCHEARTELQKILSEIIIARKAAAVNKDSSTSDLLSGLLSAVYRDGTPM 262
Query: 262 XXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHP---KVLEELRKEHLAIREKRRPEDP 318
+++G T S T+ ++ +L HP K LE LRKE I E P
Sbjct: 263 SLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKE---IEE--FPAQL 316
Query: 319 IEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYD 378
N + M F E+ R + ++RK ++++ +V+P+G I ++D
Sbjct: 317 NYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHD 376
Query: 379 PYIYPDPLAFNPWRWLDKSLENQNYLFI-FGGGTRQCPGKELGIAEISTFLHYFVTRYRW 437
+P+P ++P R D+ +E FI FG G +C G++ G+ ++ T L Y +
Sbjct: 377 EEAFPEPRRWDPER--DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 431
Query: 438 E 438
+
Sbjct: 432 Q 432
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ +G G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L +++ KD E L L
Sbjct: 209 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIVTFL 268
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S + +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 269 IAGHETTSGLLSFTLYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 323
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G I V +++ D I+ D + F P
Sbjct: 324 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPE 383
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 384 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 431
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 128/309 (41%), Gaps = 24/309 (7%)
Query: 147 IDAFMRTHLSDW-DNKIINIQDKTKEMALL-SSLKQIATKESGLISQSFMPEFFKLVSGT 204
I+ +R ++DW + I++ D E+ + SS I K + F + +L GT
Sbjct: 117 IEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSATLIGKKFRDQLDGRFAKLYHELERGT 176
Query: 205 LALP-ID--LPGTKYRQGLQARKNILRMLRKLLEDRRA---SEETQLDMLGCLM--NKDE 256
L +D LP +R+ +AR ++ ++ ++ R A ++++ DML L+ +
Sbjct: 177 DPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAET 236
Query: 257 NKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDH----PKVLEELRKEHLAIREK 312
+ +++G+ T S T+ + L H V++EL + + R
Sbjct: 237 GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS- 295
Query: 313 RRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYT 372
+ ++ L+ + V+ ET RL + ++R E E+ G I EG +
Sbjct: 296 ------VSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASP 349
Query: 373 REINYDPYIYPDPLAFNPWRW---LDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLH 429
N P +PDP F P R+ + L N+ FG G +C G I +I
Sbjct: 350 AISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFS 409
Query: 430 YFVTRYRWE 438
+ Y +E
Sbjct: 410 VLLREYEFE 418
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 177/430 (41%), Gaps = 33/430 (7%)
Query: 31 KKGLPPG-TMGWPIIGETTEFLKQGPNFMKN-QRARYGNFFKTHFLGCPAIISMDPEMNR 88
K LPP + P +G +F K FM+ +R F G I DP +
Sbjct: 5 KGKLPPVYPVTVPFLGHIVQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHS 64
Query: 89 YILMNEAKGLVPGYPQS-MSDILGKCNIAAVHGTSHKHMRGALLALISPTMIR--DQLLP 145
+ L P + M+ + G+ + + MR L L I +P
Sbjct: 65 RFFSPRNEILSPREVYTIMTPVFGE---GVAYAAPYPRMREQLNFLAEELTIAKFQNFVP 121
Query: 146 KIDAFMRTHLSD-W--DNKIINIQDKTKEMALLSSLKQIATKE--SGLISQSFMPEFFK- 199
I +R +++ W D +IN+ + M + ++ + + ++ L ++ F K
Sbjct: 122 AIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKM 181
Query: 200 ---LVSGTLALP--IDLPGTKYRQGLQARKNILRMLRKLLEDRRASEETQ----LDMLGC 250
L+ + +P + LP + + +AR + ++L +++ R E ++ D+LG
Sbjct: 182 ESSLIPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGG 241
Query: 251 LMNKD-ENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAI 309
L+ + ++ +++G T + T+ ++ +L HPK + L K H I
Sbjct: 242 LLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEI 300
Query: 310 REKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIY 369
E P N + M F + E+ R + V+R E+++ +V+P+G I
Sbjct: 301 DE--FPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIA 358
Query: 370 VYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFI-FGGGTRQCPGKELGIAEISTFL 428
++D +P+P ++P R D+ ++ FI FG G +C G++ + ++ T L
Sbjct: 359 CSPLLSHHDEEAFPNPRLWDPER--DEKVDGA---FIGFGAGVHKCIGQKFALLQVKTIL 413
Query: 429 HYFVTRYRWE 438
Y ++
Sbjct: 414 ATAFREYDFQ 423
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 263
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+E S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 264 AAGHEATSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 318
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 319 LNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 378
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 379 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 426
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+E S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 AAGHEATSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 128/309 (41%), Gaps = 24/309 (7%)
Query: 147 IDAFMRTHLSDW-DNKIINIQDKTKEMALL-SSLKQIATKESGLISQSFMPEFFKLVSGT 204
I+ +R ++DW + I++ D E+ + SS I K + F + +L GT
Sbjct: 117 IEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGT 176
Query: 205 LALP-ID--LPGTKYRQGLQARKNILRMLRKLLEDRRA---SEETQLDMLGCLM--NKDE 256
L +D LP +R+ +AR ++ ++ ++ R A ++++ DML L+ +
Sbjct: 177 DPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAET 236
Query: 257 NKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDH----PKVLEELRKEHLAIREK 312
+ +++G+ T S T+ + L H V++EL + + R
Sbjct: 237 GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS- 295
Query: 313 RRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYT 372
+ ++ L+ + V+ ET RL + ++R E E+ G I EG +
Sbjct: 296 ------VSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASP 349
Query: 373 REINYDPYIYPDPLAFNPWRW---LDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLH 429
N P +PDP F P R+ + L N+ FG G +C G I +I
Sbjct: 350 AISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFS 409
Query: 430 YFVTRYRWE 438
+ Y +E
Sbjct: 410 VLLREYEFE 418
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ G G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 166/435 (38%), Gaps = 50/435 (11%)
Query: 33 GLPPGTMGWPIIGETTEFLKQGPNFMKNQRARYGNFFKTHFLGCPAIISMDPEMNRYIL- 91
LP + G G EF M+ R G+ G ++ N +
Sbjct: 5 ALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFR 64
Query: 92 -----MNEAKGLVPGYPQSMSDILGKCNIAAVHGTSHKHM------RGALLALISPTMIR 140
+++AK YP M+ I G+ + K M RG + + T I
Sbjct: 65 AGDDDLDQAKA----YP-FMTPIFGEAVVFDASPERRKEMLHNAALRGEQMKGHAAT-IE 118
Query: 141 DQLLPKIDAFMRTHLSDW-DNKIINIQDKTKEMALL-SSLKQIATKESGLISQSFMPEFF 198
DQ+ R ++DW + I++ D E+ + SS I K + F +
Sbjct: 119 DQV--------RRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYH 170
Query: 199 KLVSGTLALP-ID--LPGTKYRQGLQARKNILRMLRKLLEDRRA---SEETQLDMLGCLM 252
+L GT L +D LP +R+ +AR ++ ++ ++ R A ++++ DML L+
Sbjct: 171 ELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLI 230
Query: 253 --NKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDH----PKVLEELRKEH 306
+ + +++G+ T S T+ + L H V++EL + +
Sbjct: 231 AVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELY 290
Query: 307 LAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGW 366
R + ++ L+ + V+ ET RL + ++R E E+ G I EG
Sbjct: 291 GDGRS-------VSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGD 343
Query: 367 RIYVYTREINYDPYIYPDPLAFNPWRW---LDKSLENQNYLFIFGGGTRQCPGKELGIAE 423
+ N P +PDP F P R+ + L N+ FG G +C G I +
Sbjct: 344 LVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQ 403
Query: 424 ISTFLHYFVTRYRWE 438
I + Y +E
Sbjct: 404 IKAIFSVLLREYEFE 418
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 176/433 (40%), Gaps = 39/433 (9%)
Query: 31 KKGLPPG-TMGWPIIGETTEFLKQGPNFMKN-QRARYGNFFKTHFLGCPAIISMDPEMNR 88
K LPP + PI+G +F K FM+ +R F + +G I DP +
Sbjct: 1 KGKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHS 60
Query: 89 YILMNEAKGLVPGYPQS-MSDILGKCNIAAVHGTSHKHMRGALLALISPTMIR--DQLLP 145
+ + L P S M + G+ + + MR L L I +P
Sbjct: 61 RFFLPRNEVLSPREVYSFMVPVFGE---GVAYAAPYPRMREQLNFLAEELTIAKFQNFVP 117
Query: 146 KIDAFMRTHLS---DWDNKIINIQDKTKEMALLSSLKQIATKE--SGLISQSFMPEFFKL 200
I +R ++ D D IN+ + M + ++ + + ++ L ++ F K+
Sbjct: 118 AIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKM 177
Query: 201 VSGTLALPIDLPGTKYRQGLQ------ARKNILRMLRKLLEDRRASE----ETQLDMLGC 250
S + + LP Q AR + ++L +++ R+ E + D+L
Sbjct: 178 ESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSG 237
Query: 251 LMNKD-ENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHP---KVLEELRKEH 306
L++ + + +++G T S T+ ++ +L HP K LE LRKE
Sbjct: 238 LLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKE- 295
Query: 307 LAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGW 366
I E P N + M F E+ R + ++RK ++++ +V+P+G
Sbjct: 296 --IEE--FPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGD 351
Query: 367 RIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFI-FGGGTRQCPGKELGIAEIS 425
I ++D +P+P ++P R D+ +E FI FG G +C G++ G+ ++
Sbjct: 352 IIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA---FIGFGAGVHKCIGQKFGLLQVK 406
Query: 426 TFLHYFVTRYRWE 438
T L Y ++
Sbjct: 407 TILATAFRSYDFQ 419
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 128/309 (41%), Gaps = 24/309 (7%)
Query: 147 IDAFMRTHLSDW-DNKIINIQDKTKEMALL-SSLKQIATKESGLISQSFMPEFFKLVSGT 204
I+ +R ++DW + I++ D E+ + SS I K + F + +L GT
Sbjct: 117 IEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGT 176
Query: 205 LALP-ID--LPGTKYRQGLQARKNILRMLRKLLEDRRA---SEETQLDMLGCLM--NKDE 256
L +D LP +R+ +AR ++ ++ ++ R A ++++ DML L+ +
Sbjct: 177 DPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAET 236
Query: 257 NKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDH----PKVLEELRKEHLAIREK 312
+ +++G+ T S T+ + L H V++EL + + R
Sbjct: 237 GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS- 295
Query: 313 RRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYT 372
+ ++ L+ + V+ ET RL + ++R E E+ G I EG +
Sbjct: 296 ------VSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASP 349
Query: 373 REINYDPYIYPDPLAFNPWRW---LDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLH 429
N P +PDP F P R+ + L N+ FG G +C G I +I
Sbjct: 350 AISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFS 409
Query: 430 YFVTRYRWE 438
+ Y +E
Sbjct: 410 VLLREYEFE 418
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L +++ KD E L L
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIITFL 263
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 264 IAGHETTSGLLTFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 318
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E R+ ++ L G + + +G + V +++ D ++ D + F P
Sbjct: 319 LNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPE 378
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 379 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 426
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 172/418 (41%), Gaps = 32/418 (7%)
Query: 42 PIIGETTEFLKQGPNFMKN-QRARYGNFFKTHFLGCPAIISMDPEMNRYILMNEAKGLVP 100
P +G +F K FM+ +R F G I DP + + L P
Sbjct: 11 PFLGHIVQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHSRFFSPRNEILSP 70
Query: 101 GYPQS-MSDILGKCNIAAVHGTSHKHMRGALLALISPTMIR--DQLLPKIDAFMRTHLSD 157
+ M+ + G+ + + MR L L I +P I +R +++
Sbjct: 71 REVYTIMTPVFGE---GVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAE 127
Query: 158 -W--DNKIINIQDKTKEMALLSSLKQIATKE--SGLISQSFMPEFFK----LVSGTLALP 208
W D +IN+ + M + ++ + + ++ L ++ F K L+ + +P
Sbjct: 128 NWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPAAVFMP 187
Query: 209 --IDLPGTKYRQGLQARKNILRMLRKLLEDRRASEETQ----LDMLGCLMNKD-ENKYKL 261
+ LP + + +AR + ++L +++ R E ++ D+LG L+ + ++
Sbjct: 188 WLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRM 247
Query: 262 XXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEW 321
+++G T + T+ ++ +L HPK + L K H I E P
Sbjct: 248 SLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDE--FPAQLNYD 304
Query: 322 NDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYI 381
N + M F + E+ R + V+R E+++ +V+P+G I ++D
Sbjct: 305 NVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEA 364
Query: 382 YPDPLAFNPWRWLDKSLENQNYLFI-FGGGTRQCPGKELGIAEISTFLHYFVTRYRWE 438
+P+P ++P R D+ ++ FI FG G +C G++ + ++ T L Y ++
Sbjct: 365 FPNPRLWDPER--DEKVDGA---FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQ 417
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 176/433 (40%), Gaps = 39/433 (9%)
Query: 31 KKGLPPG-TMGWPIIGETTEFLKQGPNFMKN-QRARYGNFFKTHFLGCPAIISMDPEMNR 88
K LPP + PI+G +F K FM+ +R F + +G I DP +
Sbjct: 1 KGKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHS 60
Query: 89 YILMNEAKGLVPGYPQS-MSDILGKCNIAAVHGTSHKHMRGALLALISPTMIR--DQLLP 145
+ + L P S M + G+ + + MR L L I +P
Sbjct: 61 RFFLPRNEVLSPREVYSFMVPVFGE---GVAYAAPYPRMREQLNFLAEELTIAKFQNFVP 117
Query: 146 KIDAFMRTHLS---DWDNKIINIQDKTKEMALLSSLKQIATKE--SGLISQSFMPEFFKL 200
I +R ++ D D IN+ + M + ++ + + ++ L ++ F K+
Sbjct: 118 AIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKM 177
Query: 201 VSGTLALPIDLPGTKYRQGLQ------ARKNILRMLRKLLEDRRASE----ETQLDMLGC 250
S + + LP Q AR + ++L +++ R+ E + D+L
Sbjct: 178 ESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSG 237
Query: 251 LMNKD-ENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHP---KVLEELRKEH 306
L++ + + +++G T S T+ ++ +L HP K LE LRKE
Sbjct: 238 LLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKE- 295
Query: 307 LAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGW 366
I E P N + M F E+ R + ++RK ++++ +V+P+G
Sbjct: 296 --IEE--FPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGD 351
Query: 367 RIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFI-FGGGTRQCPGKELGIAEIS 425
I ++D +P+P ++P R D+ +E FI FG G +C G++ G+ ++
Sbjct: 352 IIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA---FIGFGAGVHKCIGQKFGLLQVK 406
Query: 426 TFLHYFVTRYRWE 438
T L Y ++
Sbjct: 407 TILATAFRSYDFQ 419
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 176/433 (40%), Gaps = 39/433 (9%)
Query: 31 KKGLPPG-TMGWPIIGETTEFLKQGPNFMKN-QRARYGNFFKTHFLGCPAIISMDPEMNR 88
K LPP + PI+G +F K FM+ +R F + +G I DP +
Sbjct: 2 KGKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHS 61
Query: 89 YILMNEAKGLVPGYPQS-MSDILGKCNIAAVHGTSHKHMRGALLALISPTMIR--DQLLP 145
+ + L P S M + G+ + + MR L L I +P
Sbjct: 62 RFFLPRNEVLSPREVYSFMVPVFGE---GVAYAAPYPRMREQLNFLAEELTIAKFQNFVP 118
Query: 146 KIDAFMRTHLS---DWDNKIINIQDKTKEMALLSSLKQIATKE--SGLISQSFMPEFFKL 200
I +R ++ D D IN+ + M + ++ + + ++ L ++ F K+
Sbjct: 119 AIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKM 178
Query: 201 VSGTLALPIDLPGTKYRQGLQ------ARKNILRMLRKLLEDRRASE----ETQLDMLGC 250
S + + LP Q AR + ++L +++ R+ E + D+L
Sbjct: 179 ESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSG 238
Query: 251 LMNKD-ENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHP---KVLEELRKEH 306
L++ + + +++G T S T+ ++ +L HP K LE LRKE
Sbjct: 239 LLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKE- 296
Query: 307 LAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGW 366
I E P N + M F E+ R + ++RK ++++ +V+P+G
Sbjct: 297 --IEE--FPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGD 352
Query: 367 RIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFI-FGGGTRQCPGKELGIAEIS 425
I ++D +P+P ++P R D+ +E FI FG G +C G++ G+ ++
Sbjct: 353 IIACSPLLSHHDEEAFPEPRRWDPER--DEKVEGA---FIGFGAGVHKCIGQKFGLLQVK 407
Query: 426 TFLHYFVTRYRWE 438
T L Y ++
Sbjct: 408 TILATAFRSYDFQ 420
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 172/418 (41%), Gaps = 32/418 (7%)
Query: 42 PIIGETTEFLKQGPNFMKN-QRARYGNFFKTHFLGCPAIISMDPEMNRYILMNEAKGLVP 100
P +G +F K FM+ +R F G I DP + + L P
Sbjct: 26 PFLGHIVQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHSRFFSPRNEILSP 85
Query: 101 GYPQS-MSDILGKCNIAAVHGTSHKHMRGALLALISPTMIR--DQLLPKIDAFMRTHLSD 157
+ M+ + G+ + + MR L L I +P I +R +++
Sbjct: 86 REVYTIMTPVFGE---GVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAE 142
Query: 158 -W--DNKIINIQDKTKEMALLSSLKQIATKE--SGLISQSFMPEFFK----LVSGTLALP 208
W D +IN+ + M + ++ + + ++ L ++ F K L+ + +P
Sbjct: 143 NWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPAAVFMP 202
Query: 209 --IDLPGTKYRQGLQARKNILRMLRKLLEDRRASEETQ----LDMLGCLMNKD-ENKYKL 261
+ LP + + +AR + ++L +++ R E ++ D+LG L+ + ++
Sbjct: 203 WLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRM 262
Query: 262 XXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEW 321
+++G T + T+ ++ +L HPK + L K H I E P
Sbjct: 263 SLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDE--FPAQLNYD 319
Query: 322 NDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYI 381
N + M F + E+ R + V+R E+++ +V+P+G I ++D
Sbjct: 320 NVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEA 379
Query: 382 YPDPLAFNPWRWLDKSLENQNYLFI-FGGGTRQCPGKELGIAEISTFLHYFVTRYRWE 438
+P+P ++P R D+ ++ FI FG G +C G++ + ++ T L Y ++
Sbjct: 380 FPNPRLWDPER--DEKVDGA---FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQ 432
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+ET S A+ +L +P VL++ +E R DP+ + +K +++ V
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ G G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/443 (19%), Positives = 165/443 (37%), Gaps = 61/443 (13%)
Query: 36 PGTMGWPIIGETTEF-----LKQGPNFMKNQRARYGNFFKTHFLGCPAIISMDPEMNRYI 90
PG WP++G E LK+ + + +YG F+ ++ P + +
Sbjct: 27 PGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEAL 86
Query: 91 LMNEAKGLVPGYPQSMSDILGKC---------NIAAVHGTSHKHMRGALLA-LISPTMIR 140
E+ +PQ + K + + G + +R A L+ P I
Sbjct: 87 YRTES-----AHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIM 141
Query: 141 DQLLPKIDAFMRTHLSDWDNKIINIQDKTKEMALLSS--------------------LKQ 180
K+D + L+D+ ++ + D+ + L S L Q
Sbjct: 142 -----KLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQ 196
Query: 181 IATKESGLI----SQSFMPEFFKLVSGTLALPIDLPGTKYRQGLQARKNILRMLRKLLED 236
T+E L ++ M F K++ + L L ++ A I + ++ +++
Sbjct: 197 KETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDN 256
Query: 237 R--RASEETQLDMLGCLMNKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHD 294
R R S++ D L + +D L + ET + + M + L
Sbjct: 257 RLQRYSQQPGADFLCDIYQQDH----LSKKELYAAVTELQLAAVETTANSLMWILYNLSR 312
Query: 295 HPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTK 353
+P+ L +E + + + P DL++M + +A + E+ RL V R K
Sbjct: 313 NPQAQRRLLQEVQSVLPDNQTPRA----EDLRNMPYLKACLKESMRLTPSVPFTTRTLDK 368
Query: 354 EMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFI-FGGGTR 412
L + +P+G + + T+ + + D F P RWL K + + + FG G R
Sbjct: 369 PTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINPFAHLPFGIGKR 428
Query: 413 QCPGKELGIAEISTFLHYFVTRY 435
C G+ L ++ L + + +Y
Sbjct: 429 MCIGRRLAELQLHLALCWIIQKY 451
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 175/430 (40%), Gaps = 39/430 (9%)
Query: 34 LPPG-TMGWPIIGETTEFLKQGPNFMKN-QRARYGNFFKTHFLGCPAIISMDPEMNRYIL 91
LPP + PI+G +F K FM+ +R F + +G I DP +
Sbjct: 3 LPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFF 62
Query: 92 MNEAKGLVPGYPQS-MSDILGKCNIAAVHGTSHKHMRGALLALISPTMIR--DQLLPKID 148
+ + L P S M + G+ + + MR L L I +P I
Sbjct: 63 LPRNEVLSPREVYSFMVPVFGE---GVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQ 119
Query: 149 AFMRTHLS---DWDNKIINIQDKTKEMALLSSLKQIATKE--SGLISQSFMPEFFKLVSG 203
+R ++ D D IN+ + M + ++ + + ++ L ++ F K+ S
Sbjct: 120 HEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKMESS 179
Query: 204 TLALPIDLPGTKYRQGLQ------ARKNILRMLRKLLEDRRASE----ETQLDMLGCLMN 253
+ + LP Q AR + ++L +++ R+ E + D+L L++
Sbjct: 180 LIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLS 239
Query: 254 KD-ENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHP---KVLEELRKEHLAI 309
+ + +++G T S T+ ++ +L HP K LE LRKE I
Sbjct: 240 AVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKE---I 295
Query: 310 REKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIY 369
E P N + M F E+ R + ++RK ++++ +V+P+G I
Sbjct: 296 EE--FPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIA 353
Query: 370 VYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFI-FGGGTRQCPGKELGIAEISTFL 428
++D +P+P ++P R D+ +E FI FG G +C G++ G+ ++ T L
Sbjct: 354 CSPLLSHHDEEAFPEPRRWDPER--DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTIL 408
Query: 429 HYFVTRYRWE 438
Y ++
Sbjct: 409 ATAFRSYDFQ 418
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 102/247 (41%), Gaps = 23/247 (9%)
Query: 211 LPGTKYRQGLQARKNILRMLRKLLED----RRAS----EETQLDMLGCLMNKDENKYKLX 262
LPG R+ L+ + +R LR++ D RR + EE D+L ++ +E
Sbjct: 185 LPGK--RKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQD-- 240
Query: 263 XXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWN 322
+G+ET + V L P+++ L+ E + +R +++
Sbjct: 241 DEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRY---LDFE 297
Query: 323 DLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEG----WRIYVYTREINYD 378
DL +++ V+ E+ RL G R +E ++G +P + YV R Y
Sbjct: 298 DLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTY- 356
Query: 379 PYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWE 438
+ DPL FNP R+ + + + F F G R C G++ E+ + + R +
Sbjct: 357 ---FEDPLTFNPDRFGPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFR 413
Query: 439 EVGGDKL 445
V G +
Sbjct: 414 LVPGQRF 420
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 262
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+E S A+ +L +P L++ +E R DP+ + +K +++ V
Sbjct: 263 AAGHEATSGLLSFALYFLVKNPHELQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMV 317
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D I+ D + F P
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 378 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 171/421 (40%), Gaps = 38/421 (9%)
Query: 42 PIIGETTEFLKQGPNFMKN-QRARYGNFFKTHFLGCPAIISMDPEMNRYILMNEAKGLVP 100
PI+G +F K FM+ +R F + +G I DP + + + L P
Sbjct: 26 PILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSP 85
Query: 101 GYPQS-MSDILGKCNIAAVHGTSHKHMRGALLALISPTMIR--DQLLPKIDAFMRTHLS- 156
S M + G+ + + MR L L I +P I +R ++
Sbjct: 86 REVYSFMVPVFGE---GVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAA 142
Query: 157 --DWDNKIINIQDKTKEMALLSSLKQIATKE--SGLISQSFMPEFFKLVSGTLALPIDLP 212
D D IN+ + M + ++ + + ++ L ++ F K+ S + + LP
Sbjct: 143 NWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKMESSLIPAAVFLP 202
Query: 213 GTKYRQGLQ------ARKNILRMLRKLLEDRRASE----ETQLDMLGCLMNKD-ENKYKL 261
Q AR + ++L +++ R+ E + D+L L++ + +
Sbjct: 203 ILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPM 262
Query: 262 XXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHP---KVLEELRKEHLAIREKRRPEDP 318
+++G T S T+ ++ +L HP K LE LRKE I E P
Sbjct: 263 SLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKE---IEE--FPAQL 316
Query: 319 IEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYD 378
N + M F E+ R + ++RK ++++ +V+P+G I ++D
Sbjct: 317 NYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHD 376
Query: 379 PYIYPDPLAFNPWRWLDKSLENQNYLFI-FGGGTRQCPGKELGIAEISTFLHYFVTRYRW 437
+P+P ++P R D+ +E FI FG G +C G++ G+ ++ T L Y +
Sbjct: 377 EEAFPEPRRWDPER--DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 431
Query: 438 E 438
+
Sbjct: 432 Q 432
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Query: 277 GYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFE 336
G ET ++T AV +L HP++ L++E + + D + A I E
Sbjct: 291 GTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAE 350
Query: 337 TSRLATIVNGVL-RKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLD 395
RL +V L +TT+ + G+ IPEG + + + D ++ P F P R+L+
Sbjct: 351 VLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLE 410
Query: 396 KSLENQNYLFIFGGGTRQCPGKELGIAEISTFL 428
N + L FG G R C G+ L E+ L
Sbjct: 411 PG-ANPSAL-AFGCGARVCLGESLARLELFVVL 441
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 73/214 (34%), Gaps = 34/214 (15%)
Query: 221 QARKNILRMLRKLLEDRRASEETQLDMLGCLMNKDENKYKLXXXXXXXXXXXXLYSGYET 280
QA IL +L+ RR +E D++ L+ D+ L L G ET
Sbjct: 205 QAHTEILVYFDELITARR--KEPGDDLVSTLVTDDD----LTIDDVLLNCDNVLIGGNET 258
Query: 281 VSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRL 340
AV L P +L LR + V+ E R
Sbjct: 259 TRHAITGAVHALATVPGLLTALRDGSADVD---------------------TVVEEVLRW 297
Query: 341 ATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLEN 400
+ VLR TT ++ +NG +P G + + N DP + DP F P R
Sbjct: 298 TSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR-------K 350
Query: 401 QNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTR 434
N FG G C G L E+S L R
Sbjct: 351 PNRHITFGHGMHHCLGSALARIELSVVLRVLAER 384
>pdb|3IVY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, P212121 Crystal Form
pdb|3IW0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, C2221 Crystal Form
pdb|3IW1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Androstenedione
pdb|3IW2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Econazole
Length = 433
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 316 EDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREI 375
E P +W K +R A E R AT V R ++ EL+G I +G R+ ++ R
Sbjct: 286 EHPDQWELYKKVRPETAAD-EIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSA 344
Query: 376 NYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGG-GTRQCPGKELG 420
N+D ++ DP FN L N N FGG G C G L
Sbjct: 345 NFDEEVFQDPFTFN-------ILRNPNPHVGFGGTGAHYCIGANLA 383
>pdb|2X5W|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Substrate Cholest-4-En-3-One
Length = 440
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 316 EDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREI 375
E P +W K +R A E R AT V R ++ EL+G I +G R+ ++ R
Sbjct: 293 EHPDQWELYKKVRPETAAD-EIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSA 351
Query: 376 NYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGG-GTRQCPGKELG 420
N+D ++ DP FN L N N FGG G C G L
Sbjct: 352 NFDEEVFQDPFTFN-------ILRNPNPHVGFGGTGAHYCIGANLA 390
>pdb|2XC3|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cyp125 Bound
To The Reverse Type I Inhibitor
Length = 424
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 316 EDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREI 375
E P +W K +R A E R AT V R ++ EL+G I +G R+ ++ R
Sbjct: 277 EHPDQWELYKKVRPETAAD-EIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSA 335
Query: 376 NYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGG-GTRQCPGKELG 420
N+D ++ DP FN L N N FGG G C G L
Sbjct: 336 NFDEEVFQDPFTFN-------ILRNPNPHVGFGGTGAHYCIGANLA 374
>pdb|2XN8|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125
Length = 423
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 316 EDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREI 375
E P +W K +R A E R AT V R ++ EL+G I +G R+ ++ R
Sbjct: 276 EHPDQWELYKKVRPETAAD-EIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSA 334
Query: 376 NYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGG-GTRQCPGKELG 420
N+D ++ DP FN L N N FGG G C G L
Sbjct: 335 NFDEEVFQDPFTFN-------ILRNPNPHVGFGGTGAHYCIGANLA 373
>pdb|2X5L|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125, Alternative Crystal
Form
Length = 431
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 316 EDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREI 375
E P +W K +R A E R AT V R ++ EL+G I +G R+ ++ R
Sbjct: 284 EHPDQWELYKKVRPETAAD-EIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSA 342
Query: 376 NYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGG-GTRQCPGKELG 420
N+D ++ DP FN L N N FGG G C G L
Sbjct: 343 NFDEEVFQDPFTFN-------ILRNPNPHVGFGGTGAHYCIGANLA 381
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 34/239 (14%)
Query: 196 EFFKLVSGTLALPIDLPGTKYRQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMNKD 255
EFF+ S L + T + L AR ++ L L+ + E ++G L+
Sbjct: 171 EFFQDASKRL-----VQSTDAQSALTARNDLAGYLDGLIT--QFQTEPGAGLVGALVADQ 223
Query: 256 ENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRP 315
++ L +G+ET ++ + ++V L DHP+ LR + +
Sbjct: 224 LANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLV------ 277
Query: 316 EDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREI 375
P +L +R+ +A I G R T ++E+ G +I G + V
Sbjct: 278 --PGAVEEL--LRYL--------AIADIAGG--RVATADIEVEGQLIRAGEGVIVVNSIA 323
Query: 376 NYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTR 434
N D +Y DP A + R + + FG G QC G+ L E+ L+ + R
Sbjct: 324 NRDGTVYEDPDALDIHR-------SARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 34/239 (14%)
Query: 196 EFFKLVSGTLALPIDLPGTKYRQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMNKD 255
EFF+ S L + T + L AR ++ L L+ + E ++G L+
Sbjct: 171 EFFQDASKRL-----VQSTDAQSALTARNDLAGYLDGLIT--QFQTEPGAGLVGALVADQ 223
Query: 256 ENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRP 315
++ L +G+ET ++ + ++V L DHP+ LR + +
Sbjct: 224 LANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLV------ 277
Query: 316 EDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREI 375
P +L +R+ +A I G R T ++E+ G +I G + V
Sbjct: 278 --PGAVEEL--LRYL--------AIADIAGG--RVATADIEVEGQLIRAGEGVIVVNSIA 323
Query: 376 NYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTR 434
N D +Y DP A + R + + FG G QC G+ L E+ L+ + R
Sbjct: 324 NRDGTVYEDPDALDIHR-------SARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 10/228 (4%)
Query: 217 RQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KD-ENKYKLXXXXXXXXXXXXL 274
RQ + K + ++ K++ DR+AS E D+L ++N KD E L L
Sbjct: 204 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFL 263
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPI-EWNDLKSMRFTRAV 333
+G+E S A+ +L +P L++ +E R DP+ +K +++ V
Sbjct: 264 AAGHEATSGLLSFALYFLVKNPHELQKAAEE-----AARVLVDPVPSHKQVKQLKYVGMV 318
Query: 334 IFETSRLATIVNGVLRKTTKEMELNG-FVIPEGWRIYVYTREINYDPYIYPDPLA-FNPW 391
+ E RL ++ L G + + +G + V +++ D ++ D + F P
Sbjct: 319 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPE 378
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEE 439
R+ + S Q+ FG G R C G++ + E + L + + +E+
Sbjct: 379 RFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 426
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 34/239 (14%)
Query: 196 EFFKLVSGTLALPIDLPGTKYRQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMNKD 255
EFF+ S L + T + L AR ++ L L+ + E ++G L+
Sbjct: 171 EFFQDASKRL-----VQSTDAQSALTARNDLAGYLDGLIT--QFQTEPGAGLVGALVADQ 223
Query: 256 ENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRP 315
++ L +G+ET ++ + ++V L DHP+ LR + +
Sbjct: 224 LANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLV------ 277
Query: 316 EDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREI 375
P +L +R+ +A I G R T ++E+ G +I G + V
Sbjct: 278 --PGAVEEL--LRYL--------AIADIAGG--RVATADIEVEGQLIRAGEGVIVVNSIA 323
Query: 376 NYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTR 434
N D +Y DP A + R + + FG G QC G+ L E+ L+ + R
Sbjct: 324 NRDGTVYEDPDALDIHR-------SARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 34/239 (14%)
Query: 196 EFFKLVSGTLALPIDLPGTKYRQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMNKD 255
EFF+ S L + T + L AR ++ L L+ + E ++G L+
Sbjct: 171 EFFQDASKRL-----VQSTDAQSALTARNDLAGYLDGLIT--QFQTEPGAGLVGALVADQ 223
Query: 256 ENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRP 315
++ L +G+ET ++ + ++V L DHP+ LR + +
Sbjct: 224 LANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLV------ 277
Query: 316 EDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREI 375
P +L +R+ +A I G R T ++E+ G +I G + V
Sbjct: 278 --PGAVEEL--LRYL--------AIADIAGG--RVATADIEVEGQLIRAGEGVIVVNSIA 323
Query: 376 NYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTR 434
N D +Y DP A + R + + FG G QC G+ L E+ L+ + R
Sbjct: 324 NRDGTVYEDPDALDIHR-------SARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 332 AVIFETSRLATIVNGVLRKTTKEMELNGFVIPEG-WRIYVYTREINYDPYIYPDPLAFNP 390
++ E R T V +R + EL G I G W + Y N+DP +P+P F+P
Sbjct: 324 GIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYV-AANHDPAQFPEPRKFDP 382
Query: 391 WRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGD 443
R ++ L FG G+ QC G L E+ L + R E+ G+
Sbjct: 383 TRPANRHL-------AFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAGE 428
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAV 333
L + +T+S + + + HP V E + KE + +R I+ +D++ ++
Sbjct: 304 LIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGER----DIKIDDIQKLKVMENF 359
Query: 334 IFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
I+E+ R +V+ V+RK ++ ++G+ + +G I + ++ + +P P F
Sbjct: 360 IYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRLEF-FPKPNEFT---- 414
Query: 394 LDKSLENQNYLFI--FGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGG 442
L+ +N Y + FG G R C GK + + + L + R+ + + G
Sbjct: 415 LENFAKNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQG 465
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 78/221 (35%), Gaps = 31/221 (14%)
Query: 217 RQGLQARKNILRMLRKLLED--RRASEETQLDMLGCLMNKDENKYKLXXXXXXXXXXXXL 274
R ++ R+ LR ++D R E D+ + + + L L
Sbjct: 184 RTSMEDRRRAFAELRAYIDDLITRKESEPGDDLFSRQIARQRQEGTLDHAGLVSLAFLLL 243
Query: 275 YSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVI 334
+G+ET + + V L HP E L + + P+ +
Sbjct: 244 TAGHETTANMISLGVVGLLSHP--------EQLTVVKANPGRTPM-------------AV 282
Query: 335 FETSRLATIVNGVL-RKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
E R TI +GV R T+++E+ G I G + V N+DP ++ DP + R
Sbjct: 283 EELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER- 341
Query: 394 LDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTR 434
+ FG G QC G+ L E+ R
Sbjct: 342 ------GARHHLAFGFGPHQCLGQNLARMELQIVFDTLFRR 376
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 86/230 (37%), Gaps = 31/230 (13%)
Query: 215 KYRQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KDENKYKLXXXXXXXXXXXX 273
+ Q QA + ++ + L+E RR E D+L L+ +D++ +L
Sbjct: 181 RAEQRGQAAREVVNFILDLVERRRT--EPGDDLLSALIRVQDDDDGRLSADELTSIALVL 238
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAV 333
L +G+ET + + L HP L +R++ A+
Sbjct: 239 LLAGFETSVSLIGIGTYLLLTHPDQLALVRRDPSALPN---------------------A 277
Query: 334 IFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
+ E R R +E+E+ G IP+ + V N DP +PDP F
Sbjct: 278 VEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF----- 332
Query: 394 LDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGD 443
D + + + +L FG G C G+ L E L R+ +G D
Sbjct: 333 -DVTRDTRGHLS-FGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGID 380
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 334 IFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
+ E R V+ + +++ E G PEG ++ + N+D + DP F P R+
Sbjct: 278 VQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 337
Query: 394 LDKSLENQNYLFIFGGG-----TRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKF 448
++ + ++ FI GG +CPG+ + +A + H V R++ D + F
Sbjct: 338 --RAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDF 395
Query: 449 PRVEA 453
R+ A
Sbjct: 396 ARLPA 400
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 46 ETTEFLKQGPNFMKNQRARYG-NFFKTHFL--------GCPAIISMDPEMNRYILMNEAK 96
ET L F+ Q R G N F++ FL G A E+ E +
Sbjct: 12 ETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAA-----EIFYDTTRFERE 66
Query: 97 GLVPGYPQSMSDILGKCNIAAVHGTSHKHMRGALLALISPTMIRDQLLPKIDAFMRTHLS 156
G +P Q +LG+ + + G +H+H + + L++P +R L +A R +
Sbjct: 67 GAMPVAIQKT--LLGQGGVQGLDGETHRHRKQMFMGLMTPERVR-ALAQLFEAEWRRAVP 123
Query: 157 DWDNK 161
W K
Sbjct: 124 GWTRK 128
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 336 ETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLD 395
E R V+ + +++ E G PEG ++ + N+D + DP F P R+
Sbjct: 280 EVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF-- 337
Query: 396 KSLENQNYLFIFGGG-----TRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPR 450
++ + ++ FI GG +CPG+ + +A + H V R++ D + F R
Sbjct: 338 RAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFAR 397
Query: 451 VEA 453
+ A
Sbjct: 398 LPA 400
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 33/174 (18%)
Query: 274 LYSGYETVSTTSMMAVK--YLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTR 331
+ +G ET TTSM+A+ L D P++ ELRK DP DL
Sbjct: 247 INAGRET--TTSMIALSTLLLLDRPELPAELRK------------DP----DLMP----- 283
Query: 332 AVIFETSRLATIVNGV-LRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNP 390
A + E R+ ++ + + LR +++EL+G +P + N+DP + DP +
Sbjct: 284 AAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDF 343
Query: 391 WRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDK 444
R N+ FG G QC G+ L E+ L + R + G++
Sbjct: 344 HR-------TDNHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRLAGER 390
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 336 ETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLD 395
E R V+ + +++ E G PEG ++ + N+D + DP F P R+
Sbjct: 272 EVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF-- 329
Query: 396 KSLENQNYLFIFGGG-----TRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPR 450
++ + ++ FI GG +CPG+ + +A + H V R++ D + F R
Sbjct: 330 RAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFAR 389
Query: 451 VEA 453
+ A
Sbjct: 390 LPA 392
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 46 ETTEFLKQGPNFMKNQRARYG-NFFKTHFL--------GCPAIISMDPEMNRYILMNEAK 96
ET L F+ Q R G N F++ FL G A E+ E +
Sbjct: 4 ETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAA-----EIFYDTTRFERE 58
Query: 97 GLVPGYPQSMSDILGKCNIAAVHGTSHKHMRGALLALISPTMIRDQLLPKIDAFMRTHLS 156
G +P Q +LG+ + + G +H+H + + L++P +R L +A R +
Sbjct: 59 GAMPVAIQKT--LLGQGGVQGLDGETHRHRKQMFMGLMTPERVR-ALAQLFEAEWRRAVP 115
Query: 157 DWDNK 161
W K
Sbjct: 116 GWTRK 120
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 336 ETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLD 395
E R V+ + +++ E G PEG ++ + N+D + DP F P R+
Sbjct: 272 EVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF-- 329
Query: 396 KSLENQNYLFIFGGG-----TRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPR 450
++ + ++ FI GG +CPG+ + +A + H V R++ D + F R
Sbjct: 330 RAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFAR 389
Query: 451 VEA 453
+ A
Sbjct: 390 LPA 392
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 46 ETTEFLKQGPNFMKNQRARYG-NFFKTHFL--------GCPAIISMDPEMNRYILMNEAK 96
ET L F+ Q R G N F++ FL G A E+ E +
Sbjct: 4 ETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAA-----EIFYDTTRFERE 58
Query: 97 GLVPGYPQSMSDILGKCNIAAVHGTSHKHMRGALLALISPTMIRDQLLPKIDAFMRTHLS 156
G +P Q +LG+ + + G +H+H + + L++P +R L +A R +
Sbjct: 59 GAMPVAIQKT--LLGQGGVQGLDGETHRHRKQMFMGLMTPERVR-ALAQLFEAEWRRAVP 115
Query: 157 DWDNK 161
W K
Sbjct: 116 GWTRK 120
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 336 ETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLD 395
E R V+ + +++ E G PEG ++ + N+D + DP F P R+
Sbjct: 272 EVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF-- 329
Query: 396 KSLENQNYLFIFGGG-----TRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPR 450
++ + ++ FI GG +CPG+ + +A + H V R++ D + F R
Sbjct: 330 RAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFAR 389
Query: 451 VEA 453
+ A
Sbjct: 390 LPA 392
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 46 ETTEFLKQGPNFMKNQRARYG-NFFKTHFL--------GCPAIISMDPEMNRYILMNEAK 96
ET L F+ Q R G N F++ FL G A E+ E +
Sbjct: 4 ETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAA-----EIFYDTTRFERE 58
Query: 97 GLVPGYPQSMSDILGKCNIAAVHGTSHKHMRGALLALISPTMIRDQLLPKIDAFMRTHLS 156
G +P Q +LG+ + + G +H+H + + L++P +R L +A R +
Sbjct: 59 GAMPVAIQKT--LLGQGGVQGLDGETHRHRKQMFMGLMTPERVR-ALAQLFEAEWRRAVP 115
Query: 157 DWDNK 161
W K
Sbjct: 116 GWTRK 120
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 334 IFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
+ E R V+ + +++ E G PEG ++ + N+D + DP F P R+
Sbjct: 278 VQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 337
Query: 394 LDKSLENQNYLFIFGGG-----TRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKF 448
++ + ++ FI GG +CPG+ + +A + H V R++ D + F
Sbjct: 338 --RAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDF 395
Query: 449 PRVEA 453
R+ A
Sbjct: 396 ARLPA 400
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 46 ETTEFLKQGPNFMKNQRARYG-NFFKTHFL--------GCPAIISMDPEMNRYILMNEAK 96
ET L F+ Q R G N F++ FL G A E+ E +
Sbjct: 12 ETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAA-----EIFYDTTRFERE 66
Query: 97 GLVPGYPQSMSDILGKCNIAAVHGTSHKHMRGALLALISPTMIRDQLLPKIDAFMRTHLS 156
G +P Q +LG+ + + G +H+H + + L++P +R L +A R +
Sbjct: 67 GAMPVAIQKT--LLGQGGVQGLDGETHRHRKQMFMGLMTPERVR-ALAQLFEAEWRRAVP 123
Query: 157 DWDNK 161
W K
Sbjct: 124 GWTRK 128
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 85/230 (36%), Gaps = 31/230 (13%)
Query: 215 KYRQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KDENKYKLXXXXXXXXXXXX 273
+ Q QA + ++ + L+E RR E D+L L++ +D++ +L
Sbjct: 180 RAEQRGQAAREVVNFILDLVERRRT--EPGDDLLSALISVQDDDDGRLSADELTSIALVL 237
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAV 333
L +G+E + + L HP L +R + A+
Sbjct: 238 LLAGFEASVSLIGIGTYLLLTHPDQLALVRADPSALPN---------------------A 276
Query: 334 IFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
+ E R R +E+E+ G IP+ + V N DP +PDP F+ R
Sbjct: 277 VEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFDVTR- 335
Query: 394 LDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGD 443
+ + +L FG G C G+ L E L R+ +G D
Sbjct: 336 -----DTRGHLS-FGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGID 379
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 86/230 (37%), Gaps = 31/230 (13%)
Query: 215 KYRQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KDENKYKLXXXXXXXXXXXX 273
+ Q QA + ++ + L+E RR E D+L L+ +D++ +L
Sbjct: 181 RAEQRGQAAREVVNFILDLVERRRT--EPGDDLLSALIRVQDDDDGRLSADELTSIALVL 238
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAV 333
L +G+E+ + + L HP L +R++ A+
Sbjct: 239 LLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSALPN---------------------A 277
Query: 334 IFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
+ E R R +E+E+ G IP+ + V N DP +PDP F
Sbjct: 278 VEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF----- 332
Query: 394 LDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGD 443
D + + + +L FG G C G+ L E L R+ +G D
Sbjct: 333 -DVTRDTRGHLS-FGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGID 380
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 86/230 (37%), Gaps = 31/230 (13%)
Query: 215 KYRQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KDENKYKLXXXXXXXXXXXX 273
+ Q QA + ++ + L+E RR E D+L L+ +D++ +L
Sbjct: 180 RAEQRGQAAREVVNFILDLVERRRT--EPGDDLLSALIRVQDDDDGRLSADELTSIALVL 237
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAV 333
L +G+E+ + + L HP L +R++ A+
Sbjct: 238 LLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSALPN---------------------A 276
Query: 334 IFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
+ E R R +E+E+ G IP+ + V N DP +PDP F
Sbjct: 277 VEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF----- 331
Query: 394 LDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGD 443
D + + + +L FG G C G+ L E L R+ +G D
Sbjct: 332 -DVTRDTRGHLS-FGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGID 379
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 85/230 (36%), Gaps = 31/230 (13%)
Query: 215 KYRQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KDENKYKLXXXXXXXXXXXX 273
+ Q QA + ++ + L+E RR E D+L L+ +D++ +L
Sbjct: 181 RAEQRGQAAREVVNFILDLVERRRT--EPGDDLLSALIRVQDDDDGRLSADELTSIALVL 238
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAV 333
L +G+E + + L HP L +R++ A+
Sbjct: 239 LLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPN---------------------A 277
Query: 334 IFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
+ E R R +E+E+ G IP+ + V N DP +PDP F
Sbjct: 278 VEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF----- 332
Query: 394 LDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGD 443
D + + + +L FG G C G+ L E L R+ +G D
Sbjct: 333 -DVTRDTRGHLS-FGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGID 380
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 85/230 (36%), Gaps = 31/230 (13%)
Query: 215 KYRQGLQARKNILRMLRKLLEDRRASEETQLDMLGCLMN-KDENKYKLXXXXXXXXXXXX 273
+ Q QA + ++ + L+E RR E D+L L+ +D++ +L
Sbjct: 180 RAEQRGQAAREVVNFILDLVERRRT--EPGDDLLSALIRVQDDDDGRLSADELTSIALVL 237
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAV 333
L +G+E + + L HP L +R++ A+
Sbjct: 238 LLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPN---------------------A 276
Query: 334 IFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
+ E R R +E+E+ G IP+ + V N DP +PDP F
Sbjct: 277 VEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF----- 331
Query: 394 LDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGD 443
D + + + +L FG G C G+ L E L R+ +G D
Sbjct: 332 -DVTRDTRGHLS-FGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGID 379
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 72/197 (36%), Gaps = 28/197 (14%)
Query: 238 RASEETQLDMLGCLMNKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPK 297
R E + +L L+ + + L L +G+ET + L HP+
Sbjct: 205 RKQAEPEDGLLDELIARQLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPE 264
Query: 298 VLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMEL 357
++ L ++ A+ V+ E R ++ + ++R +++E+
Sbjct: 265 QIDVLLRDPGAVS---------------------GVVEELLRFTSVSDHIVRMAKEDIEV 303
Query: 358 NGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGK 417
G I G + V +N D Y +P F+ R N + FG G QC G+
Sbjct: 304 GGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR-------NARHHVGFGHGIHQCLGQ 356
Query: 418 ELGIAEISTFLHYFVTR 434
L AE+ L R
Sbjct: 357 NLARAELEIALGGLFAR 373
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 316 EDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREI 375
++P +W K R A E R AT V+ R +++EL G I +G R+ + R
Sbjct: 269 QNPDQWELYKKERPETAAD-EIVRWATPVSAFQRTALEDVELGGVQIKKGQRVVMSYRSA 327
Query: 376 NYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGG-GTRQCPGKELG 420
N+D ++ DP FN L + N FGG G C G L
Sbjct: 328 NFDEEVFEDPHTFN-------ILRSPNPHVGFGGTGAHYCIGANLA 366
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 313 RRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYT 372
RRPE + + +S R A+I E R+ LR T+++E+ G +I G I
Sbjct: 251 RRPEVFTAFRNDESAR--AAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMI 308
Query: 373 REINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFV 432
N DP ++ DP F+ R ++N FG G C G+ + AE +T
Sbjct: 309 GAANRDPEVFDDPDVFDHTR---PPAASRN--LSFGLGPHSCAGQIISRAEATTVFAVLA 363
Query: 433 TRY 435
RY
Sbjct: 364 ERY 366
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 56/150 (37%), Gaps = 28/150 (18%)
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAV 333
L +G+ET + AV L H VL+ELR PE T A
Sbjct: 252 LTAGHETTTNFLAKAVLTLRAHRDVLDELRTT---------PES------------TPAA 290
Query: 334 IFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
+ E R V V R +++ L IP G R+ N DP +PDP + R
Sbjct: 291 VEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRA 350
Query: 394 LDKSLENQNYLFIFGGGTRQCPGKELGIAE 423
++ + FG G C G L AE
Sbjct: 351 AERQVG-------FGLGIHYCLGATLARAE 373
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 313 RRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYT 372
RRPE + + +S R A+I E R+ LR T+++E+ G +I G I
Sbjct: 249 RRPEVFTAFRNDESAR--AAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMI 306
Query: 373 REINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFV 432
N DP ++ DP F+ R ++N FG G C G+ + AE +T
Sbjct: 307 GAANRDPEVFDDPDVFDHTR---PPAASRN--LSFGLGPHSCAGQIISRAEATTVFAVLA 361
Query: 433 TRY 435
RY
Sbjct: 362 ERY 364
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 349 RKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFG 408
R ++ E+NG IP G +++ + DP ++ D F D +++ + FG
Sbjct: 296 RVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF------DITVKREAPSIAFG 349
Query: 409 GGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFP-RVEAPNGLHIRVSAA 464
GG C G L E++ + TR ++ G+ + V P+ L +R AA
Sbjct: 350 GGPHFCLGTALARLELTEAVAALATRLDPPQIAGEITWRHELGVAGPDALPLRFGAA 406
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 349 RKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFG 408
R ++ E+NG IP G +++ + DP ++ D F D +++ + FG
Sbjct: 306 RVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF------DITVKREAPSIAFG 359
Query: 409 GGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFP-RVEAPNGLHIRVSAA 464
GG C G L E++ + TR ++ G+ + V P+ L +R AA
Sbjct: 360 GGPHFCLGTALARLELTEAVAALATRLDPPQIAGEITWRHELGVAGPDALPLRFGAA 416
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 64/175 (36%), Gaps = 28/175 (16%)
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAV 333
L +G +T AV L P L+ LR + R F AV
Sbjct: 247 LSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPTLARNA----------------FEEAV 290
Query: 334 IFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
FE+ V R TT+E+EL G VI EG ++ ++ N DP + DP ++ R
Sbjct: 291 RFESP-----VQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITRK 345
Query: 394 LDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKF 448
+ FG G C G+ + E L + ++ G +F
Sbjct: 346 TSGHVG-------FGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDGPVKRRF 393
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 77/210 (36%), Gaps = 38/210 (18%)
Query: 230 LRKLLEDRRASEETQLDMLGCLM-NKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMA 288
L +L++ +R + D+L L+ DE+ +L L +G+ET
Sbjct: 218 LSRLIDSKRGQDGE--DLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANG 275
Query: 289 VKYLHDHPKVLEELRKEHL----AIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIV 344
+ L HP L LR + A+ E R E P+E
Sbjct: 276 MYALLSHPDQLAALRADMTLLDGAVEEMLRYEGPVE------------------------ 311
Query: 345 NGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYL 404
+ R + ++L+G VIP G + V + + P +PDP F+ R + +L
Sbjct: 312 SATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR------DTAGHL 365
Query: 405 FIFGGGTRQCPGKELGIAEISTFLHYFVTR 434
FG G C G L E + + R
Sbjct: 366 -AFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 77/210 (36%), Gaps = 38/210 (18%)
Query: 230 LRKLLEDRRASEETQLDMLGCLM-NKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMA 288
L +L++ +R + D+L L+ DE+ +L L +G+ET
Sbjct: 218 LSRLIDSKRGQDGE--DLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANG 275
Query: 289 VKYLHDHPKVLEELRKEHL----AIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIV 344
+ L HP L LR + A+ E R E P+E
Sbjct: 276 MYALLSHPDQLAALRADMTLLDGAVEEMLRYEGPVE------------------------ 311
Query: 345 NGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYL 404
+ R + ++L+G VIP G + V + + P +PDP F+ R + +L
Sbjct: 312 SATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR------DTAGHL 365
Query: 405 FIFGGGTRQCPGKELGIAEISTFLHYFVTR 434
FG G C G L E + + R
Sbjct: 366 -AFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 77/210 (36%), Gaps = 38/210 (18%)
Query: 230 LRKLLEDRRASEETQLDMLGCLM-NKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMA 288
L +L++ +R + D+L L+ DE+ +L L +G+ET
Sbjct: 218 LSRLIDSKRGQDGE--DLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANG 275
Query: 289 VKYLHDHPKVLEELRKEHL----AIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIV 344
+ L HP L LR + A+ E R E P+E
Sbjct: 276 MYALLSHPDQLAALRADMTLLDGAVEEMLRYEGPVE------------------------ 311
Query: 345 NGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYL 404
+ R + ++L+G VIP G + V + + P +PDP F+ R + +L
Sbjct: 312 SATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR------DTAGHL 365
Query: 405 FIFGGGTRQCPGKELGIAEISTFLHYFVTR 434
FG G C G L E + + R
Sbjct: 366 -AFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/418 (19%), Positives = 152/418 (36%), Gaps = 76/418 (18%)
Query: 50 FLKQGPNFMKNQRARY-GNFFKTHFLGCPAIISMDPEMNRYILMNEAKGLVPGYPQSMS- 107
LK+G F+KN+ RY + F+ LG I E + + P+ +
Sbjct: 17 LLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQK 76
Query: 108 DILGKCNIAAVHGTSHKHMRGALLALISPTMIRDQLLPKIDAFMRTHLSDWDNKIINIQD 167
+ G I + G++H H + L+L++P P +W + +
Sbjct: 77 SLFGVNAIQGMDGSAHIHRKMLFLSLMTP--------PHQKRLAELMTEEWKAAVTRWE- 127
Query: 168 KTKEMALLSSLKQIAT-----------KESGLISQSFMPEFFKLVSGTLALPIDLPGTKY 216
K E+ L K+I KE+ + ++ +F +V A+ G ++
Sbjct: 128 KADEVVLFEEAKEILCRVACYWAGVPLKETEVKERA--DDFIDMVDAFGAV-----GPRH 180
Query: 217 RQGLQARKNILRMLRKLLEDRRA-----SEETQLDMLGCLMNKDENKYKLXXXXXXXXXX 271
+G +AR + ++ED RA + T L + +D ++
Sbjct: 181 WKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLD---SRMAAIEL 237
Query: 272 XXLYSGYETVSTTSMMAVKYLHDHPKVLEEL-----RKEHLAIREKRR--PEDPIEWNDL 324
+ +S + + LH+HPK E L R+ + ++E RR P P
Sbjct: 238 INVLRPIVAISYFLVFSALALHEHPKYKEWLRSGNSREREMFVQEVRRYYPFGPF----- 292
Query: 325 KSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPD 384
L +V K+ N +G + + N+DP ++
Sbjct: 293 ---------------LGALVK-------KDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDH 330
Query: 385 PLAFNPWRWLDKSLENQNYLFIFGGG----TRQCPGKELGIAEISTFLHYFVTRYRWE 438
P F P R+ ++ EN + GGG +CPG+ + I + L + V + ++
Sbjct: 331 PDEFRPERFAERE-ENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYD 387
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 77/207 (37%), Gaps = 31/207 (14%)
Query: 229 MLRKLLEDRRASEETQLDMLGCLMNKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMA 288
+L +L+++RRA+ D++ L+ ++ + L + ++T + +
Sbjct: 192 LLYQLVQERRANPGD--DLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLG 249
Query: 289 VKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVN-GV 347
L D P L LR EDP + E R TI G
Sbjct: 250 TALLLDSPDQLALLR------------EDP---------SLVGNAVEELLRYLTIGQFGG 288
Query: 348 LRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIF 407
R T+++EL G I +G ++ + ++DP +P F+ R L F
Sbjct: 289 ERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPHLA-------F 341
Query: 408 GGGTRQCPGKELGIAEISTFLHYFVTR 434
G G QC G++L E+ R
Sbjct: 342 GFGAHQCIGQQLARIELQIVFETLFRR 368
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Query: 336 ETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLD 395
E R + V +R T +++++ VI EG + V+ N D ++ DP +F P R
Sbjct: 246 EALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR--- 302
Query: 396 KSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEV 440
N FG G C G L E L F ++R +E+
Sbjct: 303 ----TPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEI 343
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 77/207 (37%), Gaps = 31/207 (14%)
Query: 229 MLRKLLEDRRASEETQLDMLGCLMNKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMA 288
+L +L+++RRA+ D++ L+ ++ + L + ++T + +
Sbjct: 192 LLYQLVQERRANPGD--DLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLG 249
Query: 289 VKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVN-GV 347
L D P L LR EDP + E R TI G
Sbjct: 250 TALLLDSPDQLALLR------------EDP---------SLVGNAVEELLRYLTIGQFGG 288
Query: 348 LRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIF 407
R T+++EL G I +G ++ + ++DP +P F+ R L F
Sbjct: 289 ERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPHLA-------F 341
Query: 408 GGGTRQCPGKELGIAEISTFLHYFVTR 434
G G QC G++L E+ R
Sbjct: 342 GFGAHQCIGQQLARIELQIVFETLFRR 368
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 77/207 (37%), Gaps = 31/207 (14%)
Query: 229 MLRKLLEDRRASEETQLDMLGCLMNKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMA 288
+L +L+++RRA+ D++ L+ ++ + L + ++T + +
Sbjct: 192 LLYQLVQERRANPGD--DLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLG 249
Query: 289 VKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVN-GV 347
L D P L LR EDP + E R TI G
Sbjct: 250 TALLLDSPDQLALLR------------EDP---------SLVGNAVEELLRYLTIGQFGG 288
Query: 348 LRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIF 407
R T+++EL G I +G ++ + ++DP +P F+ R L F
Sbjct: 289 ERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPHLA-------F 341
Query: 408 GGGTRQCPGKELGIAEISTFLHYFVTR 434
G G QC G++L E+ R
Sbjct: 342 GFGAHQCIGQQLARIELQIVFETLFRR 368
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 39/209 (18%)
Query: 230 LRKLLEDRRASEETQLDMLGCLMNKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAV 289
++L++ R+ Q DM+ L+ K K KL +G+ET +V
Sbjct: 191 FKELIQKRK--RHPQQDMISMLL-KGREKDKLTEEEAASTCILLAIAGHETTVNLISNSV 247
Query: 290 KYLHDHPKVLEELRKE----HLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVN 345
L HP+ L +LR+ A+ E R E P + T+R+A+
Sbjct: 248 LCLLQHPEQLLKLRENPDLIGTAVEECLRYESPTQM---------------TARVAS--- 289
Query: 346 GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLF 405
+++++ G I +G ++Y+ N DP I+ +P F+ R + L
Sbjct: 290 -------EDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSPNPHLS------ 336
Query: 406 IFGGGTRQCPGKELGIAEISTFLHYFVTR 434
FG G C G L E ++ + R
Sbjct: 337 -FGHGHHVCLGSSLARLEAQIAINTLLQR 364
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 8/132 (6%)
Query: 318 PIEWNDLKS-MRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREIN 376
P E+ L++ R E R + V R TT+++EL G I EG ++ ++ N
Sbjct: 271 PDEFARLRADPSLARNAFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSAN 330
Query: 377 YDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYR 436
DP + DP ++ R + FG G C G+ + E L +
Sbjct: 331 RDPRRWDDPDRYDITRKTSGHVG-------FGSGVHMCVGQLVARLEGEVVLAALARKVA 383
Query: 437 WEEVGGDKLMKF 448
E+ G +F
Sbjct: 384 AIEIAGPLKRRF 395
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 378 DPYI-----YPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFV 432
PY+ +PD AF P R+L++ F FG G R C G++ + E L F
Sbjct: 295 SPYVTQRLHFPDGEAFRPERFLEERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFF 354
Query: 433 TRYRWEEVGGDKLMKFPRVEA 453
R+R + + FPRV A
Sbjct: 355 RRFRLDP------LPFPRVLA 369
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 321 WNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPY 380
W ++ I E R + V +RKT + ++L I EG + V+ N D
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEE 290
Query: 381 IYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEV 440
++ D F P R N N FG G C G L E + F R+R E+
Sbjct: 291 VFHDGEKFIPDR-------NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEI 343
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 321 WNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPY 380
W ++ I E R + V +RKT + ++L I EG + V+ N D
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEE 290
Query: 381 IYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEV 440
++ D F P R N N FG G C G L E + F R+R E+
Sbjct: 291 VFHDGEKFIPDR-------NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEI 343
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 333 VIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWR 392
I E R V + R T + E +G + G ++ + N+D ++ +P F+ R
Sbjct: 266 AIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQR 325
Query: 393 WLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTR 434
N N FG GT C G +L E+S + R
Sbjct: 326 -------NPNSHLAFGFGTHFCLGNQLARLELSLMTERVLRR 360
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 342 TIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQ 401
+ +G+ R T ++++ ++ +G + V N+DP +P+P + LD+ N
Sbjct: 279 SFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIE----LDRP--NP 332
Query: 402 NYLFIFGGGTRQCPGKELG 420
FG G CPG LG
Sbjct: 333 TSHLAFGRGQHFCPGSALG 351
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 342 TIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQ 401
+ +G+ R T ++++ ++ +G + V N+DP +P+P + LD+ N
Sbjct: 279 SFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIE----LDRP--NP 332
Query: 402 NYLFIFGGGTRQCPGKELG 420
FG G CPG LG
Sbjct: 333 TSHLAFGRGQHFCPGSALG 351
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 342 TIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQ 401
+ +G+ R T ++++ ++ +G + V N+DP +P+P + LD+ N
Sbjct: 278 SFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIE----LDRP--NP 331
Query: 402 NYLFIFGGGTRQCPGKELG 420
FG G CPG LG
Sbjct: 332 TSHLAFGRGQHFCPGSALG 350
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 342 TIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQ 401
+ +G+ R T ++++ ++ +G + V N+DP +P+P + LD+ N
Sbjct: 279 SFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIE----LDRP--NP 332
Query: 402 NYLFIFGGGTRQCPGKELG 420
FG G CPG LG
Sbjct: 333 TSHLAFGRGQHFCPGSALG 351
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 342 TIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQ 401
+ +G+ R T ++++ ++ +G + V N+DP +P+P + LD+ N
Sbjct: 279 SFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIE----LDRP--NP 332
Query: 402 NYLFIFGGGTRQCPGKELG 420
FG G CPG LG
Sbjct: 333 TSHLAFGRGQHFCPGSALG 351
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 81/215 (37%), Gaps = 32/215 (14%)
Query: 230 LRKLLEDRRASEETQLDMLGCLMNKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAV 289
LR L+++RR + D++ L+ +E+ +L L +G+ET T +++A
Sbjct: 212 LRALIDERRRTPGE--DLMSGLVAVEESGDQLTEDEIIATCNLLLIAGHET--TVNLIAN 267
Query: 290 KYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKS-MRFTRAVIFETSRLATIVNGVL 348
L LR P +W L + AVI ET R V V
Sbjct: 268 A-------ALAMLRT-------------PGQWAALAADGSRASAVIEETMRYDPPVQLVS 307
Query: 349 RKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFG 408
R ++ + +P+G + + + DP I P F+P R + L FG
Sbjct: 308 RYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRAQIRHLG-------FG 360
Query: 409 GGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGD 443
G C G L E + L R+ + G+
Sbjct: 361 KGAHFCLGAPLARLEATVALPALAARFPEARLSGE 395
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 344 VNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNY 403
+G+ R T ++++ ++ +G + V N+DP +P+P + LD+ N
Sbjct: 281 ADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIE----LDRP--NPTS 334
Query: 404 LFIFGGGTRQCPGKELG 420
FG G CPG LG
Sbjct: 335 HLAFGRGQHFCPGSALG 351
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 70/191 (36%), Gaps = 27/191 (14%)
Query: 246 DMLGCLMNKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKE 305
D+ L+ EN L + +G+ET + + AV L HP+ +
Sbjct: 212 DLTSALIQASENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPE------QR 265
Query: 306 HLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVL-RKTTKEMELNGFVIPE 364
L + + EW+ AV+ ET R +T + VL R +++ + VIP
Sbjct: 266 ALVLSGE------AEWS---------AVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPA 310
Query: 365 GWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEI 424
G + V + D + P A D + + N FG G CPG L E
Sbjct: 311 GDALIVSYGALGRDERAH-GPTADR----FDLTRTSGNRHISFGHGPHVCPGAALSRMEA 365
Query: 425 STFLHYFVTRY 435
L R+
Sbjct: 366 GVALPALYARF 376
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 346 GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLF 405
G+ R +++E+ G I G +YV N DP ++PDP + R + N
Sbjct: 292 GLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-------SPNPHV 344
Query: 406 IFGGGTRQCPGKELGIAEISTFLHYFVTR 434
FG G CPG L E + + R
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 346 GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLF 405
G+ R +++E+ G I G +YV N DP ++PDP + R + N
Sbjct: 292 GLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-------SPNPHV 344
Query: 406 IFGGGTRQCPGKELGIAEISTFLHYFVTR 434
FG G CPG L E + + R
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 346 GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLF 405
G+ R +++E+ G I G +YV N DP ++PDP + R + N
Sbjct: 292 GLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-------SPNPHV 344
Query: 406 IFGGGTRQCPGKELGIAEISTFLHYFVTR 434
FG G CPG L E + + R
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 346 GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLF 405
G+ R +++E+ G I G +YV N DP ++PDP + R + N
Sbjct: 292 GLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-------SPNPHV 344
Query: 406 IFGGGTRQCPGKELGIAEISTFLHYFVTR 434
FG G CPG L E + + R
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 346 GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLF 405
G+ R +++E+ G I G +YV N DP ++PDP + R + N
Sbjct: 292 GLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-------SPNPHV 344
Query: 406 IFGGGTRQCPGKELGIAEISTFLHYFVTR 434
FG G CPG L E + + R
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 346 GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLF 405
G+ R +++E+ G I G +YV N DP ++PDP + R + N
Sbjct: 292 GLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-------SPNPHV 344
Query: 406 IFGGGTRQCPGKELGIAEISTFLHYFVTR 434
FG G CPG L E + + R
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 346 GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLF 405
G+ R +++E+ G I G +YV N DP ++PDP + R + N
Sbjct: 292 GLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-------SPNPHV 344
Query: 406 IFGGGTRQCPGKELGIAEISTFLHYFVTR 434
FG G CPG L E + + R
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Query: 378 DPYI-----YPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFV 432
PY+ +P+ AF P R+L + F FG G R C G++ + E L F
Sbjct: 295 SPYVTQRLYFPEGEAFQPERFLAERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFF 354
Query: 433 TRYRWEEVGGDKLMKFPRVEA 453
R+R + + FPRV A
Sbjct: 355 RRFRLDP------LPFPRVLA 369
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 45/130 (34%), Gaps = 24/130 (18%)
Query: 316 EDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLR----------KTTKEMELNGFVIPEG 365
E P W+ A + R+ IV VLR TTK E+ G IP
Sbjct: 279 EHPAHWD---------AAAEDPGRIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPAD 329
Query: 366 WRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEIS 425
+ + N D + DP F+P R + + FG G C G L E
Sbjct: 330 VMVNTWVLSANRDSDAHDDPDRFDPSRKSGGAAQ-----LSFGHGVHFCLGAPLARLENR 384
Query: 426 TFLHYFVTRY 435
L + R+
Sbjct: 385 VALEEIIARF 394
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 45/130 (34%), Gaps = 24/130 (18%)
Query: 316 EDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLR----------KTTKEMELNGFVIPEG 365
E P W+ A + R+ IV VLR TTK E+ G IP
Sbjct: 259 EHPAHWD---------AAAEDPGRIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPAD 309
Query: 366 WRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEIS 425
+ + N D + DP F+P R + + FG G C G L E
Sbjct: 310 VMVNTWVLSANRDSDAHDDPDRFDPSRKSGGAAQ-----LSFGHGVHFCLGAPLARLENR 364
Query: 426 TFLHYFVTRY 435
L + R+
Sbjct: 365 VALEEIIARF 374
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 342 TIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQ 401
+ +G+ R T ++++ ++ +G + V N+DP +P+P + LD+ N
Sbjct: 279 SFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIE----LDRP--NP 332
Query: 402 NYLFIFGGGTRQCPGKELG 420
G G CPG LG
Sbjct: 333 TSHLAHGRGQHFCPGSALG 351
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 346 GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLF 405
G+ R +++E++G I G +YV N DP ++PDP + LD+ + N
Sbjct: 295 GLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRID----LDR---DPNPHL 347
Query: 406 IFGGGTRQCPGKELGIAEISTFLHYFVTR 434
+G G C G L + + + R
Sbjct: 348 AYGNGHHFCTGAVLARMQTELLVDTLLER 376
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 346 GVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLF 405
G+ R +++E++G I G +YV N DP ++PDP + LD+ + N
Sbjct: 295 GLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRID----LDR---DPNPHL 347
Query: 406 IFGGGTRQCPGKELGIAEISTFLHYFVTR 434
+G G C G L + + + R
Sbjct: 348 AYGNGHHFCTGAVLARMQTELLVDTLLER 376
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 71/169 (42%), Gaps = 10/169 (5%)
Query: 276 SGYETVSTTSMMAVKYLHDHPKVLEELRKE-HLAIREKRRPEDPIEWNDLKSMRFTRAVI 334
+G ET ++ + +L +P+V ++L +E + R P +D + A I
Sbjct: 284 AGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPT----ISDRNRLLLLEATI 339
Query: 335 FETSRLATIVNGVL-RKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
E RL + ++ K + + F + +G + + ++++ + P F P R+
Sbjct: 340 REVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERF 399
Query: 394 LDKS----LENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWE 438
L+ + + FG G R C G+ L E+ + + + R+ E
Sbjct: 400 LNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLE 448
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 4/124 (3%)
Query: 317 DPIEWNDLKSMR-FTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREI 375
+P + ND+ + R I ET R V + R+ +++ + G I + ++
Sbjct: 288 NPEQMNDVLADRSLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAA 347
Query: 376 NYDPYIYPDPLAFNPWR---WLDKSLENQNYLFIFGGGTRQCPGKELGIAEISTFLHYFV 432
N DP + P FN R + + FG G C G EI + +
Sbjct: 348 NRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVL 407
Query: 433 TRYR 436
+ R
Sbjct: 408 DKMR 411
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 342 TIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQ 401
+ +G+ R T ++++ ++ +G + V N+DP +P+P + LD+ N
Sbjct: 279 SFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIE----LDRP--NP 332
Query: 402 NYLFIFGGGTRQCPGKELG 420
FG G C G LG
Sbjct: 333 TSHLAFGRGQHFCLGSALG 351
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Query: 320 EWNDL-KSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYD 378
+W+ L + I E R + V + R T + +G + G +I + N+D
Sbjct: 255 QWDALVADVDLLPGAIEEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKIMLMFESANFD 314
Query: 379 PYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEI 424
++ DP F R N N FG GT C G +L E+
Sbjct: 315 ESVFGDPDNFRIDR-------NPNSHVAFGFGTHFCLGNQLARLEL 353
>pdb|2D68|A Chain A, Structure Of The N-Terminal Domain Of Fop (Fgfr1op)
Protein
pdb|2D68|B Chain B, Structure Of The N-Terminal Domain Of Fop (Fgfr1op)
Protein
Length = 82
Score = 32.3 bits (72), Expect = 0.60, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 177 SLKQIATKESGLISQSFMPEFFKLVSGTLALPIDLPGTKYRQGLQARKNILRML 230
SLK+ + G + S + EF + + L + P T QGL+ R+N+ R L
Sbjct: 8 SLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDL 61
>pdb|3LXH|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXH|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXI|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d1
pdb|3LXI|B Chain B, Crystal Structure Of Camphor-Bound Cyp101d1
Length = 421
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 29/144 (20%)
Query: 291 YLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRK 350
YL HP+ + E+R+E L + R V R A + + R
Sbjct: 271 YLSRHPETVAEMRREPL--------------------KLQRGVEELFRRFAVVSDA--RY 308
Query: 351 TTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGGG 410
+ME +G ++ EG I + T D + DP+ +D S + + F G
Sbjct: 309 VVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMT------VDLSRRDVTH-STFAQG 361
Query: 411 TRQCPGKELGIAEISTFLHYFVTR 434
+C G L E++ L ++ R
Sbjct: 362 PHRCAGMHLARLEVTVMLQEWLAR 385
>pdb|3AJB|A Chain A, Crystal Structure Of Human Pex3p In Complex With
N-Terminal Pex19p Peptide
Length = 330
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 298 VLEELRKEHLAIREKRRPEDPIE-WNDLKSMRFTRAVI 334
++++L E L K RP + +E W DLK + FTR+ +
Sbjct: 37 LMQQLNSESLTALLKNRPSNKLEIWEDLKIISFTRSTV 74
>pdb|3MK4|A Chain A, X-Ray Structure Of Human Pex3 In Complex With A Pex19
Derived Peptide
Length = 334
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 298 VLEELRKEHLAIREKRRPEDPIE-WNDLKSMRFTRAVI 334
++++L E L K RP + +E W DLK + FTR+ +
Sbjct: 41 LMQQLNSESLTALLKNRPSNKLEIWEDLKIISFTRSTV 78
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 333 VIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIY-PDPLAFNPW 391
+ E RL + V G+ R TT+++ + IP G R+ + N D Y PD
Sbjct: 286 AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAE---- 341
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPG 416
LD + +N L F G C G
Sbjct: 342 --LDVTRCPRNIL-TFSHGAHHCLG 363
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 333 VIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIY-PDPLAFNPW 391
+ E RL + V G+ R TT+++ + IP G R+ + N D Y PD
Sbjct: 285 AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAE---- 340
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPG 416
LD + +N L F G C G
Sbjct: 341 --LDVTRCPRNIL-TFSHGAHHCLG 362
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 333 VIFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIY-PDPLAFNPW 391
+ E RL + V G+ R TT+++ + IP G R+ + N D Y PD
Sbjct: 285 AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAE---- 340
Query: 392 RWLDKSLENQNYLFIFGGGTRQCPG 416
LD + +N L F G C G
Sbjct: 341 --LDVTRCPRNIL-TFSHGAHHCLG 362
>pdb|1T85|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam Mutant (L358pC334A)
pdb|1T86|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
pdb|1T86|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
Length = 414
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 81/214 (37%), Gaps = 31/214 (14%)
Query: 221 QARKNILRMLRKLLEDRRASEETQLDMLGCLMNKDENKYKLXXXXXXXXXXXXLYSGYET 280
+A++ + L ++E RR T D + + N N + L G +T
Sbjct: 195 EAKEALYDYLIPIIEQRRQKPGT--DAISIVANGQVNGRPITSDEAKRMCGLLLVGGLDT 252
Query: 281 VSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRL 340
V ++++L P+ +EL + RPE R A R
Sbjct: 253 VVNFLSFSMEFLAKSPEHRQELIE---------RPE-----------RIPAACEELLRRF 292
Query: 341 ATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLEN 400
+ + +G R T + E +G + +G +I + D P+ +D S +
Sbjct: 293 SLVADG--RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMH------VDFSRQK 344
Query: 401 QNYLFIFGGGTRQCPGKELGIAEISTFLHYFVTR 434
++ FG G+ CPG+ L EI L ++TR
Sbjct: 345 VSHT-TFGHGSHLCPGQHLARREIIVTLKEWLTR 377
>pdb|4DXY|A Chain A, Crystal Structures Of Cyp101d2 Y96a Mutant
Length = 417
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 71/189 (37%), Gaps = 29/189 (15%)
Query: 246 DMLGCLMNKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKE 305
D++ ++N + N ++ L G +TV + +L HP+++ ELR
Sbjct: 225 DLITLMVNSEINGERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRS- 283
Query: 306 HLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEG 365
DP++ F R + +R+ K+ E G + G
Sbjct: 284 -----------DPLKLMRGAEEMFRRFPVVSEARM----------VAKDQEYKGVFLKRG 322
Query: 366 WRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEIS 425
I + T D P+ PW+ LD S + ++ FGGG +C G L E+
Sbjct: 323 DMILLPTALHGLDDAANPE-----PWK-LDFSRRSISHS-TFGGGPHRCAGMHLARMEVI 375
Query: 426 TFLHYFVTR 434
L ++ R
Sbjct: 376 VTLEEWLKR 384
>pdb|3NV5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d2
pdb|3NV6|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d2
Length = 452
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 71/189 (37%), Gaps = 29/189 (15%)
Query: 246 DMLGCLMNKDENKYKLXXXXXXXXXXXXLYSGYETVSTTSMMAVKYLHDHPKVLEELRKE 305
D++ ++N + N ++ L G +TV + +L HP+++ ELR
Sbjct: 260 DLITLMVNSEINGERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRS- 318
Query: 306 HLAIREKRRPEDPIEWNDLKSMRFTRAVIFETSRLATIVNGVLRKTTKEMELNGFVIPEG 365
DP++ F R + +R+ K+ E G + G
Sbjct: 319 -----------DPLKLMRGAEEMFRRFPVVSEARM----------VAKDQEYKGVFLKRG 357
Query: 366 WRIYVYTREINYDPYIYPDPLAFNPWRWLDKSLENQNYLFIFGGGTRQCPGKELGIAEIS 425
I + T D P+ PW+ LD S + ++ FGGG +C G L E+
Sbjct: 358 DMILLPTALHGLDDAANPE-----PWK-LDFSRRSISHS-TFGGGPHRCAGMHLARMEVI 410
Query: 426 TFLHYFVTR 434
L ++ R
Sbjct: 411 VTLEEWLKR 419
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 57/146 (39%), Gaps = 28/146 (19%)
Query: 274 LYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIREKRRPEDPIEWNDLKSMRFTRAV 333
+++G+ETV++ AV L HP L+ LR RRP DL + +
Sbjct: 231 IFTGHETVASQVGNAVLSLLAHPDQLDLLR---------RRP-------DLLAQAVEECL 274
Query: 334 IFETSRLATIVNGVLRKTTKEMELNGFVIPEGWRIYVYTREINYDPYIYPDPLAFNPWRW 393
++ S V R+ ++EL G + + V N DP Y P F+ R
Sbjct: 275 RYDPS-----VQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERD 329
Query: 394 LDKSLENQNYLFIFGGGTRQCPGKEL 419
S+ FG G R C G L
Sbjct: 330 PVPSMS-------FGAGMRYCLGSYL 348
>pdb|4G9K|A Chain A, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae
pdb|4G9K|B Chain B, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae
pdb|4GAP|A Chain A, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae In Complex With Nad+
pdb|4GAP|B Chain B, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae In Complex With Nad+
pdb|4GAV|A Chain A, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae In Complex With Quinone
pdb|4GAV|B Chain B, Structure Of The Ndi1 Protein From Saccharomyces
Cerevisiae In Complex With Quinone
Length = 471
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 33 GLPPGTMGWPIIGETTEFLKQGPNFMKNQRARYGNFFKTHFLGCPAIISMDPEMNRYI 90
G P T G P + + FLK+ PN ++ +R N K + L DPE R +
Sbjct: 135 GAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLP-----KGDPERRRLL 187
>pdb|4G6G|A Chain A, Crystal Structure Of Ndh With Trt
pdb|4G6G|B Chain B, Crystal Structure Of Ndh With Trt
pdb|4G6H|A Chain A, Crystal Structure Of Ndh With Nadh
pdb|4G6H|B Chain B, Crystal Structure Of Ndh With Nadh
pdb|4G73|A Chain A, Crystal Structure Of Ndh With Nadh And Quinone
pdb|4G73|B Chain B, Crystal Structure Of Ndh With Nadh And Quinone
pdb|4G74|A Chain A, Crystal Structure Of Ndh With Quinone
pdb|4G74|B Chain B, Crystal Structure Of Ndh With Quinone
Length = 502
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 33 GLPPGTMGWPIIGETTEFLKQGPNFMKNQRARYGNFFKTHFLGCPAIISMDPEMNRYI 90
G P T G P + + FLK+ PN ++ +R N K + L DPE R +
Sbjct: 166 GAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLP-----KGDPERRRLL 218
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,619,919
Number of Sequences: 62578
Number of extensions: 557098
Number of successful extensions: 1669
Number of sequences better than 100.0: 183
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 1440
Number of HSP's gapped (non-prelim): 212
length of query: 465
length of database: 14,973,337
effective HSP length: 102
effective length of query: 363
effective length of database: 8,590,381
effective search space: 3118308303
effective search space used: 3118308303
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)